ORF_ID e_value Gene_name EC_number CAZy COGs KEGG_ko KEGG_Pathway BRITE Description
PDHDCJFA_00001 5.5e-262 ald 1.4.1.1 - C ko:K00259 ko00250,ko00430,ko01100,map00250,map00430,map01100 ko00000,ko00001,ko01000 Alanine dehydrogenase/PNT, N-terminal domain
PDHDCJFA_00003 1.1e-278 yghO - - K - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_00004 0.0 parE - - L ko:K02622 - ko00000,ko01000,ko02048,ko03032,ko03036 DNA topoisomerase (ATP-hydrolyzing)
PDHDCJFA_00005 7.73e-109 coaD 2.7.7.3 - H ko:K00954 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PDHDCJFA_00006 0.0 ctpA 3.4.21.102 - M ko:K03797 - ko00000,ko01000,ko01002 Belongs to the peptidase S41A family
PDHDCJFA_00007 1.1e-119 - - - P ko:K07240 - ko00000,ko02000 Chromate transporter
PDHDCJFA_00008 2.67e-124 - - - P ko:K07240 - ko00000,ko02000 Chromate transporter
PDHDCJFA_00009 1.4e-297 - - - MU ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 Outer membrane efflux protein
PDHDCJFA_00012 1.08e-101 rplQ - - J ko:K02879 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 50S ribosomal protein L17
PDHDCJFA_00013 1.01e-31 rpmD - - J ko:K02907 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 50S ribosomal protein L30
PDHDCJFA_00014 2.44e-94 rplO - - J ko:K02876 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 binds to the 23S rRNA
PDHDCJFA_00015 6.72e-61 - - - S - - - Domain of unknown function (DUF4491)
PDHDCJFA_00016 2.31e-27 - - - - - - - -
PDHDCJFA_00017 2.68e-73 - - - - - - - -
PDHDCJFA_00020 1.46e-262 - 2.7.13.3 - T ko:K11527 - ko00000,ko01000,ko01001,ko02022 His Kinase A (phosphoacceptor) domain
PDHDCJFA_00021 5.73e-17 ptk_3 - - DM - - - Chain length determinant protein
PDHDCJFA_00022 3.14e-222 mraY2 - - M - - - UDP-N-acetylmuramyl pentapeptide phosphotransferase
PDHDCJFA_00023 2.89e-21 mraY2 - - M - - - UDP-N-acetylmuramyl pentapeptide phosphotransferase
PDHDCJFA_00024 4.5e-119 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PDHDCJFA_00025 1.33e-33 - - - P ko:K08364 - ko00000,ko02000 Heavy-metal-associated domain
PDHDCJFA_00026 3.22e-48 bfmBAB 1.2.4.4 - C ko:K11381 ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130 br01601,ko00000,ko00001,ko00002,ko01000 dehydrogenase E1 component
PDHDCJFA_00027 1.47e-120 isiB - - C ko:K03839 - ko00000 Low-potential electron donor to a number of redox enzymes
PDHDCJFA_00028 2.99e-215 - - - S - - - Domain of unknonw function from B. Theta Gene description (DUF3874)
PDHDCJFA_00029 0.0 - - - P - - - Carboxypeptidase regulatory-like domain
PDHDCJFA_00030 8.58e-269 - - - N - - - COG NOG06100 non supervised orthologous group
PDHDCJFA_00031 1.71e-37 - - - S - - - MORN repeat variant
PDHDCJFA_00032 2.03e-97 hslR - - J ko:K04762 - ko00000,ko03110 S4 domain protein
PDHDCJFA_00033 6.57e-136 pth 3.1.1.29 - J ko:K01056 - ko00000,ko01000,ko03012 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PDHDCJFA_00034 1.72e-130 ctc - - J ko:K02897 ko03010,map03010 ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PDHDCJFA_00035 2.5e-189 - - - S ko:K07124 - ko00000 KR domain
PDHDCJFA_00036 1.12e-150 namA - - C - - - NADH:flavin oxidoreductase / NADH oxidase family
PDHDCJFA_00037 1.29e-254 hisS 6.1.1.21 - J ko:K01892 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 histidyl-tRNA synthetase
PDHDCJFA_00038 7.37e-138 - - - K - - - Bacterial regulatory proteins, tetR family
PDHDCJFA_00041 1.7e-132 - - - G ko:K16211 - ko00000,ko02000 MFS/sugar transport protein
PDHDCJFA_00042 3.77e-274 - - - M ko:K21572 - ko00000,ko02000 SusD family
PDHDCJFA_00043 0.0 nagB 3.5.99.6 - G ko:K02564 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 glucosamine-6-phosphate deaminase
PDHDCJFA_00044 1.09e-125 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PDHDCJFA_00045 1.52e-244 - - - PT - - - Domain of unknown function (DUF4974)
PDHDCJFA_00046 0.0 - - - H - - - TonB dependent receptor
PDHDCJFA_00047 0.0 - - - GM ko:K21572 - ko00000,ko02000 Pfam:SusD
PDHDCJFA_00048 2.31e-123 trmD 2.1.1.228 - J ko:K00554 - ko00000,ko01000,ko03016 Belongs to the RNA methyltransferase TrmD family
PDHDCJFA_00049 5.41e-78 - - - S - - - Protein of unknown function (DUF1573)
PDHDCJFA_00050 1.08e-273 - - - M - - - Linear amide C-N hydrolases, choloylglycine hydrolase family
PDHDCJFA_00051 2.46e-125 - - - S - - - COG NOG23390 non supervised orthologous group
PDHDCJFA_00052 6.55e-183 - - - L - - - Psort location OuterMembrane, score
PDHDCJFA_00053 1.89e-182 - - - C - - - radical SAM domain protein
PDHDCJFA_00054 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PDHDCJFA_00055 2.59e-134 - - - KT - - - COG3279 Response regulator of the LytR AlgR family
PDHDCJFA_00056 0.0 - - - P - - - Outer membrane protein beta-barrel family
PDHDCJFA_00057 1.17e-92 - - - S - - - Lipocalin-like domain
PDHDCJFA_00058 1.58e-92 ybaK - - S ko:K03976 - ko00000,ko01000,ko03016 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PDHDCJFA_00059 8.3e-79 - - - M - - - MBOAT, membrane-bound O-acyltransferase family
PDHDCJFA_00061 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
PDHDCJFA_00062 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
PDHDCJFA_00063 6.37e-253 - - - M ko:K02005 - ko00000 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDHDCJFA_00064 3.23e-306 - - - MU ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 Outer membrane efflux protein
PDHDCJFA_00065 5.65e-135 - - - E - - - Acetyltransferase (GNAT) domain
PDHDCJFA_00067 7.73e-101 - - - EG - - - EamA-like transporter family
PDHDCJFA_00068 1.7e-92 - - - S - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_00069 2.41e-298 aroA 2.5.1.19 - E ko:K00800 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PDHDCJFA_00070 3.75e-205 - 3.1.2.12 CE1 S ko:K01070 ko00680,ko01120,ko01200,map00680,map01120,map01200 ko00000,ko00001,ko01000 Putative esterase
PDHDCJFA_00071 0.0 - - - G - - - Glycosyl hydrolase family 92
PDHDCJFA_00072 0.0 - - - G - - - Glycosyl hydrolase family 92
PDHDCJFA_00073 3.54e-157 - - - V ko:K02003 - ko00000,ko00002,ko02000 bacteriocin export ABC transporter, lactococcin 972 group
PDHDCJFA_00074 5.57e-247 pheS 6.1.1.20 - J ko:K01889 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PDHDCJFA_00075 5.6e-243 porQ - - I - - - penicillin-binding protein
PDHDCJFA_00076 4.28e-258 - - - V ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
PDHDCJFA_00077 1.17e-124 - - - MU - - - Outer membrane efflux protein
PDHDCJFA_00078 5.4e-226 - - - S ko:K03646 - ko00000,ko02000 Domain of unknown function (DUF4468) with TBP-like fold
PDHDCJFA_00080 1.05e-210 ribF 2.7.1.26, 2.7.7.2 - H ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the ribF family
PDHDCJFA_00081 1.06e-257 argE 3.5.1.16 - E ko:K01438 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related
PDHDCJFA_00082 1.44e-292 - - - S - - - Polysaccharide biosynthesis protein
PDHDCJFA_00083 4.38e-102 - - - S - - - SNARE associated Golgi protein
PDHDCJFA_00084 1.54e-248 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDHDCJFA_00085 0.0 - 3.2.1.40 - G ko:K05989 - ko00000,ko01000 Bacterial alpha-L-rhamnosidase C-terminal domain
PDHDCJFA_00086 1.15e-88 purD 6.3.4.13 - F ko:K01945 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the GARS family
PDHDCJFA_00087 1.08e-224 moxR - - S ko:K03924 - ko00000,ko01000 ATPase family associated with various cellular activities (AAA)
PDHDCJFA_00088 1.22e-123 - - - E - - - Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PDHDCJFA_00089 3.51e-99 - - - S - - - ORF6N domain
PDHDCJFA_00090 8.57e-122 - - - S - - - ORF6N domain
PDHDCJFA_00094 6.99e-51 - - - S - - - Domain of unknown function (DUF5025)
PDHDCJFA_00095 6.13e-48 - - - O ko:K04653 - ko00000 HupF/HypC family
PDHDCJFA_00096 3.3e-201 - - - O ko:K04654 - ko00000 Hydrogenase formation hypA family
PDHDCJFA_00097 7.11e-245 czcC_2 - - MU ko:K15725 - ko00000,ko02000 Outer membrane efflux protein
PDHDCJFA_00098 1.85e-155 - - - I - - - CDP-alcohol phosphatidyltransferase
PDHDCJFA_00099 6.2e-177 - 1.2.1.21, 1.2.1.22 - C ko:K07248 ko00620,ko00630,ko01120,map00620,map00630,map01120 ko00000,ko00001,ko01000 Aldehyde dehydrogenase family
PDHDCJFA_00100 3.08e-55 dnaX 2.7.7.7 - H ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PDHDCJFA_00101 1.24e-216 nrd 1.17.4.1 - F ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen
PDHDCJFA_00102 1.87e-262 recD2_2 3.1.11.5 - L ko:K01144 - ko00000,ko01000 COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member
PDHDCJFA_00103 3.56e-26 gnd 1.1.1.343, 1.1.1.44 - G ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PDHDCJFA_00104 2.38e-108 merA - - C ko:K21739 - ko00000 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PDHDCJFA_00105 6.23e-123 - - - K - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_00106 0.0 - - - M - - - Outer membrane efflux protein
PDHDCJFA_00107 1.7e-169 - - - S - - - Virulence protein RhuM family
PDHDCJFA_00108 9e-61 - - - S ko:K09793 - ko00000 Protein of unknown function (DUF456)
PDHDCJFA_00109 1.72e-213 - - - CH - - - D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
PDHDCJFA_00110 0.0 maeB 1.1.1.38, 1.1.1.40 - C ko:K00027,ko:K00029 ko00620,ko00710,ko01100,ko01120,ko01200,ko02020,map00620,map00710,map01100,map01120,map01200,map02020 ko00000,ko00001,ko00002,ko01000 Malic enzyme
PDHDCJFA_00113 9.22e-217 mdh 1.1.1.37 - C ko:K00024 ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible oxidation of malate to oxaloacetate
PDHDCJFA_00115 1.02e-159 lpxA2 2.3.1.129 - M ko:K00677 ko00540,ko01100,ko01503,map00540,map01100,map01503 ko00000,ko00001,ko00002,ko01000,ko01005 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PDHDCJFA_00116 1.18e-308 - - - MU - - - Efflux transporter, outer membrane factor
PDHDCJFA_00117 1.04e-280 mexF - - V ko:K03296 - ko00000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDHDCJFA_00118 7.58e-98 - - - - - - - -
PDHDCJFA_00119 6.72e-75 - - - M - - - TonB family domain protein
PDHDCJFA_00120 1.72e-110 yajL 3.5.1.124 - S ko:K03152 - ko00000,ko01000,ko01002 Thiamine biosynthesis protein ThiJ
PDHDCJFA_00121 5.97e-238 cap5D - - GM - - - Polysaccharide biosynthesis protein
PDHDCJFA_00122 3.77e-187 - - - L - - - Arm DNA-binding domain
PDHDCJFA_00123 1.6e-216 thiD 2.7.1.49, 2.7.4.7 - K ko:K00941 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 transcriptional regulator (AraC family)
PDHDCJFA_00124 3.24e-248 bioF 2.3.1.29, 2.3.1.47 - E ko:K00639,ko:K00652 ko00260,ko00780,ko01100,map00260,map00780,map01100 ko00000,ko00001,ko00002,ko01000,ko01007 2-amino-3-ketobutyrate CoA ligase
PDHDCJFA_00125 2.03e-246 rpoB 2.7.7.6 - K ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDHDCJFA_00127 3.01e-164 yeaZ - - O ko:K14742 - ko00000,ko03016 Universal bacterial protein YeaZ
PDHDCJFA_00128 4.47e-75 - - - S - - - Domain of unknown function (DUF4469) with IG-like fold
PDHDCJFA_00129 2.04e-230 - - - M - - - Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDHDCJFA_00130 2.46e-115 - - - S - - - Tetratricopeptide repeats
PDHDCJFA_00131 1.46e-45 mazG 3.6.1.66 - S ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like
PDHDCJFA_00132 3.97e-102 - - - S - - - COG NOG28735 non supervised orthologous group
PDHDCJFA_00133 4.08e-73 - - - S - - - COG NOG23405 non supervised orthologous group
PDHDCJFA_00134 5.85e-128 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PDHDCJFA_00137 1.98e-194 xapA 2.4.2.1 - F ko:K03783 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
PDHDCJFA_00138 2.34e-304 mtaD 3.5.4.28, 3.5.4.31 - F ko:K12960 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine
PDHDCJFA_00139 0.0 dapE - - E - - - peptidase
PDHDCJFA_00140 1.29e-280 - - - S - - - Acyltransferase family
PDHDCJFA_00141 1.38e-167 - - - S - - - Enoyl-(Acyl carrier protein) reductase
PDHDCJFA_00142 3.38e-76 - - - S - - - Protein of unknown function (DUF3795)
PDHDCJFA_00143 1.35e-174 - - - A - - - Domain of Unknown Function (DUF349)
PDHDCJFA_00145 1.7e-45 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDHDCJFA_00146 5.96e-260 tyrS 6.1.1.1 - J ko:K01866 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PDHDCJFA_00147 0.0 gldK - - M - - - gliding motility-associated lipoprotein GldK
PDHDCJFA_00148 3.46e-191 gldL - - S - - - Gliding motility-associated protein, GldL
PDHDCJFA_00149 0.0 gldM - - S - - - Gliding motility-associated protein GldM
PDHDCJFA_00150 7.1e-235 gldN - - S - - - Gliding motility-associated protein GldN
PDHDCJFA_00151 9.2e-88 - - - S - - - Acetyltransferase (GNAT) domain
PDHDCJFA_00152 1.75e-276 - - - S ko:K07148 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PDHDCJFA_00153 6.68e-238 - - - S - - - Carbon-nitrogen hydrolase
PDHDCJFA_00154 1.94e-109 - 3.5.1.28 - V ko:K01447 - ko00000,ko01000 Ami_2
PDHDCJFA_00155 0.0 - - - P - - - Outer membrane protein beta-barrel family
PDHDCJFA_00156 1.35e-126 marC - - U ko:K05595 - ko00000,ko02000 UPF0056 membrane protein
PDHDCJFA_00157 0.0 ybeZ_1 - - T ko:K07175 - ko00000 Phosphate starvation protein PhoH
PDHDCJFA_00158 2.21e-90 - 1.5.1.40 - S ko:K06988 - ko00000,ko01000 Antibiotic biosynthesis monooxygenase
PDHDCJFA_00159 1.17e-13 - - - S - - - Domain of unknown function (DUF4925)
PDHDCJFA_00160 8.12e-242 lptG - - S ko:K11720 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Permease, YjgP YjgQ family
PDHDCJFA_00161 5.84e-124 tgt 2.4.2.29 - F ko:K00773 - ko00000,ko01000,ko03016 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PDHDCJFA_00162 1.51e-157 mnmC - - S - - - S-adenosyl-L-methionine-dependent methyltransferase
PDHDCJFA_00163 6.22e-72 trxA - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Belongs to the thioredoxin family
PDHDCJFA_00164 2.13e-227 cydB 1.10.3.14 - C ko:K00426 ko00190,ko01100,ko02020,map00190,map01100,map02020 ko00000,ko00001,ko00002,ko01000 Cytochrome C oxidase assembly protein
PDHDCJFA_00165 0.0 - - - S - - - Peptidase family M28
PDHDCJFA_00166 8.98e-224 rnz 3.1.26.11 - S ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PDHDCJFA_00167 1.1e-29 - - - - - - - -
PDHDCJFA_00168 0.0 - - - - - - - -
PDHDCJFA_00169 1.28e-239 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
PDHDCJFA_00170 1.1e-154 - - - M - - - group 1 family protein
PDHDCJFA_00171 1.6e-266 - - - K - - - Putative ATP-dependent DNA helicase recG C-terminal
PDHDCJFA_00172 3.02e-176 - - - M - - - Glycosyl transferase family 2
PDHDCJFA_00173 0.0 - - - S - - - membrane
PDHDCJFA_00174 2.18e-59 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 phosphate transport system permease
PDHDCJFA_00175 2.14e-179 pstB 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PDHDCJFA_00176 1.52e-205 - - - S - - - Protein of unknown function (DUF1573)
PDHDCJFA_00177 2.57e-60 rplL - - J ko:K02935 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PDHDCJFA_00178 4.47e-115 rplJ - - J ko:K02864 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PDHDCJFA_00179 3.53e-160 rplA - - J ko:K02863 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PDHDCJFA_00180 1.48e-99 rplK - - J ko:K02867 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PDHDCJFA_00181 5.86e-122 nusG - - K ko:K02601 - ko00000,ko03009,ko03021 Participates in transcription elongation, termination and antitermination
PDHDCJFA_00182 8.1e-36 secE - - U ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PDHDCJFA_00184 1.37e-289 tuf - - J ko:K02358 - ko00000,ko03012,ko03029,ko04147 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PDHDCJFA_00188 1.28e-113 ribH 2.5.1.78 - H ko:K00794 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PDHDCJFA_00189 0.0 - - - T - - - His Kinase A (phosphoacceptor) domain
PDHDCJFA_00190 0.0 cap - - S - - - Polysaccharide biosynthesis protein
PDHDCJFA_00191 4.75e-241 ruvB 3.6.4.12 - L ko:K03551 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PDHDCJFA_00192 1.25e-283 - - - S - - - 6-bladed beta-propeller
PDHDCJFA_00193 0.0 - - - S - - - Predicted AAA-ATPase
PDHDCJFA_00194 4.25e-31 - - - S - - - Domain of unknown function (DUF4248)
PDHDCJFA_00195 3.34e-107 - - - L - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_00196 2.11e-264 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
PDHDCJFA_00197 5.98e-37 - - - S - - - Psort location Cytoplasmic, score
PDHDCJFA_00198 3.65e-133 yvqK 2.5.1.17 - S ko:K00798 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 adenosyltransferase
PDHDCJFA_00199 2.12e-73 thiL 2.7.4.16 - H ko:K00946 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
PDHDCJFA_00200 2.93e-145 - - - - - - - -
PDHDCJFA_00203 5.33e-49 - - - S - - - phosphatase activity
PDHDCJFA_00205 1.43e-239 - 2.7.13.3 - T ko:K02484,ko:K07636 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
PDHDCJFA_00211 8.86e-244 tsaD 2.3.1.234 - O ko:K01409 - ko00000,ko01000,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PDHDCJFA_00212 1.76e-122 cinA 3.5.1.42 - S ko:K03742,ko:K03743 ko00760,map00760 ko00000,ko00001,ko01000 Belongs to the CinA family
PDHDCJFA_00213 0.0 - - - E - - - N-terminus of Esterase_SGNH_hydro-type
PDHDCJFA_00214 3.25e-85 - - - O - - - F plasmid transfer operon protein
PDHDCJFA_00215 0.0 nanH 3.2.1.18 GH33 G ko:K01186 ko00511,ko00600,ko04142,map00511,map00600,map04142 ko00000,ko00001,ko01000,ko02042 N-terminal domain of BNR-repeat neuraminidase
PDHDCJFA_00216 0.0 - - - GM ko:K21572 - ko00000,ko02000 Pfam:SusD
PDHDCJFA_00217 0.0 - - - P - - - TonB dependent receptor
PDHDCJFA_00218 1.14e-288 - - - G ko:K08191 - ko00000,ko02000 Major Facilitator Superfamily
PDHDCJFA_00220 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
PDHDCJFA_00221 0.0 - - - P - - - TonB-dependent receptor plug domain
PDHDCJFA_00222 0.0 lacZ_17 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PDHDCJFA_00223 2.14e-189 tatD - - L ko:K03424 - ko00000,ko01000 hydrolase, TatD
PDHDCJFA_00226 0.0 - - - H - - - COG NOG08812 non supervised orthologous group
PDHDCJFA_00227 0.0 - - - S - - - PFAM Uncharacterised BCR, COG1649
PDHDCJFA_00228 0.0 - - - V - - - AcrB/AcrD/AcrF family
PDHDCJFA_00229 3.69e-199 - - - MU - - - Outer membrane efflux protein
PDHDCJFA_00230 1.01e-223 - - - L - - - COG NOG11942 non supervised orthologous group
PDHDCJFA_00232 5.88e-89 mscL - - M ko:K03282 - ko00000,ko02000 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PDHDCJFA_00233 6.74e-112 - - - O - - - Thioredoxin-like
PDHDCJFA_00234 8.76e-167 - - - - - - - -
PDHDCJFA_00235 0.0 pepP 3.4.11.9 - E ko:K01262 - ko00000,ko01000,ko01002 Aminopeptidase P, N-terminal domain
PDHDCJFA_00236 2.64e-75 - - - K - - - DRTGG domain
PDHDCJFA_00237 1.02e-94 - - - T - - - Histidine kinase-like ATPase domain
PDHDCJFA_00238 0.0 - - - C - - - Iron only hydrogenase large subunit, C-terminal domain
PDHDCJFA_00239 3.2e-76 - - - K - - - DRTGG domain
PDHDCJFA_00240 3.16e-180 - - - S - - - DNA polymerase alpha chain like domain
PDHDCJFA_00241 1.15e-122 - - - T - - - Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PDHDCJFA_00242 4.24e-289 - - - S - - - Tetratricopeptide repeat protein
PDHDCJFA_00243 1.18e-205 - - - P - - - membrane
PDHDCJFA_00245 0.0 ramA_2 - - S - - - Carbon-nitrogen hydrolase
PDHDCJFA_00246 0.0 - - - G - - - Alpha-L-arabinofuranosidase C-terminal domain
PDHDCJFA_00247 1.95e-78 - - - T - - - cheY-homologous receiver domain
PDHDCJFA_00248 5.84e-273 - - - M - - - Bacterial sugar transferase
PDHDCJFA_00249 8.95e-176 - - - MU - - - Outer membrane efflux protein
PDHDCJFA_00250 2.57e-259 - 2.4.1.319, 2.4.1.320 - G ko:K18785 - ko00000,ko01000 beta-1,4-mannooligosaccharide phosphorylase
PDHDCJFA_00251 1.4e-99 - - - L - - - regulation of translation
PDHDCJFA_00252 1.14e-15 - - - S - - - Domain of unknown function (DUF4248)
PDHDCJFA_00254 1.73e-142 ribE 2.5.1.9 - H ko:K00793 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 riboflavin synthase subunit alpha
PDHDCJFA_00255 1.89e-213 queA 2.4.99.17 - J ko:K07568 - ko00000,ko01000,ko03016 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PDHDCJFA_00256 5.85e-243 - - - S - - - Peptide transporter
PDHDCJFA_00257 0.0 lytB - - D ko:K06381 - ko00000 Stage II sporulation protein
PDHDCJFA_00258 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
PDHDCJFA_00259 0.0 - 3.1.3.5, 3.6.1.45 - F ko:K11751 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the 5'-nucleotidase family
PDHDCJFA_00261 2.97e-289 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
PDHDCJFA_00262 5.46e-94 - - - L - - - Endonuclease/Exonuclease/phosphatase family
PDHDCJFA_00263 5.48e-71 - - - L - - - Endonuclease/Exonuclease/phosphatase family
PDHDCJFA_00264 0.0 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
PDHDCJFA_00265 1.16e-188 - - - G - - - Xylose isomerase-like TIM barrel
PDHDCJFA_00266 0.0 lon 3.4.21.53 - O ko:K01338 ko04112,map04112 ko00000,ko00001,ko01000,ko01002 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
PDHDCJFA_00267 3.19e-123 hemN - - H - - - Involved in the biosynthesis of porphyrin-containing compound
PDHDCJFA_00268 6.08e-136 - - - M - - - non supervised orthologous group
PDHDCJFA_00269 4.69e-230 tldD3 - - S ko:K03592 - ko00000,ko01002 Putative modulator of DNA gyrase
PDHDCJFA_00270 6.17e-281 hflX - - S ko:K03665 - ko00000,ko03009 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PDHDCJFA_00271 0.0 - - - G - - - Domain of unknown function (DUF4954)
PDHDCJFA_00272 8.89e-214 - - - K - - - transcriptional regulator (AraC family)
PDHDCJFA_00273 1.38e-136 - 5.3.1.9 - G ko:K06859 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Glucose-6-phosphate isomerase (GPI)
PDHDCJFA_00274 2.5e-233 - 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
PDHDCJFA_00275 5.97e-201 - 5.3.1.9 - G ko:K06859 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Glucose-6-phosphate isomerase (GPI)
PDHDCJFA_00276 0.0 malQ 2.4.1.25 GH77 G ko:K00705 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 4-alpha-glucanotransferase
PDHDCJFA_00277 2.48e-57 - - - M - - - Integral membrane protein CcmA involved in cell shape determination
PDHDCJFA_00278 2.65e-81 folB 1.13.11.81, 4.1.2.25, 5.1.99.8 - H ko:K01633 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PDHDCJFA_00279 0.0 - - - C - - - Hydrogenase
PDHDCJFA_00280 1.88e-313 - - - S - - - Peptide-N-glycosidase F, N terminal
PDHDCJFA_00281 7.12e-142 - - - U ko:K05595 - ko00000,ko02000 MarC family integral membrane protein
PDHDCJFA_00282 5.64e-125 - - - S - - - Transposase
PDHDCJFA_00283 2.13e-225 purL 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate
PDHDCJFA_00284 2.37e-172 - - - - - - - -
PDHDCJFA_00287 3.13e-136 menA 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the MenA family. Type 1 subfamily
PDHDCJFA_00288 1.24e-235 iaaA 3.4.19.5 - E ko:K13051 - ko00000,ko01000,ko01002 Asparaginase
PDHDCJFA_00289 1.46e-197 - - - I - - - Carboxylesterase family
PDHDCJFA_00290 1.94e-242 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
PDHDCJFA_00292 1.16e-265 - - - J - - - (SAM)-dependent
PDHDCJFA_00293 0.0 - - - T - - - His Kinase A (phosphoacceptor) domain
PDHDCJFA_00294 5.04e-302 LYS1 1.5.1.7 - E ko:K00290 ko00300,ko00310,ko01100,ko01110,ko01130,ko01230,map00300,map00310,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Saccharopine dehydrogenase
PDHDCJFA_00295 1.25e-107 bcp 1.11.1.15 - O ko:K03564 - ko00000,ko01000 Thiol peroxidase
PDHDCJFA_00296 1.26e-244 recA - - L ko:K03553 ko03440,map03440 ko00000,ko00001,ko00002,ko03400 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PDHDCJFA_00299 3.98e-143 - - - C - - - Nitroreductase family
PDHDCJFA_00300 2.64e-18 lktB - - V ko:K06147 - ko00000,ko02000 ABC transporter, ATP-binding protein
PDHDCJFA_00301 5.05e-258 - - - S ko:K07098 - ko00000 Calcineurin-like phosphoesterase superfamily domain
PDHDCJFA_00302 1.01e-294 - - - S ko:K07098 - ko00000 Ser Thr phosphatase family protein
PDHDCJFA_00303 8.02e-232 prc 3.4.21.102 - M ko:K03797 - ko00000,ko01000,ko01002 Belongs to the peptidase S41A family
PDHDCJFA_00305 0.0 recG 3.6.4.12 - L ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PDHDCJFA_00306 1.69e-167 ispD 2.7.7.60 - I ko:K00991 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
PDHDCJFA_00307 1.02e-34 xseB 3.1.11.6 - L ko:K03602 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDHDCJFA_00308 1.03e-286 xseA 3.1.11.6 - L ko:K03601 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDHDCJFA_00309 0.0 aprN - - O - - - Subtilase family
PDHDCJFA_00310 2.32e-109 asnC - - K ko:K03718 - ko00000,ko03000 Transcriptional regulator
PDHDCJFA_00311 6.87e-154 fkpB 5.2.1.8 - M ko:K03772,ko:K03773 - ko00000,ko01000,ko03110 peptidyl-prolyl cis-trans isomerase
PDHDCJFA_00312 3.04e-240 pgi 5.3.1.9 - G ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GPI family
PDHDCJFA_00314 1.19e-78 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
PDHDCJFA_00315 1.87e-170 - - - KT ko:K02477 - ko00000,ko02022 COG3279 Response regulator of the LytR AlgR family
PDHDCJFA_00316 1.63e-264 - - - T - - - Histidine kinase
PDHDCJFA_00317 0.0 - - - KT - - - response regulator
PDHDCJFA_00318 0.0 - - - P - - - Psort location OuterMembrane, score
PDHDCJFA_00319 1.3e-47 - - - S - - - Protein of unknown function (DUF3791)
PDHDCJFA_00320 1.66e-122 - - - S - - - Protein of unknown function (DUF3990)
PDHDCJFA_00321 4.26e-69 - - - S - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_00322 1.97e-47 - - - L - - - Belongs to the 'phage' integrase family
PDHDCJFA_00323 2.2e-296 - - - S - - - Protein of unknown function (DUF1343)
PDHDCJFA_00324 0.0 - - - E - - - Dipeptidyl peptidase IV (DPP IV) N-terminal region
PDHDCJFA_00325 4.85e-130 - - - T ko:K06950 - ko00000 HDIG domain protein
PDHDCJFA_00326 0.0 - - - M - - - Psort location OuterMembrane, score
PDHDCJFA_00328 2.65e-100 - 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 glycosyl hydrolase, family 3
PDHDCJFA_00329 5.12e-119 - - - S - - - GlcNAc-PI de-N-acetylase
PDHDCJFA_00330 2.34e-305 - - - M - - - Glycosyltransferase Family 4
PDHDCJFA_00331 7.38e-281 - - - M - - - transferase activity, transferring glycosyl groups
PDHDCJFA_00332 8.24e-248 prmA 2.1.1.222, 2.1.1.64 - J ko:K00568,ko:K02687 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko03009 protein methyltransferase activity
PDHDCJFA_00333 8.48e-96 folK2 2.7.6.3 - H ko:K00950 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
PDHDCJFA_00334 1.32e-111 - - - - - - - -
PDHDCJFA_00336 3.37e-112 - - - S ko:K07133 - ko00000 ATPase (AAA superfamily)
PDHDCJFA_00337 5.34e-71 - - - S - - - Domain of unknown function (DUF4120)
PDHDCJFA_00338 3.11e-121 - - - S - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_00339 3.09e-60 - - - - - - - -
PDHDCJFA_00340 5.86e-60 - - - - - - - -
PDHDCJFA_00341 2.06e-130 - - - S - - - Domain of unknown function (DUF4326)
PDHDCJFA_00342 1.27e-199 - - - U - - - COG COG3505 Type IV secretory pathway, VirD4 components
PDHDCJFA_00343 0.0 - - - L - - - COG COG3344 Retron-type reverse transcriptase
PDHDCJFA_00344 1.21e-249 - - - U - - - COG COG3505 Type IV secretory pathway, VirD4 components
PDHDCJFA_00345 1.23e-129 rbr3A - - C - - - Rubrerythrin
PDHDCJFA_00347 3.7e-201 - - - L - - - DNA binding domain, excisionase family
PDHDCJFA_00349 1.91e-38 - - - K - - - transcriptional regulator, y4mF family
PDHDCJFA_00350 3.23e-75 - 2.7.11.1 - S ko:K07154 - ko00000,ko01000,ko01001,ko02048 HipA N-terminal domain
PDHDCJFA_00351 6.64e-201 - 2.7.11.1 - S ko:K07154 - ko00000,ko01000,ko01001,ko02048 Pfam:HipA_N
PDHDCJFA_00353 8.21e-55 - - - - - - - -
PDHDCJFA_00355 1.95e-144 - - - S - - - Calcineurin-like phosphoesterase superfamily domain
PDHDCJFA_00356 3.78e-226 - - - S - - - Calcineurin-like phosphoesterase
PDHDCJFA_00357 2.72e-175 - - - P - - - TonB-dependent Receptor Plug Domain
PDHDCJFA_00358 1.31e-109 - - - S ko:K02651 ko04112,map04112 ko00000,ko00001,ko02035,ko02044 COG NOG28004 non supervised orthologous group
PDHDCJFA_00359 5.82e-68 rseP - - M ko:K11749 ko02024,ko04112,map02024,map04112 ko00000,ko00001,ko01000,ko01002 zinc metalloprotease
PDHDCJFA_00360 4.6e-220 - - - L - - - Belongs to the 'phage' integrase family
PDHDCJFA_00363 0.0 gltX 6.1.1.17 - J ko:K01885 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PDHDCJFA_00364 0.0 - - - S ko:K07037 - ko00000 7TM receptor with intracellular HD hydrolase
PDHDCJFA_00365 4.95e-115 ptpA 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PDHDCJFA_00366 0.0 priA - - L ko:K04066 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PDHDCJFA_00367 1.84e-313 - - - S - - - Major fimbrial subunit protein (FimA)
PDHDCJFA_00368 1.09e-314 - - - S - - - Major fimbrial subunit protein (FimA)
PDHDCJFA_00369 6.61e-07 - - - S - - - PD-(D/E)XK nuclease family transposase
PDHDCJFA_00370 1.15e-42 - - - S - - - PD-(D/E)XK nuclease family transposase
PDHDCJFA_00371 4.11e-43 - - - L - - - Phage integrase family
PDHDCJFA_00372 8.03e-296 - - - L - - - Belongs to the 'phage' integrase family
PDHDCJFA_00373 0.0 - - - P - - - Carboxypeptidase regulatory-like domain
PDHDCJFA_00374 1.55e-29 - - - P - - - Carboxypeptidase regulatory-like domain
PDHDCJFA_00375 0.0 - - - L - - - COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member
PDHDCJFA_00376 8.77e-212 - - - O - - - prohibitin homologues
PDHDCJFA_00377 1.95e-150 - - - S ko:K01163 - ko00000 Uncharacterised conserved protein (DUF2156)
PDHDCJFA_00378 3.96e-226 - - - S - - - Acetyltransferase (GNAT) domain
PDHDCJFA_00379 6.83e-53 - - - S - - - COG NOG06028 non supervised orthologous group
PDHDCJFA_00381 5.38e-307 - - - T ko:K07713 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains
PDHDCJFA_00382 1.1e-185 - - - S ko:K07148 - ko00000 Protein of unknown function (DUF418)
PDHDCJFA_00383 0.0 - - - V ko:K03296 - ko00000 AcrB/AcrD/AcrF family
