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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
PAKDJCJJ_00001	9.77e-152	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
PAKDJCJJ_00002	1.71e-218	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
PAKDJCJJ_00003	1.53e-184	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
PAKDJCJJ_00004	3.85e-120	mreD	-	-	M	ko:K03571	-	ko00000,ko03036	rod shape-determining protein MreD
PAKDJCJJ_00005	2.04e-150	minC	-	-	D	ko:K03610	-	ko00000,ko03036,ko04812	Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
PAKDJCJJ_00006	1.57e-190	minD	-	-	D	ko:K03609	-	ko00000,ko03036,ko04812	Belongs to the ParA family
PAKDJCJJ_00007	5.65e-143	-	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter permease
PAKDJCJJ_00008	8.68e-121	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PAKDJCJJ_00009	1.85e-204	aatB	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
PAKDJCJJ_00010	7.24e-301	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
PAKDJCJJ_00011	1.97e-313	ymfH	-	-	S	-	-	-	Peptidase M16
PAKDJCJJ_00012	2.34e-151	ymfM	-	-	S	ko:K15539	-	ko00000	Domain of unknown function (DUF4115)
PAKDJCJJ_00013	5.53e-132	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PAKDJCJJ_00014	3e-290	cinA	3.5.1.42	-	S	ko:K03742,ko:K03743	ko00760,map00760	ko00000,ko00001,ko01000	Belongs to the CinA family
PAKDJCJJ_00015	3.34e-249	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PAKDJCJJ_00016	9.07e-69	-	-	-	L	ko:K07487	-	ko00000	Transposase
PAKDJCJJ_00017	8.34e-70	-	-	-	L	-	-	-	recombinase activity
PAKDJCJJ_00018	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PAKDJCJJ_00019	2.35e-92	yxeA	-	-	S	-	-	-	Protein of unknown function (DUF1093)
PAKDJCJJ_00020	4.32e-204	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PAKDJCJJ_00021	3.93e-59	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
PAKDJCJJ_00022	5.03e-181	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PAKDJCJJ_00023	8.56e-119	-	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
PAKDJCJJ_00024	1.03e-88	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
PAKDJCJJ_00025	1.45e-258	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PAKDJCJJ_00026	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PAKDJCJJ_00027	3.09e-266	mltG	-	-	S	ko:K07082	-	ko00000	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PAKDJCJJ_00028	5.67e-155	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Cytidine monophosphokinase
PAKDJCJJ_00029	6.68e-93	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PAKDJCJJ_00030	8.94e-75	yneR	-	-	S	-	-	-	Belongs to the HesB IscA family
PAKDJCJJ_00031	0.0	-	-	-	S	-	-	-	membrane
PAKDJCJJ_00032	5.88e-38	-	-	-	S	ko:K09779	-	ko00000	Domain of unknown function (DUF378)
PAKDJCJJ_00033	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
PAKDJCJJ_00034	5.33e-30	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
PAKDJCJJ_00035	2.21e-127	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PAKDJCJJ_00036	6.85e-155	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Peptidase, S54 family
PAKDJCJJ_00037	9.85e-49	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
PAKDJCJJ_00038	3.99e-232	glcK	2.7.1.2	-	G	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Glucokinase
PAKDJCJJ_00039	1.11e-92	yqhL	-	-	P	-	-	-	Rhodanese-like protein
PAKDJCJJ_00040	1.23e-32	WQ51_02665	-	-	S	-	-	-	Protein of unknown function (DUF3042)
PAKDJCJJ_00041	2.92e-182	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	phosphodiesterase
PAKDJCJJ_00042	5.17e-220	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PAKDJCJJ_00043	1.1e-85	glnR	-	-	K	ko:K03713,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000,ko03000	Transcriptional regulator
PAKDJCJJ_00044	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
PAKDJCJJ_00045	1.11e-201	-	-	-	-	-	-	-	-
PAKDJCJJ_00046	7.15e-230	-	-	-	-	-	-	-	-
PAKDJCJJ_00047	7.73e-127	-	-	-	S	-	-	-	Protein conserved in bacteria
PAKDJCJJ_00048	8.42e-124	-	-	-	K	-	-	-	Transcriptional regulator
PAKDJCJJ_00049	5.22e-65	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
PAKDJCJJ_00050	7.92e-76	ysxB	-	-	J	ko:K07584	-	ko00000	Cysteine protease Prp
PAKDJCJJ_00051	8.46e-65	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
PAKDJCJJ_00052	7.11e-253	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
PAKDJCJJ_00053	5.18e-128	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PAKDJCJJ_00054	8.9e-96	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
PAKDJCJJ_00055	2.79e-97	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PAKDJCJJ_00056	3.85e-201	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PAKDJCJJ_00057	3.16e-312	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PAKDJCJJ_00058	1.65e-47	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PAKDJCJJ_00059	3.09e-213	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PAKDJCJJ_00060	3.41e-191	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
PAKDJCJJ_00061	9.88e-100	argR2	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
PAKDJCJJ_00062	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
PAKDJCJJ_00064	6.94e-70	-	-	-	-	-	-	-	-
PAKDJCJJ_00065	2.35e-134	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
PAKDJCJJ_00066	2.53e-42	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PAKDJCJJ_00067	9.37e-276	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PAKDJCJJ_00068	1.06e-147	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
PAKDJCJJ_00069	1.23e-190	WQ51_01275	-	-	S	-	-	-	EDD domain protein, DegV family
PAKDJCJJ_00070	1.21e-213	XK27_03630	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
PAKDJCJJ_00071	9.91e-137	ypmS	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2140)
PAKDJCJJ_00072	6.56e-48	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
PAKDJCJJ_00073	7.45e-166	-	-	-	-	-	-	-	-
PAKDJCJJ_00076	9.5e-98	abiGI	-	-	K	-	-	-	Psort location Cytoplasmic, score
PAKDJCJJ_00078	2.42e-203	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PAKDJCJJ_00079	1.45e-174	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PAKDJCJJ_00080	4.76e-215	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
PAKDJCJJ_00081	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PAKDJCJJ_00082	1.33e-43	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
PAKDJCJJ_00083	5.22e-55	-	-	-	-	-	-	-	-
PAKDJCJJ_00084	7.03e-40	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
PAKDJCJJ_00085	4.19e-38	-	-	-	-	-	-	-	-
PAKDJCJJ_00086	2.65e-220	-	-	-	S	-	-	-	NAD:arginine ADP-ribosyltransferase
PAKDJCJJ_00087	1.96e-252	ysdE	-	-	P	-	-	-	Citrate transporter
PAKDJCJJ_00088	1.1e-157	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
PAKDJCJJ_00089	9.67e-83	ribB	3.5.4.25, 4.1.99.12	-	H	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PAKDJCJJ_00090	2.3e-15	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAKDJCJJ_00091	1.81e-43	nrdI	-	-	F	ko:K03647	-	ko00000	Belongs to the NrdI family
PAKDJCJJ_00092	9.85e-190	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PAKDJCJJ_00093	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PAKDJCJJ_00094	0.0	-	-	-	L	-	-	-	Transposase DDE domain
PAKDJCJJ_00095	2.67e-79	pinR1	-	-	L	-	-	-	Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
PAKDJCJJ_00096	8.34e-109	tnpR1	-	-	L	-	-	-	Resolvase, N terminal domain
PAKDJCJJ_00097	2.51e-51	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PAKDJCJJ_00098	9.79e-14	-	-	-	-	-	-	-	-
PAKDJCJJ_00100	3.61e-59	-	-	-	-	-	-	-	-
PAKDJCJJ_00101	2.53e-283	-	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
PAKDJCJJ_00102	1.06e-233	ywbN	-	-	P	ko:K07223,ko:K16301	-	ko00000,ko01000,ko02000	Peroxidase
PAKDJCJJ_00103	3.79e-125	fabK	1.3.1.9	-	S	ko:K02371	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	enoyl- acyl-carrier-protein reductase II
PAKDJCJJ_00104	6.69e-24	ytcD	-	-	K	-	-	-	HxlR-like helix-turn-helix
PAKDJCJJ_00105	4.07e-292	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
PAKDJCJJ_00106	1.98e-165	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
PAKDJCJJ_00107	3.73e-97	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PAKDJCJJ_00108	3.59e-212	oroP	-	-	S	ko:K09936	ko02024,map02024	ko00000,ko00001,ko02000	Putative inner membrane exporter, YdcZ
PAKDJCJJ_00109	2.3e-226	iunH5	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	inosine-uridine preferring nucleoside hydrolase
PAKDJCJJ_00110	5.19e-31	-	-	-	-	-	-	-	-
PAKDJCJJ_00111	0.0	-	2.8.2.22	-	M	ko:K01023	-	ko00000,ko01000	Arylsulfotransferase Ig-like domain
PAKDJCJJ_00112	1.63e-172	-	-	-	S	-	-	-	B3/4 domain
PAKDJCJJ_00113	1e-158	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
PAKDJCJJ_00114	5.31e-82	ytrA	-	-	K	ko:K07979	-	ko00000,ko03000	helix_turn_helix gluconate operon transcriptional repressor
PAKDJCJJ_00115	1.03e-205	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAKDJCJJ_00116	8.3e-224	-	-	-	-	ko:K16919	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	-
PAKDJCJJ_00117	1.94e-246	-	-	-	KT	ko:K02647	-	ko00000,ko03000	Putative sugar diacid recognition
PAKDJCJJ_00118	3.85e-270	yojA	-	-	EG	ko:K03299	-	ko00000,ko02000	GntP family permease
PAKDJCJJ_00119	8.47e-264	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
PAKDJCJJ_00120	0.0	ydbT	-	-	S	ko:K08981	-	ko00000	Bacterial PH domain
PAKDJCJJ_00121	6.59e-111	ydbS	-	-	S	ko:K09167	-	ko00000	Bacterial PH domain
PAKDJCJJ_00122	8.65e-80	-	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside 2-deoxyribosyltransferase
PAKDJCJJ_00123	0.0	-	-	-	U	ko:K03457	-	ko00000	Belongs to the purine-cytosine permease (2.A.39) family
PAKDJCJJ_00124	2.65e-48	-	-	-	-	-	-	-	-
PAKDJCJJ_00125	0.0	-	-	-	K	-	-	-	Mga helix-turn-helix domain
PAKDJCJJ_00126	0.0	-	-	-	S	ko:K13730	ko05100,map05100	ko00000,ko00001	Uncharacterized protein conserved in bacteria (DUF2252)
PAKDJCJJ_00127	1e-76	-	-	-	K	-	-	-	Winged helix DNA-binding domain
PAKDJCJJ_00128	7.55e-44	-	-	-	-	-	-	-	-
PAKDJCJJ_00129	3.78e-306	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
PAKDJCJJ_00130	6.23e-305	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PAKDJCJJ_00131	4.53e-41	-	-	-	S	-	-	-	Transglycosylase associated protein
PAKDJCJJ_00132	8.61e-308	-	-	-	EGP	-	-	-	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PAKDJCJJ_00133	4.19e-207	-	-	-	GM	ko:K19426	-	ko00000,ko01000	Polysaccharide pyruvyl transferase
PAKDJCJJ_00134	6.1e-164	-	-	-	EGP	ko:K08164	-	ko00000,ko02000	Transporter
PAKDJCJJ_00135	1.12e-213	-	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
PAKDJCJJ_00136	5.89e-98	-	-	-	-	-	-	-	-
PAKDJCJJ_00137	6.11e-11	-	-	-	K	-	-	-	CsbD-like
PAKDJCJJ_00138	7.24e-102	-	-	-	T	-	-	-	Universal stress protein family
PAKDJCJJ_00139	3.06e-120	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PAKDJCJJ_00140	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
PAKDJCJJ_00141	4.43e-72	yrvD	-	-	S	-	-	-	Pfam:DUF1049
PAKDJCJJ_00142	1.19e-230	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PAKDJCJJ_00143	1.36e-37	-	-	-	-	-	-	-	-
PAKDJCJJ_00144	2.51e-158	-	-	-	-	-	-	-	-
PAKDJCJJ_00145	2.81e-314	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PAKDJCJJ_00146	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PAKDJCJJ_00147	1.21e-22	-	-	-	-	-	-	-	-
PAKDJCJJ_00148	4.51e-69	-	-	-	S	-	-	-	mazG nucleotide pyrophosphohydrolase
PAKDJCJJ_00149	3.22e-141	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
PAKDJCJJ_00150	5.91e-298	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PAKDJCJJ_00151	4.17e-298	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PAKDJCJJ_00152	9.97e-288	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PAKDJCJJ_00153	2.17e-213	-	-	-	S	-	-	-	Tetratricopeptide repeat
PAKDJCJJ_00154	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PAKDJCJJ_00155	3.39e-55	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PAKDJCJJ_00156	8e-45	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
PAKDJCJJ_00157	1.99e-237	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
PAKDJCJJ_00158	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
PAKDJCJJ_00159	7.41e-117	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	ComE operon protein 2
PAKDJCJJ_00160	1.22e-155	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
PAKDJCJJ_00161	3.63e-248	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
PAKDJCJJ_00162	4.98e-107	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PAKDJCJJ_00163	2.66e-126	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
PAKDJCJJ_00164	1.33e-57	ylbG	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2129)
PAKDJCJJ_00165	1.04e-267	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
PAKDJCJJ_00166	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
PAKDJCJJ_00167	7.71e-184	suhB	3.1.3.25	-	G	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the inositol monophosphatase superfamily
PAKDJCJJ_00168	7.2e-61	yktA	-	-	S	-	-	-	Belongs to the UPF0223 family
PAKDJCJJ_00169	2.72e-208	-	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	L-malate dehydrogenase activity
PAKDJCJJ_00170	0.0	pdhD	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	Dehydrogenase
PAKDJCJJ_00171	1.64e-285	pdhC	2.3.1.12	-	C	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PAKDJCJJ_00172	1.15e-232	pdhB	1.2.4.1	-	C	ko:K00162	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Transketolase, C-terminal domain protein
PAKDJCJJ_00173	4.77e-271	pdhA	1.2.4.1	-	C	ko:K00161	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Dehydrogenase E1 component
PAKDJCJJ_00174	9.7e-133	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PAKDJCJJ_00175	9.18e-105	-	-	-	-	-	-	-	-
PAKDJCJJ_00176	9.82e-45	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
PAKDJCJJ_00177	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PAKDJCJJ_00178	2.84e-239	-	-	-	I	-	-	-	Diacylglycerol kinase catalytic
PAKDJCJJ_00179	6.66e-39	-	-	-	-	-	-	-	-
PAKDJCJJ_00180	4.03e-213	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
PAKDJCJJ_00181	5.17e-223	ypuA	-	-	S	-	-	-	Protein of unknown function (DUF1002)
PAKDJCJJ_00182	8.94e-220	ykfC	3.4.14.13	-	M	ko:K20742	-	ko00000,ko01000,ko01002	NlpC/P60 family
PAKDJCJJ_00183	0.0	tkt2	2.2.1.1	-	H	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PAKDJCJJ_00184	3.56e-206	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PAKDJCJJ_00185	8.04e-237	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PAKDJCJJ_00186	2.25e-241	yghZ	-	-	C	ko:K19265	-	ko00000,ko01000	Aldo keto reductase family protein
PAKDJCJJ_00187	2.29e-200	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PAKDJCJJ_00188	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
PAKDJCJJ_00189	6.1e-218	nylA	3.5.1.4	-	J	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	ko00000,ko00001,ko01000	Belongs to the amidase family
PAKDJCJJ_00190	0.0	traA	-	-	L	-	-	-	MobA MobL family protein
PAKDJCJJ_00191	7.85e-35	-	-	-	-	-	-	-	-
PAKDJCJJ_00192	2.85e-53	-	-	-	-	-	-	-	-
PAKDJCJJ_00193	1.74e-35	-	-	-	S	-	-	-	protein conserved in bacteria
PAKDJCJJ_00194	1.05e-36	-	-	-	-	-	-	-	-
PAKDJCJJ_00195	2.33e-262	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
PAKDJCJJ_00196	5.71e-212	mleP2	-	-	S	ko:K07088	-	ko00000	Transporter, auxin efflux carrier (AEC) family protein
PAKDJCJJ_00197	1.27e-229	-	-	-	EG	-	-	-	EamA-like transporter family
PAKDJCJJ_00198	8.39e-159	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PAKDJCJJ_00199	5.86e-294	-	-	-	V	-	-	-	Beta-lactamase
PAKDJCJJ_00200	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
PAKDJCJJ_00202	1.63e-163	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PAKDJCJJ_00203	4.07e-74	-	-	-	-	-	-	-	-
PAKDJCJJ_00204	2.6e-129	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
PAKDJCJJ_00205	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PAKDJCJJ_00206	3e-272	yacL	-	-	S	-	-	-	domain protein
PAKDJCJJ_00207	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PAKDJCJJ_00208	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
PAKDJCJJ_00209	7.28e-92	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PAKDJCJJ_00210	5.21e-178	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PAKDJCJJ_00211	1.04e-116	yacP	-	-	S	ko:K06962	-	ko00000	YacP-like NYN domain
PAKDJCJJ_00212	1.37e-129	sigH	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	Sigma-70 region 2
PAKDJCJJ_00213	1.27e-34	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PAKDJCJJ_00214	1.61e-127	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
PAKDJCJJ_00215	4.14e-94	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PAKDJCJJ_00216	1.75e-160	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PAKDJCJJ_00217	1.3e-110	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PAKDJCJJ_00218	7.9e-74	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PAKDJCJJ_00220	9.88e-206	yckB	-	-	ET	ko:K02030,ko:K02424	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko02035	Belongs to the bacterial solute-binding protein 3 family
PAKDJCJJ_00221	6.33e-157	yckA	-	-	E	ko:K10009	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PAKDJCJJ_00222	3.99e-165	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
PAKDJCJJ_00223	4.45e-227	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PAKDJCJJ_00224	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PAKDJCJJ_00225	4.62e-153	-	-	-	S	-	-	-	repeat protein
PAKDJCJJ_00226	2.23e-156	pgm6	-	-	G	-	-	-	phosphoglycerate mutase
PAKDJCJJ_00227	2.57e-282	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PAKDJCJJ_00228	1.79e-77	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
PAKDJCJJ_00229	2.86e-288	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
PAKDJCJJ_00230	3.68e-161	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PAKDJCJJ_00231	1.36e-47	-	-	-	-	-	-	-	-
PAKDJCJJ_00232	2.49e-123	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
PAKDJCJJ_00233	4.08e-47	cspB	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
PAKDJCJJ_00234	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PAKDJCJJ_00235	3.87e-134	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
PAKDJCJJ_00236	8.04e-184	ylmH	-	-	S	-	-	-	S4 domain protein
PAKDJCJJ_00237	3.42e-55	ylmG	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
PAKDJCJJ_00238	2.58e-98	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PAKDJCJJ_00239	1.48e-287	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PAKDJCJJ_00240	7.41e-311	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PAKDJCJJ_00241	9.4e-198	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PAKDJCJJ_00242	2.92e-257	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PAKDJCJJ_00243	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PAKDJCJJ_00244	3.06e-236	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PAKDJCJJ_00245	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
PAKDJCJJ_00246	7.06e-79	ftsL	-	-	D	-	-	-	Cell division protein FtsL
PAKDJCJJ_00247	7.42e-228	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PAKDJCJJ_00248	1.38e-102	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
PAKDJCJJ_00249	8.72e-80	-	-	-	S	-	-	-	Protein of unknown function (DUF3397)
PAKDJCJJ_00250	4.92e-18	-	-	-	S	-	-	-	Protein of unknown function (DUF4044)
PAKDJCJJ_00251	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
PAKDJCJJ_00252	1.72e-125	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PAKDJCJJ_00253	3.2e-207	rrmA	2.1.1.187	-	H	ko:K00563,ko:K10947	-	ko00000,ko01000,ko03000,ko03009	Methyltransferase
PAKDJCJJ_00254	1.84e-262	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
PAKDJCJJ_00255	3.71e-139	cutC	-	-	P	ko:K06201	-	ko00000	Participates in the control of copper homeostasis
PAKDJCJJ_00256	4.02e-19	-	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
PAKDJCJJ_00257	0.0	tagE3	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
PAKDJCJJ_00258	0.0	tagE2	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
PAKDJCJJ_00259	1.11e-37	-	-	-	-	-	-	-	-
PAKDJCJJ_00260	2.22e-83	-	-	-	S	-	-	-	Pfam Methyltransferase
PAKDJCJJ_00261	2.97e-79	-	-	-	M	-	-	-	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
PAKDJCJJ_00262	1.56e-90	-	-	-	S	-	-	-	Pfam Methyltransferase
PAKDJCJJ_00264	5.76e-74	cps1C	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
PAKDJCJJ_00266	6.5e-147	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PAKDJCJJ_00267	5.96e-268	-	-	-	L	-	-	-	DDE superfamily endonuclease
PAKDJCJJ_00268	1.28e-236	wefC	-	-	M	-	-	-	Stealth protein CR2, conserved region 2
PAKDJCJJ_00269	4.07e-92	-	-	-	T	-	-	-	Universal stress protein family
PAKDJCJJ_00270	6.05e-98	-	-	-	K	-	-	-	MarR family
PAKDJCJJ_00271	9.17e-131	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PAKDJCJJ_00272	4.99e-81	-	-	-	K	-	-	-	transcriptional regulator
PAKDJCJJ_00273	1.27e-158	-	-	-	S	-	-	-	Alpha/beta hydrolase family
PAKDJCJJ_00274	7.18e-194	-	4.1.1.52	-	S	ko:K22213	-	ko00000,ko01000	Amidohydrolase
