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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
PAMIAFPB_00001	4.61e-189	-	-	-	U	-	-	-	Relaxase mobilization nuclease domain protein
PAMIAFPB_00002	5.31e-99	-	-	-	-	-	-	-	-
PAMIAFPB_00003	1.15e-47	-	-	-	-	-	-	-	-
PAMIAFPB_00004	2.17e-145	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00005	8.79e-93	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00006	3.4e-50	-	-	-	-	-	-	-	-
PAMIAFPB_00007	2.63e-62	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00008	1.17e-42	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00009	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PAMIAFPB_00010	5.67e-177	-	1.5.1.38, 1.5.1.39	-	C	ko:K19285,ko:K19286	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	Nitroreductase family
PAMIAFPB_00011	0.0	nrd	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen
PAMIAFPB_00012	0.0	malQ	2.4.1.25	GH77	G	ko:K00705	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 9.26
PAMIAFPB_00013	6.77e-247	-	-	-	G	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_00014	3.61e-244	-	-	-	M	-	-	-	Glycosyl transferases group 1
PAMIAFPB_00015	9.61e-84	folB	1.13.11.81, 4.1.2.25, 5.1.99.8	-	H	ko:K01633	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PAMIAFPB_00016	6.68e-125	mgsA	4.2.3.3	-	G	ko:K01734	ko00640,ko01120,map00640,map01120	ko00000,ko00001,ko01000	methylglyoxal synthase
PAMIAFPB_00017	5.02e-256	-	-	-	S	ko:K07011	-	ko00000	Glycosyl transferase family group 2
PAMIAFPB_00018	6.88e-210	waaM	2.3.1.241	-	M	ko:K02517	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase
PAMIAFPB_00019	0.0	yqeV	2.8.4.5	-	J	ko:K18707	-	ko00000,ko01000,ko03016	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00020	0.0	-	6.2.1.3	-	I	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	Psort location CytoplasmicMembrane, score 9.82
PAMIAFPB_00021	3.99e-20	-	-	-	S	-	-	-	COG NOG38865 non supervised orthologous group
PAMIAFPB_00022	2.73e-209	-	-	-	M	-	-	-	COG COG1082 Sugar phosphate isomerases epimerases
PAMIAFPB_00023	1.87e-218	-	-	-	G	-	-	-	COG NOG16664 non supervised orthologous group
PAMIAFPB_00024	0.0	-	-	-	S	-	-	-	Tat pathway signal sequence domain protein
PAMIAFPB_00025	8.07e-284	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00026	0.0	-	-	-	G	-	-	-	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
PAMIAFPB_00027	1.79e-91	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	binds to the 23S rRNA
PAMIAFPB_00028	3.78e-57	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PAMIAFPB_00029	8.84e-74	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
PAMIAFPB_00030	3.91e-100	ohrR	-	-	K	-	-	-	Transcriptional regulator, MarR family
PAMIAFPB_00031	3.98e-29	-	-	-	-	-	-	-	-
PAMIAFPB_00032	2.14e-166	rprY	-	-	K	-	-	-	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PAMIAFPB_00033	0.0	rprX	2.7.13.3	-	T	ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	two-component regulatory system, sensor kinase protein
PAMIAFPB_00034	0.0	fusA2	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Psort location Cytoplasmic, score 9.26
PAMIAFPB_00035	1.97e-277	hemN	-	-	H	-	-	-	Involved in the biosynthesis of porphyrin-containing compound
PAMIAFPB_00036	9.3e-120	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
PAMIAFPB_00037	1.81e-94	-	-	-	-	-	-	-	-
PAMIAFPB_00038	2.14e-199	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PAMIAFPB_00039	2.43e-221	-	-	-	P	-	-	-	TonB-dependent receptor
PAMIAFPB_00040	0.0	-	-	-	P	-	-	-	TonB-dependent receptor
PAMIAFPB_00041	1.66e-247	-	-	-	S	-	-	-	COG NOG27441 non supervised orthologous group
PAMIAFPB_00042	4.65e-157	-	-	-	P	-	-	-	ATPases associated with a variety of cellular activities
PAMIAFPB_00043	5.87e-65	-	-	-	-	-	-	-	-
PAMIAFPB_00044	1.62e-58	-	-	-	S	-	-	-	COG NOG18433 non supervised orthologous group
PAMIAFPB_00045	1.65e-141	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_00046	8.36e-74	-	-	-	S	-	-	-	COG NOG30654 non supervised orthologous group
PAMIAFPB_00047	1.67e-251	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00048	4.27e-156	-	-	-	S	ko:K07025	-	ko00000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00049	7.4e-179	-	-	-	K	-	-	-	helix_turn_helix, Lux Regulon
PAMIAFPB_00050	2.49e-155	-	-	-	S	ko:K09702	-	ko00000	Protein of unknown function (DUF1349)
PAMIAFPB_00051	2.56e-249	-	-	-	S	-	-	-	COG NOG15865 non supervised orthologous group
PAMIAFPB_00052	3.95e-292	aroA	2.5.1.19	-	E	ko:K00800	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PAMIAFPB_00053	7.65e-136	-	-	-	T	-	-	-	COG COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
PAMIAFPB_00054	2.21e-166	-	-	-	S	-	-	-	Enoyl-(Acyl carrier protein) reductase
PAMIAFPB_00055	3.73e-248	-	-	-	M	-	-	-	Peptidase, M28 family
PAMIAFPB_00056	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
PAMIAFPB_00057	0.0	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	Alpha-L-fucosidase
PAMIAFPB_00058	0.0	-	-	-	K	-	-	-	GxGYxY sequence motif in domain of unknown function N-terminal
PAMIAFPB_00059	1.28e-229	-	-	-	M	-	-	-	F5/8 type C domain
PAMIAFPB_00060	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_00061	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_00062	8.59e-224	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PAMIAFPB_00063	3.21e-130	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PAMIAFPB_00064	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
PAMIAFPB_00065	0.0	-	-	-	S	-	-	-	GxGYxY sequence motif in domain of unknown function N-terminal
PAMIAFPB_00066	0.0	-	-	-	E	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_00067	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_00068	6.53e-240	-	-	-	S	-	-	-	Concanavalin A-like lectin/glucanases superfamily
PAMIAFPB_00069	0.0	-	-	-	T	-	-	-	COG NOG26059 non supervised orthologous group
PAMIAFPB_00071	1.23e-86	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00072	8.63e-184	znuB	-	-	P	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
PAMIAFPB_00073	5.09e-93	yjeE	-	-	S	ko:K06925	-	ko00000,ko03016	Psort location Cytoplasmic, score
PAMIAFPB_00074	1.56e-46	-	-	-	S	-	-	-	COG NOG34862 non supervised orthologous group
PAMIAFPB_00075	5.64e-312	-	-	-	S	-	-	-	conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
PAMIAFPB_00076	4.07e-221	-	-	-	S	ko:K03924	-	ko00000,ko01000	ATPase family associated with various cellular activities (AAA)
PAMIAFPB_00077	1.42e-308	-	-	-	S	-	-	-	COG NOG26634 non supervised orthologous group
PAMIAFPB_00078	4.2e-145	-	-	-	S	-	-	-	Domain of unknown function (DUF4129)
PAMIAFPB_00079	1.07e-193	-	-	-	-	-	-	-	-
PAMIAFPB_00080	1.94e-230	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_00081	0.0	-	-	-	S	-	-	-	Peptidase C10 family
PAMIAFPB_00083	0.0	-	-	-	S	-	-	-	Peptidase C10 family
PAMIAFPB_00084	4.97e-309	-	-	-	S	-	-	-	Peptidase C10 family
PAMIAFPB_00085	1.66e-05	-	-	-	S	-	-	-	Domain of unknown function (DUF3244)
PAMIAFPB_00086	1.53e-291	-	-	-	L	-	-	-	COG COG3385 FOG Transposase and inactivated derivatives
PAMIAFPB_00087	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat
PAMIAFPB_00088	6.29e-163	-	-	-	S	-	-	-	serine threonine protein kinase
PAMIAFPB_00089	8.47e-139	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00090	2.73e-202	-	-	-	K	-	-	-	AraC-like ligand binding domain
PAMIAFPB_00091	9.44e-109	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_00092	6.82e-72	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00093	1.17e-71	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
PAMIAFPB_00094	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III alpha subunit
PAMIAFPB_00095	9.81e-165	psd	4.1.1.65	-	I	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)
PAMIAFPB_00096	3.96e-163	pssA	2.7.8.8	-	I	ko:K17103	ko00260,ko00564,ko01100,ko01110,map00260,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PAMIAFPB_00097	5.97e-56	-	-	-	S	-	-	-	Domain of unknown function (DUF4834)
PAMIAFPB_00098	7.61e-102	tadA	3.5.4.33	-	FJ	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PAMIAFPB_00099	6.13e-48	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00100	4.42e-84	-	-	-	L	ko:K07460	-	ko00000	Belongs to the UPF0102 family
PAMIAFPB_00101	3.3e-59	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00102	3.32e-179	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	biotin acetyl-CoA-carboxylase ligase
PAMIAFPB_00103	0.0	-	-	-	M	-	-	-	COG0793 Periplasmic protease
PAMIAFPB_00104	2.28e-149	-	-	-	S	-	-	-	COG NOG28155 non supervised orthologous group
PAMIAFPB_00105	1.61e-308	dinF	-	-	V	ko:K03327	-	ko00000,ko02000	MATE efflux family protein
PAMIAFPB_00106	4.28e-163	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
PAMIAFPB_00108	2.81e-258	-	-	-	D	-	-	-	Tetratricopeptide repeat
PAMIAFPB_00110	0.0	-	-	-	P	-	-	-	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
PAMIAFPB_00111	7.49e-64	-	-	-	P	-	-	-	RyR domain
PAMIAFPB_00112	1.74e-184	-	-	-	EG	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_00113	1.37e-123	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PAMIAFPB_00114	4.65e-229	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PAMIAFPB_00115	2.1e-248	-	-	-	M	ko:K03585	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMIAFPB_00116	0.0	bepE_4	-	-	V	ko:K03296,ko:K18138	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMIAFPB_00117	1.07e-306	bepE_4	-	-	V	ko:K03296,ko:K18138	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMIAFPB_00118	1.02e-311	tolC	-	-	MU	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_00119	4.09e-273	pelA	3.1.1.11	-	G	ko:K01051	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	pectate lyase
PAMIAFPB_00120	2.16e-286	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_00121	0.0	fumB	4.2.1.2	-	C	ko:K01676	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible hydration of fumarate to (S)- malate
PAMIAFPB_00122	0.0	-	-	-	JM	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00123	2.46e-30	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PAMIAFPB_00124	2.46e-233	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PAMIAFPB_00125	0.0	-	-	-	H	-	-	-	Susd and RagB outer membrane lipoprotein
PAMIAFPB_00126	1.53e-219	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_00127	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_00128	7.91e-120	-	-	-	S	-	-	-	Lipid-binding putative hydrolase
PAMIAFPB_00129	2.51e-168	-	-	-	S	-	-	-	Domain of unknown function (DUF5012)
PAMIAFPB_00130	0.0	-	-	-	H	-	-	-	Susd and RagB outer membrane lipoprotein
PAMIAFPB_00131	0.0	-	-	-	P	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_00132	4.23e-177	-	-	-	P	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_00134	5.78e-50	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_00135	3.11e-179	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_00136	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_00137	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_00138	4.82e-147	-	-	-	U	ko:K05595	-	ko00000,ko02000	UPF0056 membrane protein
PAMIAFPB_00139	1.24e-168	yjjG	-	-	S	ko:K07025	-	ko00000	HAD hydrolase, TIGR02254 family
PAMIAFPB_00140	1.04e-171	-	-	-	S	-	-	-	Transposase
PAMIAFPB_00141	4.31e-157	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PAMIAFPB_00142	8.1e-106	-	-	-	S	-	-	-	COG NOG23390 non supervised orthologous group
PAMIAFPB_00143	2.2e-120	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
PAMIAFPB_00144	1.42e-250	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_00146	2.27e-289	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_00147	1.39e-113	-	-	-	K	-	-	-	FR47-like protein
PAMIAFPB_00148	8.55e-64	-	-	-	S	-	-	-	MerR HTH family regulatory protein
PAMIAFPB_00149	9.63e-61	-	-	-	S	-	-	-	Domain of unknown function, B. Theta Gene description (DUF3876)
PAMIAFPB_00150	6.04e-65	-	-	-	K	-	-	-	Helix-turn-helix domain
PAMIAFPB_00151	1.37e-64	-	-	-	K	-	-	-	transcriptional regulator (AraC family)
PAMIAFPB_00152	1.87e-109	-	-	-	K	-	-	-	acetyltransferase
PAMIAFPB_00153	9.52e-144	-	-	-	H	-	-	-	Methyltransferase domain
PAMIAFPB_00154	4.18e-18	-	-	-	-	-	-	-	-
PAMIAFPB_00155	2.3e-65	-	-	-	S	-	-	-	Helix-turn-helix domain
PAMIAFPB_00157	1.07e-124	-	-	-	-	-	-	-	-
PAMIAFPB_00158	9.21e-172	-	-	-	-	-	-	-	-
PAMIAFPB_00159	4.62e-113	-	-	-	T	-	-	-	Nacht domain
PAMIAFPB_00160	5.11e-105	-	-	-	S	-	-	-	Region found in RelA / SpoT proteins
PAMIAFPB_00161	3.14e-176	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_00162	1.36e-169	-	-	-	-	-	-	-	-
PAMIAFPB_00163	7.25e-88	-	-	-	K	-	-	-	Helix-turn-helix domain
PAMIAFPB_00164	1.82e-80	-	-	-	K	-	-	-	Helix-turn-helix domain
PAMIAFPB_00165	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_00166	0.0	-	-	-	E	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_00167	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_00168	0.0	-	-	-	E	ko:K21572	-	ko00000,ko02000	Pfam:SusD
PAMIAFPB_00170	1.09e-85	-	-	-	T	-	-	-	Cyclic nucleotide-binding domain protein
PAMIAFPB_00171	1.02e-282	-	-	-	I	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_00172	1.42e-47	-	-	-	S	-	-	-	Winged helix-turn-helix domain (DUF2582)
PAMIAFPB_00173	2e-224	-	-	-	MU	-	-	-	Efflux transporter, outer membrane factor
PAMIAFPB_00174	0.0	-	-	-	V	ko:K03296	-	ko00000	AcrB/AcrD/AcrF family
PAMIAFPB_00175	1e-187	-	-	-	M	ko:K03585	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMIAFPB_00176	5.21e-167	-	-	-	T	-	-	-	Histidine kinase
PAMIAFPB_00177	4.8e-115	-	-	-	K	-	-	-	LytTr DNA-binding domain
PAMIAFPB_00178	1.01e-140	-	-	-	O	-	-	-	Heat shock protein
PAMIAFPB_00179	7.45e-111	-	-	-	K	-	-	-	acetyltransferase
PAMIAFPB_00180	0.0	-	-	-	E	-	-	-	Domain of Unknown Function with PDB structure (DUF3858)
PAMIAFPB_00181	0.0	-	-	-	E	-	-	-	Domain of Unknown Function with PDB structure (DUF3857)
PAMIAFPB_00182	4.75e-99	-	-	-	K	-	-	-	Protein of unknown function (DUF3788)
PAMIAFPB_00183	1.02e-311	mepA_6	-	-	V	-	-	-	MATE efflux family protein
PAMIAFPB_00184	1.79e-235	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 28 family
PAMIAFPB_00185	1.89e-108	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 28 family
PAMIAFPB_00186	3.27e-138	-	-	-	S	-	-	-	Bacterial transferase hexapeptide (six repeats)
PAMIAFPB_00187	3.72e-145	vat_2	-	-	S	ko:K18234	-	ko00000,ko01000,ko01504	Bacterial transferase hexapeptide repeat protein
PAMIAFPB_00188	2.34e-207	-	2.1.1.266	-	S	ko:K07115	-	ko00000,ko01000,ko03009	COG COG2961 Protein involved in catabolism of external DNA
PAMIAFPB_00189	2.81e-106	lrp	-	-	K	ko:K03719,ko:K05800	-	ko00000,ko03000,ko03036	Transcriptional regulator, AsnC family
PAMIAFPB_00190	8.28e-310	metY	2.5.1.49	-	E	ko:K01740	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_00191	7.33e-50	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00192	2.82e-206	mscS	-	-	M	ko:K03442	-	ko00000,ko02000	Small-conductance mechanosensitive channel
PAMIAFPB_00193	0.0	-	-	-	P	ko:K02014	-	ko00000,ko02000	COG COG1629 Outer membrane receptor proteins, mostly Fe transport
PAMIAFPB_00194	0.0	-	-	-	T	-	-	-	Y_Y_Y domain
PAMIAFPB_00195	0.0	-	-	-	S	-	-	-	NHL repeat
PAMIAFPB_00196	0.0	-	-	-	P	-	-	-	TonB dependent receptor
PAMIAFPB_00197	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	Psort location OuterMembrane, score
PAMIAFPB_00198	2.96e-210	-	-	-	S	-	-	-	Domain of unknown function (DUF4361)
PAMIAFPB_00199	9.66e-138	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
PAMIAFPB_00200	5.51e-147	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Thiamine diphosphokinase
PAMIAFPB_00201	7.36e-139	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	COG COG2818 3-methyladenine DNA glycosylase
PAMIAFPB_00202	1.33e-313	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase
PAMIAFPB_00203	1.3e-167	-	5.4.2.12	-	G	ko:K15635	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	homoserine kinase
PAMIAFPB_00204	2.68e-104	-	5.4.2.12	-	G	ko:K15635	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	homoserine kinase
PAMIAFPB_00205	0.0	thrA	1.1.1.3, 2.7.2.4	-	E	ko:K12524	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
PAMIAFPB_00206	2.73e-241	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase, type I
PAMIAFPB_00207	4.28e-54	-	-	-	-	-	-	-	-
PAMIAFPB_00208	2.93e-90	-	-	-	S	-	-	-	AAA ATPase domain
PAMIAFPB_00209	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PAMIAFPB_00210	0.0	-	-	-	S	ko:K07137	-	ko00000	FAD-dependent
PAMIAFPB_00211	4.54e-138	-	-	-	K	-	-	-	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PAMIAFPB_00212	0.0	-	-	-	P	-	-	-	Outer membrane receptor
PAMIAFPB_00213	4.6e-122	-	-	-	K	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00214	2.57e-250	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_00215	0.0	prtQ	-	-	O	ko:K08303	ko05120,map05120	ko00000,ko00001,ko01000,ko01002	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00216	1.28e-228	metAA	2.3.1.46	-	E	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PAMIAFPB_00217	3.02e-21	-	-	-	C	-	-	-	4Fe-4S binding domain
PAMIAFPB_00218	5.97e-285	aspC	2.6.1.1	-	E	ko:K00812	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	COG0436 Aspartate tyrosine aromatic aminotransferase
PAMIAFPB_00219	3.66e-294	ribBA	3.5.4.25, 4.1.99.12	-	H	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PAMIAFPB_00220	0.0	-	-	-	S	ko:K07091	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Permease, YjgP YjgQ family
PAMIAFPB_00221	2.1e-88	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00223	6.75e-188	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
PAMIAFPB_00225	9.14e-188	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
PAMIAFPB_00226	3.02e-24	-	-	-	-	-	-	-	-
PAMIAFPB_00227	2.06e-238	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00229	3.02e-44	-	-	-	-	-	-	-	-
PAMIAFPB_00230	2.71e-54	-	-	-	-	-	-	-	-
PAMIAFPB_00231	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00232	2.27e-228	-	-	-	E	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00233	4.88e-72	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00234	1.86e-142	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00235	3.83e-129	aslA	-	-	P	-	-	-	Sulfatase
PAMIAFPB_00236	9.35e-284	-	3.2.1.45	GH30	G	ko:K01201	ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 30 family
PAMIAFPB_00238	3.45e-123	-	-	-	M	-	-	-	Spi protease inhibitor
PAMIAFPB_00239	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_00240	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_00241	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_00242	0.0	-	-	-	H	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_00243	1.09e-174	-	-	-	O	-	-	-	Glycosyl Hydrolase Family 88
PAMIAFPB_00244	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_00247	1.61e-38	-	-	-	K	-	-	-	Sigma-70, region 4
PAMIAFPB_00248	1.38e-81	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PAMIAFPB_00249	0.0	-	-	-	P	-	-	-	TonB-dependent Receptor Plug Domain
PAMIAFPB_00250	3.5e-184	-	-	-	P	ko:K21572	-	ko00000,ko02000	RagB SusD domain protein
PAMIAFPB_00251	6.12e-116	-	-	-	M	-	-	-	Domain of unknown function (DUF3472)
PAMIAFPB_00252	6.56e-23	-	-	-	S	-	-	-	Fibrobacter succinogenes major domain (Fib_succ_major)
PAMIAFPB_00253	2.45e-275	-	-	-	G	-	-	-	Domain of Unknown Function (DUF1080)
PAMIAFPB_00254	6.89e-266	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PAMIAFPB_00255	0.0	-	-	-	C	-	-	-	Domain of Unknown Function (DUF1080)
PAMIAFPB_00256	9.97e-190	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PAMIAFPB_00257	2.67e-59	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PAMIAFPB_00258	1.17e-109	-	-	-	L	-	-	-	Transposase, Mutator family
PAMIAFPB_00260	4.13e-77	-	-	-	S	-	-	-	TIR domain
PAMIAFPB_00261	6.83e-09	-	-	-	KT	-	-	-	AAA domain
PAMIAFPB_00263	0.0	-	-	-	-	ko:K02316,ko:K06919	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	-
PAMIAFPB_00264	1.2e-85	-	-	-	S	-	-	-	Domain of unknown function (DUF4906)
PAMIAFPB_00265	1.06e-265	-	-	-	S	-	-	-	Domain of unknown function (DUF4906)
PAMIAFPB_00266	4.24e-71	dam	2.1.1.72	-	H	ko:K06223	ko03430,map03430	ko00000,ko00001,ko01000,ko02048,ko03032,ko03400	COG0338 Site-specific DNA methylase
PAMIAFPB_00268	7.84e-286	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase superfamily domain
PAMIAFPB_00269	3.76e-255	-	-	-	Q	-	-	-	FAD dependent oxidoreductase
PAMIAFPB_00270	2.74e-126	-	-	-	Q	-	-	-	FAD dependent oxidoreductase
PAMIAFPB_00271	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain protein
PAMIAFPB_00272	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_00273	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_00274	1.76e-230	-	-	-	PT	-	-	-	Sigma factor regulatory protein, FecR PupR family
PAMIAFPB_00275	7.92e-129	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
PAMIAFPB_00276	7.38e-69	yeeR	1.3.1.71, 2.1.1.334	-	O	ko:K00223,ko:K21310	ko00100,ko00920,ko01100,ko01130,map00100,map00920,map01100,map01130	ko00000,ko00001,ko00002,ko01000	methyltransferase activity
PAMIAFPB_00277	5.09e-47	-	-	-	S	-	-	-	Domain of unknown function (DUF3944)
PAMIAFPB_00281	3.07e-23	-	-	-	-	-	-	-	-
PAMIAFPB_00282	5.61e-50	-	-	-	-	-	-	-	-
PAMIAFPB_00283	6.59e-81	-	-	-	-	-	-	-	-
PAMIAFPB_00284	2.2e-133	-	-	-	-	-	-	-	-
PAMIAFPB_00285	2.86e-12	-	-	-	-	-	-	-	-
PAMIAFPB_00289	1.15e-28	-	-	-	IQ	-	-	-	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol
PAMIAFPB_00291	2.89e-09	-	-	-	C	-	-	-	Radical SAM
PAMIAFPB_00292	0.0	-	-	-	DM	-	-	-	Chain length determinant protein
PAMIAFPB_00293	1.54e-171	-	-	-	M	ko:K01991	ko02026,map02026	ko00000,ko00001,ko02000	COG1596 Periplasmic protein involved in polysaccharide export
PAMIAFPB_00295	6.01e-13	-	-	-	-	-	-	-	-
PAMIAFPB_00296	1.97e-31	-	-	-	-	-	-	-	-
PAMIAFPB_00298	5.16e-103	-	-	-	G	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00299	2.5e-161	-	-	-	S	-	-	-	GlcNAc-PI de-N-acetylase
PAMIAFPB_00300	2.29e-144	-	-	-	M	-	-	-	Bacterial sugar transferase
PAMIAFPB_00301	2.97e-91	-	-	-	S	-	-	-	ATP-grasp domain
PAMIAFPB_00303	4.12e-86	-	-	-	M	-	-	-	Glycosyl transferases group 1
PAMIAFPB_00304	7.12e-61	-	-	-	S	-	-	-	Bacterial transferase hexapeptide (six repeats)
PAMIAFPB_00305	2.8e-109	wcfG	-	-	M	-	-	-	Glycosyl transferases group 1
PAMIAFPB_00306	3.18e-23	-	-	-	S	-	-	-	Sugar-transfer associated ATP-grasp
PAMIAFPB_00307	2.25e-37	-	-	-	M	-	-	-	TupA-like ATPgrasp
PAMIAFPB_00308	8.58e-80	-	-	-	M	-	-	-	Glycosyl transferase, family 2
PAMIAFPB_00311	1.44e-127	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_00313	7.5e-232	fnlA	5.1.3.2	-	M	ko:K17716	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Polysaccharide biosynthesis protein
PAMIAFPB_00314	9.58e-270	-	1.1.1.367	-	GM	ko:K19068	-	ko00000,ko01000	NAD dependent epimerase dehydratase family
PAMIAFPB_00315	1.09e-256	-	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	UDP-N-acetylglucosamine 2-epimerase
PAMIAFPB_00316	8.36e-281	ugd	1.1.1.22	-	C	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PAMIAFPB_00317	0.0	wbpM	-	-	GM	-	-	-	Polysaccharide biosynthesis protein
PAMIAFPB_00318	1.97e-130	-	-	-	K	-	-	-	Transcription termination factor nusG
PAMIAFPB_00319	2.13e-276	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_00320	1.12e-99	-	-	-	L	-	-	-	DNA photolyase activity
PAMIAFPB_00321	3.14e-72	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PAMIAFPB_00322	5.65e-205	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PAMIAFPB_00324	0.0	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
PAMIAFPB_00326	7.79e-189	-	-	-	-	-	-	-	-
PAMIAFPB_00327	2.34e-286	-	-	-	L	-	-	-	transposase, IS4
PAMIAFPB_00330	3.5e-141	-	-	-	S	-	-	-	VirE N-terminal domain
PAMIAFPB_00331	0.0	-	-	-	-	-	-	-	-
PAMIAFPB_00333	1.61e-293	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PAMIAFPB_00334	0.0	-	-	-	H	-	-	-	Protein of unknown function (DUF3987)
PAMIAFPB_00335	1.93e-24	-	-	-	-	-	-	-	-
PAMIAFPB_00336	2.23e-32	-	-	-	S	-	-	-	Lipocalin-like domain
PAMIAFPB_00338	4.6e-09	-	-	-	-	-	-	-	-
PAMIAFPB_00339	2.97e-136	-	-	-	L	-	-	-	Phage integrase family
PAMIAFPB_00340	3.63e-247	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00341	3.5e-130	-	-	-	-	-	-	-	-
PAMIAFPB_00342	2.18e-24	-	-	-	-	-	-	-	-
PAMIAFPB_00343	5.01e-36	-	-	-	-	-	-	-	-
PAMIAFPB_00344	5.08e-254	-	-	-	JKL	-	-	-	Belongs to the DEAD box helicase family
PAMIAFPB_00345	4.63e-40	-	-	-	-	-	-	-	-
PAMIAFPB_00346	3.37e-49	-	-	-	-	-	-	-	-
PAMIAFPB_00347	4.47e-203	-	-	-	L	-	-	-	Arm DNA-binding domain
PAMIAFPB_00348	0.0	-	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Psort location Cytoplasmic, score
PAMIAFPB_00349	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_00350	1.58e-263	kdpD	2.7.13.3	-	T	ko:K07646	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00351	5.46e-181	-	-	-	S	-	-	-	COG NOG26951 non supervised orthologous group
PAMIAFPB_00352	8.25e-131	kdpC	3.6.3.12	-	P	ko:K01548	ko02020,map02020	ko00000,ko00001,ko01000	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
PAMIAFPB_00353	0.0	kdpB	3.6.3.12	-	P	ko:K01547	ko02020,map02020	ko00000,ko00001,ko01000	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
PAMIAFPB_00354	0.0	kdpA	3.6.3.12	-	P	ko:K01546	ko02020,map02020	ko00000,ko00001,ko01000	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
PAMIAFPB_00357	4.2e-117	-	1.16.3.1	-	S	ko:K03594	ko00860,map00860	ko00000,ko00001,ko01000	Ferritin-like domain
PAMIAFPB_00358	8.66e-113	-	-	-	-	-	-	-	-
PAMIAFPB_00359	1.02e-231	metF	1.5.1.20	-	C	ko:K00297	ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_00360	2.56e-272	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	COG2812 DNA polymerase III gamma tau subunits
PAMIAFPB_00361	1.09e-274	yaaT	-	-	S	-	-	-	PSP1 C-terminal domain protein
PAMIAFPB_00362	2.3e-102	gldH	-	-	S	-	-	-	Gliding motility-associated lipoprotein GldH
PAMIAFPB_00363	0.0	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
PAMIAFPB_00364	0.0	mrdA	3.4.16.4	-	M	ko:K05515	ko00550,ko01501,map00550,map01501	ko00000,ko00001,ko01000,ko01011	penicillin-binding protein 2
PAMIAFPB_00365	9.96e-109	mreD	-	-	S	-	-	-	rod shape-determining protein MreD
PAMIAFPB_00366	2.49e-193	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
PAMIAFPB_00367	5.31e-241	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein, MreB Mrl family
PAMIAFPB_00368	0.0	purH	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	bifunctional purine biosynthesis protein PurH
PAMIAFPB_00369	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
PAMIAFPB_00370	0.0	-	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
PAMIAFPB_00371	8.65e-226	-	-	-	JM	-	-	-	COG NOG09722 non supervised orthologous group
PAMIAFPB_00372	0.0	-	-	-	M	-	-	-	Outer membrane protein, OMP85 family
PAMIAFPB_00373	0.0	-	-	-	S	-	-	-	Psort location OuterMembrane, score 9.49
PAMIAFPB_00374	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_00375	0.0	norM	-	-	V	ko:K03327	-	ko00000,ko02000	MATE efflux family protein
PAMIAFPB_00376	1.83e-298	-	-	-	S	ko:K07263	-	ko00000,ko01000,ko01002	Peptidase M16 inactive domain protein
PAMIAFPB_00377	1.35e-201	-	5.2.1.8	-	M	ko:K01802,ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PAMIAFPB_00378	8.19e-316	-	-	-	T	ko:K07713	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains
PAMIAFPB_00379	2.34e-122	-	-	-	T	-	-	-	cheY-homologous receiver domain
PAMIAFPB_00380	0.0	-	-	-	T	-	-	-	cheY-homologous receiver domain
PAMIAFPB_00381	0.0	-	-	-	P	-	-	-	COG COG3119 Arylsulfatase A and related enzymes
PAMIAFPB_00382	0.0	-	-	-	G	-	-	-	Alpha-L-fucosidase
PAMIAFPB_00383	0.0	-	-	-	G	-	-	-	Raffinose synthase or seed imbibition protein Sip1
PAMIAFPB_00384	0.0	-	-	-	P	-	-	-	COG COG3119 Arylsulfatase A and related enzymes
PAMIAFPB_00386	4.42e-33	-	-	-	-	-	-	-	-
PAMIAFPB_00387	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 76
PAMIAFPB_00388	0.0	-	-	-	S	-	-	-	Concanavalin A-like lectin/glucanases superfamily
PAMIAFPB_00389	1.9e-179	-	-	-	S	-	-	-	Domain of unknown function (DUF4361)
PAMIAFPB_00390	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	non supervised orthologous group
PAMIAFPB_00391	0.0	-	-	-	P	-	-	-	TonB dependent receptor
PAMIAFPB_00392	3.2e-297	-	-	-	S	-	-	-	IPT/TIG domain
PAMIAFPB_00393	0.0	-	-	-	T	-	-	-	Response regulator receiver domain protein
PAMIAFPB_00394	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
PAMIAFPB_00395	8.8e-241	-	-	-	S	-	-	-	Endonuclease Exonuclease phosphatase family
PAMIAFPB_00396	1.55e-300	-	-	-	G	-	-	-	Glycosyl hydrolase family 76
PAMIAFPB_00397	0.0	-	-	-	S	ko:K09704	-	ko00000	Conserved protein
PAMIAFPB_00398	1.8e-297	-	3.2.1.197	-	G	ko:K21065	-	ko00000,ko01000	beta-1,4-mannooligosaccharide phosphorylase
PAMIAFPB_00399	0.0	-	-	-	-	-	-	-	-
PAMIAFPB_00400	9.31e-191	-	3.1.3.6, 3.1.4.16	-	M	ko:K01119,ko:K02450,ko:K14197	ko00230,ko00240,ko05150,map00230,map00240,map05150	ko00000,ko00001,ko00002,ko01000,ko02044	LysM domain
PAMIAFPB_00402	3.58e-183	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
PAMIAFPB_00403	5.5e-169	-	-	-	M	-	-	-	pathogenesis
PAMIAFPB_00405	0.0	-	3.2.1.24	GH38	G	ko:K01191	ko00511,map00511	ko00000,ko00001,ko01000,ko04131	Glycosyl hydrolase family 38 C-terminal domain protein
PAMIAFPB_00406	0.0	-	-	-	G	-	-	-	Alpha-1,2-mannosidase
PAMIAFPB_00407	2.15e-161	rluC	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	ribosomal pseudouridine synthase C, large subunit
PAMIAFPB_00408	3.5e-168	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	with different specificities (related to short-chain alcohol
PAMIAFPB_00409	3.21e-136	qacR	-	-	K	-	-	-	transcriptional regulator, TetR family
PAMIAFPB_00411	2.76e-84	-	-	-	S	-	-	-	Domain of unknown function (DUF4890)
PAMIAFPB_00412	6.27e-217	-	-	-	K	-	-	-	Psort location Cytoplasmic, score 9.26
PAMIAFPB_00413	2.78e-272	fucO	1.1.1.77	-	C	ko:K00048	ko00630,ko00640,ko01120,map00630,map00640,map01120	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_00414	4.03e-198	rhaD	4.1.2.19	-	G	ko:K01629	ko00040,ko00051,ko01120,map00040,map00051,map01120	ko00000,ko00001,ko01000	COG COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
PAMIAFPB_00415	9.91e-241	rhaT	-	-	EG	ko:K02856	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_00416	1e-314	rhaA	5.3.1.14	-	G	ko:K01813	ko00051,ko01120,map00051,map01120	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00417	0.0	rhaB	2.7.1.5, 2.7.1.51	-	G	ko:K00848,ko:K00879	ko00040,ko00051,ko01120,map00040,map00051,map01120	ko00000,ko00001,ko01000	Involved in the catabolism of L-rhamnose (6-deoxy-L- mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate
PAMIAFPB_00418	3.5e-11	-	-	-	-	-	-	-	-
PAMIAFPB_00419	1.89e-100	argR	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
PAMIAFPB_00420	1.04e-139	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PAMIAFPB_00421	5.19e-293	argG	6.3.4.5	-	E	ko:K01940	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418	ko00000,ko00001,ko00002,ko01000,ko04147	argininosuccinate synthase
PAMIAFPB_00422	6.94e-237	argC	1.2.1.38	-	E	ko:K00145	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PAMIAFPB_00423	4.1e-273	argD	2.6.1.11, 2.6.1.17	-	E	ko:K00821	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PAMIAFPB_00424	3.23e-173	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PAMIAFPB_00425	7.68e-129	-	-	-	K	-	-	-	Cupin domain protein
PAMIAFPB_00426	0.0	acsA	6.2.1.1, 6.2.1.32	-	I	ko:K01895,ko:K08295	ko00010,ko00620,ko00627,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00627,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko01004	Psort location Cytoplasmic, score
PAMIAFPB_00427	2.78e-294	-	-	-	NU	-	-	-	bacterial-type flagellum-dependent cell motility
PAMIAFPB_00428	1.39e-286	-	-	-	G	-	-	-	Putative glycoside hydrolase Family 18, chitinase_18
PAMIAFPB_00429	0.0	-	-	-	S	-	-	-	non supervised orthologous group
PAMIAFPB_00430	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_00431	6.57e-226	-	-	-	PT	-	-	-	Sigma factor regulatory protein, FecR PupR family
PAMIAFPB_00432	7.99e-120	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor, Bacteroides expansion family 1
PAMIAFPB_00433	5.79e-39	-	-	-	-	-	-	-	-
PAMIAFPB_00434	1.2e-91	-	-	-	-	-	-	-	-
PAMIAFPB_00436	7.24e-263	-	-	-	S	-	-	-	non supervised orthologous group
PAMIAFPB_00437	5.71e-194	-	-	-	S	-	-	-	COG NOG19137 non supervised orthologous group
PAMIAFPB_00438	1.69e-296	-	-	-	L	-	-	-	Transposase IS66 family
PAMIAFPB_00439	5.14e-71	-	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 like protein
PAMIAFPB_00440	8.52e-83	-	-	-	L	ko:K07497	-	ko00000	transposase activity
PAMIAFPB_00441	1.95e-182	-	-	-	S	-	-	-	COG NOG26374 non supervised orthologous group
PAMIAFPB_00442	5.91e-49	-	-	-	S	-	-	-	Calycin-like beta-barrel domain
PAMIAFPB_00443	4.14e-242	-	-	-	S	-	-	-	Calycin-like beta-barrel domain
PAMIAFPB_00445	0.0	-	-	-	S	-	-	-	amine dehydrogenase activity
PAMIAFPB_00446	0.0	-	-	-	S	-	-	-	Fibrobacter succinogenes major domain (Fib_succ_major)
PAMIAFPB_00447	0.0	-	-	-	P	ko:K14445	-	ko00000,ko02000	Citrate transporter
PAMIAFPB_00448	9.45e-117	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_00449	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_00450	1.88e-27	-	-	-	-	-	-	-	-
PAMIAFPB_00451	3.06e-181	-	-	-	-	-	-	-	-
PAMIAFPB_00455	0.000184	-	-	-	KLT	-	-	-	PFAM KWG Leptospira repeat protein
PAMIAFPB_00457	6.94e-126	-	-	-	L	-	-	-	Phage integrase family
PAMIAFPB_00458	6.98e-23	-	-	-	K	-	-	-	Helix-turn-helix domain
PAMIAFPB_00459	4.94e-134	-	-	-	KT	-	-	-	AAA domain
PAMIAFPB_00460	7.62e-25	-	-	-	-	-	-	-	-
PAMIAFPB_00463	0.0	argH	4.3.2.1	-	E	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Psort location Cytoplasmic, score
PAMIAFPB_00464	2.53e-88	-	-	-	S	-	-	-	Polyketide cyclase / dehydrase and lipid transport
PAMIAFPB_00465	2.15e-151	pyrE	2.4.2.10, 4.1.1.23	-	F	ko:K00762,ko:K13421	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PAMIAFPB_00466	4.11e-110	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Modulates RecA activity
PAMIAFPB_00467	4.01e-198	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PAMIAFPB_00468	2.7e-251	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PAMIAFPB_00469	0.0	-	-	-	G	-	-	-	COG NOG27066 non supervised orthologous group
PAMIAFPB_00470	1.57e-178	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PAMIAFPB_00471	0.0	yaeT	-	-	M	ko:K07277	-	ko00000,ko02000,ko03029	Outer membrane protein assembly complex, YaeT protein
PAMIAFPB_00472	5.16e-172	-	-	-	-	-	-	-	-
PAMIAFPB_00473	4.31e-106	ompH	-	-	M	ko:K06142	-	ko00000	membrane
PAMIAFPB_00474	4.45e-89	ompH	-	-	M	ko:K06142	-	ko00000	membrane
PAMIAFPB_00475	6.46e-205	murI	5.1.1.3	-	M	ko:K01776	ko00471,ko01100,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
PAMIAFPB_00476	2.5e-47	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00477	1.21e-273	-	-	-	E	-	-	-	DegT/DnrJ/EryC1/StrS aminotransferase family
PAMIAFPB_00478	8.7e-257	proB	2.7.2.11	-	E	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PAMIAFPB_00479	2.71e-298	proA	1.2.1.41	-	E	ko:K00147	ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PAMIAFPB_00480	1.4e-234	argF	2.1.3.11, 2.1.3.9	-	E	ko:K09065,ko:K13043	ko00220,ko01100,ko01230,map00220,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
PAMIAFPB_00481	2.12e-84	glpE	-	-	P	-	-	-	Rhodanese-like protein
PAMIAFPB_00482	3.69e-169	-	-	-	S	-	-	-	COG NOG31798 non supervised orthologous group
PAMIAFPB_00483	2.12e-275	-	-	-	I	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00484	6.81e-158	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
PAMIAFPB_00485	2.43e-266	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PAMIAFPB_00486	8.65e-144	spk1	2.7.11.1, 6.3.2.4	-	S	ko:K01921,ko:K08884,ko:K12132	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01001,ko01011	PASTA domain protein
PAMIAFPB_00487	8.16e-29	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
PAMIAFPB_00488	2.28e-132	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PAMIAFPB_00489	0.0	-	3.1.3.1	-	P	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	Belongs to the alkaline phosphatase family
PAMIAFPB_00490	0.0	-	-	-	S	ko:K21557	-	ko00000,ko03000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00491	0.0	-	3.2.1.135	GH13	G	ko:K21575	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 13 family
PAMIAFPB_00492	0.0	susB	3.2.1.20, 3.2.1.3	GH31,GH97	G	ko:K01187,ko:K21574	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	COG NOG06228 non supervised orthologous group
PAMIAFPB_00493	0.0	-	-	-	HP	ko:K21573	-	ko00000,ko02000	TonB dependent receptor
PAMIAFPB_00494	0.0	susD	-	-	M	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_00495	2.34e-286	-	-	-	S	ko:K21571	-	ko00000	Outer membrane protein SusF_SusE
PAMIAFPB_00496	0.0	-	-	-	S	ko:K21571	-	ko00000	Domain of unknown function (DUF5115)
PAMIAFPB_00497	0.0	-	3.2.1.1, 3.2.1.133, 3.2.1.135, 3.2.1.54	GH13	M	ko:K01176,ko:K01208	ko00500,ko01100,ko04973,map00500,map01100,map04973	ko00000,ko00001,ko01000	Alpha-amylase domain
PAMIAFPB_00498	5.5e-193	lpxH	3.6.1.54	-	S	ko:K03269	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Psort location Cytoplasmic, score
PAMIAFPB_00499	7.08e-68	yitW	-	-	S	-	-	-	FeS assembly SUF system protein
PAMIAFPB_00500	1.02e-163	radC	-	-	E	ko:K03630	-	ko00000	Belongs to the UPF0758 family
PAMIAFPB_00501	2.21e-295	-	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score 9.46
PAMIAFPB_00502	8.87e-288	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAMIAFPB_00503	6.41e-237	pta	2.3.1.8	-	C	ko:K00625,ko:K13788	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_00504	1.93e-70	lrgA	-	-	S	ko:K06518	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score
PAMIAFPB_00505	5.97e-147	lrgB	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_00506	1.34e-230	-	-	-	S	ko:K01163	-	ko00000	Conserved protein
PAMIAFPB_00507	6.78e-248	-	-	-	S	-	-	-	acetyltransferase involved in intracellular survival and related
PAMIAFPB_00508	2.45e-294	-	-	-	E	-	-	-	Glycosyl Hydrolase Family 88
PAMIAFPB_00509	0.0	-	-	-	S	-	-	-	COG NOG19133 non supervised orthologous group
PAMIAFPB_00510	5.11e-267	-	-	-	G	-	-	-	Glycosyl hydrolases family 43
PAMIAFPB_00511	0.0	-	-	-	G	-	-	-	Glycosyl hydrolases family 43
PAMIAFPB_00512	2.45e-212	-	-	-	S	-	-	-	Domain of unknown function (DUF4361)
PAMIAFPB_00513	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	Psort location OuterMembrane, score
PAMIAFPB_00514	0.0	-	-	-	H	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_00515	0.0	-	-	-	S	-	-	-	amine dehydrogenase activity
PAMIAFPB_00519	0.0	-	-	-	T	-	-	-	adenylate cyclase carring two-component hybrid sensor and regulator domains
PAMIAFPB_00520	0.0	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2264)
PAMIAFPB_00521	0.0	-	-	-	N	-	-	-	BNR repeat-containing family member
PAMIAFPB_00522	4.11e-255	-	-	-	G	-	-	-	hydrolase, family 43
PAMIAFPB_00523	0.0	-	-	-	S	ko:K09955	-	ko00000	protein conserved in bacteria
PAMIAFPB_00524	2.73e-203	-	-	-	M	-	-	-	Domain of unknown function (DUF4488)
PAMIAFPB_00525	8.04e-230	-	-	-	S	-	-	-	Domain of unknown function (DUF4361)
PAMIAFPB_00526	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	Psort location OuterMembrane, score
PAMIAFPB_00527	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_00528	8.99e-144	-	-	-	CO	-	-	-	amine dehydrogenase activity
PAMIAFPB_00529	6.12e-197	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PAMIAFPB_00530	1.28e-89	-	5.1.3.32	-	G	ko:K03534	-	ko00000,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00531	0.0	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	Alpha-L-fucosidase
PAMIAFPB_00532	0.0	-	-	-	G	-	-	-	Glycosyl-hydrolase 97 C-terminal, oligomerisation
PAMIAFPB_00533	0.0	-	-	-	G	-	-	-	Glycosyl hydrolases family 43
PAMIAFPB_00534	0.0	-	-	-	G	-	-	-	F5/8 type C domain
PAMIAFPB_00535	0.0	-	-	-	G	-	-	-	COG NOG26813 non supervised orthologous group
PAMIAFPB_00536	0.0	-	-	-	KT	-	-	-	Y_Y_Y domain
PAMIAFPB_00537	0.0	-	3.2.1.177	GH31	G	ko:K01811	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 31 family
PAMIAFPB_00538	2.55e-180	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00539	1.05e-36	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00540	0.0	-	-	-	G	-	-	-	Carbohydrate binding domain protein
PAMIAFPB_00541	0.0	-	-	-	G	-	-	-	Glycosyl hydrolases family 43
PAMIAFPB_00542	4.92e-242	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 43 family
PAMIAFPB_00543	0.0	-	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 35 family
PAMIAFPB_00544	1.27e-129	-	-	-	-	-	-	-	-
PAMIAFPB_00545	7.51e-195	-	-	-	S	-	-	-	Protein of unknown function (DUF1266)
PAMIAFPB_00546	1.88e-214	-	-	-	S	-	-	-	Protein of unknown function (DUF3137)
PAMIAFPB_00547	8.25e-125	-	-	-	S	ko:K03744	-	ko00000	LemA family
PAMIAFPB_00548	3.12e-315	tldD3	-	-	S	ko:K03592	-	ko00000,ko01002	Psort location Cytoplasmic, score 9.26
PAMIAFPB_00549	0.0	tldD1	-	-	S	ko:K03568	-	ko00000,ko01002	and their inactivated homologs
PAMIAFPB_00550	5.55e-168	dacA	-	-	S	-	-	-	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PAMIAFPB_00551	1.58e-204	folP	2.5.1.15	-	H	ko:K00796	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00552	0.0	-	-	-	T	-	-	-	histidine kinase DNA gyrase B
PAMIAFPB_00553	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PAMIAFPB_00554	1.09e-95	fjo27	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
PAMIAFPB_00555	0.0	-	-	-	P	ko:K03308	-	ko00000	Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
PAMIAFPB_00556	1.53e-213	comEA	-	-	L	-	-	-	COG COG1555 DNA uptake protein and related DNA-binding proteins
PAMIAFPB_00557	2.4e-151	lolD	-	-	V	ko:K09810	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner
PAMIAFPB_00558	1.1e-166	hypB	-	-	H	ko:K22132	-	ko00000,ko03016	involved in molybdopterin and thiamine biosynthesis family 1
PAMIAFPB_00559	0.0	-	-	-	PT	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_00560	0.0	-	-	-	H	-	-	-	COG NOG08812 non supervised orthologous group
PAMIAFPB_00561	3.45e-239	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PAMIAFPB_00562	0.0	-	-	-	P	-	-	-	COG NOG11715 non supervised orthologous group
PAMIAFPB_00563	6.99e-307	-	-	-	S	-	-	-	Protein of unknown function (DUF4876)
PAMIAFPB_00564	0.0	-	-	-	-	-	-	-	-
PAMIAFPB_00565	0.0	-	-	-	S	-	-	-	Fibrobacter succinogenes major domain (Fib_succ_major)
PAMIAFPB_00566	3.16e-122	-	-	-	-	-	-	-	-
PAMIAFPB_00567	1.61e-132	-	-	-	S	ko:K09939	-	ko00000	Putative PepSY_TM-like
PAMIAFPB_00568	3.1e-215	-	-	-	V	ko:K01990,ko:K19340	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1131 ABC-type multidrug transport system ATPase component
PAMIAFPB_00569	6.87e-153	-	-	-	-	-	-	-	-
PAMIAFPB_00570	7.71e-174	-	-	-	S	-	-	-	Domain of unknown function (DUF4857)
PAMIAFPB_00571	3.05e-54	-	-	-	S	-	-	-	Domain of unknown function (DUF4857)
PAMIAFPB_00572	7.47e-298	-	-	-	S	-	-	-	Lamin Tail Domain
PAMIAFPB_00573	0.0	-	-	-	E	-	-	-	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PAMIAFPB_00574	0.0	-	-	-	M	-	-	-	Glycosyltransferase, group 2 family protein
PAMIAFPB_00575	0.0	lytB	-	-	D	ko:K06381	-	ko00000	SpoIID LytB domain protein
PAMIAFPB_00576	1.41e-54	-	-	-	EGP	ko:K08218	ko01501,map01501	ko00000,ko00001,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_00577	3.63e-232	-	-	-	EGP	ko:K08218	ko01501,map01501	ko00000,ko00001,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_00578	1.17e-267	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_00579	6.43e-202	-	-	-	G	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00580	4.9e-185	yjmD_1	-	-	E	-	-	-	Psort location Cytoplasmic, score 9.97
PAMIAFPB_00581	2.73e-303	fucP	-	-	G	ko:K02429	-	ko00000,ko02000	L-fucose H symporter permease
PAMIAFPB_00582	1.88e-222	-	-	-	S	ko:K07045	-	ko00000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00583	5.21e-226	fdh	1.1.1.122	-	C	ko:K00064	ko00051,ko00053,ko01100,ko01110,ko01120,map00051,map00053,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Oxidoreductase, aldo keto reductase family protein
PAMIAFPB_00584	6.63e-241	-	-	-	K	ko:K02529	-	ko00000,ko03000	Psort location Cytoplasmic, score 9.97
PAMIAFPB_00585	6.91e-149	-	-	-	S	-	-	-	Tetratricopeptide repeats
PAMIAFPB_00587	3.33e-43	-	-	-	O	-	-	-	Thioredoxin
PAMIAFPB_00588	1.48e-99	-	-	-	-	-	-	-	-
PAMIAFPB_00589	5.62e-84	-	5.2.1.8	-	M	ko:K01802,ko:K03773	-	ko00000,ko01000,ko03110	FkbP-type peptidyl-prolyl cis-trans
PAMIAFPB_00590	0.0	glyQS	6.1.1.14	-	J	ko:K01880	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of glycine to tRNA(Gly)
PAMIAFPB_00591	2.22e-103	-	-	-	L	-	-	-	DNA-binding protein
PAMIAFPB_00592	2.42e-285	-	-	-	K	ko:K02529	-	ko00000,ko03000	transcriptional regulator (AraC family)
PAMIAFPB_00593	9.07e-307	-	-	-	Q	-	-	-	Dienelactone hydrolase
PAMIAFPB_00594	1.43e-278	-	-	-	S	-	-	-	Domain of unknown function (DUF5109)
PAMIAFPB_00595	0.0	araE	-	-	P	ko:K08138,ko:K08139	ko04113,map04113	ko00000,ko00001,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PAMIAFPB_00596	3.04e-312	ce	5.1.3.8	-	G	ko:K01787	ko00520,map00520	ko00000,ko00001,ko01000	COG COG2942 N-acyl-D-glucosamine 2-epimerase
PAMIAFPB_00597	0.0	-	-	-	H	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_00598	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_00599	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF5018)
PAMIAFPB_00600	2.56e-248	-	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	SIS domain
PAMIAFPB_00601	2.17e-212	-	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
PAMIAFPB_00602	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 2 family
PAMIAFPB_00603	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain
PAMIAFPB_00604	0.0	-	3.1.1.53	-	G	ko:K05970	-	ko00000,ko01000	COG NOG04984 non supervised orthologous group
PAMIAFPB_00605	0.0	-	-	-	-	-	-	-	-
PAMIAFPB_00606	0.0	-	-	-	G	-	-	-	hydrolase activity, acting on glycosyl bonds
PAMIAFPB_00607	0.0	-	-	-	G	-	-	-	Phosphodiester glycosidase
PAMIAFPB_00608	6.98e-21	-	-	-	E	-	-	-	COG NOG09493 non supervised orthologous group
PAMIAFPB_00609	3.02e-301	-	-	-	C	-	-	-	Domain of unknown function (DUF4855)
PAMIAFPB_00610	0.0	-	3.2.1.50	-	G	ko:K01205	ko00531,ko01100,ko04142,map00531,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko04147	Alpha-N-acetylglucosaminidase
PAMIAFPB_00611	4.65e-312	-	-	-	G	ko:K02429	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_00612	4.2e-284	-	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
PAMIAFPB_00613	1.64e-193	-	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
PAMIAFPB_00614	6.71e-241	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PAMIAFPB_00615	0.0	-	-	-	S	-	-	-	Putative oxidoreductase C terminal domain
PAMIAFPB_00616	1.41e-178	-	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PAMIAFPB_00617	0.0	-	-	-	S	-	-	-	Oxidoreductase family, C-terminal alpha/beta domain
PAMIAFPB_00618	1.96e-45	-	-	-	-	-	-	-	-
PAMIAFPB_00619	0.0	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PAMIAFPB_00620	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	COG0188 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) A subunit
PAMIAFPB_00621	8.2e-211	-	-	-	S	-	-	-	COG NOG19130 non supervised orthologous group
PAMIAFPB_00622	2.04e-254	-	-	-	M	-	-	-	peptidase S41
PAMIAFPB_00624	5.8e-216	-	-	-	G	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00627	5.93e-155	-	-	-	-	-	-	-	-
PAMIAFPB_00631	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeats
PAMIAFPB_00632	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_00633	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	COG NOG26302 non supervised orthologous group
PAMIAFPB_00634	0.0	-	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	glycosyl hydrolase, family 3
PAMIAFPB_00635	0.0	-	-	-	S	-	-	-	protein conserved in bacteria
PAMIAFPB_00636	0.0	-	-	-	M	-	-	-	TonB-dependent receptor
PAMIAFPB_00637	6.5e-81	-	-	-	-	-	-	-	-
PAMIAFPB_00638	2.5e-246	-	-	-	-	-	-	-	-
PAMIAFPB_00639	1.01e-203	-	-	-	F	ko:K01173	ko04210,map04210	ko00000,ko00001,ko03029	DNA/RNA non-specific endonuclease
PAMIAFPB_00640	4.21e-224	-	-	-	S	-	-	-	Endonuclease Exonuclease phosphatase family
PAMIAFPB_00641	0.0	-	-	-	P	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_00642	4.44e-140	-	-	-	P	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_00643	1.62e-189	-	-	-	-	-	-	-	-
PAMIAFPB_00644	4.63e-241	-	2.7.11.1	-	S	ko:K07154	-	ko00000,ko01000,ko01001,ko02048	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00645	1.98e-65	-	-	-	K	-	-	-	sequence-specific DNA binding
PAMIAFPB_00646	2.79e-293	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_00647	9.44e-109	cyaA	4.6.1.1	-	S	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00648	6.61e-256	-	-	-	P	-	-	-	phosphate-selective porin
PAMIAFPB_00649	2.39e-18	-	-	-	-	-	-	-	-
PAMIAFPB_00650	4.46e-227	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PAMIAFPB_00651	0.0	-	-	-	S	-	-	-	Peptidase M16 inactive domain
PAMIAFPB_00652	0.0	fadD	6.2.1.3	-	I	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	AMP-binding enzyme
PAMIAFPB_00653	1.45e-257	argE	3.5.1.16	-	E	ko:K01438	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related
PAMIAFPB_00654	5.2e-294	-	-	-	S	ko:K07133	-	ko00000	AAA domain
PAMIAFPB_00656	4.59e-38	-	-	-	-	-	-	-	-
PAMIAFPB_00657	1.61e-293	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PAMIAFPB_00658	2.66e-90	-	-	-	-	-	-	-	-
PAMIAFPB_00659	0.0	-	-	-	G	-	-	-	Domain of unknown function (DUF5127)
PAMIAFPB_00660	0.0	-	-	-	M	-	-	-	O-antigen ligase like membrane protein
PAMIAFPB_00662	3.84e-27	-	-	-	-	-	-	-	-
PAMIAFPB_00663	0.0	-	-	-	E	-	-	-	non supervised orthologous group
PAMIAFPB_00664	4.9e-156	-	-	-	-	-	-	-	-
PAMIAFPB_00665	1.57e-55	-	-	-	-	-	-	-	-
PAMIAFPB_00666	5.66e-169	-	-	-	-	-	-	-	-
PAMIAFPB_00669	1.65e-225	-	-	-	S	ko:K09924	-	ko00000	COG NOG19128 non supervised orthologous group
PAMIAFPB_00671	1.19e-168	-	-	-	-	-	-	-	-
PAMIAFPB_00672	4.34e-167	-	-	-	-	-	-	-	-
PAMIAFPB_00673	0.0	-	-	-	M	-	-	-	O-antigen ligase like membrane protein
PAMIAFPB_00674	1.52e-286	mro_1	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Converts alpha-aldose to the beta-anomer
PAMIAFPB_00675	0.0	-	-	-	S	-	-	-	protein conserved in bacteria
PAMIAFPB_00676	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
PAMIAFPB_00677	8.77e-286	mro_1	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Converts alpha-aldose to the beta-anomer