PDHDCJFA_00384 2.35e-250 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDHDCJFA_00385 1.24e-203 thiD 2.7.1.49, 2.7.4.7 - K ko:K00941 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 helix_turn_helix, arabinose operon control protein
PDHDCJFA_00386 5.99e-240 - - - U - - - Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PDHDCJFA_00387 3.44e-152 rnhA 3.1.26.4 - L ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Ribonuclease H
PDHDCJFA_00388 8.46e-198 - - - G - - - Polysaccharide deacetylase
PDHDCJFA_00389 5.65e-169 - - - M - - - Glycosyl transferase family 2
PDHDCJFA_00390 4.37e-285 - - - M - - - Psort location CytoplasmicMembrane, score 10.00
PDHDCJFA_00391 0.0 - - - S - - - amine dehydrogenase activity
PDHDCJFA_00392 3.18e-118 aroK 2.7.1.71 - F ko:K00891 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PDHDCJFA_00393 9.01e-278 - - - M - - - Glycosyltransferase Family 4
PDHDCJFA_00394 0.0 ahcY 3.3.1.1 - H ko:K01251 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko00002,ko01000,ko01009,ko04147 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
PDHDCJFA_00395 1.24e-156 - - - IQ - - - KR domain
PDHDCJFA_00396 6.18e-199 - - - K - - - AraC family transcriptional regulator
PDHDCJFA_00397 0.0 - - - IQ ko:K00666 - ko00000,ko01000,ko01004 AMP-binding enzyme C-terminal domain
PDHDCJFA_00398 8.21e-133 - - - K - - - Helix-turn-helix domain
PDHDCJFA_00399 5.91e-158 nth 4.2.99.18 - L ko:K10773 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PDHDCJFA_00400 0.0 - 3.2.1.35 - G ko:K01197 ko00531,ko01100,map00531,map01100 ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042 beta-N-acetylglucosaminidase
PDHDCJFA_00401 4.2e-297 - - - E - - - Domain of Unknown Function with PDB structure (DUF3858)
PDHDCJFA_00402 4.2e-255 - - - E - - - Domain of Unknown Function with PDB structure (DUF3857)
PDHDCJFA_00403 6.36e-108 - - - O - - - Thioredoxin
PDHDCJFA_00404 4.99e-78 - - - S - - - CGGC
PDHDCJFA_00405 7.08e-99 rpsP - - J ko:K02959 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bS16 family
PDHDCJFA_00407 0.0 - - - S ko:K06158 - ko00000,ko03012 glycosyl transferase family 2
PDHDCJFA_00408 0.0 - - - M - - - Domain of unknown function (DUF3943)
PDHDCJFA_00409 1.4e-138 yadS - - S - - - membrane
PDHDCJFA_00410 9.78e-261 ansA 3.5.1.1 - EJ ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 ko00000,ko00001,ko01000 L-asparaginase, type I
PDHDCJFA_00411 3.16e-18 - - - - - - - -
PDHDCJFA_00412 1.42e-217 - - - G - - - pfkB family carbohydrate kinase
PDHDCJFA_00413 8.02e-277 - - - G - - - Major Facilitator Superfamily
PDHDCJFA_00414 3.25e-210 - - - P - - - Outer membrane protein beta-barrel family
PDHDCJFA_00415 8.46e-21 - - - P - - - Outer membrane protein beta-barrel family
PDHDCJFA_00416 8.37e-61 pchR - - K - - - transcriptional regulator
PDHDCJFA_00417 0.0 - - - L - - - Helicase associated domain protein
PDHDCJFA_00418 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDHDCJFA_00419 9.33e-310 - - - T ko:K07713 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Sigma-54 interaction domain
PDHDCJFA_00420 1.31e-97 - - - H - - - Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PDHDCJFA_00421 8.6e-118 - - - U - - - YWFCY protein
PDHDCJFA_00422 8.45e-283 purT 2.1.2.2 - F ko:K08289 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PDHDCJFA_00423 0.0 - - - U - - - WD40-like Beta Propeller Repeat
PDHDCJFA_00424 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDHDCJFA_00425 7.85e-281 - - - U - - - WD40-like Beta Propeller Repeat
PDHDCJFA_00427 1.08e-249 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDHDCJFA_00428 0.0 bepE_4 - - V ko:K03296,ko:K18138 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDHDCJFA_00429 2.31e-312 tolC - - MU - - - Outer membrane efflux protein
PDHDCJFA_00430 0.0 - - - T - - - His Kinase A (phosphoacceptor) domain
PDHDCJFA_00431 0.0 - - - T - - - His Kinase A (phosphoacceptor) domain
PDHDCJFA_00432 1.62e-158 - - - T - - - COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PDHDCJFA_00433 2.17e-56 - - - S - - - TSCPD domain
PDHDCJFA_00434 1.56e-269 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the folylpolyglutamate synthase family
PDHDCJFA_00436 1.03e-121 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PDHDCJFA_00437 7.95e-225 - - - PT - - - Domain of unknown function (DUF4974)
PDHDCJFA_00438 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDHDCJFA_00439 1.24e-64 - - - I - - - Acyltransferase family
PDHDCJFA_00440 1.82e-51 - - - S - - - Protein of unknown function DUF86
PDHDCJFA_00441 7.29e-61 - - - S ko:K07075 - ko00000 Nucleotidyltransferase domain
PDHDCJFA_00442 3.78e-117 - - - K - - - BRO family, N-terminal domain
PDHDCJFA_00443 0.0 - - - S - - - ABC transporter, ATP-binding protein
PDHDCJFA_00444 0.0 ltaS2 - - M - - - Sulfatase
PDHDCJFA_00446 0.0 - - - S - - - PS-10 peptidase S37
PDHDCJFA_00447 3.72e-223 queG 1.17.99.6 - C ko:K18979 - ko00000,ko01000,ko03016 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PDHDCJFA_00448 2.86e-156 pgdA_1 - - G - - - polysaccharide deacetylase
PDHDCJFA_00449 0.0 - - - EG - - - Protein of unknown function (DUF2723)
PDHDCJFA_00450 2.11e-213 fbaB 4.1.2.13 - G ko:K11645 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 DeoC/LacD family aldolase
PDHDCJFA_00451 0.0 pop - - EU - - - peptidase
PDHDCJFA_00452 5.37e-107 - - - D - - - cell division
PDHDCJFA_00453 9.48e-204 - 2.7.1.4 - G ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 ko00000,ko00001,ko01000 pfkB family
PDHDCJFA_00454 0.0 - - - T - - - Periplasmic binding proteins and sugar binding domain of LacI family
PDHDCJFA_00455 0.0 - - - P - - - TonB dependent receptor
PDHDCJFA_00456 0.0 sprA - - S - - - Motility related/secretion protein
PDHDCJFA_00457 0.0 - - - H - - - Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX
PDHDCJFA_00458 1.84e-187 - - - - - - - -
PDHDCJFA_00459 0.0 - - - S - - - homolog of phage Mu protein gp47
PDHDCJFA_00460 1.16e-111 phoH - - T ko:K06217 - ko00000 Phosphate starvation protein PhoH
PDHDCJFA_00461 4.48e-230 purC 6.3.2.6 - F ko:K01923 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis
PDHDCJFA_00462 1.34e-176 menG 2.1.1.163, 2.1.1.201 - H ko:K03183 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PDHDCJFA_00463 3.42e-179 aroE 1.1.1.25 - E ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Shikimate
PDHDCJFA_00464 1.35e-146 sfp - - H - - - Belongs to the P-Pant transferase superfamily
PDHDCJFA_00465 5.15e-136 gldD - - S - - - Gliding motility-associated lipoprotein GldD
PDHDCJFA_00466 1.88e-308 gldE - - S - - - gliding motility-associated protein GldE
PDHDCJFA_00467 4.54e-116 ssb - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Single-stranded DNA-binding protein
PDHDCJFA_00468 2.68e-72 mutY - - L ko:K03575 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 A G-specific adenine glycosylase
PDHDCJFA_00469 0.0 - - - E ko:K03312 - ko00000,ko02000 Sodium/glutamate symporter
PDHDCJFA_00470 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
PDHDCJFA_00471 2.86e-07 - - - V ko:K02003 - ko00000,ko00002,ko02000 bacteriocin export ABC transporter, lactococcin 972 group
PDHDCJFA_00472 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
PDHDCJFA_00473 5.89e-91 - 3.1.6.1 - P ko:K01130 ko00140,ko00600,map00140,map00600 ko00000,ko00001,ko01000 Sulfatase
PDHDCJFA_00474 1.05e-293 sufS 2.8.1.7, 4.4.1.16 - E ko:K11717 ko00450,ko01100,map00450,map01100 ko00000,ko00001,ko01000 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PDHDCJFA_00475 2.8e-76 fjo27 - - S - - - VanZ like family
PDHDCJFA_00476 2.35e-144 rnhB 3.1.26.4 - L ko:K03470 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDHDCJFA_00477 2.91e-94 sufE - - S ko:K02426 - ko00000 Fe-S metabolism
PDHDCJFA_00478 4.74e-243 - - - S - - - Glutamine cyclotransferase
PDHDCJFA_00479 0.0 - 3.4.13.19 - E ko:K01273,ko:K01274 - ko00000,ko00537,ko01000,ko01002,ko04147 Membrane dipeptidase (Peptidase family M19)
PDHDCJFA_00480 0.0 - - - S - - - Peptidase family M28
PDHDCJFA_00481 1.14e-76 - - - - - - - -
PDHDCJFA_00482 1.68e-254 - - - M ko:K15727 - ko00000,ko02000 Barrel-sandwich domain of CusB or HlyD membrane-fusion
PDHDCJFA_00483 0.0 - - - P ko:K15726 - ko00000,ko02000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDHDCJFA_00484 2.64e-229 - - - M ko:K08676 - ko00000,ko01000,ko01002 Tricorn protease homolog
PDHDCJFA_00485 9.4e-133 - 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
PDHDCJFA_00486 2.28e-242 sstT - - U - - - Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PDHDCJFA_00487 0.0 nhaC - - C ko:K03315 - ko00000,ko02000 Na+/H+ antiporter family
PDHDCJFA_00488 0.0 nhaC - - C ko:K03315 - ko00000,ko02000 Na+/H+ antiporter family
PDHDCJFA_00493 2.05e-294 ugd 1.1.1.22 - M ko:K00012 ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PDHDCJFA_00494 2.16e-262 rfbB 4.2.1.46 - M ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 ko00000,ko00001,ko00002,ko01000 dTDP-glucose 4,6-dehydratase activity
PDHDCJFA_00495 2.32e-160 rfbD 1.1.1.133 - M ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PDHDCJFA_00496 2.51e-115 rfbC 5.1.3.13 - G ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PDHDCJFA_00497 7.62e-175 rfbA 2.7.7.24 - H ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PDHDCJFA_00499 1.27e-111 - - - S - - - Putative auto-transporter adhesin, head GIN domain
PDHDCJFA_00500 5.39e-146 - - - S - - - Putative auto-transporter adhesin, head GIN domain
PDHDCJFA_00501 8.33e-183 - - - S - - - Putative auto-transporter adhesin, head GIN domain
PDHDCJFA_00502 2.39e-184 - - - S - - - Putative auto-transporter adhesin, head GIN domain
PDHDCJFA_00503 3.94e-248 - 5.1.3.2 - GM ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 NAD dependent epimerase dehydratase family protein
PDHDCJFA_00504 2.78e-22 znuC - - P ko:K09817 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PDHDCJFA_00505 5.66e-181 znuC - - P ko:K09817 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PDHDCJFA_00507 6.4e-143 - - - S - - - Lipopolysaccharide-assembly, LptC-related
PDHDCJFA_00508 0.0 - - - S - - - Tetratricopeptide repeat protein
PDHDCJFA_00509 9.36e-313 - - - I - - - Psort location OuterMembrane, score
PDHDCJFA_00510 4.85e-193 coaX 2.7.1.33 - F ko:K03525 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PDHDCJFA_00511 5.97e-242 yhiM - - S - - - Protein of unknown function (DUF2776)
PDHDCJFA_00512 1.33e-80 - - - H - - - Outer membrane protein beta-barrel family
PDHDCJFA_00513 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter, ATP-binding protein
PDHDCJFA_00514 2.93e-36 - - - V - - - PFAM secretion protein HlyD family protein
PDHDCJFA_00515 5.01e-299 - - - NU - - - Lipid A 3-O-deacylase (PagL)
PDHDCJFA_00516 1.27e-293 agcS - - E ko:K03310 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PDHDCJFA_00517 0.0 porU - - S - - - Peptidase family C25
PDHDCJFA_00518 2.91e-277 porV - - I - - - Psort location OuterMembrane, score
PDHDCJFA_00519 1.88e-111 ispF 4.6.1.12 - I ko:K01770 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
PDHDCJFA_00520 0.0 - - - T - - - His Kinase A (phosphoacceptor) domain
PDHDCJFA_00521 1e-117 - - - M - - - Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDHDCJFA_00522 0.0 - - - V - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDHDCJFA_00523 1.3e-301 - - - MU - - - Psort location OuterMembrane, score
PDHDCJFA_00524 2.08e-241 - - - T - - - Histidine kinase
PDHDCJFA_00525 1.06e-257 aguA 3.5.3.12 - E ko:K10536 ko00330,ko01100,map00330,map01100 ko00000,ko00001,ko01000 Belongs to the agmatine deiminase family
PDHDCJFA_00526 3.83e-312 - - - V - - - Multidrug transporter MatE
PDHDCJFA_00527 3.53e-110 msrC 1.8.4.14 - T ko:K08968 ko00270,map00270 ko00000,ko00001,ko01000 GAF domain
PDHDCJFA_00528 0.0 - - - L - - - PD-(D/E)XK nuclease superfamily
PDHDCJFA_00529 4.77e-146 - - - P - - - Citrate transporter
PDHDCJFA_00530 1.15e-137 cysC 2.7.1.25 - F ko:K00860 ko00230,ko00920,ko01100,ko01120,map00230,map00920,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of activated sulfate
PDHDCJFA_00531 1.05e-221 cysD 2.7.7.4 - H ko:K00957 ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130 ko00000,ko00001,ko00002,ko01000 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase) FAD synthetase
PDHDCJFA_00532 0.0 cysN 2.7.1.25, 2.7.7.4 - P ko:K00955,ko:K00956 ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily
PDHDCJFA_00533 3.39e-278 - - - M - - - Sulfotransferase domain
PDHDCJFA_00534 4.54e-240 - - - S - - - Putative carbohydrate metabolism domain
PDHDCJFA_00535 5.94e-176 - - - K - - - transcriptional regulator (AraC family)
PDHDCJFA_00536 6.63e-85 - - - S - - - ARD/ARD' family
PDHDCJFA_00538 1.19e-158 ppiA 5.2.1.8 - M ko:K01802,ko:K03768 - ko00000,ko01000,ko03110 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PDHDCJFA_00539 1.55e-174 ppiA 5.2.1.8 - O ko:K03768 - ko00000,ko01000,ko03110 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PDHDCJFA_00540 2.07e-260 dinB 2.7.7.7 - L ko:K02346 - ko00000,ko01000,ko03400 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PDHDCJFA_00541 0.0 - - - M - - - CarboxypepD_reg-like domain
PDHDCJFA_00542 8.5e-116 - - - S - - - Domain of unknown function, B. Theta Gene description (DUF3872)
PDHDCJFA_00543 7.03e-213 - - - L - - - CHC2 zinc finger domain protein
PDHDCJFA_00544 1.13e-133 - - - S - - - Conjugative transposon protein TraO
PDHDCJFA_00545 2.13e-229 - - - U - - - Conjugative transposon TraN protein
PDHDCJFA_00546 3.02e-293 traM - - S - - - Conjugative transposon TraM protein
PDHDCJFA_00547 8.06e-64 - - - S - - - Protein of unknown function (DUF3989)
PDHDCJFA_00548 4.35e-144 - - - U - - - Conjugative transposon TraK protein
PDHDCJFA_00549 3.24e-162 - - - S - - - Homologues of TraJ from Bacteroides conjugative transposon
PDHDCJFA_00552 1.58e-124 - - - K - - - Acetyltransferase (GNAT) domain
PDHDCJFA_00553 0.0 - - - T - - - COG NOG26059 non supervised orthologous group
PDHDCJFA_00554 5.27e-260 - - - G - - - Xylose isomerase domain protein TIM barrel
PDHDCJFA_00555 2.86e-57 - - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 regulation of translation
PDHDCJFA_00556 4.97e-68 thiD 2.7.1.49, 2.7.4.7 - K ko:K00941 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 transcriptional regulator (AraC family)
PDHDCJFA_00557 8.77e-284 - - - T - - - Calcineurin-like phosphoesterase
PDHDCJFA_00558 0.0 gidA - - D ko:K03495 - ko00000,ko03016,ko03036 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PDHDCJFA_00559 0.0 ade 3.5.4.2 - F ko:K01486 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000 Adenine deaminase C-terminal domain
PDHDCJFA_00560 9.95e-126 - - - S - - - COG NOG23385 non supervised orthologous group
PDHDCJFA_00561 0.0 - - - P - - - Outer membrane protein beta-barrel family
PDHDCJFA_00562 1.4e-111 - 5.2.1.8 - O ko:K01802 - ko00000,ko01000 Peptidyl-prolyl cis-trans isomerase
PDHDCJFA_00563 0.0 - 3.4.14.5 - EU ko:K01278 ko04974,map04974 ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 Dipeptidyl peptidase IV (DPP IV) N-terminal region
PDHDCJFA_00564 1.64e-160 - 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Glycosyl-hydrolase 97 N-terminal
PDHDCJFA_00565 0.0 - - - G - - - Glycosyl hydrolase family 92
PDHDCJFA_00566 1.99e-299 - - - H - - - PD-(D/E)XK nuclease superfamily
PDHDCJFA_00567 6.59e-227 - - - L - - - COG NOG11942 non supervised orthologous group
PDHDCJFA_00568 3.41e-122 ruvA 3.6.4.12 - L ko:K03550 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PDHDCJFA_00569 3.51e-180 - 3.1.1.17 - G ko:K01053 ko00030,ko00053,ko00930,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,map00030,map00053,map00930,map01100,map01110,map01120,map01130,map01200,map01220 ko00000,ko00001,ko00002,ko01000,ko04147 SMP-30/Gluconolaconase/LRE-like region
PDHDCJFA_00570 0.0 trkH - - P ko:K03498 - ko00000,ko02000 Potassium transporter
PDHDCJFA_00571 0.0 trkA - - P ko:K03499 - ko00000,ko02000 Potassium transporter
PDHDCJFA_00572 1.4e-251 dxs 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PDHDCJFA_00573 0.0 - 1.8.5.4 - S ko:K17218 ko00920,map00920 ko00000,ko00001,ko01000 Pyridine nucleotide-disulphide oxidoreductase
PDHDCJFA_00574 0.0 - - - M - - - helix_turn_helix, Lux Regulon
PDHDCJFA_00575 0.0 carB 6.3.5.5 - EF ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase large chain, oligomerisation domain
PDHDCJFA_00576 3.21e-210 - 2.3.1.245 - G ko:K08321 ko02024,map02024 ko00000,ko00001,ko01000 DeoC/LacD family aldolase
PDHDCJFA_00577 5.67e-134 - 2.7.1.121 - S ko:K05879 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 DAK2 domain protein
PDHDCJFA_00578 3.07e-239 - 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 - G ko:K00863,ko:K05878 ko00051,ko00561,ko00680,ko01100,ko01120,ko01200,ko04622,map00051,map00561,map00680,map01100,map01120,map01200,map04622 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PDHDCJFA_00579 1.94e-70 - - - - - - - -
PDHDCJFA_00580 0.0 ccmC - - O - - - cytochrome c-type biogenesis protein CcsB
PDHDCJFA_00581 0.0 - - - P - - - TonB dependent receptor
PDHDCJFA_00582 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
PDHDCJFA_00583 7.54e-141 - - - S - - - Endonuclease/Exonuclease/phosphatase family
PDHDCJFA_00584 0.0 - - - P - - - Psort location OuterMembrane, score
PDHDCJFA_00585 4.05e-286 - - - M - - - Psort location CytoplasmicMembrane, score 10.00
PDHDCJFA_00586 0.0 - - - M ko:K08676 - ko00000,ko01000,ko01002 Tricorn protease homolog
PDHDCJFA_00587 0.0 - - - EU - - - Peptidase, S9A B C family, catalytic domain protein
PDHDCJFA_00588 0.0 nagZ2 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
PDHDCJFA_00589 5.56e-212 - - - S - - - Metallo-beta-lactamase superfamily
PDHDCJFA_00590 9.58e-244 gpsA 1.1.1.94 - I ko:K00057 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 Glycerol-3-phosphate dehydrogenase
PDHDCJFA_00591 0.0 lysS 6.1.1.6 - J ko:K04567 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family
PDHDCJFA_00592 2.37e-73 - - - M - - - N-terminal domain of galactosyltransferase
PDHDCJFA_00593 2.78e-127 nadD 2.7.7.18 - H ko:K00969 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PDHDCJFA_00595 4.61e-132 gmk 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Essential for recycling GMP and indirectly, cGMP
PDHDCJFA_00596 1.31e-192 - - - S - - - Domain of unknown function (DUF1732)
PDHDCJFA_00597 0.0 mfd - - L ko:K03723 ko03420,map03420 ko00000,ko00001,ko01000,ko03400 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PDHDCJFA_00598 0.0 - 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 AMP-binding enzyme
PDHDCJFA_00599 2.58e-144 - - - - - - - -
PDHDCJFA_00600 0.0 - - - M - - - CarboxypepD_reg-like domain
PDHDCJFA_00601 4.4e-288 mleN - - C ko:K03315 - ko00000,ko02000 Na H antiporter
PDHDCJFA_00602 4.92e-163 - - - - - - - -
PDHDCJFA_00603 0.0 - - - I ko:K06076 - ko00000,ko02000 Psort location OuterMembrane, score 9.52
PDHDCJFA_00604 0.0 glgP 2.4.1.1, 2.4.1.11, 2.4.1.8 GH65,GT3,GT35 G ko:K00688,ko:K00691,ko:K16153 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 ko00000,ko00001,ko01000,ko01003 alpha-glucan phosphorylase
PDHDCJFA_00605 0.0 - 2.4.1.11 GT3 G ko:K00693 ko00500,ko01100,ko04151,ko04152,ko04910,ko04922,ko04931,map00500,map01100,map04151,map04152,map04910,map04922,map04931 ko00000,ko00001,ko01000,ko01003 starch synthase
PDHDCJFA_00606 2.83e-92 - - - K ko:K02477 - ko00000,ko02022 LytTr DNA-binding domain protein
PDHDCJFA_00608 0.0 recN - - L ko:K03631 - ko00000,ko03400 May be involved in recombinational repair of damaged DNA
PDHDCJFA_00609 1.04e-217 - - - S - - - Domain of unknown function (DUF4835)
PDHDCJFA_00610 1.51e-280 coaBC 4.1.1.36, 6.3.2.5 - H ko:K13038 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PDHDCJFA_00611 1.39e-220 yqhD - - C ko:K08325 ko00640,map00640 ko00000,ko00001,ko01000 alcohol dehydrogenase
PDHDCJFA_00612 5.48e-261 - - - S - - - Endonuclease/Exonuclease/phosphatase family
PDHDCJFA_00613 1.06e-115 - - - M - - - Belongs to the ompA family
PDHDCJFA_00614 4.18e-71 - - - S - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_00615 2.77e-90 - - - T - - - Histidine kinase-like ATPases
PDHDCJFA_00616 0.0 clpB - - O ko:K03695 ko04213,map04213 ko00000,ko00001,ko03110 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PDHDCJFA_00617 3.94e-221 - - GT2 M ko:K20534 - ko00000,ko01000,ko01005,ko02000 Glycosyltransferase
PDHDCJFA_00618 4.01e-87 - - - S - - - GtrA-like protein
PDHDCJFA_00619 3.02e-174 - - - - - - - -
PDHDCJFA_00620 3.03e-232 glcU - - G ko:K05340 - ko00000,ko02000 Sugar transport protein
PDHDCJFA_00621 5.79e-243 - - - F - - - Inosine-uridine preferring nucleoside hydrolase
PDHDCJFA_00622 0.0 - - - O - - - ADP-ribosylglycohydrolase
PDHDCJFA_00623 1.66e-22 - - - S - - - TRL-like protein family
PDHDCJFA_00624 0.0 - - - - - - - -
PDHDCJFA_00625 4.33e-180 - - - S - - - Exopolysaccharide biosynthesis protein YbjH
PDHDCJFA_00626 1.99e-237 - - - S - - - Hemolysin
PDHDCJFA_00627 2.85e-197 - - - I - - - Acyltransferase
PDHDCJFA_00628 3.15e-199 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
PDHDCJFA_00629 4.63e-174 lptB - - S ko:K06861 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
PDHDCJFA_00630 1.63e-287 - - - G - - - Glycosyl hydrolases family 43
PDHDCJFA_00631 1.38e-154 mlaE - - Q ko:K02066 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component
PDHDCJFA_00632 3.54e-181 metN - - Q ko:K02065 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, ATP-binding protein
PDHDCJFA_00633 4.51e-266 metK 2.5.1.6 - H ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PDHDCJFA_00635 2.2e-21 - - - S - - - Domain of unknown function (DUF5053)
PDHDCJFA_00637 3.45e-192 - - - S - - - PD-(D/E)XK nuclease family transposase
PDHDCJFA_00638 6.67e-190 surE 3.1.3.5 - S ko:K03787 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
PDHDCJFA_00639 2.66e-271 lpxB 2.4.1.182 GT19 M ko:K00748 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PDHDCJFA_00640 0.0 - - - G - - - Tetratricopeptide repeat protein
PDHDCJFA_00641 4.83e-179 - - - G - - - Tetratricopeptide repeat protein
PDHDCJFA_00642 1.71e-124 - 3.6.1.55 - F ko:K03574 - ko00000,ko01000,ko03400 Belongs to the Nudix hydrolase family
PDHDCJFA_00643 7.17e-233 glcK 2.7.1.2 - G ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 glucokinase
PDHDCJFA_00644 2.83e-91 gloA 4.4.1.5 - E ko:K01759 ko00620,map00620 ko00000,ko00001,ko01000 Lactoylglutathione lyase
PDHDCJFA_00645 8.5e-156 - - - S - - - Beta-lactamase superfamily domain
PDHDCJFA_00646 5.18e-305 - - - S ko:K21572 - ko00000,ko02000 Pfam:SusD
PDHDCJFA_00647 9.13e-203 fabI 1.3.1.10, 1.3.1.9 - I ko:K00208 ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Enoyl- acyl-carrier-protein reductase NADH
PDHDCJFA_00648 2.01e-141 yciO - - J - - - Belongs to the SUA5 family
PDHDCJFA_00649 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PDHDCJFA_00650 6.87e-23 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PDHDCJFA_00651 0.0 - - - H - - - Susd and RagB outer membrane lipoprotein
PDHDCJFA_00652 1.67e-43 - - - S - - - Predicted AAA-ATPase
PDHDCJFA_00653 4.01e-48 - - - S - - - Winged helix-turn-helix domain (DUF2582)
PDHDCJFA_00654 8.69e-195 - 5.1.3.30, 5.1.3.31 - G ko:K18910 - ko00000,ko01000 Xylose isomerase-like TIM barrel
PDHDCJFA_00655 4.86e-302 - 3.1.3.1 - S ko:K01113 ko00790,ko01100,ko02020,map00790,map01100,map02020 ko00000,ko00001,ko00002,ko01000 phosphodiesterase
PDHDCJFA_00656 0.0 - - - P - - - Carboxypeptidase regulatory-like domain
PDHDCJFA_00657 5.03e-202 - - - S - - - amine dehydrogenase activity
PDHDCJFA_00658 1.44e-188 - - - S - - - COG NOG23387 non supervised orthologous group
PDHDCJFA_00659 2.28e-202 - - - T - - - Domain of unknown function (DUF5074)
PDHDCJFA_00663 3.42e-45 - - - - - - - -
PDHDCJFA_00664 2.12e-180 - - - S - - - PRTRC system protein E
PDHDCJFA_00665 2.68e-47 - - - S - - - Prokaryotic Ubiquitin
PDHDCJFA_00666 2.87e-271 - - - S - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_00667 5.88e-164 - - - S - - - PRTRC system protein B
PDHDCJFA_00668 5.29e-195 - - - H - - - PRTRC system ThiF family protein
PDHDCJFA_00669 7.86e-284 - - - L - - - Belongs to the 'phage' integrase family
PDHDCJFA_00670 0.0 - - - H - - - Outer membrane protein beta-barrel family
PDHDCJFA_00671 9.29e-123 - - - K - - - Sigma-70, region 4
PDHDCJFA_00672 6.91e-120 - - - L - - - Integrase core domain protein
PDHDCJFA_00673 2.89e-34 - - - L - - - transposase activity
PDHDCJFA_00675 0.0 - - - C - - - 4Fe-4S binding domain
PDHDCJFA_00676 1.43e-223 - - - S - - - Domain of unknown function (DUF362)
PDHDCJFA_00678 2.88e-219 lacX - - G - - - Aldose 1-epimerase
PDHDCJFA_00679 1.55e-152 ktrA - - P ko:K03499 - ko00000,ko02000 COG0569 K transport systems NAD-binding component
PDHDCJFA_00680 0.0 - 2.3.1.54, 4.1.1.83 - C ko:K00656,ko:K18427 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 ko00000,ko00001,ko01000 Pyruvate formate lyase-like
PDHDCJFA_00681 4e-205 - 1.97.1.4 - C ko:K04069 - ko00000,ko01000 4Fe-4S single cluster domain
PDHDCJFA_00682 8.84e-76 - - - S - - - HEPN domain
PDHDCJFA_00683 2.99e-56 - - - L - - - Nucleotidyltransferase domain
PDHDCJFA_00684 1.12e-211 - - - K - - - helix_turn_helix, arabinose operon control protein
PDHDCJFA_00687 2.85e-10 - - - U - - - luxR family
PDHDCJFA_00688 4.69e-124 - - - S - - - Tetratricopeptide repeat
PDHDCJFA_00689 1.19e-279 - - - I - - - Acyltransferase
PDHDCJFA_00690 5.27e-236 ddl 6.3.2.4 - F ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Belongs to the D-alanine--D-alanine ligase family
PDHDCJFA_00691 5.51e-264 rluD 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
PDHDCJFA_00692 5.48e-143 pknB 2.7.11.1, 6.3.2.4 - S ko:K01921,ko:K08884,ko:K12132 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01001,ko01011 PASTA domain protein
PDHDCJFA_00693 0.0 - - - T - - - Two component regulator propeller
PDHDCJFA_00694 4.41e-137 rdgB 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PDHDCJFA_00695 4.14e-198 - - - S - - - membrane
PDHDCJFA_00696 0.0 leuS 6.1.1.4 - J ko:K01869 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Belongs to the class-I aminoacyl-tRNA synthetase family
PDHDCJFA_00697 2.21e-195 leuS 6.1.1.4 - J ko:K01869 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Belongs to the class-I aminoacyl-tRNA synthetase family
PDHDCJFA_00698 8.27e-223 - - - P - - - Nucleoside recognition
PDHDCJFA_00699 0.0 metH 2.1.1.13 - E ko:K00548 ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 B12 binding domain
PDHDCJFA_00700 5.93e-212 - - - S - - - MlrC C-terminus
PDHDCJFA_00701 3.21e-292 - - - S - - - Domain of unknown function (DUF5103)
PDHDCJFA_00702 8.94e-224 - - - C - - - 4Fe-4S binding domain
PDHDCJFA_00703 0.0 guaD 3.5.4.3 - F ko:K01487 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000 Amidohydrolase family
PDHDCJFA_00704 4.4e-201 fieF - - P - - - Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PDHDCJFA_00705 5.49e-288 - - - S - - - Belongs to the UPF0597 family
PDHDCJFA_00706 1.87e-11 - - - N - - - Leucine rich repeats (6 copies)
PDHDCJFA_00707 0.0 - - - T - - - His Kinase A (phosphoacceptor) domain
PDHDCJFA_00708 6.7e-303 - - - EGP ko:K08218 ko01501,map01501 ko00000,ko00001,ko00002,ko02000 BT1 family
PDHDCJFA_00709 9.48e-193 ramA_1 3.5.1.3 - S ko:K13566 ko00250,map00250 ko00000,ko00001,ko01000 Hydrolase, carbon-nitrogen family
PDHDCJFA_00710 1.2e-128 - - - I - - - Acyltransferase
PDHDCJFA_00711 5.36e-62 - - - S - - - COG NOG23371 non supervised orthologous group
PDHDCJFA_00712 1.97e-159 - - - KT - - - Transcriptional regulatory protein, C terminal
PDHDCJFA_00713 8.82e-141 - - - M - - - Protein of unknown function (DUF4254)
PDHDCJFA_00714 2.05e-255 - - GT9 M ko:K02843 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 glycosyl transferase family
PDHDCJFA_00715 5.64e-172 - - - T - - - Lipopolysaccharide kinase (Kdo/WaaP) family
PDHDCJFA_00716 1.42e-216 - - - - - - - -
PDHDCJFA_00717 3.38e-251 - - - M - - - Group 1 family
PDHDCJFA_00718 9.17e-102 - - - M - - - Mannosyltransferase
PDHDCJFA_00719 0.0 - - - P - - - CarboxypepD_reg-like domain
PDHDCJFA_00720 2e-94 mce 5.1.99.1 - E ko:K05606 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 methylmalonyl-CoA epimerase
PDHDCJFA_00721 0.0 - - - I - - - Carboxyl transferase domain
PDHDCJFA_00722 8.03e-198 - - - C - - - Oxaloacetate decarboxylase, gamma chain
PDHDCJFA_00723 3.31e-76 mmdC - - I - - - Biofilm PGA synthesis protein PgaD
PDHDCJFA_00724 3.54e-181 thi4 - - H ko:K03146 ko00730,ko01100,map00730,map01100 ko00000,ko00001 Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur
PDHDCJFA_00725 1.83e-96 - - - - - - - -
PDHDCJFA_00726 2.54e-96 - - - S - - - COG NOG32090 non supervised orthologous group
PDHDCJFA_00727 4.33e-260 - - - M - - - Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDHDCJFA_00730 1.01e-91 - - - P - - - TonB-dependent receptor plug domain
PDHDCJFA_00731 6.83e-253 - - - S - - - Domain of unknown function (DUF4249)
PDHDCJFA_00732 0.0 - - - P - - - TonB-dependent receptor plug domain
PDHDCJFA_00733 2.33e-135 - - - S - - - Tetratricopeptide repeat protein
PDHDCJFA_00734 1.02e-144 - - - S - - - PD-(D/E)XK nuclease family transposase
PDHDCJFA_00737 3.23e-140 - - - S - - - Protein of unknown function (DUF1573)
PDHDCJFA_00738 4.18e-262 argK - - E ko:K07588 - ko00000,ko01000 LAO AO transport system ATPase
PDHDCJFA_00739 0.0 - - - U - - - WD40-like Beta Propeller Repeat
PDHDCJFA_00740 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDHDCJFA_00741 1.52e-79 pfkA 2.7.1.11 - G ko:K00850 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230 ko00000,ko00001,ko00002,ko01000,ko01009,ko03019 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PDHDCJFA_00743 4.52e-106 - - - J - - - Threonyl and Alanyl tRNA synthetase second additional domain