PAKDJCJJ_00276	2.07e-203	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PAKDJCJJ_00277	1.75e-115	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
PAKDJCJJ_00278	0.0	tex	-	-	K	ko:K06959	-	ko00000	Tex-like protein N-terminal domain protein
PAKDJCJJ_00279	3.12e-95	-	-	-	-	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	-
PAKDJCJJ_00280	3.85e-195	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PAKDJCJJ_00281	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PAKDJCJJ_00282	1.34e-180	tagA	2.4.1.187	GT26	F	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PAKDJCJJ_00283	7.88e-121	yfbM	-	-	K	-	-	-	FR47-like protein
PAKDJCJJ_00284	1.28e-161	yvoA_2	-	-	K	ko:K03710	-	ko00000,ko03000	UbiC transcription regulator-associated domain protein
PAKDJCJJ_00285	6.61e-278	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
PAKDJCJJ_00286	4.39e-176	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PAKDJCJJ_00289	2.67e-147	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
PAKDJCJJ_00290	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
PAKDJCJJ_00291	4.54e-70	-	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
PAKDJCJJ_00294	1.16e-242	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
PAKDJCJJ_00295	5.33e-211	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
PAKDJCJJ_00296	2.03e-118	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
PAKDJCJJ_00297	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PAKDJCJJ_00298	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PAKDJCJJ_00299	1.06e-121	-	-	-	K	-	-	-	acetyltransferase
PAKDJCJJ_00300	1.42e-110	soj	-	-	D	-	-	-	CobQ CobB MinD ParA nucleotide binding domain protein
PAKDJCJJ_00303	1.11e-73	-	-	-	L	-	-	-	recombinase activity
PAKDJCJJ_00304	8.66e-173	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
PAKDJCJJ_00305	2.18e-248	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-type multidrug transport system, permease component
PAKDJCJJ_00306	3.52e-151	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAKDJCJJ_00307	8.19e-49	-	-	-	L	-	-	-	Transposase DDE domain
PAKDJCJJ_00308	3.82e-48	-	-	-	L	-	-	-	Putative transposase of IS4/5 family (DUF4096)
PAKDJCJJ_00309	3.65e-166	-	-	-	L	-	-	-	PFAM Integrase catalytic region
PAKDJCJJ_00310	1.76e-122	-	-	-	L	ko:K07483,ko:K09936	ko02024,map02024	ko00000,ko00001,ko02000	Helix-turn-helix domain
PAKDJCJJ_00311	1.98e-243	rsgA_2	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PAKDJCJJ_00312	3.49e-100	katA	1.11.1.6	-	C	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	ko00000,ko00001,ko00002,ko01000	Belongs to the catalase family
PAKDJCJJ_00313	0.0	ybeC	-	-	E	-	-	-	amino acid
PAKDJCJJ_00314	7.04e-247	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PAKDJCJJ_00315	8.92e-77	tnpR	-	-	L	-	-	-	Resolvase, N terminal domain
PAKDJCJJ_00316	2.64e-86	-	-	-	L	-	-	-	the current gene model (or a revised gene model) may contain a frame shift
PAKDJCJJ_00317	0.0	-	-	-	S	-	-	-	Protein of unknown function DUF262
PAKDJCJJ_00318	1.15e-140	-	-	-	L	-	-	-	Transposase IS66 family
PAKDJCJJ_00321	1.02e-63	-	-	-	-	-	-	-	-
PAKDJCJJ_00323	3.25e-141	-	-	-	S	-	-	-	DNA packaging
PAKDJCJJ_00324	6.54e-210	-	-	-	S	-	-	-	Pfam:Terminase_3C
PAKDJCJJ_00325	0.0	-	-	-	S	-	-	-	Protein of unknown function (DUF1073)
PAKDJCJJ_00326	7.14e-169	-	-	-	S	-	-	-	Phage Mu protein F like protein
PAKDJCJJ_00327	6.06e-05	yocH_1	-	-	M	-	-	-	3D domain
PAKDJCJJ_00328	1.53e-218	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2213)
PAKDJCJJ_00329	3.55e-99	-	-	-	-	-	-	-	-
PAKDJCJJ_00330	8.47e-207	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2184)
PAKDJCJJ_00331	3.01e-77	-	-	-	-	-	-	-	-
PAKDJCJJ_00332	7.19e-68	-	-	-	S	-	-	-	Protein of unknown function (DUF4054)
PAKDJCJJ_00333	3.66e-153	soj	-	-	D	-	-	-	CobQ CobB MinD ParA nucleotide binding domain protein
PAKDJCJJ_00334	2.41e-30	-	-	-	S	-	-	-	Family of unknown function (DUF5388)
PAKDJCJJ_00335	1.34e-150	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
PAKDJCJJ_00336	8.01e-172	-	-	-	D	-	-	-	Cellulose biosynthesis protein BcsQ
PAKDJCJJ_00338	4.52e-111	-	-	-	S	-	-	-	Fic/DOC family
PAKDJCJJ_00339	3.17e-73	-	-	-	L	-	-	-	recombinase activity
PAKDJCJJ_00340	5.11e-72	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Belongs to the 'phage' integrase family. XerC subfamily
PAKDJCJJ_00341	1.68e-121	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PAKDJCJJ_00342	0.0	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PAKDJCJJ_00343	1.04e-215	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
PAKDJCJJ_00344	5.45e-138	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PAKDJCJJ_00345	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PAKDJCJJ_00346	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PAKDJCJJ_00347	4.34e-235	-	-	-	K	-	-	-	Transcriptional regulator
PAKDJCJJ_00348	1.94e-216	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
PAKDJCJJ_00349	1e-132	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
PAKDJCJJ_00350	4.85e-37	-	-	-	-	-	-	-	-
PAKDJCJJ_00351	1.47e-55	-	-	-	-	-	-	-	-
PAKDJCJJ_00352	1.7e-36	-	-	-	-	-	-	-	-
PAKDJCJJ_00353	1.15e-57	-	-	-	L	ko:K07473	-	ko00000,ko02048	Addiction module antitoxin, RelB DinJ family
PAKDJCJJ_00354	1.72e-143	repA	-	-	S	-	-	-	Replication initiator protein A
PAKDJCJJ_00355	1.18e-184	soj	-	-	D	-	-	-	CobQ CobB MinD ParA nucleotide binding domain protein
PAKDJCJJ_00356	2.03e-31	-	-	-	S	-	-	-	Family of unknown function (DUF5388)
PAKDJCJJ_00358	2.86e-09	-	-	-	U	-	-	-	Relaxase mobilization nuclease domain protein
PAKDJCJJ_00359	8.17e-09	-	-	-	S	-	-	-	Bacterial mobilisation protein (MobC)
PAKDJCJJ_00363	1.14e-05	-	-	-	CO	-	-	-	COG0526, thiol-disulfide isomerase and thioredoxins
PAKDJCJJ_00364	1.05e-99	repB	-	-	L	-	-	-	Initiator Replication protein
PAKDJCJJ_00365	6.73e-229	ywtF_2	-	-	K	-	-	-	Cell envelope-related transcriptional attenuator domain
PAKDJCJJ_00366	0.0	norG_2	-	-	K	-	-	-	Aminotransferase class I and II
PAKDJCJJ_00367	6.56e-181	thiD	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
PAKDJCJJ_00368	5.54e-111	hmpT	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
PAKDJCJJ_00369	3.12e-129	ywlG	-	-	S	-	-	-	Belongs to the UPF0340 family
PAKDJCJJ_00370	2.83e-32	-	-	-	S	-	-	-	Pentapeptide repeats (8 copies)
PAKDJCJJ_00371	2.51e-09	-	-	-	S	-	-	-	Pentapeptide repeats (8 copies)
PAKDJCJJ_00372	2.13e-228	-	-	-	K	ko:K02529,ko:K03435	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PAKDJCJJ_00374	2.49e-200	rihA	-	-	F	ko:K01250	-	ko00000,ko01000	Inosine-uridine preferring nucleoside hydrolase
PAKDJCJJ_00375	1.55e-151	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
PAKDJCJJ_00376	0.0	astA	2.8.2.22	-	M	ko:K01023	-	ko00000,ko01000	Arylsulfotransferase Ig-like domain
PAKDJCJJ_00377	0.0	yfkN	3.1.3.6, 3.1.4.16	-	F	ko:K01119	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PAKDJCJJ_00378	0.0	nhaP2	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
PAKDJCJJ_00379	1.48e-85	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PAKDJCJJ_00380	7.46e-59	-	-	-	-	-	-	-	-
PAKDJCJJ_00381	1.42e-218	panE	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PAKDJCJJ_00382	0.0	-	3.4.19.1	-	E	ko:K01303	-	ko00000,ko01000,ko01002	Prolyl oligopeptidase family
PAKDJCJJ_00383	6.31e-79	-	-	-	K	-	-	-	Helix-turn-helix domain
PAKDJCJJ_00384	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
PAKDJCJJ_00385	6.36e-145	M1-798	-	-	K	-	-	-	Rhodanese Homology Domain
PAKDJCJJ_00386	2.51e-61	-	-	-	CO	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	cell redox homeostasis
PAKDJCJJ_00387	1.94e-70	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
PAKDJCJJ_00388	3.05e-73	ytpP	-	-	CO	-	-	-	Thioredoxin
PAKDJCJJ_00389	3.39e-16	racX	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
PAKDJCJJ_00390	4.47e-229	trxB	1.8.1.9	-	O	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Glucose inhibited division protein A
PAKDJCJJ_00391	2.82e-153	frnE	5.3.4.1	-	Q	ko:K01829	-	ko00000,ko01000	dithiol-disulfide isomerase involved in polyketide biosynthesis
PAKDJCJJ_00393	0.0	-	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulphide oxidoreductase
PAKDJCJJ_00394	3.68e-77	yafQ	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	endonuclease activity
PAKDJCJJ_00395	1.11e-59	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
PAKDJCJJ_00396	5.09e-128	-	-	-	L	-	-	-	Integrase
PAKDJCJJ_00397	6.76e-83	-	-	-	-	-	-	-	-
PAKDJCJJ_00398	9.39e-166	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
PAKDJCJJ_00399	9.29e-40	-	-	-	S	-	-	-	Transglycosylase associated protein
PAKDJCJJ_00400	2.33e-92	-	-	-	-	-	-	-	-
PAKDJCJJ_00401	4.04e-32	-	-	-	-	-	-	-	-
PAKDJCJJ_00402	4.31e-86	-	-	-	S	-	-	-	Asp23 family, cell envelope-related function
PAKDJCJJ_00403	1.61e-70	asp2	-	-	S	-	-	-	Asp23 family, cell envelope-related function
PAKDJCJJ_00404	2.29e-12	-	-	-	-	-	-	-	-
PAKDJCJJ_00405	0.0	trePP	2.4.1.216, 2.4.1.8	GH65	G	ko:K00691,ko:K03731	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Glycosyl hydrolase family 65 central catalytic domain
PAKDJCJJ_00406	9.29e-147	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
PAKDJCJJ_00407	1.86e-167	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
PAKDJCJJ_00408	2.56e-44	-	-	-	-	-	-	-	-
PAKDJCJJ_00410	1.42e-256	-	-	-	-	-	-	-	-
PAKDJCJJ_00411	1.57e-107	-	-	-	-	-	-	-	-
PAKDJCJJ_00412	1.14e-275	-	-	-	S	-	-	-	Baseplate J-like protein
PAKDJCJJ_00414	1.85e-66	-	-	-	-	-	-	-	-
PAKDJCJJ_00415	2.41e-265	-	-	-	-	-	-	-	-
PAKDJCJJ_00416	2.29e-88	-	-	-	-	-	-	-	-
PAKDJCJJ_00417	3.4e-145	-	-	-	S	-	-	-	N-acetylmuramoyl-L-alanine amidase activity
PAKDJCJJ_00418	7.2e-220	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
PAKDJCJJ_00420	8.16e-86	-	-	-	-	-	-	-	-
PAKDJCJJ_00421	4.09e-92	-	-	-	-	-	-	-	-
PAKDJCJJ_00422	3.25e-173	-	-	-	S	-	-	-	Protein of unknown function (DUF3383)
PAKDJCJJ_00423	1.81e-79	-	-	-	-	-	-	-	-
PAKDJCJJ_00424	4.91e-87	-	-	-	-	-	-	-	-
PAKDJCJJ_00425	5.1e-54	-	-	-	-	-	-	-	-
PAKDJCJJ_00427	1.95e-45	ydaT	-	-	-	-	-	-	-
PAKDJCJJ_00428	3.17e-136	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PAKDJCJJ_00429	3.34e-145	yhxD	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
PAKDJCJJ_00430	7.49e-46	dcm	2.1.1.37	-	H	ko:K00558	ko00270,ko01100,ko05206,map00270,map01100,map05206	ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036	C-5 cytosine-specific DNA methylase
PAKDJCJJ_00431	7.44e-53	-	-	-	S	-	-	-	SnoaL-like domain
PAKDJCJJ_00432	1.8e-43	-	-	-	K	-	-	-	DNA-binding transcription factor activity
PAKDJCJJ_00433	4.76e-40	-	-	-	K	-	-	-	Putative DNA-binding domain
PAKDJCJJ_00434	1.06e-12	-	-	-	S	-	-	-	Putative Holin-like Toxin (Hol-Tox)
PAKDJCJJ_00435	6.53e-279	-	-	-	EGP	-	-	-	Major Facilitator
PAKDJCJJ_00436	6.24e-25	-	-	-	-	-	-	-	-
PAKDJCJJ_00437	4.09e-18	ytgB	-	-	S	-	-	-	Transglycosylase associated protein
PAKDJCJJ_00438	1.92e-247	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PAKDJCJJ_00439	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
PAKDJCJJ_00440	2.11e-37	-	-	-	-	-	-	-	-
PAKDJCJJ_00441	0.0	mprF	2.3.2.3	-	S	ko:K14205	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PAKDJCJJ_00442	7.64e-142	yvdD	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the LOG family
PAKDJCJJ_00443	5.35e-216	-	1.1.1.157	-	I	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	ko00000,ko00001,ko01000	3-hydroxyacyl-CoA dehydrogenase
PAKDJCJJ_00444	1.8e-248	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PAKDJCJJ_00445	6.94e-250	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PAKDJCJJ_00447	4.08e-62	-	-	-	-	-	-	-	-
PAKDJCJJ_00448	7.16e-122	-	-	-	V	-	-	-	VanZ like family
PAKDJCJJ_00449	0.0	dld	1.1.5.12	-	C	ko:K03777	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	D-lactate dehydrogenase, membrane binding
PAKDJCJJ_00450	8.61e-12	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PAKDJCJJ_00451	8.17e-36	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PAKDJCJJ_00452	0.0	-	3.2.1.45	GH30	G	ko:K01201	ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142	ko00000,ko00001,ko01000	Glycosyl hydrolase family 30 TIM-barrel domain
PAKDJCJJ_00453	1.51e-202	-	-	-	K	-	-	-	Transcriptional regulator
PAKDJCJJ_00457	3.39e-226	-	-	-	S	-	-	-	Virulence-associated protein E
PAKDJCJJ_00458	4.79e-76	-	-	-	-	-	-	-	-
PAKDJCJJ_00460	9.35e-18	-	-	-	S	-	-	-	Phage head-tail joining protein
PAKDJCJJ_00461	1.27e-66	-	-	-	L	-	-	-	HNH endonuclease
PAKDJCJJ_00462	4.45e-99	-	-	-	L	-	-	-	overlaps another CDS with the same product name
PAKDJCJJ_00463	0.0	terL	-	-	S	-	-	-	overlaps another CDS with the same product name
PAKDJCJJ_00465	1.31e-245	-	-	-	S	-	-	-	Phage portal protein
PAKDJCJJ_00466	0.0	-	-	-	S	ko:K06904	-	ko00000	Caudovirus prohead serine protease
PAKDJCJJ_00467	1.29e-193	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PAKDJCJJ_00468	9.43e-154	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
PAKDJCJJ_00469	1.7e-148	yjbH	-	-	Q	-	-	-	Thioredoxin
PAKDJCJJ_00470	3.19e-204	degV1	-	-	S	-	-	-	DegV family
PAKDJCJJ_00471	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
PAKDJCJJ_00472	1.63e-37	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
PAKDJCJJ_00473	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
PAKDJCJJ_00474	1.92e-135	mob	-	-	D	-	-	-	Plasmid recombination enzyme
PAKDJCJJ_00476	4.34e-57	-	-	-	S	-	-	-	Plasmid replication protein
PAKDJCJJ_00477	1.66e-215	-	-	-	K	-	-	-	COG COG0846 NAD-dependent protein deacetylases, SIR2 family
PAKDJCJJ_00478	0.0	-	-	-	K	ko:K09705	-	ko00000	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PAKDJCJJ_00479	4.06e-140	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAKDJCJJ_00480	2.52e-200	prpA3	3.1.3.16	-	T	ko:K01090	-	ko00000,ko01000	Calcineurin-like phosphoesterase superfamily domain
PAKDJCJJ_00481	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PAKDJCJJ_00482	3.96e-49	ykuJ	-	-	S	-	-	-	Protein of unknown function (DUF1797)
PAKDJCJJ_00483	6.38e-235	mprF	-	-	S	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PAKDJCJJ_00484	7.33e-248	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
PAKDJCJJ_00485	5.74e-285	pimB	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
PAKDJCJJ_00486	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PAKDJCJJ_00487	2.6e-54	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
PAKDJCJJ_00489	2.78e-284	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
PAKDJCJJ_00490	1.01e-112	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
PAKDJCJJ_00491	2.28e-127	-	-	-	S	-	-	-	Protein of unknown function (DUF1211)
PAKDJCJJ_00492	1.55e-105	tspO	-	-	T	ko:K05770	ko04080,ko04214,ko04979,ko05166,map04080,map04214,map04979,map05166	ko00000,ko00001,ko02000	TspO/MBR family
PAKDJCJJ_00493	0.0	yfhO	-	-	S	-	-	-	Bacterial membrane protein YfhO
PAKDJCJJ_00494	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
PAKDJCJJ_00495	2.6e-199	glcU	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
PAKDJCJJ_00496	1.6e-270	ywbD	2.1.1.191	-	J	ko:K06969	-	ko00000,ko01000,ko03009	S-adenosylmethionine-dependent methyltransferase
PAKDJCJJ_00497	0.0	yclK	-	-	T	-	-	-	Histidine kinase
PAKDJCJJ_00498	1.15e-189	yclJ	-	-	K	ko:K02483	-	ko00000,ko02022	response regulator
PAKDJCJJ_00501	5.43e-57	-	-	-	-	-	-	-	-
PAKDJCJJ_00502	0.0	XK27_00340	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PAKDJCJJ_00503	1.57e-63	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PAKDJCJJ_00504	8.29e-64	-	-	-	L	-	-	-	Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
PAKDJCJJ_00508	3.17e-149	-	-	-	S	-	-	-	HAD-hyrolase-like
PAKDJCJJ_00509	2.61e-97	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PAKDJCJJ_00510	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PAKDJCJJ_00511	9.64e-81	-	-	-	-	-	-	-	-
PAKDJCJJ_00512	3.88e-129	rsmE	2.1.1.193	-	J	ko:K09761	-	ko00000,ko01000,ko03009	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PAKDJCJJ_00513	0.0	gshR3	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Glutathione reductase
PAKDJCJJ_00514	4.21e-21	ytgB	-	-	S	-	-	-	Transglycosylase associated protein
PAKDJCJJ_00515	1.49e-164	-	-	-	S	-	-	-	Phage Mu protein F like protein
PAKDJCJJ_00518	1.92e-153	-	-	-	S	-	-	-	DJ-1/PfpI family
PAKDJCJJ_00519	1.31e-268	-	1.1.1.90	-	C	ko:K00055	ko00350,ko00360,ko00622,ko00623,ko01100,ko01120,ko01220,map00350,map00360,map00622,map00623,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Zn-dependent alcohol dehydrogenases, class III
PAKDJCJJ_00520	5.24e-191	-	-	-	K	-	-	-	LysR substrate binding domain
PAKDJCJJ_00521	2.28e-57	-	-	-	K	-	-	-	MerR, DNA binding
PAKDJCJJ_00522	7.26e-241	-	-	-	C	-	-	-	Aldo/keto reductase family
PAKDJCJJ_00523	5.22e-36	-	-	-	L	-	-	-	Transposase and inactivated derivatives IS30 family
PAKDJCJJ_00524	2.92e-26	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
PAKDJCJJ_00525	2.69e-12	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
PAKDJCJJ_00526	9.92e-122	soj	-	-	D	-	-	-	CobQ CobB MinD ParA nucleotide binding domain protein
PAKDJCJJ_00528	1.3e-95	oppC	-	-	EP	ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PAKDJCJJ_00529	1.24e-259	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PAKDJCJJ_00530	3.27e-229	oppF	-	-	P	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PAKDJCJJ_00531	3.18e-155	pgm3	-	-	G	-	-	-	phosphoglycerate mutase
PAKDJCJJ_00532	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
PAKDJCJJ_00533	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
PAKDJCJJ_00534	1.68e-225	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
PAKDJCJJ_00535	6.78e-136	-	-	-	K	-	-	-	acetyltransferase
PAKDJCJJ_00536	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
PAKDJCJJ_00537	0.0	rafA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
PAKDJCJJ_00538	2.46e-93	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
PAKDJCJJ_00539	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
PAKDJCJJ_00540	1.1e-188	arcD	-	-	E	ko:K03758	-	ko00000,ko02000	Arginine ornithine antiporter
PAKDJCJJ_00541	1.96e-127	arcD	-	-	E	ko:K03758	-	ko00000,ko02000	Arginine ornithine antiporter
PAKDJCJJ_00542	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PAKDJCJJ_00543	2.53e-124	-	1.5.1.40	-	S	ko:K06988	-	ko00000,ko01000	NADP oxidoreductase coenzyme F420-dependent
PAKDJCJJ_00544	1.56e-93	-	-	-	K	-	-	-	Transcriptional regulator
PAKDJCJJ_00545	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
PAKDJCJJ_00546	0.0	abfA	3.2.1.55	GH51	G	ko:K01209	ko00520,map00520	ko00000,ko00001,ko01000	Alpha-L-arabinofuranosidase C-terminus
PAKDJCJJ_00547	1.31e-302	lacY	-	-	G	ko:K02532	-	ko00000,ko02000	Oligosaccharide H symporter
PAKDJCJJ_00548	1.43e-256	abf	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 43 family
PAKDJCJJ_00549	8.23e-216	-	-	-	K	-	-	-	transcriptional regulator, ArsR family
PAKDJCJJ_00550	4.67e-116	maa	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
PAKDJCJJ_00551	2.23e-250	araR	-	-	K	ko:K02103	-	ko00000,ko03000	Transcriptional regulator
PAKDJCJJ_00552	0.0	araP	-	-	U	-	-	-	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PAKDJCJJ_00553	0.0	araB	2.7.1.16	-	G	ko:K00853	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	carbohydrate kinase FGGY
PAKDJCJJ_00554	5.47e-178	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
PAKDJCJJ_00555	0.0	araA	5.3.1.4	-	G	ko:K01804	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of L-arabinose to L-ribulose
PAKDJCJJ_00556	1.46e-114	maa	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose O-acetyltransferase
PAKDJCJJ_00559	5.12e-71	-	-	-	S	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	Glycine cleavage H-protein
PAKDJCJJ_00560	6.49e-212	yjbO	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PAKDJCJJ_00561	2.05e-181	yejC	-	-	S	-	-	-	Protein of unknown function (DUF1003)
PAKDJCJJ_00562	1.26e-137	-	-	-	K	ko:K06977	-	ko00000	acetyltransferase
PAKDJCJJ_00563	7.97e-113	nimA	-	-	S	ko:K07005	-	ko00000	resistance protein
PAKDJCJJ_00564	9.86e-117	paiA	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
PAKDJCJJ_00565	7.06e-93	-	-	-	-	-	-	-	-
PAKDJCJJ_00566	8.47e-136	-	-	-	EGP	-	-	-	Transmembrane secretion effector
PAKDJCJJ_00567	1.84e-113	-	-	-	EGP	-	-	-	Transmembrane secretion effector
PAKDJCJJ_00568	1.89e-293	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
PAKDJCJJ_00569	1.62e-65	azlD	-	-	S	-	-	-	Branched-chain amino acid transport protein (AzlD)
PAKDJCJJ_00570	2.38e-139	azlC	-	-	E	-	-	-	branched-chain amino acid
PAKDJCJJ_00571	1.27e-50	-	-	-	K	-	-	-	MerR HTH family regulatory protein
PAKDJCJJ_00572	1.25e-153	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
PAKDJCJJ_00573	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
PAKDJCJJ_00574	7.65e-101	-	-	-	K	-	-	-	MerR HTH family regulatory protein
PAKDJCJJ_00575	8.61e-132	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PAKDJCJJ_00576	1.24e-202	-	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