PAMIAFPB_00678	0.0	-	-	-	S	ko:K09704	-	ko00000	Conserved protein
PAMIAFPB_00679	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
PAMIAFPB_00680	0.0	-	-	-	G	-	-	-	COG NOG09951 non supervised orthologous group
PAMIAFPB_00681	0.0	-	-	-	S	-	-	-	COG NOG26804 non supervised orthologous group
PAMIAFPB_00682	0.0	-	-	-	M	-	-	-	Glycosyl hydrolase family 76
PAMIAFPB_00683	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4972)
PAMIAFPB_00684	2.85e-292	-	-	-	S	-	-	-	Domain of unknown function (DUF4972)
PAMIAFPB_00685	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 76
PAMIAFPB_00686	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_00687	0.0	-	-	-	H	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_00688	3.59e-283	-	-	-	PT	-	-	-	Sigma factor regulatory protein, FecR PupR family
PAMIAFPB_00689	3.48e-128	-	-	-	K	-	-	-	RNA polymerase sigma-70 factor, ECF subfamily
PAMIAFPB_00690	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 43 family
PAMIAFPB_00691	2.58e-275	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 43 family
PAMIAFPB_00692	0.0	-	-	-	S	-	-	-	COG NOG06097 non supervised orthologous group
PAMIAFPB_00693	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 2 family
PAMIAFPB_00694	0.0	-	-	-	G	-	-	-	COG NOG09951 non supervised orthologous group
PAMIAFPB_00695	1.41e-109	-	-	-	S	-	-	-	Protein of unknown function (DUF3828)
PAMIAFPB_00696	1.23e-73	-	-	-	-	-	-	-	-
PAMIAFPB_00697	3.57e-129	-	-	-	S	-	-	-	Tetratricopeptide repeat
PAMIAFPB_00698	0.0	-	-	-	S	-	-	-	TonB-dependent Receptor Plug Domain
PAMIAFPB_00699	1.64e-262	-	-	-	S	-	-	-	Domain of unknown function (DUF4361)
PAMIAFPB_00700	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_00701	0.0	-	-	-	P	-	-	-	TonB dependent receptor
PAMIAFPB_00702	0.0	-	-	-	S	-	-	-	IPT/TIG domain
PAMIAFPB_00703	0.0	-	-	-	G	-	-	-	COG NOG09951 non supervised orthologous group
PAMIAFPB_00704	6.85e-313	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_00705	9.21e-120	-	-	-	G	-	-	-	COG NOG09951 non supervised orthologous group
PAMIAFPB_00706	4.59e-61	-	-	-	S	-	-	-	IPT/TIG domain
PAMIAFPB_00707	0.0	-	-	-	H	-	-	-	cobalamin-transporting ATPase activity
PAMIAFPB_00708	5.3e-172	-	-	-	P	ko:K21572	-	ko00000,ko02000	Psort location OuterMembrane, score
PAMIAFPB_00710	0.0	-	-	-	S	-	-	-	TonB-dependent Receptor Plug Domain
PAMIAFPB_00711	1.48e-315	-	-	-	S	ko:K06921	-	ko00000	ATPase (AAA superfamily)
PAMIAFPB_00712	4.38e-109	-	-	-	G	-	-	-	COG NOG09951 non supervised orthologous group
PAMIAFPB_00713	4.98e-11	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_00714	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_00715	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_00716	1.34e-152	-	-	-	S	-	-	-	Protein of unknown function (DUF3823)
PAMIAFPB_00717	3.04e-287	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 43 family
PAMIAFPB_00718	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_00719	1.1e-258	envC	-	-	D	-	-	-	Peptidase, M23
PAMIAFPB_00720	1.76e-118	-	-	-	S	-	-	-	COG NOG29315 non supervised orthologous group
PAMIAFPB_00721	3.13e-114	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
PAMIAFPB_00722	1.11e-245	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
PAMIAFPB_00723	9.69e-99	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
PAMIAFPB_00724	0.0	dgt	3.1.5.1	-	F	ko:K01129	ko00230,map00230	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_00725	1.17e-247	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00726	5.6e-202	-	-	-	I	-	-	-	Acyl-transferase
PAMIAFPB_00728	9.58e-117	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PAMIAFPB_00729	2.5e-109	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
PAMIAFPB_00730	2.55e-159	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PAMIAFPB_00731	1.32e-38	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00732	4.27e-106	ftsI	3.4.16.4	-	M	ko:K03587	ko00550,ko01501,map00550,map01501	ko00000,ko00001,ko01000,ko01011,ko03036	Cell division protein FtsI penicillin-binding protein
PAMIAFPB_00733	0.0	ftsI	3.4.16.4	-	M	ko:K03587	ko00550,ko01501,map00550,map01501	ko00000,ko00001,ko01000,ko01011,ko03036	Cell division protein FtsI penicillin-binding protein
PAMIAFPB_00734	0.0	murE	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PAMIAFPB_00735	2.52e-301	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PAMIAFPB_00736	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PAMIAFPB_00737	7.23e-300	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
PAMIAFPB_00738	6.19e-263	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PAMIAFPB_00740	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
PAMIAFPB_00741	4.14e-176	ftsQ	-	-	M	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00742	8.55e-308	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PAMIAFPB_00743	1.18e-292	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PAMIAFPB_00744	1.25e-92	-	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
PAMIAFPB_00746	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat
PAMIAFPB_00747	1.45e-71	-	-	-	S	-	-	-	Domain of unknown function (DUF3244)
PAMIAFPB_00748	3.41e-296	-	-	-	-	-	-	-	-
PAMIAFPB_00749	5.88e-227	-	-	-	S	-	-	-	MAC/Perforin domain
PAMIAFPB_00750	1.31e-143	-	-	-	S	-	-	-	MAC/Perforin domain
PAMIAFPB_00753	0.0	-	-	-	S	-	-	-	MAC/Perforin domain
PAMIAFPB_00754	5.19e-103	-	-	-	-	-	-	-	-
PAMIAFPB_00755	8.99e-310	-	-	-	NU	-	-	-	Lipid A 3-O-deacylase (PagL)
PAMIAFPB_00756	2.83e-237	-	-	-	-	-	-	-	-
PAMIAFPB_00757	0.0	-	-	-	H	-	-	-	COG NOG08812 non supervised orthologous group
PAMIAFPB_00758	2.6e-176	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
PAMIAFPB_00759	2.99e-217	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
PAMIAFPB_00760	2.37e-140	-	-	-	M	-	-	-	Protein of unknown function (DUF3575)
PAMIAFPB_00761	1.52e-225	-	-	-	U	-	-	-	Domain of unknown function, B. Theta Gene description (DUF3868)
PAMIAFPB_00762	5.19e-133	-	-	-	M	-	-	-	Protein of unknown function (DUF3575)
PAMIAFPB_00764	1.7e-301	-	-	-	M	-	-	-	COG NOG23378 non supervised orthologous group
PAMIAFPB_00765	0.0	-	-	-	S	-	-	-	Major fimbrial subunit protein type IV, Fimbrillin, C-terminal
PAMIAFPB_00766	5.13e-220	-	-	-	S	-	-	-	Fimbrillin-A associated anchor proteins Mfa1 and Mfa2
PAMIAFPB_00769	2.48e-48	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
PAMIAFPB_00770	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PAMIAFPB_00771	1.17e-141	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00772	0.0	gpmI	5.4.2.12	-	G	ko:K15633	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PAMIAFPB_00773	0.0	-	-	-	CO	-	-	-	COG NOG39333 non supervised orthologous group
PAMIAFPB_00774	1.05e-36	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00775	2.55e-180	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00776	3.64e-221	corA	-	-	P	ko:K03284	-	ko00000,ko02000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00777	0.0	-	-	-	P	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_00779	8.86e-145	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PAMIAFPB_00780	0.0	hppA	3.6.1.1	-	C	ko:K15987	ko00190,map00190	ko00000,ko00001,ko01000	Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane
PAMIAFPB_00781	0.0	-	-	-	T	-	-	-	Two component regulator propeller
PAMIAFPB_00782	0.0	-	-	-	P	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_00783	0.0	-	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
PAMIAFPB_00784	1.84e-65	-	-	-	S	-	-	-	Belongs to the UPF0145 family
PAMIAFPB_00785	6.83e-294	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family
PAMIAFPB_00786	0.0	sufD	-	-	O	ko:K09015	-	ko00000	COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component
PAMIAFPB_00787	2.3e-174	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component
PAMIAFPB_00788	0.0	sufB	-	-	O	ko:K09014	-	ko00000	COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component
PAMIAFPB_00789	2.98e-55	cvpA	-	-	S	ko:K03558	-	ko00000	Psort location CytoplasmicMembrane, score
PAMIAFPB_00790	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PAMIAFPB_00791	1.24e-296	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
PAMIAFPB_00792	7.17e-104	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
PAMIAFPB_00793	1.61e-84	-	-	-	S	-	-	-	COG NOG29451 non supervised orthologous group
PAMIAFPB_00794	1.9e-164	-	-	-	S	ko:K07043	-	ko00000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00795	1.69e-131	-	-	-	S	-	-	-	Putative auto-transporter adhesin, head GIN domain
PAMIAFPB_00796	1.49e-102	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00797	5.95e-112	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PAMIAFPB_00798	2.89e-176	argB	2.7.2.8	-	F	ko:K00930	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the acetylglutamate kinase family. ArgB subfamily
PAMIAFPB_00799	0.0	speA	4.1.1.19	-	H	ko:K01585	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the biosynthesis of agmatine from arginine
PAMIAFPB_00800	4.68e-121	aroK	2.7.1.71	-	F	ko:K00891	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PAMIAFPB_00801	7.58e-146	-	-	-	S	ko:K07078	-	ko00000	oxidoreductase related to nitroreductase
PAMIAFPB_00802	2.05e-165	rnhA	3.1.26.4	-	C	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	double-stranded RNA RNA-DNA hybrid binding protein
PAMIAFPB_00803	7.39e-98	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
PAMIAFPB_00804	3.63e-269	-	-	-	S	-	-	-	Pfam:DUF2029
PAMIAFPB_00805	0.0	-	-	-	S	-	-	-	Pfam:DUF2029
PAMIAFPB_00806	4.35e-194	-	-	-	G	-	-	-	Domain of unknown function (DUF3473)
PAMIAFPB_00807	0.0	msbA	-	-	V	ko:K06147,ko:K11085	ko02010,map02010	ko00000,ko00001,ko01000,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
PAMIAFPB_00808	0.0	-	-	-	S	-	-	-	P-loop ATPase and inactivated derivatives
PAMIAFPB_00809	1.16e-146	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00810	0.0	-	-	-	-	-	-	-	-
PAMIAFPB_00811	1.45e-79	-	-	-	-	-	-	-	-
PAMIAFPB_00812	0.0	-	-	-	-	-	-	-	-
PAMIAFPB_00813	5.18e-307	-	-	-	-	-	-	-	-
PAMIAFPB_00814	8.96e-223	-	-	GT2	M	ko:K20534	-	ko00000,ko01000,ko01005,ko02000	Glycosyltransferase, group 2 family protein
PAMIAFPB_00815	9.13e-82	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
PAMIAFPB_00816	2.32e-235	-	-	-	S	-	-	-	Core-2/I-Branching enzyme
PAMIAFPB_00817	4.4e-249	vioA	2.6.1.33	-	E	ko:K20429	-	ko00000,ko01000	Belongs to the DegT DnrJ EryC1 family
PAMIAFPB_00818	3.53e-276	-	-	-	E	ko:K10907	-	ko00000,ko01000,ko01007	Aminotransferase class-V
PAMIAFPB_00819	2.44e-287	-	-	-	F	-	-	-	ATP-grasp domain
PAMIAFPB_00820	1.87e-102	-	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	acetyltransferase
PAMIAFPB_00821	3.17e-235	-	-	-	M	-	-	-	Glycosyltransferase, group 2 family
PAMIAFPB_00822	4.83e-70	-	-	-	S	-	-	-	MAC/Perforin domain
PAMIAFPB_00823	3.16e-287	-	-	-	L	-	-	-	COG COG3328 Transposase and inactivated derivatives
PAMIAFPB_00824	6.35e-152	-	-	-	S	-	-	-	Glycosyltransferase, group 2 family protein
PAMIAFPB_00825	7.84e-79	-	-	-	S	-	-	-	Glycosyl transferase family 2
PAMIAFPB_00826	1.44e-159	-	-	-	M	-	-	-	Glycosyl transferases group 1
PAMIAFPB_00827	1.05e-276	-	-	-	M	-	-	-	Glycosyl transferases group 1
PAMIAFPB_00828	5.03e-281	-	-	-	M	-	-	-	Glycosyl transferases group 1
PAMIAFPB_00829	2.98e-245	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PAMIAFPB_00830	0.0	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PAMIAFPB_00831	1.14e-183	-	-	-	T	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00832	7.35e-231	lpsA	-	-	S	-	-	-	Glycosyl transferase family 90
PAMIAFPB_00833	3.37e-250	-	-	GT9	M	ko:K02843	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	Glycosyltransferase family 9
PAMIAFPB_00834	7.55e-142	-	-	-	M	-	-	-	Protein of unknown function (DUF4254)
PAMIAFPB_00835	7.25e-241	pdxB	1.1.1.290	-	H	ko:K03473	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate
PAMIAFPB_00836	8.72e-142	purN	2.1.2.2	-	F	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PAMIAFPB_00837	7.43e-45	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PAMIAFPB_00838	9.57e-305	fabF	2.3.1.179	-	I	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PAMIAFPB_00839	9.91e-182	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PAMIAFPB_00840	1.65e-242	pfkA	2.7.1.11, 2.7.1.90	-	F	ko:K21071	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PAMIAFPB_00841	0.0	-	-	-	H	-	-	-	GH3 auxin-responsive promoter
PAMIAFPB_00842	5.94e-262	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PAMIAFPB_00843	0.0	-	2.7.11.1	-	L	ko:K08282	-	ko00000,ko01000	SNF2 family N-terminal domain
PAMIAFPB_00844	4.27e-186	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00845	2.62e-208	-	-	-	V	-	-	-	HlyD family secretion protein
PAMIAFPB_00846	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter, ATP-binding protein
PAMIAFPB_00848	1.14e-81	-	-	-	M	-	-	-	Glycosyltransferase, group 1 family protein
PAMIAFPB_00849	1.38e-118	-	-	-	S	-	-	-	radical SAM domain protein
PAMIAFPB_00850	4.12e-160	-	-	-	C	ko:K06871	-	ko00000	4Fe-4S single cluster domain
PAMIAFPB_00851	7.4e-79	-	-	-	-	-	-	-	-
PAMIAFPB_00853	1.7e-112	-	-	-	M	-	-	-	Glycosyl transferases group 1
PAMIAFPB_00854	1.78e-43	-	-	-	KT	-	-	-	Lanthionine synthetase C-like protein
PAMIAFPB_00855	2.06e-81	-	-	-	M	-	-	-	N-terminal domain of galactosyltransferase
PAMIAFPB_00856	3.01e-133	-	-	-	S	-	-	-	TIGRFAM methyltransferase FkbM family
PAMIAFPB_00857	5.05e-61	-	-	-	-	-	-	-	-
PAMIAFPB_00858	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
PAMIAFPB_00859	0.0	-	4.2.2.20, 4.2.2.21	-	H	ko:K08961	-	ko00000,ko01000	Chondroitin sulfate ABC lyase
PAMIAFPB_00860	0.0	aslA	-	-	P	-	-	-	COG COG3119 Arylsulfatase A and related enzymes
PAMIAFPB_00861	4.18e-307	-	-	-	O	-	-	-	Glycosyl Hydrolase Family 88
PAMIAFPB_00862	0.0	-	-	-	G	-	-	-	IPT/TIG domain
PAMIAFPB_00863	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_00864	0.0	-	-	-	P	-	-	-	SusD family
PAMIAFPB_00865	2.37e-251	-	-	-	S	-	-	-	Domain of unknown function (DUF4361)
PAMIAFPB_00866	3.61e-87	paaI	-	-	Q	ko:K02614	ko00360,map00360	ko00000,ko00001,ko01000	phenylacetic acid degradation protein
PAMIAFPB_00867	4.88e-196	-	-	-	NU	-	-	-	Protein of unknown function (DUF3108)
PAMIAFPB_00868	0.0	-	-	-	S	-	-	-	COG NOG07965 non supervised orthologous group
PAMIAFPB_00869	0.0	lacZ	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	COG3250 Beta-galactosidase beta-glucuronidase
PAMIAFPB_00870	4.47e-245	mtrC	-	-	M	ko:K03585	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMIAFPB_00871	0.0	mexF	-	-	V	ko:K03296	-	ko00000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMIAFPB_00872	4.82e-296	-	-	-	MU	-	-	-	Efflux transporter, outer membrane factor lipoprotein, NodT family
PAMIAFPB_00873	9.03e-115	lpxA2	2.3.1.129	-	M	ko:K00677	ko00540,ko01100,ko01503,map00540,map01100,map01503	ko00000,ko00001,ko00002,ko01000,ko01005	Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PAMIAFPB_00874	1.71e-162	-	-	-	T	-	-	-	Carbohydrate-binding family 9
PAMIAFPB_00875	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_00876	4.36e-104	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PAMIAFPB_00877	0.0	-	-	-	P	-	-	-	COG COG3119 Arylsulfatase A and related enzymes
PAMIAFPB_00878	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_00879	0.0	-	-	-	GM	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_00880	2.7e-258	-	-	-	S	-	-	-	Domain of unknown function (DUF5017)
PAMIAFPB_00881	0.0	-	-	-	S	-	-	-	COG NOG38840 non supervised orthologous group
PAMIAFPB_00882	0.0	-	-	-	M	-	-	-	Domain of unknown function (DUF4955)
PAMIAFPB_00883	2.59e-228	dus	-	-	H	-	-	-	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PAMIAFPB_00884	2.11e-303	-	-	-	-	-	-	-	-
PAMIAFPB_00885	0.0	chonabc	4.2.2.20, 4.2.2.21	-	N	ko:K08961	-	ko00000,ko01000	Chondroitin sulfate ABC lyase
PAMIAFPB_00886	3.95e-122	-	-	-	S	-	-	-	COG NOG28211 non supervised orthologous group
PAMIAFPB_00887	0.0	-	-	-	CO	-	-	-	COG NOG24773 non supervised orthologous group
PAMIAFPB_00888	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00889	6.38e-183	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the DapB family
PAMIAFPB_00890	0.0	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	signal peptidase i
PAMIAFPB_00891	2.81e-231	lepB_1	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PAMIAFPB_00892	7.55e-155	-	-	-	C	-	-	-	WbqC-like protein
PAMIAFPB_00893	5.98e-105	-	-	-	-	-	-	-	-
PAMIAFPB_00894	0.0	bglB	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 3 family
PAMIAFPB_00895	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF5121)
PAMIAFPB_00896	0.0	-	3.2.1.45	GH30	G	ko:K01201	ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 30 family
PAMIAFPB_00897	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_00898	6.38e-165	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_00899	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_00900	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00901	7.72e-297	-	-	-	S	-	-	-	Belongs to the peptidase M16 family
PAMIAFPB_00902	4.92e-109	-	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the LOG family
PAMIAFPB_00903	9.89e-138	kdsD	5.3.1.13	-	M	ko:K06041	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	sugar phosphate isomerase involved in capsule formation
PAMIAFPB_00904	7.39e-225	-	2.7.1.4	-	G	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	COG COG0524 Sugar kinases, ribokinase family
PAMIAFPB_00905	9.05e-257	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
PAMIAFPB_00907	0.0	-	3.6.4.13	-	L	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	Belongs to the DEAD box helicase family
PAMIAFPB_00908	0.0	-	-	-	T	-	-	-	Response regulator receiver domain protein
PAMIAFPB_00909	1.41e-250	-	-	-	G	-	-	-	Glycosyl hydrolase
PAMIAFPB_00910	0.0	-	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	COG COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases
PAMIAFPB_00911	0.0	-	-	-	G	-	-	-	IPT/TIG domain
PAMIAFPB_00912	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_00913	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	Pfam:SusD
PAMIAFPB_00914	3.88e-240	-	-	-	S	-	-	-	Domain of unknown function (DUF4361)
PAMIAFPB_00915	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 76
PAMIAFPB_00916	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
PAMIAFPB_00917	0.0	-	3.2.1.20	GH31	M	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	COG NOG06228 non supervised orthologous group
PAMIAFPB_00918	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
PAMIAFPB_00919	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 2 family
PAMIAFPB_00920	0.0	-	-	-	M	-	-	-	Peptidase family S41
PAMIAFPB_00921	3.78e-73	-	-	-	EG	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_00922	2.76e-62	-	-	-	EG	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_00923	0.0	-	-	-	E	-	-	-	COG NOG04781 non supervised orthologous group
PAMIAFPB_00924	6.95e-300	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_00925	0.0	cap	-	-	S	-	-	-	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PAMIAFPB_00926	2.23e-188	-	-	-	S	-	-	-	Phospholipase/Carboxylesterase
PAMIAFPB_00927	3.32e-242	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PAMIAFPB_00928	7.17e-279	spmA	-	-	S	ko:K06373	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_00929	5.5e-97	ybeY	-	-	S	-	-	-	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PAMIAFPB_00930	0.0	-	-	-	O	-	-	-	non supervised orthologous group
PAMIAFPB_00931	5.46e-211	-	-	-	-	-	-	-	-
PAMIAFPB_00932	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_00933	0.0	-	-	-	P	-	-	-	Secretin and TonB N terminus short domain
PAMIAFPB_00934	2.51e-280	-	-	-	PT	-	-	-	Sigma factor regulatory protein, FecR PupR family
PAMIAFPB_00935	5.57e-129	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
PAMIAFPB_00936	0.0	-	-	-	O	-	-	-	Domain of unknown function (DUF5118)
PAMIAFPB_00937	0.0	-	-	-	O	-	-	-	COG NOG06109 non supervised orthologous group
PAMIAFPB_00938	0.0	-	-	-	S	-	-	-	PKD-like family
PAMIAFPB_00939	1.25e-146	-	-	-	S	-	-	-	Domain of unknown function (DUF4843)
PAMIAFPB_00940	0.0	-	-	-	J	ko:K21572	-	ko00000,ko02000	Pfam:SusD
PAMIAFPB_00941	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_00942	2.39e-283	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PAMIAFPB_00943	6.27e-131	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor, ECF subfamily
PAMIAFPB_00944	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PAMIAFPB_00945	1.14e-121	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PAMIAFPB_00946	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PAMIAFPB_00947	6.98e-104	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PAMIAFPB_00948	5.37e-74	ypjD	-	-	S	-	-	-	MazG nucleotide pyrophosphohydrolase domain
PAMIAFPB_00949	2.84e-209	deoC	4.1.2.4	-	H	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PAMIAFPB_00950	1.24e-166	-	-	-	S	-	-	-	Protein of unknown function (DUF1266)
PAMIAFPB_00951	2.2e-225	ispB	2.5.1.90	-	H	ko:K02523	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PAMIAFPB_00952	1.41e-25	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PAMIAFPB_00953	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PAMIAFPB_00954	1.74e-88	-	-	-	S	-	-	-	COG NOG29882 non supervised orthologous group
PAMIAFPB_00955	1.13e-174	-	-	-	T	ko:K02477	-	ko00000,ko02022	COG3279 Response regulator of the LytR AlgR family
PAMIAFPB_00956	0.0	-	-	-	T	-	-	-	Histidine kinase
PAMIAFPB_00957	6.78e-217	cysE	2.3.1.30	-	E	ko:K00640	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 9.97
PAMIAFPB_00958	6.34e-80	rlmL	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
PAMIAFPB_00959	1.53e-209	rlmL	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
PAMIAFPB_00960	0.0	pepX2	3.4.14.5	-	E	ko:K01278	ko04974,map04974	ko00000,ko00001,ko01000,ko01002,ko04090,ko04147	Peptidase, S9A B C family, catalytic domain protein
PAMIAFPB_00961	2.76e-306	purD	6.3.4.13	-	F	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the GARS family
PAMIAFPB_00962	2.31e-233	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_00963	1.96e-103	yqaA	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
PAMIAFPB_00964	2.69e-161	mnmC	-	-	S	-	-	-	Psort location Cytoplasmic, score
PAMIAFPB_00965	4.99e-223	mntA	-	-	P	ko:K09815,ko:K11707	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0803 ABC-type metal ion transport system, periplasmic component surface adhesin
PAMIAFPB_00966	2.34e-185	znuC	-	-	P	ko:K09817	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PAMIAFPB_00967	0.0	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_00968	6e-154	pgdA_1	-	-	G	-	-	-	Psort location Cytoplasmic, score
PAMIAFPB_00969	4.22e-244	queG	1.17.99.6	-	C	ko:K18979	-	ko00000,ko01000,ko03016	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PAMIAFPB_00970	1.32e-248	-	-	-	S	-	-	-	Putative binding domain, N-terminal
PAMIAFPB_00971	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4302)
PAMIAFPB_00972	2.49e-230	-	-	-	S	-	-	-	Putative zinc-binding metallo-peptidase
PAMIAFPB_00973	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	COG NOG28139 non supervised orthologous group
PAMIAFPB_00974	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_00975	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_00976	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	COG NOG28139 non supervised orthologous group
PAMIAFPB_00977	4.76e-213	-	-	-	S	-	-	-	Putative zinc-binding metallo-peptidase
PAMIAFPB_00978	5.97e-316	-	-	-	S	-	-	-	Domain of unknown function (DUF4302)
PAMIAFPB_00979	5.56e-245	-	-	-	S	-	-	-	Putative binding domain, N-terminal
PAMIAFPB_00980	2.12e-290	-	-	-	-	-	-	-	-
PAMIAFPB_00981	4.91e-304	-	3.1.1.11	-	G	ko:K01051	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	COG NOG24911 non supervised orthologous group
PAMIAFPB_00982	1.06e-192	idnO	1.1.1.69	-	IQ	ko:K00046	-	ko00000,ko01000	Oxidoreductase, short chain dehydrogenase reductase family protein
PAMIAFPB_00983	1.47e-210	kduI	5.3.1.17	-	G	ko:K01815	ko00040,map00040	ko00000,ko00001,ko01000	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
PAMIAFPB_00986	3.68e-314	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PAMIAFPB_00987	1.24e-163	-	-	-	L	ko:K03424	-	ko00000,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_00988	1.92e-64	yidD	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
PAMIAFPB_00989	4.48e-67	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PAMIAFPB_00990	1.97e-174	hemD	4.2.1.75	-	H	ko:K01719	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Uroporphyrinogen-III synthase
PAMIAFPB_00991	3.51e-164	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_00992	1.41e-134	yvdD	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the LOG family
PAMIAFPB_00994	1.37e-221	-	-	-	S	-	-	-	Domain of unknown function (DUF4848)
PAMIAFPB_00996	0.0	-	-	-	S	-	-	-	tetratricopeptide repeat
PAMIAFPB_00997	2.28e-308	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PAMIAFPB_00999	4.38e-35	-	-	-	-	-	-	-	-
PAMIAFPB_01000	1.32e-106	folK	2.7.6.3	-	H	ko:K00950	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase
PAMIAFPB_01001	3.49e-83	-	-	-	-	-	-	-	-
PAMIAFPB_01002	2.31e-257	queA	2.4.99.17	-	H	ko:K07568	-	ko00000,ko01000,ko03016	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PAMIAFPB_01003	4.32e-174	truB	5.4.99.25	-	J	ko:K03177	-	ko00000,ko01000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PAMIAFPB_01004	9.72e-183	uppP	3.6.1.27	-	V	ko:K06153	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PAMIAFPB_01005	2.06e-46	fjo13	-	-	S	-	-	-	COG NOG19122 non supervised orthologous group
PAMIAFPB_01006	3.37e-193	ftsX	-	-	D	ko:K09811	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03036	Belongs to the ABC-4 integral membrane protein family. FtsX subfamily
PAMIAFPB_01007	4.11e-222	-	-	-	H	-	-	-	Methyltransferase domain protein
PAMIAFPB_01008	5.91e-46	-	-	-	-	-	-	-	-
PAMIAFPB_01009	9.9e-197	-	-	-	M	-	-	-	COG COG3209 Rhs family protein
PAMIAFPB_01010	3.98e-256	-	-	-	S	-	-	-	Immunity protein 65
PAMIAFPB_01011	8.07e-173	-	-	-	M	-	-	-	JAB-like toxin 1
PAMIAFPB_01013	0.0	-	-	-	M	-	-	-	COG COG3209 Rhs family protein
PAMIAFPB_01014	0.0	-	-	-	M	-	-	-	COG3209 Rhs family protein
PAMIAFPB_01015	6.21e-12	-	-	-	-	-	-	-	-
PAMIAFPB_01016	3.74e-125	-	3.5.1.28	-	V	ko:K01447	-	ko00000,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01017	1.93e-112	-	-	-	L	-	-	-	COG NOG31286 non supervised orthologous group
PAMIAFPB_01018	5.68e-86	-	-	-	L	-	-	-	Domain of unknown function (DUF4373)
PAMIAFPB_01019	3.35e-58	-	-	-	L	-	-	-	Domain of unknown function (DUF4373)
PAMIAFPB_01020	3.32e-72	-	-	-	-	-	-	-	-
PAMIAFPB_01021	6.88e-169	-	-	-	K	-	-	-	Bacteriophage CI repressor helix-turn-helix domain
PAMIAFPB_01022	0.0	miaB	2.8.4.3	-	J	ko:K06168	-	ko00000,ko01000,ko03016	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PAMIAFPB_01023	2.5e-75	-	-	-	-	-	-	-	-
PAMIAFPB_01024	0.0	scpC	2.8.3.18, 3.1.2.1	-	C	ko:K01067,ko:K18118	ko00020,ko00620,ko00650,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00650,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	COG0427 Acetyl-CoA hydrolase
PAMIAFPB_01025	1.07e-126	-	-	-	M	ko:K03832	-	ko00000,ko02000	Gram-negative bacterial TonB protein C-terminal
PAMIAFPB_01026	1.49e-57	-	-	-	-	-	-	-	-
PAMIAFPB_01027	1.03e-98	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
PAMIAFPB_01028	3.37e-130	-	-	-	S	-	-	-	PFAM Formylglycine-generating sulfatase enzyme
PAMIAFPB_01029	4.87e-137	-	-	-	S	-	-	-	PFAM Formylglycine-generating sulfatase enzyme
PAMIAFPB_01030	0.0	dacB	3.4.16.4	-	M	ko:K07259	ko00550,map00550	ko00000,ko00001,ko01000,ko01002,ko01011	COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)
PAMIAFPB_01031	1.86e-316	lpdA	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3)
PAMIAFPB_01032	2.11e-80	-	-	-	S	-	-	-	COG NOG29403 non supervised orthologous group
PAMIAFPB_01033	0.0	nadB	1.4.3.16	-	H	ko:K00278	ko00250,ko00760,ko01100,map00250,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of L-aspartate to iminoaspartate
PAMIAFPB_01034	5.38e-57	-	-	-	S	-	-	-	Domain of unknown function (DUF4884)
PAMIAFPB_01035	3.5e-138	rbr	-	-	C	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01036	0.0	sulP	-	-	P	ko:K03321	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01037	1.55e-274	-	-	-	S	-	-	-	COGs COG4299 conserved
PAMIAFPB_01038	0.0	lacZ	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	COG3250 Beta-galactosidase beta-glucuronidase
PAMIAFPB_01039	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain
PAMIAFPB_01040	0.0	-	-	-	P	-	-	-	COG COG3119 Arylsulfatase A and related enzymes
PAMIAFPB_01041	0.0	-	-	-	G	-	-	-	Domain of unknown function (DUF5014)
PAMIAFPB_01042	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_01043	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_01045	0.0	-	3.2.1.51	GH95	G	ko:K15923	ko00511,map00511	ko00000,ko00001,ko01000	COG NOG04001 non supervised orthologous group
PAMIAFPB_01046	0.0	-	-	-	T	-	-	-	Y_Y_Y domain
PAMIAFPB_01047	0.0	-	3.1.1.53	-	S	ko:K05970	-	ko00000,ko01000	Carbohydrate esterase, sialic acid-specific acetylesterase
PAMIAFPB_01048	0.0	-	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
PAMIAFPB_01049	0.0	-	-	-	P	-	-	-	Psort location Cytoplasmic, score
PAMIAFPB_01051	1.35e-190	-	-	-	C	-	-	-	radical SAM domain protein
PAMIAFPB_01052	0.0	-	-	-	L	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_01053	4.91e-127	-	-	-	S	-	-	-	COG NOG14459 non supervised orthologous group
PAMIAFPB_01054	1.2e-123	spoU	-	-	J	-	-	-	RNA methylase, SpoU family K00599
PAMIAFPB_01056	5.22e-227	nadA	2.5.1.72	-	H	ko:K03517	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
PAMIAFPB_01057	0.0	-	3.2.1.20	GH31	E	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Glycosyl-hydrolase 97 C-terminal, oligomerisation
PAMIAFPB_01058	8.55e-216	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	COG0584 Glycerophosphoryl diester phosphodiesterase
PAMIAFPB_01059	1.51e-161	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
PAMIAFPB_01060	0.0	-	-	-	M	-	-	-	Right handed beta helix region
PAMIAFPB_01061	0.0	-	-	-	S	-	-	-	Domain of unknown function
PAMIAFPB_01062	4.7e-305	-	-	-	S	-	-	-	Domain of unknown function (DUF5126)
PAMIAFPB_01063	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	non supervised orthologous group
PAMIAFPB_01064	0.0	-	-	-	H	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_01066	0.0	-	3.2.1.51	GH95	G	ko:K15923	ko00511,map00511	ko00000,ko00001,ko01000	Glycosyl hydrolase family 65, N-terminal domain
PAMIAFPB_01067	1.48e-147	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_01068	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_01069	0.0	-	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
PAMIAFPB_01070	0.0	-	3.1.1.53	-	G	ko:K05970	-	ko00000,ko01000	Glycosyl hydrolase family 2, sugar binding domain protein
PAMIAFPB_01071	0.0	-	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
PAMIAFPB_01072	0.0	-	-	-	G	-	-	-	Alpha-1,2-mannosidase
PAMIAFPB_01073	5.39e-188	-	-	-	N	ko:K02557	ko02030,ko02040,map02030,map02040	ko00000,ko00001,ko02000,ko02035	COG COG1360 Flagellar motor protein
PAMIAFPB_01074	2.55e-136	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PAMIAFPB_01075	2.1e-218	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_01076	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
PAMIAFPB_01077	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
PAMIAFPB_01079	0.0	-	3.1.1.53	-	G	ko:K05970	-	ko00000,ko01000	COG NOG04984 non supervised orthologous group
PAMIAFPB_01080	1.77e-203	eamA	-	-	EG	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01081	4.4e-212	rhaR_1	-	-	K	-	-	-	transcriptional regulator (AraC family)
PAMIAFPB_01082	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PAMIAFPB_01083	0.0	-	-	-	S	-	-	-	MAC/Perforin domain
PAMIAFPB_01084	2.72e-155	-	2.3.1.28	-	V	ko:K19271	-	br01600,ko00000,ko01000,ko01504	COG4845 Chloramphenicol O-acetyltransferase
PAMIAFPB_01085	1.42e-213	lgt	-	-	M	-	-	-	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PAMIAFPB_01086	1.73e-216	panE	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PAMIAFPB_01087	1.64e-260	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PAMIAFPB_01088	0.0	pruA	1.2.1.3, 1.2.1.88, 1.5.5.2	-	C	ko:K00128,ko:K00294,ko:K13821	ko00010,ko00053,ko00071,ko00250,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00250,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000,ko03000	Proline dehydrogenase
PAMIAFPB_01090	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 2 family
PAMIAFPB_01091	2.77e-270	araJ	-	-	EGP	ko:K08156	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01092	0.0	-	-	-	O	ko:K06889	-	ko00000	COG COG1073 Hydrolases of the alpha beta superfamily
PAMIAFPB_01093	0.0	-	-	-	-	-	-	-	-
PAMIAFPB_01094	1.05e-252	-	-	-	-	-	-	-	-
PAMIAFPB_01095	2.17e-137	-	-	-	P	-	-	-	Psort location Cytoplasmic, score
PAMIAFPB_01096	1.23e-226	-	-	-	P	-	-	-	Psort location Cytoplasmic, score
PAMIAFPB_01097	8.27e-253	abnA	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 43 family
PAMIAFPB_01098	0.0	-	3.1.6.1	-	P	ko:K01130	ko00140,ko00600,map00140,map00600	ko00000,ko00001,ko01000	COG COG3119 Arylsulfatase A and related enzymes
PAMIAFPB_01099	0.0	-	3.1.6.1	-	P	ko:K01130	ko00140,ko00600,map00140,map00600	ko00000,ko00001,ko01000	COG COG3119 Arylsulfatase A and related enzymes
PAMIAFPB_01100	1.55e-254	-	-	-	-	-	-	-	-
PAMIAFPB_01101	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_01102	0.0	-	-	-	GM	ko:K21572	-	ko00000,ko02000	COG NOG26302 non supervised orthologous group
PAMIAFPB_01103	0.0	-	-	-	M	-	-	-	Sulfatase
PAMIAFPB_01104	9.41e-155	-	-	-	I	-	-	-	Carboxylesterase family
PAMIAFPB_01106	4.27e-142	-	-	-	-	-	-	-	-
PAMIAFPB_01107	4.82e-137	-	-	-	-	-	-	-	-
PAMIAFPB_01108	0.0	-	-	-	T	-	-	-	Y_Y_Y domain
PAMIAFPB_01109	0.0	-	-	-	G	-	-	-	Alpha-L-arabinofuranosidase C-terminal domain
PAMIAFPB_01110	0.0	-	-	-	P	-	-	-	COG COG3119 Arylsulfatase A and related enzymes
PAMIAFPB_01111	6e-297	-	-	-	G	-	-	-	Glycosyl hydrolase family 43
PAMIAFPB_01112	0.0	-	3.1.6.1	-	P	ko:K01130	ko00140,ko00600,map00140,map00600	ko00000,ko00001,ko01000	COG COG3119 Arylsulfatase A and related enzymes
PAMIAFPB_01113	0.0	-	-	-	G	-	-	-	Glycosyl hydrolases family 2, TIM barrel domain
PAMIAFPB_01114	0.0	-	-	-	S	ko:K21557	-	ko00000,ko03000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01115	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_01116	0.0	-	-	-	GM	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_01117	0.0	-	-	-	S	ko:K21571	-	ko00000	Outer membrane protein SusF_SusE
PAMIAFPB_01118	0.0	-	3.2.1.11	GH66	G	ko:K05988	ko00500,map00500	ko00000,ko00001,ko01000	COG NOG34737 non supervised orthologous group
PAMIAFPB_01119	0.0	-	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
PAMIAFPB_01120	0.0	-	3.2.1.177	GH31	G	ko:K01811	-	ko00000,ko01000	Domain of unknown function (DUF5110)
PAMIAFPB_01121	2.21e-199	-	-	-	I	-	-	-	COG0657 Esterase lipase
PAMIAFPB_01122	0.0	-	-	-	S	ko:K07133	-	ko00000	ATPase (AAA superfamily)
PAMIAFPB_01123	0.0	-	3.2.1.80	-	M	ko:K03332	ko00051,map00051	ko00000,ko00001,ko01000	Glycosyl hydrolases family 32
PAMIAFPB_01124	6.48e-80	-	-	-	S	-	-	-	Cupin domain protein
PAMIAFPB_01125	4.38e-216	cysK	2.5.1.47	-	E	ko:K01738,ko:K12339	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
PAMIAFPB_01126	0.0	-	-	-	NU	-	-	-	CotH kinase protein
PAMIAFPB_01127	1.44e-114	-	-	-	S	ko:K07005	-	ko00000	Pyridoxamine 5'-phosphate oxidase family protein
PAMIAFPB_01128	0.0	rnr	-	-	J	ko:K12573,ko:K12585	ko03018,map03018	ko00000,ko00001,ko00002,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PAMIAFPB_01130	2.11e-249	-	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	NAD dependent epimerase dehydratase family
PAMIAFPB_01131	9.79e-232	-	-	-	I	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01132	2e-240	dus	-	-	H	-	-	-	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PAMIAFPB_01133	4.48e-300	prtC	-	-	O	ko:K08303	ko05120,map05120	ko00000,ko00001,ko01000,ko01002	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01134	1.66e-92	-	-	-	S	ko:K07107	-	ko00000,ko01000	acyl-CoA thioester hydrolase, YbgC YbaW family
PAMIAFPB_01135	2.87e-258	dprA	-	-	LU	ko:K04096	-	ko00000	Rossmann fold nucleotide-binding protein involved in DNA uptake
PAMIAFPB_01136	0.0	-	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
PAMIAFPB_01137	0.0	-	-	-	K	ko:K03088	-	ko00000,ko03021	DNA-templated transcription, initiation
PAMIAFPB_01138	0.0	-	3.2.1.24	GH38	G	ko:K01191	ko00511,map00511	ko00000,ko00001,ko01000,ko04131	Alpha mannosidase, middle domain
PAMIAFPB_01139	0.0	-	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	glycosyl hydrolase, family 3
PAMIAFPB_01140	1.63e-79	-	-	-	S	-	-	-	Domain of unknown function (DUF4361)
PAMIAFPB_01141	1.2e-212	-	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	abc-type fe3 -hydroxamate transport system, periplasmic component
PAMIAFPB_01142	6.62e-231	-	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	abc-type fe3 -hydroxamate transport system, periplasmic component
PAMIAFPB_01143	0.0	-	-	-	H	-	-	-	cobalamin-transporting ATPase activity
PAMIAFPB_01144	1.36e-289	-	-	-	CO	-	-	-	amine dehydrogenase activity
PAMIAFPB_01145	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
PAMIAFPB_01146	0.0	-	-	-	T	-	-	-	COG NOG26059 non supervised orthologous group
PAMIAFPB_01147	5.27e-190	-	-	-	S	ko:K06921	-	ko00000	ATPase (AAA superfamily)
PAMIAFPB_01148	1.06e-295	-	-	-	M	-	-	-	COG NOG24980 non supervised orthologous group
PAMIAFPB_01149	8.56e-180	-	-	-	S	-	-	-	COG NOG26135 non supervised orthologous group
PAMIAFPB_01150	1.22e-51	-	-	-	S	-	-	-	COG NOG31846 non supervised orthologous group
PAMIAFPB_01151	9.07e-196	-	-	-	K	-	-	-	Transcriptional regulator, AraC family
PAMIAFPB_01152	0.0	-	-	-	P	-	-	-	Sulfatase
PAMIAFPB_01153	1.92e-20	-	-	-	K	-	-	-	transcriptional regulator
PAMIAFPB_01155	5.27e-185	frdB	1.3.5.1, 1.3.5.4	-	C	ko:K00240	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	COG0479 Succinate dehydrogenase fumarate reductase Fe-S protein subunit
PAMIAFPB_01156	0.0	sdhA	1.3.5.1, 1.3.5.4	-	C	ko:K00239	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134	ko00000,ko00001,ko00002,ko01000	COG1053 Succinate dehydrogenase fumarate reductase flavoprotein subunit
PAMIAFPB_01157	4.85e-168	sdhC	-	-	C	ko:K00241	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002	Succinate dehydrogenase cytochrome B subunit, b558 family
PAMIAFPB_01158	6.43e-239	-	-	-	K	-	-	-	transcriptional regulator (AraC family)
PAMIAFPB_01159	0.0	-	-	-	P	-	-	-	Domain of unknown function (DUF4976)
PAMIAFPB_01160	2.81e-231	-	3.2.1.14, 3.2.1.4	GH18,GH5,GH9	G	ko:K01179,ko:K01183	ko00500,ko00520,ko01100,map00500,map00520,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 18 family
PAMIAFPB_01161	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_01162	0.0	-	-	-	P	-	-	-	TonB-dependent Receptor Plug Domain
PAMIAFPB_01163	2.27e-307	-	-	-	S	-	-	-	amine dehydrogenase activity
PAMIAFPB_01164	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_01165	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	Psort location OuterMembrane, score
PAMIAFPB_01166	3.73e-207	-	-	-	S	-	-	-	Domain of unknown function (DUF4361)
PAMIAFPB_01167	0.0	-	-	-	M	-	-	-	COG NOG07608 non supervised orthologous group
PAMIAFPB_01169	3.9e-109	-	-	-	S	-	-	-	Virulence protein RhuM family
PAMIAFPB_01170	1.06e-142	-	-	-	L	-	-	-	DNA-binding protein
PAMIAFPB_01171	2.24e-206	-	-	-	S	-	-	-	COG3943 Virulence protein
PAMIAFPB_01172	2.94e-90	-	-	-	-	-	-	-	-
PAMIAFPB_01173	1.36e-229	-	-	-	PT	-	-	-	Sigma factor regulatory protein, FecR PupR family
PAMIAFPB_01174	5.75e-119	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor, ECF subfamily
PAMIAFPB_01175	0.0	-	-	-	H	-	-	-	Outer membrane protein beta-barrel family
PAMIAFPB_01176	0.0	ctpA	3.4.21.102	-	M	ko:K03797	-	ko00000,ko01000,ko01002	Belongs to the peptidase S41A family
PAMIAFPB_01177	2.25e-105	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PAMIAFPB_01178	2.56e-204	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	COG0187 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit
PAMIAFPB_01179	6.14e-190	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	COG0187 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit
PAMIAFPB_01180	2.8e-278	yghO	-	-	K	-	-	-	COG NOG07967 non supervised orthologous group
PAMIAFPB_01181	2.05e-138	-	-	-	S	-	-	-	PFAM ORF6N domain
PAMIAFPB_01182	0.0	-	-	-	S	-	-	-	PQQ enzyme repeat protein
PAMIAFPB_01183	0.0	-	-	-	E	-	-	-	Sodium:solute symporter family
PAMIAFPB_01184	3.83e-301	-	2.4.1.281	-	G	ko:K16212	-	ko00000,ko01000	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
PAMIAFPB_01185	3.98e-279	-	-	-	N	-	-	-	domain, Protein
PAMIAFPB_01186	0.0	-	-	-	M	-	-	-	Glycosyl hydrolase family 30 TIM-barrel domain
PAMIAFPB_01187	0.0	-	-	-	GM	ko:K21572	-	ko00000,ko02000	Pfam:SusD
PAMIAFPB_01188	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_01189	3.15e-229	-	-	-	S	-	-	-	Metalloenzyme superfamily
PAMIAFPB_01190	3.23e-309	-	-	-	O	-	-	-	protein conserved in bacteria
PAMIAFPB_01191	0.0	-	-	-	S	-	-	-	COG NOG30867 non supervised orthologous group
PAMIAFPB_01192	3.14e-211	yrbG	-	-	P	ko:K07301	-	ko00000,ko02000	K -dependent Na Ca exchanger
PAMIAFPB_01193	0.0	mscM	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01194	2.03e-256	-	-	-	S	-	-	-	6-bladed beta-propeller
PAMIAFPB_01195	1.1e-227	-	3.1.3.2	-	S	ko:K14379	ko00740,ko01100,ko04142,ko04380,ko05323,map00740,map01100,map04142,map04380,map05323	ko00000,ko00001,ko01000	Purple acid phosphatase
PAMIAFPB_01196	0.0	-	-	-	M	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_01197	0.0	-	-	-	E	-	-	-	COG NOG04153 non supervised orthologous group
PAMIAFPB_01198	1.05e-219	-	-	-	S	-	-	-	Domain of unknown function (DUF4959)
PAMIAFPB_01199	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	non supervised orthologous group
PAMIAFPB_01200	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_01201	2.96e-212	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PAMIAFPB_01202	6.37e-130	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
PAMIAFPB_01203	0.0	-	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Glycosyl hydrolase family 3 C-terminal domain protein
PAMIAFPB_01204	4.9e-283	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01205	1.06e-200	ddpX	3.4.13.22	-	M	ko:K08641	ko01502,ko02020,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
PAMIAFPB_01206	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01207	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01208	0.0	-	-	-	K	-	-	-	Transcriptional regulator
PAMIAFPB_01210	2.56e-70	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_01211	3.43e-106	asnC	-	-	K	ko:K03718	-	ko00000,ko03000	Transcriptional regulator, AsnC family
PAMIAFPB_01212	2.07e-202	-	5.2.1.8	-	M	ko:K03772,ko:K03773	-	ko00000,ko01000,ko03110	Peptidyl-prolyl cis-trans isomerase
PAMIAFPB_01213	6.64e-136	fklB	5.2.1.8	-	G	ko:K03772,ko:K03773	-	ko00000,ko01000,ko03110	Peptidyl-prolyl cis-trans isomerase
PAMIAFPB_01214	1.02e-169	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PAMIAFPB_01215	1.4e-44	-	-	-	-	-	-	-	-
PAMIAFPB_01216	2.95e-194	-	-	-	Q	-	-	-	COG NOG10855 non supervised orthologous group
PAMIAFPB_01217	0.0	-	-	-	G	-	-	-	unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
PAMIAFPB_01218	5.34e-211	-	-	-	E	-	-	-	COG NOG17363 non supervised orthologous group
PAMIAFPB_01219	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_01220	7.28e-93	-	-	-	S	-	-	-	amine dehydrogenase activity
PAMIAFPB_01221	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_01222	2.52e-232	-	-	-	P	ko:K21572	-	ko00000,ko02000	Psort location OuterMembrane, score
PAMIAFPB_01223	3.06e-62	-	-	-	S	-	-	-	Domain of unknown function (DUF4361)
PAMIAFPB_01224	0.0	-	-	-	M	-	-	-	Belongs to the glycosyl hydrolase 43 family
PAMIAFPB_01225	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 115
PAMIAFPB_01227	3.73e-203	-	-	-	K	ko:K03490	-	ko00000,ko03000	helix_turn_helix, arabinose operon control protein
PAMIAFPB_01228	7.4e-225	-	1.97.1.4	-	C	ko:K04069	-	ko00000,ko01000	4Fe-4S single cluster domain
PAMIAFPB_01229	0.0	-	2.3.1.54	-	C	ko:K00656	ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120	ko00000,ko00001,ko01000	Pyruvate formate lyase-like
PAMIAFPB_01230	4.48e-98	-	-	-	F	-	-	-	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
PAMIAFPB_01231	3.17e-235	-	-	-	EG	ko:K02856	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01232	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_01233	0.0	-	-	-	M	ko:K21572	-	ko00000,ko02000	COG NOG26547 non supervised orthologous group
PAMIAFPB_01234	2.92e-230	-	-	-	-	-	-	-	-
PAMIAFPB_01235	1.34e-301	-	-	-	O	-	-	-	Glycosyl hydrolase family 76
PAMIAFPB_01236	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
PAMIAFPB_01237	5.05e-183	-	-	-	S	-	-	-	Glycosyltransferase, group 2 family protein
PAMIAFPB_01238	9.87e-317	-	-	-	M	-	-	-	Glycosyltransferase, group 1 family protein
PAMIAFPB_01239	3.4e-297	-	1.1.1.336	-	M	ko:K02472	ko00520,ko05111,map00520,map05111	ko00000,ko00001,ko01000	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PAMIAFPB_01240	2.87e-270	epsC	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	UDP-N-acetylglucosamine 2-epimerase
PAMIAFPB_01241	8e-19	-	-	-	K	ko:K07689	ko02020,ko02025,ko02026,ko05111,map02020,map02025,map02026,map05111	ko00000,ko00001,ko00002,ko02022	response regulator
PAMIAFPB_01242	3.02e-190	-	-	-	E	-	-	-	non supervised orthologous group
PAMIAFPB_01243	1.95e-61	-	-	-	M	-	-	-	O-antigen ligase like membrane protein
PAMIAFPB_01248	2.96e-42	-	-	-	S	-	-	-	Sugar-transfer associated ATP-grasp
PAMIAFPB_01249	2.03e-293	-	-	-	S	-	-	-	Sugar-transfer associated ATP-grasp
PAMIAFPB_01250	3e-307	oprM_1	-	-	MU	-	-	-	Efflux transporter, outer membrane factor lipoprotein, NodT family
PAMIAFPB_01251	0.0	bepE_1	-	-	V	ko:K03296	-	ko00000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMIAFPB_01252	3.78e-250	-	-	-	M	ko:K03585	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMIAFPB_01253	1.68e-223	-	-	-	K	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01254	1.23e-294	-	-	-	M	-	-	-	Glycosyl transferases group 1
PAMIAFPB_01255	7.32e-269	-	-	-	M	-	-	-	Glycosyl transferases group 1
PAMIAFPB_01256	7.29e-287	-	-	-	M	-	-	-	Glycosyl transferase 4-like domain
PAMIAFPB_01257	2.6e-257	-	-	-	-	-	-	-	-
PAMIAFPB_01258	0.0	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01259	6.27e-90	-	-	-	S	-	-	-	ORF6N domain
PAMIAFPB_01260	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PAMIAFPB_01261	3.83e-173	-	-	-	K	-	-	-	Peptidase S24-like
PAMIAFPB_01262	4.42e-20	-	-	-	-	-	-	-	-
PAMIAFPB_01263	5.16e-217	-	-	-	L	-	-	-	Domain of unknown function (DUF4373)
PAMIAFPB_01264	1.11e-113	-	-	-	L	-	-	-	COG NOG31286 non supervised orthologous group
PAMIAFPB_01265	1.41e-10	-	-	-	-	-	-	-	-
PAMIAFPB_01266	3.62e-39	-	-	-	-	-	-	-	-
PAMIAFPB_01267	0.0	-	-	-	M	-	-	-	RHS repeat-associated core domain protein
PAMIAFPB_01268	9.21e-66	-	-	-	-	-	-	-	-
PAMIAFPB_01269	3.91e-27	-	-	-	S	-	-	-	Barstar (barnase inhibitor)
PAMIAFPB_01270	0.0	-	-	-	C	ko:K09181	-	ko00000	CoA binding domain protein
PAMIAFPB_01271	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_01272	3.52e-304	-	-	-	S	-	-	-	Tat pathway signal sequence domain protein
PAMIAFPB_01273	1.58e-41	-	-	-	-	-	-	-	-
PAMIAFPB_01274	0.0	-	-	-	S	-	-	-	Tat pathway signal sequence domain protein
PAMIAFPB_01275	0.0	-	-	-	G	-	-	-	COG NOG29805 non supervised orthologous group
PAMIAFPB_01276	2.96e-150	apbE_1	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PAMIAFPB_01277	0.0	-	-	-	S	-	-	-	COG NOG06097 non supervised orthologous group
PAMIAFPB_01278	0.0	-	3.2.1.50	-	G	ko:K01205	ko00531,ko01100,ko04142,map00531,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko04147	Alpha-N-acetylglucosaminidase
PAMIAFPB_01279	0.0	-	-	-	G	-	-	-	exo-alpha-(2->6)-sialidase activity
PAMIAFPB_01280	2.4e-281	-	-	-	S	-	-	-	unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
PAMIAFPB_01281	9.15e-94	-	-	-	L	-	-	-	DNA-binding protein
PAMIAFPB_01282	3.54e-136	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01283	3.26e-63	-	-	-	-	-	-	-	-
PAMIAFPB_01284	1.56e-13	tonB2	-	-	M	ko:K03832	-	ko00000,ko02000	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PAMIAFPB_01287	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 63 C-terminal domain
PAMIAFPB_01289	0.0	-	3.2.1.99	GH43	G	ko:K06113	-	ko00000,ko01000	Domain of unknown function (DUF1735)
PAMIAFPB_01290	6.49e-257	-	-	-	S	-	-	-	IPT TIG domain protein
PAMIAFPB_01291	5.94e-51	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_01292	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_01293	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	Psort location OuterMembrane, score
PAMIAFPB_01294	1.5e-148	-	-	-	S	-	-	-	Domain of unknown function (DUF4361)
PAMIAFPB_01295	3e-261	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 43 family
PAMIAFPB_01296	0.0	-	-	-	S	-	-	-	unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
PAMIAFPB_01297	0.0	csxA_4	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 2 family
PAMIAFPB_01298	0.0	-	-	-	C	-	-	-	FAD dependent oxidoreductase
PAMIAFPB_01299	2.06e-282	-	3.2.1.197	-	G	ko:K21065	-	ko00000,ko01000	beta-1,4-mannooligosaccharide phosphorylase
PAMIAFPB_01300	2.05e-260	-	-	-	S	-	-	-	unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
PAMIAFPB_01302	0.0	-	-	-	O	-	-	-	COG NOG25094 non supervised orthologous group
PAMIAFPB_01303	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 2 family
PAMIAFPB_01304	8.14e-215	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 43 family
PAMIAFPB_01305	2.71e-52	-	-	-	L	-	-	-	Phage integrase SAM-like domain
PAMIAFPB_01306	4.16e-198	-	-	-	L	-	-	-	Phage integrase SAM-like domain
PAMIAFPB_01307	4.11e-209	-	-	-	K	-	-	-	Helix-turn-helix domain
PAMIAFPB_01308	4.71e-235	mraY2	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01309	2.41e-214	-	5.1.3.26	-	M	ko:K19997	-	ko00000,ko01000	Male sterility protein
PAMIAFPB_01310	5.47e-103	-	-	-	K	-	-	-	KOW (Kyprides, Ouzounis, Woese) motif.