PDHDCJFA_00744 0.0 - - - T - - - His Kinase A (phosphoacceptor) domain
PDHDCJFA_00745 0.0 nrfA 1.7.2.2 - C ko:K03385 ko00910,ko01120,ko05132,map00910,map01120,map05132 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
PDHDCJFA_00748 0.0 - - - S - - - Phosphotransferase enzyme family
PDHDCJFA_00749 1.45e-179 hddC - - JM - - - COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon)
PDHDCJFA_00750 2.5e-261 - - - S - - - endonuclease exonuclease phosphatase family protein
PDHDCJFA_00751 0.0 ppsA - - GKT - - - Pyruvate phosphate dikinase, PEP pyruvate binding domain
PDHDCJFA_00752 1.27e-208 - - - T - - - Histidine kinase
PDHDCJFA_00753 5.74e-284 mntH - - P ko:K03322 - ko00000,ko02000 Natural resistance-associated macrophage protein
PDHDCJFA_00754 0.0 glnS 6.1.1.18 - J ko:K01886 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
PDHDCJFA_00756 4.78e-244 - 2.6.1.59 - E ko:K02805 - ko00000,ko01000,ko01007 DegT/DnrJ/EryC1/StrS aminotransferase family
PDHDCJFA_00757 1.46e-43 pglE - - E - - - DegT/DnrJ/EryC1/StrS aminotransferase family
PDHDCJFA_00758 1.75e-186 - - - S - - - Fic/DOC family
PDHDCJFA_00759 0.0 hutU 4.2.1.49 - E ko:K01712 ko00340,ko01100,map00340,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
PDHDCJFA_00760 3.37e-73 ftcD 2.1.2.5, 4.3.1.4 - E ko:K00603,ko:K13990 ko00340,ko00670,ko01100,map00340,map00670,map01100 ko00000,ko00001,ko01000,ko03036,ko04147 Glutamate formiminotransferase
PDHDCJFA_00761 3.6e-75 ftcD 2.1.2.5, 4.3.1.4 - E ko:K00603,ko:K13990 ko00340,ko00670,ko01100,map00340,map00670,map01100 ko00000,ko00001,ko01000,ko03036,ko04147 Glutamate formiminotransferase
PDHDCJFA_00762 0.0 - 1.3.1.1, 1.3.98.1 - C ko:K00226,ko:K17723 ko00240,ko00410,ko00770,ko01100,map00240,map00410,map00770,map01100 ko00000,ko00001,ko00002,ko01000 4Fe-4S dicluster domain
PDHDCJFA_00767 1.12e-81 - - - S - - - Protein of unknown function (DUF2721)
PDHDCJFA_00768 2.95e-154 recO - - L ko:K03584 ko03440,map03440 ko00000,ko00001,ko03400 Involved in DNA repair and RecF pathway recombination
PDHDCJFA_00770 1.86e-63 - - - S ko:K07075 - ko00000 Nucleotidyltransferase domain
PDHDCJFA_00771 1.79e-77 - - - S - - - Protein of unknown function DUF86
PDHDCJFA_00772 2.12e-138 - - - EG - - - EamA-like transporter family
PDHDCJFA_00773 4.39e-101 - - - - - - - -
PDHDCJFA_00774 1.15e-89 - 2.7.11.1 - T ko:K04757 - ko00000,ko01000,ko01001,ko03021 sigma factor antagonist activity
PDHDCJFA_00775 0.0 - - - M - - - Outer membrane protein, OMP85 family
PDHDCJFA_00776 0.0 - - - - - - - -
PDHDCJFA_00777 6.05e-219 rocF 3.5.3.1, 3.5.3.11 - E ko:K01476,ko:K01480 ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146 ko00000,ko00001,ko00002,ko01000 Belongs to the arginase family
PDHDCJFA_00778 1.24e-154 rocD 2.6.1.13 - E ko:K00819 ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130 ko00000,ko00001,ko01000,ko01007 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PDHDCJFA_00779 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDHDCJFA_00780 0.0 - - - H - - - Susd and RagB outer membrane lipoprotein
PDHDCJFA_00781 2.4e-277 - - - L - - - Arm DNA-binding domain
PDHDCJFA_00782 9.29e-132 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PDHDCJFA_00783 3.8e-161 radC - - E ko:K03630 - ko00000 Belongs to the UPF0758 family
PDHDCJFA_00784 5.99e-70 yitW - - S - - - FeS assembly SUF system protein
PDHDCJFA_00785 3.07e-197 lpxH 3.6.1.54 - S ko:K03269 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 UDP-2,3-diacylglucosamine hydrolase
PDHDCJFA_00786 1.44e-188 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
PDHDCJFA_00787 4.34e-305 - - - P - - - phosphate-selective porin O and P
PDHDCJFA_00788 2.48e-187 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
PDHDCJFA_00789 4.47e-15 - - - S - - - Domain of unknown function (DUF5053)
PDHDCJFA_00790 7.01e-289 - - - M - - - Phosphate-selective porin O and P
PDHDCJFA_00791 0.0 nifJ 1.2.7.1 - C ko:K03737 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
PDHDCJFA_00792 1.4e-260 recF - - L ko:K03629 ko03440,map03440 ko00000,ko00001,ko03400 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PDHDCJFA_00793 2.45e-63 - - - S - - - Protein of unknown function (DUF721)
PDHDCJFA_00794 1.06e-118 fthC 6.3.3.2 - H ko:K01934 ko00670,ko01100,map00670,map01100 ko00000,ko00001,ko01000 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PDHDCJFA_00795 0.0 ctp 3.4.21.102 - M ko:K03797 - ko00000,ko01000,ko01002 Belongs to the peptidase S41A family
PDHDCJFA_00796 1.67e-99 comEB 3.5.4.12 - F ko:K01493 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko02044 deaminase
PDHDCJFA_00797 3.73e-79 dcp 3.4.15.5, 3.4.24.70 - E ko:K01284,ko:K01414 - ko00000,ko01000,ko01002 peptidase
PDHDCJFA_00798 3.11e-36 - - - M - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_00799 8.11e-283 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
PDHDCJFA_00800 0.0 lacZ 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 beta-galactosidase
PDHDCJFA_00801 3.73e-138 - - - EGP - - - Major Facilitator Superfamily
PDHDCJFA_00804 3.31e-195 - - - S - - - Phospholipase/Carboxylesterase
PDHDCJFA_00805 0.0 - - - G - - - Glycosyl hydrolases family 43
PDHDCJFA_00806 2.37e-287 bglX 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 PFAM Glycosyl hydrolase family 3 C terminal domain
PDHDCJFA_00807 1.98e-116 mpl 6.3.2.45, 6.3.2.8 - M ko:K01924,ko:K02558 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Mur ligase middle domain
PDHDCJFA_00808 8.64e-125 - - - S - - - Domain of unknown function (DUF4924)
PDHDCJFA_00809 3.61e-210 rfbD 1.1.1.133 - M ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PDHDCJFA_00810 0.0 prfC - - J ko:K02837 - ko00000,ko03012 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PDHDCJFA_00811 8.23e-247 apbE 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PDHDCJFA_00812 5.14e-161 yjjG - - S ko:K07025 - ko00000 Hydrolase
PDHDCJFA_00813 5.53e-130 - - - P ko:K02014 - ko00000,ko02000 COGs COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
PDHDCJFA_00814 9.66e-39 - - - S - - - Peptidase M4, propeptide, PepSY
PDHDCJFA_00815 0.0 - - - H - - - COG NOG08812 non supervised orthologous group
PDHDCJFA_00816 4.8e-297 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase class I and II
PDHDCJFA_00817 1.32e-137 slyD 5.2.1.8 - O ko:K03775 - ko00000,ko01000,ko03110 Peptidyl-prolyl cis-trans isomerase
PDHDCJFA_00818 1.63e-260 aroC 4.2.3.5 - E ko:K01736 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PDHDCJFA_00819 2.08e-66 sugE - - P ko:K11741 - ko00000,ko02000 Small Multidrug Resistance protein
PDHDCJFA_00820 1.82e-107 rlmH 2.1.1.177 - J ko:K00783 - ko00000,ko01000,ko03009 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PDHDCJFA_00821 1.47e-74 - - - S - - - Domain of unknown function (DUF4783)
PDHDCJFA_00823 3.76e-290 - - - S - - - Protein of unknown function (DUF4876)
PDHDCJFA_00824 1.1e-32 - - - DJ - - - Psort location Cytoplasmic, score
PDHDCJFA_00826 1.79e-287 nspC 4.1.1.96 - E ko:K13747 ko00330,ko01100,map00330,map01100 ko00000,ko00001,ko01000 carboxynorspermidine decarboxylase
PDHDCJFA_00827 0.0 pcrA 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
PDHDCJFA_00828 0.0 - - - S - - - Tetratricopeptide repeat protein
PDHDCJFA_00829 2.16e-97 - - - O - - - NfeD-like C-terminal, partner-binding
PDHDCJFA_00830 7.88e-206 - - - S - - - UPF0365 protein
PDHDCJFA_00831 5.51e-206 udp 2.4.2.3 - F ko:K00757 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 phosphorylase
PDHDCJFA_00832 2.04e-160 rpiA 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
PDHDCJFA_00833 3.06e-154 - 1.5.1.38, 1.5.1.39 - C ko:K19285,ko:K19286 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 Nitroreductase family
PDHDCJFA_00834 9.05e-152 - - - E - - - Translocator protein, LysE family
PDHDCJFA_00835 0.0 - - - P - - - Type I phosphodiesterase / nucleotide pyrophosphatase
PDHDCJFA_00836 0.0 arsA - - P - - - Domain of unknown function
PDHDCJFA_00837 5.58e-89 rhuM - - - - - - -
PDHDCJFA_00838 4.68e-07 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative DNA-binding domain
PDHDCJFA_00839 9.3e-12 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 domain shared with the mammalian protein Schlafen
PDHDCJFA_00840 2.48e-178 soj - - D ko:K03496 - ko00000,ko03036,ko04812 Chromosome partitioning protein ParA
PDHDCJFA_00841 4.66e-201 parB - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
PDHDCJFA_00842 1.69e-169 - - - S - - - Psort location CytoplasmicMembrane, score
PDHDCJFA_00843 0.0 mltD - - M ko:K08307 - ko00000,ko01000,ko01011 transglycosylase
PDHDCJFA_00844 2.1e-214 - - - S - - - Protein of unknown function (DUF3108)
PDHDCJFA_00845 0.0 - - - S - - - Bacterial Ig-like domain
PDHDCJFA_00848 9.76e-317 - - - S - - - Protein of unknown function (DUF2851)
PDHDCJFA_00849 3.06e-198 - - - S ko:K07133 - ko00000 ATPase (AAA superfamily)
PDHDCJFA_00850 0.0 - - - L - - - DNA primase, small subunit
PDHDCJFA_00851 1.23e-255 - - - S - - - Competence protein
PDHDCJFA_00852 7.36e-46 mreD - - S - - - rod shape-determining protein MreD
PDHDCJFA_00853 0.0 mrdA 3.4.16.4 - M ko:K05515 ko00550,ko01501,map00550,map01501 ko00000,ko00001,ko01000,ko01011 Penicillin-binding Protein
PDHDCJFA_00854 0.0 rodA - - D ko:K05837 - ko00000,ko03036 Belongs to the SEDS family
PDHDCJFA_00855 3.05e-203 yaaT - - S - - - PSP1 C-terminal domain protein
PDHDCJFA_00856 4.88e-197 glgA 2.4.1.21 GT5 G ko:K00703 ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026 ko00000,ko00001,ko00002,ko01000,ko01003 synthase
PDHDCJFA_00857 5.97e-205 panC 6.3.2.1 - H ko:K01918 ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
PDHDCJFA_00858 1.77e-74 panD 4.1.1.11 - H ko:K01579 ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
PDHDCJFA_00859 1.99e-298 - - - V - - - COG0534 Na -driven multidrug efflux pump
PDHDCJFA_00860 2.31e-99 - - - P ko:K03711 - ko00000,ko03000 Belongs to the Fur family
PDHDCJFA_00861 0.0 estS 3.1.1.53 - E ko:K05970 - ko00000,ko01000 Carbohydrate esterase, sialic acid-specific acetylesterase
PDHDCJFA_00862 4.11e-296 - - - S - - - Cyclically-permuted mutarotase family protein
PDHDCJFA_00864 1.74e-192 - - - S - - - Metallo-beta-lactamase superfamily
PDHDCJFA_00865 1.4e-293 - - - S - - - COG NOG25960 non supervised orthologous group
PDHDCJFA_00866 4.19e-05 - - - - - - - -
PDHDCJFA_00867 6.21e-147 - 4.1.3.38 - EH ko:K02619 ko00790,map00790 ko00000,ko00001,ko01000 Amino-transferase class IV
PDHDCJFA_00868 6.48e-244 pabB 2.6.1.85 - EH ko:K01665 ko00790,map00790 ko00000,ko00001,ko01000 component I
PDHDCJFA_00869 3.09e-91 pabB 3.5.1.53 - S ko:K12251 ko00330,ko01100,map00330,map01100 ko00000,ko00001,ko01000 Hydrolase, carbon-nitrogen family
PDHDCJFA_00870 0.0 - - - P ko:K03455 - ko00000 COG0475 Kef-type K transport systems, membrane components
PDHDCJFA_00871 9.79e-181 kdsB 2.7.7.38 - M ko:K00979 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
PDHDCJFA_00872 0.0 - - - - - - - -
PDHDCJFA_00873 1.05e-53 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins
PDHDCJFA_00874 6.46e-148 eam 5.4.3.2 - E ko:K01843 ko00310,map00310 ko00000,ko00001,ko01000 KamA family
PDHDCJFA_00875 6.82e-285 - - - S ko:K09955 - ko00000 Beta-L-arabinofuranosidase, GH127
PDHDCJFA_00876 0.0 - - - S - - - Beta-L-arabinofuranosidase, GH127
PDHDCJFA_00877 0.0 cvrA - - P ko:K11105 - ko00000,ko02000 Potassium
PDHDCJFA_00878 2.37e-291 - 1.1.1.336 - M ko:K02472 ko00520,ko05111,map00520,map05111 ko00000,ko00001,ko01000 Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PDHDCJFA_00879 1.5e-162 - - - GM - - - COG COG4464 Capsular polysaccharide biosynthesis protein
PDHDCJFA_00880 0.0 - - - DM - - - Chain length determinant protein
PDHDCJFA_00881 6.54e-144 - - - M ko:K01991 ko02026,map02026 ko00000,ko00001,ko02000 COG1596 Periplasmic protein involved in polysaccharide export
PDHDCJFA_00882 0.0 - - - S ko:K21572 - ko00000,ko02000 Pfam:SusD
PDHDCJFA_00883 0.0 - - - P - - - TonB dependent receptor
PDHDCJFA_00884 6.57e-240 - - - T - - - His Kinase A (phosphoacceptor) domain
PDHDCJFA_00885 1.42e-222 zraS_1 - - T - - - GHKL domain
PDHDCJFA_00886 0.0 - - - T - - - Sigma-54 interaction domain
PDHDCJFA_00888 5.95e-194 nudC 3.6.1.22 - L ko:K03426 ko00760,ko01100,ko04146,map00760,map01100,map04146 ko00000,ko00001,ko01000 NADH pyrophosphatase zinc ribbon domain
PDHDCJFA_00889 1.05e-286 - - - U ko:K02123 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002 Belongs to the V-ATPase 116 kDa subunit family
PDHDCJFA_00890 1.96e-131 - - - C ko:K02120 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002 ATP synthase subunit D
PDHDCJFA_00891 1.39e-313 ntpB - - C ko:K02118 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002 the B subunit is part of the catalytic core of the ATP synthase complex
PDHDCJFA_00892 0.0 atpA 3.6.3.14, 3.6.3.15 - C ko:K02117 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit
PDHDCJFA_00893 1.44e-18 - - - C - - - Protein of unknown function (DUF2764)
PDHDCJFA_00894 4.55e-265 - - - P ko:K02016 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component
PDHDCJFA_00895 1.29e-271 - - - S - - - amine dehydrogenase activity
PDHDCJFA_00898 5.66e-278 - 3.1.3.3 - T ko:K07315 - ko00000,ko01000,ko03021 Sigma factor PP2C-like phosphatases
PDHDCJFA_00899 5.06e-199 - - - T - - - GHKL domain
PDHDCJFA_00900 1.2e-262 - - - T - - - Histidine kinase-like ATPases
PDHDCJFA_00901 1.5e-181 - - - T - - - Histidine kinase-like ATPases
PDHDCJFA_00902 8.6e-52 - - - T - - - Histidine kinase-like ATPases
PDHDCJFA_00903 1.66e-54 - - - H - - - Psort location OuterMembrane, score
PDHDCJFA_00904 1.08e-111 rhaT - - EG ko:K02856 - ko00000,ko02000 L-rhamnose-proton symport protein (RhaT)
PDHDCJFA_00905 2.07e-194 rhaD 4.1.2.19 - G ko:K01629 ko00040,ko00051,ko01120,map00040,map00051,map01120 ko00000,ko00001,ko01000 Class II Aldolase and Adducin N-terminal domain
PDHDCJFA_00906 0.0 - - - G - - - Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
PDHDCJFA_00907 7.29e-253 - - - S - - - Biotin-protein ligase, N terminal
PDHDCJFA_00908 4.02e-166 - - - S - - - Conserved hypothetical protein (DUF2461)
PDHDCJFA_00909 0.0 - - - M ko:K07001 - ko00000 esterase of the alpha-beta hydrolase superfamily
PDHDCJFA_00910 4.63e-151 - - - S - - - 6-bladed beta-propeller
PDHDCJFA_00911 1.78e-146 fahA - - Q - - - 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
PDHDCJFA_00912 1.24e-152 rex - - K ko:K01926 - ko00000,ko03000 Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PDHDCJFA_00913 0.0 - - - E - - - Zinc carboxypeptidase
PDHDCJFA_00914 5.04e-109 asnC - - K ko:K03718 - ko00000,ko03000 Transcriptional regulator
PDHDCJFA_00915 0.0 asnS 6.1.1.22 - J ko:K01893 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Asparaginyl-tRNA synthetase
PDHDCJFA_00916 5.52e-259 rluB 5.4.99.22 - J ko:K06178 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
PDHDCJFA_00917 0.0 purB 4.3.2.2 - F ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PDHDCJFA_00919 2.9e-223 - - - P ko:K01138 - ko00000,ko01000 Domain of unknown function (DUF4976)
PDHDCJFA_00920 0.0 - - - P - - - Domain of unknown function (DUF4976)
PDHDCJFA_00921 1.06e-228 - 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 Glycerophosphoryl diester phosphodiesterase family
PDHDCJFA_00923 1.53e-315 - - - E - - - Domain of Unknown Function (DUF1080)
PDHDCJFA_00924 2.06e-298 - - - V ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
PDHDCJFA_00925 1.69e-277 - - - CP ko:K01992 - ko00000,ko00002,ko02000 membrane
PDHDCJFA_00926 4.94e-224 - - - M ko:K01993 - ko00000 Hemolysin secretion protein D
PDHDCJFA_00927 2e-307 - - - S - - - Predicted AAA-ATPase
PDHDCJFA_00928 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDHDCJFA_00929 0.0 - - - U - - - WD40-like Beta Propeller Repeat
PDHDCJFA_00930 6.59e-48 - - - - - - - -
PDHDCJFA_00931 0.0 - - - P ko:K07085 - ko00000 TrkA C-terminal domain protein
PDHDCJFA_00932 9.29e-179 dacA - - S - - - Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PDHDCJFA_00933 4.34e-198 folP 2.5.1.15 - H ko:K00796 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 dihydropteroate synthase
PDHDCJFA_00934 2.29e-311 murF 6.3.2.10 - M ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PDHDCJFA_00935 0.0 - - - S - - - Predicted membrane protein (DUF2339)
PDHDCJFA_00936 2.44e-143 trpA 4.2.1.20 - E ko:K01695 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PDHDCJFA_00937 2.69e-277 yqhD - - C ko:K08325 ko00640,map00640 ko00000,ko00001,ko01000 alcohol dehydrogenase
PDHDCJFA_00938 1.95e-305 - - - C ko:K18929 - ko00000 4Fe-4S ferredoxin
PDHDCJFA_00939 4.01e-182 - - - C ko:K18928 - ko00000 Fe-S oxidoreductase
PDHDCJFA_00940 1.07e-128 - - - T - - - COGs COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase
PDHDCJFA_00941 0.0 carB 6.3.5.5 - EF ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase (glutamine-hydrolyzing)
PDHDCJFA_00942 1.83e-165 cobB - - K ko:K12410 - ko00000,ko01000 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PDHDCJFA_00943 0.0 - - - - - - - -
PDHDCJFA_00944 7.77e-105 - - - L - - - ABC transporter
PDHDCJFA_00945 0.0 - - - G - - - Glycosyl hydrolases family 2
PDHDCJFA_00946 2.49e-114 - - - L - - - Phage integrase, N-terminal SAM-like domain
PDHDCJFA_00947 2.08e-64 - - - L - - - Phage integrase, N-terminal SAM-like domain
PDHDCJFA_00948 7.38e-99 purN 2.1.2.2 - F ko:K11175 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PDHDCJFA_00949 1.22e-264 pdxB 1.1.1.290 - H ko:K03473 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate
PDHDCJFA_00950 1.11e-281 - - - EGP - - - Major Facilitator Superfamily
PDHDCJFA_00951 0.0 - - - P - - - Psort location OuterMembrane, score
PDHDCJFA_00952 1.36e-105 - - - G - - - YhcH YjgK YiaL family protein
PDHDCJFA_00953 5.98e-287 pepQ 3.4.11.9, 3.4.13.9 - E ko:K01262,ko:K01271 - ko00000,ko01000,ko01002 peptidase M24
PDHDCJFA_00954 0.0 - 3.1.3.1 - P ko:K01077 ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020 ko00000,ko00001,ko00002,ko00537,ko01000,ko04147 Belongs to the alkaline phosphatase family
PDHDCJFA_00955 2.77e-219 pyrB 2.1.3.2 - F ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
PDHDCJFA_00957 0.0 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
PDHDCJFA_00960 1.26e-159 - - - S - - - Outer membrane protein beta-barrel domain
PDHDCJFA_00961 1.89e-304 - - - P - - - TonB dependent receptor
PDHDCJFA_00962 0.0 - - - S ko:K21572 - ko00000,ko02000 Pfam:SusD
PDHDCJFA_00963 0.0 - - - G - - - Glycogen debranching enzyme
PDHDCJFA_00964 7.88e-316 gmhA 2.4.1.346 GT4 M ko:K13668 - ko00000,ko01000,ko01003 Starch synthase catalytic domain
PDHDCJFA_00965 7.42e-314 amyA 3.2.1.1 GH57 G ko:K07405 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 57 family
PDHDCJFA_00966 1.42e-99 - - - S - - - Domain of unknown function (DUF4252)
PDHDCJFA_00967 3.59e-286 - - - S - - - 6-bladed beta-propeller
PDHDCJFA_00968 0.0 mutS - - L ko:K03555 ko03430,map03430 ko00000,ko00001,ko03400 that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PDHDCJFA_00969 1.16e-101 tal 2.2.1.2 - F ko:K00616,ko:K08314 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PDHDCJFA_00970 9.39e-194 - - - PT - - - Domain of unknown function (DUF4974)
PDHDCJFA_00972 4.7e-197 - - - S - - - Outer membrane protein beta-barrel domain
PDHDCJFA_00973 2e-115 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PDHDCJFA_00974 3.98e-257 trpS 6.1.1.2 - J ko:K01867 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Tryptophanyl-tRNA synthetase
PDHDCJFA_00975 0.0 - - - O ko:K04656 - ko00000 Acylphosphatase
PDHDCJFA_00976 6.7e-74 hypA - - S ko:K04651 - ko00000,ko03110 Probably plays a role in a hydrogenase nickel cofactor insertion step
PDHDCJFA_00977 5.1e-162 hypB - - KO ko:K04652 - ko00000,ko03110 CobW/HypB/UreG, nucleotide-binding domain
PDHDCJFA_00979 4.11e-176 cobJ 5.4.99.60, 5.4.99.61 - H ko:K06042 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko01000 Precorrin-3B C(17)-methyltransferase
PDHDCJFA_00980 3.37e-292 cbiE 2.1.1.132 - H ko:K00595 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko01000 Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit
PDHDCJFA_00981 0.0 cobM 2.1.1.133, 2.1.1.271 - H ko:K05936 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko01000 Cobalamin biosynthesis protein CbiG
PDHDCJFA_00982 2.14e-286 algI - - M - - - alginate O-acetyltransferase
PDHDCJFA_00983 3.17e-299 ybdG_2 - - M ko:K16053 - ko00000,ko02000 Mechanosensitive ion channel
PDHDCJFA_00984 3.01e-274 ybdG_1 - - M ko:K16053 - ko00000,ko02000 Mechanosensitive ion channel
PDHDCJFA_00986 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDHDCJFA_00987 0.0 - - - S ko:K21572 - ko00000,ko02000 Pfam:SusD
PDHDCJFA_00988 1.02e-135 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PDHDCJFA_00989 9.39e-71 - - - - - - - -
PDHDCJFA_00990 0.0 - - - T - - - His Kinase A (phosphoacceptor) domain
PDHDCJFA_00991 2.16e-299 - - - T - - - Histidine kinase-like ATPases
PDHDCJFA_00992 7.67e-142 phoU - - P ko:K02039 - ko00000 Plays a role in the regulation of phosphate uptake
PDHDCJFA_00993 2.3e-297 - - - M - - - Phosphate-selective porin O and P
PDHDCJFA_00994 0.0 - 3.2.1.51 GH95 G ko:K15923 ko00511,map00511 ko00000,ko00001,ko01000 Glycosyl hydrolase family 65, N-terminal domain
PDHDCJFA_00995 2.67e-44 msbA - - V ko:K06147,ko:K11085 ko02010,map02010 ko00000,ko00001,ko01000,ko02000 ABC transporter, ATP-binding protein
PDHDCJFA_00996 0.0 - - - S - - - LVIVD repeat
PDHDCJFA_00997 2.06e-313 - - - S - - - Outer membrane protein beta-barrel domain
PDHDCJFA_00998 1.52e-118 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PDHDCJFA_00999 2.34e-102 - - - - - - - -
PDHDCJFA_01000 2.93e-119 - - - S - - - Domain of unknown function (DUF4249)
PDHDCJFA_01001 1.56e-257 - - - M - - - peptidase S41
PDHDCJFA_01002 2.01e-208 - - - S - - - Protein of unknown function (DUF3316)
PDHDCJFA_01003 0.0 parC - - L ko:K02621 - ko00000,ko01000,ko02048,ko03032,ko03036 Belongs to the type II topoisomerase GyrA ParC subunit family
PDHDCJFA_01004 0.0 rpoC 2.7.7.6 - K ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDHDCJFA_01005 1.12e-213 - - - S - - - Endonuclease/Exonuclease/phosphatase family
PDHDCJFA_01006 9.21e-212 - - - K - - - helix_turn_helix, arabinose operon control protein
PDHDCJFA_01008 0.0 - - - P ko:K02014 - ko00000,ko02000 TonB-dependent Receptor Plug Domain
PDHDCJFA_01009 5.14e-137 pnuC - - H ko:K03811 - ko00000,ko02000 nicotinamide mononucleotide transporter
PDHDCJFA_01010 5.64e-154 thiN 2.7.6.2 - H ko:K00949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 Thiamin pyrophosphokinase, catalytic domain
PDHDCJFA_01012 5.32e-141 - - - M - - - Domain of unknown function, B. Theta Gene description (DUF3868)
PDHDCJFA_01013 2.78e-152 - - - M - - - Domain of unknown function, B. Theta Gene description (DUF3868)
PDHDCJFA_01014 1.68e-137 - - - M - - - Protein of unknown function (DUF3575)
PDHDCJFA_01015 0.0 - - - V - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDHDCJFA_01016 1.61e-308 - - - MU - - - Outer membrane efflux protein
PDHDCJFA_01017 1.55e-310 - 1.1.1.136 - M ko:K02474,ko:K13015 ko00520,map00520 ko00000,ko00001,ko01000,ko01005 Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PDHDCJFA_01018 0.0 nqrF 1.6.5.8 - C ko:K00351 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway
PDHDCJFA_01019 4.31e-134 nqrE 1.6.5.8 - C ko:K00350 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PDHDCJFA_01020 1.05e-136 nqrD 1.6.5.8 - C ko:K00349 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PDHDCJFA_01021 1.06e-189 nqrC 1.6.5.8 - C ko:K00348 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PDHDCJFA_01022 1.85e-261 nqrB 1.6.5.8 - C ko:K00347 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PDHDCJFA_01023 6.59e-85 oxyR - - K ko:K04761 ko02026,map02026 ko00000,ko00001,ko03000 Transcriptional regulator
PDHDCJFA_01024 1.71e-303 - - - S - - - CarboxypepD_reg-like domain
PDHDCJFA_01025 3.14e-121 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor, Bacteroides expansion family 1
PDHDCJFA_01026 5.67e-196 - - - PT - - - FecR protein
PDHDCJFA_01027 0.0 - - - S - - - CarboxypepD_reg-like domain
PDHDCJFA_01028 0.0 - - - M ko:K21572 - ko00000,ko02000 SusD family
PDHDCJFA_01029 0.0 - - - P - - - TonB dependent receptor
PDHDCJFA_01030 2.62e-196 - - - P - - - TonB dependent receptor
PDHDCJFA_01031 4.55e-119 rimM - - J ko:K02860 - ko00000,ko03009 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PDHDCJFA_01032 2.2e-308 murA 2.5.1.7 - M ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PDHDCJFA_01033 3.59e-140 - - - S - - - Domain of unknown function (DUF4290)
PDHDCJFA_01034 6.98e-114 yncA 2.3.1.183 - M ko:K03823 ko00440,ko01130,map00440,map01130 ko00000,ko00001,ko01000 Acetyltransferase (GNAT) domain
PDHDCJFA_01035 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PDHDCJFA_01036 0.0 prpC 2.3.3.1, 2.3.3.5 - C ko:K01647,ko:K01659 ko00020,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00640,map01100,map01110,map01120,map01130,map01200,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Citrate synthase, C-terminal domain
PDHDCJFA_01037 6.27e-308 icd 1.1.1.42 - C ko:K00031 ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146 br01601,ko00000,ko00001,ko00002,ko01000 Isocitrate/isopropylmalate dehydrogenase
PDHDCJFA_01038 0.0 acnA 4.2.1.3 - C ko:K01681 ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 aconitate hydratase
PDHDCJFA_01039 1.17e-104 - - - - - - - -
PDHDCJFA_01040 3.1e-214 - - - S - - - Toxin-antitoxin system, toxin component, Fic
PDHDCJFA_01041 0.0 - - - G - - - Domain of Unknown Function (DUF1080)
PDHDCJFA_01043 5.25e-96 - - - S - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_01044 5.4e-252 - - - S - - - COG NOG26558 non supervised orthologous group
PDHDCJFA_01045 7.28e-208 - - - G - - - Xylose isomerase-like TIM barrel
PDHDCJFA_01046 3.32e-219 - - - T - - - His Kinase A (phosphoacceptor) domain
PDHDCJFA_01047 6.31e-314 rhaA 5.3.1.14 - G ko:K01813 ko00051,ko01120,map00051,map01120 ko00000,ko00001,ko01000 L-rhamnose isomerase (RhaA)
PDHDCJFA_01048 0.0 rhaB 2.7.1.5, 2.7.1.51 - G ko:K00848,ko:K00879 ko00040,ko00051,ko01120,map00040,map00051,map01120 ko00000,ko00001,ko01000 FGGY family of carbohydrate kinases, N-terminal domain
PDHDCJFA_01049 2.03e-220 - - - K - - - AraC-like ligand binding domain
PDHDCJFA_01050 1.51e-130 - - - S ko:K09955 - ko00000 Beta-L-arabinofuranosidase, GH127
PDHDCJFA_01051 1.22e-288 - - - S ko:K09955 - ko00000 Beta-L-arabinofuranosidase, GH127
PDHDCJFA_01052 3.34e-138 tdk 2.7.1.21 - F ko:K00857 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 thymidine kinase
PDHDCJFA_01053 2.63e-164 trmH 2.1.1.185 - J ko:K03218,ko:K03437 - ko00000,ko01000,ko03009,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDHDCJFA_01054 7.21e-81 - 3.5.99.10 - J ko:K09022 - ko00000,ko01000 Has endoribonuclease activity on mRNA
PDHDCJFA_01055 0.0 - - - C - - - UPF0313 protein
PDHDCJFA_01056 1.3e-151 - - - M - - - Outer membrane protein beta-barrel domain
PDHDCJFA_01057 6.04e-17 - - - - - - - -
PDHDCJFA_01058 0.0 fadD 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 Long-chain fatty acid--CoA ligase
PDHDCJFA_01059 6.39e-71 - - - K ko:K10947 - ko00000,ko03000 Transcriptional regulator
PDHDCJFA_01060 1.43e-251 - - - KT ko:K03973 - ko00000,ko02048,ko03000 PspC domain
PDHDCJFA_01061 1.14e-44 - - - S - - - Tetratricopeptide repeat
PDHDCJFA_01062 9.94e-243 - - - L - - - Domain of unknown function (DUF4837)
PDHDCJFA_01063 0.0 rsmF - - J - - - NOL1 NOP2 sun family
PDHDCJFA_01064 3.41e-168 rsmI_1 2.1.1.198 - H ko:K07056 - ko00000,ko01000,ko03009 Methyltransferase
PDHDCJFA_01065 9.88e-111 - 2.3.1.201 - S ko:K13018 ko00520,map00520 ko00000,ko00001,ko01000,ko01005 Bacterial transferase hexapeptide repeat
PDHDCJFA_01066 0.0 aspT - - S ko:K07085 - ko00000 Predicted Permease Membrane Region
PDHDCJFA_01067 1.72e-215 cbiK 4.99.1.3 - H ko:K02190 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko01000 CbiX
PDHDCJFA_01069 1.25e-265 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Biotin-lipoyl like
PDHDCJFA_01071 5.23e-172 cutC - - P ko:K06201 - ko00000 Participates in the control of copper homeostasis
PDHDCJFA_01072 0.0 ftsH - - O ko:K03798 - ko00000,ko00002,ko01000,ko01002,ko03110 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PDHDCJFA_01073 2.58e-82 rsfS - - J ko:K09710 - ko00000,ko03009 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PDHDCJFA_01075 2.96e-171 natB - - CP ko:K01992 - ko00000,ko00002,ko02000 ABC transporter permease
PDHDCJFA_01076 2.13e-128 - 5.1.3.9 - G ko:K01788 ko00520,map00520 ko00000,ko00001,ko01000 Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PDHDCJFA_01077 0.0 - 2.3.1.54, 4.1.1.83 - C ko:K00656,ko:K18427 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 ko00000,ko00001,ko01000 Pyruvate formate lyase-like
PDHDCJFA_01078 4.76e-217 pflA 1.97.1.4 - C ko:K04069 - ko00000,ko01000 4Fe-4S single cluster domain
PDHDCJFA_01079 2.1e-141 maa 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
PDHDCJFA_01080 5.02e-123 porG 1.2.7.3 - C ko:K00177 ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200 br01601,ko00000,ko00001,ko00002,ko01000 2-oxoglutarate ferredoxin oxidoreductase subunit gamma
PDHDCJFA_01081 2.82e-186 vorA 1.2.7.11, 1.2.7.3 - C ko:K00175 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 Oxidoreductase
PDHDCJFA_01082 1.19e-18 - - - - - - - -
PDHDCJFA_01083 1.56e-254 vorB 1.2.7.11, 1.2.7.3 - C ko:K00174 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA
PDHDCJFA_01084 6.06e-36 - 1.2.7.3 - C ko:K00176 ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200 br01601,ko00000,ko00001,ko00002,ko01000 4Fe-4S dicluster domain
PDHDCJFA_01088 0.0 - - - P - - - TonB dependent receptor
PDHDCJFA_01089 0.0 yngK - - S - - - Glycosyl hydrolase-like 10
PDHDCJFA_01090 9.74e-98 - - - - - - - -
PDHDCJFA_01091 0.0 - - - P - - - CarboxypepD_reg-like domain
PDHDCJFA_01092 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 - E ko:K00265,ko:K00284 ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 GXGXG motif
PDHDCJFA_01094 1.21e-40 proB 2.7.2.11 - E ko:K00931 ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PDHDCJFA_01095 7.42e-295 proA 1.2.1.41 - E ko:K00147 ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PDHDCJFA_01096 0.0 - - - T - - - PAS domain
PDHDCJFA_01097 5.7e-235 argF 2.1.3.11, 2.1.3.9 - E ko:K09065,ko:K13043 ko00220,ko01100,ko01230,map00220,map01100,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
PDHDCJFA_01098 3.63e-66 - - - T - - - Protein of unknown function (DUF3467)
PDHDCJFA_01099 0.0 - - - G - - - lipolytic protein G-D-S-L family
PDHDCJFA_01100 0.0 - - - G - - - mannose-6-phosphate isomerase, class I
PDHDCJFA_01101 0.0 bga 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 Glycosyl hydrolases family 35
PDHDCJFA_01102 3.37e-163 - - - L - - - Helix-hairpin-helix motif
PDHDCJFA_01103 4.13e-179 - - - S - - - AAA ATPase domain
PDHDCJFA_01104 7.88e-121 - - - S - - - Conserved protein domain typically associated with flavoprotein
PDHDCJFA_01105 0.0 - - - P - - - TonB-dependent receptor
PDHDCJFA_01106 0.0 - - - P - - - Psort location OuterMembrane, score
PDHDCJFA_01109 5.25e-54 - - - S - - - Protein of unknown function (DUF4099)
PDHDCJFA_01110 0.0 - - - S - - - COG NOG09947 non supervised orthologous group
PDHDCJFA_01111 1.99e-133 - 2.7.1.45 - G ko:K00874 ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 pfkB family carbohydrate kinase
PDHDCJFA_01112 6.92e-163 eda 4.1.2.14, 4.1.3.42 - G ko:K01625 ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 KDPG and KHG aldolase
PDHDCJFA_01113 0.0 uxaC 5.3.1.12 - G ko:K01812 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 Glucuronate isomerase
PDHDCJFA_01115 0.0 - - - P ko:K02014 - ko00000,ko02000 Psort location OuterMembrane, score 10.00
PDHDCJFA_01116 1.53e-128 - - - K - - - helix_turn_helix, Lux Regulon
PDHDCJFA_01117 7.74e-162 - - - K ko:K07322 - ko00000 Di-iron-containing protein involved in the repair of iron-sulfur clusters
PDHDCJFA_01118 3.58e-154 - - - G - - - Xylose isomerase-like TIM barrel
PDHDCJFA_01121 3.41e-172 - 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Dehydrogenase
PDHDCJFA_01122 6.39e-107 aepX 2.7.7.15, 2.7.7.39, 5.4.2.9 - IM ko:K00968,ko:K00980,ko:K01841 ko00440,ko00564,ko01100,ko01120,ko01130,ko05231,map00440,map00564,map01100,map01120,map01130,map05231 ko00000,ko00001,ko00002,ko01000 Glycerol-3-phosphate cytidylyltransferase
PDHDCJFA_01123 2.17e-266 pdxA 1.1.1.262 - C ko:K00097 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the PdxA family
PDHDCJFA_01124 3.24e-249 - - - L - - - Domain of unknown function (DUF4837)
PDHDCJFA_01125 8.44e-155 rlmN 2.1.1.192 - J ko:K06941 - ko00000,ko01000,ko03009 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PDHDCJFA_01126 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDHDCJFA_01127 2.93e-165 - - - KT - - - LytTr DNA-binding domain
PDHDCJFA_01128 4.69e-283 - - - - - - - -
PDHDCJFA_01130 2.65e-300 - - - - - - - -
PDHDCJFA_01131 0.0 - - - U - - - WD40-like Beta Propeller Repeat
PDHDCJFA_01133 2.66e-289 serB 3.1.3.3 - ET ko:K01079 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01009 phosphoserine phosphatase
PDHDCJFA_01134 1.66e-143 - - - S - - - COG NOG28134 non supervised orthologous group
PDHDCJFA_01135 0.0 - - - P - - - Psort location OuterMembrane, score 9.52
PDHDCJFA_01137 0.0 - - - EGP ko:K08138 - ko00000,ko02000 Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PDHDCJFA_01138 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 Efflux ABC transporter, permease protein
PDHDCJFA_01141 2.89e-90 - - - - - - - -
PDHDCJFA_01142 2.41e-150 - - - - - - - -
PDHDCJFA_01143 0.0 - - - - - - - -
PDHDCJFA_01144 2.15e-195 kdsB 2.7.7.38 - M ko:K00979 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
PDHDCJFA_01145 2.65e-131 - - - S - - - Zeta toxin
PDHDCJFA_01149 1.1e-179 - - - F - - - NUDIX domain
PDHDCJFA_01150 0.0 xylB_2 2.7.1.17 - G ko:K00854 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 FGGY family of carbohydrate kinases, N-terminal domain
PDHDCJFA_01151 0.0 fusA - - J ko:K02355 - ko00000,ko03012,ko03029 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PDHDCJFA_01152 7.72e-86 rpsG - - J ko:K02992 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PDHDCJFA_01153 1.52e-89 rpsL - - J ko:K02950 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PDHDCJFA_01154 6.95e-132 - - - L - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_01155 2.02e-46 - - - - - - - -
PDHDCJFA_01156 2.53e-240 gap 1.2.1.12 - G ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PDHDCJFA_01157 8.94e-221 miaA2 2.5.1.75 - F ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 ko00000,ko00001,ko01000,ko01006,ko03016 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PDHDCJFA_01158 3.14e-185 kdsA 2.5.1.55 - M ko:K01627 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Belongs to the KdsA family
PDHDCJFA_01159 1.27e-158 - - - K ko:K21556 - ko00000,ko03000 Crp Fnr family
PDHDCJFA_01160 4.78e-55 rpmE2 - - J ko:K02909 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 50S ribosomal protein L31 type B
PDHDCJFA_01161 3.9e-267 mdsC - - S - - - Phosphotransferase enzyme family
PDHDCJFA_01162 8.31e-91 - - - E - - - Stress responsive alpha-beta barrel domain protein
PDHDCJFA_01163 3.76e-304 - - - T - - - PAS domain
PDHDCJFA_01164 2.04e-194 - - - T ko:K02481 - ko00000,ko02022 Sigma-54 interaction domain
PDHDCJFA_01165 0.0 - - - G - - - Glycosyl hydrolase family 92
PDHDCJFA_01166 0.0 - - - G - - - Glycosyl hydrolase family 92
PDHDCJFA_01167 0.0 - - - G - - - Glycosyl hydrolase family 92
PDHDCJFA_01168 0.0 - - - T - - - Histidine kinase
PDHDCJFA_01169 6.63e-194 - - - S - - - Tetratricopeptide repeats
PDHDCJFA_01170 0.0 lepA - - M ko:K03596 ko05134,map05134 ko00000,ko00001 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PDHDCJFA_01171 5.97e-205 yitL - - S ko:K00243 - ko00000 S1 domain
PDHDCJFA_01172 1.38e-159 ftsE - - D ko:K09812 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03036 ABC transporter, ATP-binding protein
PDHDCJFA_01173 1.65e-139 hisI 3.5.4.19, 3.6.1.31 - E ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Histidine biosynthesis bifunctional protein hisIE
PDHDCJFA_01174 1.33e-178 hisF - - E ko:K02500 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PDHDCJFA_01175 2.13e-169 hisA 5.3.1.16 - E ko:K01814 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Histidine biosynthesis protein
PDHDCJFA_01176 2.55e-142 hisH - - E ko:K02501 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PDHDCJFA_01179 0.0 - - - T - - - His Kinase A (phospho-acceptor) domain
PDHDCJFA_01180 1.83e-247 - - - P ko:K02050 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PDHDCJFA_01181 5.12e-125 lipA 2.8.1.8 - H ko:K03644 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
PDHDCJFA_01182 3.29e-258 - - - I - - - Psort location CytoplasmicMembrane, score 10.00
PDHDCJFA_01183 2.36e-121 - - - S ko:K07095 - ko00000 Phosphoesterase
PDHDCJFA_01185 1.82e-135 - - - L - - - Belongs to the DEAD box helicase family
PDHDCJFA_01186 0.0 rho - - K ko:K03628 ko03018,map03018 ko00000,ko00001,ko03019,ko03021 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PDHDCJFA_01187 0.0 tilS 6.3.4.19 - D ko:K04075 - ko00000,ko01000,ko03016 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PDHDCJFA_01189 0.0 - - - P - - - Protein of unknown function (DUF4435)
PDHDCJFA_01190 0.0 arnT - - M - - - Dolichyl-phosphate-mannose-protein mannosyltransferase
PDHDCJFA_01191 1.14e-37 - - - S - - - Protein of unknown function (DUF1573)
PDHDCJFA_01192 4.36e-205 - - - S - - - TolB-like 6-blade propeller-like
PDHDCJFA_01193 1.39e-279 - - - S - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_01194 1.33e-223 cysE 2.3.1.30 - E ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 ko00000,ko00001,ko00002,ko01000 Serine acetyltransferase
PDHDCJFA_01195 1.23e-75 ycgE - - K - - - Transcriptional regulator
PDHDCJFA_01196 2.52e-237 - - - M - - - Peptidase, M23
PDHDCJFA_01197 0.0 alaS 6.1.1.7 - J ko:K01872 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PDHDCJFA_01198 0.0 argH 4.3.2.1 - E ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 argininosuccinate lyase
PDHDCJFA_01199 1.03e-92 - - - E - - - oxidoreductase activity, acting on CH-OH group of donors
PDHDCJFA_01200 1.51e-146 pyrE 2.4.2.10, 4.1.1.23 - F ko:K00762,ko:K13421 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PDHDCJFA_01201 6.39e-166 comF 2.4.2.14 - S ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 Phosphoribosyl transferase domain
PDHDCJFA_01202 7.87e-111 recX - - S ko:K03565 - ko00000,ko03400 Modulates RecA activity
PDHDCJFA_01203 1.83e-54 prmC 2.1.1.297 - J ko:K02493 - ko00000,ko01000,ko03012 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PDHDCJFA_01204 2.71e-39 mutS2 - - L ko:K07456 ko03430,map03430 ko00000,ko00001,ko03400 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PDHDCJFA_01205 8.33e-254 corA - - P ko:K03284 - ko00000,ko02000 Mediates influx of magnesium ions
PDHDCJFA_01206 6.98e-137 - - - L - - - Resolvase, N terminal domain
PDHDCJFA_01207 5.72e-263 - - - S - - - Winged helix DNA-binding domain
PDHDCJFA_01208 2.33e-65 - - - S - - - Putative zinc ribbon domain
PDHDCJFA_01209 2.82e-137 - - - K - - - COG COG2207 AraC-type DNA-binding domain-containing proteins
PDHDCJFA_01210 0.0 - - - S - - - Sulfatase-modifying factor enzyme 1
PDHDCJFA_01211 1.14e-277 - - - P ko:K02016 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Periplasmic binding protein
PDHDCJFA_01212 2.82e-227 - - - P ko:K02015 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PDHDCJFA_01213 2.84e-239 fhuC 3.6.3.34 - HP ko:K02013 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PDHDCJFA_01214 1.72e-52 - - - G - - - Binding-protein-dependent transport system inner membrane component
PDHDCJFA_01215 0.0 - - - G - - - Domain of unknown function (DUF4091)
PDHDCJFA_01216 1.32e-275 - - - C - - - Radical SAM domain protein
PDHDCJFA_01217 2.05e-17 - - - - - - - -
PDHDCJFA_01218 1.23e-119 - - - - - - - -
PDHDCJFA_01220 2.43e-53 - - - - - - - -
PDHDCJFA_01221 0.0 potD - - P ko:K11069 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
PDHDCJFA_01222 5.11e-146 yihX 3.1.3.10, 3.1.3.104 - S ko:K07025,ko:K20866,ko:K21063 ko00010,ko00740,ko01100,ko01110,ko01120,map00010,map00740,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000 Haloacid dehalogenase-like hydrolase
PDHDCJFA_01223 6.3e-151 yhhQ - - U ko:K09125 - ko00000 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
PDHDCJFA_01224 8.84e-141 - - - S - - - Protein of unknown function (DUF2490)
PDHDCJFA_01225 1.31e-231 ybhS - - V ko:K01992 - ko00000,ko00002,ko02000 Transport permease protein
PDHDCJFA_01226 1.44e-149 - - - G ko:K01990 - ko00000,ko00002,ko02000 AAA domain, putative AbiEii toxin, Type IV TA system
PDHDCJFA_01227 5.32e-218 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
PDHDCJFA_01228 1.57e-204 - - - M ko:K01993 - ko00000 HlyD family secretion protein
PDHDCJFA_01230 4.68e-197 - - - S ko:K07001 - ko00000 Phospholipase
PDHDCJFA_01231 0.0 amyA2 - - G - - - Alpha amylase, catalytic domain protein
PDHDCJFA_01232 3.89e-09 - - - - - - - -
PDHDCJFA_01233 4.95e-63 - - - S ko:K07075 - ko00000 Nucleotidyltransferase domain
PDHDCJFA_01234 5.34e-149 - - - M - - - Domain of unknown function (DUF1972)
PDHDCJFA_01235 2.64e-61 - - - T ko:K03803 - ko00000,ko03021 Positive regulator of sigma(E), RseC MucC
PDHDCJFA_01236 1.14e-204 rnfB - - C ko:K03616 - ko00000 Ferredoxin
PDHDCJFA_01237 3.73e-300 rnfC - - C ko:K03615 - ko00000 Part of a membrane complex involved in electron transport
PDHDCJFA_01238 3.26e-226 rnfD - - C ko:K03614 - ko00000 Part of a membrane complex involved in electron transport
PDHDCJFA_01241 2.98e-112 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PDHDCJFA_01242 0.0 - - - S - - - Domain of Unknown Function with PDB structure (DUF3863)
PDHDCJFA_01243 0.0 - - - - - - - -
PDHDCJFA_01244 4.29e-175 yehT_1 - - KT - - - LytTr DNA-binding domain
PDHDCJFA_01245 0.0 dacB 3.4.16.4 - M ko:K07259 ko00550,map00550 ko00000,ko00001,ko01000,ko01002,ko01011 D-alanyl-D-alanine carboxypeptidase
PDHDCJFA_01246 6.37e-268 - - - S - - - Permease
PDHDCJFA_01248 0.0 gyrA 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDHDCJFA_01249 3.56e-159 lipB 2.3.1.181 - H ko:K03801 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate
PDHDCJFA_01250 7.44e-188 mtgA 2.4.1.129 GT51 M ko:K03814 ko00550,map00550 ko00000,ko00001,ko01000,ko01003,ko01011 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
PDHDCJFA_01251 0.0 - 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 AMP-binding enzyme
PDHDCJFA_01252 5.31e-115 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PDHDCJFA_01253 1.78e-24 - - - - - - - -
PDHDCJFA_01254 1.13e-15 - - - S ko:K19157 - ko00000,ko01000,ko02048 Bacterial toxin of type II toxin-antitoxin system, YafQ
PDHDCJFA_01255 2.97e-96 - - - O ko:K13963 ko05146,map05146 ko00000,ko00001 SERine Proteinase INhibitors
PDHDCJFA_01256 4.56e-136 folE 3.5.4.16 - F ko:K01495 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 GTP cyclohydrolase 1
PDHDCJFA_01257 1.21e-115 - - - S - - - Sporulation related domain
PDHDCJFA_01258 9.21e-112 menD 2.2.1.9 - H ko:K02551 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
PDHDCJFA_01259 4.18e-198 menB 4.1.3.36 - H ko:K01661 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PDHDCJFA_01260 2.16e-259 menC - - M - - - Mandelate racemase muconate lactonizing enzyme
PDHDCJFA_01261 1.25e-220 menE 6.2.1.26 - IQ ko:K01911 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 O-succinylbenzoic acid--CoA ligase
PDHDCJFA_01262 3.96e-105 - 2.6.1.59 - E ko:K02805 - ko00000,ko01000,ko01007 DegT/DnrJ/EryC1/StrS aminotransferase family
PDHDCJFA_01263 1.66e-138 - - - M - - - Bacterial sugar transferase
PDHDCJFA_01264 0.0 cap5D - - GM - - - Polysaccharide biosynthesis protein
PDHDCJFA_01267 0.0 - - - G - - - COG COG0383 Alpha-mannosidase
PDHDCJFA_01268 6.36e-197 - - - G - - - Major Facilitator
PDHDCJFA_01269 4.39e-176 proC 1.5.1.2 - E ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PDHDCJFA_01270 8.38e-285 - - - E ko:K00318 ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130 ko00000,ko00001,ko01000 Proline dehydrogenase
PDHDCJFA_01271 0.0 pruA 1.2.1.88, 1.5.5.2 - C ko:K00294,ko:K13821 ko00250,ko00330,ko01100,ko01110,ko01130,map00250,map00330,map01100,map01110,map01130 ko00000,ko00001,ko01000,ko03000 1-pyrroline-5-carboxylate dehydrogenase
PDHDCJFA_01272 0.0 - - - S - - - Endonuclease/Exonuclease/phosphatase family
PDHDCJFA_01273 1.3e-299 pbuX - - F ko:K16345 - ko00000,ko02000 Permease family
PDHDCJFA_01274 5.38e-131 xpt 2.4.2.22 - F ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000 Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PDHDCJFA_01275 5.64e-161 - - - T - - - LytTr DNA-binding domain
PDHDCJFA_01276 9e-248 - - - T - - - Histidine kinase
PDHDCJFA_01277 0.0 - - - H - - - Outer membrane protein beta-barrel family
PDHDCJFA_01278 0.0 secD - - U ko:K03072,ko:K12257 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
PDHDCJFA_01279 1.35e-212 - - - L - - - Phage integrase, N-terminal SAM-like domain
PDHDCJFA_01280 0.0 - - - H - - - TonB dependent receptor
PDHDCJFA_01281 2.53e-207 - - - - - - - -
PDHDCJFA_01282 0.0 - - - U - - - Phosphate transporter
PDHDCJFA_01283 1.37e-128 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PDHDCJFA_01284 1.47e-208 map 3.4.11.18 - E ko:K01265 - ko00000,ko01000,ko01002 Metallopeptidase family M24
PDHDCJFA_01285 1.88e-228 - - - S - - - AI-2E family transporter
PDHDCJFA_01286 1.03e-282 - 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Belongs to the metallo-dependent hydrolases superfamily. NagA family
PDHDCJFA_01287 1.54e-171 - - - M - - - Peptidase family S41
PDHDCJFA_01288 6.49e-65 - - - S - - - Helix-turn-helix domain
PDHDCJFA_01289 2.06e-100 - - - H - - - Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PDHDCJFA_01290 1.19e-313 - - - T ko:K07713 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Psort location Cytoplasmic, score
PDHDCJFA_01291 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDHDCJFA_01292 0.0 - - - L - - - Helicase associated domain
PDHDCJFA_01293 0.0 - 2.7.7.13 - M ko:K00971 ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Nucleotidyl transferase
PDHDCJFA_01294 9.81e-233 fcl 1.1.1.271 - GM ko:K02377 ko00051,ko00520,ko01100,map00051,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction
PDHDCJFA_01295 1.78e-266 gmd 4.2.1.47 - M ko:K01711 ko00051,ko00520,ko01100,map00051,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
PDHDCJFA_01296 2.08e-123 - 2.4.1.187 GT26 M ko:K05946 ko05111,map05111 ko00000,ko00001,ko01000,ko01003 Glycosyl transferase WecB/TagA/CpsF family
PDHDCJFA_01297 1.05e-97 - - - M - - - -O-antigen
PDHDCJFA_01298 9.67e-123 - - - M - - - PFAM Glycosyl transferase, group 1
PDHDCJFA_01299 2.82e-92 - - - M - - - Glycosyl transferases group 1
PDHDCJFA_01300 3.35e-117 - - - M - - - Glycosyltransferase, group 1 family protein
PDHDCJFA_01302 1.62e-32 - - - M - - - Glycosyltransferase like family 2
PDHDCJFA_01303 3.67e-17 - - - G - - - Acyltransferase family
PDHDCJFA_01305 2.58e-33 - - - M - - - Glycosyltransferase group 2 family protein
PDHDCJFA_01306 1.05e-36 - - - M - - - Glycosyltransferase, group 1 family protein
PDHDCJFA_01307 2.24e-211 - - - S - - - Fimbrillin-A associated anchor proteins Mfa1 and Mfa2
PDHDCJFA_01309 1.29e-88 - - - S - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_01310 1.55e-134 - - - S - - - VirE N-terminal domain
PDHDCJFA_01311 1.75e-100 - - - - - - - -
PDHDCJFA_01312 3.04e-09 - - - - - - - -
PDHDCJFA_01313 1.78e-38 vapC - - S ko:K18828 - ko00000,ko01000,ko02048,ko03016 Toxic component of a toxin-antitoxin (TA) module. An RNase
PDHDCJFA_01314 2.98e-43 - - - S - - - Nucleotidyltransferase domain
PDHDCJFA_01315 1.55e-295 queA 2.4.99.17 - H ko:K07568 - ko00000,ko01000,ko03016 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PDHDCJFA_01316 0.0 - - - MU ko:K03640 - ko00000,ko02000 Belongs to the ompA family
PDHDCJFA_01318 1.42e-223 - - - M - - - glycosyl transferase family 2
PDHDCJFA_01319 3.69e-47 - - - K - - - Tetratricopeptide repeat protein
PDHDCJFA_01320 2.47e-271 - - - CO - - - Domain of unknown function (DUF4369)
PDHDCJFA_01321 4.13e-99 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PDHDCJFA_01322 0.0 dnaE 2.7.7.7 - L ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA-directed DNA polymerase
PDHDCJFA_01325 4.32e-297 nusA - - K ko:K02600 - ko00000,ko03009,ko03021 Participates in both transcription termination and antitermination
PDHDCJFA_01326 7.72e-99 rimP - - S ko:K09748 - ko00000,ko03009 Required for maturation of 30S ribosomal subunits
PDHDCJFA_01328 1.07e-208 - 2.7.1.4 - G ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 ko00000,ko00001,ko01000 pfkB family
PDHDCJFA_01329 0.0 sacC 3.2.1.80 - G ko:K03332 ko00051,map00051 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PDHDCJFA_01330 2.03e-39 uvrA1 - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PDHDCJFA_01331 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
PDHDCJFA_01332 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDHDCJFA_01333 5.12e-192 pdxS 4.3.3.6 - H ko:K06215 ko00750,map00750 ko00000,ko00001,ko01000 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
PDHDCJFA_01334 1.45e-129 pdxT 4.3.3.6 - H ko:K08681 ko00750,map00750 ko00000,ko00001,ko01000 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
PDHDCJFA_01335 3.51e-176 - - - S - - - ATPase domain predominantly from Archaea
PDHDCJFA_01336 5.17e-178 - - - T ko:K02477 - ko00000,ko02022 COG3279 Response regulator of the LytR AlgR family
PDHDCJFA_01338 1.13e-252 - - - I - - - Alpha/beta hydrolase family
PDHDCJFA_01339 0.0 - - - S - - - Capsule assembly protein Wzi
PDHDCJFA_01340 2.78e-129 psd 4.1.1.65 - I ko:K01613 ko00564,ko01100,ko01110,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)
PDHDCJFA_01341 1.55e-159 pssA 2.7.8.8 - I ko:K17103 ko00260,ko00564,ko01100,ko01110,map00260,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PDHDCJFA_01342 2.73e-26 - - - S - - - Domain of unknown function (DUF4834)
PDHDCJFA_01343 4.77e-100 tadA 3.5.4.33 - FJ ko:K11991 - ko00000,ko01000,ko03016 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PDHDCJFA_01344 6.29e-47 - - - S - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_01345 8.47e-84 - - - L ko:K07460 - ko00000 Belongs to the UPF0102 family
PDHDCJFA_01346 3.25e-85 - - - S - - - YjbR
PDHDCJFA_01347 3.35e-167 birA 6.3.4.15 - H ko:K03524 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko01000,ko03000 Biotin/lipoate A/B protein ligase family
PDHDCJFA_01348 0.0 ybaL_1 - - P - - - Sodium/hydrogen exchanger family
PDHDCJFA_01349 1.15e-235 - - - C - - - Nitroreductase
PDHDCJFA_01353 6.68e-196 vicX - - S - - - metallo-beta-lactamase
PDHDCJFA_01355 6.82e-29 - - - UW - - - Hep Hag repeat protein
PDHDCJFA_01357 2.69e-183 - - - S - - - Tetratricopeptide repeat
PDHDCJFA_01358 0.0 - - - G - - - Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
PDHDCJFA_01359 7.34e-177 - - - C - - - 4Fe-4S binding domain
PDHDCJFA_01360 8.19e-82 - - - CO - - - SCO1/SenC
PDHDCJFA_01364 2.61e-237 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDHDCJFA_01365 1.15e-44 - - - MU - - - outer membrane efflux protein
PDHDCJFA_01366 1.13e-48 yidD - - S ko:K08998 - ko00000 Could be involved in insertion of integral membrane proteins into the membrane
PDHDCJFA_01367 1.06e-83 rnpA 3.1.26.5 - J ko:K03536 - ko00000,ko01000,ko03016 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PDHDCJFA_01368 2.31e-180 hemD 4.2.1.75 - H ko:K01719 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000 Uroporphyrinogen-III synthase
PDHDCJFA_01369 6.1e-170 - - - S - - - Domain of unknown function (DUF4271)
PDHDCJFA_01370 9.28e-317 lpdA 1.8.1.4 - C ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 Dihydrolipoyl dehydrogenase
PDHDCJFA_01371 2.94e-107 purE 5.4.99.18 - F ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PDHDCJFA_01372 4.51e-84 gcvH - - E ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 ko00000,ko00001,ko00002 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
PDHDCJFA_01373 8.04e-135 - - - I - - - Psort location CytoplasmicMembrane, score 10.00
PDHDCJFA_01374 0.0 rpoN - - K ko:K03092 ko02020,ko05111,map02020,map05111 ko00000,ko00001,ko03021 RNA polymerase sigma54 factor
PDHDCJFA_01375 1.57e-41 - - - L - - - DNA integration
PDHDCJFA_01376 4.22e-33 - - - L - - - SMART ATPase, AAA type, core
PDHDCJFA_01377 4.32e-313 lysC 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the aspartokinase family
PDHDCJFA_01378 3.26e-251 covS - - T - - - HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PDHDCJFA_01380 0.00028 - - - S - - - Plasmid stabilization system
PDHDCJFA_01381 0.0 nadE 6.3.5.1 - H ko:K01950 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PDHDCJFA_01382 2.15e-247 - - - D - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_01383 1.18e-231 - - - K - - - Participates in transcription elongation, termination and antitermination
PDHDCJFA_01384 4.05e-95 - - - - - - - -
PDHDCJFA_01387 1.4e-260 mraY2 - - M - - - UDP-N-acetylmuramyl pentapeptide phosphotransferase
PDHDCJFA_01388 3.52e-11 - - - S - - - Protein of unknown function (DUF3791)
PDHDCJFA_01391 3.97e-169 - - - T - - - Y_Y_Y domain
PDHDCJFA_01392 7.09e-316 cstA - - T ko:K06200 - ko00000 Carbon starvation protein
PDHDCJFA_01393 5.67e-176 rprY - - K - - - COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PDHDCJFA_01394 0.0 - 2.7.13.3 - T ko:K07636 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDHDCJFA_01395 8.73e-259 - - - T - - - Psort location CytoplasmicMembrane, score 7.88
PDHDCJFA_01396 1.89e-82 - - - K - - - LytTr DNA-binding domain
PDHDCJFA_01397 8.77e-158 - - - T - - - Inner membrane component of T3SS, cytoplasmic domain
PDHDCJFA_01399 2e-120 - - - T - - - FHA domain
PDHDCJFA_01400 0.0 pflB 2.3.1.54 - C ko:K00656 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 9.97
PDHDCJFA_01401 1.7e-182 pflA 1.97.1.4 - C ko:K04069 - ko00000,ko01000 Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PDHDCJFA_01402 1.98e-133 - - - T - - - Cyclic nucleotide-binding domain protein
PDHDCJFA_01403 3.89e-133 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PDHDCJFA_01404 1.69e-131 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PDHDCJFA_01405 2.47e-136 ahpC 1.11.1.15 - O ko:K03386 ko04214,map04214 ko00000,ko00001,ko01000,ko04147 alkyl hydroperoxide reductase
PDHDCJFA_01406 0.0 ahpF - - C ko:K03387 - ko00000,ko01000 NADH dehydrogenase
PDHDCJFA_01407 5.48e-78 - - - - - - - -
PDHDCJFA_01408 1.26e-151 - - - S ko:K09702 - ko00000 Protein of unknown function (DUF1349)
PDHDCJFA_01409 8.98e-128 - - - K - - - Helix-turn-helix XRE-family like proteins
PDHDCJFA_01410 0.0 acsA 6.2.1.1, 6.2.1.32 - I ko:K01895,ko:K08295 ko00010,ko00620,ko00627,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00627,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko01004 AMP-binding enzyme C-terminal domain
PDHDCJFA_01411 3.96e-172 - - - V ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
PDHDCJFA_01412 5.56e-255 - - - M ko:K02005 - ko00000 HlyD family secretion protein
PDHDCJFA_01413 6.21e-200 - - - S - - - COG NOG14441 non supervised orthologous group
PDHDCJFA_01414 0.0 - - - H - - - lysine biosynthetic process via aminoadipic acid
PDHDCJFA_01415 7.54e-107 - - - MU - - - Efflux transporter, outer membrane factor
PDHDCJFA_01416 1.28e-55 - - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 regulation of translation
PDHDCJFA_01417 6.74e-112 - - - - - - - -
PDHDCJFA_01420 1.2e-234 yfeX - - P ko:K07223 - ko00000 Dyp-type peroxidase family
PDHDCJFA_01421 3.87e-298 bglB_4 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 hydrolase, family 3
PDHDCJFA_01422 6.69e-58 bglB_4 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 hydrolase, family 3
PDHDCJFA_01423 0.0 kdpB 3.6.3.12 - P ko:K01547 ko02020,map02020 ko00000,ko00001,ko01000 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
PDHDCJFA_01424 0.0 kdpA 3.6.3.12 - P ko:K01546 ko02020,map02020 ko00000,ko00001,ko01000 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
PDHDCJFA_01426 0.0 - - - S - - - PA14
PDHDCJFA_01427 0.0 sulP - - P ko:K03321 - ko00000,ko02000 Sulfate permease
PDHDCJFA_01428 0.0 guaB 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
PDHDCJFA_01429 0.0 recQ 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
PDHDCJFA_01430 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 beta-galactosidase
PDHDCJFA_01431 3.19e-240 - - - CO - - - Domain of unknown function (DUF4369)
PDHDCJFA_01432 2.29e-178 - - - C - - - 4Fe-4S dicluster domain
PDHDCJFA_01434 2.41e-249 mltG - - S ko:K07082 - ko00000 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PDHDCJFA_01435 0.0 iorA 1.2.7.8 - C ko:K00179 - br01601,ko00000,ko01000 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates
PDHDCJFA_01436 1.66e-132 iorB 1.2.7.8 - C ko:K00180 - br01601,ko00000,ko01000 Indolepyruvate
PDHDCJFA_01437 1.58e-27 - - - S - - - Domain of unknown function (DUF4295)
PDHDCJFA_01438 4.97e-36 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL33 family
PDHDCJFA_01439 1.8e-50 rpmB - - J ko:K02902 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL28 family
PDHDCJFA_01440 3.57e-145 - - - S ko:K07078 - ko00000 Nitroreductase family
PDHDCJFA_01441 0.0 lpdA 1.8.1.4 - C ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 Dihydrolipoyl dehydrogenase
PDHDCJFA_01442 2.81e-178 lplA 6.3.1.20 - H ko:K03800 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Lipoate-protein ligase
PDHDCJFA_01443 2.96e-91 - - - - - - - -
PDHDCJFA_01444 1.68e-313 - - - S - - - Porin subfamily
PDHDCJFA_01445 0.0 - - - P ko:K03324 - ko00000,ko02000 Na Pi-cotransporter II-like protein
PDHDCJFA_01447 3.99e-312 ftsZ - - D ko:K03531 ko04112,map04112 ko00000,ko00001,ko02048,ko03036,ko04812 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PDHDCJFA_01448 3.47e-289 ftsA - - D ko:K03590 ko04112,map04112 ko00000,ko00001,ko03036,ko04812 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PDHDCJFA_01449 4.45e-168 ftsQ - - M ko:K03589 ko04112,map04112 ko00000,ko00001,ko03036 Cell division protein FtsQ
PDHDCJFA_01450 6.29e-42 murC 6.3.2.8 - M ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Belongs to the MurCDEF family
PDHDCJFA_01451 0.0 secA - - U ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PDHDCJFA_01452 7.63e-44 - 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the synthesis of xanthosine monophosphate by the NAD dependent oxidation of inosine monophosphate
PDHDCJFA_01453 0.0 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 Glycosyl hydrolase family 36 C-terminal domain
PDHDCJFA_01454 2.23e-202 - - - K - - - helix_turn_helix, arabinose operon control protein
PDHDCJFA_01455 0.0 rpsA - - J ko:K02945 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence
PDHDCJFA_01456 4.04e-52 - - - S - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_01457 1.29e-149 - 3.1.3.18 - S ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