PAKDJCJJ_00577	4.18e-155	mntR	-	-	K	ko:K03709	-	ko00000,ko03000	iron dependent repressor
PAKDJCJJ_00578	1.2e-161	-	-	-	S	-	-	-	Putative threonine/serine exporter
PAKDJCJJ_00579	7.85e-96	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
PAKDJCJJ_00580	4.14e-154	-	-	-	I	-	-	-	phosphatase
PAKDJCJJ_00581	5.08e-169	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PAKDJCJJ_00583	0.0	lysP	-	-	E	ko:K03293,ko:K11733	-	ko00000,ko02000	amino acid
PAKDJCJJ_00584	2.42e-147	dgk2	-	-	F	-	-	-	deoxynucleoside kinase
PAKDJCJJ_00585	1.09e-291	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PAKDJCJJ_00594	5.66e-101	ctsR	-	-	K	ko:K03708	-	ko00000,ko03000	Belongs to the CtsR family
PAKDJCJJ_00595	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PAKDJCJJ_00596	6.68e-136	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAKDJCJJ_00597	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAKDJCJJ_00598	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAKDJCJJ_00599	3.58e-156	comC	3.4.23.43	-	NOU	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	Bacterial Peptidase A24 N-terminal domain
PAKDJCJJ_00600	1.46e-92	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PAKDJCJJ_00601	7.17e-109	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PAKDJCJJ_00602	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PAKDJCJJ_00603	4.54e-301	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
PAKDJCJJ_00604	4.46e-66	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
PAKDJCJJ_00605	1.19e-150	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PAKDJCJJ_00606	5.45e-138	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
PAKDJCJJ_00607	4.65e-58	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PAKDJCJJ_00608	1.63e-199	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PAKDJCJJ_00609	7.56e-62	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PAKDJCJJ_00610	9.77e-73	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PAKDJCJJ_00611	1.63e-154	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PAKDJCJJ_00612	3.95e-98	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PAKDJCJJ_00613	3.87e-34	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
PAKDJCJJ_00614	3.69e-54	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PAKDJCJJ_00615	1.04e-78	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PAKDJCJJ_00616	4.1e-67	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PAKDJCJJ_00617	3.53e-123	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PAKDJCJJ_00618	3.78e-88	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PAKDJCJJ_00619	1.24e-122	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PAKDJCJJ_00620	8.69e-76	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PAKDJCJJ_00621	3.46e-110	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PAKDJCJJ_00622	1.2e-33	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
PAKDJCJJ_00623	1.67e-90	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
PAKDJCJJ_00624	1.66e-304	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PAKDJCJJ_00625	5.07e-158	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PAKDJCJJ_00626	2.92e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PAKDJCJJ_00627	2.37e-79	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PAKDJCJJ_00628	6.34e-81	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PAKDJCJJ_00629	2.1e-219	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAKDJCJJ_00630	6.64e-82	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
PAKDJCJJ_00631	2.81e-194	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PAKDJCJJ_00632	3.08e-208	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PAKDJCJJ_00633	1.38e-183	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PAKDJCJJ_00634	1.91e-194	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PAKDJCJJ_00635	6.51e-103	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PAKDJCJJ_00636	3.52e-83	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
PAKDJCJJ_00637	2.09e-247	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
PAKDJCJJ_00638	4.24e-305	ktrB	-	-	P	ko:K03498	-	ko00000,ko02000	Potassium uptake protein
PAKDJCJJ_00639	9.37e-150	ktrA	-	-	P	ko:K03499	-	ko00000,ko02000	domain protein
PAKDJCJJ_00640	1.38e-251	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PAKDJCJJ_00641	1.57e-134	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin synthase
PAKDJCJJ_00642	4.04e-284	ribA	3.5.4.25, 4.1.99.12	-	H	ko:K02858,ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
PAKDJCJJ_00643	2.05e-104	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PAKDJCJJ_00644	1.27e-250	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
PAKDJCJJ_00645	0.0	-	-	-	E	ko:K03294	-	ko00000	Amino Acid
PAKDJCJJ_00646	4.39e-244	lplL	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Bacterial lipoate protein ligase C-terminus
PAKDJCJJ_00647	8.08e-213	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
PAKDJCJJ_00648	0.0	glpQ4	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	phosphodiesterase
PAKDJCJJ_00649	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
PAKDJCJJ_00650	3.32e-122	-	-	-	M	-	-	-	LysM domain protein
PAKDJCJJ_00651	0.0	-	-	-	M	-	-	-	Leucine-rich repeat (LRR) protein
PAKDJCJJ_00652	4.7e-88	-	-	-	M	-	-	-	LysM domain protein
PAKDJCJJ_00654	3.71e-76	lysM	-	-	M	-	-	-	LysM domain
PAKDJCJJ_00656	1.47e-50	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAKDJCJJ_00657	8.22e-213	kduI	5.3.1.17	-	G	ko:K01815	ko00040,map00040	ko00000,ko00001,ko01000	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
PAKDJCJJ_00658	5.18e-225	kdgK	2.7.1.45	-	G	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	pfkB family carbohydrate kinase
PAKDJCJJ_00659	3.69e-278	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAKDJCJJ_00660	3.88e-74	-	-	-	S	-	-	-	3D domain
PAKDJCJJ_00661	0.0	-	-	-	M	ko:K01992	-	ko00000,ko00002,ko02000	Exporter of polyketide antibiotics
PAKDJCJJ_00662	3.62e-215	ybhF_1	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
PAKDJCJJ_00663	1.76e-153	yagB	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
PAKDJCJJ_00664	0.0	-	-	-	V	-	-	-	MatE
PAKDJCJJ_00665	0.0	uxaC	5.3.1.12	-	G	ko:K01812	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	glucuronate isomerase
PAKDJCJJ_00666	0.0	-	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
PAKDJCJJ_00667	0.0	-	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
PAKDJCJJ_00668	0.0	uidA	3.2.1.31	-	G	ko:K01195	ko00040,ko00531,ko00860,ko00944,ko00983,ko01100,ko01110,ko04142,map00040,map00531,map00860,map00944,map00983,map01100,map01110,map04142	ko00000,ko00001,ko00002,ko01000	Belongs to the glycosyl hydrolase 2 family
PAKDJCJJ_00669	0.0	uxuB	1.1.1.57	-	G	ko:K00040	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Mannitol dehydrogenase C-terminal domain
PAKDJCJJ_00670	8.57e-216	yqhA	-	-	G	-	-	-	Aldose 1-epimerase
PAKDJCJJ_00671	3.17e-157	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
PAKDJCJJ_00672	1.41e-240	-	-	-	C	-	-	-	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAKDJCJJ_00673	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
PAKDJCJJ_00674	2.36e-217	gntZ	1.1.1.343, 1.1.1.44	-	G	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Dehydrogenase
PAKDJCJJ_00675	3.03e-166	-	-	-	K	-	-	-	FCD domain
PAKDJCJJ_00676	1.72e-270	uxuA	4.2.1.8	-	G	ko:K01686	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the dehydration of D-mannonate
PAKDJCJJ_00677	1.29e-234	exuR	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding protein domain
PAKDJCJJ_00678	0.0	-	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
PAKDJCJJ_00679	0.0	-	5.1.2.7	-	S	ko:K21619	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	tagaturonate epimerase
PAKDJCJJ_00680	0.0	uxaC	5.3.1.12	-	G	ko:K01812	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	glucuronate isomerase
PAKDJCJJ_00681	2.65e-287	-	-	-	S	-	-	-	module of peptide synthetase
PAKDJCJJ_00683	0.0	-	-	-	EGP	-	-	-	Major Facilitator
PAKDJCJJ_00686	2.65e-177	-	-	-	-	-	-	-	-
PAKDJCJJ_00687	1.42e-118	ebsC	-	-	J	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PAKDJCJJ_00688	3.02e-170	gntR1	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
PAKDJCJJ_00690	1.26e-108	zmp3	-	-	O	-	-	-	Zinc-dependent metalloprotease
PAKDJCJJ_00691	1.43e-101	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PAKDJCJJ_00692	1.29e-92	-	-	-	-	-	-	-	-
PAKDJCJJ_00693	4.29e-175	agrA	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
PAKDJCJJ_00694	7.55e-256	pltK	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
PAKDJCJJ_00695	2.55e-266	-	-	-	T	-	-	-	protein histidine kinase activity
PAKDJCJJ_00696	6.78e-165	-	-	-	IQ	-	-	-	Oxidoreductase, short chain dehydrogenase reductase family protein
PAKDJCJJ_00698	2.18e-215	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
PAKDJCJJ_00699	1.4e-99	uspA3	-	-	T	-	-	-	universal stress protein
PAKDJCJJ_00700	3.17e-131	yeaB	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PAKDJCJJ_00701	3.07e-189	-	-	-	EGP	-	-	-	Major Facilitator
PAKDJCJJ_00702	1.68e-63	-	-	-	K	-	-	-	transcriptional regulator
PAKDJCJJ_00703	0.0	oppA1	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PAKDJCJJ_00704	3.95e-224	oppC	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAKDJCJJ_00705	4.65e-229	oppB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PAKDJCJJ_00706	8.35e-230	oppF	-	-	P	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PAKDJCJJ_00707	2.64e-244	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PAKDJCJJ_00708	6.65e-104	-	-	-	K	-	-	-	Winged helix-turn-helix transcription repressor, HrcA DNA-binding
PAKDJCJJ_00709	2.46e-249	lplA	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Lipoate-protein ligase
PAKDJCJJ_00710	8.07e-91	-	-	-	-	-	-	-	-
PAKDJCJJ_00711	3.3e-63	-	-	-	-	-	-	-	-
PAKDJCJJ_00712	0.0	xylA	5.3.1.5	-	G	ko:K01805	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko01000	Belongs to the xylose isomerase family
PAKDJCJJ_00713	0.0	xylB	2.7.1.17	-	G	ko:K00854	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Xylulose kinase
PAKDJCJJ_00714	9.47e-287	xylT	-	-	EGP	-	-	-	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PAKDJCJJ_00715	7.71e-182	budC	1.1.1.304, 1.1.1.76	-	IQ	ko:K03366	ko00650,map00650	ko00000,ko00001,ko01000	reductase
PAKDJCJJ_00716	1.52e-90	frataxin	-	-	S	ko:K05937	-	ko00000	Domain of unknown function (DU1801)
PAKDJCJJ_00717	0.0	-	-	-	S	-	-	-	membrane
PAKDJCJJ_00718	6.41e-118	usp5	-	-	T	-	-	-	universal stress protein
PAKDJCJJ_00719	2.26e-125	yxkA	-	-	S	ko:K06910	-	ko00000	Phosphatidylethanolamine-binding protein
PAKDJCJJ_00720	8.35e-277	-	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
PAKDJCJJ_00721	1.35e-162	-	-	-	P	ko:K10716	-	ko00000,ko02000	Ion channel
PAKDJCJJ_00722	2.16e-77	-	-	-	-	-	-	-	-
PAKDJCJJ_00723	1.25e-216	-	-	-	C	-	-	-	Aldo keto reductase
PAKDJCJJ_00724	3.82e-91	-	-	-	-	-	-	-	-
PAKDJCJJ_00725	1.98e-123	-	-	-	S	-	-	-	Acetyltransferase (GNAT) family
PAKDJCJJ_00726	0.0	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
PAKDJCJJ_00727	5.11e-243	-	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
PAKDJCJJ_00728	7.56e-242	idhA	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAKDJCJJ_00729	8.56e-305	yufL	2.7.13.3	-	T	ko:K02476,ko:K11614	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Single cache domain 3
PAKDJCJJ_00730	8.69e-43	yufL	2.7.13.3	-	T	ko:K02476,ko:K11614	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Single cache domain 3
PAKDJCJJ_00731	3.93e-160	dctR	-	-	K	ko:K02475,ko:K11692	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	cheY-homologous receiver domain
PAKDJCJJ_00732	2.02e-277	-	-	-	S	-	-	-	ABC-2 family transporter protein
PAKDJCJJ_00733	5.04e-130	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAKDJCJJ_00734	2.83e-159	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
PAKDJCJJ_00735	2.24e-123	-	-	-	K	-	-	-	Acetyltransferase (GNAT) family
PAKDJCJJ_00736	1.15e-181	-	-	-	S	-	-	-	zinc-ribbon domain
PAKDJCJJ_00737	0.0	-	-	-	S	-	-	-	response to antibiotic
PAKDJCJJ_00739	7.49e-110	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
PAKDJCJJ_00741	4.33e-132	padC	-	-	Q	ko:K13727	-	ko00000,ko01000	Phenolic acid decarboxylase
PAKDJCJJ_00742	1.64e-108	padR	-	-	K	-	-	-	Virulence activator alpha C-term
PAKDJCJJ_00743	2.28e-132	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAKDJCJJ_00744	1.25e-239	-	1.1.1.219	-	GM	ko:K00091	-	ko00000,ko01000	Male sterility protein
PAKDJCJJ_00745	5.15e-100	-	-	-	S	ko:K02348	-	ko00000	Gnat family
PAKDJCJJ_00746	5.75e-103	yybA	-	-	K	-	-	-	Transcriptional regulator
PAKDJCJJ_00747	1.83e-96	-	-	-	-	-	-	-	-
PAKDJCJJ_00748	5.74e-120	-	-	-	-	-	-	-	-
PAKDJCJJ_00749	2.87e-126	-	-	-	P	-	-	-	Cadmium resistance transporter
PAKDJCJJ_00750	4.7e-157	-	-	-	K	ko:K03709	-	ko00000,ko03000	Helix-turn-helix diphteria tox regulatory element
PAKDJCJJ_00751	2.77e-94	usp1	-	-	T	-	-	-	Universal stress protein family
PAKDJCJJ_00752	0.0	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
PAKDJCJJ_00753	4.91e-240	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PAKDJCJJ_00754	0.0	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PAKDJCJJ_00755	2.78e-310	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PAKDJCJJ_00756	2.16e-126	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAKDJCJJ_00757	1.19e-231	-	-	-	D	ko:K06889	-	ko00000	Alpha beta
PAKDJCJJ_00758	3.29e-190	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
PAKDJCJJ_00759	1.36e-213	-	-	-	I	-	-	-	Alpha beta
PAKDJCJJ_00760	0.0	-	-	-	O	-	-	-	Pro-kumamolisin, activation domain
PAKDJCJJ_00761	3.04e-50	-	-	-	O	-	-	-	Pro-kumamolisin, activation domain
PAKDJCJJ_00762	6.12e-156	-	-	-	S	-	-	-	Membrane
PAKDJCJJ_00763	1.19e-173	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
PAKDJCJJ_00764	1.68e-50	-	-	-	-	-	-	-	-
PAKDJCJJ_00765	1.27e-147	nth2	-	-	L	ko:K07457	-	ko00000	Base excision DNA repair protein, HhH-GPD family
PAKDJCJJ_00766	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PAKDJCJJ_00767	2.05e-256	-	-	-	M	-	-	-	NlpC/P60 family
PAKDJCJJ_00768	5.55e-211	-	-	-	G	-	-	-	Peptidase_C39 like family
PAKDJCJJ_00769	4.83e-136	pncA	-	-	Q	-	-	-	Isochorismatase family
PAKDJCJJ_00770	1.03e-70	-	-	-	K	ko:K10947	-	ko00000,ko03000	Transcriptional regulator PadR-like family
PAKDJCJJ_00771	2.1e-117	-	-	-	S	-	-	-	Protein of unknown function (DUF1700)
PAKDJCJJ_00772	4.97e-206	-	-	-	S	-	-	-	Putative adhesin
PAKDJCJJ_00773	1.03e-238	dus	-	-	J	-	-	-	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PAKDJCJJ_00774	1.75e-92	fabV	1.3.1.44, 1.3.1.9	-	I	ko:K00209	ko00061,ko00650,ko01100,ko01120,ko01200,ko01212,map00061,map00650,map01100,map01120,map01200,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
PAKDJCJJ_00775	1.95e-164	fabV	1.3.1.44, 1.3.1.9	-	I	ko:K00209	ko00061,ko00650,ko01100,ko01120,ko01200,ko01212,map00061,map00650,map01100,map01120,map01200,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
PAKDJCJJ_00776	6.75e-96	-	-	-	C	-	-	-	Flavodoxin
PAKDJCJJ_00777	2.42e-127	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PAKDJCJJ_00778	7.74e-315	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
PAKDJCJJ_00779	1.19e-152	-	-	-	-	-	-	-	-
PAKDJCJJ_00780	4.04e-136	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
PAKDJCJJ_00781	0.0	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
PAKDJCJJ_00782	6.78e-289	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
PAKDJCJJ_00783	1.07e-238	adhP	1.1.1.1	-	C	ko:K00001,ko:K13953	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
PAKDJCJJ_00784	3.05e-90	-	-	-	K	ko:K03719	-	ko00000,ko03000,ko03036	AsnC family
PAKDJCJJ_00785	1.94e-216	proV	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PAKDJCJJ_00786	0.0	-	-	-	EM	ko:K05845,ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PAKDJCJJ_00787	7.55e-265	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
PAKDJCJJ_00788	2.57e-127	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
PAKDJCJJ_00789	4.76e-111	-	-	-	K	-	-	-	MarR family
PAKDJCJJ_00790	0.0	pacL1	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
PAKDJCJJ_00792	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PAKDJCJJ_00793	1.47e-197	-	-	-	-	-	-	-	-
PAKDJCJJ_00794	6.54e-127	maa	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose O-acetyltransferase
PAKDJCJJ_00795	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PAKDJCJJ_00796	1.32e-221	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PAKDJCJJ_00797	4.18e-315	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PAKDJCJJ_00798	8.97e-171	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
PAKDJCJJ_00799	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
PAKDJCJJ_00800	4.57e-214	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PAKDJCJJ_00801	1.34e-152	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
PAKDJCJJ_00802	1.77e-165	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
PAKDJCJJ_00803	1e-106	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
PAKDJCJJ_00804	4.01e-132	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PAKDJCJJ_00805	3.93e-99	rppH3	-	-	F	-	-	-	NUDIX domain
PAKDJCJJ_00806	6.36e-256	xerS	-	-	L	ko:K04763	-	ko00000,ko03036	Belongs to the 'phage' integrase family
PAKDJCJJ_00807	9.52e-43	-	-	-	-	-	-	-	-
PAKDJCJJ_00808	9.17e-219	-	-	-	-	-	-	-	-
PAKDJCJJ_00809	4.84e-169	-	-	-	Q	-	-	-	Methyltransferase domain
PAKDJCJJ_00810	7.5e-53	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase
PAKDJCJJ_00811	0.0	hsdR	3.1.21.3	-	V	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
PAKDJCJJ_00812	1.15e-300	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
PAKDJCJJ_00813	3.79e-26	-	-	-	-	-	-	-	-
PAKDJCJJ_00814	1.91e-242	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
PAKDJCJJ_00816	1.6e-103	-	-	-	M	-	-	-	hydrolase, family 25
PAKDJCJJ_00818	3.47e-144	XK27_00340	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PAKDJCJJ_00819	1.17e-89	yjbO	5.4.99.23	-	G	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PAKDJCJJ_00820	3.29e-232	-	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Ribonucleotide reductase, small chain
PAKDJCJJ_00821	1.95e-220	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Ribonucleotide reductase, small chain
PAKDJCJJ_00822	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PAKDJCJJ_00823	7.07e-106	nrdI	-	-	F	ko:K03647	-	ko00000	NrdI Flavodoxin like
PAKDJCJJ_00824	8.37e-171	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PAKDJCJJ_00825	0.0	hsdR	3.1.21.3	-	V	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
PAKDJCJJ_00826	1.2e-211	-	-	-	L	-	-	-	Initiator Replication protein
PAKDJCJJ_00827	2.17e-62	-	-	-	-	-	-	-	-
PAKDJCJJ_00831	0.0	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PAKDJCJJ_00832	1.52e-302	mesE	-	-	M	ko:K12293,ko:K20345	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko02000	Transport protein ComB
PAKDJCJJ_00834	8.57e-38	-	-	-	DJ	-	-	-	ParE toxin of type II toxin-antitoxin system, parDE
PAKDJCJJ_00835	3.2e-76	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
PAKDJCJJ_00836	3.16e-59	-	-	-	T	ko:K07172	-	ko00000,ko02048	Antidote-toxin recognition MazE, bacterial antitoxin
PAKDJCJJ_00837	2.27e-247	-	-	-	L	ko:K07482	-	ko00000	PFAM Integrase, catalytic core
PAKDJCJJ_00843	9.32e-40	-	-	-	-	-	-	-	-
PAKDJCJJ_00844	5.92e-230	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
PAKDJCJJ_00845	6.16e-121	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
PAKDJCJJ_00847	7.68e-225	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PAKDJCJJ_00848	4.95e-215	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
PAKDJCJJ_00849	2.14e-234	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
PAKDJCJJ_00850	1.98e-198	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PAKDJCJJ_00851	4.08e-219	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PAKDJCJJ_00852	7.21e-50	yvlD	-	-	S	ko:K08972	-	ko00000	Mycobacterial 4 TMS phage holin, superfamily IV
PAKDJCJJ_00853	5.88e-72	-	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain protein
PAKDJCJJ_00854	1.68e-155	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
PAKDJCJJ_00855	6.12e-180	pstB1	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PAKDJCJJ_00856	5.46e-194	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PAKDJCJJ_00857	1.68e-198	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
PAKDJCJJ_00858	5.41e-202	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
PAKDJCJJ_00859	2.25e-207	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
PAKDJCJJ_00860	0.0	phoR	2.7.13.3	-	T	ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PAKDJCJJ_00861	2.49e-166	phoP	-	-	K	ko:K07658	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
PAKDJCJJ_00862	1.25e-284	minJ	-	-	O	-	-	-	Domain present in PSD-95, Dlg, and ZO-1/2.