PAMIAFPB_01311	1.88e-237	-	2.6.1.33	-	E	ko:K20429	-	ko00000,ko01000	Belongs to the DegT DnrJ EryC1 family
PAMIAFPB_01312	1.06e-140	-	-	-	S	-	-	-	WbqC-like protein family
PAMIAFPB_01313	0.000473	-	-	-	K	-	-	-	-acetyltransferase
PAMIAFPB_01314	1.48e-172	-	-	-	M	-	-	-	Glycosyltransferase, group 2 family
PAMIAFPB_01315	3.71e-149	ispD2	2.7.7.60	-	I	ko:K00991	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
PAMIAFPB_01316	7.99e-195	-	-	-	M	-	-	-	Male sterility protein
PAMIAFPB_01317	4.04e-247	-	-	-	M	-	-	-	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
PAMIAFPB_01318	1.15e-280	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01319	2.76e-200	-	-	-	V	-	-	-	COG NOG25117 non supervised orthologous group
PAMIAFPB_01321	1.55e-117	-	-	-	C	-	-	-	coenzyme F420-reducing hydrogenase beta subunit
PAMIAFPB_01322	5.03e-38	-	-	-	C	-	-	-	Polysaccharide pyruvyl transferase
PAMIAFPB_01323	1.24e-79	-	-	-	M	-	-	-	Glycosyl transferases group 1
PAMIAFPB_01324	1.51e-37	-	-	-	S	-	-	-	Glycosyltransferase, group 2 family protein
PAMIAFPB_01325	8.78e-168	-	-	-	S	-	-	-	Glycosyltransferase WbsX
PAMIAFPB_01326	2.71e-87	-	2.3.1.30	-	E	ko:K00640	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	ko00000,ko00001,ko00002,ko01000	Bacterial transferase hexapeptide (six repeats)
PAMIAFPB_01327	8.14e-180	-	-	-	M	-	-	-	Glycosyl transferase family 8
PAMIAFPB_01328	2.01e-164	-	-	-	M	-	-	-	Capsular polysaccharide synthesis protein
PAMIAFPB_01329	1.46e-161	-	-	-	S	-	-	-	Core-2/I-Branching enzyme
PAMIAFPB_01330	4.15e-157	-	-	-	S	-	-	-	Core-2/I-Branching enzyme
PAMIAFPB_01331	1.03e-208	-	-	-	I	-	-	-	Acyltransferase family
PAMIAFPB_01332	2.26e-169	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PAMIAFPB_01333	8.15e-193	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01334	3.12e-201	-	-	-	M	-	-	-	Glycosyltransferase, group 1 family protein
PAMIAFPB_01335	2.1e-145	-	-	-	M	-	-	-	Glycosyl transferases group 1
PAMIAFPB_01336	5e-243	-	2.4.1.348	GT4	M	ko:K12995	-	ko00000,ko01000,ko01003,ko01005	Glycosyl transferase 4-like
PAMIAFPB_01337	1.57e-154	-	-	-	M	ko:K01991	ko02026,map02026	ko00000,ko00001,ko02000	COG1596 Periplasmic protein involved in polysaccharide export
PAMIAFPB_01338	0.0	-	-	-	DM	-	-	-	Chain length determinant protein
PAMIAFPB_01339	1.11e-282	-	-	-	M	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_01340	4.14e-45	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_01341	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_01342	0.0	-	-	-	H	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_01343	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	non supervised orthologous group
PAMIAFPB_01344	5.07e-304	-	-	-	S	-	-	-	Domain of unknown function (DUF5126)
PAMIAFPB_01345	3.05e-302	-	-	-	S	-	-	-	Domain of unknown function
PAMIAFPB_01347	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 2 family
PAMIAFPB_01348	1.69e-269	-	-	-	G	-	-	-	Alpha-L-fucosidase
PAMIAFPB_01349	0.0	-	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	glycosyl hydrolase, family 3
PAMIAFPB_01351	0.0	-	-	-	G	-	-	-	Glycosyl hydrolases family 43
PAMIAFPB_01352	0.0	-	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
PAMIAFPB_01353	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_01354	4.82e-256	-	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Converts alpha-aldose to the beta-anomer
PAMIAFPB_01355	7.16e-300	-	-	-	S	-	-	-	aa) fasta scores E()
PAMIAFPB_01356	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
PAMIAFPB_01357	0.0	comM	-	-	O	ko:K07391	-	ko00000	Magnesium chelatase, subunit ChlI
PAMIAFPB_01358	3.7e-259	-	-	-	CO	-	-	-	AhpC TSA family
PAMIAFPB_01359	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
PAMIAFPB_01360	1.53e-55	xerC	-	-	D	ko:K04763	-	ko00000,ko03036	Tyrosine recombinase XerC
PAMIAFPB_01361	8.48e-140	xerC	-	-	D	ko:K04763	-	ko00000,ko03036	Tyrosine recombinase XerC
PAMIAFPB_01362	9.8e-97	aroQ	4.2.1.10	-	E	ko:K03786	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes a trans-dehydration via an enolate intermediate
PAMIAFPB_01363	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Pyruvate kinase
PAMIAFPB_01364	1.3e-152	mdmC	2.1.1.104	-	S	ko:K00588	ko00360,ko00940,ko00941,ko00945,ko01100,ko01110,map00360,map00940,map00941,map00945,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_01365	5.86e-68	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PAMIAFPB_01366	2.73e-282	lolE	-	-	M	ko:K09808,ko:K09815	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG4591 ABC-type transport system, involved in lipoprotein release, permease component
PAMIAFPB_01367	2.28e-249	oorB	1.2.7.11, 1.2.7.3	-	C	ko:K00175	ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin
PAMIAFPB_01368	0.0	porA	1.2.7.11, 1.2.7.3	-	C	ko:K00174	ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	2-oxoacid acceptor oxidoreductase, alpha subunit
PAMIAFPB_01370	0.0	secD	-	-	U	ko:K03072,ko:K12257	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
PAMIAFPB_01371	0.0	dcp	3.4.15.5	-	E	ko:K01284	-	ko00000,ko01000,ko01002	Peptidase family M3
PAMIAFPB_01372	2.31e-257	-	-	-	L	-	-	-	Endonuclease Exonuclease phosphatase family
PAMIAFPB_01373	2e-209	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01374	2.32e-161	-	3.4.21.105	-	S	ko:K09650	-	ko00000,ko01000,ko01002,ko03029	Psort location CytoplasmicMembrane, score
PAMIAFPB_01375	9.33e-49	hupB	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PAMIAFPB_01376	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Psort location Cytoplasmic, score
PAMIAFPB_01377	0.0	-	-	-	S	-	-	-	COG NOG28036 non supervised orthologous group
PAMIAFPB_01378	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PAMIAFPB_01379	0.0	-	-	-	T	-	-	-	COG COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
PAMIAFPB_01380	4.81e-252	-	3.2.1.14	GH18	G	ko:K01183	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Glyco_18
PAMIAFPB_01381	7.74e-282	-	-	-	G	-	-	-	Domain of unknown function (DUF4971)
PAMIAFPB_01382	0.0	-	-	-	U	-	-	-	Putative binding domain, N-terminal
PAMIAFPB_01383	0.0	-	-	-	S	-	-	-	Putative binding domain, N-terminal
PAMIAFPB_01384	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_01385	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_01386	0.0	-	-	-	P	-	-	-	SusD family
PAMIAFPB_01387	0.0	-	-	-	H	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_01388	0.0	-	-	-	H	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_01389	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
PAMIAFPB_01391	1.46e-128	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
PAMIAFPB_01392	1.09e-222	-	4.3.3.7	-	H	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
PAMIAFPB_01393	0.0	-	-	-	E	ko:K03307	-	ko00000	alkaline phosphatase synthesis sensor protein phoR K07636
PAMIAFPB_01394	7.09e-136	ahpC	1.11.1.15	-	O	ko:K03386	ko04214,map04214	ko00000,ko00001,ko01000,ko04147	Psort location Cytoplasmic, score
PAMIAFPB_01395	0.0	ahpF	-	-	C	ko:K03387	-	ko00000,ko01000	alkyl hydroperoxide reductase subunit F
PAMIAFPB_01396	0.0	-	-	-	S	-	-	-	phosphatase family
PAMIAFPB_01397	6.17e-237	-	-	-	G	ko:K05340	-	ko00000,ko02000	COG NOG04879 non supervised orthologous group
PAMIAFPB_01398	8.91e-248	-	-	-	F	-	-	-	Inosine-uridine preferring nucleoside hydrolase
PAMIAFPB_01399	0.0	-	-	-	G	-	-	-	Domain of unknown function (DUF4978)
PAMIAFPB_01400	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_01401	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_01402	6.23e-170	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PAMIAFPB_01403	4e-17	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PAMIAFPB_01404	6.24e-219	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PAMIAFPB_01405	0.0	-	-	-	-	-	-	-	-
PAMIAFPB_01406	9.07e-199	suhB	3.1.3.25	-	G	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_01407	2.82e-172	comF	2.4.2.14	-	S	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	ComF family
PAMIAFPB_01410	5.46e-233	-	-	-	G	-	-	-	Kinase, PfkB family
PAMIAFPB_01411	0.0	prc	3.4.21.102	-	M	ko:K03797	-	ko00000,ko01000,ko01002	Belongs to the peptidase S41A family
PAMIAFPB_01412	0.0	-	-	-	T	-	-	-	Psort location CytoplasmicMembrane, score 7.88
PAMIAFPB_01413	0.0	ahcY	3.3.1.1	-	H	ko:K01251	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000,ko01009,ko04147	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
PAMIAFPB_01414	0.0	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01415	0.0	-	-	-	MU	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_01416	1.08e-247	-	-	-	V	ko:K03543	-	ko00000,ko00002,ko02000	Auxiliary transport protein, membrane fusion protein (MFP) family protein
PAMIAFPB_01417	0.0	-	-	-	EGP	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01418	4e-174	-	-	-	K	-	-	-	methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC XylS family)
PAMIAFPB_01419	4.68e-153	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	uracil phosphoribosyltransferase
PAMIAFPB_01420	0.0	pckA	4.1.1.49	-	H	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
PAMIAFPB_01421	7.04e-121	-	-	-	P	ko:K07240	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score
PAMIAFPB_01422	1.24e-120	-	-	-	P	ko:K07240	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score
PAMIAFPB_01423	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
PAMIAFPB_01424	1.68e-55	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PAMIAFPB_01425	2.75e-130	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
PAMIAFPB_01426	0.0	-	-	-	IQ	ko:K00666	-	ko00000,ko01000,ko01004	Psort location Cytoplasmic, score 9.97
PAMIAFPB_01427	2.75e-269	manC	2.7.7.13	-	M	ko:K00971	ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110	ko00000,ko00001,ko00002,ko01000	mannose-1-phosphate guanylyltransferase
PAMIAFPB_01429	1.78e-285	-	-	-	S	ko:K07148	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01430	8.08e-188	-	-	-	H	-	-	-	Methyltransferase domain
PAMIAFPB_01431	0.0	-	-	-	K	ko:K03088	-	ko00000,ko03021	Outer membrane protein beta-barrel domain
PAMIAFPB_01432	0.0	-	-	-	S	-	-	-	Dynamin family
PAMIAFPB_01433	3.3e-262	-	-	-	S	-	-	-	UPF0283 membrane protein
PAMIAFPB_01434	0.0	-	-	-	S	-	-	-	Domain of unknonw function from B. Theta Gene description (DUF3874)
PAMIAFPB_01435	0.0	-	-	-	OT	-	-	-	Forkhead associated domain
PAMIAFPB_01436	4.6e-138	-	-	-	T	-	-	-	Inner membrane component of T3SS, cytoplasmic domain
PAMIAFPB_01437	0.0	-	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	Serine/threonine phosphatases, family 2C, catalytic domain
PAMIAFPB_01438	0.0	-	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	Protein tyrosine kinase
PAMIAFPB_01439	2.61e-127	-	-	-	T	-	-	-	ATPase activity
PAMIAFPB_01440	0.0	-	2.7.11.1	-	KLMT	ko:K12132	-	ko00000,ko01000,ko01001	Protein tyrosine kinase
PAMIAFPB_01441	1.23e-227	-	-	-	-	-	-	-	-
PAMIAFPB_01448	3.82e-157	-	-	-	M	ko:K03832	-	ko00000,ko02000	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PAMIAFPB_01449	1.35e-154	-	-	-	S	-	-	-	COG NOG23394 non supervised orthologous group
PAMIAFPB_01450	1.05e-132	yvqK	2.5.1.17	-	S	ko:K00798	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Conserved protein
PAMIAFPB_01451	9.33e-48	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01452	2.55e-291	-	-	-	M	-	-	-	Phosphate-selective porin O and P
PAMIAFPB_01453	5.99e-244	ansB	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the asparaginase 1 family
PAMIAFPB_01454	7.19e-283	dcuB	-	-	S	ko:K07791,ko:K07792	ko02020,map02020	ko00000,ko00001,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01455	0.0	aspA	4.3.1.1	-	E	ko:K01744	ko00250,ko01100,map00250,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 9.97
PAMIAFPB_01456	4.56e-244	-	-	-	S	-	-	-	SMI1-KNR4 cell-wall
PAMIAFPB_01457	1.59e-136	-	-	-	M	-	-	-	COG NOG27749 non supervised orthologous group
PAMIAFPB_01458	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PAMIAFPB_01459	0.0	-	-	-	G	-	-	-	Domain of unknown function (DUF4091)
PAMIAFPB_01460	4.49e-112	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PAMIAFPB_01461	0.0	-	-	-	S	ko:K07037	-	ko00000	7TM receptor with intracellular HD hydrolase
PAMIAFPB_01462	0.0	gltX	6.1.1.17	-	J	ko:K01885	ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PAMIAFPB_01463	4.02e-304	waaA	2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15	GT30	M	ko:K02527	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01464	3.58e-96	dapH	-	-	S	-	-	-	Bacterial transferase hexapeptide repeat protein
PAMIAFPB_01465	0.0	-	3.4.11.9	-	E	ko:K01262	-	ko00000,ko01000,ko01002	COG0006 Xaa-Pro aminopeptidase
PAMIAFPB_01466	6.01e-33	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
PAMIAFPB_01467	1.63e-200	xerC	-	-	D	ko:K03733	-	ko00000,ko03036	Belongs to the 'phage' integrase family. XerC subfamily
PAMIAFPB_01468	3.07e-58	raiA	-	-	J	ko:K05808	-	ko00000,ko03009	Ribosomal subunit interface protein
PAMIAFPB_01473	3.77e-291	tuf	-	-	J	ko:K02358	-	ko00000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PAMIAFPB_01475	2.04e-122	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
PAMIAFPB_01476	7.31e-100	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PAMIAFPB_01477	8.31e-159	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PAMIAFPB_01478	4.02e-116	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L10
PAMIAFPB_01479	1.78e-71	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PAMIAFPB_01480	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAMIAFPB_01481	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAMIAFPB_01482	6.63e-63	-	-	-	T	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01483	1.01e-87	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PAMIAFPB_01484	1.89e-105	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PAMIAFPB_01485	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PAMIAFPB_01486	6.63e-63	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
PAMIAFPB_01487	3.88e-146	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PAMIAFPB_01488	6.14e-140	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
PAMIAFPB_01489	1.55e-61	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PAMIAFPB_01490	5.46e-194	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PAMIAFPB_01491	5.19e-59	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PAMIAFPB_01492	2.53e-88	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PAMIAFPB_01493	3.11e-164	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PAMIAFPB_01494	9.31e-97	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PAMIAFPB_01495	1.75e-35	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
PAMIAFPB_01496	1.13e-52	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PAMIAFPB_01497	3.37e-79	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PAMIAFPB_01498	2.35e-67	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PAMIAFPB_01499	8.57e-122	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PAMIAFPB_01500	2.73e-61	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PAMIAFPB_01501	1.74e-88	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PAMIAFPB_01502	5.81e-131	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PAMIAFPB_01503	4.05e-70	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PAMIAFPB_01504	1.29e-112	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PAMIAFPB_01505	2.9e-31	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	50S ribosomal protein L30
PAMIAFPB_01506	3.46e-94	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	binds to the 23S rRNA
PAMIAFPB_01507	2.69e-311	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PAMIAFPB_01508	1.91e-194	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Psort location Cytoplasmic, score
PAMIAFPB_01509	1.98e-44	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PAMIAFPB_01510	1.06e-18	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
PAMIAFPB_01511	1.77e-81	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PAMIAFPB_01512	7.13e-87	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PAMIAFPB_01513	2.53e-140	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PAMIAFPB_01514	6.88e-232	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAMIAFPB_01515	8.85e-102	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
PAMIAFPB_01516	3e-89	-	-	-	S	-	-	-	COG NOG31702 non supervised orthologous group
PAMIAFPB_01517	3.52e-118	-	-	-	S	-	-	-	COG NOG27987 non supervised orthologous group
PAMIAFPB_01518	0.0	mutS_2	-	-	L	-	-	-	DNA mismatch repair protein MutS
PAMIAFPB_01519	1.06e-156	-	-	-	S	-	-	-	COG NOG29571 non supervised orthologous group
PAMIAFPB_01520	0.0	hutU	4.2.1.49	-	H	ko:K01712	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
PAMIAFPB_01521	7.59e-214	ftcD	2.1.2.5, 4.3.1.4	-	E	ko:K00603,ko:K13990	ko00340,ko00670,ko01100,map00340,map00670,map01100	ko00000,ko00001,ko01000,ko03036,ko04147	Glutamate formiminotransferase
PAMIAFPB_01522	2.42e-301	hutI	3.5.2.7	-	F	ko:K01468	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Imidazolone-5-propionate hydrolase
PAMIAFPB_01523	6.82e-133	fchA	-	-	E	-	-	-	COG3404 Methenyl tetrahydrofolate cyclohydrolase
PAMIAFPB_01524	0.0	hutH	4.3.1.3	-	E	ko:K01745	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Histidine ammonia-lyase
PAMIAFPB_01525	5.16e-41	-	-	-	K	-	-	-	transcriptional regulator, TetR family
PAMIAFPB_01526	4.23e-92	-	-	-	K	-	-	-	transcriptional regulator, TetR family
PAMIAFPB_01527	1.04e-304	-	-	-	MU	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_01528	4.17e-237	-	-	-	M	ko:K03585	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMIAFPB_01529	0.0	czcA	-	-	V	ko:K03296	-	ko00000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMIAFPB_01530	3.76e-67	-	-	-	E	-	-	-	COG NOG19114 non supervised orthologous group
PAMIAFPB_01531	2e-170	-	-	-	E	-	-	-	COG COG2755 Lysophospholipase L1 and related esterases
PAMIAFPB_01532	2.04e-150	-	-	-	E	-	-	-	COG COG2755 Lysophospholipase L1 and related esterases
PAMIAFPB_01533	7.51e-211	-	-	-	E	-	-	-	COG NOG14456 non supervised orthologous group
PAMIAFPB_01534	7.37e-306	algI	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01535	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
PAMIAFPB_01536	6.48e-244	gpr	-	-	C	ko:K19265	-	ko00000,ko01000	Oxidoreductase, aldo keto reductase family protein
PAMIAFPB_01538	3.25e-112	-	-	-	-	-	-	-	-
PAMIAFPB_01539	1.58e-152	-	-	-	S	-	-	-	Outer membrane protein beta-barrel domain
PAMIAFPB_01540	3.5e-164	-	-	-	-	-	-	-	-
PAMIAFPB_01543	6.49e-94	-	-	-	-	-	-	-	-
PAMIAFPB_01544	5.35e-176	exbB	-	-	U	ko:K03561	-	ko00000,ko02000	MotA TolQ ExbB proton channel family
PAMIAFPB_01545	1.57e-134	exbD1	-	-	U	-	-	-	Biopolymer transport protein ExbD/TolR
PAMIAFPB_01546	1.96e-145	exbD2	-	-	U	-	-	-	Biopolymer transport protein ExbD/TolR
PAMIAFPB_01547	6.56e-184	tonB2	-	-	U	ko:K03832	-	ko00000,ko02000	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PAMIAFPB_01548	6.55e-224	-	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	COG0226 ABC-type phosphate transport system, periplasmic component
PAMIAFPB_01549	3.61e-315	-	-	-	S	-	-	-	tetratricopeptide repeat
PAMIAFPB_01550	0.0	-	-	-	G	-	-	-	alpha-galactosidase
PAMIAFPB_01554	1.22e-149	-	-	-	M	-	-	-	Protein of unknown function (DUF3575)
PAMIAFPB_01555	1.86e-315	-	-	-	U	-	-	-	COG0457 FOG TPR repeat
PAMIAFPB_01556	0.0	-	-	-	S	-	-	-	Major fimbrial subunit protein type IV, Fimbrillin, C-terminal
PAMIAFPB_01557	4.6e-250	-	-	-	S	-	-	-	COG NOG32009 non supervised orthologous group
PAMIAFPB_01558	6.4e-260	-	-	-	-	-	-	-	-
PAMIAFPB_01559	0.0	-	-	-	-	-	-	-	-
PAMIAFPB_01560	2.55e-289	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_01562	1.54e-289	-	-	-	T	-	-	-	Histidine kinase-like ATPases
PAMIAFPB_01563	0.0	gadC	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01564	1.47e-156	-	-	-	P	ko:K10716	-	ko00000,ko02000	Ion channel
PAMIAFPB_01565	9.39e-230	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
PAMIAFPB_01566	0.0	gadB	4.1.1.15, 4.1.2.27	-	E	ko:K01580,ko:K01634	ko00250,ko00410,ko00430,ko00600,ko00650,ko01100,ko01110,ko01120,ko02024,ko04071,ko04727,ko04940,map00250,map00410,map00430,map00600,map00650,map01100,map01110,map01120,map02024,map04071,map04727,map04940	ko00000,ko00001,ko00002,ko01000	Belongs to the group II decarboxylase family
PAMIAFPB_01568	6.74e-117	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PAMIAFPB_01569	6.15e-280	-	-	-	P	-	-	-	Transporter, major facilitator family protein
PAMIAFPB_01570	2.73e-210	-	-	-	EG	-	-	-	COG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PAMIAFPB_01571	7.27e-86	hinT	-	-	FG	ko:K02503	-	ko00000,ko04147	COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family
PAMIAFPB_01572	5.65e-96	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PAMIAFPB_01573	3.26e-275	-	-	-	O	-	-	-	COG NOG14454 non supervised orthologous group
PAMIAFPB_01574	0.0	pnp	2.7.7.8	-	J	ko:K00962	ko00230,ko00240,ko03018,map00230,map00240,map03018	ko00000,ko00001,ko00002,ko01000,ko03016,ko03019	Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
PAMIAFPB_01575	7.81e-98	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
PAMIAFPB_01576	2.12e-226	-	-	-	PT	-	-	-	Sigma factor regulatory protein, FecR PupR family
PAMIAFPB_01577	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_01578	0.0	-	-	-	S	-	-	-	COG NOG26858 non supervised orthologous group
PAMIAFPB_01579	3.63e-66	-	-	-	-	-	-	-	-
PAMIAFPB_01581	1.59e-94	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PAMIAFPB_01582	0.0	-	-	-	H	-	-	-	COG NOG08812 non supervised orthologous group
PAMIAFPB_01583	4.83e-255	buk	2.7.2.7	-	H	ko:K00929	ko00650,ko01100,map00650,map01100	ko00000,ko00001,ko01000	Belongs to the acetokinase family
PAMIAFPB_01584	5.22e-228	-	2.3.1.19, 2.3.1.8	-	C	ko:K00625,ko:K00634	ko00430,ko00620,ko00640,ko00650,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00650,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_01585	1.84e-215	ykfA	3.4.17.13	-	V	ko:K01297	-	ko00000,ko01000,ko01002,ko01011	proteins, homologs of microcin C7 resistance protein MccF
PAMIAFPB_01586	2.28e-251	ywaD	-	-	S	-	-	-	glutaminyl-peptide cyclotransferase (glutaminyl cyclase) K00683
PAMIAFPB_01587	1.19e-93	sufE	-	-	S	ko:K02426	-	ko00000	COG2166 SufE protein probably involved in Fe-S center assembly
PAMIAFPB_01588	5.72e-33	-	-	-	K	ko:K07727	-	ko00000,ko03000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01589	1.82e-146	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_01590	2.65e-177	-	-	-	S	ko:K07052	-	ko00000	CAAX amino terminal protease family
PAMIAFPB_01592	1.36e-226	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	riboflavin biosynthesis protein
PAMIAFPB_01593	2.08e-151	yihX	3.1.3.10, 3.1.3.104	-	S	ko:K07025,ko:K20866,ko:K21063	ko00010,ko00740,ko01100,ko01110,ko01120,map00010,map00740,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01594	0.0	yoaB	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01595	4.16e-272	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
PAMIAFPB_01596	8.53e-38	rubR	-	-	C	-	-	-	Psort location Cytoplasmic, score
PAMIAFPB_01597	3.12e-105	-	-	-	L	-	-	-	DNA-binding protein
PAMIAFPB_01598	4.17e-83	-	-	-	-	-	-	-	-
PAMIAFPB_01600	5.51e-142	-	-	-	L	-	-	-	COG NOG29822 non supervised orthologous group
PAMIAFPB_01601	7.91e-216	-	-	-	S	-	-	-	Pfam:DUF5002
PAMIAFPB_01602	0.0	-	-	-	M	ko:K21572	-	ko00000,ko02000	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
PAMIAFPB_01603	0.0	-	-	-	P	-	-	-	TonB dependent receptor
PAMIAFPB_01604	0.0	-	-	-	S	-	-	-	NHL repeat
PAMIAFPB_01605	6.72e-268	-	3.1.3.97	-	S	ko:K07053	-	ko00000,ko01000	Domain of unknown function
PAMIAFPB_01606	0.0	-	-	-	P	ko:K03324	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01607	0.0	udk2	2.7.1.48	-	FJ	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Phosphoribulokinase Uridine kinase family
PAMIAFPB_01608	2.27e-98	-	-	-	-	-	-	-	-
PAMIAFPB_01609	0.0	-	-	-	Q	-	-	-	COG3458 Acetyl esterase (deacetylase)
PAMIAFPB_01610	0.0	-	3.2.1.40	-	G	ko:K05989	-	ko00000,ko01000	COG NOG04002 non supervised orthologous group
PAMIAFPB_01611	0.0	-	3.2.1.40	-	G	ko:K05989	-	ko00000,ko01000	Alpha-L-rhamnosidase N-terminal domain protein
PAMIAFPB_01612	0.0	pepP	3.4.11.9	-	E	ko:K01262	-	ko00000,ko01000,ko01002	Psort location Cytoplasmic, score
PAMIAFPB_01613	1.67e-49	-	-	-	S	-	-	-	HicB family
PAMIAFPB_01614	4.61e-37	-	-	-	S	-	-	-	HicA toxin of bacterial toxin-antitoxin,
PAMIAFPB_01615	0.0	-	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	DNA helicase
PAMIAFPB_01616	0.0	rpoN	-	-	K	ko:K03092	ko02020,ko05111,map02020,map05111	ko00000,ko00001,ko03021	COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog
PAMIAFPB_01617	3.38e-149	-	-	-	I	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01618	2.82e-87	gcvH	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
PAMIAFPB_01619	6.12e-106	purE	5.4.99.18	-	F	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PAMIAFPB_01620	0.0	ispG	1.17.7.1, 1.17.7.3	-	I	ko:K03526	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
PAMIAFPB_01621	2.99e-151	-	-	-	-	-	-	-	-
PAMIAFPB_01622	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
PAMIAFPB_01623	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01624	2.71e-98	-	-	-	P	ko:K03711	-	ko00000,ko03000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01625	7.56e-242	mdh	1.1.1.37	-	C	ko:K00024	ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the LDH MDH superfamily
PAMIAFPB_01626	0.0	-	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	glycosyl hydrolase, family 3
PAMIAFPB_01627	1.38e-186	-	-	-	G	-	-	-	Psort location Extracellular, score
PAMIAFPB_01628	4.26e-208	-	-	-	-	-	-	-	-
PAMIAFPB_01629	4.51e-301	-	-	-	S	ko:K21572	-	ko00000,ko02000	Pfam:SusD
PAMIAFPB_01630	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_01631	0.0	-	-	-	KT	-	-	-	COG NOG11230 non supervised orthologous group
PAMIAFPB_01632	3.32e-202	yitL	-	-	S	ko:K00243	-	ko00000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01633	6.64e-162	-	-	-	J	-	-	-	Domain of unknown function (DUF4476)
PAMIAFPB_01634	1.46e-237	-	-	-	J	-	-	-	Domain of unknown function (DUF4476)
PAMIAFPB_01635	3.4e-152	-	-	-	S	-	-	-	COG NOG36047 non supervised orthologous group
PAMIAFPB_01636	0.0	pbpF	-	-	M	-	-	-	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
PAMIAFPB_01637	1.58e-122	-	-	-	S	-	-	-	COG NOG29882 non supervised orthologous group
PAMIAFPB_01638	2.79e-253	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PAMIAFPB_01639	1.85e-301	-	-	-	MU	ko:K12340	ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133	ko00000,ko00001,ko00002,ko01504,ko02000,ko02044	Psort location OuterMembrane, score 10.00
PAMIAFPB_01640	3.07e-244	-	-	-	M	ko:K02005	-	ko00000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMIAFPB_01641	2.7e-296	macB_3	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	Efflux ABC transporter, permease protein
PAMIAFPB_01642	1.47e-303	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	Efflux ABC transporter, permease protein
PAMIAFPB_01643	9.38e-168	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAMIAFPB_01644	2.05e-231	glk	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 9.26
PAMIAFPB_01645	1.49e-106	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
PAMIAFPB_01646	9.98e-134	-	-	-	-	-	-	-	-
PAMIAFPB_01647	4e-76	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PAMIAFPB_01648	8.02e-228	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_01649	0.0	-	-	-	S	-	-	-	Domain of unknown function
PAMIAFPB_01650	1.7e-261	-	-	-	M	-	-	-	COG2885 Outer membrane protein and related peptidoglycan-associated
PAMIAFPB_01651	1.47e-209	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_01652	0.0	-	-	-	N	-	-	-	bacterial-type flagellum assembly
PAMIAFPB_01653	2.4e-256	-	-	-	M	-	-	-	COG2885 Outer membrane protein and related peptidoglycan-associated
PAMIAFPB_01654	3.45e-187	ushA	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	5'-nucleotidase, C-terminal domain
PAMIAFPB_01655	1.13e-217	-	3.1.3.5, 3.6.1.45	-	F	ko:K01081,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Ser Thr phosphatase family protein
PAMIAFPB_01656	0.0	nagA	-	-	G	-	-	-	b-glycosidase, glycoside hydrolase family 3 protein
PAMIAFPB_01657	3.46e-155	-	-	-	M	-	-	-	COG NOG27406 non supervised orthologous group
PAMIAFPB_01658	3.3e-145	-	-	-	S	-	-	-	COG NOG26965 non supervised orthologous group
PAMIAFPB_01659	0.0	-	-	-	S	-	-	-	PS-10 peptidase S37
PAMIAFPB_01660	1.42e-76	-	-	-	K	-	-	-	Transcriptional regulator, MarR
PAMIAFPB_01661	0.0	cdr	-	-	P	-	-	-	Belongs to the sulfur carrier protein TusA family
PAMIAFPB_01662	0.0	-	-	-	T	ko:K02481	-	ko00000,ko02022	acetoacetate metabolism regulatory protein AtoC
PAMIAFPB_01663	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 2 family
PAMIAFPB_01664	2.57e-293	-	2.7.1.1	-	G	ko:K00844	ko00010,ko00051,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04910,ko04930,ko04973,ko05230,map00010,map00051,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200,map04066,map04910,map04930,map04973,map05230	ko00000,ko00001,ko00002,ko01000,ko04131	Hexokinase
PAMIAFPB_01668	2.44e-129	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01669	3.5e-40	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
PAMIAFPB_01670	1.15e-240	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PAMIAFPB_01671	1.11e-207	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PAMIAFPB_01672	6.37e-314	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
PAMIAFPB_01673	6.08e-177	lptB	-	-	S	ko:K06861	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Psort location Cytoplasmic, score 9.12
PAMIAFPB_01674	2.1e-164	mlaE	-	-	Q	ko:K02066	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01675	2.49e-181	metN	-	-	Q	ko:K02065	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PAMIAFPB_01676	1.2e-49	-	-	-	S	-	-	-	COG COG0724 RNA-binding proteins (RRM domain)
PAMIAFPB_01677	1.5e-310	tig	-	-	O	ko:K03545	-	ko00000	peptidyl-prolyl cis-trans isomerase (trigger factor)
PAMIAFPB_01678	7.17e-154	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PAMIAFPB_01679	1.69e-295	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PAMIAFPB_01680	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
PAMIAFPB_01681	0.0	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
PAMIAFPB_01682	0.0	-	5.2.1.8	-	M	ko:K03771	-	ko00000,ko01000,ko03110	COG COG0760 Parvulin-like peptidyl-prolyl isomerase
PAMIAFPB_01683	9.89e-201	-	-	-	O	-	-	-	COG NOG23400 non supervised orthologous group
PAMIAFPB_01684	0.0	surA	5.2.1.8	-	M	ko:K03771	-	ko00000,ko01000,ko03110	peptidylprolyl isomerase
PAMIAFPB_01685	0.0	lptD	-	-	M	-	-	-	COG NOG06415 non supervised orthologous group
PAMIAFPB_01686	1.34e-66	-	-	-	S	-	-	-	COG NOG23401 non supervised orthologous group
PAMIAFPB_01687	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PAMIAFPB_01688	8.17e-286	-	-	-	M	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_01689	0.0	-	-	-	T	-	-	-	COG NOG26059 non supervised orthologous group
PAMIAFPB_01690	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_01691	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_01692	5.25e-166	-	-	-	S	-	-	-	Protein of unknown function (DUF3823)
PAMIAFPB_01693	0.0	-	-	-	K	-	-	-	DNA-templated transcription, initiation
PAMIAFPB_01694	0.0	-	-	-	G	-	-	-	cog cog3537
PAMIAFPB_01695	0.0	-	-	-	K	-	-	-	GxGYxY sequence motif in domain of unknown function N-terminal
PAMIAFPB_01696	4.8e-253	-	-	-	S	-	-	-	Domain of unknown function (DUF4972)
PAMIAFPB_01697	2.15e-283	-	-	-	S	-	-	-	Domain of unknown function (DUF4972)
PAMIAFPB_01698	8.25e-298	-	3.2.1.130, 3.2.1.198	GH99	S	ko:K21132	-	ko00000,ko01000	Glycosyl hydrolase family 99
PAMIAFPB_01699	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2339)
PAMIAFPB_01700	5.13e-268	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
PAMIAFPB_01702	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ)
PAMIAFPB_01703	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain protein
PAMIAFPB_01704	5.43e-181	yaaA	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
PAMIAFPB_01705	4.44e-123	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
PAMIAFPB_01708	0.0	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_01709	1.54e-233	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
PAMIAFPB_01710	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Psort location Cytoplasmic, score
PAMIAFPB_01711	8.6e-118	-	-	-	S	-	-	-	COG NOG27649 non supervised orthologous group
PAMIAFPB_01712	2.33e-108	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PAMIAFPB_01713	1.02e-81	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
PAMIAFPB_01714	2.67e-187	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
PAMIAFPB_01715	3.5e-225	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PAMIAFPB_01716	7.79e-78	-	-	-	J	ko:K03113	ko03013,map03013	ko00000,ko00001,ko03012	COG0023 Translation initiation factor 1 (eIF-1 SUI1) and related
PAMIAFPB_01717	0.0	-	-	-	S	-	-	-	Carboxypeptidase regulatory-like domain
PAMIAFPB_01718	3.17e-157	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PAMIAFPB_01719	1.53e-147	fahA	-	-	Q	-	-	-	2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, fumarylacetoacetate hydrolase family K01828
PAMIAFPB_01720	1.09e-109	ispF	4.6.1.12	-	H	ko:K01770	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
PAMIAFPB_01721	7.35e-250	-	-	-	S	-	-	-	Ser Thr phosphatase family protein
PAMIAFPB_01722	3.08e-209	-	-	-	S	-	-	-	COG NOG24904 non supervised orthologous group
PAMIAFPB_01723	6.01e-260	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PAMIAFPB_01724	0.0	aprN	-	-	M	-	-	-	Belongs to the peptidase S8 family
PAMIAFPB_01725	9.1e-281	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PAMIAFPB_01726	1.76e-13	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PAMIAFPB_01727	8.01e-256	ilvE	2.6.1.42	-	EH	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	COG0115 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase
PAMIAFPB_01728	4.48e-137	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
PAMIAFPB_01729	2.44e-209	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PAMIAFPB_01730	9.83e-259	mrp	-	-	D	ko:K03593	-	ko00000,ko03029,ko03036	Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
PAMIAFPB_01731	0.0	-	-	-	CO	-	-	-	COG NOG24773 non supervised orthologous group
PAMIAFPB_01732	1.15e-62	-	-	-	CO	-	-	-	COG NOG24773 non supervised orthologous group
PAMIAFPB_01733	0.0	-	-	-	U	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PAMIAFPB_01734	2.46e-81	-	-	-	K	-	-	-	Transcriptional regulator
PAMIAFPB_01735	2.09e-130	-	-	-	M	-	-	-	COG NOG19089 non supervised orthologous group
PAMIAFPB_01736	2e-301	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01737	4.89e-282	-	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01738	1.46e-217	-	-	-	M	ko:K01993	-	ko00000	Auxiliary transport protein, membrane fusion protein (MFP) family protein
PAMIAFPB_01739	0.0	-	-	-	MU	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_01741	0.0	-	-	-	S	-	-	-	SWIM zinc finger
PAMIAFPB_01742	0.0	-	-	-	G	-	-	-	TRAP-type C4-dicarboxylate transport system periplasmic component
PAMIAFPB_01743	2.47e-251	-	-	-	S	-	-	-	AAA domain (dynein-related subfamily)
PAMIAFPB_01744	0.0	-	-	-	-	-	-	-	-
PAMIAFPB_01745	6.21e-265	-	-	-	S	-	-	-	VWA domain containing CoxE-like protein
PAMIAFPB_01746	1.66e-219	mdh	1.1.1.37	-	C	ko:K00024	ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible oxidation of malate to oxaloacetate
PAMIAFPB_01747	1.04e-190	-	-	-	S	-	-	-	COG NOG11650 non supervised orthologous group
PAMIAFPB_01748	4.42e-132	-	-	-	S	-	-	-	Domain of unknown function (DUF5034)
PAMIAFPB_01749	1.31e-214	-	-	-	-	-	-	-	-
PAMIAFPB_01750	1.7e-206	nadK	2.7.1.23	-	H	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PAMIAFPB_01751	8.82e-170	pdxJ	2.6.99.2	-	H	ko:K03474	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
PAMIAFPB_01752	1.09e-162	exbB	-	-	U	ko:K03561	-	ko00000,ko02000	MotA TolQ ExbB proton channel family
PAMIAFPB_01753	3.08e-81	-	-	-	U	ko:K03559	-	ko00000,ko02000	Transport energizing protein, ExbD TolR family
PAMIAFPB_01754	2.05e-159	-	-	-	M	-	-	-	TonB family domain protein
PAMIAFPB_01755	6.84e-127	yajL	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	Psort location Cytoplasmic, score
PAMIAFPB_01756	7.75e-153	ispD	2.7.7.60	-	I	ko:K00991	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
PAMIAFPB_01757	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PAMIAFPB_01758	8.41e-107	ndk	2.7.4.6	-	F	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	ko00000,ko00001,ko00002,ko01000,ko04131	Nucleoside diphosphate kinase
PAMIAFPB_01759	5.55e-211	mepM_1	-	-	M	-	-	-	Peptidase, M23
PAMIAFPB_01760	3.31e-123	-	-	-	S	-	-	-	COG NOG27206 non supervised orthologous group
PAMIAFPB_01761	3.02e-294	doxX	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_01762	3.97e-176	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PAMIAFPB_01763	4.38e-102	-	-	-	S	-	-	-	Sporulation and cell division repeat protein
PAMIAFPB_01764	8.21e-139	folE	3.5.4.16	-	F	ko:K01495	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	GTP cyclohydrolase I
PAMIAFPB_01765	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PAMIAFPB_01766	2.21e-180	tyrA	1.3.1.12	-	E	ko:K00210	ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	prephenate dehydrogenase
PAMIAFPB_01767	1.83e-259	pheB	5.4.99.5	-	E	ko:K04516	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01768	1.32e-295	dapL	2.6.1.83	-	E	ko:K10206,ko:K14261	ko00300,ko01100,ko01110,ko01130,ko01230,map00300,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	COG0436 Aspartate tyrosine aromatic aminotransferase
PAMIAFPB_01769	1.07e-204	pheA	4.2.1.51	-	E	ko:K04518	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_01770	9.64e-172	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01771	0.0	recQ2	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
PAMIAFPB_01772	1.93e-260	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	single-stranded-DNA-specific exonuclease recJ
PAMIAFPB_01773	7.37e-122	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	single-stranded-DNA-specific exonuclease recJ
PAMIAFPB_01774	5.64e-200	-	-	-	G	-	-	-	COG COG4632 Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase
PAMIAFPB_01775	3.24e-102	-	-	-	S	ko:K07107	-	ko00000,ko01000	acyl-CoA thioester hydrolase, YbgC YbaW family
PAMIAFPB_01776	2.59e-121	rimN	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Belongs to the SUA5 family
PAMIAFPB_01777	0.0	clcB	-	-	P	ko:K03281	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01778	1.26e-225	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PAMIAFPB_01779	3.56e-152	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01780	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01781	1.05e-254	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHH family
PAMIAFPB_01782	3.42e-149	-	-	-	S	-	-	-	COG NOG30041 non supervised orthologous group
PAMIAFPB_01783	0.0	glmM	5.4.2.8	-	G	ko:K01840	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01784	0.0	-	-	-	KT	-	-	-	Y_Y_Y domain
PAMIAFPB_01785	0.0	-	-	-	P	-	-	-	TonB dependent receptor
PAMIAFPB_01786	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_01787	0.0	-	-	-	S	-	-	-	Peptidase of plants and bacteria
PAMIAFPB_01788	0.0	-	-	-	-	-	-	-	-
PAMIAFPB_01789	0.0	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	Alpha-L-fucosidase
PAMIAFPB_01790	0.0	-	-	-	KT	-	-	-	Transcriptional regulator, AraC family
PAMIAFPB_01791	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_01792	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_01793	0.0	-	-	-	M	-	-	-	Calpain family cysteine protease
PAMIAFPB_01794	4.4e-310	-	-	-	-	-	-	-	-
PAMIAFPB_01795	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
PAMIAFPB_01796	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
PAMIAFPB_01797	5.29e-196	-	-	-	S	-	-	-	Peptidase of plants and bacteria
PAMIAFPB_01798	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
PAMIAFPB_01799	4e-181	-	-	-	K	ko:K02477	-	ko00000,ko02022	LytTr DNA-binding domain protein
PAMIAFPB_01800	4.14e-235	-	-	-	T	-	-	-	Histidine kinase
PAMIAFPB_01801	5.7e-209	-	-	-	M	ko:K15727	-	ko00000,ko02000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMIAFPB_01802	0.0	czcA	-	-	P	ko:K15726	-	ko00000,ko02000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMIAFPB_01803	5.7e-89	-	-	-	-	-	-	-	-
PAMIAFPB_01804	1.97e-129	bsaA	1.11.1.9	-	O	ko:K00432	ko00480,ko00590,ko04918,map00480,map00590,map04918	ko00000,ko00001,ko01000	Belongs to the glutathione peroxidase family
PAMIAFPB_01805	7.16e-132	idi	-	-	I	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01806	3.06e-303	queA	2.4.99.17	-	H	ko:K07568	-	ko00000,ko01000,ko03016	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PAMIAFPB_01809	8e-188	thiD	2.7.1.49, 2.7.4.7	-	K	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	transcriptional regulator (AraC family)
PAMIAFPB_01811	5.25e-259	aroB	4.2.3.4	-	E	ko:K01735	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PAMIAFPB_01812	1.79e-87	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_01813	0.0	-	-	-	H	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_01814	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PAMIAFPB_01815	2.14e-127	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
PAMIAFPB_01816	8.69e-182	-	-	-	S	-	-	-	Protein of unknown function (DUF3822)
PAMIAFPB_01817	3.84e-162	-	-	-	S	-	-	-	COG NOG19144 non supervised orthologous group
PAMIAFPB_01818	0.0	recD2_2	3.1.11.5	-	L	ko:K01144	-	ko00000,ko01000	COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member
PAMIAFPB_01819	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_01820	0.0	-	-	-	S	-	-	-	non supervised orthologous group
PAMIAFPB_01821	1.42e-245	-	-	-	S	-	-	-	Putative glycoside hydrolase Family 18, chitinase_18
PAMIAFPB_01822	1.77e-284	-	-	-	S	-	-	-	Domain of unknown function (DUF1735)
PAMIAFPB_01823	0.0	-	-	-	G	-	-	-	Psort location Extracellular, score 9.71
PAMIAFPB_01824	1.22e-307	-	-	-	S	-	-	-	Domain of unknown function (DUF4989)
PAMIAFPB_01825	1.55e-104	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01826	0.0	-	-	-	G	-	-	-	Alpha-1,2-mannosidase
PAMIAFPB_01827	0.0	-	-	-	G	-	-	-	Alpha-1,2-mannosidase
PAMIAFPB_01828	1.26e-220	-	-	-	PT	-	-	-	COG3712 Fe2 -dicitrate sensor, membrane component
PAMIAFPB_01829	2.47e-125	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
PAMIAFPB_01830	0.0	-	-	-	G	-	-	-	Alpha-1,2-mannosidase
PAMIAFPB_01831	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PAMIAFPB_01832	1.15e-235	-	-	-	M	-	-	-	Peptidase, M23
PAMIAFPB_01833	8.21e-74	ycgE	-	-	K	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01834	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PAMIAFPB_01835	9.64e-317	mltD	-	-	M	ko:K08307	-	ko00000,ko01000,ko01011	Transglycosylase SLT domain
PAMIAFPB_01836	3.57e-205	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_01837	5.04e-201	parB	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
PAMIAFPB_01838	9.59e-172	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	CobQ CobB MinD ParA nucleotide binding domain
PAMIAFPB_01839	2.95e-195	surE	3.1.3.5	-	S	ko:K03787	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
PAMIAFPB_01840	8.47e-264	lpxB	2.4.1.182	GT19	M	ko:K00748	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PAMIAFPB_01841	5.08e-191	-	-	-	S	-	-	-	COG NOG29298 non supervised orthologous group
PAMIAFPB_01842	9.07e-196	cdsA	2.7.7.41	-	M	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
PAMIAFPB_01843	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PAMIAFPB_01844	2.12e-81	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PAMIAFPB_01846	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_01847	0.0	-	-	-	H	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_01848	3.51e-96	-	-	-	S	-	-	-	Domain of unknown function (DUF1735)
PAMIAFPB_01849	5.94e-186	-	-	-	S	-	-	-	Domain of unknown function (DUF1735)
PAMIAFPB_01850	0.0	-	-	-	A	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01851	3.77e-267	mgtE	-	-	P	ko:K06213	-	ko00000,ko02000	Acts as a magnesium transporter
PAMIAFPB_01852	1.82e-149	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PAMIAFPB_01853	4.99e-28	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PAMIAFPB_01854	9.93e-235	-	-	-	S	ko:K07027	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01855	0.0	pepD_2	-	-	E	ko:K01270	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	Xaa-His dipeptidase
PAMIAFPB_01857	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01858	0.0	-	-	-	S	-	-	-	COG2373 Large extracellular alpha-helical protein
PAMIAFPB_01859	5.99e-266	-	-	-	S	-	-	-	COG NOG19146 non supervised orthologous group
PAMIAFPB_01860	6.15e-259	argK	-	-	E	ko:K07588	-	ko00000,ko01000	Lao Ao transport system ATPase
PAMIAFPB_01861	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
PAMIAFPB_01862	1.2e-208	-	-	-	EG	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01863	8.37e-205	-	-	-	P	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01864	6.14e-238	-	-	-	P	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01865	5.4e-309	ybdG_2	-	-	M	ko:K16053	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score
PAMIAFPB_01866	6.5e-214	-	-	-	K	-	-	-	Transcriptional regulator, AraC family
PAMIAFPB_01867	0.0	-	-	-	M	-	-	-	TonB-dependent receptor
PAMIAFPB_01868	4.75e-269	-	-	-	N	-	-	-	COG NOG06100 non supervised orthologous group
PAMIAFPB_01869	0.0	-	-	-	T	-	-	-	PAS domain S-box protein
PAMIAFPB_01870	0.0	nuoN	1.6.5.3	-	C	ko:K00343	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PAMIAFPB_01871	0.0	nuoM	1.6.5.3	-	C	ko:K00342	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	proton-translocating NADH-quinone oxidoreductase, chain M
PAMIAFPB_01872	0.0	nuoL	1.6.5.3	-	CP	ko:K00341	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter MnhA subunit
PAMIAFPB_01873	3.53e-63	nuoK	1.6.5.3	-	C	ko:K00340	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PAMIAFPB_01874	9.81e-107	nuoJ	1.6.5.3	-	C	ko:K00339	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	COG0839 NADH ubiquinone oxidoreductase subunit 6 (chain J)
PAMIAFPB_01875	3.52e-99	nuoI	1.6.5.3	-	C	ko:K00338	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PAMIAFPB_01876	6.94e-262	nuoH	1.6.5.3	-	C	ko:K00337	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
PAMIAFPB_01877	0.0	nuoC	1.6.5.3	-	C	ko:K00333,ko:K13378	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PAMIAFPB_01878	1.66e-143	nuoB	1.6.5.3	-	C	ko:K00331	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PAMIAFPB_01879	2.61e-76	nuoA	1.6.5.3	-	C	ko:K00330	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PAMIAFPB_01880	1.84e-87	-	-	-	-	-	-	-	-
PAMIAFPB_01881	0.0	-	-	-	S	-	-	-	Psort location
PAMIAFPB_01882	9.82e-118	-	-	-	K	ko:K03088	-	ko00000,ko03021	Bacterial regulatory proteins, luxR family
PAMIAFPB_01883	2.63e-44	-	-	-	-	-	-	-	-
PAMIAFPB_01884	0.0	-	3.2.1.24	GH38	G	ko:K01191	ko00511,map00511	ko00000,ko00001,ko01000,ko04131	Alpha mannosidase middle domain
PAMIAFPB_01885	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
PAMIAFPB_01886	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 2 family
PAMIAFPB_01887	0.0	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
PAMIAFPB_01888	0.0	-	3.2.1.40	-	G	ko:K05989	-	ko00000,ko01000	Bacterial alpha-L-rhamnosidase C-terminal domain
PAMIAFPB_01889	3.06e-175	xynZ	-	-	S	-	-	-	Esterase
PAMIAFPB_01890	2.23e-171	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
PAMIAFPB_01891	1e-26	-	-	-	-	-	-	-	-
PAMIAFPB_01892	0.0	-	-	-	-	-	-	-	-
PAMIAFPB_01893	0.0	-	-	-	S	-	-	-	NHL repeat
PAMIAFPB_01894	0.0	-	-	-	P	-	-	-	TonB dependent receptor
PAMIAFPB_01895	0.0	-	-	-	P	-	-	-	SusD family
PAMIAFPB_01896	3.8e-251	-	-	-	S	-	-	-	Pfam:DUF5002
PAMIAFPB_01897	4.02e-148	-	-	-	S	-	-	-	Domain of unknown function (DUF5005)
PAMIAFPB_01898	6.5e-174	-	-	-	S	-	-	-	Domain of unknown function (DUF5005)
PAMIAFPB_01899	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_01900	3.6e-106	-	-	-	S	-	-	-	Domain of unknown function (DUF5004)
PAMIAFPB_01901	6.89e-258	-	-	-	S	-	-	-	Domain of unknown function (DUF4961)
PAMIAFPB_01902	0.0	-	-	-	P	-	-	-	TonB-dependent Receptor Plug Domain
PAMIAFPB_01903	7.55e-239	-	-	-	F	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_01904	1.57e-166	-	-	-	F	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_01905	0.0	-	-	-	H	-	-	-	CarboxypepD_reg-like domain
PAMIAFPB_01906	0.0	-	3.1.1.53	-	G	ko:K05970	-	ko00000,ko01000	Glycosyl hydrolase family 2, sugar binding domain protein
PAMIAFPB_01907	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
PAMIAFPB_01908	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
PAMIAFPB_01909	8.16e-291	-	3.2.1.197	-	G	ko:K21065	-	ko00000,ko01000	beta-1,4-mannooligosaccharide phosphorylase
PAMIAFPB_01910	0.0	-	-	-	G	-	-	-	Glycosyl hydrolases family 43
PAMIAFPB_01911	0.0	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
PAMIAFPB_01912	0.0	trkH	-	-	P	ko:K03498	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01913	0.0	trkA	-	-	C	ko:K03499	-	ko00000,ko02000	COG0569 K transport systems NAD-binding component
PAMIAFPB_01914	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PAMIAFPB_01915	7.02e-245	-	-	-	E	-	-	-	GSCFA family
PAMIAFPB_01916	0.0	alr	5.1.1.1	-	M	ko:K01775	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PAMIAFPB_01917	2.62e-27	tatA	-	-	U	ko:K03116	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
PAMIAFPB_01918	2.69e-189	tatC	-	-	U	ko:K03118	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PAMIAFPB_01919	0.0	-	3.6.4.12	-	L	ko:K10742	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	COG COG1112 Superfamily I DNA and RNA helicases and helicase subunits
PAMIAFPB_01920	0.0	exuT	-	-	G	ko:K08191	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01922	1.05e-223	kduI	5.3.1.17	-	G	ko:K01815	ko00040,map00040	ko00000,ko00001,ko01000	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
PAMIAFPB_01923	0.0	-	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01924	6.41e-306	-	3.2.1.172	GH105	G	ko:K15532	-	ko00000,ko01000	unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
PAMIAFPB_01925	8.94e-224	-	3.1.1.11	-	M	ko:K01051	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Pectinesterase
PAMIAFPB_01926	0.0	rhgT_2	3.1.1.11	-	EG	ko:K01051	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Psort location Extracellular, score
PAMIAFPB_01927	0.0	-	-	-	T	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_01929	1.61e-293	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PAMIAFPB_01930	1.8e-299	-	-	-	S	-	-	-	Domain of unknown function (DUF5123)
PAMIAFPB_01931	0.0	-	-	-	GM	ko:K21572	-	ko00000,ko02000	COG NOG31573 non supervised orthologous group
PAMIAFPB_01932	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_01933	0.0	-	-	-	G	-	-	-	pectate lyase K01728
PAMIAFPB_01934	0.0	-	-	-	G	-	-	-	pectate lyase K01728
PAMIAFPB_01935	2.91e-184	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_01936	6.29e-182	-	-	-	KT	-	-	-	COG COG3279 Response regulator of the LytR AlgR family
PAMIAFPB_01937	0.0	-	-	-	G	-	-	-	pectinesterase activity
PAMIAFPB_01938	0.0	-	-	-	S	-	-	-	Fibronectin type 3 domain
PAMIAFPB_01939	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_01940	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_01941	8.41e-56	-	-	-	G	-	-	-	Pectate lyase superfamily protein
PAMIAFPB_01942	2.9e-291	-	-	-	G	-	-	-	Pectate lyase superfamily protein
PAMIAFPB_01943	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_01944	1.08e-255	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_01945	1.31e-242	-	-	-	S	ko:K07139	-	ko00000	radical SAM protein, TIGR01212 family
PAMIAFPB_01946	1.06e-299	fprA	1.6.3.4	-	C	ko:K22405	-	ko00000,ko01000	anaerobic nitric oxide reductase flavorubredoxin
PAMIAFPB_01947	3.58e-197	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PAMIAFPB_01948	3.2e-149	yciO	-	-	J	-	-	-	Belongs to the SUA5 family
PAMIAFPB_01949	0.0	-	-	-	M	ko:K07289	-	ko00000	protein involved in outer membrane biogenesis
PAMIAFPB_01950	0.0	-	-	-	L	-	-	-	COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member
PAMIAFPB_01951	3.56e-188	-	-	-	S	-	-	-	of the HAD superfamily
PAMIAFPB_01952	6.53e-294	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
PAMIAFPB_01953	9.42e-258	-	-	-	S	ko:K07098	-	ko00000	Calcineurin-like phosphoesterase superfamily domain
PAMIAFPB_01955	4.17e-49	-	-	-	-	-	-	-	-
PAMIAFPB_01956	1.5e-170	-	-	-	-	-	-	-	-
PAMIAFPB_01957	5.52e-207	-	-	-	S	-	-	-	COG NOG34575 non supervised orthologous group
PAMIAFPB_01958	2.31e-257	-	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PAMIAFPB_01959	0.0	dapE	-	-	E	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01960	2.83e-261	aroC	4.2.3.5	-	E	ko:K01736	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PAMIAFPB_01961	7.73e-110	-	-	-	S	-	-	-	Calycin-like beta-barrel domain
PAMIAFPB_01962	1.64e-193	-	-	-	S	-	-	-	COG NOG19137 non supervised orthologous group
PAMIAFPB_01963	2.34e-266	-	-	-	S	-	-	-	non supervised orthologous group
PAMIAFPB_01964	4.18e-299	-	-	-	S	-	-	-	Belongs to the UPF0597 family
PAMIAFPB_01965	4.57e-129	slyD	5.2.1.8	-	G	ko:K03775	-	ko00000,ko01000,ko03110	Psort location Cytoplasmic, score
PAMIAFPB_01966	0.0	ilvD	4.2.1.9	-	H	ko:K01687	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the IlvD Edd family
PAMIAFPB_01967	0.0	ilvB	2.2.1.6	-	H	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Acetolactate synthase, large subunit
PAMIAFPB_01968	1.87e-126	ilvN	2.2.1.6	-	E	ko:K01653	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	COG0440 Acetolactate synthase, small (regulatory) subunit
PAMIAFPB_01969	3.56e-181	-	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
PAMIAFPB_01970	4.55e-253	ilvC	1.1.1.86	-	E	ko:K00053	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	ketol-acid reductoisomerase
PAMIAFPB_01971	0.0	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01972	0.0	acnA	4.2.1.3	-	C	ko:K01681	ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_01973	1.54e-291	icd	1.1.1.42	-	C	ko:K00031	ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146	br01601,ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_01974	0.0	prpC	2.3.3.1, 2.3.3.5	-	C	ko:K01647,ko:K01659	ko00020,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00640,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_01975	3.56e-184	-	1.3.1.22	-	S	ko:K12343	ko00140,map00140	ko00000,ko00001,ko01000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_01976	1.14e-294	-	-	-	C	-	-	-	Oxidoreductase, FAD FMN-binding protein
PAMIAFPB_01977	5.82e-189	-	-	-	IQ	-	-	-	Oxidoreductase, short chain dehydrogenase reductase family protein
PAMIAFPB_01979	2.92e-231	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PAMIAFPB_01980	2.85e-208	ispH	1.17.7.4	-	IM	ko:K03527	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PAMIAFPB_01981	1.89e-158	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
PAMIAFPB_01982	3.14e-156	-	-	-	U	ko:K03832	-	ko00000,ko02000	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PAMIAFPB_01983	9.06e-17	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PAMIAFPB_01984	2.84e-193	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PAMIAFPB_01985	2.12e-164	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01986	7.76e-186	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
PAMIAFPB_01988	3.94e-163	exbB	-	-	U	ko:K03561	-	ko00000,ko02000	MotA TolQ ExbB proton channel family
PAMIAFPB_01989	2.77e-104	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_01990	6.99e-136	-	-	-	U	-	-	-	COG NOG14449 non supervised orthologous group
PAMIAFPB_01991	4.13e-99	-	-	-	U	ko:K03559	-	ko00000,ko02000	COG NOG14448 non supervised orthologous group
PAMIAFPB_01992	2.61e-133	-	-	-	K	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_01993	0.0	-	-	-	S	-	-	-	IgA Peptidase M64
PAMIAFPB_01994	1.62e-111	asnC	-	-	K	ko:K03718	-	ko00000,ko03000	transcriptional regulator, AsnC family
PAMIAFPB_01995	6.28e-116	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PAMIAFPB_01996	8.15e-200	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PAMIAFPB_01997	6.01e-300	cls	-	-	M	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the phospholipase D family. Cardiolipin synthase subfamily
PAMIAFPB_01999	2.5e-64	-	-	-	S	-	-	-	Domain of unknown function (DUF5056)
PAMIAFPB_02000	3.67e-126	rpoE	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PAMIAFPB_02001	7.25e-162	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_02002	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family
PAMIAFPB_02003	2.16e-200	-	-	-	-	-	-	-	-
PAMIAFPB_02004	7.4e-270	-	-	-	MU	-	-	-	outer membrane efflux protein
PAMIAFPB_02005	0.0	czcA	-	-	P	-	-	-	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMIAFPB_02006	4.84e-279	-	-	-	M	-	-	-	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMIAFPB_02007	2.03e-69	-	-	-	S	-	-	-	COG NOG32090 non supervised orthologous group
PAMIAFPB_02008	0.0	-	-	-	S	ko:K06158	-	ko00000,ko03012	Psort location CytoplasmicMembrane, score
PAMIAFPB_02009	5.59e-90	divK	-	-	T	-	-	-	Response regulator receiver domain protein
PAMIAFPB_02010	0.0	-	-	-	H	-	-	-	COG NOG26372 non supervised orthologous group
PAMIAFPB_02011	0.0	-	-	-	NPU	-	-	-	Psort location OuterMembrane, score 9.49
PAMIAFPB_02012	2.23e-37	-	-	-	P	-	-	-	Carboxypeptidase regulatory-like domain
PAMIAFPB_02013	1.58e-192	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02014	3.54e-129	-	-	-	L	-	-	-	DnaD domain protein
PAMIAFPB_02015	1.27e-108	-	-	-	V	-	-	-	N-acetylmuramoyl-L-alanine amidase
PAMIAFPB_02016	2.04e-174	-	-	-	L	-	-	-	HNH endonuclease domain protein
PAMIAFPB_02017	1.1e-19	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02018	1.44e-57	-	-	-	S	-	-	-	WYL_2, Sm-like SH3 beta-barrel fold
PAMIAFPB_02019	9.36e-130	-	-	-	-	-	-	-	-
PAMIAFPB_02020	0.0	-	-	-	T	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_02021	9.51e-35	-	-	-	S	-	-	-	Domain of unknown function (DUF4248)
PAMIAFPB_02022	8.11e-97	-	-	-	L	-	-	-	DNA-binding protein
PAMIAFPB_02024	0.0	-	-	-	U	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02025	0.0	ppk	2.7.4.1	-	H	ko:K00937	ko00190,ko03018,map00190,map03018	ko00000,ko00001,ko01000,ko03019	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PAMIAFPB_02026	1.48e-118	-	-	-	S	ko:K07095	-	ko00000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02027	9.94e-210	rfbA	2.7.7.24	-	H	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PAMIAFPB_02028	1.4e-287	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PAMIAFPB_02029	1.19e-202	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the MenA family. Type 1 subfamily
PAMIAFPB_02030	3.8e-251	-	-	-	S	ko:K07098	-	ko00000	Ser Thr phosphatase family protein
PAMIAFPB_02032	3.12e-109	-	-	-	S	ko:K07133	-	ko00000	ATPase (AAA superfamily)
PAMIAFPB_02033	3.51e-174	-	-	-	S	ko:K07133	-	ko00000	ATPase (AAA superfamily)
PAMIAFPB_02034	1.42e-151	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PAMIAFPB_02035	5.19e-50	-	-	-	-	-	-	-	-
PAMIAFPB_02036	2.84e-143	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
PAMIAFPB_02037	1.59e-185	-	-	-	S	-	-	-	stress-induced protein
PAMIAFPB_02038	6.13e-165	yeaZ	-	-	O	ko:K14742	-	ko00000,ko03016	Universal bacterial protein YeaZ
PAMIAFPB_02039	1.12e-149	-	-	-	S	-	-	-	COG NOG11645 non supervised orthologous group
PAMIAFPB_02040	4.62e-310	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PAMIAFPB_02041	2.8e-124	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PAMIAFPB_02042	4.34e-201	nlpD_1	-	-	M	-	-	-	Peptidase, M23 family