PDHDCJFA_01458 0.0 - - - E - - - Prolyl oligopeptidase family
PDHDCJFA_01459 2.52e-197 nagB 3.5.99.6 - G ko:K02564 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PDHDCJFA_01460 9.39e-73 secG - - U ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase
PDHDCJFA_01461 2.04e-175 - - - S - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_01462 2.05e-121 lptE - - S - - - Lipopolysaccharide-assembly
PDHDCJFA_01463 7.52e-283 fhlA - - K - - - ATPase (AAA
PDHDCJFA_01464 9.8e-78 - - - I - - - Phosphate acyltransferases
PDHDCJFA_01465 9.83e-163 rluC 5.4.99.23, 5.4.99.28, 5.4.99.29 - J ko:K06177,ko:K06180 - ko00000,ko01000,ko03009,ko03016 Pseudouridine synthase
PDHDCJFA_01466 7.67e-256 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDHDCJFA_01467 0.0 - - - V - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDHDCJFA_01468 1.61e-304 - - - V - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDHDCJFA_01469 5.3e-110 - - - C ko:K02121 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002 subunit E
PDHDCJFA_01470 9.58e-122 paiA - - K - - - Acetyltransferase (GNAT) domain
PDHDCJFA_01472 1.51e-206 - - - EG - - - EamA-like transporter family
PDHDCJFA_01473 3.27e-32 - - - P - - - Transporter, major facilitator family protein
PDHDCJFA_01474 2.12e-54 - - - P - - - Transporter, major facilitator family protein
PDHDCJFA_01475 3.21e-270 - - - S ko:K21572 - ko00000,ko02000 Pfam:SusD
PDHDCJFA_01478 0.0 wbpM - - GM - - - Polysaccharide biosynthesis protein
PDHDCJFA_01479 6.54e-102 - - - - - - - -
PDHDCJFA_01480 6.14e-155 - - - K - - - Participates in transcription elongation, termination and antitermination
PDHDCJFA_01481 3.44e-37 - - - M - - - sugar transferase
PDHDCJFA_01482 0.0 - - - P ko:K03281 - ko00000 Chloride channel protein
PDHDCJFA_01483 5.24e-229 fmt 2.1.2.9 - J ko:K00604 ko00670,ko00970,map00670,map00970 ko00000,ko00001,ko01000 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PDHDCJFA_01484 2.25e-83 - - - S ko:K09790 - ko00000 Protein of unknown function (DUF454)
PDHDCJFA_01485 2.15e-32 katA 1.11.1.6 - P ko:K03781 ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014 ko00000,ko00001,ko00002,ko01000 Belongs to the catalase family
PDHDCJFA_01486 9.49e-317 - - - M - - - Peptidase family M23
PDHDCJFA_01487 4.58e-82 yccF - - S - - - Inner membrane component domain
PDHDCJFA_01488 5.52e-204 murI 5.1.1.3 - M ko:K01776 ko00471,ko01100,map00471,map01100 ko00000,ko00001,ko01000,ko01011 Provides the (R)-glutamate required for cell wall biosynthesis
PDHDCJFA_01489 4.84e-172 thiE 2.5.1.3 - H ko:K00788 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PDHDCJFA_01490 0.0 thiC 4.1.99.17 - H ko:K03147 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PDHDCJFA_01491 2.25e-204 - - - S - - - Patatin-like phospholipase
PDHDCJFA_01492 0.0 - - - P ko:K07787,ko:K15726 ko02020,map02020 ko00000,ko00001,ko02000 AcrB/AcrD/AcrF family
PDHDCJFA_01493 0.0 - - - S - - - Domain of unknown function (DUF3440)
PDHDCJFA_01494 6.68e-125 ibrB - - K - - - ParB-like nuclease domain
PDHDCJFA_01495 2.9e-41 - - - G - - - beta-N-acetylhexosaminidase activity
PDHDCJFA_01496 2.03e-56 - - - - - - - -
PDHDCJFA_01497 8.89e-184 - - - - - - - -
PDHDCJFA_01498 8.12e-262 prfA - - J ko:K02835 - ko00000,ko03012 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PDHDCJFA_01499 2.95e-201 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the OMP decarboxylase family. Type 2 subfamily
PDHDCJFA_01500 1.78e-164 lpxD 2.3.1.191 - M ko:K02536 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PDHDCJFA_01501 4.42e-273 entC 5.4.4.2 - HQ ko:K02361,ko:K02552 ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Isochorismate synthase
PDHDCJFA_01502 4.12e-294 ydiI 3.1.2.28 - Q ko:K19222 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Thioesterase superfamily
PDHDCJFA_01503 1.02e-255 manC 2.7.7.13 - M ko:K00971 ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110 ko00000,ko00001,ko00002,ko01000 mannose-1-phosphate guanylyltransferase
PDHDCJFA_01504 6.8e-208 lolE - - M ko:K09808,ko:K09815 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Efflux ABC transporter, permease protein
PDHDCJFA_01505 1.09e-68 rbfA - - J ko:K02834 - ko00000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PDHDCJFA_01506 4.02e-151 - 2.1.1.104 - S ko:K00588 ko00360,ko00940,ko00941,ko00945,ko01100,ko01110,map00360,map00940,map00941,map00945,map01100,map01110 ko00000,ko00001,ko00002,ko01000 O-Methyltransferase
PDHDCJFA_01507 0.0 pyk 2.7.1.40 - G ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the pyruvate kinase family
PDHDCJFA_01508 6.41e-51 batB - - S ko:K07114 - ko00000,ko02000 Von Willebrand factor type A domain
PDHDCJFA_01509 6.79e-126 batC - - S - - - Tetratricopeptide repeat
PDHDCJFA_01510 0.0 batD - - S - - - Oxygen tolerance
PDHDCJFA_01511 2.69e-180 batE - - T - - - Tetratricopeptide repeat
PDHDCJFA_01512 3.84e-140 - 3.6.1.27 - I ko:K19302 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Acid phosphatase homologues
PDHDCJFA_01513 1.94e-59 - - - S - - - DNA-binding protein
PDHDCJFA_01514 6.74e-267 uspA - - T - - - Belongs to the universal stress protein A family
PDHDCJFA_01516 8.23e-106 mgsA 4.2.3.3 - G ko:K01734 ko00640,ko01120,map00640,map01120 ko00000,ko00001,ko01000 methylglyoxal synthase
PDHDCJFA_01517 0.0 leuA_1 2.3.1.182 - E ko:K09011 ko00290,ko00660,ko01100,ko01210,ko01230,map00290,map00660,map01100,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Belongs to the alpha-IPM synthase homocitrate synthase family
PDHDCJFA_01518 7.6e-139 leuD 4.2.1.33, 4.2.1.35 - E ko:K01704 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PDHDCJFA_01519 2.51e-83 - 5.1.3.32 - G ko:K03534 - ko00000,ko01000 L-rhamnose mutarotase
PDHDCJFA_01520 5.3e-150 - - - F - - - Hydrolase of X-linked nucleoside diphosphate N terminal
PDHDCJFA_01521 1.43e-154 - - - I - - - Domain of unknown function (DUF4153)
PDHDCJFA_01522 1.57e-212 alaC - - E - - - Aminotransferase
PDHDCJFA_01523 7.04e-150 - - - K ko:K07735 - ko00000,ko03000 Uncharacterized ACR, COG1678
PDHDCJFA_01524 8.82e-124 speG 2.3.1.57 - J ko:K00657 ko00330,ko01100,ko04216,map00330,map01100,map04216 ko00000,ko00001,ko00002,ko01000 Acetyltransferase (GNAT) domain
PDHDCJFA_01525 5.1e-286 wbbL - - S ko:K07011 - ko00000 Glycosyl transferase family group 2
PDHDCJFA_01526 4.59e-60 recR - - L ko:K06187 ko03440,map03440 ko00000,ko00001,ko03400 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PDHDCJFA_01527 8.19e-134 lemA - - S ko:K03744 - ko00000 LemA family
PDHDCJFA_01528 0.0 ccp 1.11.1.5 - C ko:K00428 - ko00000,ko01000 Psort location Periplasmic, score
PDHDCJFA_01529 2.45e-109 rlpA - - M ko:K03642 - ko00000 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
PDHDCJFA_01530 1.96e-179 recQ2 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
PDHDCJFA_01531 5.66e-231 - - - S - - - Trehalose utilisation
PDHDCJFA_01532 6.91e-204 - 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
PDHDCJFA_01533 2.91e-147 - - - P ko:K07085 - ko00000 TrkA C-terminal domain protein
PDHDCJFA_01534 1.07e-146 lrgB - - M - - - TIGR00659 family
PDHDCJFA_01535 1.36e-58 - - - S ko:K06518 - ko00000,ko02000 Murein hydrolase
PDHDCJFA_01536 7.28e-289 mgtE - - P ko:K06213 - ko00000,ko02000 Acts as a magnesium transporter
PDHDCJFA_01537 5.59e-186 ksgA 2.1.1.182 - J ko:K02528 - ko00000,ko01000,ko03009 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PDHDCJFA_01541 0.0 - - - P - - - TonB-dependent Receptor Plug Domain
PDHDCJFA_01542 0.0 - - - S ko:K21572 - ko00000,ko02000 Pfam:SusD
PDHDCJFA_01543 0.0 - - - E - - - Zinc carboxypeptidase
PDHDCJFA_01544 6.17e-190 - - - M - - - Linear amide C-N hydrolases, choloylglycine hydrolase family
PDHDCJFA_01545 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
PDHDCJFA_01546 7.47e-102 - - - T - - - COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains
PDHDCJFA_01547 1.04e-203 - - - T - - - Histidine kinase-like ATPases
PDHDCJFA_01550 0.0 - - - E - - - Prolyl oligopeptidase family
PDHDCJFA_01551 2e-17 - - - - - - - -
PDHDCJFA_01553 2.14e-297 rhlE 3.6.4.13 - L ko:K11927 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Belongs to the DEAD box helicase family
PDHDCJFA_01554 7.45e-264 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDHDCJFA_01555 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDHDCJFA_01556 5.8e-59 - - - S - - - Lysine exporter LysO
PDHDCJFA_01557 3.16e-137 - - - S - - - Lysine exporter LysO
PDHDCJFA_01558 0.0 - - - - - - - -
PDHDCJFA_01559 6.93e-182 - - - Q - - - Protein of unknown function (DUF1698)
PDHDCJFA_01560 2.07e-164 queC 6.3.4.20 - F ko:K06920 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko01000,ko03016 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
PDHDCJFA_01561 1.89e-115 queF 1.7.1.13 - H ko:K09457 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko01000,ko03016 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
PDHDCJFA_01562 2.16e-200 - - - S - - - Domain of Unknown Function (DUF1080)
PDHDCJFA_01563 1.19e-84 - - - L - - - DNA metabolism protein
PDHDCJFA_01565 6.72e-19 - - - - - - - -
PDHDCJFA_01566 0.0 pepN 3.4.11.2 - E ko:K01256 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 Peptidase family M1 domain
PDHDCJFA_01567 1.2e-109 - - - S - - - Domain of unknown function (DUF4268)
PDHDCJFA_01568 8.14e-161 pheA 4.2.1.51 - E ko:K04518 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Prephenate dehydratase
PDHDCJFA_01569 6.79e-293 dapL 2.6.1.83 - E ko:K10206,ko:K14261 ko00300,ko01100,ko01110,ko01130,ko01230,map00300,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase class I and II
PDHDCJFA_01570 4.48e-257 pheB 5.4.99.5 - E ko:K04516 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Cytochrome C4
PDHDCJFA_01571 1.14e-263 holB 2.7.7.7 - L ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
PDHDCJFA_01572 8.62e-309 - - - V - - - COG0534 Na -driven multidrug efflux pump
PDHDCJFA_01573 7.6e-246 gldB - - O - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_01574 0.0 - - - P - - - TonB dependent receptor
PDHDCJFA_01575 2.72e-169 - - - H - - - Putative porin
PDHDCJFA_01576 8.69e-191 - - - M - - - Bacterial extracellular solute-binding proteins, family 3
PDHDCJFA_01577 0.0 - - - T - - - PAS fold
PDHDCJFA_01580 0.0 - - - M - - - PDZ DHR GLGF domain protein
PDHDCJFA_01581 8.64e-163 pyrH 2.7.4.22 - F ko:K09903 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphorylation of UMP to UDP
PDHDCJFA_01583 1.15e-221 ispB 2.5.1.90 - H ko:K02523 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Belongs to the FPP GGPP synthase family
PDHDCJFA_01584 3.72e-211 deoC 4.1.2.4 - F ko:K01619 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PDHDCJFA_01585 1.55e-72 ypjD - - S - - - MazG nucleotide pyrophosphohydrolase domain
PDHDCJFA_01586 0.0 - - - M - - - Fibronectin type 3 domain
PDHDCJFA_01587 0.0 - - - M - - - Glycosyl transferase family 2
PDHDCJFA_01588 5.76e-141 traM - - S - - - Conjugative transposon, TraM
PDHDCJFA_01589 5.58e-218 - - - U - - - Domain of unknown function (DUF4138)
PDHDCJFA_01590 7.91e-141 - - - S - - - Conjugative transposon protein TraO
PDHDCJFA_01591 4.02e-109 - - - S - - - Domain of unknown function, B. Theta Gene description (DUF3872)
PDHDCJFA_01592 1.28e-117 - 3.2.1.17 - S ko:K01185 - ko00000,ko01000 lysozyme
PDHDCJFA_01593 3.4e-172 - - - - - - - -
PDHDCJFA_01594 2.2e-223 - - - E - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_01595 0.0 - 3.2.1.135 GH13 G ko:K21575 - ko00000,ko01000 Belongs to the glycosyl hydrolase 13 family
PDHDCJFA_01596 0.0 - - CE10 I ko:K03929 - ko00000,ko01000 Carboxylesterase family
PDHDCJFA_01597 6.05e-53 - - - S ko:K07075 - ko00000 Nucleotidyltransferase domain
PDHDCJFA_01598 1.2e-84 - - - - - - - -
PDHDCJFA_01599 1.47e-137 - - - - - - - -
PDHDCJFA_01600 1.12e-267 bglB 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Fibronectin type III-like domain
PDHDCJFA_01601 5.58e-178 - - - S - - - protein (some members contain a von Willebrand factor type A (vWA) domain)
PDHDCJFA_01602 8.16e-209 - - - O - - - Psort location CytoplasmicMembrane, score
PDHDCJFA_01603 7.23e-217 batA - - S ko:K07114 - ko00000,ko02000 Von Willebrand factor type A domain
PDHDCJFA_01605 0.0 - - - E - - - COG COG2755 Lysophospholipase L1 and related esterases
PDHDCJFA_01606 9.19e-143 - - - S - - - Rhomboid family
PDHDCJFA_01608 0.0 - - - C - - - Domain of Unknown Function (DUF1080)
PDHDCJFA_01609 6.72e-140 - - - K - - - Bacterial regulatory proteins, tetR family
PDHDCJFA_01610 1.36e-212 - - - K - - - helix_turn_helix, arabinose operon control protein
PDHDCJFA_01611 2.18e-104 - - - S - - - Short repeat of unknown function (DUF308)
PDHDCJFA_01613 0.0 - - - P - - - TonB-dependent receptor
PDHDCJFA_01614 0.0 paaK 6.2.1.30 - H ko:K01912 ko00360,ko01120,ko05111,map00360,map01120,map05111 ko00000,ko00001,ko01000 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
PDHDCJFA_01615 9.38e-210 - - - T - - - Histidine kinase-like ATPases
PDHDCJFA_01616 0.0 - - - P ko:K16089 - ko00000,ko02000 TonB-dependent receptor
PDHDCJFA_01617 0.0 - - - C - - - Elongator protein 3, MiaB family, Radical SAM
PDHDCJFA_01621 0.0 - - - V - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDHDCJFA_01622 1.38e-68 - - - M - - - Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDHDCJFA_01623 3.38e-312 - 2.1.1.37 - H ko:K00558 ko00270,ko01100,ko05206,map00270,map01100,map05206 ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036 C-5 cytosine-specific DNA methylase
PDHDCJFA_01624 6.7e-15 - - - - - - - -
PDHDCJFA_01625 5.83e-179 - - - O - - - Peptidase, M48 family
PDHDCJFA_01626 0.0 mutS_2 - - L - - - ATPase domain of DNA mismatch repair MUTS family
PDHDCJFA_01628 0.0 - - - M - - - RHS repeat-associated core domain protein
PDHDCJFA_01629 4.26e-92 htpG - - O ko:K04079 ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418 ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147 Molecular chaperone HSP90
PDHDCJFA_01630 4.02e-69 - - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Belongs to the thioredoxin family
PDHDCJFA_01631 0.0 - - - M ko:K07001 - ko00000 esterase of the alpha-beta hydrolase superfamily
PDHDCJFA_01632 0.0 - - - M - - - Tricorn protease homolog
PDHDCJFA_01634 6.03e-128 - - - S - - - Protein of unknown function (DUF1282)
PDHDCJFA_01639 3.33e-10 per1 3.5.2.6 - V ko:K17836 ko00311,ko01130,ko01501,map00311,map01130,map01501 ko00000,ko00001,ko00002,ko01000,ko01504 Beta-lactamase enzyme family
PDHDCJFA_01640 7.28e-56 per1 3.5.2.6 - V ko:K17836 ko00311,ko01130,ko01501,map00311,map01130,map01501 ko00000,ko00001,ko00002,ko01000,ko01504 Beta-lactamase enzyme family
PDHDCJFA_01641 4.59e-173 - - - EG ko:K03299 - ko00000,ko02000 GntP family permease
PDHDCJFA_01642 6.19e-263 glxK 2.7.1.165 - G ko:K00865 ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130 ko00000,ko00001,ko01000 Belongs to the glycerate kinase type-1 family
PDHDCJFA_01643 1.34e-110 nimB - - S ko:K07005 - ko00000 Pyridoxamine 5'-phosphate oxidase
PDHDCJFA_01644 1.16e-154 ahpC 1.11.1.15 - O ko:K03386 ko04214,map04214 ko00000,ko00001,ko01000,ko04147 C-terminal domain of 1-Cys peroxiredoxin
PDHDCJFA_01645 0.0 - - - T - - - Psort location CytoplasmicMembrane, score
PDHDCJFA_01646 5.35e-163 ung 3.2.2.27 - L ko:K03648 ko03410,ko05340,map03410,map05340 ko00000,ko00001,ko01000,ko03400 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PDHDCJFA_01647 7.97e-141 - - - S - - - Uncharacterised ArCR, COG2043
PDHDCJFA_01648 3.38e-66 ogt 2.1.1.63 - L ko:K00567,ko:K07443 - ko00000,ko01000,ko03400 6-O-methylguanine DNA methyltransferase, DNA binding domain
PDHDCJFA_01649 3.41e-106 - - - S - - - Alpha beta hydrolase
PDHDCJFA_01650 2.87e-300 atpA 3.6.3.14 - C ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PDHDCJFA_01651 1.19e-199 atpG - - C ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PDHDCJFA_01652 4.39e-219 - - - EG - - - membrane
PDHDCJFA_01653 7.18e-298 - - - S - - - membrane
PDHDCJFA_01654 7.64e-104 hpt 2.4.2.8 - F ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000 Hypoxanthine phosphoribosyltransferase
PDHDCJFA_01655 1.8e-130 adk 2.7.4.3 - F ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PDHDCJFA_01656 2.85e-266 obg - - S ko:K03979 - ko00000,ko01000,ko03009 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PDHDCJFA_01657 2.7e-192 - - - S ko:K05810 - ko00000,ko01000 Belongs to the multicopper oxidase YfiH RL5 family
PDHDCJFA_01658 0.0 wbpM - - GM - - - Polysaccharide biosynthesis protein
PDHDCJFA_01660 5.46e-45 - - - - - - - -
PDHDCJFA_01661 0.0 - - - T - - - COG COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
PDHDCJFA_01662 2.76e-224 - - - L - - - COG NOG11942 non supervised orthologous group
PDHDCJFA_01663 2.46e-83 - - - G - - - Xylose isomerase-like TIM barrel
PDHDCJFA_01664 1.26e-250 radA - - O ko:K04485 - ko00000,ko03400 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PDHDCJFA_01665 0.0 - - - S ko:K07137 - ko00000 FAD-binding protein
PDHDCJFA_01666 8.99e-133 - - - I - - - Acid phosphatase homologues
PDHDCJFA_01667 2.45e-307 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
PDHDCJFA_01668 3.21e-303 - - - V ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
PDHDCJFA_01669 2.33e-50 - - - K - - - Transcriptional regulator
PDHDCJFA_01670 2.33e-283 - - - S ko:K07133 - ko00000 AAA domain
PDHDCJFA_01671 1.49e-35 - - - - - - - -
PDHDCJFA_01672 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDHDCJFA_01673 0.0 asnB 6.3.5.4 - E ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 ko00000,ko00001,ko01000,ko01002 Glutamine amidotransferase domain
PDHDCJFA_01674 1.49e-272 mtrC - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDHDCJFA_01678 0.0 argS 6.1.1.19 - J ko:K01887 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Arginyl-tRNA synthetase
PDHDCJFA_01679 4.8e-51 hupB - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PDHDCJFA_01680 0.0 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
PDHDCJFA_01681 0.0 - - - C - - - NapC/NirT cytochrome c family, N-terminal region
PDHDCJFA_01682 1.49e-184 - - - S - - - TolB-like 6-blade propeller-like
PDHDCJFA_01683 1.34e-217 - 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
PDHDCJFA_01685 5.15e-122 - - - K - - - Participates in transcription elongation, termination and antitermination
PDHDCJFA_01686 1.51e-87 - - - - - - - -
PDHDCJFA_01688 5.92e-150 - - - M - - - sugar transferase
PDHDCJFA_01689 1.61e-155 - - - S - - - Domain of unknown function (DUF4469) with IG-like fold
PDHDCJFA_01690 3.76e-123 mepM_1 - - M - - - peptidase
PDHDCJFA_01691 1.97e-125 - - - S - - - Domain of Unknown Function (DUF1599)
PDHDCJFA_01692 3.99e-315 - - - S - - - DoxX family
PDHDCJFA_01693 0.0 thrA 1.1.1.3, 2.7.2.4 - E ko:K12524 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 homoserine dehydrogenase
PDHDCJFA_01694 0.0 - - - S - - - Domain of unknown function (DUF4270)
PDHDCJFA_01695 2.95e-134 - - - I - - - COG NOG24984 non supervised orthologous group
PDHDCJFA_01696 7.41e-80 - - - I - - - COG NOG24984 non supervised orthologous group
PDHDCJFA_01697 1.21e-215 hisB 3.1.3.15, 4.2.1.19 - E ko:K01089,ko:K01693 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Histidine biosynthesis bifunctional protein HisB
PDHDCJFA_01698 1.61e-249 hisC 2.6.1.9 - E ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PDHDCJFA_01699 4.12e-293 hisD 1.1.1.23 - E ko:K00013 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PDHDCJFA_01700 2.14e-150 hisG 2.4.2.17 - F ko:K00765 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 ATP phosphoribosyltransferase
PDHDCJFA_01701 0.0 - - - F ko:K21572 - ko00000,ko02000 SusD family
PDHDCJFA_01702 0.0 - 3.1.6.1 - P ko:K01130 ko00140,ko00600,map00140,map00600 ko00000,ko00001,ko01000 Arylsulfatase
PDHDCJFA_01703 0.0 potA 3.6.3.29, 3.6.3.30, 3.6.3.31 - P ko:K02010,ko:K02017,ko:K10112,ko:K11072 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PDHDCJFA_01704 4.28e-182 - - - P ko:K11071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PDHDCJFA_01706 5.06e-194 - - - S - - - PD-(D/E)XK nuclease family transposase
PDHDCJFA_01707 0.0 - - - E ko:K01270 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 Catalyzes the hydrolysis of Xaa-His dipeptides
PDHDCJFA_01708 1.47e-182 - - - S ko:K07027 - ko00000,ko02000 Lysylphosphatidylglycerol synthase TM region
PDHDCJFA_01710 0.0 bpeF - - V ko:K03296 - ko00000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDHDCJFA_01711 2.17e-302 aspA 4.3.1.1 - E ko:K01744 ko00250,ko01100,map00250,map01100 ko00000,ko00001,ko01000 Catalyzes the formation of fumarate from aspartate
PDHDCJFA_01712 1.02e-228 - - - G - - - Xylose isomerase-like TIM barrel
PDHDCJFA_01713 1.8e-130 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PDHDCJFA_01714 1.43e-96 - - - S - - - COG NOG14473 non supervised orthologous group
PDHDCJFA_01715 4.56e-130 coaE 2.7.1.24 - H ko:K00859 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PDHDCJFA_01716 2.61e-235 - - - S - - - YbbR-like protein
PDHDCJFA_01717 3.22e-51 yajC - - U ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase subunit YajC
PDHDCJFA_01718 6.08e-118 nusB - - K ko:K03625 - ko00000,ko03009,ko03021 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PDHDCJFA_01719 0.0 - 3.4.21.50 - O ko:K01337 - ko00000,ko01000,ko01002 Trypsin-like peptidase domain
PDHDCJFA_01720 1.56e-165 - - - KT - - - LytTr DNA-binding domain
PDHDCJFA_01721 2.19e-249 - - - T - - - Histidine kinase
PDHDCJFA_01722 5.32e-261 - 3.2.1.20 GH31 M ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Glycosyl-hydrolase 97 C-terminal, oligomerisation
PDHDCJFA_01723 2.83e-144 - - - L - - - DNA-binding protein
PDHDCJFA_01726 1e-108 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PDHDCJFA_01727 0.0 relA 2.7.6.5, 3.1.7.2 - KT ko:K00951,ko:K01139 ko00230,map00230 ko00000,ko00001,ko01000,ko03009 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PDHDCJFA_01728 2.77e-186 cca 2.7.7.19, 2.7.7.72 - J ko:K00970,ko:K00974 ko03013,ko03018,map03013,map03018 ko00000,ko00001,ko01000,ko03016,ko03019 tRNA nucleotidyltransferase
PDHDCJFA_01729 0.0 dgt 3.1.5.1 - F ko:K01129 ko00230,map00230 ko00000,ko00001,ko01000 Dehydrogenase
PDHDCJFA_01730 3.01e-225 rsgA 3.1.3.100 - S ko:K06949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PDHDCJFA_01731 2.98e-123 frr - - J ko:K02838 - ko00000,ko03012 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PDHDCJFA_01732 4.2e-316 - - - S - - - Susd and RagB outer membrane lipoprotein
PDHDCJFA_01733 0.0 modF - - P ko:K05776 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ATPases associated with a variety of cellular activities
PDHDCJFA_01734 0.0 wcaJ_2 2.7.8.6 - M ko:K00996,ko:K03606 ko05111,map05111 ko00000,ko00001,ko01000,ko01005 CoA-binding domain
PDHDCJFA_01735 1.57e-281 - - - M - - - membrane
PDHDCJFA_01736 1.42e-107 - - - M - - - Gram-negative bacterial TonB protein C-terminal
PDHDCJFA_01737 6.56e-81 - - - K - - - Transcriptional regulator
PDHDCJFA_01738 0.0 - - - KMT - - - Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PDHDCJFA_01739 0.0 glpA 1.1.5.3 - C ko:K00111 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 C-terminal domain of alpha-glycerophosphate oxidase
PDHDCJFA_01740 0.0 glpK 2.7.1.30 - F ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 ko00000,ko00001,ko01000,ko04147 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PDHDCJFA_01741 1.21e-284 aspC 2.6.1.1 - E ko:K00812 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase
PDHDCJFA_01742 7.99e-294 ribBA 3.5.4.25, 4.1.99.12 - H ko:K14652 ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PDHDCJFA_01743 4.18e-140 - - - S ko:K07091 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Permease, YjgP YjgQ family
PDHDCJFA_01745 4.67e-153 - - - U ko:K03310 - ko00000 Sodium:alanine symporter family
PDHDCJFA_01746 2.93e-172 - - - P ko:K02051 - ko00000,ko00002,ko02000 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
PDHDCJFA_01747 0.0 - - - E ko:K03307 - ko00000 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PDHDCJFA_01748 2.24e-19 - - - - - - - -
PDHDCJFA_01749 1.29e-257 - - - M - - - Glycosyl transferase family group 2
PDHDCJFA_01750 2.9e-226 - - - S ko:K07011 - ko00000 Glycosyl transferase family 2
PDHDCJFA_01752 1.91e-128 - - - K ko:K13652 - ko00000,ko03000 methylphosphotriester-DNA alkyltransferase (AraC XylS family)
PDHDCJFA_01753 3.09e-212 - - - K - - - stress protein (general stress protein 26)
PDHDCJFA_01754 8.74e-193 - - - K - - - Helix-turn-helix domain
PDHDCJFA_01755 4.42e-95 - - - S - - - Predicted AAA-ATPase
PDHDCJFA_01756 0.0 - - - S - - - Peptidase family M28
PDHDCJFA_01757 5.96e-139 kdsD 5.3.1.13 - M ko:K06041 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Iron dicitrate transport regulator FecR
PDHDCJFA_01758 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDHDCJFA_01759 1.91e-232 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
PDHDCJFA_01760 1.09e-253 - - - G - - - AP endonuclease family 2 C terminus
PDHDCJFA_01761 6.26e-248 - - - S - - - Calcineurin-like phosphoesterase
PDHDCJFA_01762 0.0 - - - EU - - - Peptidase, S9A B C family, catalytic domain protein
PDHDCJFA_01763 4.44e-49 - - - Q - - - Mycolic acid cyclopropane synthetase
PDHDCJFA_01764 3.22e-152 - - - T - - - Histidine kinase
PDHDCJFA_01765 8.65e-175 - - - T ko:K02477 - ko00000,ko02022 LytTr DNA-binding domain
PDHDCJFA_01766 1.48e-85 - - - S - - - COG NOG30654 non supervised orthologous group
PDHDCJFA_01767 9.53e-164 metY 2.5.1.49 - E ko:K01740 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 O-acetylhomoserine aminocarboxypropyltransferase
PDHDCJFA_01768 0.0 - - - EGP ko:K08169 - ko00000,ko02000 Major Facilitator Superfamily
PDHDCJFA_01769 0.0 norM - - V ko:K03327 - ko00000,ko02000 Mate efflux family protein
PDHDCJFA_01770 8.96e-150 - - - P - - - TonB-dependent Receptor Plug Domain
PDHDCJFA_01771 2.8e-185 suhB 3.1.3.25 - G ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 ko00000,ko00001,ko00002,ko01000 Inositol monophosphatase family
PDHDCJFA_01772 2.92e-180 - - - T - - - Tetratricopeptide repeat protein
PDHDCJFA_01774 0.0 purF 2.4.2.14 - F ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 amidophosphoribosyltransferase
PDHDCJFA_01775 0.0 sppA - - OU ko:K04773 - ko00000,ko01000,ko01002 signal peptide peptidase SppA, 67K type
PDHDCJFA_01776 3.5e-272 lpxK 2.7.1.130 - F ko:K00912 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA)
PDHDCJFA_01777 4.42e-101 - - - E - - - Domain of Unknown Function (DUF1080)
PDHDCJFA_01778 8.35e-148 - - - E - - - Domain of Unknown Function (DUF1080)
PDHDCJFA_01779 7.86e-141 - - - G - - - Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
PDHDCJFA_01780 1.84e-132 - - - G - - - Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
PDHDCJFA_01781 0.0 yccM - - C - - - 4Fe-4S binding domain
PDHDCJFA_01782 8.09e-233 - - - S ko:K07079 - ko00000 Aldo/keto reductase family
PDHDCJFA_01783 8.61e-168 - - - V ko:K02003 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
PDHDCJFA_01784 7.15e-277 - - - V ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
PDHDCJFA_01786 0.0 - - - G - - - Glycosyl hydrolase family 92
PDHDCJFA_01788 2.44e-113 - - - - - - - -
PDHDCJFA_01789 1.04e-133 - - - S - - - VirE N-terminal domain
PDHDCJFA_01790 7.08e-145 - - - S ko:K07507 - ko00000,ko02000 MgtC family
PDHDCJFA_01791 1.01e-190 murQ 4.2.1.126 - G ko:K07106 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PDHDCJFA_01792 1.19e-177 - - - G - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_01793 1.95e-238 - - - S - - - Domain of unknown function (DUF4831)
PDHDCJFA_01794 0.0 - - - E ko:K03305 - ko00000 amino acid peptide transporter
PDHDCJFA_01795 0.0 - - - S - - - Susd and RagB outer membrane lipoprotein
PDHDCJFA_01796 1.13e-289 - - - P - - - CarboxypepD_reg-like domain
PDHDCJFA_01798 0.0 - - - MP ko:K07798 ko02020,map02020 ko00000,ko00001,ko02000 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDHDCJFA_01799 0.0 - 3.2.1.45 GH30 M ko:K01201 ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 30 family
PDHDCJFA_01800 1.8e-262 trmU 2.8.1.13 - J ko:K00566 ko04122,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PDHDCJFA_01801 5.8e-220 prs 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PDHDCJFA_01802 6.64e-85 - - - - - - - -
PDHDCJFA_01804 0.0 lysM - - M - - - Lysin motif
PDHDCJFA_01805 8.08e-162 - - - M - - - Outer membrane protein beta-barrel domain
PDHDCJFA_01806 2.29e-101 dapH - - S - - - acetyltransferase
PDHDCJFA_01807 0.0 - 3.4.11.9 - E ko:K01262 - ko00000,ko01000,ko01002 peptidase M24
PDHDCJFA_01808 1.6e-80 - - - L - - - DNA-binding protein
PDHDCJFA_01809 7.44e-190 uxuB - - IQ - - - KR domain
PDHDCJFA_01810 3.93e-292 uxuA 4.2.1.8 - G ko:K01686 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the dehydration of D-mannonate
PDHDCJFA_01811 1.96e-148 - - - G - - - Tripartite ATP-independent periplasmic transporter, DctM component
PDHDCJFA_01812 0.0 - 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Fibronectin type III-like domain
PDHDCJFA_01814 3.64e-83 - - - K - - - Penicillinase repressor
PDHDCJFA_01815 9.99e-280 - - - KT - - - BlaR1 peptidase M56
PDHDCJFA_01816 3.51e-176 - - - L - - - COG NOG11942 non supervised orthologous group
PDHDCJFA_01819 4.79e-21 trxB 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Pyridine nucleotide-disulphide oxidoreductase
PDHDCJFA_01820 5.36e-218 - - - S ko:K07139 - ko00000 radical SAM protein
PDHDCJFA_01821 3.22e-109 - - - S - - - Domain of unknown function (DUF4251)
PDHDCJFA_01822 1.35e-235 - - - E - - - Carboxylesterase family
PDHDCJFA_01823 1.07e-43 - - - - - - - -