PAKDJCJJ_00863	3.24e-236	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PAKDJCJJ_00864	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PAKDJCJJ_00865	3.5e-126	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PAKDJCJJ_00866	8.73e-164	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
PAKDJCJJ_00867	0.0	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
PAKDJCJJ_00868	7.13e-149	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
PAKDJCJJ_00869	6.19e-243	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	transferase
PAKDJCJJ_00870	1.36e-90	lrgA	-	-	S	ko:K05338	ko02020,map02020	ko00000,ko00001,ko02000	LrgA family
PAKDJCJJ_00871	1.8e-180	lrgB	-	-	M	ko:K05339	ko02020,map02020	ko00000,ko00001	LrgB-like family
PAKDJCJJ_00872	0.0	ydaO	-	-	E	-	-	-	amino acid
PAKDJCJJ_00873	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PAKDJCJJ_00874	1.56e-60	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PAKDJCJJ_00875	4.67e-146	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PAKDJCJJ_00876	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
PAKDJCJJ_00877	8.86e-62	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
PAKDJCJJ_00878	3.26e-275	yycB	-	-	P	ko:K03449	-	ko00000,ko02000	Transporter, major facilitator family protein
PAKDJCJJ_00879	1.74e-250	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PAKDJCJJ_00880	4.04e-142	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
PAKDJCJJ_00881	1.01e-163	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
PAKDJCJJ_00882	9.84e-183	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
PAKDJCJJ_00883	1.16e-209	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PAKDJCJJ_00884	3.21e-62	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
PAKDJCJJ_00885	9.74e-231	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
PAKDJCJJ_00886	5.88e-72	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
PAKDJCJJ_00887	2.72e-145	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PAKDJCJJ_00888	2.48e-52	yaaL	-	-	S	-	-	-	Protein of unknown function (DUF2508)
PAKDJCJJ_00889	1.31e-141	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PAKDJCJJ_00890	9.59e-58	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PAKDJCJJ_00891	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PAKDJCJJ_00892	1.27e-122	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PAKDJCJJ_00893	1.46e-140	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
PAKDJCJJ_00895	1.92e-50	nrdH	-	-	O	ko:K06191	-	ko00000	Glutaredoxin
PAKDJCJJ_00896	6.08e-90	cps3B	-	-	S	ko:K07011	-	ko00000	Glycosyltransferase like family 2
PAKDJCJJ_00897	4.06e-92	XK27_01805	-	-	M	-	-	-	Glycosyltransferase like family 2
PAKDJCJJ_00898	9.75e-38	-	-	-	M	-	-	-	Glycosyl transferase 4-like domain
PAKDJCJJ_00899	4.58e-217	psaA	-	-	P	ko:K02077,ko:K11707	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
PAKDJCJJ_00900	0.0	XK27_06930	-	-	V	ko:K01421	-	ko00000	domain protein
PAKDJCJJ_00901	2.02e-131	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAKDJCJJ_00902	1.34e-151	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
PAKDJCJJ_00905	0.0	gshR	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Glutathione reductase
PAKDJCJJ_00906	6.35e-278	-	-	-	EGP	-	-	-	Transmembrane secretion effector
PAKDJCJJ_00907	5.56e-213	ropB	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PAKDJCJJ_00908	2.17e-97	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
PAKDJCJJ_00909	8.08e-147	yviA	-	-	S	-	-	-	Protein of unknown function (DUF421)
PAKDJCJJ_00910	4.9e-126	-	-	-	I	-	-	-	NUDIX domain
PAKDJCJJ_00913	9.43e-27	-	-	-	-	-	-	-	-
PAKDJCJJ_00914	7.52e-144	-	-	-	S	ko:K07118	-	ko00000	NAD(P)H-binding
PAKDJCJJ_00915	6.04e-71	-	-	-	K	-	-	-	Transcriptional regulators
PAKDJCJJ_00917	9.29e-159	-	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	CobQ CobB MinD ParA nucleotide binding domain protein
PAKDJCJJ_00918	3.49e-39	-	-	-	L	-	-	-	Transposase DDE domain group 1
PAKDJCJJ_00919	3.02e-276	-	-	-	L	-	-	-	Plasmid recombination enzyme
PAKDJCJJ_00920	1.13e-271	-	-	-	L	-	-	-	Initiator Replication protein
PAKDJCJJ_00921	2.25e-125	-	-	-	-	-	-	-	-
PAKDJCJJ_00922	0.0	hsdR	3.1.21.3	-	V	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
PAKDJCJJ_00923	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
PAKDJCJJ_00924	4.86e-10	hsdS	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
PAKDJCJJ_00925	1.56e-230	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
PAKDJCJJ_00926	1.79e-71	-	-	-	-	-	-	-	-
PAKDJCJJ_00927	7.94e-65	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PAKDJCJJ_00928	6.81e-83	-	-	-	-	-	-	-	-
PAKDJCJJ_00930	7.67e-56	-	-	-	-	-	-	-	-
PAKDJCJJ_00932	2.82e-281	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
PAKDJCJJ_00934	2.31e-141	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PAKDJCJJ_00935	7.41e-92	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
PAKDJCJJ_00936	4.27e-111	rfbP	-	-	M	ko:K13012,ko:K19428	-	ko00000,ko01000,ko01005	Bacterial sugar transferase
PAKDJCJJ_00937	1.35e-08	-	-	-	G	-	-	-	Glycosyl transferase 4-like domain
PAKDJCJJ_00941	1.38e-34	-	-	-	-	-	-	-	-
PAKDJCJJ_00943	9.37e-198	-	-	-	L	-	-	-	Initiator Replication protein
PAKDJCJJ_00944	0.000537	-	-	-	-	-	-	-	-
PAKDJCJJ_00947	3.25e-291	gltT	-	-	U	ko:K03309,ko:K11102	-	ko00000,ko02000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PAKDJCJJ_00948	1.1e-87	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
PAKDJCJJ_00949	9.04e-70	hsdS	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	type I restriction modification DNA specificity domain protein
PAKDJCJJ_00951	1.87e-36	epsB	-	-	M	-	-	-	biosynthesis protein
PAKDJCJJ_00952	0.0	-	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	ABC transporter
PAKDJCJJ_00955	0.0	-	-	-	-	-	-	-	-
PAKDJCJJ_00956	1.18e-50	-	-	-	-	-	-	-	-
PAKDJCJJ_00957	0.0	-	-	-	E	-	-	-	Peptidase family C69
PAKDJCJJ_00958	2.55e-153	rcfA	-	-	K	ko:K21562	-	ko00000,ko03000	Transcriptional regulator, Crp Fnr family
PAKDJCJJ_00959	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
PAKDJCJJ_00960	0.0	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
PAKDJCJJ_00961	3.16e-170	racX	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
PAKDJCJJ_00962	4.57e-71	-	-	-	S	-	-	-	Protein of unknown function (DUF1516)
PAKDJCJJ_00963	2.14e-127	ywjB	-	-	H	-	-	-	RibD C-terminal domain
PAKDJCJJ_00964	7.26e-304	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
PAKDJCJJ_00965	3.49e-24	-	-	-	-	-	-	-	-
PAKDJCJJ_00967	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
PAKDJCJJ_00968	5.9e-103	argR	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
PAKDJCJJ_00969	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
PAKDJCJJ_00970	2.44e-71	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
PAKDJCJJ_00971	2.3e-297	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
PAKDJCJJ_00972	0.0	yhaN	-	-	L	-	-	-	AAA domain
PAKDJCJJ_00973	2.83e-237	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
PAKDJCJJ_00974	8.85e-195	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PAKDJCJJ_00975	1.78e-67	-	-	-	-	-	-	-	-
PAKDJCJJ_00976	1.52e-108	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	histidine triad
PAKDJCJJ_00977	1.16e-172	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAKDJCJJ_00978	5.74e-284	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
PAKDJCJJ_00979	7.79e-193	ytmP	-	-	M	-	-	-	Choline/ethanolamine kinase
PAKDJCJJ_00980	7.82e-160	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PAKDJCJJ_00981	1.27e-219	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
PAKDJCJJ_00982	2.13e-62	-	-	-	L	-	-	-	MobA MobL family protein
PAKDJCJJ_00983	3.47e-200	traI	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PAKDJCJJ_00984	0.0	potE	-	-	E	-	-	-	Amino Acid
PAKDJCJJ_00985	0.0	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PAKDJCJJ_00986	2.96e-198	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PAKDJCJJ_00987	1.22e-36	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
PAKDJCJJ_00988	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PAKDJCJJ_00990	2.47e-74	-	-	-	S	-	-	-	Protein of unknown function (DUF2975)
PAKDJCJJ_00991	6.21e-39	yozG	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
PAKDJCJJ_00992	2.09e-285	-	-	-	-	-	-	-	-
PAKDJCJJ_00993	1.41e-136	-	-	-	-	-	-	-	-
PAKDJCJJ_00994	7.55e-265	icaA	-	-	M	-	-	-	Glycosyl transferase family group 2
PAKDJCJJ_00995	5.82e-73	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PAKDJCJJ_00996	3.1e-143	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PAKDJCJJ_00997	0.0	yhcA	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAKDJCJJ_00998	3.09e-133	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
PAKDJCJJ_00999	8.26e-92	arsC	1.20.4.1	-	T	ko:K03741	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PAKDJCJJ_01000	6.09e-53	-	-	-	S	-	-	-	Mor transcription activator family
PAKDJCJJ_01001	2.33e-56	-	-	-	S	-	-	-	Mor transcription activator family
PAKDJCJJ_01002	6.64e-162	-	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	N-acetylmuramoyl-L-alanine amidase
PAKDJCJJ_01004	9.32e-165	ybhF_2	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
PAKDJCJJ_01005	9.15e-250	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
PAKDJCJJ_01006	7.75e-145	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAKDJCJJ_01007	1.24e-225	lctO	1.13.12.4	-	C	ko:K00467,ko:K10530	ko00620,map00620	ko00000,ko00001,ko01000	L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
PAKDJCJJ_01008	1.45e-78	-	-	-	S	-	-	-	Belongs to the HesB IscA family
PAKDJCJJ_01009	2.25e-210	nhaK	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
PAKDJCJJ_01011	1.03e-37	yycB	-	-	P	ko:K03449	-	ko00000,ko02000	Major Facilitator Superfamily
PAKDJCJJ_01012	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
PAKDJCJJ_01013	8.1e-236	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
PAKDJCJJ_01014	5.39e-23	-	-	-	GM	-	-	-	Male sterility protein
PAKDJCJJ_01015	5.8e-92	-	-	-	GM	-	-	-	Male sterility protein
PAKDJCJJ_01016	3.48e-103	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PAKDJCJJ_01017	1.61e-87	-	-	-	K	ko:K18909	-	ko00000,ko00002,ko01504,ko03000	MarR family
PAKDJCJJ_01018	1.57e-65	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2316)
PAKDJCJJ_01019	1.97e-253	adhB	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
PAKDJCJJ_01020	3.18e-49	-	-	-	K	-	-	-	Transcriptional regulator
PAKDJCJJ_01021	1e-37	-	-	-	K	-	-	-	Transcriptional regulator
PAKDJCJJ_01022	3.33e-208	akr5f	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
PAKDJCJJ_01023	5.34e-212	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	Oxidoreductase, aldo keto reductase family protein
PAKDJCJJ_01024	2.51e-108	-	-	-	-	-	-	-	-
PAKDJCJJ_01025	9.71e-274	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
PAKDJCJJ_01026	2.07e-196	yitU	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
PAKDJCJJ_01027	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
PAKDJCJJ_01028	7.01e-244	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PAKDJCJJ_01029	1.29e-261	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
PAKDJCJJ_01030	2.91e-230	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
PAKDJCJJ_01031	1.74e-222	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	mevalonate kinase
PAKDJCJJ_01032	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
PAKDJCJJ_01033	1.53e-113	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
PAKDJCJJ_01034	1.13e-271	aspB	2.6.1.1, 2.6.1.14	-	E	ko:K00812,ko:K22457	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase
PAKDJCJJ_01035	1.33e-159	dnaD	-	-	L	ko:K02086	-	ko00000	Replication initiation and membrane attachment
PAKDJCJJ_01036	2.51e-115	yetL	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PAKDJCJJ_01037	2.29e-81	-	-	-	P	-	-	-	Rhodanese Homology Domain
PAKDJCJJ_01038	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
PAKDJCJJ_01039	9.96e-147	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PAKDJCJJ_01040	1.96e-138	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
PAKDJCJJ_01041	7e-52	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PAKDJCJJ_01043	8.39e-281	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
PAKDJCJJ_01044	2.51e-90	-	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
PAKDJCJJ_01045	1.67e-315	amt	-	-	P	ko:K03320	-	ko00000,ko02000	ammonium transporter
PAKDJCJJ_01046	1.17e-38	-	-	-	-	-	-	-	-
PAKDJCJJ_01047	2.96e-109	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	Belongs to the Nudix hydrolase family
PAKDJCJJ_01048	1.16e-72	-	-	-	-	-	-	-	-
PAKDJCJJ_01049	1.57e-163	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PAKDJCJJ_01050	7.14e-111	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAKDJCJJ_01051	1.79e-144	XK27_02070	-	-	S	ko:K07078	-	ko00000	Nitroreductase family
PAKDJCJJ_01052	5.32e-265	yurR	1.4.5.1	-	E	ko:K00285	ko00360,map00360	ko00000,ko00001,ko01000	FAD dependent oxidoreductase
PAKDJCJJ_01053	1.59e-90	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Ribonuclease HI
PAKDJCJJ_01054	1.53e-74	esbA	-	-	S	-	-	-	Family of unknown function (DUF5322)
PAKDJCJJ_01055	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
PAKDJCJJ_01056	7.74e-106	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PAKDJCJJ_01057	3.12e-221	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PAKDJCJJ_01058	6.85e-115	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PAKDJCJJ_01059	8.1e-261	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the CarA family
PAKDJCJJ_01060	0.0	pyrAB2	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
PAKDJCJJ_01061	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
PAKDJCJJ_01062	2.12e-92	-	-	-	K	-	-	-	Transcriptional regulator
PAKDJCJJ_01063	5.4e-253	npp	-	-	S	-	-	-	type I phosphodiesterase nucleotide pyrophosphatase
PAKDJCJJ_01064	1.28e-295	yxiO	-	-	S	ko:K06902	ko04138,map04138	ko00000,ko00001,ko02000,ko04131	Vacuole effluxer Atg22 like
PAKDJCJJ_01065	2.42e-204	-	-	-	S	-	-	-	EDD domain protein, DegV family
PAKDJCJJ_01066	1.61e-113	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
PAKDJCJJ_01067	2.46e-97	gtcA	-	-	S	-	-	-	Teichoic acid glycosylation protein
PAKDJCJJ_01068	6.2e-114	ysaA	-	-	V	-	-	-	VanZ like family
PAKDJCJJ_01069	1.31e-119	-	-	-	V	-	-	-	VanZ like family
PAKDJCJJ_01070	2.15e-153	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PAKDJCJJ_01071	3.27e-187	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PAKDJCJJ_01072	3.15e-229	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
PAKDJCJJ_01073	7.28e-127	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase
PAKDJCJJ_01076	3.81e-309	traI	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PAKDJCJJ_01077	3.89e-05	-	-	-	-	-	-	-	-
PAKDJCJJ_01078	1.28e-134	-	-	-	-	-	-	-	-
PAKDJCJJ_01080	3.57e-120	-	-	-	K	-	-	-	Domain of unknown function (DUF1836)
PAKDJCJJ_01081	0.0	yfgQ	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
PAKDJCJJ_01082	6.97e-05	-	-	-	-	-	-	-	-
PAKDJCJJ_01083	7.86e-207	yvgN	-	-	S	-	-	-	Aldo keto reductase
PAKDJCJJ_01084	0.0	-	-	-	E	-	-	-	Amino Acid
PAKDJCJJ_01085	5.23e-97	hsp1	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
PAKDJCJJ_01086	1.62e-80	-	-	-	-	-	-	-	-
PAKDJCJJ_01087	4.06e-315	yhdP	-	-	S	-	-	-	Transporter associated domain
PAKDJCJJ_01088	3.8e-225	-	-	-	K	ko:K02525	-	ko00000,ko03000	Transcriptional regulator, LacI family
PAKDJCJJ_01089	6.89e-184	kduD	1.1.1.127	-	IQ	ko:K00065	ko00040,map00040	ko00000,ko00001,ko01000	Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PAKDJCJJ_01091	0.0	lmrB	-	-	U	ko:K18926	-	ko00000,ko00002,ko02000	Belongs to the major facilitator superfamily
PAKDJCJJ_01092	0.0	-	-	-	S	ko:K18231,ko:K19349	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ATPases associated with a variety of cellular activities
PAKDJCJJ_01093	1.39e-111	nrdI	-	-	F	ko:K03647	-	ko00000	Belongs to the NrdI family
PAKDJCJJ_01094	1.38e-174	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
PAKDJCJJ_01095	6.13e-313	glpT	-	-	G	ko:K02445	-	ko00000,ko02000	Major Facilitator Superfamily
PAKDJCJJ_01096	1.13e-273	yttB	-	-	EGP	-	-	-	Major Facilitator
PAKDJCJJ_01097	3.88e-149	-	-	-	-	-	-	-	-
PAKDJCJJ_01098	1.85e-204	-	1.1.1.65	-	C	ko:K05275	ko00750,ko01100,ko01120,map00750,map01100,map01120	ko00000,ko00001,ko01000	Aldo keto reductase
PAKDJCJJ_01099	1.65e-204	-	2.3.1.81	-	V	ko:K00662	-	ko00000,ko01000,ko01504	Aminoglycoside 3-N-acetyltransferase
PAKDJCJJ_01100	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PAKDJCJJ_01101	3.49e-102	-	-	-	S	ko:K02348	-	ko00000	Gnat family
PAKDJCJJ_01102	4.64e-96	-	-	-	K	-	-	-	Transcriptional regulator
PAKDJCJJ_01103	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PAKDJCJJ_01106	5.81e-63	-	-	-	K	-	-	-	Helix-turn-helix domain
PAKDJCJJ_01108	3.28e-61	-	-	-	-	-	-	-	-
PAKDJCJJ_01109	5.26e-148	-	-	-	GM	-	-	-	NAD(P)H-binding
PAKDJCJJ_01110	1.84e-80	-	-	-	-	-	-	-	-
PAKDJCJJ_01111	5.01e-138	ahpC	1.11.1.15	-	O	ko:K03386	ko04214,map04214	ko00000,ko00001,ko01000,ko04147	Peroxiredoxin
PAKDJCJJ_01112	3.67e-34	-	-	-	-	-	-	-	-
PAKDJCJJ_01125	8.31e-119	-	-	-	O	-	-	-	Zinc-dependent metalloprotease
PAKDJCJJ_01126	3.44e-70	ybjQ	-	-	S	-	-	-	Belongs to the UPF0145 family
PAKDJCJJ_01127	1.54e-135	-	-	-	-	-	-	-	-
PAKDJCJJ_01128	2.78e-82	-	-	-	-	-	-	-	-
PAKDJCJJ_01129	1.42e-156	-	-	-	-	-	-	-	-
PAKDJCJJ_01130	3.39e-274	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PAKDJCJJ_01131	0.0	mdr	-	-	EGP	-	-	-	Major Facilitator
PAKDJCJJ_01132	1.39e-74	XK27_08430	-	-	S	-	-	-	Staphylococcal protein of unknown function (DUF960)
PAKDJCJJ_01133	1.03e-155	dgk2	-	-	F	-	-	-	Deoxynucleoside kinase
PAKDJCJJ_01134	7.76e-185	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