PAMIAFPB_02043	8.35e-277	dxr	1.1.1.267	-	I	ko:K00099	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
PAMIAFPB_02044	0.0	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
PAMIAFPB_02045	0.0	-	-	-	EGP	ko:K08169	-	ko00000,ko02000	the major facilitator superfamily
PAMIAFPB_02046	1.6e-118	nrdG	1.97.1.4	-	C	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PAMIAFPB_02047	0.0	nrdD	1.1.98.6	-	FK	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02048	6.54e-77	-	-	-	-	-	-	-	-
PAMIAFPB_02049	4.62e-293	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PAMIAFPB_02051	9.25e-71	-	-	-	-	-	-	-	-
PAMIAFPB_02052	0.0	-	-	-	M	-	-	-	COG COG3209 Rhs family protein
PAMIAFPB_02053	8.14e-228	-	-	-	M	-	-	-	COG COG3209 Rhs family protein
PAMIAFPB_02054	0.0	-	-	-	M	-	-	-	COG3209 Rhs family protein
PAMIAFPB_02055	3.04e-09	-	-	-	-	-	-	-	-
PAMIAFPB_02056	1.27e-104	-	3.5.1.28	-	V	ko:K01447	-	ko00000,ko01000	N-acetylmuramoyl-L-alanine amidase
PAMIAFPB_02057	3.62e-100	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02058	1.38e-253	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02059	8e-49	-	-	-	S	-	-	-	Domain of unknown function (DUF4248)
PAMIAFPB_02060	0.0	-	-	-	L	-	-	-	Protein of unknown function (DUF3987)
PAMIAFPB_02061	7.45e-167	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	COG COG0120 Ribose 5-phosphate isomerase
PAMIAFPB_02062	2.24e-101	-	-	-	-	-	-	-	-
PAMIAFPB_02063	1.02e-42	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix domain
PAMIAFPB_02064	2.07e-171	hly-III	-	-	S	ko:K11068	-	ko00000,ko02042	membrane protein, hemolysin III homolog
PAMIAFPB_02065	1.02e-72	-	-	-	-	-	-	-	-
PAMIAFPB_02066	1.29e-13	-	-	-	E	-	-	-	Domain of Unknown Function with PDB structure (DUF3857)
PAMIAFPB_02067	1.48e-215	ddh	1.4.1.16	-	E	ko:K03340	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
PAMIAFPB_02068	1.19e-129	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PAMIAFPB_02069	6.53e-250	-	-	-	S	-	-	-	COG NOG26961 non supervised orthologous group
PAMIAFPB_02070	3.8e-15	-	-	-	-	-	-	-	-
PAMIAFPB_02071	3.54e-193	-	-	-	-	-	-	-	-
PAMIAFPB_02072	0.0	cca	2.7.7.19, 2.7.7.72	-	J	ko:K00970,ko:K00974	ko03013,ko03018,map03013,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	tRNA nucleotidyltransferase poly(A) polymerase
PAMIAFPB_02073	2.62e-283	pepQ	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	xaa-pro dipeptidase K01271
PAMIAFPB_02074	0.0	gdh	1.4.1.4	-	C	ko:K00262	ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
PAMIAFPB_02075	0.0	ppsA	-	-	GKT	-	-	-	Pyruvate phosphate dikinase, PEP pyruvate binding domain
PAMIAFPB_02076	0.0	katA	1.11.1.6	-	P	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	ko00000,ko00001,ko00002,ko01000	Belongs to the catalase family
PAMIAFPB_02077	0.0	gdhA	1.4.1.4	-	C	ko:K00262	ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
PAMIAFPB_02078	4.83e-30	-	-	-	-	-	-	-	-
PAMIAFPB_02079	0.0	maeB	1.1.1.38, 1.1.1.40	-	C	ko:K00027,ko:K00029	ko00620,ko00710,ko01100,ko01120,ko01200,ko02020,map00620,map00710,map01100,map01120,map01200,map02020	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_02080	0.0	-	-	-	EGP	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02081	4.8e-230	emrA_1	-	-	V	ko:K03543	-	ko00000,ko00002,ko02000	Auxiliary transport protein, membrane fusion protein (MFP) family protein
PAMIAFPB_02082	1.35e-300	-	-	-	MU	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_02083	7.17e-262	bcr	-	-	EGP	ko:K03446,ko:K07552	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score
PAMIAFPB_02084	5.53e-207	thiD	2.7.1.49, 2.7.4.7	-	K	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	transcriptional regulator (AraC family)
PAMIAFPB_02085	1.65e-251	-	-	-	M	ko:K03585	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMIAFPB_02086	0.0	-	-	-	V	ko:K03296	-	ko00000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMIAFPB_02087	1.43e-308	-	-	-	MU	-	-	-	Efflux transporter, outer membrane factor lipoprotein, NodT family
PAMIAFPB_02088	8.15e-133	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAMIAFPB_02089	1.55e-168	-	-	-	K	-	-	-	transcriptional regulator
PAMIAFPB_02090	1.29e-145	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_02091	2.15e-45	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_02092	0.0	-	-	-	-	-	-	-	-
PAMIAFPB_02094	2.17e-313	-	-	-	L	-	-	-	COG COG3666 Transposase and inactivated derivatives
PAMIAFPB_02095	7.78e-194	-	-	-	M	-	-	-	Putative OmpA-OmpF-like porin family
PAMIAFPB_02096	8.98e-90	-	-	-	S	-	-	-	Domain of unknown function (DUF4369)
PAMIAFPB_02097	4.85e-183	-	-	-	S	-	-	-	Beta-lactamase superfamily domain
PAMIAFPB_02098	0.0	metZ	2.5.1.49	-	E	ko:K01740,ko:K10764	ko00270,ko00920,ko01100,map00270,map00920,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_02099	8.43e-209	-	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	N-acetylmuramoyl-L-alanine amidase
PAMIAFPB_02100	6.82e-230	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02101	0.0	-	-	-	P	-	-	-	Type I phosphodiesterase / nucleotide pyrophosphatase
PAMIAFPB_02102	0.0	-	2.1.3.15, 6.4.1.3	-	I	ko:K01966	ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Carboxyl transferase domain
PAMIAFPB_02103	1.85e-90	-	6.4.1.1	-	I	ko:K01960	ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Biotin-requiring enzyme
PAMIAFPB_02104	0.0	accC	6.3.4.14, 6.4.1.2, 6.4.1.3	-	I	ko:K01961,ko:K01965	ko00061,ko00280,ko00620,ko00630,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Biotin carboxylase
PAMIAFPB_02105	1.25e-72	-	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
PAMIAFPB_02106	9.95e-289	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PAMIAFPB_02107	2.81e-37	-	-	-	-	-	-	-	-
PAMIAFPB_02108	3.14e-181	-	1.1.1.159, 1.3.1.25	-	IQ	ko:K00076,ko:K05783	ko00121,ko00362,ko00364,ko00622,ko01100,ko01120,ko01220,map00121,map00362,map00364,map00622,map01100,map01120,map01220	br01602,ko00000,ko00001,ko00002,ko01000	Oxidoreductase, short chain dehydrogenase reductase family protein
PAMIAFPB_02109	5.27e-236	-	-	-	L	-	-	-	Domain of unknown function (DUF1848)
PAMIAFPB_02111	5.21e-195	-	-	-	S	-	-	-	COG NOG27239 non supervised orthologous group
PAMIAFPB_02112	8.47e-158	-	-	-	K	-	-	-	Helix-turn-helix domain
PAMIAFPB_02113	3.78e-85	-	-	-	S	ko:K06996	-	ko00000	Glyoxalase-like domain
PAMIAFPB_02114	3.09e-210	-	-	-	K	ko:K13652	-	ko00000,ko03000	methylphosphotriester-DNA alkyltransferase (AraC XylS family)
PAMIAFPB_02115	4.78e-46	-	-	-	S	-	-	-	Winged helix-turn-helix domain (DUF2582)
PAMIAFPB_02116	6.29e-180	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PAMIAFPB_02117	3.53e-315	-	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Aspartate kinase
PAMIAFPB_02118	1.23e-308	-	-	-	V	-	-	-	COG0534 Na -driven multidrug efflux pump
PAMIAFPB_02119	6.75e-166	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02120	3.37e-222	-	-	-	S	-	-	-	Protein of unknown function (DUF3137)
PAMIAFPB_02121	5.34e-162	-	-	-	S	ko:K03744	-	ko00000	LemA family
PAMIAFPB_02122	5.64e-286	-	-	-	MO	-	-	-	Bacterial group 3 Ig-like protein
PAMIAFPB_02123	2.25e-100	-	-	-	-	-	-	-	-
PAMIAFPB_02124	0.0	-	-	-	S	-	-	-	response regulator aspartate phosphatase
PAMIAFPB_02125	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	COG COG3973 Superfamily I DNA and RNA helicases
PAMIAFPB_02126	7.33e-141	-	-	-	S	-	-	-	COG NOG23385 non supervised orthologous group
PAMIAFPB_02127	7.14e-182	-	-	-	K	-	-	-	COG NOG38984 non supervised orthologous group
PAMIAFPB_02128	2.23e-65	-	-	-	S	-	-	-	COG COG0724 RNA-binding proteins (RRM domain)
PAMIAFPB_02129	2.28e-257	-	-	-	S	-	-	-	Nitronate monooxygenase
PAMIAFPB_02130	4.48e-257	rhlE	3.6.4.13	-	JKL	ko:K11927	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Belongs to the DEAD box helicase family
PAMIAFPB_02131	1.44e-88	cspG	-	-	K	-	-	-	Cold-shock DNA-binding domain protein
PAMIAFPB_02133	1.12e-315	-	-	-	G	-	-	-	Glycosyl hydrolase
PAMIAFPB_02135	6.3e-251	thiL	2.7.4.16	-	H	ko:K00946	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
PAMIAFPB_02136	1.24e-192	deoD	2.4.2.1	-	F	ko:K03783	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
PAMIAFPB_02137	4.33e-283	lpxK	2.7.1.130	-	F	ko:K00912	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA)
PAMIAFPB_02138	0.0	sppA	-	-	OU	ko:K04773	-	ko00000,ko01000,ko01002	signal peptide peptidase SppA, 67K type
PAMIAFPB_02139	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
PAMIAFPB_02140	1.31e-135	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
PAMIAFPB_02141	2.84e-239	-	-	-	PT	-	-	-	Sigma factor regulatory protein, FecR PupR family
PAMIAFPB_02142	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_02143	0.0	-	-	-	M	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_02144	1.41e-243	-	-	-	G	-	-	-	Glycosyl hydrolases family 43
PAMIAFPB_02145	0.0	bglX	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	glycosyl hydrolase, family 3
PAMIAFPB_02146	0.0	-	3.2.1.20	GH31	M	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	COG NOG06228 non supervised orthologous group
PAMIAFPB_02150	3.47e-26	-	-	-	-	-	-	-	-
PAMIAFPB_02151	0.0	leuA	2.3.3.13	-	E	ko:K01649	ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PAMIAFPB_02152	0.0	leuC	4.2.1.33, 4.2.1.35	-	H	ko:K01703	ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PAMIAFPB_02153	4.22e-143	leuD	4.2.1.33, 4.2.1.35	-	E	ko:K01704	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PAMIAFPB_02154	0.0	leuA_1	2.3.1.182	-	E	ko:K09011	ko00290,ko00660,ko01100,ko01210,ko01230,map00290,map00660,map01100,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Belongs to the alpha-IPM synthase homocitrate synthase family
PAMIAFPB_02155	1.83e-259	leuB	1.1.1.85	-	CE	ko:K00052	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PAMIAFPB_02156	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4784)
PAMIAFPB_02157	1.36e-157	-	-	-	Q	-	-	-	ubiE/COQ5 methyltransferase family
PAMIAFPB_02158	9.09e-164	ybjG	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02159	0.0	ltaS2	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_02160	5.35e-220	cysK	2.5.1.47	-	E	ko:K01738,ko:K12339	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
PAMIAFPB_02161	3.32e-60	-	-	-	S	-	-	-	COG COG0457 FOG TPR repeat
PAMIAFPB_02162	9.09e-260	-	-	-	M	-	-	-	Acyltransferase family
PAMIAFPB_02163	0.0	recQ3	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
PAMIAFPB_02164	3.16e-102	-	-	-	K	-	-	-	transcriptional regulator (AraC
PAMIAFPB_02165	0.0	-	3.4.14.4	-	S	ko:K01277	-	ko00000,ko01000,ko01002	Peptidase family M49
PAMIAFPB_02166	1.19e-157	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02167	7.33e-112	fur	-	-	P	ko:K03711	-	ko00000,ko03000	Belongs to the Fur family
PAMIAFPB_02168	5.9e-316	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PAMIAFPB_02169	0.0	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	Alpha-L-fucosidase
PAMIAFPB_02170	5.87e-156	-	-	-	S	ko:K06973	-	ko00000	neutral zinc metallopeptidase
PAMIAFPB_02171	0.0	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Psort location Cytoplasmic, score
PAMIAFPB_02172	0.0	-	-	-	S	-	-	-	phospholipase Carboxylesterase
PAMIAFPB_02173	0.0	-	-	-	EU	-	-	-	Peptidase, S9A B C family, catalytic domain protein
PAMIAFPB_02174	2.67e-292	hydF	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02175	0.0	hydG	4.1.99.19	-	C	ko:K03150	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Iron-only hydrogenase maturation rSAM protein HydG
PAMIAFPB_02176	7.11e-253	hydE	2.8.1.6	-	C	ko:K01012	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	Iron-only hydrogenase maturation rSAM protein HydE
PAMIAFPB_02177	0.0	-	-	-	C	-	-	-	4Fe-4S binding domain protein
PAMIAFPB_02178	3.89e-22	-	-	-	-	-	-	-	-
PAMIAFPB_02179	0.0	-	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02180	2.2e-147	-	-	-	S	-	-	-	L,D-transpeptidase catalytic domain
PAMIAFPB_02181	4.84e-257	-	-	-	S	-	-	-	COG NOG25022 non supervised orthologous group
PAMIAFPB_02182	3.78e-57	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PAMIAFPB_02183	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PAMIAFPB_02184	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02185	2.89e-224	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_02186	0.0	-	-	-	D	-	-	-	COG NOG14601 non supervised orthologous group
PAMIAFPB_02187	2.96e-116	-	-	-	S	-	-	-	GDYXXLXY protein
PAMIAFPB_02188	1.39e-209	-	-	-	S	-	-	-	Domain of unknown function (DUF4401)
PAMIAFPB_02189	8.3e-214	-	-	-	S	-	-	-	Predicted membrane protein (DUF2157)
PAMIAFPB_02190	6.41e-153	poxB	1.2.5.1, 2.2.1.6	-	C	ko:K00156,ko:K01652	ko00290,ko00620,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
PAMIAFPB_02191	1.01e-254	poxB	1.2.5.1, 2.2.1.6	-	C	ko:K00156,ko:K01652	ko00290,ko00620,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
PAMIAFPB_02192	2.13e-48	-	-	-	S	-	-	-	COG NOG33517 non supervised orthologous group
PAMIAFPB_02193	1.06e-90	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
PAMIAFPB_02194	3.95e-121	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PAMIAFPB_02195	1.71e-78	-	-	-	-	-	-	-	-
PAMIAFPB_02196	1e-248	ltaE	4.1.2.48	-	E	ko:K01620	ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02197	3.53e-298	-	-	-	M	-	-	-	COG NOG06295 non supervised orthologous group
PAMIAFPB_02198	0.0	eptA	-	-	S	-	-	-	lipid A phosphoethanolamine transferase, associated with polymyxin resistance
PAMIAFPB_02199	3.96e-183	dnaJ2	-	-	O	ko:K03686,ko:K05516	-	ko00000,ko03029,ko03036,ko03110	Psort location Cytoplasmic, score
PAMIAFPB_02200	3.55e-69	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02201	5.89e-108	msrC	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02202	0.0	-	-	-	C	-	-	-	Domain of unknown function (DUF4132)
PAMIAFPB_02203	2.93e-93	-	-	-	-	-	-	-	-
PAMIAFPB_02204	0.0	-	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Psort location CytoplasmicMembrane, score
PAMIAFPB_02205	0.0	acd	-	-	C	-	-	-	Acyl-CoA dehydrogenase, C-terminal domain
PAMIAFPB_02206	1.08e-244	etfA	-	-	C	ko:K03522	-	ko00000,ko04147	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02207	4.9e-205	etfB	-	-	C	ko:K03521	-	ko00000	COG2086 Electron transfer flavoprotein beta subunit
PAMIAFPB_02208	1.15e-162	-	-	-	S	-	-	-	Psort location OuterMembrane, score 9.52
PAMIAFPB_02209	0.0	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
PAMIAFPB_02210	0.0	-	-	-	T	-	-	-	COG0642 Signal transduction histidine kinase
PAMIAFPB_02211	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_02212	0.0	-	-	-	M	ko:K02014	-	ko00000,ko02000	Psort location OuterMembrane, score 10.00
PAMIAFPB_02213	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4925)
PAMIAFPB_02214	1.87e-204	-	-	-	K	-	-	-	transcriptional regulator (AraC family)
PAMIAFPB_02215	5.65e-276	-	-	-	T	-	-	-	Sensor histidine kinase
PAMIAFPB_02216	1.05e-166	-	-	-	K	-	-	-	Response regulator receiver domain protein
PAMIAFPB_02217	4.79e-294	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
PAMIAFPB_02218	2.64e-61	-	-	-	S	-	-	-	Domain of unknown function (DUF4907)
PAMIAFPB_02219	1.31e-271	nanM	-	-	S	-	-	-	COG NOG23382 non supervised orthologous group
PAMIAFPB_02220	0.0	-	-	-	S	-	-	-	COG NOG26034 non supervised orthologous group
PAMIAFPB_02221	1.76e-279	-	-	-	I	-	-	-	COG NOG24984 non supervised orthologous group
PAMIAFPB_02222	6.67e-120	-	-	-	S	-	-	-	COG NOG28134 non supervised orthologous group
PAMIAFPB_02223	0.0	nhaS3	-	-	P	-	-	-	Sodium/hydrogen exchanger family
PAMIAFPB_02224	2.28e-53	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02225	2.36e-42	-	-	-	-	-	-	-	-
PAMIAFPB_02226	2.32e-90	-	-	-	-	-	-	-	-
PAMIAFPB_02227	1.7e-41	-	-	-	-	-	-	-	-
PAMIAFPB_02229	3.36e-38	-	-	-	-	-	-	-	-
PAMIAFPB_02230	0.0	-	-	-	L	-	-	-	Transposase and inactivated derivatives
PAMIAFPB_02231	5.75e-208	-	3.6.1.3	-	S	ko:K07132	-	ko00000,ko01000	AAA domain
PAMIAFPB_02232	1.08e-96	-	-	-	-	-	-	-	-
PAMIAFPB_02233	4.02e-167	-	-	-	O	-	-	-	ATP-dependent serine protease
PAMIAFPB_02234	3.9e-58	-	-	-	L	-	-	-	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
PAMIAFPB_02235	5.16e-217	-	-	-	-	-	-	-	-
PAMIAFPB_02236	4.85e-65	-	-	-	-	-	-	-	-
PAMIAFPB_02237	1.36e-122	-	-	-	-	-	-	-	-
PAMIAFPB_02238	3.8e-39	-	-	-	-	-	-	-	-
PAMIAFPB_02239	2.02e-26	-	-	-	-	-	-	-	-
PAMIAFPB_02240	2.02e-97	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02241	1.9e-147	-	-	-	S	-	-	-	Protein of unknown function (DUF3164)
PAMIAFPB_02243	1.88e-62	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02244	6.01e-104	-	-	-	-	-	-	-	-
PAMIAFPB_02245	1.57e-143	-	-	-	S	-	-	-	Phage virion morphogenesis
PAMIAFPB_02246	1.67e-57	-	-	-	-	-	-	-	-
PAMIAFPB_02247	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02248	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02249	2.59e-97	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02250	3.19e-250	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02251	3.75e-98	-	-	-	-	-	-	-	-
PAMIAFPB_02252	2.22e-257	-	-	-	OU	-	-	-	Psort location Cytoplasmic, score
PAMIAFPB_02253	3.21e-285	-	-	-	-	-	-	-	-
PAMIAFPB_02254	4.01e-114	-	-	-	V	-	-	-	N-acetylmuramoyl-L-alanine amidase
PAMIAFPB_02255	1.14e-87	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_02256	7.65e-101	-	-	-	-	-	-	-	-
PAMIAFPB_02257	2.73e-73	-	-	-	-	-	-	-	-
PAMIAFPB_02258	1.61e-131	-	-	-	-	-	-	-	-
PAMIAFPB_02259	7.63e-112	-	-	-	-	-	-	-	-
PAMIAFPB_02260	0.0	-	-	-	D	-	-	-	protein involved in control of spindle dynamics together with kar3p K00870
PAMIAFPB_02261	6.41e-111	-	-	-	-	-	-	-	-
PAMIAFPB_02262	0.0	-	-	-	S	-	-	-	Phage minor structural protein
PAMIAFPB_02263	0.0	-	-	-	-	-	-	-	-
PAMIAFPB_02264	5.41e-43	-	-	-	-	-	-	-	-
PAMIAFPB_02265	5.87e-313	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02266	2.57e-118	-	-	-	-	-	-	-	-
PAMIAFPB_02267	2.65e-48	-	-	-	-	-	-	-	-
PAMIAFPB_02268	4.52e-154	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_02269	7.86e-208	-	-	-	L	-	-	-	D12 class N6 adenine-specific DNA methyltransferase
PAMIAFPB_02270	2.74e-105	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02271	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 43 family
PAMIAFPB_02272	0.0	-	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Psort location Periplasmic, score 9.44
PAMIAFPB_02273	0.0	-	3.1.1.53	-	G	ko:K05970	-	ko00000,ko01000	Glycosyl hydrolase family 2, sugar binding domain protein
PAMIAFPB_02274	0.0	-	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Psort location Periplasmic, score
PAMIAFPB_02275	0.0	-	3.2.1.51	GH95	G	ko:K15923	ko00511,map00511	ko00000,ko00001,ko01000	Glycosyl hydrolase family 65, N-terminal domain
PAMIAFPB_02276	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 2 family
PAMIAFPB_02277	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF5010)
PAMIAFPB_02278	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_02279	0.0	-	-	-	S	-	-	-	Susd and RagB outer membrane lipoprotein
PAMIAFPB_02280	0.0	-	-	-	-	-	-	-	-
PAMIAFPB_02281	0.0	-	-	-	N	-	-	-	Leucine rich repeats (6 copies)
PAMIAFPB_02282	0.0	-	-	-	T	-	-	-	COG NOG26059 non supervised orthologous group
PAMIAFPB_02283	0.0	-	-	-	G	-	-	-	cog cog3537
PAMIAFPB_02284	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 2 family
PAMIAFPB_02285	9.99e-246	-	-	-	K	-	-	-	WYL domain
PAMIAFPB_02286	0.0	-	-	-	S	-	-	-	TROVE domain
PAMIAFPB_02287	0.0	sacC	3.2.1.80	-	G	ko:K03332	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 32 family
PAMIAFPB_02288	4.28e-224	lacX	-	-	G	-	-	-	COG COG2017 Galactose mutarotase and related enzymes
PAMIAFPB_02289	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_02290	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	Pfam:SusD
PAMIAFPB_02291	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4960)
PAMIAFPB_02292	0.0	-	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	hydrolase family 32
PAMIAFPB_02293	0.0	sacC	3.2.1.80	-	G	ko:K03332	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 32 family
PAMIAFPB_02294	4.1e-272	-	-	-	G	-	-	-	Transporter, major facilitator family protein
PAMIAFPB_02295	1.54e-215	ydjH_1	2.7.1.4	-	G	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	pfkB family
PAMIAFPB_02296	3.06e-198	-	-	-	S	-	-	-	protein conserved in bacteria
PAMIAFPB_02297	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_02298	3.96e-75	ogt	2.1.1.63	-	L	ko:K00567,ko:K07443	-	ko00000,ko01000,ko03400	6-O-methylguanine DNA methyltransferase, DNA binding domain
PAMIAFPB_02299	1.22e-282	-	-	-	S	-	-	-	Pfam:DUF2029
PAMIAFPB_02300	5.27e-280	proV	3.6.3.32	-	S	ko:K02000	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	IMP dehydrogenase activity
PAMIAFPB_02301	7.14e-191	opuAB	-	-	P	ko:K02001	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	glycine betaine transport system, permease
PAMIAFPB_02302	4.71e-201	opuAC	-	-	E	ko:K02002	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, substrate-binding protein, QAT family
PAMIAFPB_02303	1e-35	-	-	-	-	-	-	-	-
PAMIAFPB_02304	0.0	nifJ	1.2.7.1	-	C	ko:K03737	ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
PAMIAFPB_02305	2.57e-288	-	-	-	S	ko:K07133	-	ko00000	ATPase (AAA superfamily)
PAMIAFPB_02306	1.18e-281	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02307	0.0	yngK	-	-	S	-	-	-	lipoprotein YddW precursor K01189
PAMIAFPB_02308	4.12e-108	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
PAMIAFPB_02309	5.75e-254	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
PAMIAFPB_02310	0.0	cstA	-	-	T	ko:K06200	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02311	2.87e-30	-	-	-	S	-	-	-	COG NOG34202 non supervised orthologous group
PAMIAFPB_02312	6.82e-114	-	-	-	MU	-	-	-	COG NOG29365 non supervised orthologous group
PAMIAFPB_02313	0.0	uvrA1	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PAMIAFPB_02314	1.36e-91	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_02315	6.36e-309	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_02316	0.0	yngK	-	-	S	-	-	-	lipoprotein YddW precursor
PAMIAFPB_02317	1.68e-122	-	-	-	P	ko:K07240	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02318	1.13e-126	chrA	-	-	P	ko:K07240	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score
PAMIAFPB_02319	0.0	-	-	-	T	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_02320	0.0	purL	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate
PAMIAFPB_02321	2.05e-147	-	-	-	E	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02322	8.01e-125	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02323	6.01e-211	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PAMIAFPB_02324	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PAMIAFPB_02325	4.91e-131	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
PAMIAFPB_02326	2.43e-181	-	-	-	PT	-	-	-	FecR protein
PAMIAFPB_02327	1.56e-230	-	-	-	L	-	-	-	COG NOG21178 non supervised orthologous group
PAMIAFPB_02328	2.27e-134	-	-	-	K	-	-	-	COG NOG19120 non supervised orthologous group
PAMIAFPB_02329	0.0	kpsD	-	-	M	-	-	-	COG1596 Periplasmic protein involved in polysaccharide export
PAMIAFPB_02330	1.96e-255	-	-	-	M	-	-	-	Chain length determinant protein
PAMIAFPB_02331	4.86e-175	-	-	-	M	-	-	-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
PAMIAFPB_02332	3.84e-316	aepX	2.7.7.15, 2.7.7.39, 5.4.2.9	-	GIM	ko:K00968,ko:K00980,ko:K01841	ko00440,ko00564,ko01100,ko01120,ko01130,ko05231,map00440,map00564,map01100,map01120,map01130,map05231	ko00000,ko00001,ko00002,ko01000	Phosphoenolpyruvate phosphomutase
PAMIAFPB_02333	4.13e-278	aepY	4.1.1.82	-	C	ko:K09459	ko00440,ko01100,ko01120,ko01130,map00440,map01100,map01120,map01130	ko00000,ko00001,ko01000	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
PAMIAFPB_02334	1.62e-279	phnW	2.6.1.37	-	E	ko:K03430,ko:K09469	ko00440,ko01100,ko01120,map00440,map01100,map01120	ko00000,ko00001,ko01000,ko01007	Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily
PAMIAFPB_02336	2.61e-315	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02337	1.49e-312	-	-	-	M	-	-	-	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PAMIAFPB_02338	1.9e-177	-	2.7.7.92	-	M	ko:K07257,ko:K21750	-	ko00000,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02339	1.89e-253	neuB	2.5.1.132	-	M	ko:K21279	-	ko00000,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02340	5.16e-115	kdsC	2.7.7.43, 2.7.7.92, 3.1.3.103	-	M	ko:K21055,ko:K21749	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family
PAMIAFPB_02341	5.16e-188	-	-	-	M	-	-	-	Glycosyl transferases group 1
PAMIAFPB_02342	5.12e-81	-	-	-	M	-	-	-	Glycosyl transferases group 1
PAMIAFPB_02343	1.17e-249	-	-	-	-	-	-	-	-
PAMIAFPB_02345	2.51e-194	-	-	-	M	-	-	-	Glycosyltransferase, group 2 family protein
PAMIAFPB_02346	9.93e-155	-	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_02347	7.31e-65	-	-	-	S	ko:K07075	-	ko00000	Nucleotidyltransferase domain
PAMIAFPB_02348	8.44e-101	-	3.5.1.28	-	V	ko:K01447	-	ko00000,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02350	2.14e-99	-	-	-	L	-	-	-	regulation of translation
PAMIAFPB_02351	3.54e-47	-	-	-	S	-	-	-	Domain of unknown function (DUF4248)
PAMIAFPB_02352	0.0	-	-	-	L	-	-	-	COG NOG25561 non supervised orthologous group
PAMIAFPB_02353	8.8e-149	-	-	-	L	-	-	-	VirE N-terminal domain protein
PAMIAFPB_02355	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02356	1.36e-46	-	4.1.1.3	-	C	ko:K01573	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000,ko02000	Sodium pump decarboxylase gamma subunit
PAMIAFPB_02357	0.0	cfiA	6.4.1.1	-	C	ko:K01960	ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	COG5016 Pyruvate oxaloacetate carboxyltransferase
PAMIAFPB_02358	6.95e-282	-	4.1.1.3	-	C	ko:K01572	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000,ko02000	sodium ion-translocating decarboxylase, beta subunit
PAMIAFPB_02359	1.4e-300	-	-	-	MU	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_02360	0.0	-	-	-	V	-	-	-	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMIAFPB_02361	1.41e-241	-	-	-	M	-	-	-	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMIAFPB_02362	4.78e-55	rpmE2	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
PAMIAFPB_02363	6.71e-241	fba	4.1.2.13	-	G	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_02364	3.16e-313	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
PAMIAFPB_02365	7.32e-269	oadB	4.1.1.3	-	C	ko:K01572	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000,ko02000	sodium ion-translocating decarboxylase, beta subunit
PAMIAFPB_02366	1.3e-78	mmdC	-	-	I	-	-	-	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PAMIAFPB_02367	4.4e-216	-	-	-	C	-	-	-	Lamin Tail Domain
PAMIAFPB_02368	0.0	mmdA	-	-	I	-	-	-	COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
PAMIAFPB_02369	2.75e-91	mce	5.1.99.1	-	E	ko:K05606	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02370	6.24e-245	-	-	-	V	-	-	-	COG NOG22551 non supervised orthologous group
PAMIAFPB_02371	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_02372	0.0	-	-	-	E	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_02373	1.39e-129	cah	4.2.1.1	-	P	ko:K01673	ko00910,map00910	ko00000,ko00001,ko01000	Reversible hydration of carbon dioxide
PAMIAFPB_02374	1.7e-29	-	-	-	-	-	-	-	-
PAMIAFPB_02375	1.44e-121	-	-	-	C	-	-	-	Nitroreductase family
PAMIAFPB_02376	3.12e-68	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_02377	7.14e-185	-	-	-	S	-	-	-	NADP oxidoreductase coenzyme F420-dependent
PAMIAFPB_02378	1.46e-123	kdsC	3.1.3.45	-	S	ko:K03270	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family
PAMIAFPB_02379	4.57e-126	maf	-	-	D	ko:K06287	-	ko00000	COG0424 Nucleotide-binding protein implicated in inhibition of septum formation
PAMIAFPB_02380	2.17e-313	-	-	-	L	-	-	-	COG COG3666 Transposase and inactivated derivatives
PAMIAFPB_02381	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
PAMIAFPB_02382	1.96e-251	-	-	-	P	-	-	-	phosphate-selective porin O and P
PAMIAFPB_02383	1.84e-198	-	-	-	P	ko:K02051	-	ko00000,ko00002,ko02000	NMT1/THI5 like
PAMIAFPB_02384	3.7e-297	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Psort location Cytoplasmic, score
PAMIAFPB_02385	4.5e-164	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PAMIAFPB_02386	2.5e-297	-	-	-	EGP	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02387	2.76e-247	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PAMIAFPB_02388	1.67e-249	-	-	-	M	-	-	-	Gram-negative bacterial TonB protein C-terminal
PAMIAFPB_02389	5.79e-43	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02390	2.91e-181	-	-	-	S	-	-	-	hydrolases of the HAD superfamily
PAMIAFPB_02392	2.92e-70	-	-	-	S	-	-	-	COG NOG30624 non supervised orthologous group
PAMIAFPB_02393	2.19e-130	ruvC	3.1.22.4	-	L	ko:K01159	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
PAMIAFPB_02394	0.0	pulA	3.2.1.41	CBM48,GH13	G	ko:K01200	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
PAMIAFPB_02395	0.0	modF	-	-	P	ko:K05776	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC molybdenum transporter, ATP-binding subunit modF
PAMIAFPB_02396	0.0	-	-	-	T	-	-	-	Psort location CytoplasmicMembrane, score 7.88
PAMIAFPB_02397	4.07e-185	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PAMIAFPB_02398	1.97e-257	fbaB	4.1.2.13	-	G	ko:K11645	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	COG COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes
PAMIAFPB_02399	1.84e-155	tal	2.2.1.2	-	F	ko:K00616,ko:K08314	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PAMIAFPB_02400	7.74e-231	-	-	-	L	-	-	-	COG NOG21178 non supervised orthologous group
PAMIAFPB_02401	2.27e-134	-	-	-	K	-	-	-	COG NOG19120 non supervised orthologous group
PAMIAFPB_02402	0.0	kpsD	-	-	M	-	-	-	COG1596 Periplasmic protein involved in polysaccharide export
PAMIAFPB_02403	1.23e-156	-	-	-	M	-	-	-	Chain length determinant protein
PAMIAFPB_02404	6.3e-201	-	-	-	E	-	-	-	DegT/DnrJ/EryC1/StrS aminotransferase family
PAMIAFPB_02405	5.47e-32	-	-	-	J	-	-	-	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PAMIAFPB_02406	6.57e-25	-	-	-	IQ	-	-	-	Phosphopantetheine attachment site
PAMIAFPB_02407	8.96e-111	-	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
PAMIAFPB_02408	5.87e-100	-	-	-	IQ	-	-	-	COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)
PAMIAFPB_02409	1.4e-29	-	-	-	IQ	-	-	-	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PAMIAFPB_02410	1.71e-43	-	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	FabA-like domain
PAMIAFPB_02411	1.11e-72	-	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
PAMIAFPB_02412	1.02e-70	-	2.2.1.1	-	G	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transketolase, thiamine diphosphate binding domain
PAMIAFPB_02413	1.23e-112	-	2.2.1.1	-	G	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transketolase
PAMIAFPB_02414	9.75e-166	fadD	-	-	IQ	-	-	-	AMP-binding enzyme
PAMIAFPB_02415	1.37e-173	-	-	-	H	-	-	-	Acyl-protein synthetase, LuxE
PAMIAFPB_02416	4.71e-43	-	-	-	C	-	-	-	Acyl-CoA reductase (LuxC)
PAMIAFPB_02417	1.65e-45	-	-	-	C	-	-	-	Acyl-CoA reductase (LuxC)
PAMIAFPB_02418	3.41e-48	-	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
PAMIAFPB_02419	6.74e-108	rfbC	5.1.3.13	-	G	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PAMIAFPB_02421	1.1e-108	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PAMIAFPB_02422	2.13e-169	rfbA	2.7.7.24	-	H	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PAMIAFPB_02423	1.38e-83	-	-	-	S	-	-	-	Membrane protein involved in the export of O-antigen and teichoic acid
PAMIAFPB_02425	1.73e-14	-	-	-	S	-	-	-	Protein conserved in bacteria
PAMIAFPB_02426	4.66e-26	-	-	-	-	-	-	-	-
PAMIAFPB_02427	1.17e-129	-	-	GT4	M	ko:K13004	-	ko00000,ko01000,ko01003,ko01005	Glycosyltransferase, group 1 family protein
PAMIAFPB_02428	2.29e-214	tagO	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02429	1.58e-96	-	3.5.1.28	-	V	ko:K01447	-	ko00000,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02431	2.14e-99	-	-	-	L	-	-	-	regulation of translation
PAMIAFPB_02432	5.04e-47	-	-	-	S	-	-	-	Domain of unknown function (DUF4248)
PAMIAFPB_02433	0.0	-	-	-	L	-	-	-	COG NOG25561 non supervised orthologous group
PAMIAFPB_02434	1.07e-149	-	-	-	L	-	-	-	VirE N-terminal domain protein
PAMIAFPB_02436	0.0	-	3.1.6.1	-	P	ko:K01130	ko00140,ko00600,map00140,map00600	ko00000,ko00001,ko01000	Arylsulfatase
PAMIAFPB_02437	0.0	-	-	-	T	-	-	-	COG COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
PAMIAFPB_02438	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02439	5.71e-181	hddC	-	-	JM	-	-	-	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon)
PAMIAFPB_02440	0.0	-	-	-	G	-	-	-	Glycosyl hydrolases family 18
PAMIAFPB_02441	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_02442	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_02443	0.0	-	-	-	G	-	-	-	Domain of unknown function (DUF5014)
PAMIAFPB_02444	0.0	betC_2	-	-	P	-	-	-	COG COG3119 Arylsulfatase A and related enzymes
PAMIAFPB_02445	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain
PAMIAFPB_02446	0.0	lacZ	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	COG3250 Beta-galactosidase beta-glucuronidase
PAMIAFPB_02447	0.0	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	F5 8 type C domain protein
PAMIAFPB_02448	0.0	-	-	-	P	-	-	-	COG COG3119 Arylsulfatase A and related enzymes
PAMIAFPB_02449	2.82e-280	ybdG_1	-	-	M	ko:K16053	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02450	0.0	-	3.1.6.1	-	P	ko:K01130	ko00140,ko00600,map00140,map00600	ko00000,ko00001,ko01000	Arylsulfatase
PAMIAFPB_02451	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 20, catalytic domain
PAMIAFPB_02452	0.0	-	-	-	E	ko:K21572	-	ko00000,ko02000	Pfam:SusD
PAMIAFPB_02453	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_02454	1.51e-233	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PAMIAFPB_02455	2.01e-121	-	-	-	K	ko:K03088	-	ko00000,ko03021	ECF sigma factor
PAMIAFPB_02456	4.06e-248	-	-	-	S	-	-	-	Endonuclease Exonuclease phosphatase family
PAMIAFPB_02457	0.0	pepD_1	-	-	E	ko:K01270	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02458	2.76e-126	-	-	-	M	ko:K06142	-	ko00000	membrane
PAMIAFPB_02459	1.66e-73	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_02460	3.57e-62	-	-	-	D	-	-	-	Septum formation initiator
PAMIAFPB_02461	0.0	dnaX	2.7.7.7	-	H	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PAMIAFPB_02462	5.09e-49	-	-	-	KT	-	-	-	PspC domain protein
PAMIAFPB_02464	1.92e-266	-	-	-	M	ko:K07282	-	ko00000	Bacterial capsule synthesis protein
PAMIAFPB_02465	4.54e-207	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PAMIAFPB_02466	0.0	ccp	1.11.1.5	-	C	ko:K00428	-	ko00000,ko01000	Psort location Periplasmic, score
PAMIAFPB_02467	2.72e-192	ycf	-	-	O	-	-	-	COG COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component
PAMIAFPB_02468	1.46e-207	-	-	-	O	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02469	6.22e-302	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PAMIAFPB_02470	3.29e-297	-	-	-	V	-	-	-	MATE efflux family protein
PAMIAFPB_02471	0.0	-	-	-	T	-	-	-	COG0642 Signal transduction histidine kinase
PAMIAFPB_02472	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_02473	0.0	-	3.1.6.6	-	P	ko:K01133	-	ko00000,ko01000	COG COG3119 Arylsulfatase A and related enzymes
PAMIAFPB_02474	0.0	rho	-	-	K	ko:K03628	ko03018,map03018	ko00000,ko00001,ko03019,ko03021	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PAMIAFPB_02475	7.18e-233	-	-	-	C	-	-	-	4Fe-4S binding domain
PAMIAFPB_02476	2.37e-308	tilS	6.3.4.19	-	D	ko:K04075	-	ko00000,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PAMIAFPB_02477	0.0	feoB	-	-	P	ko:K04759	-	ko00000,ko02000	transporter of a GTP-driven Fe(2 ) uptake system
PAMIAFPB_02478	5.7e-48	-	-	-	-	-	-	-	-
PAMIAFPB_02480	1.52e-109	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_02481	2.74e-129	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_02482	1.74e-90	-	-	-	V	-	-	-	N-acetylmuramoyl-L-alanine amidase
PAMIAFPB_02484	3.45e-05	-	-	-	-	-	-	-	-
PAMIAFPB_02486	2.85e-207	-	-	-	-	-	-	-	-
PAMIAFPB_02487	6.63e-90	-	-	-	S	-	-	-	Phage minor structural protein
PAMIAFPB_02490	8.77e-230	-	-	-	-	-	-	-	-
PAMIAFPB_02491	0.0	-	-	-	S	-	-	-	Phage-related minor tail protein
PAMIAFPB_02492	1.51e-106	-	-	-	-	-	-	-	-
PAMIAFPB_02493	4.45e-66	-	-	-	-	-	-	-	-
PAMIAFPB_02499	9.26e-116	-	-	-	S	-	-	-	KAP family P-loop domain
PAMIAFPB_02503	3.17e-09	-	-	-	-	-	-	-	-
PAMIAFPB_02504	2.82e-35	-	-	-	-	-	-	-	-
PAMIAFPB_02505	8.54e-120	-	-	-	-	-	-	-	-
PAMIAFPB_02506	1.37e-54	-	-	-	-	-	-	-	-
PAMIAFPB_02507	7.17e-272	-	-	-	-	-	-	-	-
PAMIAFPB_02511	0.0	-	-	-	-	-	-	-	-
PAMIAFPB_02513	1.91e-115	-	-	-	-	-	-	-	-
PAMIAFPB_02514	2.11e-101	-	-	-	-	-	-	-	-
PAMIAFPB_02515	2.62e-257	-	-	-	-	-	-	-	-
PAMIAFPB_02516	2.15e-133	-	-	-	S	-	-	-	Phage prohead protease, HK97 family
PAMIAFPB_02518	2.25e-47	-	-	-	-	-	-	-	-
PAMIAFPB_02519	8.51e-54	-	-	-	-	-	-	-	-
PAMIAFPB_02524	5.58e-177	-	-	-	-	-	-	-	-
PAMIAFPB_02531	2.47e-89	-	-	-	S	-	-	-	Protein of unknown function (DUF2829)
PAMIAFPB_02533	0.0	-	-	-	L	-	-	-	DNA primase
PAMIAFPB_02538	3.89e-45	-	-	-	K	-	-	-	helix_turn_helix, Lux Regulon
PAMIAFPB_02541	2.44e-64	-	-	-	-	-	-	-	-
PAMIAFPB_02543	5.29e-70	-	-	-	S	-	-	-	Protein of unknown function (DUF3408)
PAMIAFPB_02544	7.07e-88	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02545	2.28e-257	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_02546	2.68e-142	-	-	-	L	ko:K04096	-	ko00000	Rossmann fold nucleotide-binding protein involved in DNA uptake
PAMIAFPB_02548	2.9e-31	-	3.1.3.18	-	S	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	HAD hydrolase, family IA, variant 3
PAMIAFPB_02549	1.13e-70	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02550	2.88e-29	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02551	5.77e-49	-	-	-	-	-	-	-	-
PAMIAFPB_02552	7.47e-12	-	-	-	L	-	-	-	Phage integrase SAM-like domain
PAMIAFPB_02554	6.16e-109	-	-	-	S	-	-	-	Domain of unknown function (DUF4145)
PAMIAFPB_02555	2.69e-51	-	-	-	K	-	-	-	nucleotide-binding protein containing TIR -like domain
PAMIAFPB_02557	0.0	-	-	-	L	-	-	-	Transposase IS66 family
PAMIAFPB_02558	5.14e-71	-	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 like protein
PAMIAFPB_02559	8.52e-83	-	-	-	L	ko:K07497	-	ko00000	transposase activity
PAMIAFPB_02560	0.0	-	-	-	S	-	-	-	TonB-dependent Receptor Plug Domain
PAMIAFPB_02561	3.65e-58	-	-	-	-	-	-	-	-
PAMIAFPB_02562	1.87e-164	-	-	-	-	-	-	-	-
PAMIAFPB_02563	3.79e-20	-	-	-	S	-	-	-	Fic/DOC family
PAMIAFPB_02565	3.83e-104	-	-	-	-	-	-	-	-
PAMIAFPB_02566	1.77e-187	-	-	-	K	-	-	-	YoaP-like
PAMIAFPB_02567	7.81e-128	-	-	-	-	-	-	-	-
PAMIAFPB_02568	4.52e-89	-	-	-	-	-	-	-	-
PAMIAFPB_02569	1.99e-33	-	-	-	-	-	-	-	-
PAMIAFPB_02570	1.09e-10	-	-	-	S	-	-	-	Domain of unknown function (DUF4252)
PAMIAFPB_02571	6.42e-18	-	-	-	C	-	-	-	lyase activity
PAMIAFPB_02572	2.97e-28	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
PAMIAFPB_02574	4.77e-178	-	-	-	EG	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02576	3.49e-130	-	-	-	CO	-	-	-	Redoxin family
PAMIAFPB_02577	1.47e-170	cypM_1	-	-	H	-	-	-	Methyltransferase domain protein
PAMIAFPB_02578	7.45e-33	-	-	-	-	-	-	-	-
PAMIAFPB_02579	1.41e-103	-	-	-	-	-	-	-	-
PAMIAFPB_02580	4.86e-13	gloA	4.4.1.5	-	E	ko:K01759	ko00620,map00620	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02581	7.84e-264	-	-	-	S	ko:K03646	-	ko00000,ko02000	Domain of unknown function (DUF4468) with TBP-like fold
PAMIAFPB_02582	1.19e-177	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02583	8.79e-156	pdxH	1.4.3.5	-	H	ko:K00275	ko00750,ko01100,ko01120,map00750,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP)
PAMIAFPB_02584	3.04e-171	-	-	-	S	ko:K06911	-	ko00000	Belongs to the pirin family
PAMIAFPB_02585	6.95e-238	ldhA	1.1.1.28	-	C	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAMIAFPB_02586	0.0	-	-	-	I	ko:K06076	-	ko00000,ko02000	COG COG2067 Long-chain fatty acid transport protein
PAMIAFPB_02587	0.0	-	-	-	S	-	-	-	COG NOG10142 non supervised orthologous group
PAMIAFPB_02588	1.59e-115	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PAMIAFPB_02589	6.46e-83	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2141)
PAMIAFPB_02590	0.0	-	-	-	P	-	-	-	Outer membrane protein beta-barrel family
PAMIAFPB_02591	1.71e-131	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_02592	5.64e-59	marR	-	-	K	-	-	-	Winged helix DNA-binding domain
PAMIAFPB_02593	2.68e-152	yhhQ	-	-	S	ko:K09125	-	ko00000	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
PAMIAFPB_02594	6.11e-138	queC	6.3.4.20	-	F	ko:K06920	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
PAMIAFPB_02595	4.2e-110	queF	1.7.1.13	-	H	ko:K09457	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
PAMIAFPB_02596	5.07e-150	-	-	-	S	ko:K06950	-	ko00000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02597	4.56e-110	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PAMIAFPB_02598	1.43e-82	-	-	-	S	-	-	-	COG NOG32209 non supervised orthologous group
PAMIAFPB_02599	1.91e-198	nadC	2.4.2.19	-	H	ko:K00767	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NadC ModD family
PAMIAFPB_02600	2.2e-123	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PAMIAFPB_02601	3.03e-220	-	-	-	K	-	-	-	COG NOG25837 non supervised orthologous group
PAMIAFPB_02602	1.18e-126	-	-	-	S	-	-	-	COG NOG28799 non supervised orthologous group
PAMIAFPB_02604	1.14e-170	-	-	-	S	-	-	-	COG NOG28261 non supervised orthologous group
PAMIAFPB_02605	4.97e-220	fabK	1.3.1.9	-	C	ko:K02371	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	related to 2-nitropropane dioxygenase
PAMIAFPB_02606	1.2e-260	ald	1.4.1.1	-	C	ko:K00259	ko00250,ko00430,ko01100,map00250,map00430,map01100	ko00000,ko00001,ko01000	Belongs to the AlaDH PNT family
PAMIAFPB_02607	2.28e-208	-	-	-	E	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_02608	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_02609	0.0	-	-	-	O	-	-	-	non supervised orthologous group
PAMIAFPB_02610	0.0	-	-	-	M	-	-	-	Peptidase, M23 family
PAMIAFPB_02611	0.0	-	-	-	M	-	-	-	Dipeptidase
PAMIAFPB_02612	0.0	pgcA	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain II
PAMIAFPB_02613	4.18e-282	-	-	-	S	ko:K07148	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02614	2.88e-237	oatA	-	-	I	-	-	-	Acyltransferase family
PAMIAFPB_02615	1.18e-138	-	-	-	T	-	-	-	COG COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
PAMIAFPB_02616	7.83e-197	nudC	3.6.1.22	-	L	ko:K03426	ko00760,ko01100,ko04146,map00760,map01100,map04146	ko00000,ko00001,ko01000	COG COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding
PAMIAFPB_02617	0.0	-	-	-	S	-	-	-	COG COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PAMIAFPB_02618	0.0	merA	-	-	C	ko:K21739	-	ko00000	COG COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
PAMIAFPB_02619	1.17e-132	ykgB	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
PAMIAFPB_02620	1.77e-197	-	-	-	K	-	-	-	COG COG2207 AraC-type DNA-binding domain-containing proteins
PAMIAFPB_02621	7.97e-108	cdd	3.5.4.5	-	F	ko:K01489	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
PAMIAFPB_02622	1.38e-221	lytG	-	-	MNU	-	-	-	COG1705 Muramidase (flagellum-specific)
PAMIAFPB_02623	0.0	ndh	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase, FAD-containing subunit
PAMIAFPB_02624	1.11e-280	-	-	-	M	ko:K02005	-	ko00000	Efflux transporter, RND family, MFP subunit
PAMIAFPB_02625	4.3e-151	ytrE_3	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score 7.88
PAMIAFPB_02626	4.66e-119	-	-	-	S	-	-	-	COG NOG30399 non supervised orthologous group
PAMIAFPB_02627	4.36e-301	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02628	2.87e-309	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score
PAMIAFPB_02629	0.0	-	-	-	T	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_02630	0.0	-	-	-	MU	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_02631	3.43e-315	-	-	-	T	ko:K02481	-	ko00000,ko02022	acetoacetate metabolism regulatory protein AtoC K07714
PAMIAFPB_02632	3.32e-301	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_02633	0.0	-	-	-	M	-	-	-	COG NOG06397 non supervised orthologous group
PAMIAFPB_02634	0.0	ino1	5.5.1.4	-	I	ko:K01858	ko00521,ko00562,ko01100,ko01130,map00521,map00562,map01100,map01130	ko00000,ko00001,ko01000	Inositol-3-phosphate synthase
PAMIAFPB_02635	2.79e-112	pgpA	3.1.3.27	-	I	ko:K01095	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02636	1.7e-106	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_02637	1.19e-153	pgsA1	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PAMIAFPB_02638	6.83e-224	-	-	-	I	-	-	-	Inositolphosphotransferase 1, involved in synthesis of mannose-(inositol-P)2-ceramide (M(IP)2C), which is the most abundant sphingolipid in cells, mutation confers resistance to the antifungals syringomycin E and DmAMP1 in some growth media
PAMIAFPB_02639	1.45e-216	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02640	2.94e-48	-	-	-	K	-	-	-	Fic/DOC family
PAMIAFPB_02641	2.09e-113	-	3.5.1.28	-	V	ko:K01447	-	ko00000,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02642	9.07e-61	-	-	-	-	-	-	-	-
PAMIAFPB_02643	2.01e-102	-	-	-	L	-	-	-	DNA-binding protein
PAMIAFPB_02644	0.0	-	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
PAMIAFPB_02645	1.58e-153	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02646	2.52e-66	-	-	-	S	-	-	-	Domain of unknown function (DUF4248)
PAMIAFPB_02648	1.07e-221	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_02650	0.0	-	-	-	N	-	-	-	bacterial-type flagellum assembly
PAMIAFPB_02651	9.66e-115	-	-	-	-	-	-	-	-
PAMIAFPB_02652	4.9e-264	-	-	-	M	-	-	-	COG2885 Outer membrane protein and related peptidoglycan-associated
PAMIAFPB_02653	8.05e-17	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_02654	1.15e-151	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_02655	0.0	-	-	-	N	-	-	-	bacterial-type flagellum assembly
PAMIAFPB_02656	3.68e-251	-	-	-	M	-	-	-	COG2885 Outer membrane protein and related peptidoglycan-associated
PAMIAFPB_02657	0.0	rng	-	-	J	ko:K08301	-	ko00000,ko01000,ko03009,ko03019	S1 RNA binding domain
PAMIAFPB_02658	1.66e-56	hupA	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Belongs to the bacterial histone-like protein family
PAMIAFPB_02659	5.35e-254	mutY	-	-	L	ko:K03575	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	COG1194 A G-specific DNA glycosylase
PAMIAFPB_02660	5.6e-98	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Single-stranded DNA-binding protein
PAMIAFPB_02661	1.8e-306	gldE	-	-	S	-	-	-	Gliding motility-associated protein GldE
PAMIAFPB_02662	1.38e-142	sfp	-	-	H	-	-	-	Belongs to the P-Pant transferase superfamily
PAMIAFPB_02663	5.14e-50	-	-	-	S	-	-	-	Divergent 4Fe-4S mono-cluster
PAMIAFPB_02664	2.81e-68	-	-	-	S	ko:K06975	-	ko00000	GCN5-related N-acetyl-transferase
PAMIAFPB_02665	0.0	tnaA	4.1.99.1	-	E	ko:K01667	ko00380,map00380	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02666	2.99e-74	-	-	-	S	-	-	-	Domain of unknown function (DUF4465)
PAMIAFPB_02667	0.0	-	-	-	S	-	-	-	COG NOG23380 non supervised orthologous group
PAMIAFPB_02668	0.0	-	-	-	H	-	-	-	COG4206 Outer membrane cobalamin receptor protein
PAMIAFPB_02669	9.56e-127	-	-	-	H	-	-	-	COG4206 Outer membrane cobalamin receptor protein
PAMIAFPB_02670	4.78e-203	-	-	-	S	-	-	-	Cell surface protein
PAMIAFPB_02671	0.0	-	-	-	T	-	-	-	Domain of unknown function (DUF5074)
PAMIAFPB_02672	0.0	-	-	-	T	-	-	-	Domain of unknown function (DUF5074)
PAMIAFPB_02673	1.61e-225	-	-	-	CO	-	-	-	COG NOG24939 non supervised orthologous group
PAMIAFPB_02674	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02675	0.0	-	2.7.13.3	-	T	ko:K02484,ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_02676	2.21e-157	srrA	-	-	K	ko:K07657,ko:K07658	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PAMIAFPB_02677	4.91e-284	-	-	-	T	-	-	-	COG NOG06399 non supervised orthologous group
PAMIAFPB_02678	1.58e-199	-	-	-	S	-	-	-	COG NOG25193 non supervised orthologous group
PAMIAFPB_02679	0.0	yfmR	-	-	S	ko:K15738	-	ko00000,ko02000	ABC transporter, ATP-binding protein
PAMIAFPB_02680	9.25e-214	-	3.1.3.15	-	E	ko:K04486	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02681	7.19e-300	-	-	-	G	-	-	-	COG2407 L-fucose isomerase and related
PAMIAFPB_02682	7.09e-294	aspC	2.6.1.1, 2.6.1.2, 2.6.1.66	-	E	ko:K00812,ko:K14260	ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I II
PAMIAFPB_02683	9.17e-284	lolE_1	-	-	M	ko:K09808	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG4591 ABC-type transport system, involved in lipoprotein release, permease component
PAMIAFPB_02684	0.0	-	-	-	F	-	-	-	Belongs to the D-alanine--D-alanine ligase family
PAMIAFPB_02685	9.53e-107	-	-	-	K	-	-	-	This enzyme acetylates the N-terminal alanine of ribosomal protein S18
PAMIAFPB_02686	8.48e-286	-	-	-	M	-	-	-	Glycosyltransferase, group 2 family protein
PAMIAFPB_02687	4.63e-231	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02688	1.09e-292	-	-	-	T	-	-	-	COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation
PAMIAFPB_02689	0.0	-	-	-	T	-	-	-	COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains
PAMIAFPB_02690	3.97e-283	-	-	-	MU	ko:K12340	ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133	ko00000,ko00001,ko00002,ko01504,ko02000,ko02044	outer membrane efflux protein
PAMIAFPB_02691	1.34e-265	-	-	-	M	ko:K02005	-	ko00000	Efflux transporter, RND family, MFP subunit
PAMIAFPB_02692	1.23e-163	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAMIAFPB_02693	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, permease protein
PAMIAFPB_02694	2.85e-07	-	-	-	-	-	-	-	-
PAMIAFPB_02695	3.44e-114	-	-	-	E	-	-	-	Acetyltransferase (GNAT) domain
PAMIAFPB_02696	2.61e-133	-	2.3.1.18, 2.3.1.79	-	S	ko:K00633,ko:K00661	-	ko00000,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_02697	4.06e-107	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
PAMIAFPB_02698	1.47e-72	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02699	0.0	-	-	-	P	-	-	-	Carboxypeptidase regulatory-like domain
PAMIAFPB_02700	2.03e-226	-	-	-	T	-	-	-	Histidine kinase
PAMIAFPB_02701	6.44e-263	ypdA_4	-	-	T	-	-	-	Histidine kinase
PAMIAFPB_02702	1.31e-164	-	-	-	K	-	-	-	COG3279 Response regulator of the LytR AlgR family
PAMIAFPB_02703	5.1e-109	trxA2	-	-	O	-	-	-	Psort location Cytoplasmic, score 9.26
PAMIAFPB_02704	0.0	rtcB_2	6.5.1.3	-	S	ko:K14415	-	ko00000,ko01000,ko03016	tRNA-splicing ligase RtcB
PAMIAFPB_02705	8.81e-148	prfH	-	-	J	ko:K02839	-	ko00000,ko03012	RF-1 domain
PAMIAFPB_02706	0.0	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
PAMIAFPB_02707	0.0	-	-	-	M	-	-	-	COG NOG23378 non supervised orthologous group
PAMIAFPB_02708	8.57e-145	-	-	-	M	-	-	-	non supervised orthologous group
PAMIAFPB_02709	0.0	-	2.1.3.15, 6.4.1.3	-	I	ko:K01966	ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	COG COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
PAMIAFPB_02710	0.0	-	6.3.4.14, 6.4.1.2, 6.4.1.3	-	I	ko:K01961,ko:K01965	ko00061,ko00280,ko00620,ko00630,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Biotin carboxylase
PAMIAFPB_02711	1.02e-119	-	6.4.1.1	-	I	ko:K01960	ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Biotin carboxyl carrier protein
PAMIAFPB_02712	0.0	-	-	-	T	-	-	-	Psort location CytoplasmicMembrane, score 7.88
PAMIAFPB_02713	2.94e-155	bioD	6.3.3.3	-	H	ko:K01935	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
PAMIAFPB_02714	1.29e-190	bioC	2.1.1.197, 3.1.1.85	-	H	ko:K02169,ko:K09789	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway
PAMIAFPB_02715	2.61e-160	-	3.1.1.85	-	S	ko:K09789	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	Protein of unknown function (DUF452)
PAMIAFPB_02716	1.5e-276	bioF	2.3.1.29, 2.3.1.47	-	H	ko:K00639,ko:K00652	ko00260,ko00780,ko01100,map00260,map00780,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	COG COG0156 7-keto-8-aminopelargonate synthetase and related enzymes
PAMIAFPB_02717	0.0	bioA	2.6.1.62	-	H	ko:K00833	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a
PAMIAFPB_02718	6.01e-269	-	-	-	N	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_02719	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_02720	0.0	-	-	-	E	ko:K21572	-	ko00000,ko02000	COG NOG25454 non supervised orthologous group
PAMIAFPB_02721	4.43e-270	fsr	-	-	G	ko:K08223	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02722	9.54e-265	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
PAMIAFPB_02723	1.3e-26	-	-	-	S	-	-	-	Transglycosylase associated protein
PAMIAFPB_02724	5.01e-44	-	-	-	-	-	-	-	-
PAMIAFPB_02725	2.31e-244	-	-	-	K	ko:K02529	-	ko00000,ko03000	Psort location Cytoplasmic, score
PAMIAFPB_02726	3.54e-188	uxuB	-	-	IQ	-	-	-	Oxidoreductase, short chain dehydrogenase reductase family protein
PAMIAFPB_02727	9.55e-287	uxuA	4.2.1.8	-	H	ko:K01686	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the dehydration of D-mannonate
PAMIAFPB_02728	5.46e-136	-	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	COG0847 DNA polymerase III epsilon subunit and related 3'-5'
PAMIAFPB_02729	2.94e-197	-	-	-	K	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02730	1.02e-97	-	-	-	S	-	-	-	Pyridoxamine 5'-phosphate oxidase like
PAMIAFPB_02731	4.22e-59	ycnE	-	-	S	-	-	-	Antibiotic biosynthesis monooxygenase
PAMIAFPB_02732	4.16e-196	-	-	-	S	-	-	-	RteC protein
PAMIAFPB_02733	1.85e-121	-	-	-	S	-	-	-	Protein of unknown function (DUF1062)
PAMIAFPB_02734	1.88e-155	-	-	-	S	ko:K09807	-	ko00000	Protein of unknown function (DUF541)
PAMIAFPB_02735	4.88e-140	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02736	3.36e-20	-	-	-	H	-	-	-	COG NOG08812 non supervised orthologous group
PAMIAFPB_02737	5.9e-79	-	-	-	-	-	-	-	-
PAMIAFPB_02738	6.77e-71	-	-	-	-	-	-	-	-
PAMIAFPB_02739	0.0	-	-	-	P	ko:K02014	-	ko00000,ko02000	COG COG1629 Outer membrane receptor proteins, mostly Fe transport
PAMIAFPB_02740	1.27e-115	-	-	-	S	-	-	-	Domain of unknown function (DUF4625)
PAMIAFPB_02741	7.04e-150	nrfH	-	-	C	ko:K15876	ko00910,ko01120,map00910,map01120	ko00000,ko00001,ko00002	COG COG3005 Nitrate TMAO reductases, membrane-bound tetraheme cytochrome c subunit
PAMIAFPB_02742	0.0	nrfA	1.7.2.2	-	C	ko:K03385	ko00910,ko01120,ko05132,map00910,map01120,map05132	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
PAMIAFPB_02743	1.43e-290	ccs1	-	-	O	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02744	4.19e-197	ycf	-	-	O	-	-	-	COG COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component
PAMIAFPB_02745	0.0	-	-	-	M	-	-	-	COG NOG37029 non supervised orthologous group
PAMIAFPB_02746	2.3e-159	-	-	-	K	-	-	-	COG COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
PAMIAFPB_02747	4.67e-132	ywqN	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02748	1.97e-125	ogt	2.1.1.63	-	H	ko:K00567,ko:K10778	-	ko00000,ko01000,ko03000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PAMIAFPB_02749	1.25e-203	-	2.5.1.105	-	S	ko:K06897	ko00790,map00790	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02750	1.33e-227	-	-	-	H	-	-	-	Homocysteine S-methyltransferase
PAMIAFPB_02751	0.0	-	-	-	M	ko:K08676	-	ko00000,ko01000,ko01002	Tricorn protease homolog
PAMIAFPB_02752	0.0	-	-	-	I	-	-	-	BadF/BadG/BcrA/BcrD ATPase family
PAMIAFPB_02753	5.29e-145	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAMIAFPB_02754	1.38e-148	-	-	-	S	-	-	-	Membrane
PAMIAFPB_02755	1.61e-197	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PAMIAFPB_02756	0.0	dxs2	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PAMIAFPB_02757	3.47e-243	-	-	-	S	ko:K06889	-	ko00000	COG COG1073 Hydrolases of the alpha beta superfamily
PAMIAFPB_02758	6.72e-137	-	-	-	M	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02759	1.72e-282	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	COG COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
PAMIAFPB_02760	1.26e-216	-	-	-	K	-	-	-	transcriptional regulator (AraC family)
PAMIAFPB_02761	4.21e-214	-	-	-	C	-	-	-	Flavodoxin
PAMIAFPB_02762	2.4e-275	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Cupin domain
PAMIAFPB_02763	1.96e-208	-	-	-	M	-	-	-	ompA family
PAMIAFPB_02764	9.06e-108	-	-	-	M	-	-	-	Outer membrane protein beta-barrel domain
PAMIAFPB_02765	2.89e-203	-	-	-	P	ko:K07217	-	ko00000	Manganese containing catalase
PAMIAFPB_02766	5.06e-45	-	-	-	-	-	-	-	-
PAMIAFPB_02767	1.11e-31	-	-	-	S	-	-	-	Transglycosylase associated protein
PAMIAFPB_02768	1.72e-50	-	-	-	S	-	-	-	YtxH-like protein
PAMIAFPB_02770	5.43e-166	-	-	-	S	ko:K07058	-	ko00000	Virulence factor BrkB
PAMIAFPB_02771	1.12e-244	-	-	-	M	-	-	-	ompA family
PAMIAFPB_02772	1.91e-107	-	-	-	S	-	-	-	COG NOG17277 non supervised orthologous group
PAMIAFPB_02773	7.62e-126	-	-	-	T	-	-	-	COG COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
PAMIAFPB_02774	1.06e-69	sugE	-	-	P	ko:K11741	-	ko00000,ko02000	Multidrug resistance protein, SMR family
PAMIAFPB_02775	1.55e-309	-	-	-	V	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02776	1.23e-124	-	-	-	T	-	-	-	Cyclic nucleotide-monophosphate binding domain
PAMIAFPB_02777	1.07e-209	-	-	-	K	-	-	-	methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC XylS family)
PAMIAFPB_02778	1.91e-98	-	-	-	S	-	-	-	Pyridoxamine 5'-phosphate oxidase like
PAMIAFPB_02779	1.4e-198	-	-	-	S	-	-	-	aldo keto reductase family
PAMIAFPB_02780	9.6e-143	-	-	-	S	-	-	-	DJ-1/PfpI family
PAMIAFPB_02783	3.74e-206	purU	3.5.1.10	-	F	ko:K01433	ko00630,ko00670,map00630,map00670	ko00000,ko00001,ko01000	Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4)
PAMIAFPB_02784	6.26e-143	hisH	-	-	E	ko:K02501	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PAMIAFPB_02785	2.31e-173	hisA	5.3.1.16	-	E	ko:K01814	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PAMIAFPB_02786	1.33e-178	hisF	-	-	E	ko:K02500	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PAMIAFPB_02787	8.17e-147	hisI	3.5.4.19, 3.6.1.31	-	E	ko:K11755	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	belongs to the PRA-CH family
PAMIAFPB_02788	2.59e-171	ftsE	-	-	D	ko:K09812	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03036	Psort location CytoplasmicMembrane, score 7.88
PAMIAFPB_02789	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
PAMIAFPB_02790	1.4e-282	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PAMIAFPB_02791	1.38e-112	ftnA	1.16.3.2	-	P	ko:K02217	-	ko00000,ko01000	Iron-storage protein
PAMIAFPB_02792	2.07e-80	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_02793	1.71e-283	kbl	2.3.1.29	-	H	ko:K00639	ko00260,map00260	ko00000,ko00001,ko01000,ko01007	Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA
PAMIAFPB_02794	1.34e-232	ltd	-	-	M	-	-	-	NAD dependent epimerase dehydratase family
PAMIAFPB_02795	4.74e-208	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02796	3.9e-243	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
PAMIAFPB_02797	8.77e-189	lipB	3.1.4.55	-	S	ko:K06167	ko00440,map00440	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02798	0.0	-	-	-	S	-	-	-	COG NOG25407 non supervised orthologous group
PAMIAFPB_02799	4.55e-83	-	-	-	L	-	-	-	COG NOG19098 non supervised orthologous group
PAMIAFPB_02800	9.85e-261	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PAMIAFPB_02801	3.42e-187	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	COG0847 DNA polymerase III epsilon subunit and related 3'-5'
PAMIAFPB_02802	2.07e-282	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PAMIAFPB_02803	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
PAMIAFPB_02804	1.82e-174	trmH	2.1.1.185	-	J	ko:K03218,ko:K03437	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PAMIAFPB_02805	0.0	-	-	-	O	-	-	-	COG COG0457 FOG TPR repeat
PAMIAFPB_02806	2.66e-132	-	-	-	K	-	-	-	KOW (Kyprides, Ouzounis, Woese) motif.