PDHDCJFA_01826 1.32e-216 lgt - - M - - - Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PDHDCJFA_01827 5.12e-211 ddh 1.4.1.16 - E ko:K03340 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
PDHDCJFA_01828 5.61e-255 - - - S - - - Endonuclease exonuclease phosphatase family
PDHDCJFA_01829 0.0 - - - - - - - -
PDHDCJFA_01830 0.0 - - - G - - - Domain of unknown function (DUF4091)
PDHDCJFA_01831 1.75e-133 - - - S - - - Flavin reductase like domain
PDHDCJFA_01832 1.14e-119 - - - C - - - Flavodoxin
PDHDCJFA_01833 4.23e-255 yjmD_2 - - E ko:K18369 ko00640,map00640 ko00000,ko00001,ko01000 COG1063 Threonine dehydrogenase and related Zn-dependent
PDHDCJFA_01834 7.33e-115 - - - S - - - HEPN domain
PDHDCJFA_01835 5.73e-239 nadA 2.5.1.72 - H ko:K03517 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
PDHDCJFA_01836 1.22e-119 spoU - - J - - - RNA methyltransferase
PDHDCJFA_01837 7.07e-131 - - - S - - - Domain of unknown function (DUF4294)
PDHDCJFA_01838 0.0 - - - T - - - His Kinase A (phosphoacceptor) domain
PDHDCJFA_01839 1.99e-198 gloA 4.4.1.5 - E ko:K01759,ko:K03827 ko00620,map00620 ko00000,ko00001,ko01000 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PDHDCJFA_01840 0.0 sufD - - O ko:K09015 - ko00000 FeS assembly protein SufD
PDHDCJFA_01841 2.47e-163 sufC - - O ko:K09013 - ko00000,ko02000 Part of SUF system involved in inserting iron-sulfur clusters into proteins
PDHDCJFA_01842 1.78e-238 - - - S - - - Major fimbrial subunit protein (FimA)
PDHDCJFA_01843 2.15e-10 - - - S - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_01844 0.0 fhs 6.3.4.3 - F ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the formate--tetrahydrofolate ligase family
PDHDCJFA_01845 2.29e-295 proS 6.1.1.15 - J ko:K01881 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro)
PDHDCJFA_01846 8.15e-154 - - - - - - - -
PDHDCJFA_01847 1.37e-246 - - - P - - - Psort location CytoplasmicMembrane, score 10.00
PDHDCJFA_01848 0.0 nhaA - - P ko:K03313 - ko00000,ko02000 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
PDHDCJFA_01849 1.89e-27 - - - S - - - Transglycosylase associated protein
PDHDCJFA_01850 0.0 - - - S - - - Glycosyl hydrolase-like 10
PDHDCJFA_01853 5.94e-71 - - - M - - - Chaperone of endosialidase
PDHDCJFA_01854 1.32e-44 - - - F ko:K21572 - ko00000,ko02000 SusD family
PDHDCJFA_01855 8.12e-174 - - - G - - - Xylose isomerase-like TIM barrel
PDHDCJFA_01856 5.91e-38 - - - KT - - - PspC domain protein
PDHDCJFA_01857 1.14e-112 uvrB - - L ko:K03702 ko03420,map03420 ko00000,ko00001,ko03400 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PDHDCJFA_01858 1.74e-291 uvrB - - L ko:K03702 ko03420,map03420 ko00000,ko00001,ko03400 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PDHDCJFA_01859 2.6e-110 - - - I - - - Protein of unknown function (DUF1460)
PDHDCJFA_01860 4.02e-136 - - - - - - - -
PDHDCJFA_01862 1.7e-303 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDHDCJFA_01863 0.0 - - - Q ko:K21572 - ko00000,ko02000 pyridine nucleotide-disulphide oxidoreductase
PDHDCJFA_01864 1.71e-270 - - - V - - - Multidrug transporter MatE
PDHDCJFA_01865 0.0 - - - P ko:K21572 - ko00000,ko02000 SusD family
PDHDCJFA_01866 3.64e-219 waaM 2.3.1.241 - M ko:K02517 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Lipid A Biosynthesis
PDHDCJFA_01867 0.0 yqeV 2.8.4.5 - J ko:K18707 - ko00000,ko01000,ko03016 Fe-S oxidoreductase
PDHDCJFA_01868 0.0 - - - L - - - AAA domain
PDHDCJFA_01869 2.13e-188 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
PDHDCJFA_01870 1.71e-306 cdr - - P - - - Belongs to the sulfur carrier protein TusA family
PDHDCJFA_01871 1.59e-305 serS 6.1.1.11 - J ko:K01875 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 seryl-tRNA synthetase
PDHDCJFA_01873 7.94e-220 corA - - P ko:K03284 - ko00000,ko02000 Transporter
PDHDCJFA_01874 2.95e-78 - - - G - - - Glycosyl hydrolase family 92
PDHDCJFA_01875 1.88e-249 - - - V ko:K03543 - ko00000,ko00002,ko02000 Barrel-sandwich domain of CusB or HlyD membrane-fusion
PDHDCJFA_01876 1.92e-300 - - - MU - - - Outer membrane efflux protein
PDHDCJFA_01877 4.94e-86 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
PDHDCJFA_01878 6.61e-220 hutI 3.5.2.7 - Q ko:K01468 ko00340,ko01100,map00340,map01100 ko00000,ko00001,ko00002,ko01000 Imidazolone-5-propionate hydrolase
PDHDCJFA_01879 2.13e-135 fchA - - E - - - Methenyltetrahydrofolate cyclohydrolase
PDHDCJFA_01880 1.14e-299 hutH 4.3.1.3 - E ko:K01745 ko00340,ko01100,map00340,map01100 ko00000,ko00001,ko00002,ko01000 Histidine ammonia-lyase
PDHDCJFA_01881 7.11e-122 - - - S - - - COG0790 FOG TPR repeat, SEL1 subfamily
PDHDCJFA_01882 0.0 - - - S - - - Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
PDHDCJFA_01883 0.0 - - - G - - - Glycosyl hydrolase family 92
PDHDCJFA_01884 2.97e-54 - - - K ko:K03088 - ko00000,ko03021 DNA-templated transcription, initiation
PDHDCJFA_01885 8.75e-109 - - - S - - - Calcium/calmodulin dependent protein kinase II association domain
PDHDCJFA_01886 3.91e-212 - - - K - - - helix_turn_helix, arabinose operon control protein
PDHDCJFA_01887 9.27e-294 - - - P ko:K07214 - ko00000 Putative esterase
PDHDCJFA_01888 0.0 - - - S - - - OstA-like protein
PDHDCJFA_01889 5.31e-310 surA 5.2.1.8 - M ko:K03771 - ko00000,ko01000,ko03110 peptidylprolyl isomerase
PDHDCJFA_01890 5.18e-116 - 3.1.1.85 - S ko:K09789 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko00002,ko01000 Protein of unknown function (DUF452)
PDHDCJFA_01891 1.64e-181 bioC 2.1.1.197 - H ko:K02169 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko00002,ko01000 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway
PDHDCJFA_01892 4.3e-158 bioD 6.3.3.3 - H ko:K01935 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
PDHDCJFA_01893 6.58e-88 - - - S - - - Protein of unknown function (DUF1232)
PDHDCJFA_01894 0.0 - - - S - - - Phage late control gene D protein (GPD)
PDHDCJFA_01895 2.86e-93 - - - S ko:K06903 - ko00000 Gene 25-like lysozyme
PDHDCJFA_01896 2.12e-98 - - - T - - - His Kinase A (phosphoacceptor) domain
PDHDCJFA_01897 7.68e-253 galE 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family
PDHDCJFA_01898 4.19e-120 rnfA - - C ko:K03617 - ko00000 Part of a membrane complex involved in electron transport
PDHDCJFA_01899 6.43e-126 rnfE - - C ko:K03613 - ko00000 Part of a membrane complex involved in electron transport
PDHDCJFA_01901 0.0 mrcA 2.4.1.129, 3.4.16.4 GT51 M ko:K05366 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 Penicillin-binding Protein
PDHDCJFA_01902 1.43e-199 nylB - - V - - - Beta-lactamase
PDHDCJFA_01903 2.93e-286 - - - Q - - - Carbohydrate family 9 binding domain-like
PDHDCJFA_01904 4.26e-13 - - - - - - - -
PDHDCJFA_01905 4.38e-207 - - - I - - - Psort location CytoplasmicMembrane, score 10.00
PDHDCJFA_01906 3.72e-54 - - - I - - - Psort location CytoplasmicMembrane, score 10.00
PDHDCJFA_01907 0.0 - 3.4.14.4 - S ko:K01277 - ko00000,ko01000,ko01002 Peptidase family M49
PDHDCJFA_01908 1.69e-162 - - - L - - - DNA alkylation repair enzyme
PDHDCJFA_01909 3.31e-108 fur - - P ko:K03711 - ko00000,ko03000 Belongs to the Fur family
PDHDCJFA_01910 6.9e-281 - - - CO - - - amine dehydrogenase activity
PDHDCJFA_01911 3.55e-187 - - - M - - - Glycosyltransferase like family 2
PDHDCJFA_01912 4.29e-88 - - - - - - - -
PDHDCJFA_01913 2.84e-263 mraY2 - - M - - - UDP-N-acetylmuramyl pentapeptide phosphotransferase
PDHDCJFA_01914 4.68e-136 - - - S - - - Domain of unknown function (DUF4469) with IG-like fold
PDHDCJFA_01916 0.0 - - - M - - - Nucleotidyl transferase
PDHDCJFA_01917 4.47e-47 - - - C ko:K07138 - ko00000 Domain of unknown function (DUF362)
PDHDCJFA_01918 0.0 mnmE - - S ko:K03650 - ko00000,ko01000,ko03016 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PDHDCJFA_01919 7.07e-167 - - - L - - - DNA binding domain, excisionase family
PDHDCJFA_01920 0.0 recJ - - L ko:K07462 ko03410,ko03430,ko03440,map03410,map03430,map03440 ko00000,ko00001,ko01000,ko03400 single-stranded-DNA-specific exonuclease RecJ
PDHDCJFA_01922 4.73e-242 asd 1.2.1.11 - E ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PDHDCJFA_01923 1.06e-283 - - - - - - - -
PDHDCJFA_01924 0.0 - - - NU - - - Tetratricopeptide repeat
PDHDCJFA_01925 2.34e-203 - - - S - - - Domain of unknown function (DUF4292)
PDHDCJFA_01926 4.99e-186 serA 1.1.1.399, 1.1.1.95 - CH ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDHDCJFA_01927 2.31e-217 serC 2.6.1.52 - E ko:K00831 ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PDHDCJFA_01928 0.0 ilvD 4.2.1.9 - EG ko:K01687 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the IlvD Edd family
PDHDCJFA_01929 7.17e-258 - - - J - - - endoribonuclease L-PSP
PDHDCJFA_01930 0.0 - - - C - - - cytochrome c peroxidase
PDHDCJFA_01931 8.14e-124 - - - S - - - Domain of unknown function (DUF4468) with TBP-like fold
PDHDCJFA_01932 1.78e-263 - - - S - - - Endonuclease Exonuclease phosphatase family protein
PDHDCJFA_01933 5.68e-199 - - - S - - - Rhomboid family
PDHDCJFA_01934 1.61e-74 - 3.4.21.105 - S ko:K09650 - ko00000,ko01000,ko01002,ko03029 membrane
PDHDCJFA_01935 5.55e-137 - - - S - - - Uncharacterized ACR, COG1399
PDHDCJFA_01936 1.73e-40 rpmF - - J ko:K02911 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bL32 family
PDHDCJFA_01937 1.67e-250 fabH 2.3.1.180 - I ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PDHDCJFA_01938 4.38e-209 era - - S ko:K03595 - ko00000,ko03009,ko03029 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PDHDCJFA_01940 8.08e-302 - - - S - - - Radical SAM superfamily
PDHDCJFA_01941 2.01e-310 - - - CG - - - glycosyl
PDHDCJFA_01942 0.0 - - - S - - - PepSY domain protein
PDHDCJFA_01943 2.96e-255 - - - P ko:K02014 - ko00000,ko02000 TonB dependent receptor
PDHDCJFA_01944 7.05e-216 bglA - - G - - - Glycoside Hydrolase
PDHDCJFA_01945 2.09e-83 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2141)
PDHDCJFA_01946 0.0 - - - H - - - Outer membrane protein beta-barrel family
PDHDCJFA_01949 7.63e-112 - - - S - - - 6-bladed beta-propeller
PDHDCJFA_01950 8.14e-164 - - - S - - - 6-bladed beta-propeller
PDHDCJFA_01953 8.28e-157 - - - S - - - 6-bladed beta-propeller
PDHDCJFA_01954 1.59e-252 gdh 1.4.1.4 - E ko:K00262 ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100 ko00000,ko00001,ko01000 Belongs to the Glu Leu Phe Val dehydrogenases family
PDHDCJFA_01955 1.74e-130 ruvC 3.1.22.4 - L ko:K01159 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
PDHDCJFA_01956 2.75e-70 - - - S - - - Domain of unknown function (DUF4286)
PDHDCJFA_01958 0.0 amyS 3.2.1.1 GH13 G ko:K01176 ko00500,ko01100,ko04973,map00500,map01100,map04973 ko00000,ko00001,ko01000 Alpha-amylase domain
PDHDCJFA_01959 0.0 - 1.2.5.3, 1.3.99.16 - C ko:K03518,ko:K07302,ko:K18930 - ko00000,ko01000 2 iron, 2 sulfur cluster binding
PDHDCJFA_01960 2.78e-291 - - - H - - - PD-(D/E)XK nuclease superfamily
PDHDCJFA_01961 8.31e-158 - - - - - - - -
PDHDCJFA_01962 2.81e-36 lepB 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
PDHDCJFA_01963 4.37e-206 lepB_1 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
PDHDCJFA_01964 4.2e-152 - - - C - - - WbqC-like protein
PDHDCJFA_01965 4.73e-266 phnW 2.6.1.37 - E ko:K03430 ko00440,ko01100,ko01120,map00440,map01100,map01120 ko00000,ko00001,ko01000,ko01007 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily
PDHDCJFA_01966 6.89e-209 yrbG - - P ko:K07301 - ko00000,ko02000 K -dependent Na Ca exchanger
PDHDCJFA_01967 0.0 relA 2.7.6.5 - KT ko:K00951 ko00230,map00230 ko00000,ko00001,ko01000 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PDHDCJFA_01968 1.4e-36 - - - T - - - Tetratricopeptide repeat protein
PDHDCJFA_01969 5.18e-291 - - - S - - - Domain of unknown function (DUF4934)
PDHDCJFA_01970 1.28e-83 - - - - - - - -
PDHDCJFA_01972 7.49e-195 ispE 2.7.1.148 - F ko:K00919 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PDHDCJFA_01973 1.58e-176 rnc 3.1.26.3 - J ko:K03685 ko03008,ko05205,map03008,map05205 ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PDHDCJFA_01974 9.45e-68 dps - - P ko:K04047 - ko00000,ko03036 Belongs to the Dps family
PDHDCJFA_01975 4.32e-163 - - - S - - - Outer membrane protein beta-barrel domain
PDHDCJFA_01976 8.27e-111 dps - - P ko:K04047 - ko00000,ko03036 Belongs to the Dps family
PDHDCJFA_01977 8.69e-183 - - - K ko:K13641,ko:K19333 - ko00000,ko03000 helix_turn_helix isocitrate lyase regulation
PDHDCJFA_01979 1.41e-135 rpoE - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PDHDCJFA_01980 0.0 - - - I - - - Outer membrane protein transport protein, Ompp1 FadL TodX
PDHDCJFA_01981 2.38e-264 - 3.4.13.19 - E ko:K01273 - ko00000,ko00537,ko01000,ko01002,ko04147 Membrane dipeptidase (Peptidase family M19)
PDHDCJFA_01982 0.0 - - - T - - - Histidine kinase-like ATPases
PDHDCJFA_01983 1.08e-27 - - - - - - - -
PDHDCJFA_01984 2.69e-82 - - - S - - - Putative prokaryotic signal transducing protein
PDHDCJFA_01985 1.22e-270 dxr 1.1.1.267 - I ko:K00099 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
PDHDCJFA_01986 1.3e-130 nlpD_1 - - M - - - Peptidase family M23
PDHDCJFA_01987 1.86e-126 - 3.1.3.10, 3.1.3.104 - S ko:K07025,ko:K20866,ko:K21063 ko00010,ko00740,ko01100,ko01110,ko01120,map00010,map00740,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000 HAD hydrolase, family IA, variant 3
PDHDCJFA_01988 1.25e-55 - - - S - - - Protein of unknown function (DUF1015)
PDHDCJFA_01989 0.0 - - - T - - - Psort location CytoplasmicMembrane, score
PDHDCJFA_01990 5.58e-125 - 2.7.1.4 - G ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 ko00000,ko00001,ko01000 pfkB family carbohydrate kinase
PDHDCJFA_01991 4.43e-250 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
PDHDCJFA_01993 1.16e-199 nlpD_2 - - M - - - Peptidase family M23
PDHDCJFA_01994 7.21e-62 - - - K - - - addiction module antidote protein HigA
PDHDCJFA_01995 1.08e-223 - - - L - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_01996 7.76e-81 - - - S - - - Bacterial mobilisation protein (MobC)
PDHDCJFA_01997 1.4e-203 - - - U - - - Relaxase mobilization nuclease domain protein
PDHDCJFA_01998 1.04e-72 nuoF 1.12.1.3, 1.6.5.3 - C ko:K00335,ko:K18331 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
PDHDCJFA_01999 0.0 hndD 1.12.1.3, 1.17.1.9 - C ko:K00123,ko:K18332 ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200 ko00000,ko00001,ko01000 Iron hydrogenase small subunit
PDHDCJFA_02000 1.32e-116 hndA 1.12.1.3 - C ko:K18330 - ko00000,ko01000 Thioredoxin-like [2Fe-2S] ferredoxin
PDHDCJFA_02002 2.17e-74 - - - J ko:K03113 ko03013,map03013 ko00000,ko00001,ko03012 Translation initiation factor
PDHDCJFA_02004 8.99e-133 rfbC 5.1.3.13 - M ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PDHDCJFA_02005 1.77e-286 rfbB 4.2.1.46 - M ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PDHDCJFA_02006 1.23e-133 - - - M - - - AsmA-like C-terminal region
PDHDCJFA_02007 2.7e-161 - - - V ko:K01992 - ko00000,ko00002,ko02000 ABC-2 type transporter
PDHDCJFA_02008 1.83e-282 gntT - - EG ko:K06155 - ko00000,ko02000 GntP family permease
PDHDCJFA_02009 2.52e-124 - - - I - - - Domain of unknown function (DUF4833)
PDHDCJFA_02010 2.67e-181 uppP 3.6.1.27 - V ko:K06153 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PDHDCJFA_02011 7.33e-50 fjo13 - - S - - - Protein of unknown function (DUF3098)
PDHDCJFA_02012 3.72e-185 ftsX - - D ko:K09811 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03036 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily
PDHDCJFA_02013 1.43e-80 - - - S - - - PIN domain
PDHDCJFA_02016 0.0 - - - O - - - ATPase family associated with various cellular activities (AAA)
PDHDCJFA_02017 3.1e-113 - - - S - - - positive regulation of growth rate
PDHDCJFA_02018 1.91e-123 - - - S ko:K08999 - ko00000 Bifunctional nuclease
PDHDCJFA_02019 1.59e-303 nupC - - F ko:K03317 - ko00000 Na+ dependent nucleoside transporter C-terminus
PDHDCJFA_02020 1.29e-171 rsmE 2.1.1.193 - J ko:K09761 - ko00000,ko01000,ko03009 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PDHDCJFA_02023 1.34e-118 - - - M ko:K06142 - ko00000 Outer membrane protein (OmpH-like)
PDHDCJFA_02024 4.02e-69 - - - S - - - Psort location CytoplasmicMembrane, score
PDHDCJFA_02025 4.85e-65 - - - D - - - Septum formation initiator
PDHDCJFA_02027 3.17e-168 - - - M ko:K01991 ko02026,map02026 ko00000,ko00001,ko02000 Polysaccharide biosynthesis/export protein
PDHDCJFA_02028 3.31e-97 - - - G - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_02029 3.34e-92 - - - - - - - -
PDHDCJFA_02030 7.83e-154 - - - K - - - Participates in transcription elongation, termination and antitermination
PDHDCJFA_02031 0.0 - - - V ko:K06147 - ko00000,ko02000 hmm pf03412
PDHDCJFA_02032 0.0 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
PDHDCJFA_02033 1.54e-189 - - - G - - - Domain of Unknown Function (DUF1080)
PDHDCJFA_02034 8.97e-73 - 1.8.5.2 - S ko:K16937 ko00920,ko01120,map00920,map01120 ko00000,ko00001,ko01000 DoxX
PDHDCJFA_02035 0.0 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
PDHDCJFA_02036 2.4e-240 - - - M ko:K02005 - ko00000 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDHDCJFA_02037 1.19e-296 - - - MU ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 Outer membrane efflux protein
PDHDCJFA_02038 4.49e-217 - - - I - - - alpha/beta hydrolase fold
PDHDCJFA_02040 0.0 dtpD - - E - - - POT family
PDHDCJFA_02041 2.34e-70 - - - S - - - PFAM Uncharacterised BCR, COG1649
PDHDCJFA_02042 0.0 - - - H - - - TonB-dependent Receptor Plug Domain
PDHDCJFA_02043 1.36e-141 - - - V ko:K02004 - ko00000,ko00002,ko02000 Efflux ABC transporter, permease protein
PDHDCJFA_02044 7.44e-257 - 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolases, choloylglycine hydrolase family
PDHDCJFA_02045 0.0 - - - P - - - Outer membrane protein beta-barrel family
PDHDCJFA_02046 3.24e-148 - - - KT - - - Transcriptional regulatory protein, C terminal
PDHDCJFA_02047 2.48e-57 ykfA - - S - - - Pfam:RRM_6
PDHDCJFA_02049 9.95e-100 - - - - - - - -
PDHDCJFA_02050 1.15e-299 - - - U - - - Relaxase mobilization nuclease domain protein
PDHDCJFA_02051 2.96e-214 - - - S - - - Fimbrillin-like
PDHDCJFA_02052 1.55e-96 - - - S - - - Domain of unknown function (DUF4252)
PDHDCJFA_02053 3.31e-114 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PDHDCJFA_02054 8.3e-82 - - - - - - - -
PDHDCJFA_02055 0.0 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
PDHDCJFA_02056 1.7e-265 - - - H - - - NAD metabolism ATPase kinase
PDHDCJFA_02057 0.0 ptk_3 - - DM - - - Chain length determinant protein
PDHDCJFA_02058 4.3e-150 - - - S - - - CBS domain
PDHDCJFA_02059 1.24e-172 pdxJ 2.6.99.2 - H ko:K03474 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
PDHDCJFA_02060 1.32e-157 exbB - - U ko:K03561 - ko00000,ko02000 Transporter, MotA TolQ ExbB proton channel family protein
PDHDCJFA_02063 1.63e-137 - - - M - - - Outer membrane protein beta-barrel domain
PDHDCJFA_02064 8.81e-205 - 2.7.1.33 - H ko:K09680 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Pantothenate kinase
PDHDCJFA_02065 1.49e-75 mutB 5.4.99.2 - I ko:K01847 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Methylmalonyl-CoA mutase
PDHDCJFA_02066 1.13e-173 mutA 5.4.99.2 - I ko:K01847 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Methylmalonyl-CoA mutase
PDHDCJFA_02067 2.1e-214 mutA 5.4.99.2 - I ko:K01847 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Methylmalonyl-CoA mutase
PDHDCJFA_02069 2.02e-168 - - - M - - - Glycosyltransferase, group 2 family protein
PDHDCJFA_02070 4.75e-32 - - - S - - - Predicted AAA-ATPase
PDHDCJFA_02071 3.94e-112 - - - S - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_02072 1.76e-268 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
PDHDCJFA_02073 0.0 poxB 1.2.5.1, 2.2.1.6 - EH ko:K00156,ko:K01652 ko00290,ko00620,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Thiamine pyrophosphate enzyme, central domain
PDHDCJFA_02074 2.99e-255 - - - P - - - Domain of unknown function (DUF4976)
PDHDCJFA_02075 2.1e-270 - - - G - - - Glycosyl hydrolase
PDHDCJFA_02076 8.5e-91 paaI - - Q ko:K02614 ko00360,map00360 ko00000,ko00001,ko01000 Thioesterase superfamily
PDHDCJFA_02077 0.0 cysS 6.1.1.16 - J ko:K01883 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
PDHDCJFA_02078 9.56e-72 - - - V ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
PDHDCJFA_02079 1.56e-189 - - - IQ - - - Enoyl-(Acyl carrier protein) reductase
PDHDCJFA_02080 8.22e-120 - - - J ko:K03827 - ko00000,ko01000 Acetyltransferase, gnat family
PDHDCJFA_02081 1.41e-109 - - - J - - - Acetyltransferase (GNAT) domain
PDHDCJFA_02083 3.04e-307 - - - M - - - Surface antigen
PDHDCJFA_02084 2.21e-83 cbiD 2.1.1.195 - H ko:K02188 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko01000 Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
PDHDCJFA_02085 0.0 - 3.4.15.5 - E ko:K01284 - ko00000,ko01000,ko01002 Peptidase family M3
PDHDCJFA_02086 1.53e-114 - - - S - - - Domain of unknown function (DUF4251)
PDHDCJFA_02087 5.87e-311 - - - V - - - Multidrug transporter MatE
PDHDCJFA_02088 1.24e-40 - 3.6.3.34 - HP ko:K02013 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding protein
PDHDCJFA_02089 1.32e-237 gyrB 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDHDCJFA_02090 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
PDHDCJFA_02092 2.76e-219 fabK 1.3.1.9 - S ko:K02371 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 2-nitropropane dioxygenase
PDHDCJFA_02093 7.98e-261 - - - MU - - - Outer membrane efflux protein
PDHDCJFA_02094 0.0 - - - S - - - NPCBM/NEW2 domain
PDHDCJFA_02095 0.0 - 3.2.1.40 - G ko:K05989 - ko00000,ko01000 Bacterial alpha-L-rhamnosidase C-terminal domain
PDHDCJFA_02096 0.0 - - - P ko:K16089 - ko00000,ko02000 TonB-dependent receptor
PDHDCJFA_02097 9.99e-270 - 4.99.1.3 - H ko:K02190 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko01000 Cobalt chelatase (CbiK)
PDHDCJFA_02098 3.61e-266 trpB 4.2.1.20, 5.3.1.24 - E ko:K01696,ko:K01817 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PDHDCJFA_02099 2.26e-24 - - - - - - - -
PDHDCJFA_02100 2.2e-259 clpC - - O ko:K03696 ko01100,map01100 ko00000,ko03110 Belongs to the ClpA ClpB family
PDHDCJFA_02105 9.83e-36 - - - S ko:K19158 - ko00000,ko01000,ko02048 YoeB-like toxin of bacterial type II toxin-antitoxin system
PDHDCJFA_02106 4.07e-25 - - - - - - - -
PDHDCJFA_02107 1.34e-151 - - - E - - - GDSL-like Lipase/Acylhydrolase
PDHDCJFA_02108 0.0 ppiD 5.2.1.8 - O ko:K01802,ko:K03770 - ko00000,ko01000,ko03110 peptidylprolyl isomerase
PDHDCJFA_02109 4.2e-241 - - - S ko:K22230 ko00562,ko01120,map00562,map01120 ko00000,ko00001,ko01000 Oxidoreductase NAD-binding domain protein
PDHDCJFA_02110 3.95e-273 - - - S - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_02112 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
PDHDCJFA_02113 3.69e-217 aglC 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 Melibiase
PDHDCJFA_02114 2.09e-257 - - - S - - - Protein of unknown function (DUF3810)
PDHDCJFA_02115 5.04e-109 - - - S - - - Peptidase M15
PDHDCJFA_02117 1.52e-155 rsmG 2.1.1.170 - J ko:K03501 - ko00000,ko01000,ko03009,ko03036 Specifically methylates the N7 position of a guanine in 16S rRNA
PDHDCJFA_02118 3.32e-204 - - - S - - - Protein of unknown function (DUF3298)
PDHDCJFA_02119 0.0 - - - G - - - COG NOG27066 non supervised orthologous group
PDHDCJFA_02120 6.66e-175 - - - M - - - Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
PDHDCJFA_02121 0.0 - - - E - - - Domain of unknown function (DUF4374)
PDHDCJFA_02122 2.42e-198 - - - S ko:K07017 - ko00000 Putative esterase
PDHDCJFA_02123 1.05e-278 - - - S - - - Domain of unknown function (DUF4105)
PDHDCJFA_02125 2.75e-238 asnA 6.3.1.1 - E ko:K01914 ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230 ko00000,ko00001,ko01000 aspartate--ammonia ligase
PDHDCJFA_02127 2.03e-274 - 5.1.3.14 - G ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 ko00000,ko00001,ko00002,ko01000,ko01005 UDP-N-acetylglucosamine 2-epimerase
PDHDCJFA_02128 2.49e-97 - 1.1.1.336 - M ko:K02472 ko00520,ko05111,map00520,map05111 ko00000,ko00001,ko01000 Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PDHDCJFA_02129 9.49e-102 - - - P - - - TonB dependent receptor
PDHDCJFA_02131 0.0 - - - E - - - Transglutaminase-like superfamily
PDHDCJFA_02133 9.88e-128 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PDHDCJFA_02134 6.51e-67 - - - S - - - Domain of unknown function (DUF5107)
PDHDCJFA_02135 1.01e-106 - - - M - - - Peptidase family M23
PDHDCJFA_02136 0.0 pgcA 5.4.2.2 - G ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoglucomutase
PDHDCJFA_02137 6.12e-159 - - - T - - - LytTr DNA-binding domain
PDHDCJFA_02138 4.91e-230 - - - T - - - Histidine kinase
PDHDCJFA_02139 9.15e-313 ligA 6.5.1.2 - L ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 ko00000,ko00001,ko01000,ko03032,ko03400 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PDHDCJFA_02140 4.7e-120 - - - - - - - -
PDHDCJFA_02141 3.86e-155 gadB 4.1.1.15, 4.1.2.27 - E ko:K01580,ko:K01634 ko00250,ko00410,ko00430,ko00600,ko00650,ko01100,ko01110,ko01120,ko02024,ko04071,ko04727,ko04940,map00250,map00410,map00430,map00600,map00650,map01100,map01110,map01120,map02024,map04071,map04727,map04940 ko00000,ko00001,ko00002,ko01000 Belongs to the group II decarboxylase family
PDHDCJFA_02142 9.39e-230 glsA 3.5.1.2 - E ko:K01425 ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230 ko00000,ko00001,ko01000 Belongs to the glutaminase family
PDHDCJFA_02143 7.01e-124 mltD_2 - - M - - - Transglycosylase SLT domain
PDHDCJFA_02145 5.43e-228 - 1.1.1.26 - CH ko:K00015 ko00630,ko01100,ko01110,ko01120,map00630,map01100,map01110,map01120 ko00000,ko00001,ko01000 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDHDCJFA_02146 5.61e-170 - - - L - - - DNA alkylation repair
PDHDCJFA_02147 0.0 zwf 1.1.1.363, 1.1.1.49 - G ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PDHDCJFA_02148 8.56e-164 pgl 3.1.1.31 - G ko:K01057 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 6-phosphogluconolactonase
PDHDCJFA_02149 5.8e-309 - - - V ko:K02004 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score
PDHDCJFA_02150 1e-213 - - - V ko:K02004 - ko00000,ko00002,ko02000 COG0577 ABC-type antimicrobial peptide transport system permease component
PDHDCJFA_02151 1.02e-128 atsB - - C ko:K06871 - ko00000 oxidizes both cysteine and serine residues to C-alpha-formylglycine in sulfatase enzyme protein substrates
PDHDCJFA_02152 0.0 tldD1 - - S ko:K03568 - ko00000,ko01002 Putative modulator of DNA gyrase
PDHDCJFA_02153 0.0 - - - M - - - O-Antigen ligase
PDHDCJFA_02155 4.07e-107 - - - S ko:K03558 - ko00000 Colicin V production protein
PDHDCJFA_02156 5.28e-80 infB - - J ko:K02519 - ko00000,ko03012,ko03029 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PDHDCJFA_02157 5.54e-149 - - - K - - - Transcriptional regulator
PDHDCJFA_02158 4.15e-258 - - - S ko:K06889 - ko00000 COG COG1073 Hydrolases of the alpha beta superfamily
PDHDCJFA_02159 0.0 - 3.4.15.5 - E ko:K01284 - ko00000,ko01000,ko01002 Peptidase family M3
PDHDCJFA_02160 1.02e-179 glpF - - U ko:K02440 - ko00000,ko02000 Major intrinsic protein
PDHDCJFA_02161 7.7e-110 - - - C ko:K03605 - ko00000,ko01000,ko01002 Hydrogenase maturation protease
PDHDCJFA_02162 3.28e-176 - - - C ko:K03620 ko02020,map02020 ko00000,ko00001 Domain of unknown function (DUF4405)
PDHDCJFA_02163 2.71e-94 - 1.12.99.6 - C ko:K06281 ko00633,ko01120,map00633,map01120 ko00000,ko00001,ko01000 Nickel-dependent hydrogenase
PDHDCJFA_02164 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDHDCJFA_02165 1.27e-249 - 4.1.1.81 - E ko:K04720 ko00860,map00860 ko00000,ko00001,ko01000 Aminotransferase
PDHDCJFA_02166 1.02e-06 - - - - - - - -
PDHDCJFA_02167 2.2e-222 - 4.99.1.3 - H ko:K02190 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko01000 CbiX
PDHDCJFA_02168 0.0 - - - P ko:K16089 - ko00000,ko02000 TonB dependent receptor
PDHDCJFA_02169 6.31e-253 ilvE 2.6.1.42 - EH ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Branched-chain amino acid aminotransferase
PDHDCJFA_02170 0.0 miaB 2.8.4.3 - J ko:K06168 - ko00000,ko01000,ko03016 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PDHDCJFA_02172 6.2e-49 - - - S - - - PD-(D/E)XK nuclease family transposase
PDHDCJFA_02173 1.37e-140 - - - S - - - Protein of unknown function (DUF3109)
PDHDCJFA_02174 1.15e-315 gpmI 5.4.2.12 - G ko:K15633 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PDHDCJFA_02175 0.0 - - - K - - - Transcriptional regulator
PDHDCJFA_02176 5.37e-82 - - - K - - - Transcriptional regulator
PDHDCJFA_02177 0.0 prtQ - - O ko:K08303 ko05120,map05120 ko00000,ko00001,ko01000,ko01002 Collagenase
PDHDCJFA_02180 7.26e-120 - - - L - - - VirE N-terminal domain protein
PDHDCJFA_02181 5.19e-97 - - - U ko:K03559 - ko00000,ko02000 Biopolymer transporter ExbD
PDHDCJFA_02182 2.26e-136 - - - U - - - Biopolymer transporter ExbD
PDHDCJFA_02183 7.69e-100 - - - S - - - Psort location CytoplasmicMembrane, score
PDHDCJFA_02184 2.71e-157 exbB - - U ko:K03561 - ko00000,ko02000 MotA TolQ ExbB proton channel family protein
PDHDCJFA_02185 3.1e-57 trmB 2.1.1.33 - J ko:K03439 - ko00000,ko01000,ko03016 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PDHDCJFA_02186 8.47e-264 mrp - - D ko:K03593 - ko00000,ko03029,ko03036 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
PDHDCJFA_02187 2.79e-180 - - - S - - - Acyltransferase family
PDHDCJFA_02188 1.31e-36 - - - S - - - COG NOG17973 non supervised orthologous group
PDHDCJFA_02189 8.55e-188 - - - C - - - 4Fe-4S dicluster domain
PDHDCJFA_02190 5.49e-208 - - - S - - - GGGtGRT protein
PDHDCJFA_02191 1.41e-136 yigZ - - S - - - YigZ family
PDHDCJFA_02192 1.07e-37 - - - - - - - -