PAKDJCJJ_01135	2.48e-151	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
PAKDJCJJ_01136	0.0	trePP	2.4.1.216, 2.4.1.8	GH65	G	ko:K00691,ko:K03731	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Glycosyl hydrolase family 65 central catalytic domain
PAKDJCJJ_01137	2.79e-226	-	1.1.1.26	-	CH	ko:K00015	ko00630,ko01100,ko01110,ko01120,map00630,map01100,map01110,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAKDJCJJ_01138	3.58e-51	-	-	-	-	-	-	-	-
PAKDJCJJ_01139	4.3e-158	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PAKDJCJJ_01140	3.26e-106	ohrR	-	-	K	-	-	-	Transcriptional regulator
PAKDJCJJ_01141	2.55e-08	-	-	-	L	ko:K07483	-	ko00000	Transposase and inactivated derivatives
PAKDJCJJ_01142	2.29e-251	-	-	-	O	-	-	-	Heat shock 70 kDa protein
PAKDJCJJ_01143	1.42e-57	-	-	-	-	-	-	-	-
PAKDJCJJ_01144	1.07e-70	-	-	-	-	-	-	-	-
PAKDJCJJ_01145	1.02e-77	epsH	-	-	M	-	-	-	Glycosyl transferase family 2
PAKDJCJJ_01146	7.07e-102	-	-	-	M	-	-	-	Glycosyltransferase, group 1 family protein
PAKDJCJJ_01147	8.51e-112	epsD	-	GT4	M	ko:K19422	-	ko00000,ko01000	Glycosyl transferase 4-like
PAKDJCJJ_01148	9.06e-172	capN	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	NAD-dependent epimerase
PAKDJCJJ_01149	1.87e-125	capM	-	-	M	ko:K13012	-	ko00000,ko01005	Bacterial sugar transferase
PAKDJCJJ_01150	0.0	capD	-	-	GM	-	-	-	CoA-binding domain
PAKDJCJJ_01151	3.17e-134	cps2D	5.1.3.2, 5.1.3.25	-	M	ko:K01784,ko:K17947	ko00052,ko00520,ko00523,ko01100,ko01130,map00052,map00520,map00523,map01100,map01130	ko00000,ko00001,ko00002,ko01000	RmlD substrate binding domain
PAKDJCJJ_01152	5.85e-88	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
PAKDJCJJ_01153	4.55e-84	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PAKDJCJJ_01154	1.56e-72	-	-	-	M	-	-	-	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
PAKDJCJJ_01155	1.16e-191	-	-	-	T	-	-	-	diguanylate cyclase
PAKDJCJJ_01156	3.9e-29	-	-	-	-	-	-	-	-
PAKDJCJJ_01157	0.0	-	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
PAKDJCJJ_01158	1.19e-295	ycbA	2.7.13.3	-	T	ko:K07706,ko:K07717	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	histidine kinase DNA gyrase B
PAKDJCJJ_01159	1.23e-191	-	-	-	KT	ko:K07719	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	YcbB domain
PAKDJCJJ_01160	0.0	arcD	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
PAKDJCJJ_01161	0.0	arcT	-	-	E	-	-	-	Dipeptidase
PAKDJCJJ_01163	2.74e-265	-	-	-	-	-	-	-	-
PAKDJCJJ_01164	1.58e-138	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
PAKDJCJJ_01165	1.4e-213	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
PAKDJCJJ_01166	2.31e-283	-	-	-	U	-	-	-	Belongs to the major facilitator superfamily
PAKDJCJJ_01167	5.32e-53	-	-	-	S	-	-	-	Protein of unknown function (DUF3781)
PAKDJCJJ_01168	4.28e-53	-	-	-	-	-	-	-	-
PAKDJCJJ_01169	1.43e-111	yafP	-	-	K	ko:K03830	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
PAKDJCJJ_01170	3.05e-169	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PAKDJCJJ_01171	0.0	-	-	-	M	-	-	-	domain protein
PAKDJCJJ_01172	4.12e-236	ydbI	-	-	K	-	-	-	AI-2E family transporter
PAKDJCJJ_01173	1.12e-272	xylR	-	-	GK	-	-	-	ROK family
PAKDJCJJ_01174	4.7e-177	-	-	-	-	-	-	-	-
PAKDJCJJ_01175	2.81e-303	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
PAKDJCJJ_01176	1.3e-71	-	-	-	S	-	-	-	branched-chain amino acid
PAKDJCJJ_01177	2.86e-176	azlC	-	-	E	-	-	-	AzlC protein
PAKDJCJJ_01178	7.91e-115	ywnH	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	Acetyltransferase (GNAT) domain
PAKDJCJJ_01179	0.0	gshR3	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Glutathione reductase
PAKDJCJJ_01180	1.72e-41	-	-	-	S	ko:K21449	-	ko00000,ko02000	Domain of unknown function (DUF4430)
PAKDJCJJ_01181	0.0	yhgE	-	-	V	ko:K01421	-	ko00000	domain protein
PAKDJCJJ_01182	2.55e-305	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PAKDJCJJ_01183	1.68e-275	hpk31	-	-	T	-	-	-	Histidine kinase
PAKDJCJJ_01184	4.64e-159	vanR	-	-	K	-	-	-	response regulator
PAKDJCJJ_01185	4.95e-268	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PAKDJCJJ_01186	3.62e-137	-	-	-	-	-	-	-	-
PAKDJCJJ_01187	2.48e-170	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
PAKDJCJJ_01188	2.3e-255	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PAKDJCJJ_01189	1.15e-43	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
PAKDJCJJ_01190	1.44e-199	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
PAKDJCJJ_01191	3.52e-176	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
PAKDJCJJ_01192	1.18e-190	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
PAKDJCJJ_01193	2.3e-170	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
PAKDJCJJ_01194	5.24e-152	-	3.1.4.17, 3.1.4.53	-	S	ko:K01120,ko:K03651	ko00230,ko02025,map00230,map02025	ko00000,ko00001,ko01000	Calcineurin-like phosphoesterase
PAKDJCJJ_01195	1.76e-29	-	3.1.4.17, 3.1.4.53	-	S	ko:K01120,ko:K03651	ko00230,ko02025,map00230,map02025	ko00000,ko00001,ko01000	Calcineurin-like phosphoesterase
PAKDJCJJ_01196	5.58e-218	rihA	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
PAKDJCJJ_01197	7.77e-283	pbuO_1	-	-	S	ko:K06901	-	ko00000,ko02000	Permease family
PAKDJCJJ_01198	2.55e-288	nupG	-	-	F	ko:K16323	-	ko00000,ko02000	Nucleoside
PAKDJCJJ_01199	1.2e-197	-	5.4.2.7	-	G	ko:K01839	ko00030,ko00230,map00030,map00230	ko00000,ko00001,ko01000	Metalloenzyme superfamily
PAKDJCJJ_01200	7.47e-148	-	-	-	GM	-	-	-	NmrA-like family
PAKDJCJJ_01201	4.83e-59	-	-	-	-	-	-	-	-
PAKDJCJJ_01202	1.3e-124	-	-	-	-	-	-	-	-
PAKDJCJJ_01203	6.01e-54	-	-	-	-	-	-	-	-
PAKDJCJJ_01204	2.61e-83	-	-	-	K	-	-	-	HxlR-like helix-turn-helix
PAKDJCJJ_01206	9.86e-153	-	-	-	-	-	-	-	-
PAKDJCJJ_01207	0.0	-	-	-	-	-	-	-	-
PAKDJCJJ_01209	3.53e-274	-	-	-	-	-	-	-	-
PAKDJCJJ_01210	3.11e-78	-	-	-	-	-	-	-	-
PAKDJCJJ_01211	5.88e-276	-	-	-	EK	-	-	-	Aminotransferase, class I
PAKDJCJJ_01212	5.98e-212	-	-	-	K	-	-	-	LysR substrate binding domain
PAKDJCJJ_01214	9.83e-37	-	-	-	-	-	-	-	-
PAKDJCJJ_01215	3.81e-129	-	-	-	K	-	-	-	DNA-templated transcription, initiation
PAKDJCJJ_01216	3.57e-260	-	-	-	-	-	-	-	-
PAKDJCJJ_01217	1.24e-86	-	-	-	-	-	-	-	-
PAKDJCJJ_01218	7.36e-74	-	-	-	-	-	-	-	-
PAKDJCJJ_01219	4.9e-246	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
PAKDJCJJ_01220	1.18e-141	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAKDJCJJ_01221	7.15e-198	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAKDJCJJ_01222	2.29e-144	thiE	2.5.1.3	-	H	ko:K00788	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PAKDJCJJ_01223	1.68e-189	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
PAKDJCJJ_01224	3.64e-177	thiM	2.7.1.50	-	H	ko:K00878	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PAKDJCJJ_01225	5.94e-134	yneD	-	-	S	-	-	-	Enoyl-(Acyl carrier protein) reductase
PAKDJCJJ_01226	2.26e-166	yjkA	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
PAKDJCJJ_01227	6.15e-153	ybbL	-	-	S	ko:K02068	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAKDJCJJ_01228	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PAKDJCJJ_01229	2.14e-96	-	-	-	-	-	-	-	-
PAKDJCJJ_01230	1.22e-113	rmeB	-	-	K	-	-	-	transcriptional regulator, MerR family
PAKDJCJJ_01231	2.01e-123	-	-	-	J	-	-	-	glyoxalase III activity
PAKDJCJJ_01232	2.4e-177	XK27_00890	-	-	S	ko:K08974	-	ko00000	Domain of unknown function (DUF368)
PAKDJCJJ_01233	7.74e-173	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PAKDJCJJ_01234	6.97e-284	xylR	-	-	GK	-	-	-	ROK family
PAKDJCJJ_01235	4.04e-204	-	-	-	C	-	-	-	Aldo keto reductase
PAKDJCJJ_01236	5.68e-316	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
PAKDJCJJ_01237	0.0	cpdB	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
PAKDJCJJ_01238	1.9e-164	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
PAKDJCJJ_01239	7.12e-226	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
PAKDJCJJ_01240	0.0	pepF2	-	-	E	-	-	-	Oligopeptidase F
PAKDJCJJ_01241	9.09e-97	-	-	-	K	-	-	-	Transcriptional regulator
PAKDJCJJ_01242	1.86e-210	-	-	-	-	-	-	-	-
PAKDJCJJ_01243	7.7e-254	-	-	-	S	-	-	-	DUF218 domain
PAKDJCJJ_01244	0.0	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
PAKDJCJJ_01245	2.82e-203	nanK	-	-	GK	-	-	-	ROK family
PAKDJCJJ_01246	0.0	-	-	-	E	-	-	-	Amino acid permease
PAKDJCJJ_01247	0.0	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
PAKDJCJJ_01248	4.26e-23	-	-	-	S	-	-	-	SEC-C Motif Domain Protein
PAKDJCJJ_01249	6.65e-269	-	-	-	S	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
PAKDJCJJ_01251	8.74e-69	-	-	-	-	-	-	-	-
PAKDJCJJ_01252	1.93e-101	-	-	-	K	ko:K06075	-	ko00000,ko03000	Winged helix DNA-binding domain
PAKDJCJJ_01253	5.64e-144	nnrE	5.1.99.6	-	H	ko:K17759	-	ko00000,ko01000	Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX
PAKDJCJJ_01254	7.67e-135	aad	3.4.13.22	-	E	ko:K08641	ko01502,ko02020,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
PAKDJCJJ_01255	5.95e-147	-	-	-	-	-	-	-	-
PAKDJCJJ_01256	2.94e-236	yxeI	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PAKDJCJJ_01257	1.34e-109	lytE	-	-	M	-	-	-	NlpC P60 family
PAKDJCJJ_01260	1.63e-260	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAKDJCJJ_01266	1.1e-134	-	-	-	L	-	-	-	Bifunctional DNA primase/polymerase, N-terminal
PAKDJCJJ_01267	3.17e-63	-	-	-	S	-	-	-	Virulence-associated protein E
PAKDJCJJ_01268	1.38e-43	ywtF_2	-	-	K	-	-	-	Cell envelope-related transcriptional attenuator domain
PAKDJCJJ_01269	6.08e-179	-	-	-	P	ko:K02049	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PAKDJCJJ_01270	4.71e-189	-	-	-	P	ko:K02050	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAKDJCJJ_01271	6.03e-204	-	-	-	P	ko:K02050	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAKDJCJJ_01272	1.8e-289	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Cell cycle protein
PAKDJCJJ_01273	7.67e-124	-	-	-	-	-	-	-	-
PAKDJCJJ_01275	4.28e-93	-	4.4.1.5	-	E	ko:K01759	ko00620,map00620	ko00000,ko00001,ko01000	Glyoxalase
PAKDJCJJ_01276	6.12e-184	-	-	-	S	-	-	-	Membrane
PAKDJCJJ_01277	8.46e-239	tdh	1.1.1.14	-	C	ko:K00008	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko00002,ko01000	Zinc-binding dehydrogenase
PAKDJCJJ_01278	1.81e-221	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
PAKDJCJJ_01279	3.55e-99	-	-	-	-	-	-	-	-
PAKDJCJJ_01280	2.25e-260	gldA	1.1.1.6	-	C	ko:K00005	ko00561,ko00640,ko01100,map00561,map00640,map01100	ko00000,ko00001,ko01000	dehydrogenase
PAKDJCJJ_01281	6.92e-73	ykkC	-	-	P	ko:K18924	-	ko00000,ko00002,ko02000	Small Multidrug Resistance protein
PAKDJCJJ_01282	2.19e-67	ykkD	-	-	P	ko:K18925	-	ko00000,ko00002,ko02000	Multidrug resistance protein
PAKDJCJJ_01283	8.42e-138	yokL3	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PAKDJCJJ_01284	8.63e-188	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
PAKDJCJJ_01286	0.0	treP	2.4.1.64	GH65	G	ko:K05342	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
PAKDJCJJ_01287	7.09e-251	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PAKDJCJJ_01288	0.0	xylP2	-	-	G	-	-	-	symporter
PAKDJCJJ_01290	4.23e-21	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
PAKDJCJJ_01291	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
PAKDJCJJ_01292	2.96e-106	-	-	-	-	-	-	-	-
PAKDJCJJ_01294	7.38e-228	cytR	-	-	K	ko:K02529,ko:K03604	-	ko00000,ko03000	Transcriptional regulator, LacI family
PAKDJCJJ_01295	0.0	-	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
PAKDJCJJ_01296	0.0	-	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
PAKDJCJJ_01297	2.41e-150	-	-	-	-	-	-	-	-
PAKDJCJJ_01298	1.69e-97	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PAKDJCJJ_01299	8.19e-287	-	-	-	C	-	-	-	Oxidoreductase
PAKDJCJJ_01301	5.89e-90	-	-	-	K	-	-	-	Transcriptional regulator, HxlR family
PAKDJCJJ_01302	4.07e-271	mccF	-	-	V	-	-	-	LD-carboxypeptidase
PAKDJCJJ_01303	6.88e-229	-	3.2.2.1, 3.2.2.8	-	F	ko:K01239,ko:K10213	ko00230,ko00240,ko00760,ko01100,map00230,map00240,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
PAKDJCJJ_01304	6.64e-162	-	-	-	K	ko:K16326	-	ko00000,ko03000	Cyclic nucleotide-monophosphate binding domain
PAKDJCJJ_01305	6.25e-221	yeaB	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PAKDJCJJ_01306	1.64e-283	dhaT	1.1.1.202	-	C	ko:K00086	ko00561,ko00640,map00561,map00640	ko00000,ko00001,ko01000	Dehydrogenase
PAKDJCJJ_01307	6.94e-175	-	3.8.1.2	-	S	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
PAKDJCJJ_01308	1.47e-157	-	-	-	S	ko:K15770	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	GyrI-like small molecule binding domain
PAKDJCJJ_01309	6.84e-90	-	-	-	S	-	-	-	Protein of unknown function (DUF1398)
PAKDJCJJ_01310	1.19e-129	-	-	-	S	ko:K06910	-	ko00000	Phosphatidylethanolamine-binding protein
PAKDJCJJ_01311	2.68e-287	-	-	-	U	-	-	-	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PAKDJCJJ_01312	5.66e-159	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAKDJCJJ_01313	7.99e-233	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
PAKDJCJJ_01314	8.39e-114	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAKDJCJJ_01315	1.22e-272	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PAKDJCJJ_01316	1.93e-108	thiW	-	-	S	-	-	-	Thiamine-precursor transporter protein (ThiW)
PAKDJCJJ_01317	4.7e-215	mleP2	-	-	S	ko:K07088	-	ko00000	Sodium Bile acid symporter family
PAKDJCJJ_01318	0.0	mleS	1.1.1.38, 4.1.1.101	-	C	ko:K00027,ko:K22212	ko00620,ko01120,ko01200,ko02020,map00620,map01120,map01200,map02020	ko00000,ko00001,ko01000	Malic enzyme
PAKDJCJJ_01319	3.19e-208	mleR	-	-	K	-	-	-	LysR family
PAKDJCJJ_01320	5.9e-191	-	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
PAKDJCJJ_01321	1.01e-276	aguA2	3.5.3.12	-	E	ko:K10536	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko01000	agmatine deiminase
PAKDJCJJ_01322	2.85e-216	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
PAKDJCJJ_01323	8.96e-277	aguA	3.5.3.12	-	E	ko:K10536	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko01000	agmatine deiminase
PAKDJCJJ_01324	1.81e-307	aguD	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	Amino Acid
PAKDJCJJ_01325	6.83e-252	ptcA	2.1.3.6	-	E	ko:K13252	-	ko00000,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PAKDJCJJ_01326	4.46e-311	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
PAKDJCJJ_01327	0.0	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	Amino acid permease
PAKDJCJJ_01328	0.0	tdc	4.1.1.25	-	E	ko:K22330	ko00350,map00350	ko00000,ko00001,ko01000	Pyridoxal-dependent decarboxylase conserved domain
PAKDJCJJ_01329	9.95e-306	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PAKDJCJJ_01330	3.28e-52	-	-	-	-	-	-	-	-
PAKDJCJJ_01333	2.17e-267	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
PAKDJCJJ_01334	2.63e-36	-	-	-	-	-	-	-	-
PAKDJCJJ_01335	6.14e-202	-	-	-	EG	-	-	-	EamA-like transporter family
PAKDJCJJ_01336	0.0	abfA	3.2.1.55	GH51	G	ko:K01209	ko00520,map00520	ko00000,ko00001,ko01000	Alpha-L-arabinofuranosidase C-terminus
PAKDJCJJ_01337	2.5e-52	-	-	-	-	-	-	-	-
PAKDJCJJ_01338	7.18e-43	-	-	-	S	-	-	-	Transglycosylase associated protein
PAKDJCJJ_01339	4.68e-09	-	-	-	S	-	-	-	Protein of unknown function (DUF2992)
PAKDJCJJ_01340	6.85e-140	-	-	-	L	-	-	-	Bacterial dnaA protein
PAKDJCJJ_01341	1.02e-219	-	-	-	L	-	-	-	Integrase core domain
PAKDJCJJ_01342	1.7e-154	-	-	-	S	-	-	-	Elongation factor G-binding protein, N-terminal
PAKDJCJJ_01344	0.0	ykpA	-	-	S	-	-	-	ABC transporter, ATP-binding protein
PAKDJCJJ_01345	2.83e-202	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PAKDJCJJ_01346	3.26e-225	-	-	-	L	-	-	-	Initiator Replication protein
PAKDJCJJ_01347	4.87e-120	-	-	-	S	-	-	-	Protein of unknown function, DUF536
PAKDJCJJ_01348	1.38e-45	-	-	-	-	-	-	-	-
PAKDJCJJ_01349	1.58e-81	-	-	-	-	-	-	-	-
PAKDJCJJ_01350	1.43e-74	-	-	-	L	ko:K07487	-	ko00000	Transposase
PAKDJCJJ_01351	5.4e-83	dinF	-	-	V	-	-	-	MatE
PAKDJCJJ_01352	3.44e-139	-	-	-	S	-	-	-	HAD hydrolase, family IA, variant
PAKDJCJJ_01353	2.17e-70	levD	2.7.1.191, 2.7.1.202	-	G	ko:K02793,ko:K02794,ko:K11194	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
PAKDJCJJ_01354	7.01e-78	manX	2.7.1.191, 2.7.1.202	-	G	ko:K02769,ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko01120,ko02060,map00051,map00520,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
PAKDJCJJ_01355	2.54e-172	manM	-	-	G	ko:K02746,ko:K02795	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system
PAKDJCJJ_01356	4.33e-196	manN	-	-	G	ko:K02796,ko:K02815	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	system, mannose fructose sorbose family IID component
PAKDJCJJ_01357	1.59e-225	ydbI	-	-	K	-	-	-	AI-2E family transporter
PAKDJCJJ_01358	2.69e-202	-	-	-	T	-	-	-	diguanylate cyclase
PAKDJCJJ_01359	5.69e-149	-	3.3.1.1	-	H	ko:K01251	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000,ko01009,ko04147	adenosylhomocysteinase activity
PAKDJCJJ_01361	6.75e-314	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
PAKDJCJJ_01362	9.84e-192	ymdB	-	-	S	ko:K02029,ko:K02030,ko:K09769	-	ko00000,ko00002,ko02000	YmdB-like protein
PAKDJCJJ_01363	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PAKDJCJJ_01364	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PAKDJCJJ_01365	2.62e-138	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PAKDJCJJ_01366	3.2e-241	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PAKDJCJJ_01367	9.73e-255	queA	2.4.99.17	-	J	ko:K07568	-	ko00000,ko01000,ko03016	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PAKDJCJJ_01368	6.46e-290	tgt	2.4.2.29	-	F	ko:K00773	-	ko00000,ko01000,ko03016	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PAKDJCJJ_01369	6.65e-52	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
PAKDJCJJ_01370	7.82e-231	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PAKDJCJJ_01371	1.83e-230	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