PAMIAFPB_02807	1.17e-84	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02808	0.0	kpsD	-	-	M	-	-	-	COG1596 Periplasmic protein involved in polysaccharide export
PAMIAFPB_02809	1.21e-155	-	-	-	M	-	-	-	Chain length determinant protein
PAMIAFPB_02810	2.71e-168	-	-	-	V	-	-	-	COG NOG25117 non supervised orthologous group
PAMIAFPB_02811	2.04e-65	-	-	-	S	-	-	-	Polysaccharide pyruvyl transferase
PAMIAFPB_02812	1.87e-70	-	-	-	M	-	-	-	Glycosyl transferases group 1
PAMIAFPB_02813	5.72e-29	-	-	-	S	-	-	-	Hexapeptide repeat of succinyl-transferase
PAMIAFPB_02814	1.18e-54	-	-	-	-	-	-	-	-
PAMIAFPB_02817	7.41e-78	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PAMIAFPB_02818	1.51e-26	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PAMIAFPB_02819	5.81e-143	-	-	-	S	ko:K07011	-	ko00000	glycosyl transferase family 2
PAMIAFPB_02820	1.29e-141	-	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_02821	1.44e-132	rfbC	5.1.3.13	-	G	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PAMIAFPB_02824	7.23e-73	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
PAMIAFPB_02826	2.17e-81	ridA	3.5.99.10	-	J	ko:K09022	-	ko00000,ko01000	endoribonuclease L-PSP
PAMIAFPB_02827	0.0	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Folylpolyglutamate synthase
PAMIAFPB_02828	1.07e-314	ybeZ_1	-	-	T	ko:K07175	-	ko00000	ATPase related to phosphate starvation-inducible protein PhoH
PAMIAFPB_02829	1.31e-218	preA	1.3.98.1	-	F	ko:K00226	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of dihydroorotate to orotate
PAMIAFPB_02830	2.05e-159	yggS	-	-	S	ko:K06997	-	ko00000	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PAMIAFPB_02831	3.26e-111	-	-	-	S	-	-	-	COG NOG14445 non supervised orthologous group
PAMIAFPB_02832	1.08e-125	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02833	1.08e-113	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PAMIAFPB_02834	2.87e-215	-	-	-	M	-	-	-	COG NOG19097 non supervised orthologous group
PAMIAFPB_02835	1.84e-150	dedA	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_02836	5.29e-274	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02837	0.0	glnS	6.1.1.18	-	J	ko:K01886	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glutamine--tRNA ligase
PAMIAFPB_02838	9.72e-186	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	COG0226 ABC-type phosphate transport system, periplasmic component
PAMIAFPB_02839	5.82e-272	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
PAMIAFPB_02840	2.31e-199	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02841	5.87e-178	pstB	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PAMIAFPB_02842	2.12e-155	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
PAMIAFPB_02843	1.65e-140	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	COG0307 Riboflavin synthase alpha chain
PAMIAFPB_02844	3.01e-114	-	-	-	C	-	-	-	Nitroreductase family
PAMIAFPB_02845	1.08e-306	yihY	-	-	S	ko:K07058	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02846	2.72e-237	ykfC	-	-	M	-	-	-	NlpC P60 family protein
PAMIAFPB_02847	2.36e-268	ykfB	5.1.1.20, 5.1.1.3	-	M	ko:K01776,ko:K19802	ko00471,ko01100,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the mandelate racemase muconate lactonizing enzyme family
PAMIAFPB_02848	0.0	htrA	-	-	O	-	-	-	Psort location Periplasmic, score
PAMIAFPB_02849	5.16e-189	rpoD	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PAMIAFPB_02850	2.82e-119	-	-	-	S	-	-	-	L,D-transpeptidase catalytic domain
PAMIAFPB_02851	2.63e-82	-	-	-	S	-	-	-	COG NOG31446 non supervised orthologous group
PAMIAFPB_02852	1.53e-251	-	-	-	S	-	-	-	Clostripain family
PAMIAFPB_02854	1.39e-141	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_02855	2.95e-30	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02856	7.32e-54	-	-	-	M	-	-	-	Leucine rich repeats (6 copies)
PAMIAFPB_02860	1.64e-179	cbiO	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score
PAMIAFPB_02861	2.89e-123	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02862	1.79e-75	-	-	-	K	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02863	5.44e-23	-	-	-	-	-	-	-	-
PAMIAFPB_02864	4.87e-85	-	-	-	-	-	-	-	-
PAMIAFPB_02865	4.84e-106	-	-	-	C	ko:K02121	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002	COG NOG11642 non supervised orthologous group
PAMIAFPB_02866	6.12e-194	-	-	-	C	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02867	0.0	atpA	3.6.3.14, 3.6.3.15	-	C	ko:K02117	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit
PAMIAFPB_02868	0.0	ntpB	-	-	C	ko:K02118	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002	ATP synthase alpha beta family, nucleotide-binding domain protein
PAMIAFPB_02869	5.05e-131	-	-	-	C	ko:K02120	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02870	0.0	-	-	-	C	ko:K02123	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002	Belongs to the V-ATPase 116 kDa subunit family
PAMIAFPB_02871	8.7e-95	ntpK	-	-	C	ko:K02124	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002	COG COG0636 F0F1-type ATP synthase, subunit c Archaeal vacuolar-type H -ATPase, subunit K
PAMIAFPB_02872	4.47e-68	-	2.4.1.11	GT3	G	ko:K00693	ko00500,ko01100,ko04151,ko04152,ko04910,ko04922,ko04931,map00500,map01100,map04151,map04152,map04910,map04922,map04931	ko00000,ko00001,ko01000,ko01003	Starch synthase
PAMIAFPB_02873	0.0	-	2.4.1.11	GT3	G	ko:K00693	ko00500,ko01100,ko04151,ko04152,ko04910,ko04922,ko04931,map00500,map01100,map04151,map04152,map04910,map04922,map04931	ko00000,ko00001,ko01000,ko01003	Starch synthase
PAMIAFPB_02874	0.0	glgP	2.4.1.1, 2.4.1.11, 2.4.1.8	GH65,GT3,GT35	G	ko:K00688,ko:K00691,ko:K16153	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	ko00000,ko00001,ko01000,ko01003	COG0058 Glucan phosphorylase
PAMIAFPB_02875	2.51e-259	-	-	-	O	-	-	-	Antioxidant, AhpC TSA family
PAMIAFPB_02876	0.0	potA	3.6.3.31	-	P	ko:K10112,ko:K11072,ko:K17324	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PAMIAFPB_02877	2.14e-176	-	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02878	7.28e-174	ydcV	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, permease protein
PAMIAFPB_02879	0.0	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Psort location Periplasmic, score 9.44
PAMIAFPB_02880	5.95e-145	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02881	6.68e-143	-	-	-	S	-	-	-	Domain of unknown function (DUF4840)
PAMIAFPB_02883	0.0	-	-	-	T	-	-	-	helix_turn_helix, arabinose operon control protein
PAMIAFPB_02885	7.03e-193	-	-	-	G	-	-	-	Glycosyl hydrolases family 18
PAMIAFPB_02886	0.0	-	-	-	G	-	-	-	Glycosyl hydrolases family 18
PAMIAFPB_02887	5.78e-311	-	-	-	S	-	-	-	Domain of unknown function (DUF4973)
PAMIAFPB_02888	3.84e-232	-	-	-	G	-	-	-	Putative glycoside hydrolase Family 18, chitinase_18
PAMIAFPB_02889	0.0	-	-	-	S	-	-	-	Susd and RagB outer membrane lipoprotein
PAMIAFPB_02890	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_02891	8.37e-232	-	-	-	PT	-	-	-	Sigma factor regulatory protein, FecR PupR family
PAMIAFPB_02892	1.88e-124	rpoE3	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
PAMIAFPB_02893	3.27e-312	fucP	-	-	G	ko:K02429	-	ko00000,ko02000	L-fucose H symporter permease
PAMIAFPB_02894	6.84e-90	-	5.1.3.32	-	G	ko:K03534	-	ko00000,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02895	0.0	fucK	2.7.1.5, 2.7.1.51	-	G	ko:K00848,ko:K00879	ko00040,ko00051,ko01120,map00040,map00051,map01120	ko00000,ko00001,ko01000	Involved in the catabolism of L-rhamnose (6-deoxy-L- mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate
PAMIAFPB_02896	2.24e-153	fucA	4.1.1.104	-	G	ko:K22130	-	ko00000,ko01000	L-fuculose-phosphate aldolase, aldolase class II family
PAMIAFPB_02897	0.0	fucI	5.3.1.25, 5.3.1.3	-	G	ko:K01818	ko00051,ko01120,map00051,map01120	ko00000,ko00001,ko01000	Converts the aldose L-fucose into the corresponding ketose L-fuculose
PAMIAFPB_02898	8.45e-238	-	-	-	K	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02899	1.87e-88	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
PAMIAFPB_02901	1.23e-293	mleN	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter
PAMIAFPB_02902	1.16e-243	-	-	-	M	-	-	-	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMIAFPB_02903	0.0	-	-	-	V	-	-	-	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMIAFPB_02904	1.65e-303	-	-	-	MU	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_02905	1e-246	-	-	-	T	-	-	-	Histidine kinase
PAMIAFPB_02906	3.16e-189	-	-	-	K	ko:K02477	-	ko00000,ko02022	LytTr DNA-binding domain protein
PAMIAFPB_02907	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_02908	8.97e-150	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_02909	1.45e-124	-	3.5.1.124	-	S	ko:K05520	-	ko00000,ko01000,ko01002	DJ-1 PfpI family protein
PAMIAFPB_02910	3.72e-80	-	-	-	K	-	-	-	Transcriptional regulator, HxlR family
PAMIAFPB_02911	0.0	-	-	-	E	-	-	-	Peptidase, S9A B C family, catalytic domain protein
PAMIAFPB_02912	6.22e-242	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PAMIAFPB_02913	6.77e-105	yvbK	2.3.1.82	-	K	ko:K03827,ko:K18815	-	br01600,ko00000,ko01000,ko01504	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02914	4.68e-109	-	-	-	E	-	-	-	Appr-1-p processing protein
PAMIAFPB_02915	1.32e-62	-	-	-	S	-	-	-	Protein of unknown function (DUF2089)
PAMIAFPB_02916	1.17e-137	-	-	-	-	-	-	-	-
PAMIAFPB_02917	7.75e-313	creD	-	-	V	ko:K06143	-	ko00000	COG COG4452 Inner membrane protein involved in colicin E2 resistance
PAMIAFPB_02918	5.33e-63	-	-	-	K	-	-	-	Winged helix DNA-binding domain
PAMIAFPB_02919	3.31e-120	-	-	-	Q	-	-	-	membrane
PAMIAFPB_02920	1.17e-96	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PAMIAFPB_02921	3.47e-303	-	-	-	MU	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_02922	1.1e-226	-	-	-	V	ko:K03543	-	ko00000,ko00002,ko02000	Auxiliary transport protein, membrane fusion protein (MFP) family protein
PAMIAFPB_02923	0.0	-	-	-	EGP	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02924	0.0	-	-	-	P	-	-	-	TonB-dependent Receptor Plug Domain
PAMIAFPB_02925	0.0	uxaA	4.2.1.42, 4.2.1.7	-	G	ko:K01685,ko:K01708	ko00040,ko00053,ko01100,map00040,map00053,map01100	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02926	1.98e-259	-	-	-	K	ko:K02529	-	ko00000,ko03000	Psort location Cytoplasmic, score
PAMIAFPB_02927	1.95e-248	-	2.7.1.45	-	G	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Kinase, PfkB family
PAMIAFPB_02928	7.79e-164	eda	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	KDPG and KHG aldolase
PAMIAFPB_02930	8.4e-51	-	-	-	-	-	-	-	-
PAMIAFPB_02931	1.76e-68	-	-	-	S	-	-	-	Conserved protein
PAMIAFPB_02932	2.6e-135	-	-	-	U	-	-	-	Psort location CytoplasmicMembrane, score 9.46
PAMIAFPB_02933	8.6e-157	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02934	0.0	cobN	6.6.1.2	-	H	ko:K02230	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko01000	COG1429 Cobalamin biosynthesis protein CobN and related
PAMIAFPB_02935	0.0	hmuR	-	-	P	ko:K16089	-	ko00000,ko02000	COG4771 Outer membrane receptor for ferrienterochelin and colicins
PAMIAFPB_02936	1.83e-156	-	-	-	S	-	-	-	HmuY protein
PAMIAFPB_02937	1.75e-171	-	-	-	S	-	-	-	Calycin-like beta-barrel domain
PAMIAFPB_02938	7.38e-195	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02939	1.26e-129	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
PAMIAFPB_02940	6.36e-60	-	-	-	-	-	-	-	-
PAMIAFPB_02941	1.73e-116	-	-	-	M	-	-	-	Protein of unknown function (DUF3575)
PAMIAFPB_02942	1.64e-199	-	-	-	S	-	-	-	Domain of unknown function (DUF5119)
PAMIAFPB_02943	1.26e-273	-	-	-	S	-	-	-	Fimbrillin-like
PAMIAFPB_02944	8.92e-48	-	-	-	S	-	-	-	Fimbrillin-like
PAMIAFPB_02946	2.79e-105	-	-	-	S	-	-	-	Domain of unknown function (DUF4469) with IG-like fold
PAMIAFPB_02947	8.85e-192	czcD	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
PAMIAFPB_02948	0.0	-	-	-	H	-	-	-	CarboxypepD_reg-like domain
PAMIAFPB_02949	2.48e-243	-	-	-	S	-	-	-	SusD family
PAMIAFPB_02950	9.46e-187	-	-	-	S	-	-	-	Domain of unknown function (DUF4929)
PAMIAFPB_02951	0.0	-	-	-	S	ko:K07263	-	ko00000,ko01000,ko01002	Peptidase M16 inactive domain
PAMIAFPB_02952	1.01e-178	-	-	-	S	-	-	-	Haem-binding uptake, Tiki superfamily, ChaN
PAMIAFPB_02953	0.0	-	-	-	P	ko:K07085	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02954	0.0	-	-	-	P	ko:K16089	-	ko00000,ko02000	COG4771 Outer membrane receptor for ferrienterochelin and colicins
PAMIAFPB_02955	4.67e-71	-	-	-	-	-	-	-	-
PAMIAFPB_02956	0.0	-	-	-	P	ko:K16089	-	ko00000,ko02000	COG4771 Outer membrane receptor for ferrienterochelin and colicins
PAMIAFPB_02957	3.95e-138	-	-	-	S	-	-	-	Bacteriocin-protection, YdeI or OmpD-Associated
PAMIAFPB_02958	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain
PAMIAFPB_02959	2.34e-141	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAMIAFPB_02960	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
PAMIAFPB_02961	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
PAMIAFPB_02962	1.39e-281	-	-	-	C	-	-	-	radical SAM domain protein
PAMIAFPB_02963	3.07e-98	-	-	-	-	-	-	-	-
PAMIAFPB_02965	0.0	ccsA	-	-	O	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02966	2.34e-264	-	-	-	J	-	-	-	endoribonuclease L-PSP
PAMIAFPB_02967	1.84e-98	-	-	-	-	-	-	-	-
PAMIAFPB_02968	6.75e-274	-	-	-	P	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_02969	0.0	-	-	-	C	-	-	-	Di-haem oxidoreductase, putative peroxidase
PAMIAFPB_02971	8.03e-170	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.97
PAMIAFPB_02972	2.41e-285	-	-	-	S	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_02973	1.21e-242	-	1.8.5.2	-	S	ko:K16936,ko:K16937	ko00920,ko01120,map00920,map01120	ko00000,ko00001,ko01000	TQO small subunit DoxD
PAMIAFPB_02974	4.1e-84	-	-	-	S	-	-	-	Protein of unknown function (DUF2023)
PAMIAFPB_02975	1.93e-121	fldA	-	-	C	ko:K03839	-	ko00000	Low-potential electron donor to a number of redox enzymes
PAMIAFPB_02976	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4114)
PAMIAFPB_02977	9.57e-288	purH2	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	COG0138 AICAR transformylase IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
PAMIAFPB_02978	8.38e-169	-	-	-	D	ko:K07322	-	ko00000	Hemerythrin HHE cation binding domain protein
PAMIAFPB_02979	1.51e-133	-	-	-	K	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_02980	2.62e-145	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 9.26
PAMIAFPB_02981	2.41e-174	-	-	-	M	-	-	-	probably involved in cell wall biogenesis
PAMIAFPB_02982	8.32e-243	-	-	-	M	-	-	-	COG COG2148 Sugar transferases involved in lipopolysaccharide synthesis
PAMIAFPB_02983	3.5e-81	-	-	-	T	-	-	-	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PAMIAFPB_02985	0.0	-	-	-	S	-	-	-	COG NOG06028 non supervised orthologous group
PAMIAFPB_02986	1.14e-254	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase, type I
PAMIAFPB_02987	1.88e-29	trpA	4.2.1.20	-	E	ko:K01695	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PAMIAFPB_02988	1.37e-138	trpA	4.2.1.20	-	E	ko:K01695	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PAMIAFPB_02989	8.15e-149	trpF	5.3.1.24	-	E	ko:K01817	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TrpF family
PAMIAFPB_02990	1.77e-174	trpC	4.1.1.48	-	E	ko:K01609	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TrpC family
PAMIAFPB_02991	4.34e-236	trpD	2.4.2.18, 4.1.3.27	-	F	ko:K00766,ko:K13497	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PAMIAFPB_02992	9.68e-134	trpG	2.6.1.85, 4.1.3.27	-	EH	ko:K01658,ko:K01664	ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	Glutamine amidotransferase, class I
PAMIAFPB_02993	0.0	trpE	4.1.3.27	-	EH	ko:K01657	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	Anthranilate synthase component I
PAMIAFPB_02994	1.04e-288	trpB	4.2.1.20, 5.3.1.24	-	E	ko:K01696,ko:K01817	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PAMIAFPB_02995	2.22e-21	-	-	-	-	-	-	-	-
PAMIAFPB_02996	5.87e-277	yqhD	-	-	C	ko:K08325	ko00640,map00640	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_02997	1.11e-313	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
PAMIAFPB_02998	0.0	-	-	-	P	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_02999	2.83e-167	cypM_2	-	-	Q	-	-	-	Nodulation protein S (NodS)
PAMIAFPB_03000	4.62e-304	-	3.2.1.40	-	G	ko:K05989	-	ko00000,ko01000	Alpha-L-rhamnosidase N-terminal domain
PAMIAFPB_03001	1.15e-170	-	-	-	G	-	-	-	Glycosylase
PAMIAFPB_03002	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 2, sugar binding domain protein
PAMIAFPB_03003	1.29e-186	-	-	-	M	-	-	-	Pectate lyase superfamily protein
PAMIAFPB_03004	0.0	-	3.2.1.40	-	G	ko:K05989	-	ko00000,ko01000	Bacterial alpha-L-rhamnosidase C-terminal domain
PAMIAFPB_03005	3.44e-208	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	Ppx GppA phosphatase family
PAMIAFPB_03006	0.0	ppk	2.7.4.1	-	H	ko:K00937	ko00190,ko03018,map00190,map03018	ko00000,ko00001,ko01000,ko03019	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PAMIAFPB_03007	2.44e-129	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03008	0.0	glnA	6.3.1.2	-	S	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	Glutamate--ammonia ligase, catalytic domain protein
PAMIAFPB_03009	0.0	amt	-	-	P	ko:K03320	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03010	5.03e-75	glnB	-	-	K	ko:K04751	ko02020,map02020	ko00000,ko00001	Belongs to the P(II) protein family
PAMIAFPB_03011	2.31e-174	-	-	-	S	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_03012	1.21e-311	dapL	2.6.1.83	-	H	ko:K10206	ko00300,ko01100,ko01110,ko01130,ko01230,map00300,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate
PAMIAFPB_03013	5.49e-195	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PAMIAFPB_03014	4.04e-67	-	-	-	CO	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Thioredoxin
PAMIAFPB_03015	3.68e-173	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
PAMIAFPB_03016	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase, glutamine-hydrolyzing
PAMIAFPB_03017	1.85e-292	gltD	1.4.1.13, 1.4.1.14	-	E	ko:K00266	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	COG0493 NADPH-dependent glutamate synthase beta chain and related
PAMIAFPB_03018	1.02e-29	gltD	1.4.1.13, 1.4.1.14	-	E	ko:K00266	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	COG0493 NADPH-dependent glutamate synthase beta chain and related
PAMIAFPB_03019	0.0	gltB	1.4.1.13, 1.4.1.14, 1.4.7.1	-	E	ko:K00265,ko:K00284	ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	Class II glutamine amidotransferase
PAMIAFPB_03020	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PAMIAFPB_03021	0.0	purF	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03022	2.36e-291	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the CarA family
PAMIAFPB_03023	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ)
PAMIAFPB_03024	1.84e-262	manC	2.7.7.13	-	M	ko:K00971	ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110	ko00000,ko00001,ko00002,ko01000	mannose-1-phosphate guanylyltransferase
PAMIAFPB_03025	4.74e-211	-	-	-	K	-	-	-	transcriptional regulator (AraC family)
PAMIAFPB_03026	1.45e-290	-	-	-	MU	-	-	-	COG NOG26656 non supervised orthologous group
PAMIAFPB_03027	1.29e-207	-	-	-	M	ko:K01993	-	ko00000	COG COG0845 Membrane-fusion protein
PAMIAFPB_03028	0.0	-	-	-	G	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAMIAFPB_03029	5.86e-238	ybhS	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03030	8.71e-258	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03031	2.2e-85	hsp20	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
PAMIAFPB_03032	5.64e-99	-	-	-	J	-	-	-	Threonine alanine tRNA ligase second additional domain protein
PAMIAFPB_03033	0.0	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03034	0.0	-	-	-	-	-	-	-	-
PAMIAFPB_03035	3.9e-50	-	-	-	-	-	-	-	-
PAMIAFPB_03036	5.42e-71	-	-	-	-	-	-	-	-
PAMIAFPB_03037	1.3e-130	-	-	-	L	-	-	-	Phage integrase family
PAMIAFPB_03038	0.0	-	-	-	M	ko:K07001	-	ko00000	Patatin-like phospholipase
PAMIAFPB_03040	1.24e-43	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PAMIAFPB_03041	3.33e-76	-	-	-	S	-	-	-	Region found in RelA / SpoT proteins
PAMIAFPB_03042	3.04e-06	-	-	-	J	-	-	-	Threonine alanine tRNA ligase second additional domain protein
PAMIAFPB_03043	3.31e-146	sanA	-	-	S	ko:K03748	-	ko00000	Psort location CytoplasmicMembrane, score 9.82
PAMIAFPB_03044	9.07e-158	-	-	-	S	-	-	-	Domain of unknown function (DUF4919)
PAMIAFPB_03045	7.53e-161	-	-	-	E	-	-	-	COG2755 Lysophospholipase L1 and related
PAMIAFPB_03046	3.46e-05	-	-	-	-	-	-	-	-
PAMIAFPB_03047	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PAMIAFPB_03048	0.0	-	6.2.1.30	-	H	ko:K01912	ko00360,ko01120,ko05111,map00360,map01120,map05111	ko00000,ko00001,ko01000	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
PAMIAFPB_03049	1.02e-94	-	-	-	S	-	-	-	ACT domain protein
PAMIAFPB_03050	1.62e-187	yfiO	-	-	S	ko:K05807	-	ko00000,ko02000	outer membrane assembly lipoprotein YfiO
PAMIAFPB_03051	4.8e-72	rpoZ	-	-	S	-	-	-	COG NOG14434 non supervised orthologous group
PAMIAFPB_03052	2.75e-95	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_03053	8.63e-165	-	-	-	S	-	-	-	Outer membrane protein beta-barrel domain
PAMIAFPB_03054	0.0	lysM	-	-	M	-	-	-	LysM domain
PAMIAFPB_03055	0.0	uvrA2	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PAMIAFPB_03056	3.97e-112	ybaK	-	-	H	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PAMIAFPB_03057	0.0	-	-	-	P	ko:K03305	-	ko00000	amino acid peptide transporter
PAMIAFPB_03058	5.36e-122	paiA	-	-	K	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03059	1.11e-84	-	-	-	K	ko:K10947	-	ko00000,ko03000	transcriptional regulator PadR family
PAMIAFPB_03060	8.05e-239	-	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03061	2.68e-255	-	-	-	S	-	-	-	of the beta-lactamase fold
PAMIAFPB_03062	6.48e-125	-	-	-	S	-	-	-	COG COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
PAMIAFPB_03063	1.76e-160	-	-	-	-	-	-	-	-
PAMIAFPB_03064	0.0	pop	-	-	EU	-	-	-	Peptidase, S9A B C family, catalytic domain protein
PAMIAFPB_03065	7.51e-316	-	-	-	V	-	-	-	MATE efflux family protein
PAMIAFPB_03066	0.0	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins
PAMIAFPB_03067	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PAMIAFPB_03068	0.0	-	-	-	M	-	-	-	Protein of unknown function (DUF3078)
PAMIAFPB_03069	2.3e-184	-	-	-	L	-	-	-	COG NOG19076 non supervised orthologous group
PAMIAFPB_03070	2.03e-80	-	-	-	S	-	-	-	WYL_2, Sm-like SH3 beta-barrel fold
PAMIAFPB_03071	6.53e-89	-	-	-	S	-	-	-	Domain of unknown function, B. Theta Gene description (DUF4119)
PAMIAFPB_03072	6.64e-233	-	-	-	L	-	-	-	COG NOG21178 non supervised orthologous group
PAMIAFPB_03073	1.73e-138	-	-	-	K	-	-	-	KOW (Kyprides, Ouzounis, Woese) motif.
PAMIAFPB_03074	2.59e-78	-	-	-	S	-	-	-	UpxZ family of transcription anti-terminator antagonists
PAMIAFPB_03075	0.0	wbpM	-	-	GM	-	-	-	Polysaccharide biosynthesis protein
PAMIAFPB_03076	3.12e-290	ugd	1.1.1.22	-	C	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PAMIAFPB_03077	1.7e-35	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03078	8.3e-274	-	-	-	GM	-	-	-	Polysaccharide biosynthesis protein
PAMIAFPB_03079	2.6e-278	-	-	-	E	-	-	-	Belongs to the DegT DnrJ EryC1 family
PAMIAFPB_03084	1.22e-117	neuC	5.1.3.14	-	M	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	UDP-N-acetylglucosamine 2-epimerase
PAMIAFPB_03086	1.12e-30	-	-	-	V	-	-	-	Peptidogalycan biosysnthesis/recognition
PAMIAFPB_03087	1.09e-149	neuB	2.5.1.101, 2.5.1.56	-	M	ko:K01654,ko:K18430	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03088	2.14e-110	neuA	2.7.7.43	-	M	ko:K00983	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Cytidylyltransferase
PAMIAFPB_03089	8.66e-206	gmhB	2.7.7.71	-	M	ko:K15669	ko00540,map00540	ko00000,ko00001,ko01000	Nucleotidyl transferase
PAMIAFPB_03091	1.85e-51	-	-	-	C	-	-	-	Polysaccharide pyruvyl transferase
PAMIAFPB_03092	1.17e-80	-	-	-	C	-	-	-	hydrogenase beta subunit
PAMIAFPB_03093	7.85e-105	-	-	-	C	-	-	-	Polysaccharide pyruvyl transferase
PAMIAFPB_03094	2.56e-111	-	-	-	C	-	-	-	coenzyme F420-reducing hydrogenase beta subunit
PAMIAFPB_03096	1.42e-24	-	-	-	HJ	-	-	-	Sugar-transfer associated ATP-grasp
PAMIAFPB_03098	4.66e-156	-	-	-	U	ko:K03980	-	ko00000,ko01011,ko02000	MviN-like protein
PAMIAFPB_03101	2.45e-66	-	-	-	M	-	-	-	Glycosyl transferases group 1
PAMIAFPB_03102	1.24e-41	-	-	-	H	-	-	-	Bacterial transferase hexapeptide (six repeats)
PAMIAFPB_03105	1.7e-151	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PAMIAFPB_03106	7.3e-137	-	-	-	M	-	-	-	Bacterial sugar transferase
PAMIAFPB_03107	1.64e-289	pglE	-	-	E	-	-	-	Belongs to the DegT DnrJ EryC1 family
PAMIAFPB_03108	3.63e-170	-	-	-	M	ko:K01991	ko02026,map02026	ko00000,ko00001,ko02000	COG1596 Periplasmic protein involved in polysaccharide export
PAMIAFPB_03109	0.0	-	-	-	DM	-	-	-	Chain length determinant protein
PAMIAFPB_03110	2.5e-108	-	-	-	L	-	-	-	COG NOG29624 non supervised orthologous group
PAMIAFPB_03111	1.93e-09	-	-	-	-	-	-	-	-
PAMIAFPB_03112	2.21e-89	-	-	-	T	ko:K03803	-	ko00000,ko03021	Positive regulator of sigma(E), RseC MucC
PAMIAFPB_03113	9.62e-177	rnfB	-	-	C	ko:K03616	-	ko00000	electron transport complex, RnfABCDGE type, B subunit
PAMIAFPB_03114	0.0	rnfC	-	-	C	ko:K03615	-	ko00000	Part of a membrane complex involved in electron transport
PAMIAFPB_03115	1.69e-232	rnfD	-	-	C	ko:K03614	-	ko00000	Part of a membrane complex involved in electron transport
PAMIAFPB_03116	1.43e-152	rnfG	-	-	C	ko:K03612	-	ko00000	Part of a membrane complex involved in electron transport
PAMIAFPB_03117	1.92e-127	rnfE	-	-	C	ko:K03613	-	ko00000	Part of a membrane complex involved in electron transport
PAMIAFPB_03118	1.99e-118	rnfA	-	-	C	ko:K03617	-	ko00000	Part of a membrane complex involved in electron transport
PAMIAFPB_03119	8.59e-249	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
PAMIAFPB_03120	5.52e-203	ispE	2.7.1.148	-	F	ko:K00919	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PAMIAFPB_03121	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
PAMIAFPB_03123	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Psort location Cytoplasmic, score
PAMIAFPB_03124	2.39e-76	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Psort location Cytoplasmic, score
PAMIAFPB_03125	1.98e-178	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
PAMIAFPB_03126	1.63e-56	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03127	2.26e-286	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	Metal ion transporter, metal ion (Mn2 Fe2 ) transporter (Nramp) family
PAMIAFPB_03128	5.95e-192	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Psort location Cytoplasmic, score 9.97
PAMIAFPB_03129	1.35e-102	-	-	-	S	-	-	-	COG NOG16874 non supervised orthologous group
PAMIAFPB_03131	4.95e-40	-	-	-	S	-	-	-	COG NOG33517 non supervised orthologous group
PAMIAFPB_03132	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PAMIAFPB_03133	3.99e-271	-	-	-	P	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_03134	1.25e-112	nhaA	-	-	P	ko:K03313	-	ko00000,ko02000	) H( ) antiporter that extrudes sodium in exchange for external protons
PAMIAFPB_03135	2.69e-147	nhaA	-	-	P	ko:K03313	-	ko00000,ko02000	) H( ) antiporter that extrudes sodium in exchange for external protons
PAMIAFPB_03136	9.89e-83	-	-	-	K	-	-	-	Transcriptional regulator, BlaI MecI CopY family
PAMIAFPB_03137	0.0	-	-	-	KT	-	-	-	Peptidase, M56 family
PAMIAFPB_03138	3.34e-256	rmuC	-	-	S	ko:K09760	-	ko00000	RmuC family
PAMIAFPB_03139	1.92e-209	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Psort location Cytoplasmic, score
PAMIAFPB_03140	1.85e-150	-	-	-	S	-	-	-	Domain of unknown function (DUF4858)
PAMIAFPB_03141	0.0	-	-	-	C	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03142	2.1e-99	-	-	-	-	-	-	-	-
PAMIAFPB_03143	5.82e-221	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PAMIAFPB_03144	0.0	rumA	2.1.1.190	-	H	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PAMIAFPB_03145	0.0	ppdK	2.7.9.1	-	G	ko:K01006	ko00620,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the PEP-utilizing enzyme family
PAMIAFPB_03146	5.73e-120	-	-	-	M	-	-	-	Outer membrane protein beta-barrel domain
PAMIAFPB_03147	3.93e-134	-	-	-	M	-	-	-	COG NOG19089 non supervised orthologous group
PAMIAFPB_03148	1.26e-145	thiE	2.5.1.3	-	H	ko:K00788	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Thiamine monophosphate synthase TENI
PAMIAFPB_03149	3.15e-162	moeZ	2.7.7.80, 2.8.1.11	-	H	ko:K21029,ko:K21147	ko04122,map04122	ko00000,ko00001,ko01000	involved in molybdopterin and thiamine biosynthesis family 2
PAMIAFPB_03150	4.62e-279	thiH	4.1.99.19	-	C	ko:K03150	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Thiazole biosynthesis protein ThiH
PAMIAFPB_03151	0.0	thiC	4.1.99.17	-	H	ko:K03147	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PAMIAFPB_03152	3.52e-177	thiG	2.8.1.10	-	H	ko:K03149	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
PAMIAFPB_03153	2.93e-143	thiE	2.5.1.3	-	H	ko:K00788	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PAMIAFPB_03154	2.87e-39	thiS	-	-	H	ko:K03154	ko04122,map04122	ko00000,ko00001	thiamine biosynthesis protein ThiS
PAMIAFPB_03155	0.0	-	-	-	T	-	-	-	histidine kinase DNA gyrase B
PAMIAFPB_03156	4.04e-148	sodB	1.15.1.1	-	C	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	ko00000,ko00001,ko01000	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
PAMIAFPB_03157	0.0	-	-	-	M	-	-	-	COG3209 Rhs family protein
PAMIAFPB_03158	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
PAMIAFPB_03159	2.86e-122	-	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score 9.46
PAMIAFPB_03160	3.31e-252	-	-	-	S	-	-	-	TolB-like 6-blade propeller-like
PAMIAFPB_03161	6.58e-275	-	-	-	S	-	-	-	ATPase (AAA superfamily)
PAMIAFPB_03163	5.51e-280	-	-	-	-	-	-	-	-
PAMIAFPB_03164	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat
PAMIAFPB_03166	8.58e-69	-	-	-	S	-	-	-	Domain of unknown function (DUF4934)
PAMIAFPB_03167	1.3e-84	-	-	-	S	-	-	-	Domain of unknown function (DUF4934)
PAMIAFPB_03168	7.09e-82	-	-	-	-	-	-	-	-
PAMIAFPB_03171	5.91e-261	-	-	-	S	-	-	-	Domain of unknown function (DUF4934)
PAMIAFPB_03172	9.12e-91	-	-	-	-	-	-	-	-
PAMIAFPB_03173	1.25e-133	-	-	-	S	-	-	-	Domain of unknown function (DUF4934)
PAMIAFPB_03174	3.87e-154	-	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PAMIAFPB_03175	0.0	-	-	-	E	-	-	-	non supervised orthologous group
PAMIAFPB_03176	8.35e-256	-	-	-	M	-	-	-	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMIAFPB_03177	0.0	-	-	-	V	-	-	-	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMIAFPB_03178	0.0	-	-	-	MU	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_03179	0.0	-	-	-	V	-	-	-	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMIAFPB_03180	6e-61	-	-	-	S	-	-	-	Flavodoxin-like fold
PAMIAFPB_03181	3.88e-58	-	-	-	S	-	-	-	Flavodoxin-like fold
PAMIAFPB_03182	6.93e-284	nspC	4.1.1.96	-	E	ko:K13747	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03189	1.57e-280	-	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
PAMIAFPB_03190	2.84e-284	-	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
PAMIAFPB_03191	3.13e-83	-	-	-	O	-	-	-	Glutaredoxin
PAMIAFPB_03192	3.22e-287	czcC	-	-	MU	ko:K15725	-	ko00000,ko02000	Outer membrane efflux protein
PAMIAFPB_03193	1.36e-254	czcB	-	-	M	ko:K15727	-	ko00000,ko02000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMIAFPB_03194	0.0	czcA_1	-	-	P	ko:K15726	-	ko00000,ko02000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMIAFPB_03195	1.02e-297	arlS_2	-	-	T	-	-	-	histidine kinase DNA gyrase B
PAMIAFPB_03196	1.66e-159	cusR	-	-	T	ko:K07665	ko02020,map02020	ko00000,ko00001,ko00002,ko01504,ko02022	Transcriptional regulatory protein, C terminal
PAMIAFPB_03197	0.0	-	3.2.1.20	GH31	S	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	COG NOG06228 non supervised orthologous group
PAMIAFPB_03198	0.0	-	6.2.1.3	-	I	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	COG COG1022 Long-chain acyl-CoA synthetases (AMP-forming)
PAMIAFPB_03199	0.0	cvrA	-	-	P	ko:K11105	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03200	1.05e-272	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease family
PAMIAFPB_03201	0.0	hcp	1.7.99.1	-	C	ko:K05601	ko00910,map00910	ko00000,ko00001,ko01000	Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O
PAMIAFPB_03202	6.59e-151	-	-	-	K	-	-	-	Crp-like helix-turn-helix domain
PAMIAFPB_03203	3.98e-313	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_03204	2.05e-315	zraR_2	-	-	T	-	-	-	COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains
PAMIAFPB_03205	9.25e-178	-	-	-	S	-	-	-	COG NOG27188 non supervised orthologous group
PAMIAFPB_03206	4.37e-201	-	-	-	S	-	-	-	Ser Thr phosphatase family protein
PAMIAFPB_03207	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03208	3.84e-154	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	bacteriocin export ABC transporter, lactococcin 972 group
PAMIAFPB_03209	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03210	0.0	-	-	-	V	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03211	1.99e-153	pgmB	-	-	S	-	-	-	HAD hydrolase, family IA, variant 3
PAMIAFPB_03212	2.4e-192	panB	2.1.2.11	-	H	ko:K00606	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate
PAMIAFPB_03213	1.34e-259	-	-	-	EGP	-	-	-	Transporter, major facilitator family protein
PAMIAFPB_03214	0.0	relA	2.7.6.5, 3.1.7.2	-	KT	ko:K00951,ko:K01139	ko00230,map00230	ko00000,ko00001,ko01000,ko03009	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PAMIAFPB_03215	0.0	-	-	-	H	-	-	-	COG NOG06391 non supervised orthologous group
PAMIAFPB_03216	7.56e-154	cat	2.3.1.28	-	V	ko:K19271	-	br01600,ko00000,ko01000,ko01504	Chloramphenicol acetyltransferase
PAMIAFPB_03217	1.71e-305	-	-	-	NU	-	-	-	Lipid A 3-O-deacylase (PagL)
PAMIAFPB_03218	4.69e-282	purT	2.1.2.2	-	F	ko:K08289	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PAMIAFPB_03219	1.89e-232	-	-	-	M	-	-	-	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
PAMIAFPB_03220	4.58e-07	-	-	-	-	-	-	-	-
PAMIAFPB_03221	4.49e-104	-	-	-	V	-	-	-	N-acetylmuramoyl-L-alanine amidase
PAMIAFPB_03222	1.17e-96	-	-	-	L	-	-	-	Bacterial DNA-binding protein
PAMIAFPB_03223	6.4e-54	-	-	-	S	-	-	-	Domain of unknown function (DUF4248)
PAMIAFPB_03224	0.0	-	-	-	L	-	-	-	Primase C terminal 1 (PriCT-1)
PAMIAFPB_03225	6.86e-104	-	-	-	-	-	-	-	-
PAMIAFPB_03226	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PAMIAFPB_03227	5.3e-51	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	ATP synthase, delta epsilon subunit, beta-sandwich domain protein
PAMIAFPB_03228	5.76e-82	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_03229	4.73e-265	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
PAMIAFPB_03230	1.13e-40	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PAMIAFPB_03231	4.1e-93	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PAMIAFPB_03232	1.05e-127	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PAMIAFPB_03233	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PAMIAFPB_03234	3.4e-200	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PAMIAFPB_03235	0.0	-	-	-	S	-	-	-	COG NOG28036 non supervised orthologous group
PAMIAFPB_03236	0.0	uvrD2	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03237	6.15e-139	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03238	1.72e-54	-	-	-	S	-	-	-	COG NOG18433 non supervised orthologous group
PAMIAFPB_03240	5.81e-219	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PAMIAFPB_03241	2.13e-291	-	-	-	S	-	-	-	Clostripain family
PAMIAFPB_03242	1.48e-206	-	-	-	K	-	-	-	transcriptional regulator (AraC family)
PAMIAFPB_03243	8.6e-220	-	-	-	K	-	-	-	transcriptional regulator (AraC family)
PAMIAFPB_03244	3.24e-250	-	-	-	GM	-	-	-	NAD(P)H-binding
PAMIAFPB_03245	2.3e-118	-	-	-	S	-	-	-	COG NOG28927 non supervised orthologous group
PAMIAFPB_03247	1.39e-161	-	-	-	K	-	-	-	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PAMIAFPB_03248	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_03249	0.0	-	-	-	P	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_03251	1.01e-40	-	-	-	-	-	-	-	-
PAMIAFPB_03252	0.0	aspD	4.1.1.12	-	E	ko:K09758	ko00250,ko00270,ko01100,ko01230,map00250,map00270,map01100,map01230	ko00000,ko00001,ko01000	COG COG0436 Aspartate tyrosine aromatic aminotransferase
PAMIAFPB_03253	0.0	aspT	-	-	S	ko:K07085	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03254	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Formyltetrahydrofolate synthetase
PAMIAFPB_03255	2.12e-311	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PAMIAFPB_03256	1.19e-178	-	-	-	S	-	-	-	COG NOG27381 non supervised orthologous group
PAMIAFPB_03257	4.16e-135	-	-	-	S	-	-	-	COG COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
PAMIAFPB_03258	4.02e-109	pyrI	-	-	F	ko:K00610	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002	Involved in allosteric regulation of aspartate carbamoyltransferase
PAMIAFPB_03259	4.44e-224	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
PAMIAFPB_03260	0.0	mrcA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	COG5009 Membrane carboxypeptidase penicillin-binding protein
PAMIAFPB_03261	7e-80	folK2	2.7.6.3	-	H	ko:K00950	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	COG NOG22185 non supervised orthologous group
PAMIAFPB_03262	9.06e-181	kdsB	2.7.7.38	-	H	ko:K00979	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
PAMIAFPB_03263	1.13e-311	-	-	-	S	-	-	-	Peptidase M16 inactive domain
PAMIAFPB_03264	4.21e-38	-	2.7.11.1	-	S	ko:K12132	-	ko00000,ko01000,ko01001	phosphatidylinositol-4-phosphate 5-kinase family protein K00889
PAMIAFPB_03265	6.27e-219	prs	2.7.6.1	-	EF	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	COG0462 Phosphoribosylpyrophosphate synthetase
PAMIAFPB_03266	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_03267	5.42e-169	-	-	-	T	-	-	-	Response regulator receiver domain
PAMIAFPB_03268	0.0	ydaH	-	-	H	ko:K12942	-	ko00000	Psort location CytoplasmicMembrane, score
PAMIAFPB_03269	2.01e-134	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
PAMIAFPB_03270	2.44e-242	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PAMIAFPB_03271	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_03272	0.0	-	-	-	E	ko:K21572	-	ko00000,ko02000	Pfam:SusD
PAMIAFPB_03273	0.0	-	-	-	P	-	-	-	Protein of unknown function (DUF229)
PAMIAFPB_03274	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
PAMIAFPB_03276	1.87e-132	-	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
PAMIAFPB_03277	5.04e-75	-	-	-	-	-	-	-	-
PAMIAFPB_03279	5.59e-190	-	-	-	L	-	-	-	COG NOG21178 non supervised orthologous group
PAMIAFPB_03281	4e-119	-	-	-	K	-	-	-	COG NOG19120 non supervised orthologous group
PAMIAFPB_03282	2.72e-64	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03283	2.28e-101	wbpM	-	-	GM	-	-	-	Polysaccharide biosynthesis protein
PAMIAFPB_03284	8.35e-13	-	-	-	L	-	-	-	COG NOG14720 non supervised orthologous group
PAMIAFPB_03286	1.33e-122	-	-	-	L	-	-	-	COG NOG14720 non supervised orthologous group
PAMIAFPB_03289	5.47e-256	wbpM	-	-	GM	-	-	-	Polysaccharide biosynthesis protein
PAMIAFPB_03290	5.02e-234	-	5.1.3.14	-	M	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	UDP-N-acetylglucosamine 2-epimerase
PAMIAFPB_03291	4.07e-288	-	1.1.1.136, 1.1.1.336	-	M	ko:K02472,ko:K13015	ko00520,ko05111,map00520,map05111	ko00000,ko00001,ko01000,ko01005	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PAMIAFPB_03293	1.04e-136	-	-	-	S	-	-	-	Polysaccharide biosynthesis protein
PAMIAFPB_03295	3.49e-26	-	-	-	M	ko:K00713	-	ko00000,ko01000,ko01003,ko01005	Glycosyl transferases group 1
PAMIAFPB_03296	5.93e-56	-	-	-	M	-	-	-	Glycosyl transferases group 1
PAMIAFPB_03298	1.3e-130	-	-	-	M	-	-	-	Glycosyl transferases group 1
PAMIAFPB_03299	3.65e-73	-	-	-	M	-	-	-	Glycosyltransferase
PAMIAFPB_03300	1.68e-177	wecE	2.6.1.59	-	E	ko:K02805	-	ko00000,ko01000,ko01007	COGs COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
PAMIAFPB_03301	8.32e-187	rfbA	2.7.7.24	-	H	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PAMIAFPB_03302	1.46e-52	-	-	-	S	-	-	-	Hexapeptide repeat of succinyl-transferase
PAMIAFPB_03303	7.72e-178	-	-	-	S	-	-	-	WG containing repeat
PAMIAFPB_03304	1.76e-71	-	-	-	S	-	-	-	Immunity protein 17
PAMIAFPB_03305	5.57e-123	-	-	-	-	-	-	-	-
PAMIAFPB_03306	2.27e-214	-	-	-	K	-	-	-	Transcriptional regulator
PAMIAFPB_03307	3.05e-198	-	-	-	S	-	-	-	RteC protein
PAMIAFPB_03308	9.12e-93	-	-	-	S	-	-	-	Helix-turn-helix domain
PAMIAFPB_03309	0.0	-	-	-	L	-	-	-	non supervised orthologous group
PAMIAFPB_03310	1.89e-75	-	-	-	S	-	-	-	Helix-turn-helix domain
PAMIAFPB_03311	5.82e-116	-	-	-	S	-	-	-	RibD C-terminal domain
PAMIAFPB_03312	2.17e-313	-	-	-	L	-	-	-	COG COG3666 Transposase and inactivated derivatives
PAMIAFPB_03313	7.18e-86	-	-	-	S	-	-	-	Antitoxin to bacterial toxin RNase LS or RnlA
PAMIAFPB_03314	4.21e-260	-	-	-	S	-	-	-	RNase LS, bacterial toxin
PAMIAFPB_03315	1.82e-112	-	-	-	-	-	-	-	-
PAMIAFPB_03316	0.0	-	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	COG0550 Topoisomerase IA
PAMIAFPB_03317	0.0	-	-	-	S	-	-	-	COG NOG09947 non supervised orthologous group
PAMIAFPB_03318	2.75e-268	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_03319	4.04e-197	-	-	-	S	-	-	-	Protein of unknown function (DUF4241)
PAMIAFPB_03320	3.37e-138	-	-	-	-	-	-	-	-
PAMIAFPB_03321	8.92e-116	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03322	1.12e-96	-	-	-	-	-	-	-	-
PAMIAFPB_03323	1.31e-86	-	-	-	S	-	-	-	Protein of unknown function (DUF2750)
PAMIAFPB_03324	1.34e-231	-	-	-	-	-	-	-	-
PAMIAFPB_03325	1.19e-64	-	-	-	S	-	-	-	Immunity protein 17
PAMIAFPB_03326	7.07e-97	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
PAMIAFPB_03327	0.0	-	-	-	U	-	-	-	COG COG3505 Type IV secretory pathway, VirD4 components
PAMIAFPB_03329	0.0	-	-	-	U	-	-	-	Relaxase mobilization nuclease domain protein
PAMIAFPB_03330	2.38e-96	-	-	-	-	-	-	-	-
PAMIAFPB_03331	5.9e-190	-	-	-	D	-	-	-	ATPase MipZ
PAMIAFPB_03332	8.87e-88	-	-	-	S	-	-	-	Protein of unknown function (DUF3408)
PAMIAFPB_03333	2.52e-128	-	-	-	S	-	-	-	COG NOG24967 non supervised orthologous group
PAMIAFPB_03334	5.52e-61	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_03335	1.02e-71	-	-	-	S	-	-	-	COG NOG30259 non supervised orthologous group
PAMIAFPB_03336	0.0	-	-	-	U	-	-	-	Conjugation system ATPase, TraG family
PAMIAFPB_03337	6.81e-83	-	-	-	S	-	-	-	to Bacteroides thetaiotaomicron conserved protein found in conjugate transposon BT0092 SWALL AAO75199 (EMBL AE016926) (118 aa) fasta scores E()
PAMIAFPB_03338	1.06e-145	-	-	-	U	-	-	-	COG NOG09946 non supervised orthologous group
PAMIAFPB_03339	1.82e-229	-	-	-	S	-	-	-	Conjugative transposon TraJ protein
PAMIAFPB_03340	2.15e-144	-	-	-	U	-	-	-	Conjugative transposon TraK protein
PAMIAFPB_03341	9.06e-60	-	-	-	S	-	-	-	Protein of unknown function (DUF3989)
PAMIAFPB_03342	1.61e-273	-	-	-	-	-	-	-	-
PAMIAFPB_03343	0.0	traM	-	-	S	-	-	-	Conjugative transposon TraM protein
PAMIAFPB_03344	5.22e-227	-	-	-	U	-	-	-	Conjugative transposon TraN protein
PAMIAFPB_03345	1.37e-140	-	-	-	S	-	-	-	COG NOG19079 non supervised orthologous group
PAMIAFPB_03346	2.75e-105	-	-	-	S	-	-	-	conserved protein found in conjugate transposon
PAMIAFPB_03347	1.91e-157	-	-	-	-	-	-	-	-
PAMIAFPB_03348	9.56e-208	-	-	-	-	-	-	-	-
PAMIAFPB_03349	5.14e-116	-	-	-	S	-	-	-	Psort location Cytoplasmic, score
PAMIAFPB_03350	1.13e-133	-	-	-	S	-	-	-	Protein of unknown function (DUF4065)
PAMIAFPB_03351	7.61e-102	-	-	-	L	-	-	-	DNA repair
PAMIAFPB_03352	2.86e-150	-	-	-	-	-	-	-	-
PAMIAFPB_03353	0.0	-	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
PAMIAFPB_03354	3.8e-53	-	-	-	S	-	-	-	Protein of unknown function (DUF1273)
PAMIAFPB_03355	5.71e-159	-	-	-	-	-	-	-	-
PAMIAFPB_03356	7.25e-240	-	-	-	L	-	-	-	DNA primase TraC
PAMIAFPB_03357	2.67e-116	-	-	-	-	-	-	-	-
PAMIAFPB_03358	2.72e-171	-	-	-	-	-	-	-	-
PAMIAFPB_03359	1.69e-05	-	-	-	-	-	-	-	-
PAMIAFPB_03360	8.17e-147	-	-	-	-	-	-	-	-
PAMIAFPB_03363	3.75e-206	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_03364	1.12e-140	-	-	-	S	-	-	-	Domain of unknown function (DUF4948)
PAMIAFPB_03365	8.38e-233	-	-	-	S	-	-	-	competence protein
PAMIAFPB_03366	4.39e-66	-	-	-	K	-	-	-	Helix-turn-helix domain
PAMIAFPB_03367	1.47e-70	-	-	-	S	-	-	-	Helix-turn-helix domain
PAMIAFPB_03369	2.81e-136	-	-	-	F	-	-	-	ATP-grasp domain
PAMIAFPB_03370	2.92e-80	-	-	-	M	ko:K13012,ko:K19428	-	ko00000,ko01000,ko01005	COG2148 Sugar transferases involved in lipopolysaccharide synthesis
PAMIAFPB_03371	1.13e-07	-	-	-	K	-	-	-	Acetyltransferase (GNAT) family
PAMIAFPB_03372	2.99e-172	-	-	GT4	M	ko:K03208	-	ko00000	Glycosyl transferase 4-like domain
PAMIAFPB_03373	1.99e-238	-	2.6.1.59	-	E	ko:K02805	-	ko00000,ko01000,ko01007	DegT/DnrJ/EryC1/StrS aminotransferase family
PAMIAFPB_03374	1.99e-260	gmd	4.2.1.47	-	M	ko:K01711	ko00051,ko00520,ko01100,map00051,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
PAMIAFPB_03375	1.57e-258	fcl	1.1.1.271	-	GM	ko:K02377	ko00051,ko00520,ko01100,map00051,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction
PAMIAFPB_03376	3.77e-176	-	-	-	M	ko:K01991	ko02026,map02026	ko00000,ko00001,ko02000	COG1596 Periplasmic protein involved in polysaccharide export
PAMIAFPB_03377	0.0	-	-	-	DM	-	-	-	Chain length determinant protein
PAMIAFPB_03378	1.7e-24	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03379	0.0	-	-	-	T	-	-	-	helix_turn_helix, arabinose operon control protein
PAMIAFPB_03381	1.37e-313	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03382	2.39e-88	-	-	-	L	-	-	-	COG NOG29624 non supervised orthologous group
PAMIAFPB_03383	1.99e-71	-	-	-	-	-	-	-	-
PAMIAFPB_03384	3.08e-125	-	-	-	V	-	-	-	N-acetylmuramoyl-L-alanine amidase
PAMIAFPB_03385	0.0	-	-	-	S	-	-	-	COG NOG22466 non supervised orthologous group
PAMIAFPB_03388	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
PAMIAFPB_03389	1.32e-305	-	-	-	-	-	-	-	-
PAMIAFPB_03390	1.07e-266	-	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	Trypsin
PAMIAFPB_03391	1.46e-168	-	-	-	S	ko:K02651	ko04112,map04112	ko00000,ko00001,ko02035,ko02044	COG NOG28004 non supervised orthologous group
PAMIAFPB_03392	1.64e-239	pabB	2.6.1.85	-	EH	ko:K01665	ko00790,map00790	ko00000,ko00001,ko01000	COG COG0147 Anthranilate para-aminobenzoate synthases component I
PAMIAFPB_03393	7.6e-145	-	4.1.3.38	-	EH	ko:K02619	ko00790,map00790	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03394	8.44e-168	-	-	-	S	-	-	-	TIGR02453 family
PAMIAFPB_03395	6.75e-101	tabA_2	-	-	G	-	-	-	YhcH YjgK YiaL family protein
PAMIAFPB_03396	0.0	glgB	2.4.1.18	CBM48,GH13	G	ko:K00700	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	1,4-alpha-glucan branching enzyme
PAMIAFPB_03397	3.68e-112	-	-	-	S	-	-	-	COG NOG29454 non supervised orthologous group
PAMIAFPB_03398	0.0	amyA2	-	-	G	-	-	-	Alpha amylase, catalytic domain
PAMIAFPB_03399	2.16e-197	-	-	-	S	ko:K07001	-	ko00000	esterase of the alpha-beta hydrolase superfamily
PAMIAFPB_03400	0.0	yccM_2	-	-	C	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_03401	3.4e-227	-	-	-	S	-	-	-	Tat pathway signal sequence domain protein
PAMIAFPB_03402	2.82e-111	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
PAMIAFPB_03403	7.01e-212	-	2.7.4.1	-	S	ko:K22468	ko00190,ko03018,map00190,map03018	ko00000,ko00001,ko01000,ko03019	Polyphosphate kinase 2 (PPK2)
PAMIAFPB_03404	4.02e-60	-	-	-	-	-	-	-	-
PAMIAFPB_03405	3.75e-119	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PAMIAFPB_03406	3.7e-175	-	-	-	J	-	-	-	Psort location Cytoplasmic, score
PAMIAFPB_03407	3.73e-31	-	-	-	-	-	-	-	-
PAMIAFPB_03408	7.23e-51	-	-	-	S	-	-	-	COG COG0724 RNA-binding proteins (RRM domain)
PAMIAFPB_03409	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	Glutamate--ammonia ligase, catalytic domain protein
PAMIAFPB_03410	2.16e-28	-	-	-	-	-	-	-	-
PAMIAFPB_03411	5.74e-165	-	-	-	S	-	-	-	Domain of unknown function (DUF4396)
PAMIAFPB_03412	3.54e-196	sucD	6.2.1.5	-	C	ko:K01902	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