PDHDCJFA_02193 0.0 uvrA2 - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PDHDCJFA_02194 0.0 - - - G - - - F5 8 type C domain
PDHDCJFA_02195 1.67e-252 oorB 1.2.7.11, 1.2.7.3 - C ko:K00175 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 ferredoxin oxidoreductase subunit beta
PDHDCJFA_02196 1.31e-220 porA 1.2.7.11, 1.2.7.3 - C ko:K00174 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 2-oxoacid acceptor oxidoreductase, alpha subunit
PDHDCJFA_02197 0.0 typA - - T ko:K06207 - ko00000 GTP-binding protein TypA
PDHDCJFA_02198 4.82e-55 rpsO - - J ko:K02956 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PDHDCJFA_02199 8.33e-122 atpH - - C ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDHDCJFA_02200 6.52e-64 atpF - - C ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PDHDCJFA_02201 4.08e-29 atpE - - C ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDHDCJFA_02202 9.18e-158 atpB - - C ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko03110 it plays a direct role in the translocation of protons across the membrane
PDHDCJFA_02203 2.97e-87 phoA 3.1.3.1 - P ko:K01077 ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020 ko00000,ko00001,ko00002,ko00537,ko01000,ko04147 Alkaline phosphatase homologues
PDHDCJFA_02204 0.0 pfp 2.7.1.11, 2.7.1.90 - H ko:K00895,ko:K21071 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions
PDHDCJFA_02205 0.0 yaeT - - M ko:K07277 - ko00000,ko02000,ko03029 membrane
PDHDCJFA_02206 5.24e-66 - - - - - - - -
PDHDCJFA_02207 0.0 covS - - T - - - HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PDHDCJFA_02208 0.0 - - - T - - - PAS domain
PDHDCJFA_02210 5.03e-197 - - - S ko:K06907 - ko00000 Phage tail sheath C-terminal domain
PDHDCJFA_02212 2.19e-220 pyrD 1.3.1.14, 1.3.98.1 - F ko:K00226,ko:K17828 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PDHDCJFA_02213 2.33e-193 pyrK - - C ko:K02823 ko00240,ko01100,map00240,map01100 ko00000,ko00001 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(
PDHDCJFA_02214 4.26e-96 - - - K - - - Helix-turn-helix XRE-family like proteins
PDHDCJFA_02215 3.16e-144 - - - S - - - Nucleotidyl transferase AbiEii toxin, Type IV TA system
PDHDCJFA_02216 3.49e-161 gltD 1.18.1.2, 1.19.1.1 - C ko:K00528 - ko00000,ko01000 Ferredoxin-NADP reductase
PDHDCJFA_02217 0.0 gltA 1.3.1.1, 1.4.1.13, 1.4.1.14 - E ko:K00266,ko:K17722 ko00240,ko00250,ko00410,ko00770,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00240,map00250,map00410,map00770,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation
PDHDCJFA_02218 1.96e-43 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDHDCJFA_02219 0.0 nadB 1.4.3.16 - H ko:K00278 ko00250,ko00760,ko01100,map00250,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of L-aspartate to iminoaspartate
PDHDCJFA_02220 5.89e-194 - - - - - - - -
PDHDCJFA_02221 2.75e-08 - - - - - - - -
PDHDCJFA_02223 3.46e-241 gpr - - C ko:K19265 - ko00000,ko01000 Aldo/keto reductase family
PDHDCJFA_02224 2.97e-303 - - - P - - - Sulfatase
PDHDCJFA_02225 1.23e-204 - - - S - - - Alpha/beta hydrolase family
PDHDCJFA_02226 3e-220 - - - M - - - nucleotidyltransferase
PDHDCJFA_02228 2.69e-311 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PDHDCJFA_02229 1.9e-189 phnX 3.11.1.1 - S ko:K05306 ko00440,ko01100,ko01120,map00440,map01100,map01120 ko00000,ko00001,ko01000 Belongs to the HAD-like hydrolase superfamily. PhnX family
PDHDCJFA_02230 5.23e-161 sdhC - - S ko:K00241 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002 fumarate reductase
PDHDCJFA_02231 0.0 - 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Glycosyl-hydrolase 97 N-terminal
PDHDCJFA_02232 7.57e-287 - - - E ko:K03294 - ko00000 C-terminus of AA_permease
PDHDCJFA_02233 1.11e-84 - - - S - - - GtrA-like protein
PDHDCJFA_02234 3.04e-57 ycnE - - S - - - Antibiotic biosynthesis monooxygenase
PDHDCJFA_02235 0.0 czcA - - P ko:K15726 - ko00000,ko02000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDHDCJFA_02237 4.62e-188 rpsB - - J ko:K02967 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS2 family
PDHDCJFA_02238 1.13e-225 tsf - - J ko:K02357 - ko00000,ko03012,ko03029 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PDHDCJFA_02239 3.33e-151 - - - P - - - Ion channel
PDHDCJFA_02241 8.57e-84 - 6.4.1.1 - I ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Biotin-requiring enzyme
PDHDCJFA_02242 4.27e-67 accC 6.3.4.14, 6.4.1.2, 6.4.1.3 - I ko:K01961,ko:K01965 ko00061,ko00280,ko00620,ko00630,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Biotin carboxylase
PDHDCJFA_02243 2.03e-112 nhaS3 - - P - - - Transporter, CPA2 family
PDHDCJFA_02244 1.17e-137 - - - C - - - Nitroreductase family
PDHDCJFA_02245 3.8e-213 sbcC - - L ko:K03546 - ko00000,ko03400 Putative exonuclease SbcCD, C subunit
PDHDCJFA_02246 1.79e-61 - - - - - - - -
PDHDCJFA_02247 8.21e-271 - - - L - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_02249 1.05e-241 argD 2.6.1.11, 2.6.1.17 - E ko:K00821 ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PDHDCJFA_02250 4.92e-142 soxS - - CO ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 cell redox homeostasis
PDHDCJFA_02251 4.07e-113 - - - T - - - Cyclic nucleotide-binding domain
PDHDCJFA_02252 8.74e-314 - - - V - - - MatE
PDHDCJFA_02253 1.44e-316 - - - S - - - Tetratricopeptide repeat
PDHDCJFA_02254 0.0 pbpC 2.4.1.129 GT51 M ko:K05367 ko00550,map00550 ko00000,ko00001,ko01000,ko01003,ko01011 Penicillin-Binding Protein C-terminus Family
PDHDCJFA_02255 1.82e-20 amyS 3.2.1.1 GH13 G ko:K01176 ko00500,ko01100,ko04973,map00500,map01100,map04973 ko00000,ko00001,ko01000 Alpha-amylase domain
PDHDCJFA_02256 0.0 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
PDHDCJFA_02257 1.12e-116 - 1.16.3.1 - S ko:K03594 ko00860,map00860 ko00000,ko00001,ko01000 Ferritin-like domain
PDHDCJFA_02258 0.0 - - - M - - - Psort location CytoplasmicMembrane, score 10.00
PDHDCJFA_02260 0.0 nnrD 4.2.1.136, 5.1.99.6 - H ko:K17758,ko:K17759 - ko00000,ko01000 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PDHDCJFA_02261 1.09e-313 glyA 2.1.2.1 - E ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PDHDCJFA_02262 1.16e-162 - - - C - - - Domain of Unknown Function (DUF1080)
PDHDCJFA_02264 5.63e-102 rpiB 5.3.1.6 - G ko:K01808 ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Ribose 5-phosphate isomerase
PDHDCJFA_02265 0.0 - 4.1.1.3, 6.4.1.1 - C ko:K01571,ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko02000 Conserved carboxylase domain
PDHDCJFA_02269 2e-256 - - - S - - - Acyltransferase family
PDHDCJFA_02270 6.39e-198 mreC - - M ko:K03570 - ko00000,ko03036 shape-determining protein MreC
PDHDCJFA_02271 1.35e-238 mreB - - D ko:K03569 - ko00000,ko02048,ko03036,ko04812 Rod shape-determining protein MreB
PDHDCJFA_02272 2.07e-123 kdsC 3.1.3.45 - S ko:K03270 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
PDHDCJFA_02273 3.67e-178 - - - S - - - Domain of unknown function (DUF2520)
PDHDCJFA_02274 3.12e-127 - - - C - - - nitroreductase
PDHDCJFA_02275 6.86e-292 - - - GM - - - Polysaccharide biosynthesis protein
PDHDCJFA_02276 6.12e-16 ptk_3 - - DM - - - Chain length determinant protein
PDHDCJFA_02277 0.0 ptk_3 - - DM - - - Chain length determinant protein
PDHDCJFA_02279 9.87e-262 ychF - - J ko:K06942 - ko00000,ko03009 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PDHDCJFA_02280 0.0 fusA2 - - J ko:K02355 - ko00000,ko03012,ko03029 elongation factor G
PDHDCJFA_02281 0.0 dnaK - - O ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Heat shock 70 kDa protein
PDHDCJFA_02282 1.05e-232 - - - M - - - glycosyl transferase family 2
PDHDCJFA_02283 2.09e-91 nadK 2.7.1.23 - H ko:K00858 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PDHDCJFA_02284 3.14e-188 panB 2.1.2.11 - H ko:K00606 ko00770,ko01100,ko01110,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate
PDHDCJFA_02285 2.97e-95 cspG - - K - - - 'Cold-shock' DNA-binding domain
PDHDCJFA_02286 1.54e-125 rpoE - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PDHDCJFA_02288 3.09e-121 - - - - - - - -
PDHDCJFA_02289 1.16e-65 - - - S - - - 6-bladed beta-propeller
PDHDCJFA_02290 1.24e-233 metAA 2.3.1.46 - E ko:K00651 ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PDHDCJFA_02291 6.92e-188 dnaQ 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III subunit epsilon
PDHDCJFA_02292 2.42e-261 dnaN 2.7.7.7 - L ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PDHDCJFA_02293 0.0 - - - K ko:K21572 - ko00000,ko02000 Pfam:SusD
PDHDCJFA_02294 2.83e-105 - - - I - - - CDP-alcohol phosphatidyltransferase
PDHDCJFA_02295 1.29e-175 - 3.1.3.102, 3.1.3.104 - S ko:K07025,ko:K20862 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Haloacid dehalogenase-like hydrolase
PDHDCJFA_02297 4.36e-107 - - - S - - - Pfam Oxidoreductase family, NAD-binding Rossmann fold
PDHDCJFA_02298 3.3e-197 - - - G - - - Domain of Unknown Function (DUF1080)
PDHDCJFA_02299 2.5e-173 - 3.5.99.6 - G ko:K02080,ko:K02564 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko01000 COG0363 6-phosphogluconolactonase Glucosamine-6-phosphate isomerase deaminase
PDHDCJFA_02300 0.0 rlmL - - L ko:K07444 - ko00000,ko01000 Belongs to the methyltransferase superfamily
PDHDCJFA_02301 1.33e-101 - 6.4.1.1 - I ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Biotin carboxyl carrier protein
PDHDCJFA_02305 1.9e-25 - 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 hydrolase, family 3
PDHDCJFA_02306 2.08e-122 - - - F - - - Cytidylate kinase-like family
PDHDCJFA_02307 2.57e-199 pepO 3.4.24.71 - O ko:K01415,ko:K07386 - ko00000,ko01000,ko01002,ko04147 Peptidase family M13
PDHDCJFA_02309 1.64e-113 - - - S ko:K07017 - ko00000 Putative esterase
PDHDCJFA_02310 1.9e-229 - 2.7.1.2 - G ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 glucokinase
PDHDCJFA_02311 1.6e-63 - - - T - - - His Kinase A (phosphoacceptor) domain
PDHDCJFA_02312 1.68e-178 - - - T ko:K02477 - ko00000,ko02022 LytTr DNA-binding domain
PDHDCJFA_02313 4.72e-198 - - - T - - - Histidine kinase
PDHDCJFA_02315 9.82e-238 - - - S - - - Belongs to the UPF0324 family
PDHDCJFA_02316 0.0 pheT 6.1.1.20 - J ko:K01890 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PDHDCJFA_02317 2.19e-164 - - - K - - - transcriptional regulatory protein
PDHDCJFA_02318 0.0 polA 2.7.7.7 - L ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 ko00000,ko00001,ko01000,ko03032,ko03400 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PDHDCJFA_02319 2.75e-289 - - - S - - - InterPro IPR018631 IPR012547
PDHDCJFA_02320 9.79e-181 yfbT - - S - - - HAD hydrolase, family IA, variant 3
PDHDCJFA_02321 2.11e-220 - - - G - - - Xylose isomerase-like TIM barrel
PDHDCJFA_02322 3.2e-146 - - - T - - - PglZ domain
PDHDCJFA_02323 4.39e-256 - 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolases, choloylglycine hydrolase family
PDHDCJFA_02324 0.0 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
PDHDCJFA_02325 0.0 dnaA - - L ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PDHDCJFA_02326 0.0 - - - S ko:K09704 - ko00000 DUF1237
PDHDCJFA_02327 1.36e-58 rpoD - - K ko:K03086 - ko00000,ko03021 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PDHDCJFA_02328 1.4e-170 - - - K - - - helix_turn_helix, arabinose operon control protein
PDHDCJFA_02329 2.24e-203 comM - - O ko:K07391 - ko00000 magnesium chelatase
PDHDCJFA_02330 2.38e-62 gloA 4.4.1.5 - E ko:K01759,ko:K03827 ko00620,map00620 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PDHDCJFA_02331 1.41e-104 - - - S - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_02332 2.34e-248 - - - K - - - helix_turn_helix gluconate operon transcriptional repressor
PDHDCJFA_02333 6.66e-156 - - - EK ko:K00375,ko:K05825 ko00300,ko01100,ko01130,ko01210,map00300,map01100,map01130,map01210 ko00000,ko00001,ko01000,ko03000 Alanine-glyoxylate amino-transferase
PDHDCJFA_02334 1.34e-92 - - - S ko:K07133 - ko00000 AAA domain
PDHDCJFA_02336 1.44e-190 - - - L - - - COG3666 Transposase and inactivated derivatives
PDHDCJFA_02337 8.11e-254 fumC 4.2.1.2 - C ko:K01679 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211 ko00000,ko00001,ko00002,ko01000 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PDHDCJFA_02338 0.0 - - - P - - - Domain of unknown function (DUF4976)
PDHDCJFA_02339 6.82e-208 lytG - - MNU - - - N-acetylmuramoyl-L-alanine amidase
PDHDCJFA_02340 6.16e-260 - - - CO - - - Domain of unknown function (DUF4369)
PDHDCJFA_02341 2.51e-69 pckA 4.1.1.49 - H ko:K01610 ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
PDHDCJFA_02342 3.14e-189 cbiO - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PDHDCJFA_02344 1.26e-79 - - - K - - - Transcriptional regulator
PDHDCJFA_02345 0.0 - - - H - - - Susd and RagB outer membrane lipoprotein
PDHDCJFA_02346 1.26e-247 apbE 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PDHDCJFA_02347 2.44e-109 - 4.2.1.82, 4.2.1.9 - EG ko:K01687,ko:K22396 ko00040,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00040,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the IlvD Edd family
PDHDCJFA_02349 1.1e-163 - - - JM - - - Nucleotidyl transferase
PDHDCJFA_02350 3.17e-186 lipB 3.1.4.55 - S ko:K06167 ko00440,map00440 ko00000,ko00001,ko01000 Metallo-beta-lactamase superfamily
PDHDCJFA_02351 2.17e-243 murB 1.3.1.98 - M ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation
PDHDCJFA_02352 0.0 - 5.99.1.2 - L ko:K03169 - ko00000,ko01000,ko03032 DNA topoisomerase
PDHDCJFA_02354 2.35e-39 valS 6.1.1.9 - J ko:K01873 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PDHDCJFA_02355 1.13e-217 rluD 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RluA family
PDHDCJFA_02356 0.0 - - - S - - - Lamin Tail Domain
PDHDCJFA_02357 2.66e-246 - - - L - - - Domain of unknown function (DUF1848)
PDHDCJFA_02358 2.01e-256 - - - S - - - Putative carbohydrate metabolism domain
PDHDCJFA_02359 3.57e-192 - - - S - - - Outer membrane protein beta-barrel domain
PDHDCJFA_02360 5.92e-155 secY - - U ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PDHDCJFA_02361 1.64e-193 map 3.4.11.18 - E ko:K01265 - ko00000,ko01000,ko01002 Methionine aminopeptidase
PDHDCJFA_02362 1.4e-44 infA - - J ko:K02518 - ko00000,ko03012 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PDHDCJFA_02364 9.4e-117 - - - S - - - Protein of unknown function (DUF4199)
PDHDCJFA_02365 8.07e-233 - - - M - - - Glycosyltransferase like family 2
PDHDCJFA_02367 0.0 - - - M - - - Peptidase family C69
PDHDCJFA_02368 1.68e-249 - - - S - - - Peptidase family M28
PDHDCJFA_02370 1.5e-67 cah 4.2.1.1 - P ko:K01673 ko00910,map00910 ko00000,ko00001,ko01000 Reversible hydration of carbon dioxide
PDHDCJFA_02372 1.83e-21 - - - - - - - -
PDHDCJFA_02373 0.0 scpC 2.8.3.18, 3.1.2.1 - C ko:K01067,ko:K18118 ko00020,ko00620,ko00650,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00650,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 acetyl-CoA hydrolase
PDHDCJFA_02374 9.78e-107 lrp - - K ko:K03719,ko:K05800 - ko00000,ko03000,ko03036 helix_turn_helix ASNC type
PDHDCJFA_02375 4.15e-54 - - - G - - - Glycosyl hydrolase family 20, catalytic domain
PDHDCJFA_02376 6.31e-134 - - - S - - - Hexapeptide repeat of succinyl-transferase
PDHDCJFA_02377 2.2e-222 - - - K - - - Transcriptional regulator
PDHDCJFA_02378 1.17e-61 - - - K ko:K07729 - ko00000,ko03000 Helix-turn-helix XRE-family like proteins
PDHDCJFA_02379 3.85e-181 - - - S - - - MvaI/BcnI restriction endonuclease family
PDHDCJFA_02380 4.47e-65 - - - S - - - Putative carbohydrate metabolism domain
PDHDCJFA_02382 7.44e-183 - - - S - - - non supervised orthologous group
PDHDCJFA_02383 1.78e-60 kdpC 3.6.3.12 - P ko:K01548 ko02020,map02020 ko00000,ko00001,ko01000 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
PDHDCJFA_02384 5.05e-184 yibP - - D - - - peptidase
PDHDCJFA_02385 2.1e-212 - - - S - - - PHP domain protein
PDHDCJFA_02386 2.14e-233 ltd - - GM - - - NAD dependent epimerase dehydratase family
PDHDCJFA_02387 9.58e-84 - - - G - - - Glycosyl hydrolases family 43
PDHDCJFA_02388 1.02e-55 - - - O - - - Tetratricopeptide repeat
PDHDCJFA_02390 0.0 - - - G - - - Glycosyl hydrolase family 92
PDHDCJFA_02391 7.8e-149 - - - K - - - Putative DNA-binding domain
PDHDCJFA_02392 4.48e-243 - - - O ko:K07403 - ko00000 serine protease
PDHDCJFA_02393 0.0 - - - P - - - Carboxypeptidase regulatory-like domain
PDHDCJFA_02394 1.03e-72 - 3.5.1.28 - M ko:K01448 ko01503,map01503 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 N-acetylmuramoyl-L-alanine amidase
PDHDCJFA_02395 6.84e-156 srrA - - T ko:K07657,ko:K07658 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PDHDCJFA_02397 4.8e-119 mntP - - P - - - Probably functions as a manganese efflux pump
PDHDCJFA_02398 2.79e-150 prtC - - O ko:K08303 ko05120,map05120 ko00000,ko00001,ko01000,ko01002 collagenase
PDHDCJFA_02399 3.27e-62 prtC - - O ko:K08303 ko05120,map05120 ko00000,ko00001,ko01000,ko01002 collagenase
PDHDCJFA_02400 4.88e-236 dus - - J - - - Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PDHDCJFA_02402 4.54e-201 ald 1.4.1.1 - E ko:K00259 ko00250,ko00430,ko01100,map00250,map00430,map01100 ko00000,ko00001,ko01000 Alanine dehydrogenase/PNT, N-terminal domain
PDHDCJFA_02403 1.55e-46 - - - O ko:K07397 - ko00000 OsmC-like protein
PDHDCJFA_02405 6.09e-70 - - - I - - - Biotin-requiring enzyme
PDHDCJFA_02406 0.0 - - - I - - - COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
PDHDCJFA_02407 4.84e-170 dapB 1.17.1.8 - E ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the DapB family
PDHDCJFA_02409 1.12e-245 - - - GM ko:K21572 - ko00000,ko02000 SusD family
PDHDCJFA_02410 1.53e-36 lspA 3.4.23.36 - MU ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PDHDCJFA_02411 1.41e-178 - - - S - - - Domain of unknown function (DUF4296)
PDHDCJFA_02413 1.84e-144 aviRb - - J ko:K03437 - ko00000,ko03016 RNA methyltransferase
PDHDCJFA_02414 2.66e-120 ilvN 2.2.1.6 - E ko:K01653 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 synthase small subunit
PDHDCJFA_02415 1.52e-138 ilvB 2.2.1.6 - H ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Acetolactate synthase, large subunit
PDHDCJFA_02416 1.65e-100 - - - S - - - COG NOG06390 non supervised orthologous group
PDHDCJFA_02417 3.6e-276 - 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Papain family cysteine protease
PDHDCJFA_02418 4.39e-75 trpD 2.4.2.18, 4.1.3.27 - E ko:K00766,ko:K13497 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PDHDCJFA_02419 4.43e-179 trpC 4.1.1.48 - E ko:K01609 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the TrpC family
PDHDCJFA_02421 2.49e-278 - - - T - - - Histidine kinase-like ATPases
PDHDCJFA_02422 3.86e-258 xyl3A_3 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Glycosyl hydrolase family 3
PDHDCJFA_02423 6.05e-110 - - - - - - - -
PDHDCJFA_02424 7.05e-290 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PDHDCJFA_02425 3.18e-134 pta 2.3.1.8 - C ko:K00625,ko:K13788 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Phosphotransacetylase
PDHDCJFA_02426 0.0 - 3.2.1.24 GH38 G ko:K01191 ko00511,map00511 ko00000,ko00001,ko01000,ko04131 Alpha mannosidase middle domain
PDHDCJFA_02428 5.55e-142 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PDHDCJFA_02429 7.53e-73 - - - S - - - Domain of unknown function (DUF4907)
PDHDCJFA_02430 5.1e-70 nanM - - S - - - Kelch repeat type 1-containing protein
PDHDCJFA_02431 5.66e-286 gluP - - G ko:K02429 - ko00000,ko02000 Major Facilitator
PDHDCJFA_02432 0.0 - - - S - - - COG NOG28036 non supervised orthologous group
PDHDCJFA_02433 7.16e-174 yfkO - - C - - - nitroreductase
PDHDCJFA_02435 3.11e-217 miaA 2.5.1.75 - F ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 ko00000,ko00001,ko01000,ko01006,ko03016 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PDHDCJFA_02436 7.36e-128 - - - S - - - Plasmid pRiA4b ORF-3-like protein
PDHDCJFA_02438 2.34e-164 - - - S - - - aldo keto reductase family
PDHDCJFA_02439 5.1e-165 tatC - - U ko:K03118 ko03060,ko03070,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PDHDCJFA_02440 1.7e-197 - - - S - - - Protein of unknown function (DUF3822)
PDHDCJFA_02441 1.29e-147 - - - S - - - COG NOG19144 non supervised orthologous group
PDHDCJFA_02442 4.51e-96 - - - O ko:K04655 - ko00000 AIR synthase related protein, N-terminal domain
PDHDCJFA_02443 2.83e-127 - 1.12.99.6 - C ko:K06282 ko00633,ko01120,map00633,map01120 ko00000,ko00001,ko01000 NiFe/NiFeSe hydrogenase small subunit C-terminal
PDHDCJFA_02444 4.88e-26 - 1.12.99.6 - C ko:K06282 ko00633,ko01120,map00633,map01120 ko00000,ko00001,ko01000 NiFe/NiFeSe hydrogenase small subunit C-terminal
PDHDCJFA_02446 0.0 thrC 4.2.3.1 - E ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Threonine synthase N terminus
PDHDCJFA_02447 4.9e-171 - - - C - - - Domain of Unknown Function (DUF1080)
PDHDCJFA_02448 1.05e-177 argB 2.7.2.8 - E ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the acetylglutamate kinase family. ArgB subfamily
PDHDCJFA_02449 1.02e-34 rpmC - - J ko:K02904 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uL29 family
PDHDCJFA_02450 5.2e-45 rpsQ - - J ko:K02961 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PDHDCJFA_02451 1.13e-77 rplN - - J ko:K02874 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PDHDCJFA_02452 7.55e-69 rplX - - J ko:K02895 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PDHDCJFA_02453 1.83e-106 - - - MP - - - NlpE N-terminal domain
PDHDCJFA_02454 7.74e-288 pepC 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 aminopeptidase
PDHDCJFA_02455 2.58e-253 ribD 1.1.1.193, 3.5.4.26 - H ko:K11752 ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024 ko00000,ko00001,ko00002,ko01000 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PDHDCJFA_02456 4.29e-228 - - - G - - - pfkB family carbohydrate kinase
PDHDCJFA_02459 2.55e-106 tonB2 - - M ko:K03832 - ko00000,ko02000 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PDHDCJFA_02460 1.33e-226 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29 - H ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the FPP GGPP synthase family
PDHDCJFA_02462 4.92e-155 - - - S - - - Cell wall-active antibiotics response 4TMS YvqF
PDHDCJFA_02463 5.62e-182 - - - KT - - - LytTr DNA-binding domain
PDHDCJFA_02464 8.84e-54 - - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Thioredoxin
PDHDCJFA_02465 0.0 - - - S - - - AbgT putative transporter family
PDHDCJFA_02466 1.92e-133 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PDHDCJFA_02467 8.75e-152 - - - KT - - - In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PDHDCJFA_02470 0.0 cls - - I ko:K06131 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PDHDCJFA_02471 1.01e-223 - - - L - - - COG NOG11942 non supervised orthologous group
PDHDCJFA_02472 1.26e-112 - - - S - - - Phage tail protein
PDHDCJFA_02473 1.95e-178 loiP - - O ko:K07387 - ko00000,ko01000,ko01002 Peptidase family M48
PDHDCJFA_02475 1.43e-44 dapA 4.3.3.7 - E ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PDHDCJFA_02476 0.0 cpdB 3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45 - F ko:K01119,ko:K11751 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the 5'-nucleotidase family
PDHDCJFA_02477 1.44e-254 nrnA 3.1.13.3, 3.1.3.7 - S ko:K06881 ko00920,ko01100,ko01120,map00920,map01100,map01120 ko00000,ko00001,ko01000,ko03400 domain protein
PDHDCJFA_02478 2.32e-91 - - - S - - - Protein of unknown function (DUF2975)
PDHDCJFA_02479 1.72e-39 - - - K ko:K07727 - ko00000,ko03000 Cro/C1-type HTH DNA-binding domain
PDHDCJFA_02480 5.27e-67 - - - S - - - Protein of unknown function (DUF1622)
PDHDCJFA_02482 1.13e-100 - - - M - - - Outer membrane protein beta-barrel domain
PDHDCJFA_02484 1.06e-99 ybeY - - S - - - Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PDHDCJFA_02485 1.05e-119 spmA - - S ko:K06373 - ko00000 membrane
PDHDCJFA_02486 3.74e-185 - - - E - - - GDSL-like Lipase/Acylhydrolase family
PDHDCJFA_02487 5e-111 ftnA 1.16.3.2 - P ko:K02217 - ko00000,ko01000 Iron-storage protein
PDHDCJFA_02488 4.96e-45 hsp20 - - O ko:K13993 ko04141,map04141 ko00000,ko00001,ko03110 Belongs to the small heat shock protein (HSP20) family
PDHDCJFA_02492 5.05e-243 - - - S - - - COG NOG32009 non supervised orthologous group
PDHDCJFA_02493 2.64e-259 - - - S - - - Major fimbrial subunit protein type IV, Fimbrillin, C-terminal
PDHDCJFA_02494 0.0 - - - M - - - Domain of unknown function, B. Theta Gene description (DUF3868)
PDHDCJFA_02495 2.02e-148 - - - M - - - Protein of unknown function (DUF3575)
PDHDCJFA_02497 2.09e-244 - - - S - - - Protein of unknown function (DUF4621)
PDHDCJFA_02498 3.35e-110 - - - - - - - -
PDHDCJFA_02499 0.0 - 1.8.1.8 - CO ko:K04084 - ko00000,ko01000,ko03110 Thiol disulfide interchange protein
PDHDCJFA_02500 9.87e-100 - - - S - - - Domain of unknown function (DUF4493)
PDHDCJFA_02501 4.31e-143 - - - NU - - - Tfp pilus assembly protein FimV
PDHDCJFA_02502 1.94e-220 - - - S - - - Putative carbohydrate metabolism domain
PDHDCJFA_02506 0.0 metG 6.1.1.10 - J ko:K01874 ko00450,ko00970,map00450,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PDHDCJFA_02507 2.4e-256 degT - - E - - - Belongs to the DegT DnrJ EryC1 family
PDHDCJFA_02508 3.37e-253 - 1.1.1.335 - S ko:K13016 ko00520,map00520 ko00000,ko00001,ko01000,ko01005 Oxidoreductase, NAD-binding domain protein
PDHDCJFA_02509 3.25e-53 - - - L - - - DNA-binding protein
PDHDCJFA_02510 0.0 - - - NU - - - Tetratricopeptide repeat protein
PDHDCJFA_02511 2.44e-94 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PDHDCJFA_02512 1.55e-167 - - - PT - - - Domain of unknown function (DUF4974)
PDHDCJFA_02514 1.87e-45 - - - S - - - Domain of unknown function (DUF4906)
PDHDCJFA_02515 4.91e-113 - - - L - - - Phage integrase SAM-like domain
PDHDCJFA_02516 0.0 groL - - O ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PDHDCJFA_02518 1.62e-119 rimN 2.7.7.87 - J ko:K07566 - ko00000,ko01000,ko03009,ko03016 Belongs to the SUA5 family
PDHDCJFA_02519 3.75e-206 - - - C - - - FAD dependent oxidoreductase
PDHDCJFA_02520 0.0 - - - U - - - WD40-like Beta Propeller Repeat
PDHDCJFA_02521 1.76e-153 - - - S - - - LysM domain
PDHDCJFA_02523 1.93e-116 - - - S - - - PFAM T4-like virus tail tube protein gp19
PDHDCJFA_02524 3.67e-76 - - - S - - - T4-like virus tail tube protein gp19
PDHDCJFA_02525 7.09e-139 - - - S - - - membrane
PDHDCJFA_02526 7.31e-224 - - - S ko:K07263 - ko00000,ko01000,ko01002 Belongs to the peptidase M16 family
PDHDCJFA_02527 0.0 - - - S ko:K07263 - ko00000,ko01000,ko01002 Belongs to the peptidase M16 family
PDHDCJFA_02528 1.47e-74 - - - V - - - Polysaccharide biosynthesis C-terminal domain
PDHDCJFA_02530 5.12e-71 - - - S - - - MerR HTH family regulatory protein
PDHDCJFA_02531 1e-124 dnaJ2 - - O ko:K03686,ko:K05516 - ko00000,ko03029,ko03036,ko03110 DnaJ molecular chaperone homology domain
PDHDCJFA_02532 3.08e-78 - - - - - - - -
PDHDCJFA_02533 6.83e-15 - - - - - - - -
PDHDCJFA_02534 8.7e-159 - - - M - - - sugar transferase
PDHDCJFA_02535 9.64e-34 - 3.5.1.28 - V ko:K01447 - ko00000,ko01000 N-acetylmuramoyl-L-alanine amidase
PDHDCJFA_02536 5.23e-84 - - - L - - - DNA-binding protein
PDHDCJFA_02537 2.92e-112 cobU 2.7.1.156, 2.7.7.62 - H ko:K02231 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 cobinamide kinase
PDHDCJFA_02538 1.14e-254 cobT 2.4.2.21 - F ko:K00768 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB)
PDHDCJFA_02539 2.59e-240 - - - Q - - - Clostripain family
PDHDCJFA_02543 1.03e-236 bioB 2.8.1.6 - H ko:K01012 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
PDHDCJFA_02544 1.65e-102 nlpE - - MP - - - NlpE N-terminal domain
PDHDCJFA_02546 2.93e-205 fabZ 3.5.1.108, 4.2.1.59 - IM ko:K16363 ko00061,ko00540,ko01100,ko01212,map00061,map00540,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004,ko01005 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis
PDHDCJFA_02547 4.16e-125 lpxA 2.3.1.129 - M ko:K00677 ko00540,ko01100,ko01503,map00540,map01100,map01503 ko00000,ko00001,ko00002,ko01000,ko01005 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PDHDCJFA_02548 9.42e-82 - - - S - - - PD-(D/E)XK nuclease family transposase
PDHDCJFA_02549 6.62e-22 - - - S - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_02550 9.13e-203 - - - - - - - -
PDHDCJFA_02552 0.0 - - - G - - - Domain of Unknown Function (DUF1080)
PDHDCJFA_02553 2.21e-223 ispG 1.17.7.1, 1.17.7.3 - I ko:K03526 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
PDHDCJFA_02559 9.58e-220 bfmBB 2.3.1.61 - C ko:K00658 ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
PDHDCJFA_02560 1.57e-195 - - - K - - - Helix-turn-helix domain
PDHDCJFA_02561 4.07e-133 ykgB - - S - - - membrane
PDHDCJFA_02562 6.16e-192 pyrC 3.5.2.3 - F ko:K01465 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides
PDHDCJFA_02563 3.28e-133 queE 4.3.99.3 - H ko:K10026 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko01000,ko03016 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
PDHDCJFA_02564 9.56e-72 queD 4.1.2.50, 4.2.3.12 - H ko:K01737 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000,ko03016 6-pyruvoyl tetrahydropterin synthase
PDHDCJFA_02565 1.18e-131 - - - S - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_02566 0.0 - - - S - - - C-terminal domain of CHU protein family
PDHDCJFA_02567 0.0 - - - S - - - Alpha-2-macroglobulin family
PDHDCJFA_02568 4.06e-43 - - - T - - - Domain of unknown function (DUF5074)
PDHDCJFA_02570 8.37e-195 - - - S - - - ATPase domain predominantly from Archaea
PDHDCJFA_02572 4.69e-186 rmlA 2.7.7.24 - H ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PDHDCJFA_02573 0.0 - - - M - - - Dipeptidase
PDHDCJFA_02575 4.36e-218 - 3.1.6.1 - P ko:K01130 ko00140,ko00600,map00140,map00600 ko00000,ko00001,ko01000 Arylsulfatase