PAKDJCJJ_01372	0.0	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PAKDJCJJ_01373	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PAKDJCJJ_01374	1.94e-59	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
PAKDJCJJ_01375	7.07e-97	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PAKDJCJJ_01376	2.47e-68	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
PAKDJCJJ_01377	1.62e-53	-	-	-	D	ko:K09888	-	ko00000,ko03036	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PAKDJCJJ_01378	2.58e-115	cvpA	-	-	S	-	-	-	Colicin V production protein
PAKDJCJJ_01379	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PAKDJCJJ_01380	6.22e-72	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
PAKDJCJJ_01381	1.77e-120	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
PAKDJCJJ_01382	3.54e-191	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
PAKDJCJJ_01383	2.53e-139	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PAKDJCJJ_01384	3.07e-129	ysnB	-	-	S	ko:K07095	-	ko00000	Phosphoesterase
PAKDJCJJ_01385	2.88e-111	ykuL	-	-	S	-	-	-	(CBS) domain
PAKDJCJJ_01387	1.12e-64	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
PAKDJCJJ_01388	7.41e-305	-	-	-	U	-	-	-	Major Facilitator Superfamily
PAKDJCJJ_01389	2.7e-199	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
PAKDJCJJ_01390	3.9e-82	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PAKDJCJJ_01391	1.38e-73	-	-	-	-	-	-	-	-
PAKDJCJJ_01392	2.45e-270	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
PAKDJCJJ_01393	1.23e-231	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
PAKDJCJJ_01394	3.3e-175	-	-	-	-	-	-	-	-
PAKDJCJJ_01395	3.4e-174	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PAKDJCJJ_01396	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
PAKDJCJJ_01397	1.68e-169	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
PAKDJCJJ_01398	1.87e-220	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
PAKDJCJJ_01399	2.6e-218	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
PAKDJCJJ_01400	1.61e-64	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	competence protein ComGC
PAKDJCJJ_01401	1.16e-106	-	-	-	-	-	-	-	-
PAKDJCJJ_01403	7.17e-99	-	-	-	-	ko:K02248	-	ko00000,ko00002,ko02044	-
PAKDJCJJ_01404	5.94e-238	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
PAKDJCJJ_01405	2.16e-282	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAKDJCJJ_01406	0.0	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
PAKDJCJJ_01407	1.15e-199	yeaE	-	-	S	-	-	-	Aldo keto
PAKDJCJJ_01408	6.48e-148	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
PAKDJCJJ_01409	0.0	yunD	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PAKDJCJJ_01410	2.6e-141	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
PAKDJCJJ_01411	6.64e-190	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PAKDJCJJ_01412	4.37e-154	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
PAKDJCJJ_01413	9.64e-119	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
PAKDJCJJ_01414	0.0	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
PAKDJCJJ_01415	0.0	-	-	-	M	-	-	-	domain protein
PAKDJCJJ_01416	0.0	-	-	-	E	ko:K03294	-	ko00000	Amino Acid
PAKDJCJJ_01417	1.75e-185	dhrS4	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Oxidoreductase, short chain dehydrogenase reductase family protein
PAKDJCJJ_01418	7.19e-27	ytbE	-	-	S	-	-	-	reductase
PAKDJCJJ_01419	1.19e-157	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
PAKDJCJJ_01420	2.63e-115	pgpA	3.1.3.27	-	I	ko:K01095	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Phosphatidylglycerophosphatase A
PAKDJCJJ_01421	4.07e-144	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PAKDJCJJ_01422	4.82e-94	yugI	-	-	J	ko:K07570,ko:K07571	-	ko00000	general stress protein
PAKDJCJJ_01423	9.94e-23	-	-	-	-	-	-	-	-
PAKDJCJJ_01424	1.96e-50	-	-	-	-	-	-	-	-
PAKDJCJJ_01426	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PAKDJCJJ_01427	5.75e-119	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PAKDJCJJ_01428	1.48e-289	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PAKDJCJJ_01429	2.79e-275	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
PAKDJCJJ_01430	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PAKDJCJJ_01431	7.76e-108	yebR	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
PAKDJCJJ_01432	2.08e-139	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PAKDJCJJ_01433	6.78e-81	-	-	-	KLT	-	-	-	serine threonine protein kinase
PAKDJCJJ_01434	6.01e-147	yktB	-	-	S	-	-	-	Belongs to the UPF0637 family
PAKDJCJJ_01435	1.3e-104	XK27_05190	-	-	S	-	-	-	Protein of unknown function (DUF1694)
PAKDJCJJ_01436	4.23e-306	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
PAKDJCJJ_01437	3.68e-55	-	-	-	-	-	-	-	-
PAKDJCJJ_01438	6.08e-107	uspA	-	-	T	-	-	-	universal stress protein
PAKDJCJJ_01439	5.48e-204	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PAKDJCJJ_01440	0.0	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Glycerophosphoryl diester phosphodiesterase family
PAKDJCJJ_01441	7.71e-277	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
PAKDJCJJ_01442	3.15e-229	-	-	-	S	-	-	-	Protein of unknown function (DUF2785)
PAKDJCJJ_01443	3.22e-185	-	-	-	O	-	-	-	Band 7 protein
PAKDJCJJ_01444	2.71e-66	gcsH2	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	glycine cleavage
PAKDJCJJ_01445	4.52e-282	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
PAKDJCJJ_01446	9.66e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
PAKDJCJJ_01447	1.11e-69	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
PAKDJCJJ_01448	9.73e-230	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
PAKDJCJJ_01449	5e-310	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PAKDJCJJ_01450	1.11e-45	ywzB	-	-	S	-	-	-	Protein of unknown function (DUF1146)
PAKDJCJJ_01451	4.49e-88	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
PAKDJCJJ_01452	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PAKDJCJJ_01453	1.07e-208	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PAKDJCJJ_01454	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PAKDJCJJ_01455	4.44e-117	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PAKDJCJJ_01456	3.81e-77	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PAKDJCJJ_01457	7.38e-37	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PAKDJCJJ_01458	1.55e-162	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
PAKDJCJJ_01459	1.3e-146	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PAKDJCJJ_01460	4.47e-295	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PAKDJCJJ_01461	4.74e-243	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PAKDJCJJ_01462	4.34e-200	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PAKDJCJJ_01463	2.77e-249	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PAKDJCJJ_01464	7.63e-143	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
PAKDJCJJ_01465	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Mur ligase, middle domain
PAKDJCJJ_01466	9.09e-173	cobQ	-	-	S	ko:K07009	-	ko00000	glutamine amidotransferase
PAKDJCJJ_01467	4.26e-251	ampC	-	-	V	-	-	-	Beta-lactamase
PAKDJCJJ_01468	0.0	yfiC	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
PAKDJCJJ_01469	0.0	ycfI	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter, ATP-binding protein
PAKDJCJJ_01470	5.22e-75	-	-	-	-	-	-	-	-
PAKDJCJJ_01471	0.0	cidC	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
PAKDJCJJ_01472	3.54e-73	-	-	-	S	-	-	-	MazG nucleotide pyrophosphohydrolase domain
PAKDJCJJ_01473	5.26e-238	-	-	-	S	-	-	-	nuclear-transcribed mRNA catabolic process, no-go decay
PAKDJCJJ_01475	8.8e-93	-	-	-	S	-	-	-	Domain of unknown function (DUF305)
PAKDJCJJ_01486	1.54e-180	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
PAKDJCJJ_01487	2.1e-65	-	-	-	N	ko:K18843	-	ko00000,ko02048	PFAM Uncharacterised protein family UPF0150
PAKDJCJJ_01488	8.55e-94	-	-	-	K	-	-	-	LytTr DNA-binding domain
PAKDJCJJ_01489	1.92e-102	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
PAKDJCJJ_01490	8.14e-120	entB	-	-	Q	-	-	-	Isochorismatase family
PAKDJCJJ_01491	2.25e-70	-	-	-	S	-	-	-	MazG nucleotide pyrophosphohydrolase domain
PAKDJCJJ_01492	6.62e-111	bioY	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	BioY family
PAKDJCJJ_01493	5.66e-186	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PAKDJCJJ_01494	3.13e-173	fabI	1.3.1.10, 1.3.1.9	-	I	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl- acyl-carrier-protein reductase NADH
PAKDJCJJ_01495	7.4e-178	accA	2.1.3.15, 6.4.1.2	-	I	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	alpha subunit
PAKDJCJJ_01496	9.5e-201	accD	2.1.3.15, 6.4.1.2	-	I	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PAKDJCJJ_01497	0.0	accC	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Acetyl-CoA carboxylase biotin carboxylase subunit
PAKDJCJJ_01498	2e-94	fabZ2	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	FabA-like domain
PAKDJCJJ_01499	2.05e-94	accB	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PAKDJCJJ_01500	8.3e-293	fabF	2.3.1.179	-	I	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PAKDJCJJ_01501	2.74e-157	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	reductase
PAKDJCJJ_01502	1.47e-213	fabD	2.3.1.39	-	I	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	Malonyl CoA-acyl carrier protein transacylase
PAKDJCJJ_01503	1.84e-49	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PAKDJCJJ_01504	3.29e-233	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PAKDJCJJ_01505	2.5e-104	-	-	-	K	-	-	-	Transcriptional regulator
PAKDJCJJ_01506	9.21e-99	fabZ	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PAKDJCJJ_01507	2.36e-19	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PAKDJCJJ_01508	2.13e-76	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PAKDJCJJ_01509	7.45e-182	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
PAKDJCJJ_01510	8.79e-120	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PAKDJCJJ_01511	6.46e-54	ylqC	-	-	S	ko:K06960	-	ko00000	Belongs to the UPF0109 family
PAKDJCJJ_01512	3.48e-58	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
PAKDJCJJ_01513	1.73e-63	-	-	-	-	-	-	-	-
PAKDJCJJ_01514	0.0	-	-	-	S	-	-	-	Putative metallopeptidase domain
PAKDJCJJ_01515	1.55e-272	-	-	-	S	-	-	-	associated with various cellular activities
PAKDJCJJ_01516	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
PAKDJCJJ_01517	1.42e-279	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PAKDJCJJ_01518	8.53e-76	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PAKDJCJJ_01519	1.64e-249	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PAKDJCJJ_01520	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
PAKDJCJJ_01521	5.47e-167	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PAKDJCJJ_01522	9.76e-50	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PAKDJCJJ_01523	1.11e-240	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PAKDJCJJ_01524	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PAKDJCJJ_01525	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
PAKDJCJJ_01526	1.43e-75	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
PAKDJCJJ_01527	4.64e-36	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
PAKDJCJJ_01528	6.29e-178	butA	1.1.1.304, 1.1.1.76	-	IQ	ko:K03366	ko00650,map00650	ko00000,ko00001,ko01000	reductase
PAKDJCJJ_01529	1.85e-42	-	-	-	L	-	-	-	Transposase
PAKDJCJJ_01531	8.93e-52	-	-	-	E	-	-	-	DNA primase activity
PAKDJCJJ_01533	1.52e-97	topB	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	Bacterial DNA topoisomeraes I ATP-binding domain
PAKDJCJJ_01535	9.74e-167	-	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	C-terminal, D2-small domain, of ClpB protein
PAKDJCJJ_01541	1.46e-132	-	-	-	U	ko:K03205	ko03070,map03070	ko00000,ko00001,ko00002,ko02044	TraM recognition site of TraD and TraG
PAKDJCJJ_01542	2.38e-31	-	-	-	T	-	-	-	PFAM SpoVT AbrB
PAKDJCJJ_01543	1.52e-44	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
PAKDJCJJ_01544	8.78e-15	-	-	-	K	-	-	-	Helix-turn-helix domain
PAKDJCJJ_01550	3.69e-127	-	-	-	U	-	-	-	type IV secretory pathway VirB4
PAKDJCJJ_01553	8.13e-146	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
PAKDJCJJ_01554	7.9e-122	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PAKDJCJJ_01555	5.84e-218	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
PAKDJCJJ_01556	4.21e-55	-	-	-	-	-	-	-	-
PAKDJCJJ_01557	9.43e-146	ytpR	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PAKDJCJJ_01558	1.33e-73	ytpP	-	-	CO	-	-	-	Thioredoxin
PAKDJCJJ_01559	3.29e-73	-	-	-	S	-	-	-	Small secreted protein
PAKDJCJJ_01560	2.4e-312	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
PAKDJCJJ_01561	5.48e-260	ald	1.4.1.1	-	C	ko:K00259	ko00250,ko00430,ko01100,map00250,map00430,map01100	ko00000,ko00001,ko01000	Belongs to the AlaDH PNT family
PAKDJCJJ_01562	1.85e-110	-	-	-	T	-	-	-	Belongs to the universal stress protein A family
PAKDJCJJ_01563	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
PAKDJCJJ_01564	1.89e-191	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PAKDJCJJ_01565	1.69e-161	-	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	pseudouridine synthase activity
PAKDJCJJ_01566	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
PAKDJCJJ_01567	2.16e-68	-	-	-	-	-	-	-	-
PAKDJCJJ_01568	2.41e-187	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
PAKDJCJJ_01569	7.15e-156	-	-	-	P	ko:K01990	-	ko00000,ko00002,ko02000	ABC-type multidrug transport system ATPase component
PAKDJCJJ_01570	2.28e-70	-	-	-	-	-	-	-	-
PAKDJCJJ_01571	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
PAKDJCJJ_01572	3.3e-151	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
PAKDJCJJ_01573	9.68e-134	ytqB	-	-	J	-	-	-	Putative rRNA methylase
PAKDJCJJ_01575	5.28e-213	yijG	-	GT2	M	ko:K11936	ko02026,map02026	ko00000,ko00001,ko01000,ko01003,ko02000	Glycosyl transferase
PAKDJCJJ_01576	2.9e-81	yijG	-	GT2	M	ko:K11936	ko02026,map02026	ko00000,ko00001,ko01000,ko01003,ko02000	Glycosyl transferase
PAKDJCJJ_01577	1.58e-116	-	-	-	-	-	-	-	-
PAKDJCJJ_01578	3.63e-130	-	-	-	T	-	-	-	EAL domain
PAKDJCJJ_01583	3.68e-58	-	-	-	T	-	-	-	Histidine kinase-like ATPases
PAKDJCJJ_01584	6.36e-157	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
PAKDJCJJ_01585	1.54e-95	-	-	-	-	-	-	-	-
PAKDJCJJ_01587	2.39e-184	soj	-	-	D	-	-	-	CobQ CobB MinD ParA nucleotide binding domain protein
PAKDJCJJ_01589	8.28e-44	-	-	-	-	-	-	-	-
PAKDJCJJ_01597	1.48e-72	-	-	-	L	ko:K07482	-	ko00000	Helix-turn-helix domain
PAKDJCJJ_01598	2.78e-12	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PAKDJCJJ_01599	6.2e-76	-	-	-	L	-	-	-	recombinase activity
PAKDJCJJ_01600	2.16e-43	-	-	-	-	-	-	-	-
PAKDJCJJ_01602	3.02e-19	-	-	-	-	-	-	-	-
PAKDJCJJ_01611	2.45e-23	-	-	-	S	-	-	-	Bacteriophage Mu Gam like protein
PAKDJCJJ_01612	5.17e-59	-	-	-	S	-	-	-	ERF superfamily
PAKDJCJJ_01613	5.85e-69	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PAKDJCJJ_01614	1.18e-39	-	-	-	L	-	-	-	NUMOD4 motif
PAKDJCJJ_01615	7.64e-129	-	-	-	S	-	-	-	Putative HNHc nuclease
PAKDJCJJ_01616	1.78e-18	-	-	-	L	-	-	-	HNH endonuclease
PAKDJCJJ_01617	5.07e-80	-	-	-	L	-	-	-	DnaD domain protein
PAKDJCJJ_01618	1.01e-88	-	-	-	L	ko:K02315	-	ko00000,ko03032	IstB-like ATP binding protein
PAKDJCJJ_01623	3.95e-09	-	-	-	S	-	-	-	YopX protein
PAKDJCJJ_01627	4.75e-64	-	-	-	S	-	-	-	Transcriptional regulator, RinA family
PAKDJCJJ_01629	1.2e-96	-	-	-	S	-	-	-	Putative ATPase subunit of terminase (gpP-like)
PAKDJCJJ_01630	2.98e-304	-	-	-	S	-	-	-	Terminase-like family
PAKDJCJJ_01632	0.0	-	-	-	S	-	-	-	Phage portal protein, SPP1 Gp6-like
PAKDJCJJ_01633	2.69e-97	-	-	-	S	-	-	-	Phage Mu protein F like protein
PAKDJCJJ_01634	7.47e-70	-	-	-	S	-	-	-	Domain of unknown function (DUF4355)
PAKDJCJJ_01635	7.05e-229	gpG	-	-	-	-	-	-	-
PAKDJCJJ_01637	1.5e-74	-	-	-	-	-	-	-	-
PAKDJCJJ_01645	0.0	-	-	-	M	-	-	-	tape measure
PAKDJCJJ_01646	4.74e-76	-	-	-	M	-	-	-	LysM domain
PAKDJCJJ_01648	3.54e-169	-	-	-	-	-	-	-	-
PAKDJCJJ_01649	4.64e-54	-	-	-	-	-	-	-	-
PAKDJCJJ_01651	1.4e-226	-	-	-	S	-	-	-	Baseplate J-like protein
PAKDJCJJ_01653	5.72e-82	-	-	-	-	-	-	-	-
PAKDJCJJ_01656	1.9e-51	-	-	-	-	-	-	-	-
PAKDJCJJ_01657	7.16e-94	-	-	-	M	-	-	-	hydrolase, family 25
PAKDJCJJ_01659	2.62e-35	-	-	-	-	-	-	-	-
PAKDJCJJ_01660	8.89e-146	-	-	-	D	-	-	-	AAA domain
PAKDJCJJ_01661	6.89e-75	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
PAKDJCJJ_01662	2.72e-51	yrkD	-	-	S	-	-	-	Metal-sensitive transcriptional repressor
PAKDJCJJ_01663	3.13e-86	crcB1	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PAKDJCJJ_01664	2.22e-78	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PAKDJCJJ_01665	8.33e-193	-	-	-	-	-	-	-	-
PAKDJCJJ_01666	1.42e-210	-	-	-	I	-	-	-	Carboxylesterase family
PAKDJCJJ_01667	1.44e-113	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PAKDJCJJ_01668	2.67e-209	-	-	-	-	-	-	-	-
PAKDJCJJ_01669	0.0	pts14C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAKDJCJJ_01670	1.08e-216	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
PAKDJCJJ_01671	3.06e-201	lysR5	-	-	K	-	-	-	LysR substrate binding domain
PAKDJCJJ_01672	1.26e-182	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
PAKDJCJJ_01673	8.44e-75	-	-	-	S	-	-	-	Protein of unknown function (DUF1634)
PAKDJCJJ_01674	7.15e-179	-	-	-	IQ	-	-	-	Oxidoreductase, short chain dehydrogenase reductase family protein
PAKDJCJJ_01675	1.56e-294	mdtG	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
PAKDJCJJ_01676	7.03e-22	-	-	-	T	-	-	-	Region found in RelA / SpoT proteins
PAKDJCJJ_01677	2.11e-68	ywaC	2.7.6.5	-	S	ko:K00951,ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
PAKDJCJJ_01678	2.36e-38	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
PAKDJCJJ_01679	2.46e-229	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PAKDJCJJ_01681	0.0	-	-	-	S	-	-	-	membrane