PAMIAFPB_03413	8.46e-263	sucC	6.2.1.5	-	F	ko:K01903	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
PAMIAFPB_03414	1.93e-209	fabD	2.3.1.39	-	I	ko:K00645	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	malonyl CoA-acyl carrier protein transacylase
PAMIAFPB_03415	1.83e-194	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	COG0351 Hydroxymethylpyrimidine phosphomethylpyrimidine kinase
PAMIAFPB_03416	1.03e-171	-	-	-	F	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03417	6.83e-266	xylB_2	2.7.1.17	-	G	ko:K00854	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Carbohydrate kinase, FGGY family protein
PAMIAFPB_03418	6.41e-87	xylB_2	2.7.1.17	-	G	ko:K00854	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Carbohydrate kinase, FGGY family protein
PAMIAFPB_03419	0.0	xylA	5.3.1.5	-	G	ko:K01805	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_03420	0.0	-	-	-	P	ko:K08138	-	ko00000,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PAMIAFPB_03421	6.94e-73	-	-	-	L	-	-	-	Bacterial DNA-binding protein
PAMIAFPB_03422	0.0	-	-	-	S	-	-	-	Domain of unknonw function from B. Theta Gene description (DUF3874)
PAMIAFPB_03423	1.1e-71	-	-	-	K	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03424	5.49e-42	-	-	-	CO	-	-	-	Thioredoxin domain
PAMIAFPB_03425	6.01e-99	-	-	-	-	-	-	-	-
PAMIAFPB_03426	4.57e-153	-	-	-	CO	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03427	8.06e-74	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03428	0.0	-	3.6.3.16	-	D	ko:K01551	-	ko00000,ko01000,ko02000	Anion-transporting ATPase
PAMIAFPB_03429	1.76e-236	-	-	-	P	ko:K03325	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03430	0.0	ramA_2	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03432	1.84e-239	yhiM	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03433	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PAMIAFPB_03434	2.94e-80	yocK	-	-	T	-	-	-	RNA polymerase-binding protein DksA
PAMIAFPB_03435	5.26e-155	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PAMIAFPB_03436	7.16e-224	-	-	-	S	-	-	-	COG NOG25370 non supervised orthologous group
PAMIAFPB_03437	1.58e-79	-	-	-	-	-	-	-	-
PAMIAFPB_03438	4.13e-178	aviRb	-	-	J	ko:K03437	-	ko00000,ko03016	RNA methyltransferase, TrmH
PAMIAFPB_03439	3.12e-79	-	-	-	K	-	-	-	Penicillinase repressor
PAMIAFPB_03440	2.92e-313	-	-	-	U	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PAMIAFPB_03441	0.0	-	-	-	M	-	-	-	Outer membrane protein, OMP85 family
PAMIAFPB_03442	1.61e-125	-	-	-	S	-	-	-	COG NOG23374 non supervised orthologous group
PAMIAFPB_03443	4.97e-97	-	-	-	S	ko:K15977	-	ko00000	Psort location CytoplasmicMembrane, score 9.46
PAMIAFPB_03444	1.32e-96	nlpE	-	-	MP	-	-	-	lipoprotein NlpE involved in copper resistance
PAMIAFPB_03445	0.0	-	-	-	T	-	-	-	COG0642 Signal transduction histidine kinase
PAMIAFPB_03446	1.19e-54	-	-	-	-	-	-	-	-
PAMIAFPB_03447	1.91e-98	-	-	-	G	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03448	0.0	dtpD	-	-	E	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03449	2.72e-195	vicX	-	-	S	-	-	-	Metallo-beta-lactamase domain protein
PAMIAFPB_03452	0.0	uxaC	5.3.1.12	-	G	ko:K01812	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	glucuronate isomerase
PAMIAFPB_03453	5.19e-251	-	-	-	K	ko:K02529	-	ko00000,ko03000	Psort location Cytoplasmic, score
PAMIAFPB_03454	0.0	uxaB	1.1.1.17, 1.1.1.58	-	C	ko:K00009,ko:K00041	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the mannitol dehydrogenase family. UxaB subfamily
PAMIAFPB_03455	2.06e-125	-	-	-	T	-	-	-	FHA domain protein
PAMIAFPB_03456	3.78e-249	-	-	-	D	-	-	-	sporulation
PAMIAFPB_03457	4.64e-129	rfbC	5.1.3.13	-	G	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PAMIAFPB_03458	4.76e-316	ugd	1.1.1.22	-	C	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PAMIAFPB_03459	1.19e-188	-	-	-	S	-	-	-	COG NOG26711 non supervised orthologous group
PAMIAFPB_03460	1.47e-284	deaD	-	-	L	-	-	-	Belongs to the DEAD box helicase family
PAMIAFPB_03461	4.76e-288	serB	3.1.3.3	-	ET	ko:K01079	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko01009	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03462	2.09e-116	-	-	-	O	-	-	-	COG NOG28456 non supervised orthologous group
PAMIAFPB_03463	8.88e-248	lptG	-	-	S	ko:K11720	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Permease, YjgP YjgQ family
PAMIAFPB_03464	1.51e-281	tgt	2.4.2.29	-	F	ko:K00773	-	ko00000,ko01000,ko03016	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PAMIAFPB_03465	0.0	lon	3.4.21.53	-	O	ko:K01338	ko04112,map04112	ko00000,ko00001,ko01000,ko01002	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
PAMIAFPB_03466	3.83e-173	smtA	2.1.1.223	-	J	ko:K15460	-	ko00000,ko01000,ko03016	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
PAMIAFPB_03468	7.47e-172	-	-	-	-	-	-	-	-
PAMIAFPB_03470	1.61e-293	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PAMIAFPB_03472	7.15e-75	-	-	-	-	-	-	-	-
PAMIAFPB_03473	2.24e-88	-	-	-	-	-	-	-	-
PAMIAFPB_03474	5.34e-117	-	-	-	-	-	-	-	-
PAMIAFPB_03478	1.2e-127	-	-	-	K	-	-	-	transcriptional regulator, LuxR family
PAMIAFPB_03479	8.16e-60	-	-	-	-	-	-	-	-
PAMIAFPB_03480	1.63e-17	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_03483	3.31e-188	-	-	-	Q	-	-	-	Protein of unknown function (DUF1698)
PAMIAFPB_03484	8.1e-36	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03485	2.06e-297	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_03486	0.0	-	-	-	T	-	-	-	Sigma-54 interaction domain protein
PAMIAFPB_03487	0.0	-	-	-	MU	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_03488	1.3e-284	-	-	-	M	ko:K02005	-	ko00000	Efflux transporter, RND family, MFP subunit
PAMIAFPB_03489	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03490	2.91e-155	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	bacteriocin export ABC transporter, lactococcin 972 group
PAMIAFPB_03491	0.0	-	-	-	V	-	-	-	MacB-like periplasmic core domain
PAMIAFPB_03492	0.0	-	-	-	V	-	-	-	COG NOG11095 non supervised orthologous group
PAMIAFPB_03493	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03494	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PAMIAFPB_03495	0.0	-	-	-	M	-	-	-	F5/8 type C domain
PAMIAFPB_03496	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_03497	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_03498	1.62e-79	-	-	-	-	-	-	-	-
PAMIAFPB_03499	5.73e-75	-	-	-	S	-	-	-	Lipocalin-like
PAMIAFPB_03500	2.44e-287	bioF	2.3.1.29, 2.3.1.47	-	E	ko:K00639,ko:K00652	ko00260,ko00780,ko01100,map00260,map00780,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Beta-eliminating lyase
PAMIAFPB_03501	2.86e-240	-	-	-	I	-	-	-	lipid kinase, YegS Rv2252 BmrU family
PAMIAFPB_03502	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PAMIAFPB_03503	0.0	-	-	-	M	-	-	-	Sulfatase
PAMIAFPB_03504	1.44e-86	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
PAMIAFPB_03505	3.79e-220	-	3.5.1.53	-	S	ko:K12251	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko01000	hydrolase, carbon-nitrogen family
PAMIAFPB_03506	1.19e-125	aguA	3.5.3.12	-	E	ko:K10536	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03507	2.34e-141	aguA	3.5.3.12	-	E	ko:K10536	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03508	8.67e-124	-	-	-	S	-	-	-	protein containing a ferredoxin domain
PAMIAFPB_03509	1.91e-142	-	3.6.3.21	-	V	ko:K02028,ko:K02068	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
PAMIAFPB_03510	5.54e-173	-	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03511	4.03e-62	-	-	-	-	-	-	-	-
PAMIAFPB_03512	4.69e-94	-	-	-	S	-	-	-	Domain of unknown function (DUF4891)
PAMIAFPB_03513	2e-264	yqfO	-	-	C	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PAMIAFPB_03514	2.27e-155	-	-	-	S	ko:K07164	-	ko00000	Zinc ribbon domain protein
PAMIAFPB_03515	0.0	-	-	-	M	-	-	-	Efflux transporter, outer membrane factor lipoprotein, NodT family
PAMIAFPB_03516	2.05e-254	-	-	-	M	-	-	-	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMIAFPB_03517	0.0	bpeF	-	-	V	ko:K03296	-	ko00000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMIAFPB_03518	1.65e-106	-	-	-	V	-	-	-	COG NOG14438 non supervised orthologous group
PAMIAFPB_03519	7.21e-191	amn	3.2.2.4	-	F	ko:K01241	ko00230,map00230	ko00000,ko00001,ko01000	COG COG0775 Nucleoside phosphorylase
PAMIAFPB_03520	6.69e-239	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	COG1466 DNA polymerase III, delta subunit
PAMIAFPB_03522	5.77e-97	-	-	-	K	-	-	-	COG NOG19093 non supervised orthologous group
PAMIAFPB_03523	1.34e-186	pyrK	-	-	C	ko:K02823	ko00240,ko01100,map00240,map01100	ko00000,ko00001	Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
PAMIAFPB_03524	2.63e-211	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PAMIAFPB_03525	5.05e-161	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
PAMIAFPB_03526	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PAMIAFPB_03527	1.93e-210	dapA	4.3.3.7	-	EM	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PAMIAFPB_03531	0.0	-	-	-	M	ko:K07001	-	ko00000	esterase of the alpha-beta hydrolase superfamily
PAMIAFPB_03532	0.0	htpG	-	-	T	ko:K04079	ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418	ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_03533	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Belongs to the ClpA ClpB family
PAMIAFPB_03534	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PAMIAFPB_03535	4.95e-284	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
PAMIAFPB_03536	8.64e-76	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_03537	7.36e-265	uspA	-	-	T	-	-	-	COG0589 Universal stress protein UspA and related nucleotide-binding
PAMIAFPB_03538	6.54e-63	-	-	-	S	-	-	-	COG NOG19094 non supervised orthologous group
PAMIAFPB_03540	1.01e-186	batE	-	-	T	-	-	-	COG NOG22299 non supervised orthologous group
PAMIAFPB_03541	0.0	batD	-	-	S	-	-	-	COG NOG06393 non supervised orthologous group
PAMIAFPB_03542	5.86e-125	batC	-	-	S	-	-	-	Tetratricopeptide repeat protein
PAMIAFPB_03543	2.32e-236	batB	-	-	S	ko:K07114	-	ko00000,ko02000	Von Willebrand factor type A domain
PAMIAFPB_03544	2.48e-228	batA	-	-	S	ko:K07114	-	ko00000,ko02000	Von Willebrand factor type A domain
PAMIAFPB_03545	5.14e-249	-	-	-	O	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_03546	1.16e-207	-	-	-	S	-	-	-	protein (some members contain a von Willebrand factor type A (vWA) domain)
PAMIAFPB_03547	4.12e-229	moxR	-	-	S	ko:K03924	-	ko00000,ko01000	ATPase family associated with various cellular activities (AAA)
PAMIAFPB_03548	1.91e-261	-	-	-	L	-	-	-	Belongs to the bacterial histone-like protein family
PAMIAFPB_03549	2.56e-55	himA	-	-	L	ko:K03530,ko:K04764	-	ko00000,ko03032,ko03036,ko03400	COG0776 Bacterial nucleoid DNA-binding protein
PAMIAFPB_03550	0.0	rimO	2.8.4.4	-	J	ko:K14441	-	ko00000,ko01000,ko03009	Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12
PAMIAFPB_03551	5.58e-221	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PAMIAFPB_03552	1.54e-28	-	-	-	S	-	-	-	Domain of unknown function (DUF4295)
PAMIAFPB_03553	1e-35	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
PAMIAFPB_03554	2.83e-57	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
PAMIAFPB_03555	6.87e-277	cinA	3.5.1.42	-	S	ko:K03742,ko:K03743	ko00760,map00760	ko00000,ko00001,ko01000	Belongs to the CinA family
PAMIAFPB_03556	6.5e-246	tsaD	2.3.1.234	-	O	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PAMIAFPB_03557	0.0	-	-	-	S	-	-	-	Psort location OuterMembrane, score 9.49
PAMIAFPB_03558	5.76e-210	-	-	-	S	-	-	-	COG NOG14441 non supervised orthologous group
PAMIAFPB_03559	7.07e-97	-	-	-	S	-	-	-	COG NOG14442 non supervised orthologous group
PAMIAFPB_03561	5.55e-267	-	-	-	S	-	-	-	NPCBM-associated, NEW3 domain of alpha-galactosidase
PAMIAFPB_03562	1.28e-174	yxlF_1	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	Psort location Cytoplasmic, score 9.12
PAMIAFPB_03563	4.42e-217	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	COG COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
PAMIAFPB_03564	9.87e-269	qseC	-	-	T	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_03565	3.28e-157	-	-	-	K	-	-	-	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PAMIAFPB_03566	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro)
PAMIAFPB_03568	0.0	-	-	-	MU	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_03569	1.08e-223	-	-	-	M	ko:K01993	-	ko00000	Auxiliary transport protein, membrane fusion protein
PAMIAFPB_03570	1.59e-267	-	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PAMIAFPB_03571	4.78e-271	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03572	0.0	-	-	-	T	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_03573	1.03e-112	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
PAMIAFPB_03574	0.0	-	-	-	H	ko:K02014	-	ko00000,ko02000	COG COG4771 Outer membrane receptor for ferrienterochelin and colicins
PAMIAFPB_03575	1.67e-99	-	-	-	S	-	-	-	COG COG4771 Outer membrane receptor for ferrienterochelin and colicins
PAMIAFPB_03576	0.0	-	-	-	S	ko:K07079	-	ko00000	of the aldo keto reductase family
PAMIAFPB_03577	0.0	yccM	-	-	C	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_03578	0.0	-	-	-	P	-	-	-	Carboxypeptidase regulatory-like domain
PAMIAFPB_03579	7.35e-224	-	-	-	PT	-	-	-	Sigma factor regulatory protein, FecR PupR family
PAMIAFPB_03580	6.05e-121	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor, ECF subfamily K00960
PAMIAFPB_03581	4.3e-44	fjo13	-	-	S	-	-	-	COG NOG19122 non supervised orthologous group
PAMIAFPB_03582	0.0	-	-	-	EG	-	-	-	Protein of unknown function (DUF2723)
PAMIAFPB_03583	1.27e-250	-	-	-	S	-	-	-	Tetratricopeptide repeat
PAMIAFPB_03584	3.89e-151	-	3.1.3.10, 3.1.3.104	-	S	ko:K07025,ko:K20866,ko:K21063	ko00010,ko00740,ko01100,ko01110,ko01120,map00010,map00740,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	HAD hydrolase, family IA, variant 3
PAMIAFPB_03585	3.18e-193	-	-	-	S	-	-	-	Domain of unknown function (4846)
PAMIAFPB_03586	1.02e-191	vdlC	-	-	S	-	-	-	COG COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PAMIAFPB_03587	1.19e-172	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03588	4.96e-113	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
PAMIAFPB_03589	6.26e-170	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
PAMIAFPB_03590	1.96e-291	-	-	-	G	-	-	-	Major Facilitator Superfamily
PAMIAFPB_03591	4.83e-50	-	-	-	-	-	-	-	-
PAMIAFPB_03592	1.17e-118	-	-	-	K	-	-	-	Sigma-70, region 4
PAMIAFPB_03593	0.0	-	-	-	M	-	-	-	Belongs to the glycosyl hydrolase 28 family
PAMIAFPB_03594	0.0	-	-	-	G	-	-	-	pectate lyase K01728
PAMIAFPB_03595	0.0	-	-	-	T	-	-	-	cheY-homologous receiver domain
PAMIAFPB_03596	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
PAMIAFPB_03597	0.0	-	-	-	G	-	-	-	hydrolase, family 65, central catalytic
PAMIAFPB_03598	0.0	-	3.1.1.53	-	G	ko:K05970	-	ko00000,ko01000	COG NOG04984 non supervised orthologous group
PAMIAFPB_03599	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 2, sugar binding domain protein
PAMIAFPB_03600	0.0	-	-	-	CO	-	-	-	Thioredoxin-like
PAMIAFPB_03601	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	Psort location CytoplasmicMembrane, score
PAMIAFPB_03602	2.97e-303	arlS_1	-	-	T	-	-	-	histidine kinase DNA gyrase B
PAMIAFPB_03603	2.22e-161	-	-	-	K	ko:K07665	ko02020,map02020	ko00000,ko00001,ko00002,ko01504,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PAMIAFPB_03604	0.0	-	-	-	G	-	-	-	beta-galactosidase
PAMIAFPB_03605	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
PAMIAFPB_03606	2.6e-27	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_03607	1.53e-291	-	-	-	L	-	-	-	COG COG3385 FOG Transposase and inactivated derivatives
PAMIAFPB_03608	1.55e-283	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_03609	5.28e-200	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PAMIAFPB_03610	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 2 family
PAMIAFPB_03611	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase, family 20, catalytic domain
PAMIAFPB_03612	0.0	-	-	-	T	-	-	-	PAS domain S-box protein
PAMIAFPB_03613	5.44e-132	-	-	-	J	-	-	-	COG COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
PAMIAFPB_03614	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03615	0.0	-	-	-	G	-	-	-	Alpha-L-rhamnosidase
PAMIAFPB_03616	0.0	-	-	-	S	-	-	-	Parallel beta-helix repeats
PAMIAFPB_03617	0.0	-	-	-	S	ko:K09955	-	ko00000	protein conserved in bacteria
PAMIAFPB_03618	5.57e-191	-	-	-	S	-	-	-	COG4422 Bacteriophage protein gp37
PAMIAFPB_03619	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03620	1.07e-31	-	-	-	S	-	-	-	Psort location Extracellular, score
PAMIAFPB_03621	3.89e-78	-	-	-	S	-	-	-	Fimbrillin-like
PAMIAFPB_03622	5.08e-159	-	-	-	S	-	-	-	Fimbrillin-like
PAMIAFPB_03623	1.98e-120	-	-	-	S	-	-	-	Domain of unknown function (DUF5119)
PAMIAFPB_03624	1.21e-211	-	-	-	M	-	-	-	Protein of unknown function (DUF3575)
PAMIAFPB_03625	3.94e-39	-	-	-	-	-	-	-	-
PAMIAFPB_03626	8.92e-133	-	-	-	L	-	-	-	Phage integrase SAM-like domain
PAMIAFPB_03627	3.89e-79	-	-	-	-	-	-	-	-
PAMIAFPB_03628	9.74e-159	yfkO	-	-	C	-	-	-	Nitroreductase family
PAMIAFPB_03629	3.4e-125	-	-	-	S	-	-	-	Putative auto-transporter adhesin, head GIN domain
PAMIAFPB_03630	5.93e-192	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PAMIAFPB_03631	1.25e-221	-	1.3.5.2	-	F	ko:K00254	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
PAMIAFPB_03632	0.0	-	3.2.1.51	GH95	G	ko:K15923	ko00511,map00511	ko00000,ko00001,ko01000	COG NOG04001 non supervised orthologous group
PAMIAFPB_03633	1.34e-303	-	3.2.1.172	GH105	E	ko:K15532	-	ko00000,ko01000	unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
PAMIAFPB_03634	0.0	-	-	-	G	-	-	-	Putative collagen-binding domain of a collagenase
PAMIAFPB_03635	0.0	-	3.2.1.40	-	G	ko:K05989	-	ko00000,ko01000	Alpha-L-rhamnosidase N-terminal domain protein
PAMIAFPB_03636	2.74e-209	-	-	-	IQ	-	-	-	Oxidoreductase, short chain dehydrogenase reductase family protein
PAMIAFPB_03637	7.76e-187	-	-	-	M	ko:K07001	-	ko00000	Patatin-like phospholipase
PAMIAFPB_03638	0.0	-	-	-	Q	-	-	-	cephalosporin-C deacetylase activity
PAMIAFPB_03639	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 28 family
PAMIAFPB_03640	0.0	-	3.2.1.40	-	G	ko:K05989	-	ko00000,ko01000	Alpha-L-rhamnosidase N-terminal domain protein
PAMIAFPB_03641	0.0	hypBA2	-	-	G	-	-	-	BNR repeat-like domain
PAMIAFPB_03642	1.2e-210	hypBA2	-	-	G	-	-	-	BNR repeat-like domain
PAMIAFPB_03643	3.79e-218	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 43 family
PAMIAFPB_03644	2.26e-145	-	-	-	S	-	-	-	Protein of unknown function (DUF3826)
PAMIAFPB_03645	0.0	-	-	-	G	-	-	-	pectate lyase K01728
PAMIAFPB_03646	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_03647	1.12e-138	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_03648	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_03649	2.57e-88	-	-	-	S	-	-	-	Domain of unknown function
PAMIAFPB_03650	1.07e-209	-	-	-	G	-	-	-	Xylose isomerase-like TIM barrel
PAMIAFPB_03651	0.0	-	-	-	G	-	-	-	Alpha-1,2-mannosidase
PAMIAFPB_03652	2.03e-254	-	2.4.1.319, 2.4.1.320	-	G	ko:K18785	-	ko00000,ko01000	glycosylase
PAMIAFPB_03653	1.33e-309	ampG	-	-	EGP	ko:K08218	ko01501,map01501	ko00000,ko00001,ko00002,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03654	0.0	-	-	-	G	-	-	-	Domain of unknown function (DUF4838)
PAMIAFPB_03655	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF1735)
PAMIAFPB_03656	2.79e-289	-	-	-	S	-	-	-	Concanavalin A-like lectin/glucanases superfamily
PAMIAFPB_03657	2.06e-263	-	-	-	G	-	-	-	Glycosyl hydrolases family 18
PAMIAFPB_03658	0.0	-	-	-	S	-	-	-	non supervised orthologous group
PAMIAFPB_03659	1.53e-291	-	-	-	L	-	-	-	COG COG3385 FOG Transposase and inactivated derivatives
PAMIAFPB_03660	0.0	-	-	-	P	-	-	-	TonB dependent receptor
PAMIAFPB_03661	1.36e-291	-	-	-	S	-	-	-	Concanavalin A-like lectin/glucanases superfamily
PAMIAFPB_03662	2.91e-282	-	-	-	G	-	-	-	Putative glycoside hydrolase Family 18, chitinase_18
PAMIAFPB_03663	0.0	-	-	-	S	-	-	-	Susd and RagB outer membrane lipoprotein
PAMIAFPB_03664	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_03666	1.7e-299	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_03667	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_03668	0.0	-	-	-	S	-	-	-	non supervised orthologous group
PAMIAFPB_03669	9.5e-289	-	-	-	G	-	-	-	Glycosyl hydrolases family 18
PAMIAFPB_03670	2.16e-285	-	-	-	N	-	-	-	Concanavalin A-like lectin/glucanases superfamily
PAMIAFPB_03671	1.57e-140	-	-	-	S	-	-	-	Domain of unknown function
PAMIAFPB_03672	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain protein
PAMIAFPB_03673	3.6e-150	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PAMIAFPB_03674	1.48e-41	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PAMIAFPB_03675	1.65e-141	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor, Bacteroides expansion family 1
PAMIAFPB_03676	0.0	addA	-	-	L	-	-	-	Belongs to the helicase family. UvrD subfamily
PAMIAFPB_03677	2e-154	pflA_1	1.97.1.4	-	O	ko:K04069	-	ko00000,ko01000	4Fe-4S single cluster domain
PAMIAFPB_03678	1.69e-190	-	-	-	M	ko:K03832	-	ko00000,ko02000	Gram-negative bacterial TonB protein C-terminal
PAMIAFPB_03679	0.0	-	-	-	L	-	-	-	DNA-dependent ATPase I and helicase II
PAMIAFPB_03680	2.93e-259	pleD	2.7.13.3	-	T	ko:K11527	-	ko00000,ko01000,ko01001,ko02022	Response regulator receiver domain protein
PAMIAFPB_03681	2.22e-231	-	4.1.1.35	-	GM	ko:K08678	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko00002,ko01000	NAD dependent epimerase dehydratase family
PAMIAFPB_03682	7.15e-228	-	-	-	-	-	-	-	-
PAMIAFPB_03683	1.28e-226	-	-	-	-	-	-	-	-
PAMIAFPB_03684	7.17e-232	-	-	-	S	-	-	-	COG NOG32009 non supervised orthologous group
PAMIAFPB_03685	0.0	-	-	-	S	-	-	-	COG NOG34047 non supervised orthologous group
PAMIAFPB_03686	0.0	-	-	-	M	-	-	-	COG NOG23378 non supervised orthologous group
PAMIAFPB_03687	3.01e-142	-	-	-	M	-	-	-	Protein of unknown function (DUF3575)
PAMIAFPB_03688	0.0	-	-	-	-	-	-	-	-
PAMIAFPB_03690	1.9e-127	ibrB	-	-	K	-	-	-	Psort location Cytoplasmic, score
PAMIAFPB_03691	0.0	-	-	-	S	-	-	-	Phosphoadenosine phosphosulfate reductase family
PAMIAFPB_03692	4.38e-93	-	-	-	S	-	-	-	COG NOG32529 non supervised orthologous group
PAMIAFPB_03693	3.62e-118	-	-	-	S	-	-	-	Domain of unknown function (DUF4251)
PAMIAFPB_03694	8.67e-143	-	-	-	S	-	-	-	Domain of unknown function (DUF4136)
PAMIAFPB_03695	3.73e-156	-	-	-	M	-	-	-	Outer membrane protein beta-barrel domain
PAMIAFPB_03696	2.06e-236	-	-	-	T	-	-	-	Histidine kinase
PAMIAFPB_03697	4.15e-186	-	-	-	K	ko:K02477	-	ko00000,ko02022	LytTr DNA-binding domain protein
PAMIAFPB_03699	0.0	alaC	-	-	E	-	-	-	Aminotransferase, class I II
PAMIAFPB_03700	1.04e-141	-	-	-	K	ko:K07735	-	ko00000,ko03000	Belongs to the UPF0301 (AlgH) family
PAMIAFPB_03701	1.34e-131	speG	2.3.1.57	-	J	ko:K00657	ko00330,ko01100,ko04216,map00330,map01100,map04216	ko00000,ko00001,ko00002,ko01000	Acetyltransferase, gnat family
PAMIAFPB_03702	1.65e-97	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_03703	1.25e-142	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PAMIAFPB_03704	0.0	-	-	-	E	-	-	-	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PAMIAFPB_03705	8.49e-144	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
PAMIAFPB_03706	1.07e-131	-	-	-	S	-	-	-	COG NOG28221 non supervised orthologous group
PAMIAFPB_03708	8.95e-91	-	-	-	S	-	-	-	Protein of unknown function (DUF1573)
PAMIAFPB_03709	0.0	-	-	-	S	-	-	-	oligopeptide transporter, OPT family
PAMIAFPB_03710	0.0	-	-	-	I	-	-	-	pectin acetylesterase
PAMIAFPB_03711	5.21e-226	-	-	-	M	-	-	-	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
PAMIAFPB_03712	1.45e-161	lipB	2.3.1.181	-	H	ko:K03801	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate
PAMIAFPB_03713	2.38e-199	-	-	-	K	-	-	-	methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC XylS family)
PAMIAFPB_03714	0.0	copA	3.6.3.4, 3.6.3.54	-	P	ko:K01533,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03715	1.4e-55	-	-	-	P	ko:K08364	-	ko00000,ko02000	Heavy metal-associated domain protein
PAMIAFPB_03716	0.0	-	-	-	P	-	-	-	COG COG4771 Outer membrane receptor for ferrienterochelin and colicins
PAMIAFPB_03717	8.16e-36	-	-	-	-	-	-	-	-
PAMIAFPB_03718	2.71e-206	-	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PAMIAFPB_03719	3.63e-95	-	-	-	J	-	-	-	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
PAMIAFPB_03720	8.72e-48	-	-	-	S	-	-	-	COG NOG14112 non supervised orthologous group
PAMIAFPB_03721	1.47e-207	-	-	-	S	-	-	-	Protein of unknown function (DUF3298)
PAMIAFPB_03722	5.96e-146	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
PAMIAFPB_03723	6.58e-159	-	-	-	P	-	-	-	Psort location Cytoplasmic, score
PAMIAFPB_03724	0.0	gcvP	1.4.4.2	-	E	ko:K00281,ko:K00283	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002,ko01000	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PAMIAFPB_03725	2.28e-137	-	-	-	C	-	-	-	Nitroreductase family
PAMIAFPB_03726	3.42e-259	hpaIIR	3.1.21.4	-	L	ko:K01155	-	ko00000,ko01000,ko02048	COG NOG26934 non supervised orthologous group
PAMIAFPB_03727	3.06e-137	yigZ	-	-	S	-	-	-	YigZ family
PAMIAFPB_03728	8.2e-308	-	-	-	S	-	-	-	Conserved protein
PAMIAFPB_03729	4.92e-213	serA	1.1.1.399, 1.1.1.95	-	C	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAMIAFPB_03730	5.26e-260	serC	2.6.1.52	-	E	ko:K00831	ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PAMIAFPB_03731	4.68e-315	dbpA	3.6.4.13	-	L	ko:K05591	-	ko00000,ko01000,ko03009	ATP-independent RNA helicase DbpA
PAMIAFPB_03732	1.05e-310	nqrF	1.6.5.8	-	C	ko:K00351	-	ko00000,ko01000	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway
PAMIAFPB_03733	3.08e-124	nqrE	1.6.5.8	-	C	ko:K00350	-	ko00000,ko01000	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PAMIAFPB_03735	2.3e-142	nqrD	1.6.5.8	-	C	ko:K00349	-	ko00000,ko01000	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PAMIAFPB_03736	1.38e-158	nqrC	1.6.5.8	-	C	ko:K00348	-	ko00000,ko01000	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PAMIAFPB_03737	6.14e-279	nqrB	1.6.5.8	-	C	ko:K00347	-	ko00000,ko01000	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PAMIAFPB_03738	0.0	nqrA	1.6.5.8	-	C	ko:K00346	-	ko00000,ko01000	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PAMIAFPB_03739	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
PAMIAFPB_03740	9.91e-306	-	-	-	M	-	-	-	COG NOG26016 non supervised orthologous group
PAMIAFPB_03741	1.21e-164	-	-	-	MU	-	-	-	COG NOG27134 non supervised orthologous group
PAMIAFPB_03742	0.0	-	-	-	M	-	-	-	COG NOG36677 non supervised orthologous group
PAMIAFPB_03743	0.0	-	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03744	1.87e-218	-	-	-	S	ko:K07011	-	ko00000	Glycosyltransferase, group 2 family protein
PAMIAFPB_03745	6.66e-281	-	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_03746	3.91e-113	-	3.5.1.28	-	V	ko:K01447	-	ko00000,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03747	2.47e-13	-	-	-	-	-	-	-	-
PAMIAFPB_03748	4.22e-102	-	-	-	L	-	-	-	COG NOG31453 non supervised orthologous group
PAMIAFPB_03750	4.23e-54	-	-	-	S	-	-	-	Domain of unknown function (DUF4248)
PAMIAFPB_03751	1.12e-103	-	-	-	E	-	-	-	Glyoxalase-like domain
PAMIAFPB_03752	0.0	-	3.6.4.12	-	L	ko:K17680	-	ko00000,ko01000,ko03029	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03753	4.07e-205	-	-	-	S	-	-	-	Domain of unknown function (DUF4373)
PAMIAFPB_03754	1.76e-63	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PAMIAFPB_03755	1.59e-59	-	-	-	M	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03756	2.58e-185	-	-	-	M	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03757	6.91e-210	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PAMIAFPB_03758	0.0	-	-	-	S	ko:K03328	-	ko00000	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PAMIAFPB_03759	5.04e-280	-	-	-	M	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03760	1.1e-228	-	-	-	M	-	-	-	Pfam:DUF1792
PAMIAFPB_03761	2.52e-284	-	-	-	M	-	-	-	Glycosyltransferase, group 1 family protein
PAMIAFPB_03762	9.22e-211	-	-	-	M	-	-	-	Glycosyltransferase, group 2 family protein
PAMIAFPB_03763	0.0	-	-	-	S	-	-	-	Putative polysaccharide deacetylase
PAMIAFPB_03764	1.02e-278	-	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_03765	0.0	-	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_03766	7.02e-268	-	-	-	S	-	-	-	Endonuclease Exonuclease phosphatase family protein
PAMIAFPB_03767	0.0	-	-	-	P	-	-	-	Carboxypeptidase regulatory-like domain
PAMIAFPB_03768	0.0	-	-	-	S	ko:K15738	-	ko00000,ko02000	ATP-binding cassette protein, ChvD family
PAMIAFPB_03770	6.53e-35	-	-	-	S	-	-	-	PFAM beta-lactamase domain protein
PAMIAFPB_03771	1.58e-210	-	-	-	S	ko:K08217	-	br01600,ko00000,ko01504,ko02000	Transmembrane secretion effector
PAMIAFPB_03772	3.93e-242	-	-	-	K	ko:K13652	-	ko00000,ko03000	Bacterial transcription activator, effector binding domain
PAMIAFPB_03773	1.14e-105	-	-	-	KT	-	-	-	Bacterial transcription activator, effector binding domain
PAMIAFPB_03774	4.45e-252	-	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PAMIAFPB_03775	1.88e-176	-	-	-	-	-	-	-	-
PAMIAFPB_03776	0.0	xynB	-	-	I	-	-	-	pectin acetylesterase
PAMIAFPB_03777	0.0	-	-	-	V	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03778	9.48e-131	-	-	-	M	-	-	-	COG2885 Outer membrane protein and related peptidoglycan-associated
PAMIAFPB_03779	3.27e-159	mtgA	2.4.1.129	GT51	M	ko:K03814	ko00550,map00550	ko00000,ko00001,ko01000,ko01003,ko01011	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
PAMIAFPB_03780	0.0	-	6.4.1.1	-	C	ko:K01960	ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	COG5016 Pyruvate oxaloacetate carboxyltransferase
PAMIAFPB_03781	1.17e-117	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PAMIAFPB_03782	7.6e-121	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
PAMIAFPB_03783	2.25e-216	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Peptidase family M48
PAMIAFPB_03784	3.22e-109	-	-	-	S	-	-	-	COG NOG30135 non supervised orthologous group
PAMIAFPB_03785	5.72e-150	yadS	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03786	2.12e-253	wecB	5.1.3.14	-	M	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PAMIAFPB_03788	0.0	-	-	-	M	-	-	-	COG NOG06397 non supervised orthologous group
PAMIAFPB_03789	6.2e-302	rarA	-	-	L	ko:K07478	-	ko00000	COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase
PAMIAFPB_03790	4.48e-231	hprA	1.1.1.29	-	C	ko:K00018	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAMIAFPB_03791	3.37e-271	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	COG1294 Cytochrome bd-type quinol oxidase subunit 2
PAMIAFPB_03792	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	COG1271 Cytochrome bd-type quinol oxidase, subunit 1
PAMIAFPB_03793	8.29e-51	-	-	-	S	-	-	-	COG NOG17489 non supervised orthologous group
PAMIAFPB_03794	4.75e-307	-	-	-	MU	ko:K12340	ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133	ko00000,ko00001,ko00002,ko01504,ko02000,ko02044	type I secretion outer membrane protein, TolC family
PAMIAFPB_03795	1.37e-271	-	-	-	M	ko:K02005	-	ko00000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMIAFPB_03796	3.95e-169	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAMIAFPB_03797	3.41e-36	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	Efflux ABC transporter, permease protein
PAMIAFPB_03798	1.48e-223	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	Efflux ABC transporter, permease protein
PAMIAFPB_03799	2.06e-258	cheA	-	-	T	-	-	-	two-component sensor histidine kinase
PAMIAFPB_03800	5.22e-162	-	-	-	K	-	-	-	COG3279 Response regulator of the LytR AlgR family
PAMIAFPB_03802	6.58e-294	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_03804	1.21e-99	-	-	-	S	-	-	-	Domain of unknown function (DUF5053)
PAMIAFPB_03805	1.17e-120	-	-	-	S	-	-	-	repeat protein
PAMIAFPB_03806	1.9e-113	-	-	-	-	-	-	-	-
PAMIAFPB_03807	1.54e-141	-	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	COG NOG32858 non supervised orthologous group
PAMIAFPB_03808	1.57e-119	-	-	-	-	-	-	-	-
PAMIAFPB_03809	2.45e-58	-	-	-	-	-	-	-	-
PAMIAFPB_03810	4.89e-63	-	-	-	-	-	-	-	-
PAMIAFPB_03811	0.0	-	-	-	L	-	-	-	COG COG3344 Retron-type reverse transcriptase
PAMIAFPB_03813	5.98e-182	-	-	-	S	-	-	-	Protein of unknown function (DUF1566)
PAMIAFPB_03814	2.07e-192	-	-	-	-	-	-	-	-
PAMIAFPB_03815	0.0	-	-	-	-	-	-	-	-
PAMIAFPB_03816	0.0	-	-	-	-	-	-	-	-
PAMIAFPB_03817	1.93e-270	-	-	-	-	-	-	-	-
PAMIAFPB_03826	4.9e-30	-	-	-	-	-	-	-	-
PAMIAFPB_03827	2.54e-60	-	-	-	S	-	-	-	Domain of unknown function (DUF3846)
PAMIAFPB_03828	1.1e-130	-	-	-	S	ko:K06909	-	ko00000	Phage terminase large subunit
PAMIAFPB_03829	5.41e-123	-	-	-	L	ko:K07474	-	ko00000	Terminase small subunit
PAMIAFPB_03830	1.96e-137	-	-	-	S	-	-	-	competence protein
PAMIAFPB_03831	8.61e-157	-	5.1.3.6	-	GM	ko:K08679	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Polysaccharide biosynthesis protein
PAMIAFPB_03832	4.46e-277	-	-	-	S	-	-	-	Bacteriophage abortive infection AbiH
PAMIAFPB_03833	1.98e-138	-	-	-	S	-	-	-	ASCH domain
PAMIAFPB_03836	2.34e-241	-	-	-	L	-	-	-	DNA restriction-modification system
PAMIAFPB_03837	1.08e-270	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
PAMIAFPB_03838	7.27e-145	-	-	-	-	-	-	-	-
PAMIAFPB_03839	1.08e-118	-	-	-	-	-	-	-	-
PAMIAFPB_03840	6.64e-56	-	-	-	-	-	-	-	-
PAMIAFPB_03842	6.12e-45	-	-	-	-	-	-	-	-
PAMIAFPB_03844	5.72e-181	-	-	-	EH	-	-	-	Phosphoadenosine phosphosulfate reductase family
PAMIAFPB_03845	6.66e-113	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03846	8.78e-157	-	-	-	S	-	-	-	Domain of unknown function (DUF3560)
PAMIAFPB_03847	3.37e-140	-	-	-	L	-	-	-	atpase related to the helicase subunit of the holliday junction resolvase
PAMIAFPB_03848	4.17e-186	-	-	-	-	-	-	-	-
PAMIAFPB_03849	4.69e-158	-	-	-	K	-	-	-	ParB-like nuclease domain
PAMIAFPB_03850	1e-62	-	-	-	-	-	-	-	-
PAMIAFPB_03851	3.81e-245	-	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	ParB-like nuclease domain
PAMIAFPB_03852	3.41e-42	-	-	-	-	-	-	-	-
PAMIAFPB_03853	1.4e-95	-	-	-	-	-	-	-	-
PAMIAFPB_03854	1.32e-183	-	-	-	L	-	-	-	DnaD domain protein
PAMIAFPB_03855	1.02e-107	-	-	-	V	-	-	-	Bacteriophage Lambda NinG protein
PAMIAFPB_03856	9.11e-283	-	-	-	L	ko:K19789	-	ko00000,ko03400	helicase superfamily c-terminal domain
PAMIAFPB_03857	1.35e-64	-	-	-	S	-	-	-	HNH nucleases
PAMIAFPB_03858	2.88e-145	-	-	-	-	-	-	-	-
PAMIAFPB_03859	2.66e-100	-	-	-	-	-	-	-	-
PAMIAFPB_03860	1.65e-106	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Single-stranded DNA-binding protein
PAMIAFPB_03861	2.47e-221	-	-	-	L	-	-	-	YqaJ viral recombinase family
PAMIAFPB_03862	9.83e-190	-	-	-	S	-	-	-	double-strand break repair protein
PAMIAFPB_03863	1.07e-35	-	-	-	-	-	-	-	-
PAMIAFPB_03864	3.02e-56	-	-	-	-	-	-	-	-
PAMIAFPB_03865	2.48e-40	-	-	-	-	-	-	-	-
PAMIAFPB_03866	5.23e-45	-	-	-	-	-	-	-	-
PAMIAFPB_03868	4.12e-57	-	-	-	-	-	-	-	-
PAMIAFPB_03870	1.1e-98	-	-	-	-	-	-	-	-
PAMIAFPB_03871	5.16e-72	-	-	-	-	-	-	-	-
PAMIAFPB_03872	1.76e-169	yoqW	-	-	E	-	-	-	SOS response associated peptidase (SRAP)
PAMIAFPB_03873	9.82e-234	yfeX	-	-	P	ko:K07223	-	ko00000	Dyp-type peroxidase family
PAMIAFPB_03874	2.64e-165	pgl	3.1.1.31	-	G	ko:K01057	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	COG0363 6-phosphogluconolactonase Glucosamine-6-phosphate isomerase deaminase
PAMIAFPB_03875	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PAMIAFPB_03876	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PAMIAFPB_03877	3.37e-255	sstT	-	-	U	-	-	-	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PAMIAFPB_03878	1.2e-261	gmd	4.2.1.47	-	M	ko:K01711	ko00051,ko00520,ko01100,map00051,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
PAMIAFPB_03879	1.41e-269	fcl	1.1.1.271	-	GM	ko:K02377	ko00051,ko00520,ko01100,map00051,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction
PAMIAFPB_03880	0.0	-	6.2.1.3	-	I	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	Psort location CytoplasmicMembrane, score
PAMIAFPB_03881	3.03e-154	-	-	-	S	-	-	-	Peptidase C14 caspase catalytic subunit p20
PAMIAFPB_03882	0.0	fbp	3.1.3.11	-	G	ko:K04041	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3
PAMIAFPB_03883	0.0	-	-	-	P	ko:K07085	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03884	7.04e-107	-	-	-	-	-	-	-	-
PAMIAFPB_03887	5.34e-42	-	-	-	-	-	-	-	-
PAMIAFPB_03888	2.5e-175	-	-	-	S	-	-	-	Domain of Unknown Function with PDB structure
PAMIAFPB_03889	4.57e-135	-	-	-	T	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03890	4.58e-215	-	-	-	K	-	-	-	methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC XylS family)
PAMIAFPB_03891	0.0	cpdB	3.1.3.6, 3.1.4.16	-	F	ko:K01119	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PAMIAFPB_03892	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_03893	0.0	yhgF	-	-	K	ko:K06959	-	ko00000	Tex-like protein N-terminal domain
PAMIAFPB_03894	7.8e-206	-	-	-	S	ko:K07052	-	ko00000	CAAX amino terminal protease family protein
PAMIAFPB_03895	2.29e-251	-	-	-	S	-	-	-	COG NOG26673 non supervised orthologous group
PAMIAFPB_03897	3.36e-54	-	-	-	M	-	-	-	COG COG3209 Rhs family protein
PAMIAFPB_03898	1.35e-53	-	-	-	-	-	-	-	-
PAMIAFPB_03899	0.0	-	-	-	M	-	-	-	COG COG3209 Rhs family protein
PAMIAFPB_03900	0.0	-	-	-	M	-	-	-	COG3209 Rhs family protein
PAMIAFPB_03901	9.16e-09	-	-	-	-	-	-	-	-
PAMIAFPB_03902	1.43e-106	-	-	-	V	-	-	-	N-acetylmuramoyl-L-alanine amidase
PAMIAFPB_03903	1.97e-105	-	-	-	L	-	-	-	Bacterial DNA-binding protein
PAMIAFPB_03904	8.84e-43	-	-	-	S	-	-	-	Domain of unknown function (DUF4248)
PAMIAFPB_03905	0.0	-	-	-	S	-	-	-	P-loop ATPase and inactivated derivatives
PAMIAFPB_03906	0.0	-	-	-	S	-	-	-	COG COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PAMIAFPB_03907	2.83e-124	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PAMIAFPB_03908	2.61e-228	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PAMIAFPB_03909	0.0	-	-	-	M	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_03910	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_03911	1.03e-294	-	-	-	DM	-	-	-	Chain length determinant protein
PAMIAFPB_03912	1.04e-184	-	-	-	DM	-	-	-	Chain length determinant protein
PAMIAFPB_03913	2.17e-159	-	-	-	M	ko:K01991	ko02026,map02026	ko00000,ko00001,ko02000	COG1596 Periplasmic protein involved in polysaccharide export
PAMIAFPB_03914	4.04e-303	-	2.7.8.6	-	M	ko:K00996,ko:K03606	ko05111,map05111	ko00000,ko00001,ko01000,ko01005	Psort location CytoplasmicMembrane, score
PAMIAFPB_03915	1.46e-178	-	-	-	M	-	-	-	Glycosyltransferase, group 1 family
PAMIAFPB_03916	1.94e-239	-	-	-	C	-	-	-	Iron-sulfur cluster-binding domain
PAMIAFPB_03917	4.65e-170	-	-	-	M	-	-	-	Glycosyl transferase 4-like domain
PAMIAFPB_03918	2.23e-167	-	-	-	S	-	-	-	Polysaccharide pyruvyl transferase
PAMIAFPB_03919	3.14e-168	-	-	-	C	-	-	-	Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term
PAMIAFPB_03920	6.44e-91	-	-	-	M	-	-	-	Glycosyltransferase Family 4
PAMIAFPB_03921	2.18e-91	-	-	-	M	-	-	-	Glycosyltransferase, group 1 family protein
PAMIAFPB_03922	1.68e-49	-	-	-	M	-	-	-	Glycosyltransferase, group 2 family protein
PAMIAFPB_03923	7.51e-92	-	-	-	M	-	-	-	Glycosyl transferases group 1
PAMIAFPB_03925	2.33e-35	-	-	-	S	-	-	-	Polysaccharide pyruvyl transferase
PAMIAFPB_03926	5.54e-14	-	-	-	C	-	-	-	Polysaccharide pyruvyl transferase
PAMIAFPB_03927	5.25e-116	-	-	-	C	-	-	-	Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus
PAMIAFPB_03928	1.67e-149	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03929	1.28e-136	-	-	-	K	-	-	-	Transcription termination antitermination factor NusG
PAMIAFPB_03930	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
PAMIAFPB_03931	0.0	nagZ3	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain
PAMIAFPB_03932	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain protein
PAMIAFPB_03933	0.0	-	3.2.1.25	-	G	ko:K01192	ko00511,ko04142,map00511,map04142	ko00000,ko00001,ko01000	Glycosyl hydrolase family 2, sugar binding domain protein
PAMIAFPB_03934	0.0	estS	3.1.1.53	-	E	ko:K05970	-	ko00000,ko01000	Carbohydrate esterase, sialic acid-specific acetylesterase
PAMIAFPB_03935	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 20, catalytic domain
PAMIAFPB_03936	0.0	nanH	3.2.1.18	GH33	G	ko:K01186	ko00511,ko00600,ko04142,map00511,map00600,map04142	ko00000,ko00001,ko01000,ko02042	BNR Asp-box repeat protein
PAMIAFPB_03937	4.47e-93	araE	-	-	P	ko:K08138,ko:K08139	ko04113,map04113	ko00000,ko00001,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PAMIAFPB_03938	1.05e-298	ce	5.1.3.8	-	G	ko:K01787	ko00520,map00520	ko00000,ko00001,ko01000	COG COG2942 N-acyl-D-glucosamine 2-epimerase
PAMIAFPB_03939	2.07e-260	-	-	-	S	-	-	-	Domain of unknown function (DUF5109)
PAMIAFPB_03940	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_03941	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_03942	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF5018)
PAMIAFPB_03943	2.33e-312	-	-	-	S	-	-	-	Domain of unknown function
PAMIAFPB_03944	4.23e-305	-	3.1.1.53	-	G	ko:K05970	-	ko00000,ko01000	COG NOG04984 non supervised orthologous group
PAMIAFPB_03945	0.0	-	-	-	S	-	-	-	C terminal of Calcineurin-like phosphoesterase
PAMIAFPB_03946	1.45e-300	-	3.1.1.53	-	G	ko:K05970	-	ko00000,ko01000	COG NOG04984 non supervised orthologous group
PAMIAFPB_03947	9.98e-306	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03948	2.84e-228	-	-	-	G	-	-	-	Phosphodiester glycosidase
PAMIAFPB_03949	1.4e-227	-	-	-	E	-	-	-	COG NOG09493 non supervised orthologous group
PAMIAFPB_03952	8.14e-103	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
PAMIAFPB_03953	6.32e-86	araE	-	-	P	ko:K08138,ko:K08139	ko04113,map04113	ko00000,ko00001,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PAMIAFPB_03954	8.64e-110	ce	5.1.3.8	-	G	ko:K01787	ko00520,map00520	ko00000,ko00001,ko01000	COG COG2942 N-acyl-D-glucosamine 2-epimerase
PAMIAFPB_03955	1.04e-157	ce	5.1.3.8	-	G	ko:K01787	ko00520,map00520	ko00000,ko00001,ko01000	COG COG2942 N-acyl-D-glucosamine 2-epimerase
PAMIAFPB_03956	9.56e-63	ce	5.1.3.8	-	G	ko:K01787	ko00520,map00520	ko00000,ko00001,ko01000	COG COG2942 N-acyl-D-glucosamine 2-epimerase
PAMIAFPB_03957	2.09e-199	ce	5.1.3.8	-	G	ko:K01787	ko00520,map00520	ko00000,ko00001,ko01000	COG COG2942 N-acyl-D-glucosamine 2-epimerase
PAMIAFPB_03958	0.0	araE	-	-	P	ko:K08138,ko:K08139	ko04113,map04113	ko00000,ko00001,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PAMIAFPB_03959	1.89e-279	-	-	-	S	-	-	-	Domain of unknown function (DUF5109)
PAMIAFPB_03960	0.0	-	-	-	O	-	-	-	FAD dependent oxidoreductase
PAMIAFPB_03961	2.46e-291	nagC	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_03963	1.22e-215	nucA_1	-	-	F	ko:K01173	ko04210,map04210	ko00000,ko00001,ko03029	Psort location Extracellular, score
PAMIAFPB_03964	9.02e-256	mltG	-	-	S	ko:K07082	-	ko00000	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PAMIAFPB_03965	0.0	iorA	1.2.7.8	-	C	ko:K00179	-	br01601,ko00000,ko01000	Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates
PAMIAFPB_03966	8.86e-133	iorB	1.2.7.8	-	C	ko:K00180	-	br01601,ko00000,ko01000	COG1014 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin
PAMIAFPB_03967	1.9e-314	paaK	6.2.1.30	-	H	ko:K01912	ko00360,ko01120,ko05111,map00360,map01120,map05111	ko00000,ko00001,ko01000	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
PAMIAFPB_03968	4.41e-131	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PAMIAFPB_03969	2.96e-198	-	-	-	C	-	-	-	4Fe-4S binding domain protein
PAMIAFPB_03970	6.17e-75	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PAMIAFPB_03972	1.84e-133	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PAMIAFPB_03973	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PAMIAFPB_03974	1.17e-200	-	-	-	S	-	-	-	COG COG0457 FOG TPR repeat
PAMIAFPB_03975	3.26e-130	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PAMIAFPB_03976	1.29e-91	ruvX	-	-	L	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PAMIAFPB_03977	2.22e-272	-	-	-	M	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_03978	6.89e-236	-	-	-	S	-	-	-	COG NOG26583 non supervised orthologous group
PAMIAFPB_03979	9e-279	-	-	-	S	-	-	-	Sulfotransferase family
PAMIAFPB_03980	0.0	cysN	2.7.1.25, 2.7.7.4	-	H	ko:K00955,ko:K00956	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily
PAMIAFPB_03981	5.19e-222	cysD	2.7.7.4	-	H	ko:K00957	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	ko00000,ko00001,ko00002,ko01000	COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase) FAD synthetase
PAMIAFPB_03982	6.96e-138	cysC	2.7.1.25	-	F	ko:K00860	ko00230,ko00920,ko01100,ko01120,map00230,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of activated sulfate
PAMIAFPB_03983	0.0	-	-	-	P	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_03984	6.65e-192	cysQ	3.1.3.7	-	P	ko:K01082	ko00920,ko01100,ko01120,ko01130,map00920,map01100,map01120,map01130	ko00000,ko00001,ko01000,ko03016	3'(2'),5'-bisphosphate nucleotidase
PAMIAFPB_03985	2.12e-89	-	-	-	D	-	-	-	Sporulation and cell division repeat protein
PAMIAFPB_03986	2.39e-179	ydfG	-	-	S	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
PAMIAFPB_03987	8.36e-38	-	-	-	S	-	-	-	COG NOG35214 non supervised orthologous group
PAMIAFPB_03988	1.4e-52	-	-	-	S	-	-	-	COG NOG30994 non supervised orthologous group
PAMIAFPB_03989	2.27e-49	-	-	-	S	-	-	-	COG NOG35393 non supervised orthologous group
PAMIAFPB_03990	2.2e-83	-	-	-	-	-	-	-	-
PAMIAFPB_03991	0.0	-	-	-	L	-	-	-	Protein of unknown function (DUF3987)
PAMIAFPB_03992	1.79e-111	-	-	-	L	-	-	-	regulation of translation
PAMIAFPB_03994	6.01e-99	-	3.5.1.28	-	V	ko:K01447	-	ko00000,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_03995	2.06e-46	-	-	-	S	-	-	-	Domain of unknown function (DUF4248)
PAMIAFPB_03996	0.0	-	-	-	DM	-	-	-	Chain length determinant protein
PAMIAFPB_03997	5.39e-172	-	-	-	M	ko:K01991	ko02026,map02026	ko00000,ko00001,ko02000	COG1596 Periplasmic protein involved in polysaccharide export
PAMIAFPB_03998	4.95e-87	-	-	-	S	-	-	-	EcsC protein family
PAMIAFPB_03999	7.43e-255	fcl	1.1.1.271	-	GM	ko:K02377	ko00051,ko00520,ko01100,map00051,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction
PAMIAFPB_04000	1.99e-260	gmd	4.2.1.47	-	M	ko:K01711	ko00051,ko00520,ko01100,map00051,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
PAMIAFPB_04001	3.83e-236	-	2.6.1.59	-	E	ko:K02805	-	ko00000,ko01000,ko01007	DegT/DnrJ/EryC1/StrS aminotransferase family
PAMIAFPB_04002	1.23e-181	-	-	GT4	M	ko:K03208	-	ko00000	Glycosyl transferase 4-like domain
PAMIAFPB_04003	3.18e-22	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
PAMIAFPB_04004	1.71e-81	-	-	-	M	ko:K13012,ko:K19428	-	ko00000,ko01000,ko01005	COG2148 Sugar transferases involved in lipopolysaccharide synthesis
PAMIAFPB_04005	2.28e-150	-	-	-	EF	-	-	-	ATP-grasp domain
PAMIAFPB_04006	1.76e-88	exoL	-	GT2	M	ko:K16557,ko:K16558	-	ko00000,ko01000,ko01003	transferase activity, transferring glycosyl groups
PAMIAFPB_04007	1.83e-235	-	5.1.3.14	-	M	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	UDP-N-acetylglucosamine 2-epimerase
PAMIAFPB_04008	5.42e-134	-	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PAMIAFPB_04009	1.88e-202	-	5.1.3.2	-	M	ko:K17716	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Polysaccharide biosynthesis protein C-terminal
PAMIAFPB_04010	3.66e-85	-	-	-	S	-	-	-	Glycosyl transferase family 2
PAMIAFPB_04012	7.53e-82	-	-	-	M	-	-	-	Glycosyltransferase, group 2 family protein
PAMIAFPB_04015	4.66e-132	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_04016	1.32e-33	-	-	-	L	-	-	-	Cupin 2, conserved barrel domain protein
PAMIAFPB_04017	7.92e-231	-	5.1.3.6	-	M	ko:K08679	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	NAD dependent epimerase dehydratase family
PAMIAFPB_04018	3.13e-310	ugd	1.1.1.22	-	C	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PAMIAFPB_04019	0.0	wbpM	-	-	GM	-	-	-	Polysaccharide biosynthesis protein
PAMIAFPB_04020	1.53e-57	-	-	-	S	-	-	-	UpxZ family of transcription anti-terminator antagonists
PAMIAFPB_04021	1.17e-136	-	-	-	K	-	-	-	KOW (Kyprides, Ouzounis, Woese) motif.