PDHDCJFA_02576 8.5e-131 amn 3.2.2.4 - F ko:K01241 ko00230,map00230 ko00000,ko00001,ko01000 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile
PDHDCJFA_02577 2.94e-238 holA 2.7.7.7 - L ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
PDHDCJFA_02578 1.67e-48 - - - E - - - non supervised orthologous group
PDHDCJFA_02579 1.84e-18 - - - PT - - - Domain of unknown function (DUF4974)
PDHDCJFA_02580 3.29e-179 - - - PT - - - Domain of unknown function (DUF4974)
PDHDCJFA_02581 6.51e-192 - - - S - - - PD-(D/E)XK nuclease family transposase
PDHDCJFA_02582 6.02e-228 ccs1 - - O - - - ResB-like family
PDHDCJFA_02583 3.18e-202 nrfA 1.7.2.2 - C ko:K03385 ko00910,ko01120,ko05132,map00910,map01120,map05132 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
PDHDCJFA_02584 9.55e-190 piuB - - S - - - PepSY-associated TM region
PDHDCJFA_02585 7.87e-92 - - - C ko:K03839 - ko00000 Low-potential electron donor to a number of redox enzymes
PDHDCJFA_02586 4.37e-41 mutL - - L ko:K03572 ko03430,map03430 ko00000,ko00001,ko03400 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PDHDCJFA_02587 5.6e-171 - - - - - - - -
PDHDCJFA_02590 2.92e-153 clpP 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PDHDCJFA_02591 1.06e-155 tig - - O ko:K03545 - ko00000 Trigger factor
PDHDCJFA_02592 0.0 cydA 1.10.3.14 - C ko:K00425 ko00190,ko01100,ko02020,map00190,map01100,map02020 ko00000,ko00001,ko00002,ko01000 oxidase, subunit
PDHDCJFA_02593 3e-218 - - - M ko:K07071 - ko00000 Domain of unknown function (DUF1731)
PDHDCJFA_02594 7.35e-55 - - - K - - - Helix-turn-helix domain
PDHDCJFA_02595 1e-225 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
PDHDCJFA_02596 5.79e-62 rplW - - J ko:K02892 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PDHDCJFA_02597 1.28e-137 rplD - - J ko:K02926 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the polypeptide exit tunnel
PDHDCJFA_02598 2.73e-146 rplC - - J ko:K02906 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PDHDCJFA_02599 5.83e-176 pldA 3.1.1.32, 3.1.1.4 - M ko:K01058 ko00564,ko00565,ko00590,ko00591,ko00592,ko01100,ko01110,map00564,map00565,map00590,map00591,map00592,map01100,map01110 ko00000,ko00001,ko01000 Phospholipase A1
PDHDCJFA_02600 3.7e-245 dnaJ - - O ko:K03686 - ko00000,ko03029,ko03110 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PDHDCJFA_02601 5.57e-55 grpE - - O ko:K03687 - ko00000,ko03029,ko03110 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PDHDCJFA_02604 6.68e-98 - - - N ko:K02557 ko02030,ko02040,map02030,map02040 ko00000,ko00001,ko02000,ko02035 OmpA family
PDHDCJFA_02606 7.25e-106 - 2.1.3.15, 6.4.1.3 - I ko:K01966 ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Carboxyl transferase domain
PDHDCJFA_02608 6.21e-119 glnA 6.3.1.2 - S ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 glutamine synthetase
PDHDCJFA_02609 1.33e-165 - 2.1.1.130, 2.1.1.151 - H ko:K03394 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko01000 Precorrin-2 C20-methyltransferase
PDHDCJFA_02610 0.000452 - - - - - - - -
PDHDCJFA_02612 7.4e-103 - - - L - - - regulation of translation
PDHDCJFA_02613 8.21e-74 - - - T - - - Sigma-54 interaction domain
PDHDCJFA_02614 2.14e-305 - - - S - - - Protein of unknown function (DUF2961)
PDHDCJFA_02615 9.09e-189 mtnA 5.3.1.23 - E ko:K08963 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
PDHDCJFA_02616 5.14e-34 rpsU - - J ko:K02970 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bS21 family
PDHDCJFA_02617 3.55e-121 upp 2.4.2.9 - F ko:K00761 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 uracil phosphoribosyltransferase
PDHDCJFA_02618 9.15e-236 - - - T - - - PAS domain
PDHDCJFA_02619 0.0 pepX2 3.4.14.12, 3.4.14.5 - E ko:K01278,ko:K18574 ko04974,map04974 ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 Peptidase, S9A B C family, catalytic domain protein
PDHDCJFA_02620 2.15e-194 - - - PT - - - Domain of unknown function (DUF4974)
PDHDCJFA_02621 1.1e-170 - - - P ko:K02001 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PDHDCJFA_02623 3.1e-115 ogt 2.1.1.63 - H ko:K00567,ko:K10778 - ko00000,ko01000,ko03000,ko03400 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PDHDCJFA_02624 6.14e-80 - - - K - - - HxlR-like helix-turn-helix
PDHDCJFA_02625 5.46e-208 - - - - - - - -
PDHDCJFA_02626 4.95e-269 - - - K - - - helix_turn_helix, arabinose operon control protein
PDHDCJFA_02627 2.19e-248 - - - S - - - Domain of unknown function (DUF4249)
PDHDCJFA_02628 9.88e-46 - 2.7.1.2 - G ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 glucokinase
PDHDCJFA_02629 5.75e-280 - - - G - - - Transporter, major facilitator family protein
PDHDCJFA_02631 1.08e-57 - - - E - - - COG NOG19114 non supervised orthologous group
PDHDCJFA_02632 3.85e-71 czcA - - V ko:K03296 - ko00000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDHDCJFA_02633 5.32e-209 ispH 1.17.7.4 - IM ko:K03527 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PDHDCJFA_02634 1.79e-211 folD 1.5.1.5, 3.5.4.9 - F ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PDHDCJFA_02635 1.88e-119 ffh 3.6.5.4 - U ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko01000,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PDHDCJFA_02638 0.0 - - - F ko:K21572 - ko00000,ko02000 SusD family
PDHDCJFA_02639 1e-80 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
PDHDCJFA_02640 1.31e-13 - - - - - - - -
PDHDCJFA_02641 1.08e-218 - - - - - - - -
PDHDCJFA_02642 1.6e-69 - - - - - - - -
PDHDCJFA_02643 1.01e-86 rpsK - - J ko:K02948 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PDHDCJFA_02644 1.45e-80 rpsM - - J ko:K02952 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PDHDCJFA_02645 1.84e-126 bioA 2.6.1.62 - H ko:K00833 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko00002,ko01000,ko01007 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor
PDHDCJFA_02647 2.44e-86 - - - MU - - - Efflux transporter, outer membrane factor
PDHDCJFA_02648 2.77e-157 - - - V ko:K03296 - ko00000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDHDCJFA_02649 4.94e-92 yggS - - S ko:K06997 - ko00000 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PDHDCJFA_02650 3.36e-232 - 1.3.98.1 - F ko:K00226 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of dihydroorotate to orotate
PDHDCJFA_02651 5.25e-313 - - - T ko:K02481 - ko00000,ko02022 COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains
PDHDCJFA_02652 4.21e-304 fabF 2.3.1.179 - I ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PDHDCJFA_02653 2.31e-155 - - - MU - - - Outer membrane efflux protein
PDHDCJFA_02655 2.09e-269 gcvT 2.1.2.10 - E ko:K00605 ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200 ko00000,ko00001,ko00002,ko01000 The glycine cleavage system catalyzes the degradation of glycine
PDHDCJFA_02656 8.06e-299 pepT 3.4.11.4 - E ko:K01258 - ko00000,ko01000,ko01002 Cleaves the N-terminal amino acid of tripeptides
PDHDCJFA_02657 0.0 purF 2.4.2.14 - F ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 Glutamine phosphoribosylpyrophosphate amidotransferase
PDHDCJFA_02658 3.83e-56 rpmA - - J ko:K02899 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL27 family
PDHDCJFA_02659 9.59e-67 rplU - - J ko:K02888 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to 23S rRNA in the presence of protein L20
PDHDCJFA_02660 3.12e-68 - - - K - - - sequence-specific DNA binding
PDHDCJFA_02661 1.08e-205 - 2.7.11.1 - S ko:K07154 - ko00000,ko01000,ko01001,ko02048 domain protein
PDHDCJFA_02663 6.43e-282 - - - H - - - Flavin containing amine oxidoreductase
PDHDCJFA_02664 7.48e-162 - - - M - - - Glycosyltransferase, group 2 family protein
PDHDCJFA_02665 1.55e-71 - - - M - - - Glycosyltransferase Family 4
PDHDCJFA_02666 2.23e-57 - - - M - - - Glycosyl transferase family 2
PDHDCJFA_02668 3.21e-267 vicK - - T - - - Histidine kinase
PDHDCJFA_02669 6.6e-50 - - - K - - - Helix-turn-helix domain
PDHDCJFA_02671 1.67e-222 - - - L - - - Phage integrase, N-terminal SAM-like domain
PDHDCJFA_02672 0.0 - - - S - - - Susd and RagB outer membrane lipoprotein
PDHDCJFA_02673 2.26e-75 rnd - - L - - - 3'-5' exonuclease
PDHDCJFA_02675 5.89e-66 - - - S - - - Stress responsive A/B Barrel Domain
PDHDCJFA_02676 1.64e-108 - - - S - - - Putative redox-active protein (C_GCAxxG_C_C)
PDHDCJFA_02677 1.95e-158 - - - S ko:K07507 - ko00000,ko02000 MgtC family
PDHDCJFA_02679 5.12e-80 - - - T - - - Cyclic nucleotide-monophosphate binding domain
PDHDCJFA_02680 4.42e-185 mepA_7 - - V - - - Psort location CytoplasmicMembrane, score 10.00
PDHDCJFA_02681 1.69e-45 - - - S - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_02682 2.23e-85 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
PDHDCJFA_02683 2.05e-122 rimO 2.8.4.4 - J ko:K14441 - ko00000,ko01000,ko03009 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12
PDHDCJFA_02684 4.8e-61 himA - - L ko:K03530,ko:K04764 - ko00000,ko03032,ko03036,ko03400 Belongs to the bacterial histone-like protein family
PDHDCJFA_02685 0.0 - - - S - - - Putative glucoamylase
PDHDCJFA_02686 1.19e-47 - - - T - - - Transcriptional regulator
PDHDCJFA_02687 7.83e-284 bfce 5.1.3.11 - G ko:K16213 - ko00000,ko01000 Catalyzes the reversible epimerization of cellobiose to 4-O-beta-D-glucopyranosyl-D-mannose (Glc-Man)
PDHDCJFA_02688 2.75e-267 - 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolases, choloylglycine hydrolase family
PDHDCJFA_02689 1.53e-136 - - - T - - - Histidine kinase-like ATPases
PDHDCJFA_02690 5.08e-60 - - - S - - - COG NOG13976 non supervised orthologous group
PDHDCJFA_02691 5.87e-120 qacR - - K - - - tetR family
PDHDCJFA_02693 8.64e-100 - 3.6.4.13 - L ko:K05592 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 Belongs to the DEAD box helicase family
PDHDCJFA_02695 2.09e-161 - - - V ko:K02004 - ko00000,ko00002,ko02000 Efflux ABC transporter, permease protein
PDHDCJFA_02696 9.78e-110 - 3.5.1.124 - S ko:K05520 - ko00000,ko01000,ko01002 DJ-1/PfpI family
PDHDCJFA_02697 0.0 - - - T - - - Response regulator receiver domain protein
PDHDCJFA_02698 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDHDCJFA_02699 0.0 - - - M ko:K21572 - ko00000,ko02000 SusD family
PDHDCJFA_02700 0.0 - - - G - - - Glycosyl hydrolase family 92
PDHDCJFA_02702 2.54e-113 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PDHDCJFA_02703 1.37e-122 wbbL_1 - - S ko:K07011 - ko00000 glycosyl transferase family 2
PDHDCJFA_02704 4.13e-98 - - - V ko:K03327 - ko00000,ko02000 MatE
PDHDCJFA_02705 1.12e-94 - - - O - - - META domain
PDHDCJFA_02706 1.59e-104 - - - O - - - META domain
PDHDCJFA_02707 3.02e-310 - - - - - - - -
PDHDCJFA_02709 1.72e-71 rplR - - J ko:K02881 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PDHDCJFA_02710 4.81e-127 rplF - - J ko:K02933 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PDHDCJFA_02711 0.0 yicJ_1 - - G ko:K03292 - ko00000 MFS/sugar transport protein
PDHDCJFA_02712 0.0 - - - V - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDHDCJFA_02713 3.29e-117 argG 6.3.4.5 - E ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 ko00000,ko00001,ko00002,ko01000,ko04147 argininosuccinate synthase
PDHDCJFA_02714 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 Efflux ABC transporter, permease protein
PDHDCJFA_02715 2.01e-112 - - - V ko:K02004 - ko00000,ko00002,ko02000 Efflux ABC transporter, permease protein
PDHDCJFA_02716 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDHDCJFA_02717 0.0 - - - P - - - TonB-dependent receptor
PDHDCJFA_02718 7.37e-230 - - - S - - - AAA domain
PDHDCJFA_02719 1.26e-113 - - - - - - - -
PDHDCJFA_02721 1.27e-97 valS 6.1.1.9 - J ko:K01873 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PDHDCJFA_02724 0.0 - 3.1.6.1 - P ko:K01130 ko00140,ko00600,map00140,map00600 ko00000,ko00001,ko01000 C-terminal region of aryl-sulfatase
PDHDCJFA_02725 9.65e-135 - - - S - - - ATP cob(I)alamin adenosyltransferase
PDHDCJFA_02726 1.31e-209 - 3.1.3.15 - E ko:K04486 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Histidinol phosphatase
PDHDCJFA_02727 1.05e-178 - - - V ko:K02004 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PDHDCJFA_02728 8.49e-307 - - - - - - - -
PDHDCJFA_02729 8.16e-163 - - - S - - - COG NOG27381 non supervised orthologous group
PDHDCJFA_02730 5.57e-163 corC_1 - - P ko:K03699 - ko00000,ko02042 Transporter associated domain
PDHDCJFA_02731 1.76e-306 alr 5.1.1.1, 6.3.2.10 - M ko:K01775,ko:K01929 ko00300,ko00473,ko00550,ko01100,ko01502,map00300,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PDHDCJFA_02734 4.05e-88 - 1.12.1.3 - C ko:K17992 - ko00000,ko01000 Ferredoxin
PDHDCJFA_02735 1.08e-158 cysE 2.3.1.30 - E ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 ko00000,ko00001,ko00002,ko01000 Serine acetyltransferase
PDHDCJFA_02736 7.47e-175 purA 6.3.4.4 - F ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PDHDCJFA_02738 4.25e-66 - - - M ko:K21572 - ko00000,ko02000 RagB SusD domain protein
PDHDCJFA_02739 0.0 nqrA 1.6.5.8 - C ko:K00346 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PDHDCJFA_02740 9.71e-279 atpD 3.6.3.14 - C ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PDHDCJFA_02741 3.27e-81 ndk 2.7.4.6 - F ko:K00940 ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016 ko00000,ko00001,ko00002,ko01000,ko04131 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
PDHDCJFA_02742 1.74e-173 - - - M - - - glycosyl transferase group 1
PDHDCJFA_02743 2.22e-215 eam 5.4.3.2 - E ko:K01843 ko00310,map00310 ko00000,ko00001,ko01000 KamA family
PDHDCJFA_02744 2.04e-261 - - - S - - - Domain of unknown function (DUF4249)
PDHDCJFA_02746 4.18e-234 - - - M - - - metallophosphoesterase
PDHDCJFA_02747 5.27e-185 frdB 1.3.5.1, 1.3.5.4 - C ko:K00240 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 succinate dehydrogenase
PDHDCJFA_02748 4.25e-135 sdhA 1.3.5.1, 1.3.5.4 - C ko:K00239 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134 ko00000,ko00001,ko00002,ko01000 SdhA B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC D which are the membrane components and form cytochrome b556
PDHDCJFA_02751 1.23e-249 bga 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PDHDCJFA_02752 1.46e-275 clpX - - O ko:K03544 ko04112,map04112 ko00000,ko00001,ko03110 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PDHDCJFA_02753 2.88e-185 - - - I - - - Acid phosphatase homologues
PDHDCJFA_02754 2.72e-118 glaB - - M - - - Parallel beta-helix repeats
PDHDCJFA_02755 3.69e-203 - - - K - - - helix_turn_helix, arabinose operon control protein
PDHDCJFA_02757 7.46e-258 - - - L - - - Domain of unknown function (DUF2027)
PDHDCJFA_02758 1.55e-221 - - - S - - - Sugar-binding cellulase-like
PDHDCJFA_02759 0.0 - - - G - - - polysaccharide deacetylase
PDHDCJFA_02761 2.4e-120 - - - K - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_02762 2.81e-11 - - - S ko:K07075 - ko00000 PFAM Nucleotidyltransferase domain
PDHDCJFA_02763 9.61e-110 - - - M - - - Outer membrane protein beta-barrel domain
PDHDCJFA_02764 1.47e-148 pgmB - - S - - - Haloacid dehalogenase-like hydrolase
PDHDCJFA_02765 0.0 glgB 2.4.1.18 CBM48,GH13 G ko:K00700 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 1,4-alpha-glucan branching enzyme
PDHDCJFA_02766 2.34e-241 manA 5.3.1.8 - G ko:K01809 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 mannose-6-phosphate isomerase
PDHDCJFA_02767 8.9e-131 tag 3.2.2.20 - L ko:K01246 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 DNA-3-methyladenine glycosylase
PDHDCJFA_02768 2.47e-219 panE 1.1.1.169 - H ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PDHDCJFA_02769 6.43e-203 pdxK 2.7.1.35 - H ko:K00868 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko01000 Phosphomethylpyrimidine kinase
PDHDCJFA_02770 0.0 hcp 1.7.99.1 - C ko:K05601 ko00910,map00910 ko00000,ko00001,ko01000 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O
PDHDCJFA_02771 2.7e-146 - - - K - - - Cyclic nucleotide-monophosphate binding domain
PDHDCJFA_02772 2.47e-224 - - - - - - - -
PDHDCJFA_02773 1.8e-171 - - - - - - - -
PDHDCJFA_02774 6.06e-21 nanA 4.1.3.3, 4.2.1.41, 4.3.3.7 - EM ko:K01639,ko:K01707,ko:K01714 ko00053,ko00261,ko00300,ko00520,ko01100,ko01110,ko01120,ko01130,ko01230,map00053,map00261,map00300,map00520,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the DapA family
PDHDCJFA_02776 9.76e-89 - - - L - - - Phage integrase, N-terminal SAM-like domain
PDHDCJFA_02777 5.77e-179 yfmR - - S ko:K15738 - ko00000,ko02000 ABC transporter
PDHDCJFA_02778 9.67e-272 - - - EGP - - - Major Facilitator Superfamily
PDHDCJFA_02779 4.72e-79 - - - S - - - COG NOG30654 non supervised orthologous group
PDHDCJFA_02781 1.41e-20 - - - S - - - COG NOG30654 non supervised orthologous group
PDHDCJFA_02782 1.23e-83 - - - S - - - COG NOG30654 non supervised orthologous group
PDHDCJFA_02783 5.68e-204 - - - S - - - Uncharacterised 5xTM membrane BCR, YitT family COG1284
PDHDCJFA_02784 7.46e-292 aspC 2.6.1.1, 2.6.1.2, 2.6.1.66 - E ko:K00812,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko01000,ko01007 Aspartate aminotransferase
PDHDCJFA_02785 8.57e-289 lolE_1 - - M ko:K09808 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PDHDCJFA_02786 7.85e-122 vsr - - L ko:K07458 - ko00000,ko01000,ko03400 May nick specific sequences that contain T G mispairs resulting from m5C-deamination
PDHDCJFA_02787 3.51e-272 - - - M - - - Glycosyltransferase family 2
PDHDCJFA_02788 1.29e-280 lysA 4.1.1.20 - E ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PDHDCJFA_02789 5.32e-315 trpB 4.2.1.20 - E ko:K06001 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PDHDCJFA_02790 1.11e-282 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
PDHDCJFA_02791 1.21e-227 fumB 4.2.1.2 - C ko:K01676 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible hydration of fumarate to (S)- malate
PDHDCJFA_02792 4.39e-244 zraR_2 - - T - - - COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains
PDHDCJFA_02793 1.91e-130 cobC 3.1.3.73 - G ko:K02226 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 phosphoglycerate mutase
PDHDCJFA_02794 1.07e-139 cobS 2.7.8.26 - H ko:K02233 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
PDHDCJFA_02795 1.35e-281 - 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Belongs to the metallo-dependent hydrolases superfamily. NagA family
PDHDCJFA_02796 4.59e-281 - 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Amidohydrolase family
PDHDCJFA_02797 0.0 - - - S ko:K06158 - ko00000,ko03012 glycosyl transferase family 2
PDHDCJFA_02798 8.49e-217 - - - S ko:K06889 - ko00000 Serine aminopeptidase, S33
PDHDCJFA_02799 0.0 - - - F ko:K21572 - ko00000,ko02000 SusD family
PDHDCJFA_02800 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PDHDCJFA_02801 2.4e-230 trxB 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PDHDCJFA_02802 0.0 hppA 3.6.1.1 - C ko:K15987 ko00190,map00190 ko00000,ko00001,ko01000 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane
PDHDCJFA_02803 0.0 glnA 6.3.1.2 - S ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 Belongs to the glutamine synthetase family
PDHDCJFA_02804 1.8e-218 - - - G - - - Xylose isomerase-like TIM barrel
PDHDCJFA_02805 1.1e-312 - - - V - - - Mate efflux family protein
PDHDCJFA_02806 0.0 metZ 2.5.1.49 - E ko:K01740,ko:K10764 ko00270,ko00920,ko01100,map00270,map00920,map01100 ko00000,ko00001,ko01000 O-acetylhomoserine aminocarboxypropyltransferase cysteine synthase
PDHDCJFA_02807 1.44e-274 - - - M - - - Glycosyl transferase family 1
PDHDCJFA_02808 4.17e-189 - - - S - - - Calcineurin-like phosphoesterase superfamily domain
PDHDCJFA_02809 9.37e-127 - - - K - - - Helix-turn-helix domain
PDHDCJFA_02810 2.29e-81 - - - S ko:K06996 - ko00000 Glyoxalase-like domain
PDHDCJFA_02811 3.2e-205 - - - S - - - Putative beta-lactamase-inhibitor-like, PepSY-like
PDHDCJFA_02812 2.61e-146 - - - S - - - Protein of unknown function (DUF3256)
PDHDCJFA_02813 1.13e-193 - - - EG ko:K08978 - ko00000,ko02000 EamA-like transporter family
PDHDCJFA_02814 1.5e-180 truA 5.4.99.12 - J ko:K06173 - ko00000,ko01000,ko03016 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PDHDCJFA_02815 0.0 - - - P ko:K07085 - ko00000 Predicted Permease Membrane Region
PDHDCJFA_02816 0.0 - 3.2.1.55 GH51 G ko:K01209 ko00520,map00520 ko00000,ko00001,ko01000 PFAM alpha-L-arabinofuranosidase domain protein
PDHDCJFA_02817 1.09e-88 - - - S - - - YjbR
PDHDCJFA_02818 0.0 uvrD2 - - L - - - COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member
PDHDCJFA_02819 5.54e-140 - - - EGP ko:K08169 - ko00000,ko02000 Sugar (and other) transporter
PDHDCJFA_02820 6.19e-95 - - - EGP ko:K08169 - ko00000,ko02000 Sugar (and other) transporter
PDHDCJFA_02821 1.14e-118 - - - - - - - -
PDHDCJFA_02822 4.25e-121 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PDHDCJFA_02824 2.04e-86 - - - S - - - Protein of unknown function, DUF488
PDHDCJFA_02825 0.0 pbpF - - M - - - Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
PDHDCJFA_02826 9.26e-270 - - - T - - - His Kinase A (phosphoacceptor) domain
PDHDCJFA_02827 1.24e-161 cusR - - T ko:K07665 ko02020,map02020 ko00000,ko00001,ko00002,ko01504,ko02022 Transcriptional regulatory protein, C terminal
PDHDCJFA_02828 0.0 czcA_1 - - P ko:K15726 - ko00000,ko02000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDHDCJFA_02829 1.01e-251 czcB - - M ko:K15727 - ko00000,ko02000 Barrel-sandwich domain of CusB or HlyD membrane-fusion
PDHDCJFA_02830 5.26e-174 czcC - - MU ko:K15725 - ko00000,ko02000 Outer membrane efflux protein
PDHDCJFA_02831 6.15e-183 dpm1 2.4.1.83 GT2 S ko:K00721 ko00510,ko01100,map00510,map01100 ko00000,ko00001,ko01000,ko01003 Dolichyl-phosphate beta-D-mannosyltransferase
PDHDCJFA_02832 1.72e-189 - - - T - - - His Kinase A (phosphoacceptor) domain
PDHDCJFA_02833 7.53e-113 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PDHDCJFA_02834 1.41e-230 sdaA 4.3.1.17 - E ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko01000 Serine dehydratase
PDHDCJFA_02837 1.15e-39 - - - P - - - mercury ion transmembrane transporter activity
PDHDCJFA_02838 6.17e-100 copA 3.6.3.4, 3.6.3.54 - P ko:K01533,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 Copper-exporting ATPase
PDHDCJFA_02839 2.4e-231 cobD 6.3.1.10 - H ko:K02227 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
PDHDCJFA_02840 4.66e-164 - - - F - - - NUDIX domain
PDHDCJFA_02841 7.36e-122 galK 2.7.1.6 - G ko:K00849 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GHMP kinase family. GalK subfamily
PDHDCJFA_02842 3.65e-44 - - - - - - - -
PDHDCJFA_02846 1.78e-207 natA - - S ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PDHDCJFA_02848 2.52e-204 fabD 2.3.1.39 - I ko:K00645 ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 malonyl CoA-acyl carrier protein transacylase
PDHDCJFA_02849 3.16e-190 - - - I - - - alpha/beta hydrolase fold
PDHDCJFA_02851 0.0 - - - S - - - Susd and RagB outer membrane lipoprotein
PDHDCJFA_02852 0.0 - - - P - - - Carboxypeptidase regulatory-like domain
PDHDCJFA_02853 4.58e-265 - - - S - - - Susd and RagB outer membrane lipoprotein
PDHDCJFA_02854 5.89e-231 metF 1.5.1.20 - C ko:K00297 ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523 ko00000,ko00001,ko00002,ko01000 Methylenetetrahydrofolate reductase
PDHDCJFA_02855 4.81e-292 - - - S ko:K07133 - ko00000 Psort location Cytoplasmic, score 8.96
PDHDCJFA_02856 4.17e-269 - 4.1.1.3 - C ko:K01572 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000,ko02000 Na+-transporting oxaloacetate decarboxylase beta subunit
PDHDCJFA_02857 1.01e-08 - - - - - - - -
PDHDCJFA_02858 4.6e-309 - - - S ko:K07133 - ko00000 AAA domain
PDHDCJFA_02859 0.0 - - - S - - - C terminal of Calcineurin-like phosphoesterase
PDHDCJFA_02860 0.0 - - - P - - - Carboxypeptidase regulatory-like domain
PDHDCJFA_02862 2.84e-143 susD - - M ko:K21572 - ko00000,ko02000 SusD family
PDHDCJFA_02863 3.09e-122 - - - S - - - ATPases associated with a variety of cellular activities
PDHDCJFA_02864 1.97e-168 - - - E ko:K04477 - ko00000 DNA polymerase alpha chain like domain
PDHDCJFA_02865 0.0 - - - O - - - Tetratricopeptide repeat protein
PDHDCJFA_02866 3.39e-167 - - - S - - - Beta-lactamase superfamily domain
PDHDCJFA_02867 3.16e-278 - - - V ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
PDHDCJFA_02868 6.36e-277 - - - V ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
PDHDCJFA_02869 3.74e-219 - - - M ko:K01993 - ko00000 Biotin-lipoyl like
PDHDCJFA_02870 0.0 - - - MU - - - Outer membrane efflux protein
PDHDCJFA_02871 1.6e-165 - - - G ko:K08223 - ko00000,ko02000 Major Facilitator Superfamily
PDHDCJFA_02872 3.19e-263 murG 2.4.1.227 GT28 M ko:K02563 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PDHDCJFA_02873 4.31e-295 ftsW - - D ko:K03588 ko04112,map04112 ko00000,ko00001,ko02000,ko03036 Belongs to the SEDS family
PDHDCJFA_02874 0.0 murD 6.3.2.9 - M ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PDHDCJFA_02875 6.12e-296 mraY 2.7.8.13 - M ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PDHDCJFA_02876 0.0 murE 6.3.2.13 - M ko:K01928 ko00300,ko00550,map00300,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PDHDCJFA_02877 0.0 ftsI 3.4.16.4 - M ko:K03587 ko00550,ko01501,map00550,map01501 ko00000,ko00001,ko01000,ko01011,ko03036 Penicillin-binding protein, transpeptidase domain protein
PDHDCJFA_02878 1.15e-75 - - - S - - - Psort location Cytoplasmic, score 8.96
PDHDCJFA_02879 3.15e-29 rsmH 2.1.1.199 - J ko:K03438 - ko00000,ko01000,ko03009 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PDHDCJFA_02880 1.06e-296 - - - P ko:K03308 - ko00000 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
PDHDCJFA_02882 5.49e-109 - - - - - - - -
PDHDCJFA_02885 1.96e-264 - - - M - - - Alginate export
PDHDCJFA_02886 5.88e-97 - - - M - - - Domain of unknown function, B. Theta Gene description (DUF3868)
PDHDCJFA_02887 4.28e-172 - 1.3.1.9 - S ko:K02371 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 2-nitropropane dioxygenase
PDHDCJFA_02889 6.84e-09 - - - K - - - Fic/DOC family
PDHDCJFA_02891 2.46e-118 - 3.1.3.97 - S ko:K07053 - ko00000,ko01000 Domain of unknown function
PDHDCJFA_02892 2.11e-96 - - - G - - - Bacterial alpha-L-rhamnosidase C-terminal domain
PDHDCJFA_02893 4.32e-147 - - - L - - - DNA-binding protein
PDHDCJFA_02894 4.32e-163 - - - S - - - DinB superfamily
PDHDCJFA_02895 3.65e-62 - - - S - - - Belongs to the UPF0145 family
PDHDCJFA_02896 5.98e-131 degQ - - O - - - deoxyribonuclease HsdR
PDHDCJFA_02897 5.18e-161 sbcD - - L ko:K03547 - ko00000,ko03400 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PDHDCJFA_02898 2.9e-227 - - - PT - - - Domain of unknown function (DUF4974)
PDHDCJFA_02899 5.75e-117 leuA 2.3.3.13 - E ko:K01649 ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PDHDCJFA_02900 2.96e-181 - - - DT - - - aminotransferase class I and II
PDHDCJFA_02901 5.26e-88 - - - S - - - Protein of unknown function (DUF3037)
PDHDCJFA_02902 1.61e-141 - - - M - - - Protein of unknown function (DUF3575)
PDHDCJFA_02903 1.71e-139 - - - K - - - Transcriptional regulator, LuxR family
PDHDCJFA_02904 8.39e-181 - - - D ko:K07322 - ko00000 Di-iron-containing protein involved in the repair of iron-sulfur clusters
PDHDCJFA_02905 7.76e-281 - - - J - - - translation initiation inhibitor, yjgF family
PDHDCJFA_02906 2.64e-159 - - - - - - - -
PDHDCJFA_02907 8.51e-308 - - - P - - - phosphate-selective porin O and P
PDHDCJFA_02908 0.0 - - - C - - - Di-haem oxidoreductase, putative peroxidase
PDHDCJFA_02909 2.63e-289 - - - P ko:K07231 - ko00000 Imelysin
PDHDCJFA_02910 0.0 - - - S - - - Psort location OuterMembrane, score
PDHDCJFA_02911 1.94e-227 - - - S - - - Fimbrillin-like
PDHDCJFA_02912 6.09e-251 - - - K - - - Participates in transcription elongation, termination and antitermination
PDHDCJFA_02913 3.6e-56 - - - S - - - Lysine exporter LysO
PDHDCJFA_02914 1.91e-83 - - - - - - - -
PDHDCJFA_02916 6.02e-137 - - - S - - - COG NOG27188 non supervised orthologous group
PDHDCJFA_02917 4.03e-141 - - - M - - - Outer membrane protein beta-barrel domain
PDHDCJFA_02920 5.97e-173 bglX 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Fibronectin type III-like domain
PDHDCJFA_02921 1.26e-308 dapL 2.6.1.83 - E ko:K10206 ko00300,ko01100,ko01110,ko01130,ko01230,map00300,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate
PDHDCJFA_02922 3.01e-42 - - - G - - - Glycosyl hydrolase family 92
PDHDCJFA_02923 4.19e-198 - - - S - - - Peptidase of plants and bacteria
PDHDCJFA_02924 1.08e-236 fbp 3.1.3.11 - G ko:K04041 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 catalyzes the formation of fructose 6-phosphate from fructose-1,6-bisphosphate
PDHDCJFA_02925 1.89e-276 - - - S - - - COGs COG4299 conserved
PDHDCJFA_02927 5.36e-45 - - - S - - - ParE toxin of type II toxin-antitoxin system, parDE
PDHDCJFA_02928 7.29e-78 ilvC 1.1.1.86 - E ko:K00053 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Ketol-acid reductoisomerase
PDHDCJFA_02929 1.57e-60 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PDHDCJFA_02930 3.92e-292 - 3.1.1.53 - S ko:K05970 - ko00000,ko01000 Pfam:DUF303
PDHDCJFA_02931 3.69e-142 - - - K ko:K20968 ko02025,map02025 ko00000,ko00001,ko03000 helix_turn_helix, arabinose operon control protein
PDHDCJFA_02933 0.0 ndh 1.6.99.3 - C ko:K03885 ko00190,map00190 ko00000,ko00001,ko01000 NADH dehydrogenase
PDHDCJFA_02934 0.0 - - - P - - - Outer membrane protein beta-barrel family
PDHDCJFA_02936 0.0 - 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 Long-chain fatty acid--CoA ligase
PDHDCJFA_02937 2.98e-90 - - - K ko:K07722 - ko00000,ko03000 transcriptional regulator
PDHDCJFA_02938 4.41e-127 - - - S - - - Susd and RagB outer membrane lipoprotein

eggNOG-mapper v2.1.12 (Database: eggNOG v5.0.2, Mar. 2021 release)