PAKDJCJJ_01682	4.29e-160	ciaR	-	-	K	ko:K14983	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	cheY-homologous receiver domain
PAKDJCJJ_01683	5.25e-313	ciaH	2.7.13.3	-	T	ko:K14982	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	His Kinase A (phosphoacceptor) domain
PAKDJCJJ_01684	3.99e-231	malR1	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator, LacI family
PAKDJCJJ_01685	0.0	malT	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
PAKDJCJJ_01686	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
PAKDJCJJ_01687	1.8e-99	-	-	-	-	-	-	-	-
PAKDJCJJ_01688	4.82e-55	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PAKDJCJJ_01689	1.12e-191	galM1	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
PAKDJCJJ_01690	7.29e-208	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
PAKDJCJJ_01691	2.81e-137	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PAKDJCJJ_01692	1.7e-84	-	-	-	K	-	-	-	MarR family
PAKDJCJJ_01693	0.0	-	-	-	M	-	-	-	Parallel beta-helix repeats
PAKDJCJJ_01694	2.3e-96	-	-	-	P	-	-	-	ArsC family
PAKDJCJJ_01695	1.5e-183	lytE	-	-	M	-	-	-	NlpC/P60 family
PAKDJCJJ_01696	2.14e-60	-	-	-	K	-	-	-	acetyltransferase
PAKDJCJJ_01697	7.16e-40	-	-	-	K	-	-	-	acetyltransferase
PAKDJCJJ_01698	0.0	-	-	-	E	-	-	-	dipeptidase activity
PAKDJCJJ_01699	3.64e-122	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
PAKDJCJJ_01700	3.04e-26	-	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
PAKDJCJJ_01701	3.25e-99	-	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
PAKDJCJJ_01702	4.24e-288	-	-	-	G	-	-	-	Major Facilitator
PAKDJCJJ_01703	2.95e-260	-	3.2.1.37	GH43	G	ko:K01198	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
PAKDJCJJ_01704	1.53e-102	-	3.2.1.37	GH43	G	ko:K01198	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
PAKDJCJJ_01705	5.06e-162	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PAKDJCJJ_01706	1.22e-171	fabG1	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PAKDJCJJ_01707	6.61e-196	-	-	-	GM	-	-	-	NmrA-like family
PAKDJCJJ_01708	3.78e-95	-	-	-	K	-	-	-	Transcriptional regulator
PAKDJCJJ_01709	0.0	tagB	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	glycerophosphotransferase
PAKDJCJJ_01710	5.59e-221	-	-	-	-	-	-	-	-
PAKDJCJJ_01711	3.95e-82	ytcD	-	-	K	-	-	-	Transcriptional regulator, HxlR family
PAKDJCJJ_01712	1.24e-263	ytbD	-	-	EGP	ko:K19577	-	ko00000,ko02000	Major Facilitator
PAKDJCJJ_01713	1.51e-233	ydhF	-	-	S	-	-	-	Aldo keto reductase
PAKDJCJJ_01714	1.14e-175	cysA	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAKDJCJJ_01715	0.0	-	-	-	Q	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PAKDJCJJ_01716	5.55e-79	-	-	-	K	-	-	-	Transcriptional regulator, GntR family
PAKDJCJJ_01717	3.22e-90	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
PAKDJCJJ_01718	6.39e-262	-	-	-	M	-	-	-	Collagen binding domain
PAKDJCJJ_01719	0.0	cadA	-	-	P	-	-	-	P-type ATPase
PAKDJCJJ_01720	6.34e-156	-	-	-	S	-	-	-	SNARE associated Golgi protein
PAKDJCJJ_01721	0.0	sufI	-	-	Q	-	-	-	Multicopper oxidase
PAKDJCJJ_01722	1.43e-69	czrA	-	-	K	ko:K22043	-	ko00000,ko03000	Transcriptional regulator, ArsR family
PAKDJCJJ_01723	3.78e-133	cadD	-	-	P	-	-	-	Cadmium resistance transporter
PAKDJCJJ_01724	7.01e-211	-	-	-	S	-	-	-	Conserved hypothetical protein 698
PAKDJCJJ_01725	1.49e-197	-	-	-	K	-	-	-	LysR substrate binding domain
PAKDJCJJ_01726	5.37e-258	blt	-	-	EGP	ko:K08153	-	ko00000,ko00002,ko02000	transporter
PAKDJCJJ_01727	0.0	traA	-	-	L	-	-	-	MobA MobL family protein
PAKDJCJJ_01729	3.99e-95	-	-	-	-	-	-	-	-
PAKDJCJJ_01730	8.96e-68	-	-	-	S	-	-	-	Cag pathogenicity island, type IV secretory system
PAKDJCJJ_01731	8.94e-70	-	-	-	-	-	-	-	-
PAKDJCJJ_01732	3.68e-151	-	-	-	-	-	-	-	-
PAKDJCJJ_01733	0.0	-	-	-	U	-	-	-	AAA-like domain
PAKDJCJJ_01734	3.79e-296	-	-	-	S	-	-	-	WXG100 protein secretion system (Wss), protein YukC
PAKDJCJJ_01735	6.46e-208	-	-	-	M	-	-	-	CHAP domain
PAKDJCJJ_01736	1.08e-76	-	-	-	-	-	-	-	-
PAKDJCJJ_01737	9.67e-59	-	-	-	CO	-	-	-	COG0526, thiol-disulfide isomerase and thioredoxins
PAKDJCJJ_01738	3.88e-87	-	-	-	-	-	-	-	-
PAKDJCJJ_01739	9.16e-295	traK	-	-	U	ko:K03205	ko03070,map03070	ko00000,ko00001,ko00002,ko02044	TraM recognition site of TraD and TraG
PAKDJCJJ_01741	6.64e-95	-	-	-	-	-	-	-	-
PAKDJCJJ_01742	1.69e-38	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
PAKDJCJJ_01743	1e-207	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
PAKDJCJJ_01744	2.08e-133	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PAKDJCJJ_01745	3.75e-98	-	-	-	K	-	-	-	LytTr DNA-binding domain
PAKDJCJJ_01746	1.04e-159	-	-	-	S	-	-	-	membrane
PAKDJCJJ_01748	3.44e-139	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
PAKDJCJJ_01750	2.32e-236	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	Putative sugar-binding domain
PAKDJCJJ_01751	8.53e-245	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PAKDJCJJ_01752	7.88e-287	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
PAKDJCJJ_01753	5.46e-179	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PAKDJCJJ_01754	2.84e-316	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PAKDJCJJ_01756	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
PAKDJCJJ_01757	1.06e-44	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
PAKDJCJJ_01758	3.69e-181	est	3.1.1.1	-	S	ko:K03928	-	ko00000,ko01000	Serine aminopeptidase, S33
PAKDJCJJ_01759	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PAKDJCJJ_01760	4.3e-106	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PAKDJCJJ_01761	1.18e-169	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PAKDJCJJ_01762	2.56e-134	-	-	-	-	-	-	-	-
PAKDJCJJ_01763	2.24e-180	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PAKDJCJJ_01764	4.83e-229	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
PAKDJCJJ_01765	7.73e-109	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
PAKDJCJJ_01766	1.15e-115	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PAKDJCJJ_01767	8.93e-249	tas3	-	-	C	ko:K19265	-	ko00000,ko01000	Aldo keto reductase family protein
PAKDJCJJ_01768	6.15e-132	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
PAKDJCJJ_01769	4.71e-194	exoA	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
PAKDJCJJ_01770	9.51e-210	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
PAKDJCJJ_01771	0.0	yvgP	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
PAKDJCJJ_01772	1.34e-158	-	-	-	S	-	-	-	Protein of unknown function (DUF1361)
PAKDJCJJ_01773	5.67e-196	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PAKDJCJJ_01774	1.32e-193	ybbR	-	-	S	-	-	-	YbbR-like protein
PAKDJCJJ_01775	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PAKDJCJJ_01776	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PAKDJCJJ_01777	3.46e-18	-	-	-	-	-	-	-	-
PAKDJCJJ_01778	1.05e-165	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PAKDJCJJ_01779	0.0	-	-	CBM50	NU	ko:K02395,ko:K19223	-	ko00000,ko01000,ko01002,ko01011,ko02035	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PAKDJCJJ_01780	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	P-type ATPase
PAKDJCJJ_01781	1.88e-122	dpsB	-	-	P	-	-	-	Belongs to the Dps family
PAKDJCJJ_01782	2.98e-45	copZ	-	-	P	-	-	-	Heavy-metal-associated domain
PAKDJCJJ_01783	1.34e-256	tagH	3.6.3.40	-	GM	ko:K09693	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
PAKDJCJJ_01784	3.81e-67	-	-	-	-	-	-	-	-
PAKDJCJJ_01785	1.2e-130	-	-	-	S	-	-	-	Iron Transport-associated domain
PAKDJCJJ_01786	4.27e-257	-	-	-	M	-	-	-	Iron Transport-associated domain
PAKDJCJJ_01787	9.62e-154	-	-	-	M	ko:K14193	ko05150,map05150	ko00000,ko00001	Iron Transport-associated domain
PAKDJCJJ_01788	1.12e-209	isdE	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
PAKDJCJJ_01789	8.57e-222	isdF	-	-	U	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PAKDJCJJ_01790	3.16e-182	fepC	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PAKDJCJJ_01791	8.23e-219	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
PAKDJCJJ_01792	0.0	ppk	2.7.4.1	-	P	ko:K00937	ko00190,ko03018,map00190,map03018	ko00000,ko00001,ko01000,ko03019	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PAKDJCJJ_01793	0.0	ppx3	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
PAKDJCJJ_01794	1.51e-195	-	-	-	M	ko:K07271	-	ko00000,ko01000	LicD family
PAKDJCJJ_01795	1.91e-116	-	-	-	S	-	-	-	Domain of unknown function (DUF5067)
PAKDJCJJ_01796	8.55e-99	-	-	-	K	-	-	-	Transcriptional regulator
PAKDJCJJ_01797	2.39e-34	-	-	-	-	-	-	-	-
PAKDJCJJ_01798	3.21e-104	-	-	-	O	-	-	-	OsmC-like protein
PAKDJCJJ_01799	2.26e-33	-	-	-	-	-	-	-	-
PAKDJCJJ_01801	1.47e-74	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
PAKDJCJJ_01802	7.33e-115	-	-	-	-	-	-	-	-
PAKDJCJJ_01803	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PAKDJCJJ_01804	0.0	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Peptidase dimerisation domain
PAKDJCJJ_01805	5.33e-119	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PAKDJCJJ_01806	3.14e-130	-	-	-	S	-	-	-	Putative glutamine amidotransferase
PAKDJCJJ_01807	3.02e-80	-	-	-	S	ko:K09936	ko02024,map02024	ko00000,ko00001,ko02000	protein conserved in bacteria
PAKDJCJJ_01808	1.43e-188	-	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolases, choloylglycine hydrolase family
PAKDJCJJ_01809	1.79e-81	-	-	-	S	ko:K09936	ko02024,map02024	ko00000,ko00001,ko02000	protein conserved in bacteria
PAKDJCJJ_01811	9.73e-37	-	-	-	-	-	-	-	-
PAKDJCJJ_01812	5.78e-47	-	-	-	-	-	-	-	-
PAKDJCJJ_01814	1.45e-102	-	-	-	S	-	-	-	Protein of unknown function (DUF1064)
PAKDJCJJ_01816	8.95e-33	-	-	-	S	-	-	-	YopX protein
PAKDJCJJ_01817	9.01e-112	-	-	-	L	-	-	-	C-5 cytosine-specific DNA methylase
PAKDJCJJ_01819	3.84e-169	-	-	-	S	-	-	-	Putative HNHc nuclease
PAKDJCJJ_01820	8.45e-92	-	-	-	-	-	-	-	-
PAKDJCJJ_01821	2.56e-290	-	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	DnaB-like helicase C terminal domain
PAKDJCJJ_01822	1.83e-180	-	-	-	L	-	-	-	Helix-turn-helix domain
PAKDJCJJ_01824	1.21e-130	-	-	-	S	-	-	-	Protein of unknown function (DUF669)
PAKDJCJJ_01825	1.05e-161	-	-	-	S	-	-	-	AAA domain
PAKDJCJJ_01826	6.65e-186	-	-	-	S	-	-	-	Protein of unknown function (DUF1351)
PAKDJCJJ_01828	0.000773	-	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
PAKDJCJJ_01833	5.27e-151	-	-	-	K	-	-	-	ORF6N domain
PAKDJCJJ_01835	5.1e-17	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PAKDJCJJ_01837	5.2e-34	-	-	-	-	-	-	-	-
PAKDJCJJ_01838	1.56e-178	-	-	-	S	-	-	-	Domain of unknown function (DUF4393)
PAKDJCJJ_01840	0.0	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAKDJCJJ_01841	4.12e-168	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PAKDJCJJ_01842	3.6e-92	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PAKDJCJJ_01843	5.25e-178	yhfI	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
PAKDJCJJ_01844	3.62e-121	traP	1.14.99.57	-	S	ko:K21481	-	ko00000,ko01000	enzyme involved in biosynthesis of extracellular polysaccharides
PAKDJCJJ_01845	5.03e-299	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
PAKDJCJJ_01847	0.0	gadB	4.1.1.15, 4.1.2.27	-	E	ko:K01580,ko:K01634	ko00250,ko00410,ko00430,ko00600,ko00650,ko01100,ko01110,ko01120,ko02024,ko04071,ko04727,ko04940,map00250,map00410,map00430,map00600,map00650,map01100,map01110,map01120,map02024,map04071,map04727,map04940	ko00000,ko00001,ko00002,ko01000	Belongs to the group II decarboxylase family
PAKDJCJJ_01848	7.93e-91	yqeB	-	-	S	-	-	-	Pyrimidine dimer DNA glycosylase
PAKDJCJJ_01849	1.42e-85	-	-	-	S	-	-	-	Protein of unknown function (DUF1722)
PAKDJCJJ_01850	2.52e-196	-	-	-	C	-	-	-	Aldo keto reductase
PAKDJCJJ_01851	7.25e-206	yitS	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
PAKDJCJJ_01852	0.0	-	-	-	S	-	-	-	Putative threonine/serine exporter
PAKDJCJJ_01853	3.6e-168	sip	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAKDJCJJ_01854	7.91e-22	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
PAKDJCJJ_01855	1.34e-15	-	-	-	-	-	-	-	-
PAKDJCJJ_01856	1.67e-87	-	-	-	S	-	-	-	Phage regulatory protein Rha (Phage_pRha)
PAKDJCJJ_01860	1.63e-12	-	-	-	-	-	-	-	-
PAKDJCJJ_01861	9.9e-87	-	-	-	L	-	-	-	Primase C terminal 1 (PriCT-1)
PAKDJCJJ_01862	7.78e-196	-	-	-	S	-	-	-	Virulence-associated protein E
PAKDJCJJ_01867	1.75e-60	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
PAKDJCJJ_01868	7.34e-69	-	-	-	K	-	-	-	LytTr DNA-binding domain
PAKDJCJJ_01870	3.11e-271	natB	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PAKDJCJJ_01871	2.1e-214	natA	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAKDJCJJ_01872	1.82e-316	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
PAKDJCJJ_01873	9.57e-36	-	-	-	-	-	-	-	-
PAKDJCJJ_01874	1.3e-239	ansB	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	Asparaginase
PAKDJCJJ_01875	2.69e-276	-	-	-	-	-	-	-	-
PAKDJCJJ_01876	3.56e-55	-	-	-	-	-	-	-	-
PAKDJCJJ_01878	1.59e-10	-	-	-	-	-	-	-	-
PAKDJCJJ_01879	4.78e-79	-	-	-	-	-	-	-	-
PAKDJCJJ_01880	5.69e-154	tenA	3.5.99.2	-	K	ko:K03707	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03000	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
PAKDJCJJ_01881	4.31e-149	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
PAKDJCJJ_01882	0.0	-	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
PAKDJCJJ_01883	1.8e-124	-	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC transporter permease
PAKDJCJJ_01884	5.98e-216	-	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PAKDJCJJ_01886	3.1e-70	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PAKDJCJJ_01887	2.6e-54	pduN	-	-	CQ	ko:K04028	-	ko00000	Ethanolamine utilisation protein EutN/carboxysome
PAKDJCJJ_01888	9.3e-166	namA	-	-	C	-	-	-	Oxidoreductase
PAKDJCJJ_01889	1.91e-263	-	-	-	EGP	-	-	-	Major Facilitator
PAKDJCJJ_01890	5.43e-259	-	-	-	EGP	-	-	-	Major Facilitator
PAKDJCJJ_01891	2.63e-204	dkgB	-	-	S	-	-	-	reductase
PAKDJCJJ_01892	1.1e-295	-	-	-	-	-	-	-	-
PAKDJCJJ_01894	5.81e-131	yobS	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAKDJCJJ_01895	2.05e-99	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PAKDJCJJ_01896	5.66e-105	yphH	-	-	S	-	-	-	Cupin domain
PAKDJCJJ_01897	1.64e-72	yphJ	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	decarboxylase
PAKDJCJJ_01898	1.25e-263	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
PAKDJCJJ_01899	6.44e-214	-	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	hydrolase, family 25
PAKDJCJJ_01900	1.11e-192	-	-	-	S	-	-	-	Zinc-dependent metalloprotease
PAKDJCJJ_01901	2.12e-136	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
PAKDJCJJ_01902	1.72e-267	sbcD	-	-	L	ko:K03547	-	ko00000,ko03400	SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PAKDJCJJ_01903	0.0	sbcC	-	-	L	ko:K03546	-	ko00000,ko03400	Putative exonuclease SbcCD, C subunit
PAKDJCJJ_01904	2.44e-244	pva2	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolases, choloylglycine hydrolase family
PAKDJCJJ_01905	0.0	-	3.2.1.21, 3.2.1.52	GH3	G	ko:K01207,ko:K05349	ko00460,ko00500,ko00520,ko00531,ko00940,ko01100,ko01110,ko01501,map00460,map00500,map00520,map00531,map00940,map01100,map01110,map01501	ko00000,ko00001,ko00002,ko01000	hydrolase, family 3
PAKDJCJJ_01907	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
PAKDJCJJ_01908	9.75e-131	tag2	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
PAKDJCJJ_01909	2.8e-188	-	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
PAKDJCJJ_01910	1.87e-248	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PAKDJCJJ_01911	2.02e-147	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PAKDJCJJ_01912	1.27e-226	-	-	-	EG	-	-	-	EamA-like transporter family
PAKDJCJJ_01913	1.49e-43	-	-	-	-	-	-	-	-
PAKDJCJJ_01914	7.22e-237	tas	-	-	C	-	-	-	Aldo/keto reductase family
PAKDJCJJ_01915	3.46e-87	-	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	glycine cleavage
PAKDJCJJ_01916	3.24e-250	-	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Lipoate-protein ligase
PAKDJCJJ_01917	2.56e-70	-	-	-	-	-	-	-	-
PAKDJCJJ_01918	0.0	-	-	-	M	-	-	-	domain, Protein
PAKDJCJJ_01919	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
PAKDJCJJ_01920	2.32e-282	mutY	-	-	L	ko:K03575	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	A G-specific adenine glycosylase
PAKDJCJJ_01921	2.63e-69	-	-	-	-	-	-	-	-
PAKDJCJJ_01922	1.47e-144	mhqD	-	-	S	ko:K06999	-	ko00000	Dienelactone hydrolase family
PAKDJCJJ_01923	2.32e-43	cspC	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
PAKDJCJJ_01924	3.1e-51	-	-	-	S	-	-	-	Cytochrome B5
PAKDJCJJ_01926	6.14e-45	-	-	-	-	-	-	-	-
PAKDJCJJ_01928	6.1e-160	yrkL	-	-	S	-	-	-	Flavodoxin-like fold
PAKDJCJJ_01929	8.02e-25	-	-	-	-	-	-	-	-
PAKDJCJJ_01930	9.11e-196	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
PAKDJCJJ_01931	1.12e-64	-	-	-	-	-	-	-	-
PAKDJCJJ_01932	3.08e-306	codA	3.5.4.1	-	F	ko:K01485	ko00240,ko00330,ko01100,map00240,map00330,map01100	ko00000,ko00001,ko01000	cytosine deaminase
PAKDJCJJ_01933	1.89e-110	-	-	-	-	-	-	-	-
PAKDJCJJ_01934	6.64e-190	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PAKDJCJJ_01935	6.33e-109	-	-	-	S	ko:K04750	-	ko00000	3-demethylubiquinone-9 3-methyltransferase
PAKDJCJJ_01936	3.21e-148	maa	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose O-acetyltransferase
PAKDJCJJ_01937	0.0	-	-	-	U	ko:K03451	-	ko00000	Belongs to the BCCT transporter (TC 2.A.15) family
PAKDJCJJ_01938	2.33e-103	-	-	-	T	-	-	-	Universal stress protein family
PAKDJCJJ_01939	1.28e-161	-	-	-	S	-	-	-	HAD-hyrolase-like
PAKDJCJJ_01940	1.01e-91	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
PAKDJCJJ_01941	3.32e-154	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
PAKDJCJJ_01942	4.89e-202	-	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
PAKDJCJJ_01943	4.18e-180	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PAKDJCJJ_01944	3.31e-195	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