PAMIAFPB_04022	1.45e-182	-	-	-	L	-	-	-	COG NOG21178 non supervised orthologous group
PAMIAFPB_04023	8.36e-27	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04024	1.84e-237	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04025	9.3e-275	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Converts alpha-aldose to the beta-anomer
PAMIAFPB_04026	3.49e-306	gluP	-	-	G	ko:K02429	-	ko00000,ko02000	Transporter, major facilitator family protein
PAMIAFPB_04027	1.52e-285	galK	2.7.1.6	-	H	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GHMP kinase family. GalK subfamily
PAMIAFPB_04028	9.84e-246	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 43 family
PAMIAFPB_04029	0.0	-	3.2.1.55	GH51	G	ko:K01209	ko00520,map00520	ko00000,ko00001,ko01000	Carbohydrate binding domain protein
PAMIAFPB_04030	0.0	-	3.2.1.99	GH43	G	ko:K06113	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 43 family
PAMIAFPB_04031	0.0	-	-	-	T	-	-	-	adenylate cyclase carring two-component hybrid sensor and regulator domains
PAMIAFPB_04032	0.0	-	-	-	-	-	-	-	-
PAMIAFPB_04033	0.0	-	-	-	H	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_04034	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	Pfam:SusD
PAMIAFPB_04035	0.0	-	-	-	P	-	-	-	TonB-dependent Receptor Plug Domain
PAMIAFPB_04036	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	Pfam:SusD
PAMIAFPB_04037	0.0	-	3.2.1.99	GH43	G	ko:K06113	-	ko00000,ko01000	Glycosyl hydrolases family 43
PAMIAFPB_04038	2.82e-283	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Converts alpha-aldose to the beta-anomer
PAMIAFPB_04039	0.0	-	-	-	S	ko:K03307	-	ko00000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PAMIAFPB_04040	3.04e-162	-	-	-	F	-	-	-	Hydrolase, NUDIX family
PAMIAFPB_04041	8.1e-168	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	COG COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
PAMIAFPB_04042	0.0	araA	5.3.1.4	-	G	ko:K01804	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of L-arabinose to L-ribulose
PAMIAFPB_04043	0.0	araB	-	-	G	-	-	-	Carbohydrate kinase, FGGY family protein
PAMIAFPB_04044	0.0	-	-	-	D	ko:K09955	-	ko00000	protein conserved in bacteria
PAMIAFPB_04045	0.0	abf2	3.2.1.55	GH51	G	ko:K01209	ko00520,map00520	ko00000,ko00001,ko01000	Alpha-L-arabinofuranosidase domain protein
PAMIAFPB_04046	0.0	tkt	2.2.1.1	-	H	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the transketolase family
PAMIAFPB_04047	3.25e-106	rpiB	5.3.1.6	-	G	ko:K01808	ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribose 5-phosphate isomerase
PAMIAFPB_04048	7.17e-171	-	-	-	-	-	-	-	-
PAMIAFPB_04049	1.64e-203	-	-	-	-	-	-	-	-
PAMIAFPB_04050	3.73e-240	-	4.1.1.37	-	H	ko:K01599	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Uroporphyrinogen decarboxylase (URO-D)
PAMIAFPB_04051	9.39e-182	-	-	-	E	-	-	-	Vitamin B12 dependent methionine synthase, activation domain protein
PAMIAFPB_04052	0.0	-	-	-	S	ko:K03307	-	ko00000	Sodium:solute symporter family
PAMIAFPB_04053	0.0	-	-	-	E	-	-	-	B12 binding domain
PAMIAFPB_04054	0.0	-	3.2.1.177	GH31	G	ko:K01811	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 31 family
PAMIAFPB_04055	0.0	-	-	-	P	-	-	-	Right handed beta helix region
PAMIAFPB_04056	3.32e-77	-	-	-	S	ko:K09793	-	ko00000	Psort location CytoplasmicMembrane, score 9.46
PAMIAFPB_04057	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04058	0.0	ravA_1	-	-	S	ko:K03924	-	ko00000,ko01000	ATPase family associated with various cellular activities (AAA)
PAMIAFPB_04059	1.77e-61	-	-	-	S	-	-	-	TPR repeat
PAMIAFPB_04060	3.12e-38	oorD	1.2.7.3	-	C	ko:K00176	ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200	br01601,ko00000,ko00001,ko00002,ko01000	4Fe-4S binding domain protein
PAMIAFPB_04061	7.66e-251	vorB	1.2.7.11, 1.2.7.3	-	C	ko:K00174	ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	COG0674 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin
PAMIAFPB_04062	1.44e-31	-	-	-	-	-	-	-	-
PAMIAFPB_04063	3.43e-187	vorA	1.2.7.11, 1.2.7.3	-	C	ko:K00175	ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
PAMIAFPB_04064	1.82e-125	porG	1.2.7.3	-	C	ko:K00177	ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200	br01601,ko00000,ko00001,ko00002,ko01000	2-oxoacid ferredoxin flavodoxin oxidoreductase, gamma subunit
PAMIAFPB_04065	0.0	-	-	-	H	-	-	-	COG NOG07963 non supervised orthologous group
PAMIAFPB_04066	1.19e-195	-	-	-	ET	-	-	-	COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain
PAMIAFPB_04067	7.19e-115	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PAMIAFPB_04068	1.91e-98	-	-	-	C	-	-	-	lyase activity
PAMIAFPB_04069	2.74e-96	-	-	-	-	-	-	-	-
PAMIAFPB_04070	4.44e-222	-	-	-	-	-	-	-	-
PAMIAFPB_04071	3.35e-247	-	-	-	S	-	-	-	Oxidoreductase, NAD-binding domain protein
PAMIAFPB_04072	4.25e-104	guaD	3.5.4.3	-	FJ	ko:K01487	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	Cytidine and deoxycytidylate deaminase zinc-binding region
PAMIAFPB_04073	5.43e-186	-	-	-	-	-	-	-	-
PAMIAFPB_04074	0.0	-	-	-	H	-	-	-	Susd and RagB outer membrane lipoprotein
PAMIAFPB_04075	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_04076	1.73e-108	-	-	-	S	-	-	-	MAC/Perforin domain
PAMIAFPB_04078	6.18e-44	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
PAMIAFPB_04079	8.52e-83	-	-	-	L	ko:K07497	-	ko00000	transposase activity
PAMIAFPB_04080	4.9e-68	-	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 like protein
PAMIAFPB_04081	0.0	-	-	-	L	-	-	-	Transposase IS66 family
PAMIAFPB_04082	0.0	-	-	-	I	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_04083	7.05e-150	-	-	-	S	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_04084	1.85e-204	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Methylates ribosomal protein L11
PAMIAFPB_04085	2.08e-122	isiB	-	-	C	ko:K03839	-	ko00000	Low-potential electron donor to a number of redox enzymes
PAMIAFPB_04086	0.0	bfmBAB	1.2.4.4	-	C	ko:K11381	ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130	br01601,ko00000,ko00001,ko00002,ko01000	dehydrogenase E1 component
PAMIAFPB_04087	1.74e-307	bfmBB	2.3.1.61	-	C	ko:K00658	ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 9.26
PAMIAFPB_04088	2.13e-169	lplA	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Lipoate-protein ligase
PAMIAFPB_04089	0.0	lpdA	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	Dihydrolipoyl dehydrogenase
PAMIAFPB_04090	5.3e-208	acm	-	-	M	ko:K07273	-	ko00000	phage tail component domain protein
PAMIAFPB_04091	0.0	pfp	2.7.1.11, 2.7.1.90	-	H	ko:K00895,ko:K21071	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions
PAMIAFPB_04092	0.0	-	-	-	M	ko:K18139,ko:K18300	ko01501,ko02024,map01501,map02024	ko00000,ko00001,ko00002,ko01504,ko02000	Efflux transporter, outer membrane factor lipoprotein, NodT family
PAMIAFPB_04093	0.0	-	-	-	V	-	-	-	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMIAFPB_04094	7.7e-106	-	-	-	V	-	-	-	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMIAFPB_04095	2.95e-283	-	-	-	M	ko:K03585	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMIAFPB_04096	0.0	-	-	-	M	ko:K07001	-	ko00000	Phospholipase, patatin family
PAMIAFPB_04097	1.27e-158	-	-	-	-	-	-	-	-
PAMIAFPB_04098	0.0	-	-	-	V	-	-	-	AcrB/AcrD/AcrF family
PAMIAFPB_04099	0.0	-	-	-	V	ko:K03296	-	ko00000	AcrB/AcrD/AcrF family
PAMIAFPB_04100	1.42e-247	-	-	-	M	ko:K03585	ko01501,ko01503,map01501,map01503	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	Barrel-sandwich domain of CusB or HlyD membrane-fusion
PAMIAFPB_04101	0.0	-	-	-	MU	-	-	-	Outer membrane efflux protein
PAMIAFPB_04102	0.0	-	-	-	S	-	-	-	ABC-type transport system involved in multi-copper enzyme maturation permease component
PAMIAFPB_04103	3.1e-216	-	-	-	V	-	-	-	AAA domain, putative AbiEii toxin, Type IV TA system
PAMIAFPB_04104	4.64e-295	-	-	-	S	-	-	-	COG NOG33609 non supervised orthologous group
PAMIAFPB_04105	6.11e-296	-	-	-	-	-	-	-	-
PAMIAFPB_04106	1.91e-186	-	-	-	S	-	-	-	Exopolysaccharide biosynthesis protein YbjH
PAMIAFPB_04107	5.06e-234	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
PAMIAFPB_04108	0.0	-	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 35 family
PAMIAFPB_04109	0.0	-	-	-	H	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_04110	2.7e-151	-	-	-	H	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_04111	0.0	-	-	-	-	-	-	-	-
PAMIAFPB_04112	1.33e-99	-	-	-	U	ko:K03559	-	ko00000,ko02000	Biopolymer transport protein ExbD/TolR
PAMIAFPB_04113	1.94e-100	-	-	-	U	ko:K03559	-	ko00000,ko02000	Biopolymer transport protein ExbD/TolR
PAMIAFPB_04114	0.0	-	-	-	U	ko:K03561	-	ko00000,ko02000	MotA/TolQ/ExbB proton channel family
PAMIAFPB_04115	1.16e-261	-	-	-	S	-	-	-	Leucine rich repeat protein
PAMIAFPB_04116	5.79e-316	-	-	-	S	-	-	-	P-loop ATPase and inactivated derivatives
PAMIAFPB_04117	5.71e-152	-	-	-	L	-	-	-	regulation of translation
PAMIAFPB_04118	3.84e-131	-	-	-	-	-	-	-	-
PAMIAFPB_04119	0.0	-	-	-	S	-	-	-	Type I phosphodiesterase / nucleotide pyrophosphatase
PAMIAFPB_04120	0.0	-	-	-	S	-	-	-	N-terminal domain of M60-like peptidases
PAMIAFPB_04121	0.0	-	-	-	S	-	-	-	Concanavalin A-like lectin/glucanases superfamily
PAMIAFPB_04122	0.0	-	-	-	G	-	-	-	Domain of unknown function (DUF5124)
PAMIAFPB_04123	4.01e-179	-	-	-	S	-	-	-	Fasciclin domain
PAMIAFPB_04124	0.0	-	-	-	GM	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_04125	0.0	-	-	-	P	-	-	-	Carboxypeptidase regulatory-like domain
PAMIAFPB_04126	5.47e-243	-	-	-	S	-	-	-	Domain of unknown function (DUF5007)
PAMIAFPB_04127	8.42e-193	-	-	-	M	-	-	-	COG2335, Secreted and surface protein containing fasciclin-like repeats
PAMIAFPB_04128	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	Pfam:SusD
PAMIAFPB_04129	0.0	-	-	-	P	-	-	-	TonB-dependent Receptor Plug Domain
PAMIAFPB_04130	0.0	-	-	-	T	-	-	-	cheY-homologous receiver domain
PAMIAFPB_04131	0.0	-	-	-	-	-	-	-	-
PAMIAFPB_04132	0.0	-	-	-	G	-	-	-	Ricin-type beta-trefoil lectin domain-like
PAMIAFPB_04133	0.0	-	-	-	M	-	-	-	Glycosyl hydrolases family 43
PAMIAFPB_04134	0.0	-	-	-	-	-	-	-	-
PAMIAFPB_04135	1.01e-56	-	-	-	S	-	-	-	COG NOG23371 non supervised orthologous group
PAMIAFPB_04136	4.29e-135	-	-	-	I	-	-	-	Acyltransferase
PAMIAFPB_04137	9.48e-193	ramA_1	3.5.1.3	-	S	ko:K13566	ko00250,map00250	ko00000,ko00001,ko01000	hydrolase, carbon-nitrogen family
PAMIAFPB_04138	0.0	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04139	0.0	xly	-	-	M	-	-	-	fibronectin type III domain protein
PAMIAFPB_04140	5.77e-68	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04141	4.08e-47	-	-	-	O	-	-	-	Belongs to the sulfur carrier protein TusA family
PAMIAFPB_04142	1.54e-314	-	-	-	C	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04143	1.02e-107	-	-	-	C	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04144	2.68e-129	-	-	-	-	-	-	-	-
PAMIAFPB_04145	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PAMIAFPB_04146	1.45e-180	dpm1	2.4.1.83	GT2	S	ko:K00721	ko00510,ko01100,map00510,map01100	ko00000,ko00001,ko01000,ko01003	b-glycosyltransferase, glycosyltransferase family 2 protein
PAMIAFPB_04147	0.0	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_04148	3.5e-219	metH_2	-	-	E	-	-	-	Vitamin B12 dependent methionine synthase, activation domain
PAMIAFPB_04149	3.74e-115	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PAMIAFPB_04150	7.85e-126	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_04151	1.29e-279	-	-	-	S	ko:K07098	-	ko00000	Ser Thr phosphatase family protein
PAMIAFPB_04152	0.0	sbcC	-	-	L	ko:K03546	-	ko00000,ko03400	COG0419 ATPase involved in DNA repair
PAMIAFPB_04153	2.8e-295	sbcD	-	-	L	ko:K03547	-	ko00000,ko03400	SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PAMIAFPB_04154	9.9e-202	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
PAMIAFPB_04155	3.02e-111	-	-	-	CG	-	-	-	glycosyl
PAMIAFPB_04156	2.6e-79	-	-	-	S	-	-	-	Domain of unknown function (DUF3244)
PAMIAFPB_04157	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
PAMIAFPB_04158	6.32e-169	-	-	-	S	-	-	-	COG NOG27017 non supervised orthologous group
PAMIAFPB_04159	1e-54	atsB	-	-	C	ko:K06871	-	ko00000	COG0641 Arylsulfatase regulator (Fe-S oxidoreductase)
PAMIAFPB_04160	3.58e-253	atsB	-	-	C	ko:K06871	-	ko00000	COG0641 Arylsulfatase regulator (Fe-S oxidoreductase)
PAMIAFPB_04161	0.0	dpp11	-	-	E	-	-	-	COG NOG04781 non supervised orthologous group
PAMIAFPB_04162	5.57e-135	-	-	-	S	-	-	-	COG NOG06390 non supervised orthologous group
PAMIAFPB_04163	0.0	-	-	-	S	-	-	-	COG NOG06390 non supervised orthologous group
PAMIAFPB_04165	3.69e-37	-	-	-	-	-	-	-	-
PAMIAFPB_04166	1.87e-270	-	-	-	M	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04167	5.28e-68	-	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Psort location Cytoplasmic, score
PAMIAFPB_04168	4.87e-106	-	-	-	O	-	-	-	Thioredoxin
PAMIAFPB_04169	1.95e-135	-	-	-	C	-	-	-	Nitroreductase family
PAMIAFPB_04170	2.58e-137	rbr3A	-	-	C	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04171	3.67e-102	fur	-	-	P	ko:K03711,ko:K09825	-	ko00000,ko03000	Belongs to the Fur family
PAMIAFPB_04172	9.64e-102	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04173	4.19e-160	-	-	-	S	-	-	-	Protein of unknown function (DUF1573)
PAMIAFPB_04174	0.0	-	-	-	O	-	-	-	Psort location Extracellular, score
PAMIAFPB_04175	0.0	-	-	-	S	-	-	-	Putative binding domain, N-terminal
PAMIAFPB_04176	0.0	-	-	-	S	-	-	-	leucine rich repeat protein
PAMIAFPB_04177	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF5003)
PAMIAFPB_04178	4.82e-193	-	-	-	S	-	-	-	Domain of unknown function (DUF4984)
PAMIAFPB_04179	0.0	-	-	-	K	-	-	-	Pfam:SusD
PAMIAFPB_04180	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_04181	0.0	nadE	6.3.5.1	-	H	ko:K01950	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PAMIAFPB_04182	3.85e-117	-	-	-	T	-	-	-	Tyrosine phosphatase family
PAMIAFPB_04183	2.05e-278	hisB	3.1.3.15, 4.2.1.19	-	E	ko:K01089,ko:K01693	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Histidine biosynthesis bifunctional protein HisB
PAMIAFPB_04184	1.89e-253	hisC	2.6.1.9	-	E	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PAMIAFPB_04185	2.92e-296	hisD	1.1.1.23	-	E	ko:K00013	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PAMIAFPB_04186	1.62e-195	hisG	2.4.2.17	-	F	ko:K00765	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	ATP phosphoribosyltransferase
PAMIAFPB_04187	5.38e-121	-	-	-	Q	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04188	0.0	-	-	-	S	-	-	-	Fibrobacter succinogenes major domain (Fib_succ_major)
PAMIAFPB_04189	2.95e-145	-	-	-	S	-	-	-	Protein of unknown function (DUF2490)
PAMIAFPB_04190	0.0	-	-	-	G	ko:K07783	ko02020,map02020	ko00000,ko00001,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_04191	2.28e-219	glpQ1_1	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04192	4.91e-268	-	-	-	S	-	-	-	Beta-lactamase superfamily domain
PAMIAFPB_04193	4.59e-216	-	-	-	M	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04194	0.0	-	-	-	S	-	-	-	Fibronectin type III domain
PAMIAFPB_04195	0.0	-	-	-	GM	ko:K21572	-	ko00000,ko02000	Pfam:SusD
PAMIAFPB_04196	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_04197	1.01e-225	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PAMIAFPB_04198	5.5e-91	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
PAMIAFPB_04199	2.32e-175	-	-	-	S	ko:K06911	-	ko00000	Belongs to the pirin family
PAMIAFPB_04200	2.17e-313	-	-	-	L	-	-	-	COG COG3666 Transposase and inactivated derivatives
PAMIAFPB_04201	0.0	dsbD	1.8.1.8	-	CO	ko:K04084	-	ko00000,ko01000,ko03110	cytochrome c biogenesis protein transmembrane region
PAMIAFPB_04202	2.43e-64	-	-	-	S	-	-	-	Stress responsive A B barrel domain protein
PAMIAFPB_04203	3.19e-145	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_04204	0.0	mltF	-	-	M	ko:K18691	-	ko00000,ko01000,ko01011	soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein
PAMIAFPB_04205	0.0	-	-	-	E	ko:K03307	-	ko00000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PAMIAFPB_04206	2.44e-25	-	-	-	-	-	-	-	-
PAMIAFPB_04207	3.08e-140	-	-	-	C	-	-	-	COG0778 Nitroreductase
PAMIAFPB_04208	0.0	metH	2.1.1.13	-	E	ko:K00548	ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_04209	7.84e-101	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PAMIAFPB_04210	9.36e-124	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_04211	5.84e-183	-	-	-	S	-	-	-	COG NOG34011 non supervised orthologous group
PAMIAFPB_04212	1.44e-113	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04213	3.61e-96	-	-	-	-	-	-	-	-
PAMIAFPB_04214	8.08e-171	-	-	-	C	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04215	5.76e-243	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04216	3e-80	-	-	-	-	-	-	-	-
PAMIAFPB_04217	0.0	-	-	-	G	-	-	-	COG NOG27433 non supervised orthologous group
PAMIAFPB_04218	3.42e-68	-	-	-	S	-	-	-	Protein of unknown function (DUF1622)
PAMIAFPB_04219	1.12e-268	-	-	-	L	-	-	-	COG NOG19081 non supervised orthologous group
PAMIAFPB_04220	6.79e-222	-	-	-	S	-	-	-	HEPN domain
PAMIAFPB_04222	5.84e-129	-	-	-	CO	-	-	-	Redoxin
PAMIAFPB_04223	1.6e-94	mip	5.2.1.8	-	O	ko:K01802	-	ko00000,ko01000	COG COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1
PAMIAFPB_04224	0.0	-	-	-	S	ko:K06894	-	ko00000	COG2373 Large extracellular alpha-helical protein
PAMIAFPB_04225	0.0	pbpC	2.4.1.129	GT51	M	ko:K05367	ko00550,map00550	ko00000,ko00001,ko01000,ko01003,ko01011	COG4953 Membrane carboxypeptidase penicillin-binding protein PbpC
PAMIAFPB_04226	1.28e-276	ynfM	-	-	EGP	ko:K08224	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_04227	4.11e-100	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
PAMIAFPB_04228	1.21e-189	-	-	-	S	-	-	-	VIT family
PAMIAFPB_04229	0.0	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_04230	2.8e-105	-	-	-	S	-	-	-	COG NOG27363 non supervised orthologous group
PAMIAFPB_04231	2.69e-149	narL	-	-	K	-	-	-	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PAMIAFPB_04232	1.07e-266	trmU	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PAMIAFPB_04233	0.0	-	-	-	M	-	-	-	peptidase S41
PAMIAFPB_04234	1.58e-206	-	-	-	S	-	-	-	COG NOG30864 non supervised orthologous group
PAMIAFPB_04235	1.46e-197	-	3.1.2.12	CE1	S	ko:K01070	ko00680,ko01120,ko01200,map00680,map01120,map01200	ko00000,ko00001,ko01000	esterase
PAMIAFPB_04236	1.78e-72	-	-	-	S	-	-	-	COG NOG29214 non supervised orthologous group
PAMIAFPB_04237	0.0	-	-	-	P	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_04238	2.39e-179	loiP	-	-	M	ko:K07387	-	ko00000,ko01000,ko01002	COG0501 Zn-dependent protease with chaperone function
PAMIAFPB_04240	5.58e-290	corC_1	-	-	P	ko:K03699	-	ko00000,ko02042	Psort location CytoplasmicMembrane, score
PAMIAFPB_04241	8.15e-99	-	-	-	MP	ko:K06079	ko01503,map01503	ko00000,ko00001	COG NOG29769 non supervised orthologous group
PAMIAFPB_04242	2.54e-311	-	3.2.1.180	GH88	S	ko:K18581	-	ko00000,ko01000	Glycosyl Hydrolase Family 88
PAMIAFPB_04243	0.0	xynBA	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 43 family
PAMIAFPB_04244	0.0	-	-	-	S	-	-	-	COG NOG07966 non supervised orthologous group
PAMIAFPB_04245	0.0	-	-	-	N	-	-	-	Bacterial group 2 Ig-like protein
PAMIAFPB_04246	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	COG NOG28394 non supervised orthologous group
PAMIAFPB_04247	0.0	-	-	-	H	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_04249	1.35e-118	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PAMIAFPB_04250	0.0	-	-	-	KT	-	-	-	Two component regulator propeller
PAMIAFPB_04251	0.0	-	-	-	D	ko:K09955	-	ko00000	protein conserved in bacteria
PAMIAFPB_04252	8.24e-136	-	-	-	S	-	-	-	Serine hydrolase involved in the detoxification of formaldehyde
PAMIAFPB_04253	2.32e-246	-	-	-	S	-	-	-	Serine hydrolase involved in the detoxification of formaldehyde
PAMIAFPB_04254	4.68e-188	-	-	-	DT	-	-	-	aminotransferase class I and II
PAMIAFPB_04255	2.6e-88	-	-	-	S	-	-	-	Protein of unknown function (DUF3037)
PAMIAFPB_04256	2.31e-192	murQ	4.2.1.126	-	H	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PAMIAFPB_04257	0.0	-	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Glycosyl-hydrolase 97 C-terminal, oligomerisation
PAMIAFPB_04258	3.98e-190	uxuB_1	-	-	IQ	-	-	-	Oxidoreductase, short chain dehydrogenase reductase family protein
PAMIAFPB_04259	5.4e-296	uxuA	4.2.1.8	-	H	ko:K01686	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the dehydration of D-mannonate
PAMIAFPB_04260	6.4e-80	-	-	-	-	-	-	-	-
PAMIAFPB_04261	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 28 family
PAMIAFPB_04262	0.0	-	-	-	S	-	-	-	Heparinase II/III-like protein
PAMIAFPB_04263	4.64e-131	-	-	-	S	-	-	-	Heparinase II/III-like protein
PAMIAFPB_04264	0.0	nuoF	1.12.1.3, 1.6.5.3	-	C	ko:K00335,ko:K18331	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
PAMIAFPB_04265	0.0	hndD	1.12.1.3, 1.17.1.9	-	C	ko:K00123,ko:K18332	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	ko00000,ko00001,ko01000	COG COG4624 Iron only hydrogenase large subunit, C-terminal domain
PAMIAFPB_04266	1.82e-112	hndA	1.12.1.3	-	C	ko:K18330	-	ko00000,ko01000	COG COG1905 NADH ubiquinone oxidoreductase 24 kD subunit
PAMIAFPB_04267	4.25e-249	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PAMIAFPB_04269	3.52e-58	-	-	-	S	-	-	-	Helix-turn-helix domain
PAMIAFPB_04272	2.91e-181	-	-	-	-	-	-	-	-
PAMIAFPB_04273	3.74e-69	-	-	-	-	-	-	-	-
PAMIAFPB_04274	1.39e-169	-	-	-	-	-	-	-	-
PAMIAFPB_04275	1.54e-35	-	-	-	-	-	-	-	-
PAMIAFPB_04276	1.66e-220	-	-	-	-	-	-	-	-
PAMIAFPB_04277	2.51e-145	-	-	-	S	-	-	-	RteC protein
PAMIAFPB_04278	5.76e-303	-	-	-	T	ko:K07713	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	acetoacetate metabolism regulatory protein AtoC K07714
PAMIAFPB_04279	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_04280	1.15e-164	feoB	-	-	P	ko:K04759	-	ko00000,ko02000	transporter of a GTP-driven Fe(2 ) uptake system
PAMIAFPB_04281	7.68e-20	feoB	-	-	P	ko:K04759	-	ko00000,ko02000	transporter of a GTP-driven Fe(2 ) uptake system
PAMIAFPB_04282	7.47e-72	feoB	-	-	P	ko:K04759	-	ko00000,ko02000	transporter of a GTP-driven Fe(2 ) uptake system
PAMIAFPB_04283	2.87e-64	-	-	-	P	ko:K03711	-	ko00000,ko03000	Belongs to the Fur family
PAMIAFPB_04285	4.01e-123	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Metallopeptidase family M24
PAMIAFPB_04286	7.37e-07	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine aminopeptidase
PAMIAFPB_04287	3.05e-276	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	cadmium-exporting ATPase
PAMIAFPB_04289	1.96e-133	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_04290	4.55e-44	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_04291	5.01e-226	-	-	-	S	-	-	-	COG NOG26801 non supervised orthologous group
PAMIAFPB_04292	0.0	-	-	-	S	-	-	-	non supervised orthologous group
PAMIAFPB_04293	0.0	-	-	-	-	-	-	-	-
PAMIAFPB_04294	2.2e-255	-	-	-	S	-	-	-	COG NOG25284 non supervised orthologous group
PAMIAFPB_04295	0.0	-	-	-	H	ko:K02014	-	ko00000,ko02000	PFAM TonB-dependent receptor, beta-barrel
PAMIAFPB_04296	4.06e-267	-	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component
PAMIAFPB_04297	2.67e-195	btuC	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PAMIAFPB_04298	2.41e-175	-	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components
PAMIAFPB_04299	1.61e-141	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04300	1.95e-25	-	-	-	-	-	-	-	-
PAMIAFPB_04301	9.3e-229	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04302	1.32e-144	-	-	-	-	-	-	-	-
PAMIAFPB_04303	0.0	-	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
PAMIAFPB_04304	2.17e-313	-	-	-	L	-	-	-	COG COG3666 Transposase and inactivated derivatives
PAMIAFPB_04305	8.28e-47	-	-	-	-	-	-	-	-
PAMIAFPB_04306	1.27e-71	-	-	-	-	-	-	-	-
PAMIAFPB_04307	3.08e-142	-	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Peptidase family M48
PAMIAFPB_04308	1.3e-74	-	-	-	MP	-	-	-	NlpE N-terminal domain
PAMIAFPB_04309	3.58e-238	-	-	-	-	-	-	-	-
PAMIAFPB_04310	0.0	-	-	-	H	ko:K02014	-	ko00000,ko02000	TonB dependent receptor
PAMIAFPB_04311	6.75e-40	-	-	-	-	-	-	-	-
PAMIAFPB_04312	4.15e-136	-	-	-	S	ko:K06911	-	ko00000	Belongs to the pirin family
PAMIAFPB_04313	3.6e-55	-	-	-	S	-	-	-	YceI-like domain
PAMIAFPB_04314	4.98e-93	-	-	-	Q	-	-	-	Isochorismatase family
PAMIAFPB_04316	6.4e-57	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PAMIAFPB_04318	1.63e-116	eamA	-	-	EG	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_04320	5.09e-92	-	-	-	S	-	-	-	Domain of unknown function, B. Theta Gene description (DUF3872)
PAMIAFPB_04321	2.33e-129	-	-	-	S	-	-	-	Conjugative transposon protein TraO
PAMIAFPB_04322	2.89e-197	-	-	-	U	-	-	-	Domain of unknown function (DUF4138)
PAMIAFPB_04323	9.55e-63	-	-	-	S	-	-	-	Conjugative transposon, TraM
PAMIAFPB_04324	1.39e-147	traM	-	-	S	-	-	-	Conjugative transposon TraM protein
PAMIAFPB_04326	3.96e-13	-	-	-	-	-	-	-	-
PAMIAFPB_04327	5.05e-217	-	-	-	S	-	-	-	Homologues of TraJ from Bacteroides conjugative transposon
PAMIAFPB_04328	1.03e-89	-	-	-	U	-	-	-	Domain of unknown function (DUF4141)
PAMIAFPB_04329	0.0	-	-	-	L	-	-	-	COG COG3344 Retron-type reverse transcriptase
PAMIAFPB_04331	4.89e-32	traI	-	-	U	ko:K20266	ko02024,map02024	ko00000,ko00001,ko02044	conjugation
PAMIAFPB_04332	3.22e-54	-	-	-	-	-	-	-	-
PAMIAFPB_04333	2.29e-24	-	-	-	-	-	-	-	-
PAMIAFPB_04334	9.89e-95	-	-	-	U	-	-	-	type IV secretory pathway VirB4
PAMIAFPB_04335	0.0	-	-	-	U	-	-	-	AAA-like domain
PAMIAFPB_04336	1.03e-30	-	-	-	U	-	-	-	Domain of unknown function, B. Theta Gene description (DUF3875)
PAMIAFPB_04337	8.17e-64	-	-	-	S	-	-	-	Domain of unknown function (DUF4133)
PAMIAFPB_04338	2.53e-59	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_04339	2.75e-100	-	-	-	C	-	-	-	radical SAM domain protein
PAMIAFPB_04340	1.89e-91	-	-	-	C	-	-	-	radical SAM domain protein
PAMIAFPB_04341	2.36e-161	-	-	-	-	-	-	-	-
PAMIAFPB_04342	1.22e-82	-	-	-	S	-	-	-	Protein of unknown function (DUF3408)
PAMIAFPB_04343	5.44e-91	-	-	-	D	-	-	-	Involved in chromosome partitioning
PAMIAFPB_04344	7.36e-34	-	-	-	-	-	-	-	-
PAMIAFPB_04345	2.07e-13	-	-	-	-	-	-	-	-
PAMIAFPB_04346	4.94e-217	-	-	-	U	-	-	-	Relaxase/Mobilisation nuclease domain
PAMIAFPB_04347	9.25e-37	-	-	-	U	-	-	-	YWFCY protein
PAMIAFPB_04348	0.0	-	-	-	U	-	-	-	AAA-like domain
PAMIAFPB_04349	0.0	-	-	-	L	-	-	-	Transposase C of IS166 homeodomain
PAMIAFPB_04350	5.14e-88	-	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 like protein
PAMIAFPB_04351	5.02e-84	-	-	-	L	ko:K07497	-	ko00000	transposase activity
PAMIAFPB_04353	5.76e-82	-	-	-	-	-	-	-	-
PAMIAFPB_04354	5.65e-35	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_04356	8.27e-120	-	-	-	S	-	-	-	AAA ATPase domain
PAMIAFPB_04359	0.0	-	-	-	L	ko:K19172	-	ko00000,ko02048	DNA sulphur modification protein DndE
PAMIAFPB_04360	0.0	dndD	-	-	D	ko:K19171	-	ko00000,ko02048	DNA sulfur modification protein DndD
PAMIAFPB_04361	0.0	-	-	-	EH	ko:K19170	-	ko00000,ko02048	Phosphoadenosine phosphosulfate reductase family
PAMIAFPB_04362	1.05e-293	-	-	-	S	-	-	-	Protein of unknown function (DUF4099)
PAMIAFPB_04363	3.16e-83	-	-	-	S	-	-	-	Domain of unknown function (DUF1896)
PAMIAFPB_04364	6.96e-37	-	-	-	-	-	-	-	-
PAMIAFPB_04365	5.43e-117	-	-	-	L	-	-	-	Helicase C-terminal domain protein
PAMIAFPB_04366	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
PAMIAFPB_04367	1.09e-223	-	-	-	KL	-	-	-	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
PAMIAFPB_04368	2.31e-69	-	-	-	-	-	-	-	-
PAMIAFPB_04369	3.99e-64	-	-	-	-	-	-	-	-
PAMIAFPB_04370	6.32e-291	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_04372	0.0	pflB	2.3.1.54	-	C	ko:K00656	ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 9.97
PAMIAFPB_04373	4.5e-177	pflA	1.97.1.4	-	C	ko:K04069	-	ko00000,ko01000	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PAMIAFPB_04374	4.55e-113	-	3.5.1.28	-	V	ko:K01447	-	ko00000,ko01000	N-acetylmuramoyl-L-alanine amidase
PAMIAFPB_04375	1.5e-25	-	-	-	-	-	-	-	-
PAMIAFPB_04376	7.91e-91	-	-	-	L	-	-	-	DNA-binding protein
PAMIAFPB_04377	5.12e-42	-	-	-	S	-	-	-	Domain of unknown function (DUF4248)
PAMIAFPB_04378	0.0	-	-	-	S	-	-	-	Virulence-associated protein E
PAMIAFPB_04379	1.9e-62	-	-	-	K	-	-	-	Helix-turn-helix
PAMIAFPB_04380	1.33e-73	-	-	-	S	-	-	-	Phage derived protein Gp49-like (DUF891)
PAMIAFPB_04381	1.18e-06	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04382	3.03e-52	-	-	-	K	-	-	-	Helix-turn-helix
PAMIAFPB_04383	1.39e-61	-	-	-	S	-	-	-	Toxin-antitoxin system, toxin component, RelE family
PAMIAFPB_04384	2.37e-14	-	-	-	-	-	-	-	-
PAMIAFPB_04385	0.0	-	-	-	G	ko:K07783	ko02020,map02020	ko00000,ko00001,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_04386	1.62e-219	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	COG0584 Glycerophosphoryl diester phosphodiesterase
PAMIAFPB_04387	1.81e-72	-	-	-	C	-	-	-	PKD domain
PAMIAFPB_04388	0.0	-	-	-	C	-	-	-	PKD domain
PAMIAFPB_04389	0.0	-	-	-	J	ko:K21572	-	ko00000,ko02000	Pfam:SusD
PAMIAFPB_04390	0.0	-	-	-	P	-	-	-	Secretin and TonB N terminus short domain
PAMIAFPB_04391	2.6e-280	-	-	-	P	-	-	-	Secretin and TonB N terminus short domain
PAMIAFPB_04392	8.77e-237	-	-	-	PT	-	-	-	COG3712 Fe2 -dicitrate sensor, membrane component
PAMIAFPB_04393	5.99e-130	-	-	-	K	ko:K03088	-	ko00000,ko03021	ECF sigma factor
PAMIAFPB_04394	3.63e-288	-	-	-	K	-	-	-	Outer membrane protein beta-barrel domain
PAMIAFPB_04395	6.34e-127	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PAMIAFPB_04396	1.23e-166	-	-	-	S	-	-	-	COG NOG31568 non supervised orthologous group
PAMIAFPB_04397	1.89e-150	aqpZ	-	-	G	ko:K06188	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
PAMIAFPB_04398	1.32e-219	-	-	-	EG	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_04399	1.13e-219	oxyR	-	-	K	ko:K04761	ko02026,map02026	ko00000,ko00001,ko03000	Psort location Cytoplasmic, score 9.97
PAMIAFPB_04400	1.29e-64	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
PAMIAFPB_04401	0.0	-	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	glycosyl hydrolase, family 3
PAMIAFPB_04402	0.0	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	F5 8 type C domain protein
PAMIAFPB_04403	1.74e-176	-	-	-	S	-	-	-	Protein of unknown function (DUF1573)
PAMIAFPB_04404	5.83e-222	-	-	-	S	-	-	-	Domain of unknown function (DUF1735)
PAMIAFPB_04405	5.41e-295	-	-	-	S	-	-	-	Concanavalin A-like lectin/glucanases superfamily
PAMIAFPB_04406	3.07e-240	-	-	-	G	-	-	-	Putative glycoside hydrolase Family 18, chitinase_18
PAMIAFPB_04407	0.0	-	-	-	S	-	-	-	Susd and RagB outer membrane lipoprotein
PAMIAFPB_04408	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_04409	5.17e-220	-	-	-	PT	-	-	-	Sigma factor regulatory protein, FecR PupR family
PAMIAFPB_04410	3e-133	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor, ECF subfamily
PAMIAFPB_04411	6.62e-258	menE	6.2.1.26	-	IQ	ko:K01911	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04412	8.36e-259	menC	-	-	M	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04413	6.93e-197	menB	4.1.3.36	-	H	ko:K01661	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PAMIAFPB_04414	0.0	menD	2.2.1.9	-	H	ko:K02551	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
PAMIAFPB_04415	1.75e-277	entC	5.4.4.2	-	HQ	ko:K02361,ko:K02552	ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Isochorismate synthase
PAMIAFPB_04416	8.32e-294	ydiI	3.1.2.28	-	Q	ko:K19222	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04417	1.27e-87	-	-	-	S	-	-	-	Protein of unknown function, DUF488
PAMIAFPB_04418	0.0	-	-	-	K	-	-	-	COG NOG18216 non supervised orthologous group
PAMIAFPB_04419	4.51e-188	-	-	-	M	-	-	-	COG NOG10981 non supervised orthologous group
PAMIAFPB_04420	1.12e-285	czcC_2	-	-	MU	ko:K15725	-	ko00000,ko02000	Outer membrane efflux protein
PAMIAFPB_04421	0.0	-	-	-	P	ko:K15726	-	ko00000,ko02000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMIAFPB_04422	5.21e-253	-	-	-	M	ko:K15727	-	ko00000,ko02000	Barrel-sandwich domain of CusB or HlyD membrane-fusion
PAMIAFPB_04423	0.0	-	-	-	-	-	-	-	-
PAMIAFPB_04424	1.28e-229	rlmF	2.1.1.181	-	J	ko:K06970	-	ko00000,ko01000,ko03009	Specifically methylates the adenine in position 1618 of 23S rRNA
PAMIAFPB_04425	0.0	amyS	3.2.1.1	GH13	G	ko:K01176	ko00500,ko01100,ko04973,map00500,map01100,map04973	ko00000,ko00001,ko01000	Alpha-amylase domain
PAMIAFPB_04426	0.0	-	3.2.1.41	CBM48,GH13	G	ko:K01200	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
PAMIAFPB_04427	1.41e-243	-	-	-	M	ko:K16052	-	ko00000,ko02000	Mechanosensitive ion channel
PAMIAFPB_04429	5.58e-103	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
PAMIAFPB_04430	3.95e-169	-	-	-	PT	-	-	-	Sigma factor regulatory protein, FecR PupR family
PAMIAFPB_04431	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_04432	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_04433	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
PAMIAFPB_04434	0.0	-	3.1.6.1	-	P	ko:K01130	ko00140,ko00600,map00140,map00600	ko00000,ko00001,ko01000	COG COG3119 Arylsulfatase A and related enzymes
PAMIAFPB_04435	0.0	-	3.2.1.51	GH95	G	ko:K15923	ko00511,map00511	ko00000,ko00001,ko01000	COG NOG04001 non supervised orthologous group
PAMIAFPB_04436	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain
PAMIAFPB_04437	1.41e-226	-	-	-	G	-	-	-	Histidine acid phosphatase
PAMIAFPB_04439	1.68e-132	-	-	-	S	-	-	-	NHL repeat
PAMIAFPB_04440	5.69e-08	-	-	-	V	-	-	-	NHL repeat
PAMIAFPB_04441	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_04442	3.28e-221	-	-	-	P	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_04443	8.02e-45	-	-	-	S	-	-	-	Domain of unknown function (DUF4361)
PAMIAFPB_04444	0.0	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_04445	1.3e-205	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04446	1.09e-66	-	-	-	S	-	-	-	Protein of unknown function (DUF3853)
PAMIAFPB_04447	4.98e-250	-	-	-	T	-	-	-	COG NOG25714 non supervised orthologous group
PAMIAFPB_04448	9.74e-210	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04449	1.68e-309	-	-	-	D	-	-	-	Plasmid recombination enzyme
PAMIAFPB_04450	1.63e-114	-	-	-	S	-	-	-	Outer membrane protein beta-barrel domain
PAMIAFPB_04451	0.0	fmo	-	-	S	ko:K11031	ko02024,map02024	ko00000,ko00001,ko02042	Thiol-activated cytolysin
PAMIAFPB_04452	1.49e-213	fmo	-	-	S	ko:K11031	ko02024,map02024	ko00000,ko00001,ko02042	Thiol-activated cytolysin
PAMIAFPB_04453	9.61e-183	-	-	-	-	-	-	-	-
PAMIAFPB_04455	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PAMIAFPB_04456	6.33e-254	corA	-	-	P	ko:K03284	-	ko00000,ko02000	Mediates influx of magnesium ions
PAMIAFPB_04457	1.32e-295	sdaA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	COG1760 L-serine deaminase
PAMIAFPB_04458	5.15e-125	-	-	-	S	-	-	-	COG NOG31242 non supervised orthologous group
PAMIAFPB_04459	1.17e-96	-	-	-	S	-	-	-	COG NOG31508 non supervised orthologous group
PAMIAFPB_04460	5.64e-288	-	4.2.2.7	PL13	M	ko:K19050	-	ko00000,ko01000	Heparin lyase
PAMIAFPB_04461	9.33e-125	-	-	-	S	-	-	-	COG NOG28695 non supervised orthologous group
PAMIAFPB_04462	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_04464	0.0	-	-	-	P	ko:K21573	-	ko00000,ko02000	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_04465	0.0	-	-	-	M	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_04466	0.0	-	-	-	S	ko:K21571	-	ko00000	Domain of unknown function (DUF5114)
PAMIAFPB_04467	3.2e-269	ganB	3.2.1.89	-	G	ko:K01224	-	ko00000,ko01000	arabinogalactan endo-1,4-beta-galactosidase
PAMIAFPB_04468	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
PAMIAFPB_04470	6.16e-27	-	2.3.1.29, 2.3.1.47	-	E	ko:K00639,ko:K00652	ko00260,ko00780,ko01100,map00260,map00780,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Beta-eliminating lyase
PAMIAFPB_04471	2.63e-104	-	2.3.1.29, 2.3.1.47	-	E	ko:K00639,ko:K00652	ko00260,ko00780,ko01100,map00260,map00780,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Beta-eliminating lyase
PAMIAFPB_04472	8.26e-49	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAMIAFPB_04475	5.87e-76	-	-	-	L	-	-	-	COG NOG14720 non supervised orthologous group
PAMIAFPB_04479	4.48e-67	-	-	-	M	-	-	-	Chaperone of endosialidase
PAMIAFPB_04480	1.02e-59	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_04481	7.06e-182	-	-	-	O	-	-	-	Peptidase, S8 S53 family
PAMIAFPB_04483	8e-146	-	-	-	S	-	-	-	cellulose binding
PAMIAFPB_04484	2.3e-257	-	-	-	S	-	-	-	Endonuclease Exonuclease phosphatase family
PAMIAFPB_04485	1.01e-157	ktrA	-	-	C	ko:K03499	-	ko00000,ko02000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04486	0.0	ktrB	-	-	P	ko:K03498	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_04487	0.0	trpB	4.2.1.20	-	E	ko:K06001	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PAMIAFPB_04488	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_04489	0.0	-	4.2.2.8	PL12	M	ko:K19052	-	ko00000,ko01000	Heparinase II III-like protein
PAMIAFPB_04490	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4958)
PAMIAFPB_04491	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_04492	0.0	-	-	-	GM	ko:K21572	-	ko00000,ko02000	Pfam:SusD
PAMIAFPB_04493	0.0	-	-	-	S	-	-	-	Glycosyl Hydrolase Family 88
PAMIAFPB_04494	0.0	-	4.2.2.8	PL12	M	ko:K19052	-	ko00000,ko01000	Heparinase II III-like protein
PAMIAFPB_04495	0.0	-	-	-	P	-	-	-	COG COG3119 Arylsulfatase A and related enzymes
PAMIAFPB_04496	0.0	-	-	-	S	-	-	-	PHP domain protein
PAMIAFPB_04497	1.55e-226	-	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
PAMIAFPB_04498	3.94e-287	-	-	-	G	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_04499	0.0	hepB	-	-	S	-	-	-	Heparinase II III-like protein
PAMIAFPB_04500	2.43e-203	nfo	3.1.21.2	-	L	ko:K01151	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PAMIAFPB_04501	0.0	-	-	-	P	-	-	-	ATP synthase F0, A subunit
PAMIAFPB_04502	7.51e-125	-	-	-	-	-	-	-	-
PAMIAFPB_04503	8.01e-77	-	-	-	-	-	-	-	-
PAMIAFPB_04504	1.19e-120	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
PAMIAFPB_04505	5.36e-36	-	-	-	S	-	-	-	COG NOG17973 non supervised orthologous group
PAMIAFPB_04506	0.0	-	-	-	S	-	-	-	CarboxypepD_reg-like domain
PAMIAFPB_04507	8.1e-199	-	-	-	PT	-	-	-	Sigma factor regulatory protein, FecR PupR family
PAMIAFPB_04508	6.05e-121	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
PAMIAFPB_04509	1.41e-305	-	-	-	S	-	-	-	CarboxypepD_reg-like domain
PAMIAFPB_04510	9.67e-104	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PAMIAFPB_04511	1.66e-100	-	-	-	-	-	-	-	-
PAMIAFPB_04512	5.26e-148	-	-	-	S	ko:K03975	-	ko00000	Psort location CytoplasmicMembrane, score
PAMIAFPB_04513	7.46e-149	-	-	-	P	ko:K07220	-	ko00000	COG1392 Phosphate transport regulator (distant homolog of PhoU)
PAMIAFPB_04514	3.26e-230	pitA	-	-	P	ko:K03306	-	ko00000	Phosphate transporter family
PAMIAFPB_04515	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
PAMIAFPB_04516	3.54e-184	-	-	-	O	-	-	-	META domain
PAMIAFPB_04517	3.73e-301	-	-	-	-	-	-	-	-
PAMIAFPB_04518	7.78e-306	LYS1	1.5.1.7	-	E	ko:K00290	ko00300,ko00310,ko01100,ko01110,ko01130,ko01230,map00300,map00310,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	COG1748 Saccharopine dehydrogenase and related
PAMIAFPB_04519	7.84e-106	bcp	1.11.1.15	-	O	ko:K03564	-	ko00000,ko01000	bacterioferritin comigratory protein
PAMIAFPB_04520	1.46e-240	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PAMIAFPB_04521	3.13e-228	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_04522	6.98e-78	yccF	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_04523	9.9e-209	cysL	-	-	K	-	-	-	LysR substrate binding domain protein
PAMIAFPB_04524	4.39e-133	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04525	0.0	clpB	-	-	O	ko:K03695	ko04213,map04213	ko00000,ko00001,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PAMIAFPB_04526	6.88e-54	-	-	-	-	-	-	-	-
PAMIAFPB_04527	3.12e-95	-	-	-	S	-	-	-	COG NOG14473 non supervised orthologous group
PAMIAFPB_04528	2.51e-137	coaE	2.7.1.24	-	H	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PAMIAFPB_04529	2.85e-193	-	-	-	S	-	-	-	COG NOG14472 non supervised orthologous group
PAMIAFPB_04530	7.89e-57	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	COG1862 Preprotein translocase subunit YajC
PAMIAFPB_04531	8.74e-208	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PAMIAFPB_04532	9.96e-85	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04533	3.45e-131	ctc	-	-	J	ko:K02897	ko03010,map03010	ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PAMIAFPB_04534	6.55e-137	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PAMIAFPB_04535	3.03e-91	hslR	-	-	J	ko:K04762	-	ko00000,ko03110	COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
PAMIAFPB_04536	3.28e-100	-	-	-	FG	-	-	-	Histidine triad domain protein
PAMIAFPB_04537	0.0	nhaA	-	-	P	ko:K03455	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_04538	4.72e-87	-	-	-	-	-	-	-	-
PAMIAFPB_04539	1.22e-103	-	-	-	-	-	-	-	-
PAMIAFPB_04540	7e-268	gcvT	2.1.2.10	-	H	ko:K00605	ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002,ko01000	The glycine cleavage system catalyzes the degradation of glycine
PAMIAFPB_04541	8.35e-297	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
PAMIAFPB_04542	0.0	purF	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	glutamine phosphoribosylpyrophosphate amidotransferase
PAMIAFPB_04543	0.0	susB	3.2.1.20, 3.2.1.3	GH31,GH97	G	ko:K01187,ko:K21574	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	COG NOG06228 non supervised orthologous group
PAMIAFPB_04544	1.4e-198	-	-	-	M	-	-	-	Peptidase family M23
PAMIAFPB_04545	1.2e-189	-	-	-	-	-	-	-	-
PAMIAFPB_04546	7.85e-84	crcB	-	-	D	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PAMIAFPB_04547	8.42e-69	-	-	-	S	-	-	-	Pentapeptide repeat protein
PAMIAFPB_04548	6.5e-306	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PAMIAFPB_04549	4.44e-127	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
PAMIAFPB_04550	3.33e-88	-	-	-	-	-	-	-	-
PAMIAFPB_04551	7.61e-272	-	-	-	-	-	-	-	-
PAMIAFPB_04552	0.0	-	-	-	P	-	-	-	Outer membrane protein beta-barrel family
PAMIAFPB_04553	4.38e-243	-	-	-	T	-	-	-	Histidine kinase
PAMIAFPB_04554	6.09e-162	-	-	-	K	-	-	-	LytTr DNA-binding domain
PAMIAFPB_04556	7.47e-125	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_04557	3.29e-232	arnC	-	-	M	-	-	-	involved in cell wall biogenesis
PAMIAFPB_04558	5.28e-167	-	-	-	S	-	-	-	COG NOG28307 non supervised orthologous group
PAMIAFPB_04559	5.54e-131	mntP	-	-	P	-	-	-	Probably functions as a manganese efflux pump
PAMIAFPB_04560	2.55e-247	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PAMIAFPB_04561	8.85e-85	-	-	-	S	ko:K09922	-	ko00000	Psort location CytoplasmicMembrane, score
PAMIAFPB_04562	1.5e-178	ttcA	-	-	H	ko:K14058	-	ko00000,ko03016	Belongs to the TtcA family
PAMIAFPB_04563	0.0	-	-	-	S	-	-	-	COG NOG11656 non supervised orthologous group
PAMIAFPB_04564	1.07e-85	-	-	-	O	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_04565	2.19e-209	-	-	-	S	-	-	-	UPF0365 protein
PAMIAFPB_04566	8.57e-216	udp	2.4.2.3	-	F	ko:K00757	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_04567	0.0	-	-	-	L	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
PAMIAFPB_04568	9.82e-156	-	-	-	S	ko:K07118	-	ko00000	NmrA-like family
PAMIAFPB_04569	1.29e-36	-	-	-	T	-	-	-	Histidine kinase
PAMIAFPB_04570	9.25e-31	-	-	-	T	-	-	-	Histidine kinase
PAMIAFPB_04571	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PAMIAFPB_04572	3.12e-91	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
PAMIAFPB_04573	0.0	-	-	-	L	-	-	-	helicase
PAMIAFPB_04574	8.04e-70	-	-	-	S	-	-	-	dUTPase
PAMIAFPB_04575	0.0	-	-	-	L	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
PAMIAFPB_04576	4.49e-192	-	-	-	-	-	-	-	-
PAMIAFPB_04577	3.03e-187	spoU	-	-	H	ko:K03437	-	ko00000,ko03016	RNA methyltransferase TrmH family
PAMIAFPB_04578	3.87e-264	yjmD_2	-	-	E	ko:K18369	ko00640,map00640	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_04579	6.56e-106	-	-	-	S	-	-	-	COG NOG19145 non supervised orthologous group
PAMIAFPB_04580	0.0	-	-	-	S	-	-	-	P-loop ATPase and inactivated derivatives
PAMIAFPB_04581	2.17e-191	-	-	-	S	-	-	-	HEPN domain
PAMIAFPB_04582	1.3e-117	-	-	-	S	-	-	-	Nucleotidyl transferase AbiEii toxin, Type IV TA system
PAMIAFPB_04583	1.79e-79	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
PAMIAFPB_04584	3.24e-290	-	-	-	S	-	-	-	SEC-C motif
PAMIAFPB_04585	8.89e-214	per1	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	COG2367 Beta-lactamase class A
PAMIAFPB_04586	0.0	gloA	4.4.1.5	-	E	ko:K01759,ko:K03827	ko00620,map00620	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_04587	1.5e-124	-	-	-	S	-	-	-	COG NOG35345 non supervised orthologous group
PAMIAFPB_04588	2.11e-148	-	-	-	U	ko:K05595	-	ko00000,ko02000	MarC family integral membrane protein
PAMIAFPB_04589	6.92e-106	nodN	-	-	I	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04590	1.7e-128	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
PAMIAFPB_04591	7.06e-237	-	-	-	S	ko:K03307	-	ko00000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PAMIAFPB_04592	1.34e-146	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 5 (cellulase A) family
PAMIAFPB_04593	2.44e-198	-	2.4.1.339, 2.4.1.340	GH130	G	ko:K20885	-	ko00000,ko01000	Pfam:DUF377
PAMIAFPB_04594	0.0	-	3.2.1.40	-	G	ko:K05989	-	ko00000,ko01000	Alpha-L-rhamnosidase N-terminal domain protein
PAMIAFPB_04595	5.87e-176	-	-	-	GM	-	-	-	Parallel beta-helix repeats
PAMIAFPB_04596	1.05e-180	-	-	-	GM	-	-	-	Parallel beta-helix repeats
PAMIAFPB_04597	2.46e-33	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PAMIAFPB_04598	4.16e-152	-	-	-	F	ko:K21572	-	ko00000,ko02000	PFAM SusD family
PAMIAFPB_04599	0.0	-	-	-	P	-	-	-	TonB-dependent receptor plug
PAMIAFPB_04600	7.78e-106	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PAMIAFPB_04601	0.0	rluA	5.4.99.28, 5.4.99.29	-	J	ko:K06177	-	ko00000,ko01000,ko03009,ko03016	Pseudouridine synthase, RluA family
PAMIAFPB_04602	6.63e-232	-	-	-	S	-	-	-	Fimbrillin-like
PAMIAFPB_04603	1.97e-311	mepA_7	-	-	V	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_04604	6.64e-56	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04605	3.54e-67	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04606	0.0	trkH	-	-	P	ko:K03498	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_04607	2.38e-168	-	-	-	S	-	-	-	Oxidoreductase, short chain dehydrogenase reductase family protein
PAMIAFPB_04608	4.6e-62	-	-	-	S	-	-	-	COG NOG23408 non supervised orthologous group
PAMIAFPB_04609	5.53e-60	-	-	-	S	ko:K06975	-	ko00000	GCN5-related N-acetyl-transferase
PAMIAFPB_04610	0.0	-	-	-	M	ko:K07071	-	ko00000	Domain of unknown function (DUF1731)
PAMIAFPB_04611	0.0	-	-	-	NU	-	-	-	Type IV pilus biogenesis stability protein PilW
PAMIAFPB_04612	3.03e-83	-	-	-	-	-	-	-	-
PAMIAFPB_04613	2.57e-139	-	-	-	S	-	-	-	Domain of unknown function (DUF5025)
PAMIAFPB_04614	0.0	-	-	-	-	-	-	-	-
PAMIAFPB_04616	1.64e-202	-	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Formamidopyrimidine-DNA glycosylase H2TH domain
PAMIAFPB_04617	5.69e-242	mltD_2	-	-	M	-	-	-	Transglycosylase SLT domain protein
PAMIAFPB_04618	4.82e-197	-	-	-	J	ko:K10716	-	ko00000,ko02000	Transporter, cation channel family protein
PAMIAFPB_04619	1.95e-78	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
PAMIAFPB_04620	3.22e-142	mgtC	-	-	S	ko:K07507	-	ko00000,ko02000	Mg2 transporter-C family protein
PAMIAFPB_04621	3.86e-190	-	-	-	L	-	-	-	DNA metabolism protein
PAMIAFPB_04622	2.4e-312	-	-	-	S	-	-	-	DNA-binding protein with the Helix-hairpin-helix motif
PAMIAFPB_04624	7.94e-250	-	-	-	M	-	-	-	COG2885 Outer membrane protein and related peptidoglycan-associated
PAMIAFPB_04625	0.0	-	-	-	N	-	-	-	bacterial-type flagellum assembly
PAMIAFPB_04626	8.09e-156	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
PAMIAFPB_04628	1.62e-28	-	-	-	S	-	-	-	COG NOG16623 non supervised orthologous group
PAMIAFPB_04629	1.63e-152	-	-	-	K	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04630	0.0	agcS	-	-	E	ko:K03310	-	ko00000	amino acid carrier protein
PAMIAFPB_04631	2.52e-149	-	-	-	S	-	-	-	COG NOG25304 non supervised orthologous group
PAMIAFPB_04632	0.0	eam	5.4.3.2	-	E	ko:K01843	ko00310,map00310	ko00000,ko00001,ko01000	KamA family
PAMIAFPB_04633	2.41e-297	pbuX	-	-	F	ko:K16345	-	ko00000,ko02000	xanthine permease
PAMIAFPB_04634	8.76e-176	-	-	-	S	-	-	-	COG NOG09956 non supervised orthologous group
PAMIAFPB_04635	0.0	-	-	-	S	-	-	-	COG NOG26858 non supervised orthologous group
PAMIAFPB_04636	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_04637	1.02e-133	mug	-	-	L	-	-	-	COG3663 G T U mismatch-specific DNA glycosylase
PAMIAFPB_04638	3.69e-81	-	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	Belongs to the ArsC family
PAMIAFPB_04640	0.0	-	-	-	S	ko:K07114	-	ko00000,ko02000	Von Willebrand factor type A domain protein
PAMIAFPB_04641	8.26e-126	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PAMIAFPB_04642	1.74e-269	-	-	-	M	-	-	-	Carboxypeptidase regulatory-like domain
PAMIAFPB_04643	2.33e-283	-	-	-	S	ko:K07148	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_04644	3.34e-212	pdxK	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Pyridoxal kinase
PAMIAFPB_04645	4.75e-132	lutC	-	-	S	ko:K00782	-	ko00000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04646	0.0	-	-	-	C	ko:K18929	-	ko00000	electron transport protein YkgF
PAMIAFPB_04647	5.69e-182	-	-	-	C	ko:K18928	-	ko00000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04648	4.48e-136	queE	4.3.99.3	-	H	ko:K10026	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
PAMIAFPB_04649	3.33e-85	queD	4.1.2.50, 4.2.3.12	-	H	ko:K01737	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000,ko03016	Psort location Cytoplasmic, score
PAMIAFPB_04650	4.82e-78	-	-	-	S	ko:K09790	-	ko00000	Psort location CytoplasmicMembrane, score
PAMIAFPB_04651	2.47e-136	mtnN	3.2.2.9	-	F	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04652	2.34e-305	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_04653	2.17e-268	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04654	0.0	-	-	-	S	-	-	-	Tat pathway signal sequence domain protein
PAMIAFPB_04655	1.87e-218	-	-	-	G	-	-	-	COG NOG16664 non supervised orthologous group
PAMIAFPB_04656	8.82e-214	-	-	-	M	-	-	-	COG COG1082 Sugar phosphate isomerases epimerases
PAMIAFPB_04657	9.35e-84	-	-	-	S	-	-	-	Thiol-activated cytolysin
PAMIAFPB_04659	1.71e-91	-	-	-	L	-	-	-	Bacterial DNA-binding protein
PAMIAFPB_04660	0.0	-	-	-	JKL	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04661	0.0	ccmC	-	-	O	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_04662	1.17e-267	-	-	-	J	-	-	-	endoribonuclease L-PSP
PAMIAFPB_04663	2.29e-222	-	-	-	S	-	-	-	unsaturated rhamnogalacturonyl hydrolase activity
PAMIAFPB_04664	0.0	-	-	-	C	-	-	-	cytochrome c peroxidase
PAMIAFPB_04665	0.0	-	-	-	U	-	-	-	Involved in the tonB-independent uptake of proteins
PAMIAFPB_04666	2.12e-164	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PAMIAFPB_04667	3.5e-248	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
PAMIAFPB_04668	0.0	xylB	2.7.1.17	-	G	ko:K00854	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Carbohydrate kinase, FGGY family protein
PAMIAFPB_04669	3.02e-116	-	-	-	-	-	-	-	-
PAMIAFPB_04670	7.25e-93	-	-	-	-	-	-	-	-
PAMIAFPB_04671	3.02e-252	-	-	-	G	-	-	-	SMP-30/Gluconolaconase/LRE-like region
PAMIAFPB_04672	6.13e-59	-	-	-	S	-	-	-	COG NOG23407 non supervised orthologous group
PAMIAFPB_04673	2.47e-58	-	-	-	D	ko:K09888	-	ko00000,ko03036	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PAMIAFPB_04674	0.0	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
PAMIAFPB_04675	1.5e-174	cutC	-	-	P	ko:K06201	-	ko00000	Participates in the control of copper homeostasis
PAMIAFPB_04676	5.24e-278	madB	4.1.1.3	-	C	ko:K01572	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000,ko02000	COG COG1883 Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
PAMIAFPB_04677	5.44e-88	-	-	-	S	-	-	-	COG NOG30410 non supervised orthologous group
PAMIAFPB_04678	1.61e-102	-	-	-	-	-	-	-	-
PAMIAFPB_04679	0.0	-	-	-	E	-	-	-	Transglutaminase-like protein
PAMIAFPB_04680	6.18e-23	-	-	-	-	-	-	-	-
PAMIAFPB_04681	5.88e-164	-	-	-	S	-	-	-	Domain of unknown function (DUF4627)
PAMIAFPB_04682	0.0	-	-	-	S	-	-	-	COG NOG25375 non supervised orthologous group
PAMIAFPB_04683	2.29e-253	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PAMIAFPB_04685	7.15e-294	-	-	-	T	-	-	-	COG NOG26059 non supervised orthologous group
PAMIAFPB_04686	0.0	-	-	-	H	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_04687	2.19e-199	-	-	-	P	ko:K21572	-	ko00000,ko02000	non supervised orthologous group
PAMIAFPB_04688	1.22e-104	-	-	-	S	-	-	-	Domain of unknown function (DUF5126)
PAMIAFPB_04689	1.92e-40	-	-	-	S	-	-	-	Domain of unknown function
PAMIAFPB_04690	1.59e-232	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	Alpha-L-fucosidase
PAMIAFPB_04691	2.23e-56	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	Alpha-L-fucosidase
PAMIAFPB_04692	7.51e-252	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
PAMIAFPB_04693	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
PAMIAFPB_04694	3.9e-287	-	-	-	Q	-	-	-	Concanavalin A-like lectin/glucanases superfamily
PAMIAFPB_04695	1.92e-287	-	-	-	G	-	-	-	Putative glycoside hydrolase Family 18, chitinase_18
PAMIAFPB_04696	0.0	-	-	-	S	-	-	-	COG NOG26858 non supervised orthologous group
PAMIAFPB_04697	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_04699	2.13e-230	-	-	-	PT	-	-	-	Domain of unknown function (DUF4974)
PAMIAFPB_04700	7.67e-124	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
PAMIAFPB_04704	3.5e-70	-	-	-	S	-	-	-	COG NOG19145 non supervised orthologous group
PAMIAFPB_04705	6.4e-282	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	COG2706 3-carboxymuconate cyclase
PAMIAFPB_04706	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
PAMIAFPB_04707	0.0	xylE	-	-	P	ko:K02100,ko:K03444,ko:K08138	-	ko00000,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PAMIAFPB_04708	2.89e-220	-	-	-	K	-	-	-	AraC-like ligand binding domain
PAMIAFPB_04709	0.0	-	3.2.1.35	-	G	ko:K01197	ko00531,ko01100,map00531,map01100	ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042	beta-N-acetylglucosaminidase
PAMIAFPB_04710	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain
PAMIAFPB_04711	2.07e-149	nlpD_2	-	-	M	-	-	-	COG COG0739 Membrane proteins related to metalloendopeptidases
PAMIAFPB_04712	1.98e-156	-	-	-	S	-	-	-	B3 4 domain protein
PAMIAFPB_04713	3.03e-98	-	-	-	S	ko:K05810	-	ko00000,ko01000	Belongs to the multicopper oxidase YfiH RL5 family
PAMIAFPB_04714	4.22e-41	-	-	-	-	-	-	-	-
PAMIAFPB_04715	6.56e-48	-	-	-	S	-	-	-	COG NOG33922 non supervised orthologous group
PAMIAFPB_04716	4.17e-97	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04717	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04718	6.23e-56	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04719	7.72e-51	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04720	1.29e-53	-	-	-	-	-	-	-	-
PAMIAFPB_04721	1.9e-68	-	-	-	-	-	-	-	-
PAMIAFPB_04722	3.18e-50	-	-	-	S	-	-	-	Psort location Cytoplasmic, score
PAMIAFPB_04723	5.93e-124	-	3.2.1.17	-	S	ko:K01185	-	ko00000,ko01000	lysozyme
PAMIAFPB_04724	2.01e-118	-	-	-	S	-	-	-	COG NOG28378 non supervised orthologous group
PAMIAFPB_04725	6.05e-220	-	-	-	L	-	-	-	CHC2 zinc finger domain protein
PAMIAFPB_04726	1.95e-139	-	-	-	S	-	-	-	COG NOG19079 non supervised orthologous group
PAMIAFPB_04727	9.5e-238	-	-	-	U	-	-	-	Conjugative transposon TraN protein
PAMIAFPB_04728	1.27e-306	traM	-	-	S	-	-	-	Conjugative transposon TraM protein
PAMIAFPB_04729	4.7e-63	-	-	-	S	-	-	-	Protein of unknown function (DUF3989)
PAMIAFPB_04730	2.51e-143	-	-	-	U	-	-	-	Conjugative transposon TraK protein
PAMIAFPB_04731	4.77e-225	traJ	-	-	S	-	-	-	Conjugative transposon TraJ protein
PAMIAFPB_04732	1.76e-122	-	-	-	U	-	-	-	COG NOG09946 non supervised orthologous group
PAMIAFPB_04733	0.0	-	-	-	L	-	-	-	COG COG3344 Retron-type reverse transcriptase
PAMIAFPB_04735	1.92e-42	-	-	-	U	-	-	-	COG NOG09946 non supervised orthologous group
PAMIAFPB_04736	2.82e-87	-	-	-	S	-	-	-	COG NOG30362 non supervised orthologous group
PAMIAFPB_04737	0.0	-	-	-	U	-	-	-	conjugation system ATPase, TraG family
PAMIAFPB_04738	7.4e-71	-	-	-	S	-	-	-	Conjugative transposon protein TraF
PAMIAFPB_04739	2.18e-63	-	-	-	S	-	-	-	Conjugative transposon protein TraE
PAMIAFPB_04740	2.02e-163	-	-	-	S	-	-	-	Conjugal transfer protein traD
PAMIAFPB_04741	5e-78	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04742	7.32e-95	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04743	5.35e-179	-	-	-	D	-	-	-	COG NOG26689 non supervised orthologous group
PAMIAFPB_04744	6.34e-94	-	-	-	-	-	-	-	-
PAMIAFPB_04745	5.69e-299	-	-	-	U	-	-	-	Relaxase mobilization nuclease domain protein
PAMIAFPB_04746	0.0	-	-	-	U	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_04747	4.21e-305	-	-	-	S	-	-	-	P-loop domain protein
PAMIAFPB_04748	0.0	-	-	-	L	-	-	-	COGs COG4584 Transposase and inactivated derivatives
PAMIAFPB_04749	7.14e-184	-	-	-	L	-	-	-	SMART ATPase, AAA type, core
PAMIAFPB_04750	0.0	-	-	-	S	-	-	-	KAP family P-loop domain
PAMIAFPB_04751	3.35e-269	-	-	-	S	ko:K07133	-	ko00000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04752	6.37e-140	rteC	-	-	S	-	-	-	RteC protein
PAMIAFPB_04753	1.83e-101	-	-	-	H	-	-	-	dihydrofolate reductase family protein K00287
PAMIAFPB_04754	0.0	zraR	-	-	T	ko:K07713	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Sigma-54 interaction domain protein
PAMIAFPB_04755	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_04756	0.0	tetP	-	-	J	ko:K18220	-	br01600,ko00000,ko01504	Elongation Factor G, domain II
PAMIAFPB_04757	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
PAMIAFPB_04758	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
PAMIAFPB_04759	1.11e-101	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04760	0.0	-	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	DNA topoisomerase
PAMIAFPB_04761	0.0	-	-	-	S	-	-	-	COG NOG09947 non supervised orthologous group
PAMIAFPB_04762	9.92e-104	-	-	-	-	-	-	-	-
PAMIAFPB_04763	4.95e-76	-	-	-	S	-	-	-	DNA binding domain, excisionase family
PAMIAFPB_04764	3.71e-63	-	-	-	S	-	-	-	Helix-turn-helix domain
PAMIAFPB_04765	7e-60	-	-	-	S	-	-	-	DNA binding domain, excisionase family
PAMIAFPB_04766	2.78e-82	-	-	-	S	-	-	-	COG3943, virulence protein
PAMIAFPB_04767	2.34e-305	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_04768	2.98e-66	-	-	-	S	ko:K05810	-	ko00000,ko01000	Belongs to the multicopper oxidase YfiH RL5 family
PAMIAFPB_04769	1.73e-268	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PAMIAFPB_04770	2.46e-132	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PAMIAFPB_04771	1.69e-120	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
PAMIAFPB_04772	0.0	-	-	-	P	ko:K03305	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_04773	2.87e-47	-	-	-	S	-	-	-	Winged helix-turn-helix domain (DUF2582)
PAMIAFPB_04775	0.0	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PAMIAFPB_04776	1.32e-248	-	-	-	S	-	-	-	COG NOG25792 non supervised orthologous group
PAMIAFPB_04777	7.12e-62	-	-	-	-	-	-	-	-
PAMIAFPB_04778	1.07e-79	pqqD	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04779	0.0	-	-	-	G	-	-	-	Transporter, major facilitator family protein
PAMIAFPB_04780	4.32e-64	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase SecG subunit
PAMIAFPB_04781	2.52e-169	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04782	1.57e-119	lptE	-	-	S	-	-	-	COG NOG14471 non supervised orthologous group
PAMIAFPB_04783	3.37e-290	fhlA	-	-	K	-	-	-	Sigma-54 interaction domain protein
PAMIAFPB_04784	3.32e-263	pdxA	1.1.1.262	-	C	ko:K00097	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the PdxA family
PAMIAFPB_04785	1.95e-250	-	-	-	L	-	-	-	COG NOG11654 non supervised orthologous group
PAMIAFPB_04786	3.11e-247	rlmN	2.1.1.192	-	J	ko:K06941	-	ko00000,ko01000,ko03009	Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PAMIAFPB_04787	0.0	ppiD	5.2.1.8	-	O	ko:K01802,ko:K03770	-	ko00000,ko01000,ko03110	COG NOG26630 non supervised orthologous group
PAMIAFPB_04788	2.88e-289	tlyC	-	-	S	ko:K03699	-	ko00000,ko02042	Psort location CytoplasmicMembrane, score
PAMIAFPB_04789	4.89e-129	-	-	-	S	-	-	-	Lipopolysaccharide-assembly, LptC-related
PAMIAFPB_04790	2.51e-311	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
PAMIAFPB_04791	0.0	-	-	-	I	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_04792	4.24e-162	coaX	2.7.1.33	-	F	ko:K03525	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PAMIAFPB_04793	6.83e-274	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_04794	0.0	pafA	-	-	P	-	-	-	type I phosphodiesterase nucleotide pyrophosphatase
PAMIAFPB_04795	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PAMIAFPB_04796	7.26e-265	-	-	-	S	-	-	-	COG NOG26558 non supervised orthologous group
PAMIAFPB_04797	3.75e-98	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04798	0.0	-	3.2.1.50	-	G	ko:K01205	ko00531,ko01100,ko04142,map00531,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko04147	Alpha-N-acetylglucosaminidase
PAMIAFPB_04800	0.0	-	-	-	E	-	-	-	Pfam:SusD
PAMIAFPB_04801	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_04802	5.32e-242	-	-	-	PT	-	-	-	Sigma factor regulatory protein, FecR PupR family
PAMIAFPB_04803	1.79e-126	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
PAMIAFPB_04804	0.0	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMIAFPB_04805	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PAMIAFPB_04806	1.7e-148	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
PAMIAFPB_04807	3.71e-262	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_04808	2.71e-188	mazG	3.6.1.66	-	S	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04809	1.76e-104	-	-	-	S	-	-	-	COG NOG28735 non supervised orthologous group
PAMIAFPB_04810	1.02e-81	-	-	-	S	-	-	-	COG NOG23405 non supervised orthologous group
PAMIAFPB_04811	5.62e-126	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PAMIAFPB_04812	3.68e-233	rnz	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PAMIAFPB_04813	0.0	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence
PAMIAFPB_04814	0.0	recD2_4	-	-	L	-	-	-	COG COG1112 Superfamily I DNA and RNA helicases and helicase subunits
PAMIAFPB_04815	2.48e-276	-	-	-	L	-	-	-	Reverse transcriptase (RNA-dependent DNA polymerase)
PAMIAFPB_04816	0.0	-	-	-	S	-	-	-	COG NOG25960 non supervised orthologous group
PAMIAFPB_04817	1.27e-97	-	-	-	-	-	-	-	-
PAMIAFPB_04818	0.0	glnA	6.3.1.2	-	S	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	Glutamate--ammonia ligase, catalytic domain protein
PAMIAFPB_04819	3.9e-154	-	-	-	K	ko:K21556	-	ko00000,ko03000	- catabolite gene activator and regulatory subunit of cAMP-dependent protein
PAMIAFPB_04820	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain
PAMIAFPB_04821	3.68e-229	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PAMIAFPB_04822	4.14e-146	lolA	-	-	M	ko:K03634	-	ko00000	COG NOG19151 non supervised orthologous group
PAMIAFPB_04823	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	COG1674 DNA segregation ATPase FtsK SpoIIIE and related
PAMIAFPB_04824	4.17e-132	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04825	1.69e-150	rnd	-	-	L	-	-	-	3'-5' exonuclease
PAMIAFPB_04826	4.98e-295	rlmI	2.1.1.191	-	J	ko:K06969	-	ko00000,ko01000,ko03009	SAM-dependent
PAMIAFPB_04827	8.27e-297	nupG	-	-	G	ko:K03289,ko:K11537	-	ko00000,ko02000	transport of nucleosides, permease protein K03289
PAMIAFPB_04828	1.64e-130	-	-	-	S	ko:K08999	-	ko00000	Conserved protein
PAMIAFPB_04829	3.05e-170	rsmE	2.1.1.193	-	J	ko:K09761	-	ko00000,ko01000,ko03009	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PAMIAFPB_04830	0.0	-	-	-	S	-	-	-	COG NOG26882 non supervised orthologous group
PAMIAFPB_04831	4.68e-153	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	COG1136 ABC-type antimicrobial peptide transport system ATPase component
PAMIAFPB_04832	1.64e-50	-	-	-	V	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_04833	3.3e-198	-	-	-	V	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_04834	0.0	-	-	-	P	-	-	-	COG NOG29071 non supervised orthologous group
PAMIAFPB_04835	2.47e-222	miaA2	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PAMIAFPB_04836	9.77e-230	-	-	-	I	-	-	-	lipid kinase, YegS Rv2252 BmrU family
PAMIAFPB_04837	2.13e-187	kdsA	2.5.1.55	-	H	ko:K01627	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the KdsA family
PAMIAFPB_04838	0.0	-	-	-	S	ko:K07263	-	ko00000,ko01000,ko01002	Belongs to the peptidase M16 family
PAMIAFPB_04839	0.0	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_04840	2.69e-165	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	COG1131 ABC-type multidrug transport system ATPase component
PAMIAFPB_04841	2.53e-118	mepS	3.4.17.13	-	M	ko:K13694	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family
PAMIAFPB_04842	6.22e-210	-	-	-	S	ko:K09973	-	ko00000	GumN protein
PAMIAFPB_04843	9.86e-153	ppaX	3.1.3.18	-	V	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	HAD hydrolase, family IA, variant 1
PAMIAFPB_04844	1.66e-67	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
PAMIAFPB_04845	1.05e-58	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
PAMIAFPB_04846	6.77e-307	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Psort location Cytoplasmic, score
PAMIAFPB_04847	4.33e-270	gluP	-	-	G	ko:K02429	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_04848	0.0	gltA	1.3.1.1, 1.4.1.13, 1.4.1.14	-	C	ko:K00266,ko:K17722	ko00240,ko00250,ko00410,ko00770,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00240,map00250,map00410,map00770,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 9.97
PAMIAFPB_04849	5.05e-79	panD	4.1.1.11	-	H	ko:K01579	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
PAMIAFPB_04850	9.86e-201	panC	6.3.2.1	-	H	ko:K01918	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
PAMIAFPB_04851	2.42e-199	glgA	2.4.1.21	GT5	G	ko:K00703	ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000,ko01003	Starch synthase, catalytic domain
PAMIAFPB_04852	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4270)
PAMIAFPB_04853	0.0	amyA	3.2.1.1	GH57	G	ko:K07405	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 57 family
PAMIAFPB_04854	0.0	gmhA	2.4.1.346	GT4	M	ko:K13668	-	ko00000,ko01000,ko01003	Glycosyltransferase, group 1 family protein
PAMIAFPB_04855	0.0	-	-	-	G	-	-	-	glycogen debranching enzyme, archaeal type
PAMIAFPB_04856	2.13e-151	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_04857	1.85e-127	marC	-	-	U	ko:K05595	-	ko00000,ko02000	UPF0056 membrane protein
PAMIAFPB_04858	9.46e-159	-	-	-	K	-	-	-	- catabolite gene activator and regulatory subunit of cAMP-dependent protein
PAMIAFPB_04859	0.0	-	-	-	S	-	-	-	NHL repeat
PAMIAFPB_04860	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_04861	0.0	-	-	-	P	-	-	-	SusD family
PAMIAFPB_04862	5.5e-244	-	-	-	S	-	-	-	Domain of unknown function (DUF4361)
PAMIAFPB_04863	0.0	-	-	-	S	-	-	-	Fibronectin type 3 domain
PAMIAFPB_04864	6.51e-154	-	-	-	-	-	-	-	-
PAMIAFPB_04865	0.0	-	-	-	S	-	-	-	P-loop ATPase and inactivated derivatives
PAMIAFPB_04866	7.33e-292	-	-	-	V	-	-	-	HlyD family secretion protein
PAMIAFPB_04867	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter, ATP-binding protein
PAMIAFPB_04869	2.26e-161	-	-	-	-	-	-	-	-
PAMIAFPB_04870	1.06e-129	-	-	-	S	-	-	-	JAB-like toxin 1
PAMIAFPB_04871	5.92e-235	-	-	-	S	-	-	-	Domain of unknown function (DUF5030)
PAMIAFPB_04872	4.6e-74	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
PAMIAFPB_04873	1.53e-291	-	-	-	L	-	-	-	COG COG3385 FOG Transposase and inactivated derivatives
PAMIAFPB_04874	3.64e-149	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
PAMIAFPB_04875	2.48e-294	-	-	-	M	-	-	-	Glycosyl transferases group 1
PAMIAFPB_04876	5.5e-200	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PAMIAFPB_04877	0.0	-	-	-	M	-	-	-	Glycosyl transferases group 1
PAMIAFPB_04878	3.48e-212	-	-	-	S	-	-	-	TIGRFAM methyltransferase FkbM family
PAMIAFPB_04879	1.66e-186	-	-	-	-	-	-	-	-
PAMIAFPB_04880	3.17e-192	-	-	-	-	-	-	-	-
PAMIAFPB_04881	2.21e-17	-	-	-	S	-	-	-	Domain of unknown function (DUF5030)
PAMIAFPB_04882	0.0	-	-	-	S	-	-	-	Erythromycin esterase
PAMIAFPB_04883	1.68e-194	-	-	-	S	-	-	-	Domain of unknown function (DUF5030)
PAMIAFPB_04884	5.98e-158	-	-	-	E	-	-	-	Peptidase M60-like family
PAMIAFPB_04885	0.0	-	-	-	E	-	-	-	Peptidase M60-like family
PAMIAFPB_04886	9.64e-159	-	-	-	-	-	-	-	-
PAMIAFPB_04887	2.01e-297	-	-	-	S	-	-	-	Fibronectin type 3 domain
PAMIAFPB_04888	5.75e-220	-	-	-	S	-	-	-	Domain of unknown function (DUF4361)
PAMIAFPB_04889	0.0	-	-	-	P	-	-	-	SusD family
PAMIAFPB_04890	0.0	-	-	-	P	-	-	-	TonB dependent receptor
PAMIAFPB_04891	0.0	-	-	-	S	-	-	-	NHL repeat
PAMIAFPB_04892	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
PAMIAFPB_04893	3.29e-83	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PAMIAFPB_04894	7.26e-221	gap	1.2.1.12	-	C	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PAMIAFPB_04895	0.0	dcp	3.4.15.5, 3.4.24.70	-	E	ko:K01284,ko:K01414	-	ko00000,ko01000,ko01002	Psort location Cytoplasmic, score
PAMIAFPB_04896	1.58e-116	-	-	-	S	-	-	-	COG NOG30732 non supervised orthologous group
PAMIAFPB_04897	1.31e-103	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	Cytidine and deoxycytidylate deaminase zinc-binding region
PAMIAFPB_04898	0.0	ctp	3.4.21.102	-	M	ko:K03797	-	ko00000,ko01000,ko01002	Belongs to the peptidase S41A family
PAMIAFPB_04899	4.83e-133	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04900	2.25e-201	-	3.1.3.15	-	E	ko:K04486	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	COG COG1387 Histidinol phosphatase and related hydrolases of the PHP family
PAMIAFPB_04901	8.02e-59	-	-	-	S	-	-	-	COG NOG38282 non supervised orthologous group
PAMIAFPB_04902	1.03e-264	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PAMIAFPB_04903	3.46e-144	-	-	-	S	-	-	-	Tetratricopeptide repeat protein
PAMIAFPB_04904	1.13e-118	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PAMIAFPB_04907	6.15e-298	-	-	-	S	-	-	-	hydrolase activity, acting on glycosyl bonds
PAMIAFPB_04908	0.0	-	-	-	M	-	-	-	Alpha-galactosidase. Removes both branched alpha-1,3- linked galactose residues of blood group B antigens and linear alpha-1,3-linked galactose structures
PAMIAFPB_04909	3.66e-121	-	-	-	K	ko:K03088	-	ko00000,ko03021	ECF sigma factor
PAMIAFPB_04910	2.08e-20	-	-	-	PT	-	-	-	COG NOG28383 non supervised orthologous group
PAMIAFPB_04911	1.07e-141	-	-	-	PT	-	-	-	COG NOG28383 non supervised orthologous group
PAMIAFPB_04912	0.0	-	-	-	H	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_04913	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_04914	2.55e-305	-	-	-	S	-	-	-	Domain of unknown function (DUF1735)
PAMIAFPB_04915	0.0	-	-	-	E	-	-	-	COG NOG04153 non supervised orthologous group
PAMIAFPB_04916	0.0	-	-	-	S	-	-	-	Oxidoreductase NAD-binding domain protein
PAMIAFPB_04917	3.88e-211	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_04918	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	COG3250 Beta-galactosidase beta-glucuronidase
PAMIAFPB_04919	1.93e-266	mdsC	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04920	2.7e-147	-	-	-	S	-	-	-	COG NOG19149 non supervised orthologous group
PAMIAFPB_04921	2.25e-210	-	-	-	EG	ko:K08978	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_04922	4.32e-182	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PAMIAFPB_04923	1.52e-290	-	-	-	T	-	-	-	cheY-homologous receiver domain
PAMIAFPB_04924	2.4e-64	-	-	-	T	-	-	-	cheY-homologous receiver domain
PAMIAFPB_04925	0.0	-	-	-	T	-	-	-	cheY-homologous receiver domain
PAMIAFPB_04926	1.39e-142	-	-	-	S	-	-	-	Domain of unknown function (DUF5033)
PAMIAFPB_04927	1.67e-139	-	-	-	M	-	-	-	Protein of unknown function (DUF3575)
PAMIAFPB_04928	0.0	-	-	-	M	-	-	-	COG NOG23378 non supervised orthologous group
PAMIAFPB_04929	8.63e-60	-	-	-	K	-	-	-	Helix-turn-helix domain
PAMIAFPB_04930	3.57e-150	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04931	2.55e-180	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04932	1.05e-36	-	-	-	L	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04933	3.92e-308	-	-	-	S	-	-	-	P-loop ATPase and inactivated derivatives
PAMIAFPB_04934	4.5e-91	-	-	-	S	-	-	-	Major fimbrial subunit protein type IV, Fimbrillin, C-terminal
PAMIAFPB_04935	2.01e-217	-	-	-	S	-	-	-	COG NOG32009 non supervised orthologous group
PAMIAFPB_04936	7.83e-109	-	-	-	-	-	-	-	-
PAMIAFPB_04937	1.16e-202	-	-	-	S	-	-	-	Domain of unknown function (DUF4906)
PAMIAFPB_04939	1.12e-105	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.46
PAMIAFPB_04940	7.76e-238	yqiK	-	-	S	ko:K07192	ko04910,map04910	ko00000,ko00001,ko03036,ko04131,ko04147	SPFH Band 7 PHB domain protein
PAMIAFPB_04941	2.5e-161	-	-	-	S	-	-	-	COG NOG26960 non supervised orthologous group
PAMIAFPB_04942	5.22e-231	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein
PAMIAFPB_04943	7.73e-230	purC	6.3.2.6	-	F	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the SAICAR synthetase family
PAMIAFPB_04944	4.16e-179	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PAMIAFPB_04945	1.15e-182	aroE	1.1.1.25	-	C	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	COG0169 Shikimate 5-dehydrogenase
PAMIAFPB_04946	4.85e-232	-	-	-	S	ko:K06889	-	ko00000	of the alpha beta superfamily
PAMIAFPB_04947	1.19e-201	-	-	-	S	ko:K06872	-	ko00000	COG1512 Beta-propeller domains of methanol dehydrogenase type
PAMIAFPB_04948	1.07e-128	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
PAMIAFPB_04950	3.59e-286	purM	6.3.3.1	-	F	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score
PAMIAFPB_04951	1.07e-262	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PAMIAFPB_04952	1.99e-196	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the OMP decarboxylase family. Type 2 subfamily
PAMIAFPB_04953	9.77e-297	-	-	-	S	ko:K06885	-	ko00000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04954	9.53e-164	lpxD	2.3.1.191	-	M	ko:K02536	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PAMIAFPB_04955	0.0	fabZ	3.5.1.108, 4.2.1.59	-	IM	ko:K16363	ko00061,ko00540,ko01100,ko01212,map00061,map00540,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01005	Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis
PAMIAFPB_04956	8.73e-161	lpxA	2.3.1.129	-	M	ko:K00677	ko00540,ko01100,ko01503,map00540,map01100,map01503	ko00000,ko00001,ko00002,ko01000,ko01005	Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PAMIAFPB_04957	1.95e-122	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04958	1.44e-210	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PAMIAFPB_04959	1.61e-293	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PAMIAFPB_04960	9.33e-76	-	-	-	-	-	-	-	-
PAMIAFPB_04961	0.0	-	-	-	KT	-	-	-	COG NOG25147 non supervised orthologous group
PAMIAFPB_04962	4.32e-146	-	-	-	-	ko:K03646	-	ko00000,ko02000	-
PAMIAFPB_04963	8.58e-82	-	-	-	K	-	-	-	Transcriptional regulator, BlaI MecI CopY family
PAMIAFPB_04964	2.32e-67	-	-	-	-	-	-	-	-
PAMIAFPB_04965	8.97e-38	-	-	-	S	-	-	-	COG NOG17292 non supervised orthologous group
PAMIAFPB_04966	4.02e-212	-	-	-	O	-	-	-	SPFH Band 7 PHB domain protein
PAMIAFPB_04967	0.0	dpp	3.4.14.5	-	EU	ko:K01278	ko04974,map04974	ko00000,ko00001,ko01000,ko01002,ko04090,ko04147	Peptidase, S9A B C family, catalytic domain protein
PAMIAFPB_04968	2.55e-212	lipA	2.8.1.8	-	H	ko:K03644	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
PAMIAFPB_04969	2.84e-264	-	-	-	I	-	-	-	Psort location CytoplasmicMembrane, score
PAMIAFPB_04970	1.98e-167	rsmI_1	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04971	8.23e-247	gldB	-	-	O	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_04972	1.58e-203	fabI	1.3.1.10, 1.3.1.9	-	I	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl- acyl-carrier-protein reductase NADH
PAMIAFPB_04973	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 28 family
PAMIAFPB_04974	2.86e-310	-	-	-	S	-	-	-	unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
PAMIAFPB_04975	0.0	xynB_10	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 43 family
PAMIAFPB_04976	5.27e-154	-	3.1.3.18	-	S	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	HAD hydrolase, family IA, variant
PAMIAFPB_04977	0.0	-	-	-	S	-	-	-	Domain of unknown function
PAMIAFPB_04978	0.0	-	-	-	T	-	-	-	Y_Y_Y domain
PAMIAFPB_04979	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
PAMIAFPB_04980	1.52e-201	-	-	-	E	-	-	-	Carbohydrate esterase, sialic acid-specific acetylesterase
PAMIAFPB_04981	0.0	-	-	-	G	-	-	-	CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238
PAMIAFPB_04982	0.0	-	-	-	T	-	-	-	Response regulator receiver domain
PAMIAFPB_04983	4.22e-74	rhaU	5.1.3.32	-	G	ko:K03534	-	ko00000,ko01000	Involved in the anomeric conversion of L-rhamnose
PAMIAFPB_04984	0.0	yteR_9	-	-	E	-	-	-	Glycosyl Hydrolase Family 88
PAMIAFPB_04985	0.0	-	-	-	G	-	-	-	candidate rhamnogalacturonan lyase, polysaccharide lyase family 11 protein K01238
PAMIAFPB_04986	2.42e-284	yteR_10	-	-	G	-	-	-	unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
PAMIAFPB_04987	0.0	-	-	-	E	-	-	-	GDSL-like protein
PAMIAFPB_04988	0.0	-	-	-	-	-	-	-	-
PAMIAFPB_04989	4.83e-146	-	-	-	-	-	-	-	-
PAMIAFPB_04990	0.0	-	-	-	S	-	-	-	Domain of unknown function
PAMIAFPB_04991	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	PFAM SusD family
PAMIAFPB_04992	0.0	-	-	-	P	-	-	-	TonB dependent receptor
PAMIAFPB_04993	0.0	-	-	-	M	-	-	-	COG2335, Secreted and surface protein containing fasciclin-like repeats
PAMIAFPB_04994	0.0	-	-	-	M	ko:K19519	-	ko00000,ko04516	Domain of unknown function (DUF5108)
PAMIAFPB_04995	0.0	-	-	-	S	ko:K21572	-	ko00000,ko02000	Starch-binding associating with outer membrane
PAMIAFPB_04996	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_04997	0.0	-	-	-	M	-	-	-	Domain of unknown function
PAMIAFPB_04998	0.0	-	-	-	S	-	-	-	Domain of unknonw function from B. Theta Gene description (DUF3874)
PAMIAFPB_04999	6.72e-140	-	-	-	L	-	-	-	DNA-binding protein
PAMIAFPB_05000	0.0	-	-	-	G	-	-	-	Glycosyl hydrolases family 35
PAMIAFPB_05001	0.0	-	-	-	G	-	-	-	beta-fructofuranosidase activity
PAMIAFPB_05002	4.66e-140	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
PAMIAFPB_05003	9.1e-171	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
PAMIAFPB_05004	0.0	-	-	-	G	-	-	-	alpha-galactosidase
PAMIAFPB_05005	0.0	-	-	-	G	-	-	-	beta-galactosidase
PAMIAFPB_05006	6.98e-272	-	-	-	G	-	-	-	beta-galactosidase
PAMIAFPB_05007	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
PAMIAFPB_05008	3.97e-176	-	4.2.2.23	PL11	S	ko:K18197	-	ko00000,ko01000	candidate rhamnogalacturonan lyase, polysaccharide lyase family 11 protein K01238
PAMIAFPB_05009	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 28 family
PAMIAFPB_05010	2.32e-235	-	-	-	G	-	-	-	CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238
PAMIAFPB_05011	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 28 family
PAMIAFPB_05012	0.0	-	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	Beta-galactosidase trimerisation domain
PAMIAFPB_05014	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 2 family
PAMIAFPB_05015	3.11e-309	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
PAMIAFPB_05016	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 28 family
PAMIAFPB_05017	1.17e-138	-	-	-	G	-	-	-	Domain of unknown function (DUF4450)
PAMIAFPB_05018	0.0	-	-	-	M	-	-	-	Right handed beta helix region
PAMIAFPB_05019	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 2, sugar binding domain protein
PAMIAFPB_05020	6.91e-164	-	-	-	C	-	-	-	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PAMIAFPB_05021	4.86e-282	-	-	-	K	ko:K13652	-	ko00000,ko03000	Bacterial transcription activator, effector binding domain
PAMIAFPB_05023	0.0	topB	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	COG0550 Topoisomerase IA
PAMIAFPB_05024	3.66e-100	-	-	-	G	-	-	-	Glycosyl hydrolases family 18
PAMIAFPB_05025	9.37e-225	-	-	-	G	-	-	-	Concanavalin A-like lectin/glucanases superfamily
PAMIAFPB_05026	2.39e-126	-	-	-	G	-	-	-	Putative glycoside hydrolase Family 18, chitinase_18
PAMIAFPB_05027	3.61e-187	-	-	-	S	-	-	-	Susd and RagB outer membrane lipoprotein
PAMIAFPB_05028	2.87e-135	-	-	-	S	-	-	-	Susd and RagB outer membrane lipoprotein
PAMIAFPB_05029	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_05030	2.79e-187	-	-	-	PT	-	-	-	Sigma factor regulatory protein, FecR PupR family
PAMIAFPB_05031	3.04e-105	rpoE3	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma-70 factor
PAMIAFPB_05032	0.0	mutB	5.4.99.2	-	I	ko:K01847	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_05033	0.0	mutA	5.4.99.2	-	I	ko:K01847	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	methylmalonyl-CoA mutase small subunit
PAMIAFPB_05034	0.0	-	-	-	P	ko:K07085	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_05035	6.68e-150	-	-	-	F	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_05036	0.0	-	-	-	H	ko:K02014	-	ko00000,ko02000	COG COG4206 Outer membrane cobalamin receptor protein
PAMIAFPB_05037	2.14e-259	-	-	-	S	-	-	-	COG NOG25284 non supervised orthologous group
PAMIAFPB_05038	9.28e-136	-	-	-	S	-	-	-	non supervised orthologous group
PAMIAFPB_05039	3.47e-35	-	-	-	-	-	-	-	-
PAMIAFPB_05041	1.42e-267	-	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component
PAMIAFPB_05042	7.09e-213	btuC	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PAMIAFPB_05043	5.44e-178	-	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components
PAMIAFPB_05044	0.0	-	-	-	V	-	-	-	COG0534 Na -driven multidrug efflux pump
PAMIAFPB_05045	4.44e-134	-	-	-	T	-	-	-	Cyclic nucleotide-monophosphate binding domain
PAMIAFPB_05046	1.5e-176	yvoA	-	-	K	ko:K03710	-	ko00000,ko03000	UbiC transcription regulator-associated domain protein
PAMIAFPB_05047	0.0	-	-	-	G	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_05048	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
PAMIAFPB_05049	2.67e-271	-	-	-	G	-	-	-	Transporter, major facilitator family protein
PAMIAFPB_05050	5.1e-247	-	-	-	H	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_05051	0.0	-	-	-	H	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_05052	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	non supervised orthologous group
PAMIAFPB_05053	7.18e-303	-	-	-	S	-	-	-	Domain of unknown function (DUF5126)
PAMIAFPB_05054	6.69e-304	-	-	-	S	-	-	-	Domain of unknown function
PAMIAFPB_05055	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
PAMIAFPB_05056	2.73e-98	-	-	-	G	-	-	-	Glycosyl hydrolase family 92
PAMIAFPB_05057	8.47e-270	-	-	-	G	-	-	-	Glycosyl hydrolases family 43
PAMIAFPB_05058	0.0	-	-	-	G	-	-	-	COG COG0383 Alpha-mannosidase
PAMIAFPB_05059	1.68e-180	-	-	-	-	-	-	-	-
PAMIAFPB_05060	3.96e-126	-	-	-	K	-	-	-	-acetyltransferase
PAMIAFPB_05061	5.25e-15	-	-	-	-	-	-	-	-
PAMIAFPB_05062	1.83e-316	-	-	-	MU	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_05063	0.0	-	-	-	V	-	-	-	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMIAFPB_05064	1.01e-253	-	-	-	M	-	-	-	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMIAFPB_05065	1.19e-205	-	-	-	K	-	-	-	transcriptional regulator (AraC family)
PAMIAFPB_05066	2.77e-315	-	-	-	V	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_05067	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
PAMIAFPB_05068	1.38e-250	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
PAMIAFPB_05069	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
PAMIAFPB_05070	9.87e-112	-	-	-	S	-	-	-	Domain of unknown function (DUF5035)
PAMIAFPB_05071	3.96e-184	-	-	-	-	-	-	-	-
PAMIAFPB_05072	3.16e-159	yfbT	-	-	S	-	-	-	HAD hydrolase, family IA, variant 3
PAMIAFPB_05073	0.0	fkp	-	-	S	-	-	-	GHMP kinase, N-terminal domain protein
PAMIAFPB_05075	6.35e-256	asnA	6.3.1.1	-	E	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 10.00
PAMIAFPB_05076	7.52e-165	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PAMIAFPB_05080	3.02e-172	-	-	-	L	-	-	-	ISXO2-like transposase domain
PAMIAFPB_05084	2.98e-135	-	-	-	T	-	-	-	cyclic nucleotide binding
PAMIAFPB_05085	0.0	-	-	-	M	-	-	-	Psort location OuterMembrane, score 9.49
PAMIAFPB_05086	3.42e-129	-	-	-	H	ko:K06950	-	ko00000	Psort location Cytoplasmic, score 8.96
PAMIAFPB_05087	1.16e-286	-	-	-	S	-	-	-	protein conserved in bacteria
PAMIAFPB_05088	0.0	-	-	-	S	-	-	-	Purple acid Phosphatase, N-terminal domain
PAMIAFPB_05089	9.01e-263	-	-	-	S	-	-	-	Protein of unknown function (DUF1016)
PAMIAFPB_05090	1.65e-211	-	-	-	S	ko:K03453	-	ko00000	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_05091	1.39e-297	amiA	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	N-acetylmuramoyl-L-alanine amidase
PAMIAFPB_05092	1.18e-195	-	-	-	Q	ko:K02067	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component
PAMIAFPB_05093	0.0	-	-	-	P	-	-	-	Psort location OuterMembrane, score
PAMIAFPB_05094	0.0	-	-	-	H	-	-	-	Susd and RagB outer membrane lipoprotein
PAMIAFPB_05095	2.51e-168	-	-	-	S	-	-	-	Domain of unknown function (DUF5012)
PAMIAFPB_05096	7.91e-120	-	-	-	S	-	-	-	Lipid-binding putative hydrolase
PAMIAFPB_05097	1.7e-36	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_05098	1.45e-280	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAMIAFPB_05100	1.07e-36	-	-	-	-	-	-	-	-
PAMIAFPB_05102	6.99e-32	-	-	-	-	-	-	-	-
PAMIAFPB_05104	1.23e-118	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
PAMIAFPB_05106	1.66e-26	-	-	-	-	-	-	-	-
PAMIAFPB_05107	3.58e-39	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_05108	2.17e-192	-	-	-	S	-	-	-	Protein of unknown function (DUF935)
PAMIAFPB_05110	4.48e-172	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PAMIAFPB_05111	3.02e-26	-	-	-	-	-	-	-	-
PAMIAFPB_05112	3.44e-65	clpP	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	serine-type endopeptidase activity
PAMIAFPB_05113	1.94e-109	-	-	-	-	-	-	-	-
PAMIAFPB_05114	2.25e-116	-	-	-	-	-	-	-	-
PAMIAFPB_05115	1.44e-55	-	-	-	-	-	-	-	-
PAMIAFPB_05117	9.83e-72	-	-	-	S	-	-	-	Phage tail tape measure protein, TP901 family
PAMIAFPB_05119	4.71e-61	-	-	-	S	-	-	-	Late control gene D protein
PAMIAFPB_05120	5.33e-24	-	-	-	-	-	-	-	-
PAMIAFPB_05121	3.14e-15	-	-	-	-	-	-	-	-
PAMIAFPB_05123	6.38e-25	-	-	-	-	-	-	-	-
PAMIAFPB_05124	8.45e-101	-	3.5.1.28	-	V	ko:K01447	-	ko00000,ko01000	N-acetylmuramoyl-L-alanine amidase
PAMIAFPB_05127	1.46e-102	-	-	-	-	-	-	-	-
PAMIAFPB_05131	2.3e-189	-	-	-	-	-	-	-	-
PAMIAFPB_05132	1.99e-133	-	-	-	-	-	-	-	-
PAMIAFPB_05133	2.74e-119	-	-	-	S	-	-	-	Protein of unknown function (DUF1566)
PAMIAFPB_05135	1.15e-216	-	-	-	L	-	-	-	COG COG3344 Retron-type reverse transcriptase
PAMIAFPB_05137	2.17e-313	-	-	-	L	-	-	-	COG COG3666 Transposase and inactivated derivatives
PAMIAFPB_05138	0.0	-	3.2.1.50	-	G	ko:K01205	ko00531,ko01100,ko04142,map00531,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko04147	Alpha-N-acetylglucosaminidase
PAMIAFPB_05139	0.0	-	-	-	P	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_05140	0.0	-	-	-	F	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_05141	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF5018)
PAMIAFPB_05142	0.0	-	-	-	S	-	-	-	Domain of unknown function
PAMIAFPB_05143	0.0	-	-	-	S	-	-	-	C terminal of Calcineurin-like phosphoesterase
PAMIAFPB_05144	0.0	-	3.1.1.53	-	G	ko:K05970	-	ko00000,ko01000	COG NOG04984 non supervised orthologous group
PAMIAFPB_05145	0.0	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 10.00
PAMIAFPB_05147	4.78e-273	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
PAMIAFPB_05148	2.19e-309	-	-	-	-	-	-	-	-
PAMIAFPB_05149	5.34e-64	bglB	3.2.1.21	GH3	G	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 3 family
PAMIAFPB_05151	0.0	-	-	-	C	-	-	-	Domain of unknown function (DUF4855)
PAMIAFPB_05152	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF1735)
PAMIAFPB_05153	0.0	-	-	-	P	ko:K21572	-	ko00000,ko02000	SusD family
PAMIAFPB_05154	0.0	-	-	-	H	-	-	-	TonB-linked outer membrane protein, SusC RagA family
PAMIAFPB_05155	1.8e-161	-	3.2.1.50	-	G	ko:K01205	ko00531,ko01100,ko04142,map00531,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko04147	Alpha-N-acetylglucosaminidase
PAMIAFPB_05157	5.93e-91	-	-	-	K	-	-	-	Peptidase S24-like
PAMIAFPB_05162	6.14e-263	-	-	-	L	-	-	-	Transposase and inactivated derivatives
PAMIAFPB_05163	3.59e-148	-	3.6.1.3	-	S	ko:K07132	-	ko00000,ko01000	AAA domain
PAMIAFPB_05164	4.17e-69	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PAMIAFPB_05165	1.65e-05	-	-	-	-	-	-	-	-
PAMIAFPB_05167	5.31e-94	-	-	-	S	-	-	-	Protein of unknown function (DUF3164)
PAMIAFPB_05168	5.57e-75	-	-	-	G	-	-	-	UMP catabolic process