PAKDJCJJ_01945	8.06e-33	-	-	-	-	-	-	-	-
PAKDJCJJ_01946	3.54e-316	-	-	-	EGP	-	-	-	Major Facilitator
PAKDJCJJ_01947	2.02e-106	-	-	-	S	-	-	-	ASCH
PAKDJCJJ_01948	0.0	-	-	-	EP	-	-	-	Psort location Cytoplasmic, score
PAKDJCJJ_01949	8.73e-162	-	-	-	S	-	-	-	DJ-1/PfpI family
PAKDJCJJ_01950	6.28e-73	-	-	-	K	-	-	-	Transcriptional
PAKDJCJJ_01951	5.72e-239	-	1.1.1.1	-	C	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	nadph quinone reductase
PAKDJCJJ_01952	1.74e-225	etfA	1.3.1.108	-	C	ko:K03522,ko:K22432	-	ko00000,ko01000,ko04147	Electron transfer flavoprotein FAD-binding domain
PAKDJCJJ_01953	3.03e-186	fixA	-	-	C	ko:K03521	-	ko00000	Electron transfer flavoprotein domain
PAKDJCJJ_01954	2.25e-265	-	1.3.8.1, 1.3.8.7	-	I	ko:K00248,ko:K00249,ko:K18244	ko00071,ko00280,ko00410,ko00640,ko00650,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map00650,map01100,map01110,map01120,map01130,map01200,map01212,map03320	ko00000,ko00001,ko00002,ko01000	Acyl-CoA dehydrogenase, C-terminal domain
PAKDJCJJ_01955	2.78e-252	galM1	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
PAKDJCJJ_01956	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PAKDJCJJ_01957	2.95e-50	-	-	-	-	-	-	-	-
PAKDJCJJ_01958	0.0	lacP	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
PAKDJCJJ_01959	5.28e-283	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PAKDJCJJ_01960	5.36e-247	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
PAKDJCJJ_01961	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
PAKDJCJJ_01962	3.73e-239	galR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
PAKDJCJJ_01964	5.1e-88	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PAKDJCJJ_01967	4.49e-179	XK27_08125	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
PAKDJCJJ_01968	8.43e-144	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PAKDJCJJ_01969	6.75e-157	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PAKDJCJJ_01970	1.1e-276	-	-	-	EGP	ko:K08196	-	ko00000,ko02000	Major Facilitator
PAKDJCJJ_01971	1.1e-171	-	-	-	S	-	-	-	Protein of unknown function
PAKDJCJJ_01972	1.49e-224	pepI	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
PAKDJCJJ_01973	1.31e-210	-	-	-	G	-	-	-	Belongs to the carbohydrate kinase PfkB family
PAKDJCJJ_01974	0.0	-	-	-	F	ko:K03457	-	ko00000	Belongs to the purine-cytosine permease (2.A.39) family
PAKDJCJJ_01975	1.41e-242	-	-	-	O	-	-	-	ADP-ribosylglycohydrolase
PAKDJCJJ_01976	2.48e-159	-	-	-	K	-	-	-	UTRA
PAKDJCJJ_01977	4.57e-201	yhaZ	-	-	L	-	-	-	DNA alkylation repair enzyme
PAKDJCJJ_01978	1.98e-162	-	-	-	F	-	-	-	glutamine amidotransferase
PAKDJCJJ_01979	0.0	fusA1	-	-	J	-	-	-	elongation factor G
PAKDJCJJ_01980	1.06e-297	-	-	-	EK	-	-	-	Aminotransferase, class I
PAKDJCJJ_01981	2.89e-175	-	1.1.1.53	-	IQ	ko:K00038	ko00140,ko01100,map00140,map01100	ko00000,ko00001,ko01000	reductase
PAKDJCJJ_01982	1.39e-128	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAKDJCJJ_01983	9.85e-96	-	-	-	S	-	-	-	COG NOG18757 non supervised orthologous group
PAKDJCJJ_01984	2.25e-191	pmrB	-	-	EGP	-	-	-	Major Facilitator Superfamily
PAKDJCJJ_01985	7.31e-55	pmrB	-	-	EGP	-	-	-	Major Facilitator Superfamily
PAKDJCJJ_01986	7.42e-150	lacA	2.3.1.18, 2.3.1.79	-	S	ko:K00633,ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
PAKDJCJJ_01987	2.4e-102	-	-	-	-	-	-	-	-
PAKDJCJJ_01988	4.83e-31	-	-	-	-	-	-	-	-
PAKDJCJJ_01989	1.11e-153	cah	4.2.1.1	-	P	ko:K01674	ko00910,map00910	ko00000,ko00001,ko01000	Eukaryotic-type carbonic anhydrase
PAKDJCJJ_01990	3.88e-285	-	-	-	LO	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
PAKDJCJJ_01991	1.72e-36	-	-	-	K	ko:K07729	-	ko00000,ko03000	Transcriptional
PAKDJCJJ_01992	6.68e-86	-	-	-	-	-	-	-	-
PAKDJCJJ_01993	0.0	-	-	-	M	-	-	-	MucBP domain
PAKDJCJJ_01994	7.02e-146	azo1	1.5.1.36, 1.7.1.6	-	S	ko:K03206,ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
PAKDJCJJ_01995	0.0	rtpR	1.17.4.2	-	F	ko:K00527	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	ribonucleoside-triphosphate reductase activity
PAKDJCJJ_01996	3.68e-119	-	-	-	S	-	-	-	Cob(I)alamin adenosyltransferase
PAKDJCJJ_01997	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
PAKDJCJJ_01998	2.64e-114	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PAKDJCJJ_01999	1.92e-11	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PAKDJCJJ_02000	1.93e-188	-	-	-	-	-	-	-	-
PAKDJCJJ_02001	2.11e-108	-	-	-	T	-	-	-	Belongs to the universal stress protein A family
PAKDJCJJ_02003	6.13e-258	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
PAKDJCJJ_02004	1.15e-163	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
PAKDJCJJ_02006	1.1e-236	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
PAKDJCJJ_02007	2.56e-119	perR	-	-	P	ko:K03711,ko:K09825	-	ko00000,ko03000	Belongs to the Fur family
PAKDJCJJ_02008	2.09e-146	-	-	-	S	-	-	-	VIT family
PAKDJCJJ_02009	1.12e-153	-	-	-	S	-	-	-	membrane
PAKDJCJJ_02010	0.0	ybeC	-	-	E	-	-	-	amino acid
PAKDJCJJ_02011	1.53e-106	yoaA	-	-	J	-	-	-	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PAKDJCJJ_02012	2.9e-253	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
PAKDJCJJ_02014	0.0	-	-	-	KLT	-	-	-	Protein kinase domain
PAKDJCJJ_02015	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
PAKDJCJJ_02016	2.22e-229	-	-	-	-	-	-	-	-
PAKDJCJJ_02017	6.36e-162	-	-	-	-	-	-	-	-
PAKDJCJJ_02018	0.0	uvrB3	3.1.12.1	-	KL	ko:K07464	-	ko00000,ko01000,ko02048	DEAD_2
PAKDJCJJ_02019	5.26e-58	-	-	-	-	-	-	-	-
PAKDJCJJ_02020	1.35e-42	-	-	-	-	-	-	-	-
PAKDJCJJ_02021	6.41e-77	-	-	-	-	-	-	-	-
PAKDJCJJ_02022	3.04e-202	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
PAKDJCJJ_02023	4.2e-215	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
PAKDJCJJ_02024	6.02e-193	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
PAKDJCJJ_02025	2.06e-190	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PAKDJCJJ_02026	1.15e-259	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PAKDJCJJ_02027	2.43e-173	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PAKDJCJJ_02028	2.91e-189	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PAKDJCJJ_02029	2.01e-267	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PAKDJCJJ_02030	8.39e-54	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PAKDJCJJ_02031	2.75e-41	yfhR3	-	-	S	ko:K06889	-	ko00000	Serine hydrolase (FSH1)
PAKDJCJJ_02032	2.9e-53	yfhR3	-	-	S	ko:K06889	-	ko00000	Serine hydrolase (FSH1)
PAKDJCJJ_02033	8.66e-229	-	-	-	U	ko:K07241	-	ko00000,ko02000	High-affinity nickel-transport protein
PAKDJCJJ_02034	2.21e-160	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
PAKDJCJJ_02035	8.69e-193	larE	-	-	S	ko:K06864	-	ko00000	NAD synthase
PAKDJCJJ_02036	2.04e-294	larC	4.99.1.12	-	S	ko:K09121	-	ko00000,ko01000	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
PAKDJCJJ_02037	1.37e-172	larB	-	-	S	ko:K06898	-	ko00000	AIR carboxylase
PAKDJCJJ_02038	5.12e-303	larA	5.1.2.1	-	S	ko:K22373	ko00620,map00620	ko00000,ko00001,ko01000	Domain of unknown function (DUF2088)
PAKDJCJJ_02039	6.41e-153	rcfB	-	-	K	-	-	-	Crp-like helix-turn-helix domain
PAKDJCJJ_02040	1.22e-06	-	-	-	S	-	-	-	Protein of unknown function (DUF3102)
PAKDJCJJ_02044	0.0	nox	-	-	C	-	-	-	NADH oxidase
PAKDJCJJ_02045	1.1e-198	degV	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
PAKDJCJJ_02046	1.04e-305	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
PAKDJCJJ_02047	2.1e-165	-	1.1.1.53	-	IQ	ko:K00038	ko00140,ko01100,map00140,map01100	ko00000,ko00001,ko01000	reductase
PAKDJCJJ_02048	2.71e-103	eda	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	KDPG and KHG aldolase
PAKDJCJJ_02049	1.3e-138	kdgK	2.7.1.45	-	G	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	pfkB family carbohydrate kinase
PAKDJCJJ_02050	6.39e-164	kdgT	-	-	P	ko:K02526	-	ko00000,ko02000	2-keto-3-deoxygluconate permease
PAKDJCJJ_02051	5.12e-177	kduD	1.1.1.127	-	IQ	ko:K00065	ko00040,map00040	ko00000,ko00001,ko01000	Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PAKDJCJJ_02052	1.6e-185	kduI	5.3.1.17	-	G	ko:K01815	ko00040,map00040	ko00000,ko00001,ko01000	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
PAKDJCJJ_02053	3.4e-07	-	-	-	-	-	-	-	-
PAKDJCJJ_02054	5.76e-65	-	-	-	G	-	-	-	Xylose isomerase domain protein TIM barrel
PAKDJCJJ_02055	1.36e-128	-	-	-	K	-	-	-	Bacterial transcriptional regulator
PAKDJCJJ_02056	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
PAKDJCJJ_02057	1.61e-132	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAKDJCJJ_02058	9.52e-124	ogt	2.1.1.63	-	L	ko:K00567	-	ko00000,ko01000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PAKDJCJJ_02059	2.28e-292	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
PAKDJCJJ_02060	1.06e-147	-	-	-	GM	-	-	-	NAD(P)H-binding
PAKDJCJJ_02061	2.54e-52	-	-	-	-	-	-	-	-
PAKDJCJJ_02062	2.22e-168	rrp2	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
PAKDJCJJ_02063	6.6e-311	hpk2	-	-	T	-	-	-	Histidine kinase
PAKDJCJJ_02064	3.02e-57	-	-	-	-	-	-	-	-
PAKDJCJJ_02065	6.15e-95	-	-	-	-	-	-	-	-
PAKDJCJJ_02066	0.0	pox2	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
PAKDJCJJ_02067	9.85e-208	-	-	-	P	-	-	-	CorA-like Mg2+ transporter protein
PAKDJCJJ_02068	1.5e-179	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
PAKDJCJJ_02069	1.78e-74	-	-	-	K	-	-	-	Winged helix-turn-helix DNA-binding
PAKDJCJJ_02070	0.0	malL	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
PAKDJCJJ_02071	1.45e-157	vex2	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
PAKDJCJJ_02072	4.08e-273	yclI	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PAKDJCJJ_02073	1.19e-260	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
PAKDJCJJ_02074	2.58e-139	-	-	-	-	-	-	-	-
PAKDJCJJ_02075	3.16e-313	-	-	-	M	ko:K07273	-	ko00000	hydrolase, family 25
PAKDJCJJ_02076	2.37e-248	ykoT	-	-	M	-	-	-	Glycosyl transferase family 2
PAKDJCJJ_02077	5.45e-61	-	-	-	-	-	-	-	-
PAKDJCJJ_02078	4.24e-122	-	-	-	D	-	-	-	Cellulose biosynthesis protein BcsQ
PAKDJCJJ_02080	2.09e-287	opuCA	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PAKDJCJJ_02081	1.39e-136	opuCB	-	-	E	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PAKDJCJJ_02082	1.49e-225	opuCC	-	-	M	ko:K05845	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PAKDJCJJ_02083	3.23e-141	opuCD	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAKDJCJJ_02084	2.84e-300	-	-	-	-	-	-	-	-
PAKDJCJJ_02085	0.0	-	-	-	-	-	-	-	-
PAKDJCJJ_02086	5.02e-87	yodA	-	-	S	-	-	-	Tautomerase enzyme
PAKDJCJJ_02087	0.0	uvrA2	-	-	L	-	-	-	ABC transporter
PAKDJCJJ_02088	4.71e-129	-	-	-	S	ko:K08996	-	ko00000	Protein of unknown function (DUF1440)
PAKDJCJJ_02089	9.38e-317	xylP1	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
PAKDJCJJ_02090	4.44e-122	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PAKDJCJJ_02091	1.54e-51	-	-	-	-	-	-	-	-
PAKDJCJJ_02092	1.38e-89	cdd	3.5.4.5	-	F	ko:K01489	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
PAKDJCJJ_02093	3.35e-137	-	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PAKDJCJJ_02094	0.0	l1n	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
PAKDJCJJ_02095	2.42e-160	-	-	-	-	-	-	-	-
PAKDJCJJ_02096	0.0	oatA	-	-	I	-	-	-	Acyltransferase
PAKDJCJJ_02097	5.52e-242	add	3.5.4.2, 3.5.4.4	-	F	ko:K01488,ko:K02029,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PAKDJCJJ_02098	1.41e-205	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
PAKDJCJJ_02099	1.03e-202	icaB	-	-	G	-	-	-	Polysaccharide deacetylase
PAKDJCJJ_02101	4.56e-87	-	-	-	S	-	-	-	Cupredoxin-like domain
PAKDJCJJ_02102	0.0	copA	3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54	-	P	ko:K01533,ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
PAKDJCJJ_02103	2.84e-204	morA	-	-	S	-	-	-	reductase
PAKDJCJJ_02104	2.11e-289	dacA2	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PAKDJCJJ_02105	7.02e-103	atkY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Copper transport repressor CopY TcrY
PAKDJCJJ_02106	0.0	copB	3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54	-	P	ko:K01533,ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
PAKDJCJJ_02107	1.94e-215	-	-	-	EG	-	-	-	EamA-like transporter family
PAKDJCJJ_02108	6.47e-10	-	-	-	P	-	-	-	Cation efflux family
PAKDJCJJ_02109	8.86e-35	-	-	-	-	-	-	-	-
PAKDJCJJ_02110	0.0	sufI	-	-	Q	-	-	-	Multicopper oxidase
PAKDJCJJ_02111	3.32e-301	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PAKDJCJJ_02112	1.17e-57	-	-	-	-	-	-	-	-
PAKDJCJJ_02115	1.02e-80	-	-	-	M	-	-	-	hydrolase, family 25
PAKDJCJJ_02116	9.82e-111	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
PAKDJCJJ_02117	2.56e-248	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PAKDJCJJ_02118	2.25e-208	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PAKDJCJJ_02119	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PAKDJCJJ_02120	5.23e-125	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
PAKDJCJJ_02121	0.0	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PAKDJCJJ_02122	4.64e-124	yabR	-	-	J	ko:K07571	-	ko00000	RNA binding
PAKDJCJJ_02123	1.33e-58	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
PAKDJCJJ_02124	7.09e-53	yabO	-	-	J	-	-	-	S4 domain protein
PAKDJCJJ_02125	0.0	yabM	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
PAKDJCJJ_02126	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PAKDJCJJ_02127	1.74e-130	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PAKDJCJJ_02128	5.62e-225	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
PAKDJCJJ_02129	0.0	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
PAKDJCJJ_02131	7.47e-148	-	-	-	S	-	-	-	(CBS) domain
PAKDJCJJ_02132	1.45e-80	ndoA	-	-	L	ko:K07171	-	ko00000,ko01000,ko02048	Toxic component of a toxin-antitoxin (TA) module
PAKDJCJJ_02134	2.03e-273	alr	5.1.1.1	-	E	ko:K01775	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PAKDJCJJ_02135	9.61e-84	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PAKDJCJJ_02136	1.23e-273	-	-	-	S	-	-	-	nuclear-transcribed mRNA catabolic process, no-go decay
PAKDJCJJ_02137	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PAKDJCJJ_02138	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PAKDJCJJ_02139	7.79e-192	-	-	-	-	-	-	-	-
PAKDJCJJ_02140	1.42e-192	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
PAKDJCJJ_02141	2.17e-127	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
PAKDJCJJ_02142	2.06e-108	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PAKDJCJJ_02143	8.44e-315	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
PAKDJCJJ_02144	2.78e-13	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
PAKDJCJJ_02145	8.23e-157	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
PAKDJCJJ_02146	3.24e-57	rpmE2	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
PAKDJCJJ_02147	1.21e-302	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PAKDJCJJ_02149	0.0	-	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
PAKDJCJJ_02150	3.07e-309	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
PAKDJCJJ_02151	2.64e-86	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
PAKDJCJJ_02152	0.0	hsdR	3.1.21.3	-	V	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
PAKDJCJJ_02153	6.13e-40	-	-	-	S	-	-	-	MTH538 TIR-like domain (DUF1863)
PAKDJCJJ_02154	2.81e-06	-	-	-	-	-	-	-	-
PAKDJCJJ_02155	3.52e-155	-	-	-	V	-	-	-	Type I restriction modification DNA specificity domain
PAKDJCJJ_02156	6.34e-49	-	-	-	L	-	-	-	Integrase
PAKDJCJJ_02157	4.72e-218	-	-	-	L	ko:K07448	-	ko00000,ko02048	Restriction endonuclease
PAKDJCJJ_02158	1.15e-67	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	Bacterial toxin of type II toxin-antitoxin system, YafQ
PAKDJCJJ_02159	1.25e-56	-	-	-	S	ko:K07473	-	ko00000,ko02048	RelB antitoxin
PAKDJCJJ_02160	4.3e-284	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
PAKDJCJJ_02161	8.59e-50	-	-	-	-	-	-	-	-
PAKDJCJJ_02162	4.49e-253	-	-	-	S	-	-	-	Domain of unknown function (DUF1998)
PAKDJCJJ_02163	0.0	-	-	-	KL	-	-	-	Helicase conserved C-terminal domain
PAKDJCJJ_02165	2.88e-235	-	2.1.1.37	-	H	ko:K00558	ko00270,ko01100,ko05206,map00270,map01100,map05206	ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036	C-5 cytosine-specific DNA methylase
PAKDJCJJ_02166	1.77e-12	-	-	-	-	-	-	-	-
PAKDJCJJ_02167	9.28e-262	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	Pyridine nucleotide-disulphide oxidoreductase
PAKDJCJJ_02168	9.8e-297	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PAKDJCJJ_02169	6.13e-108	-	-	-	L	-	-	-	Helix-turn-helix domain
PAKDJCJJ_02170	5.84e-294	-	-	-	S	-	-	-	Pyridine nucleotide-disulphide oxidoreductase
PAKDJCJJ_02171	1.67e-182	-	-	-	U	ko:K10119	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAKDJCJJ_02172	5.87e-194	-	-	-	U	ko:K10118	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PAKDJCJJ_02173	0.0	-	-	-	G	ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PAKDJCJJ_02174	2.29e-273	msmK2	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PAKDJCJJ_02175	4.57e-217	lacM	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
PAKDJCJJ_02176	0.0	lacL	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
PAKDJCJJ_02177	1.49e-93	ywnA	-	-	K	-	-	-	Transcriptional regulator
PAKDJCJJ_02178	3.09e-120	qorB	1.6.5.2	-	GM	ko:K19267	ko00130,ko01110,map00130,map01110	ko00000,ko00001,ko01000	NmrA-like family
PAKDJCJJ_02179	1.5e-277	-	-	-	M	-	-	-	domain protein
PAKDJCJJ_02180	5.44e-99	-	-	-	M	-	-	-	domain protein
PAKDJCJJ_02182	5.05e-184	-	-	-	K	-	-	-	Helix-turn-helix domain
PAKDJCJJ_02183	3.48e-215	-	-	-	-	-	-	-	-
PAKDJCJJ_02184	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
PAKDJCJJ_02185	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PAKDJCJJ_02186	3.82e-277	-	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
PAKDJCJJ_02187	1.35e-237	pgdA	3.5.1.104	-	G	ko:K22278	-	ko00000,ko01000	polysaccharide deacetylase
PAKDJCJJ_02188	3.66e-77	-	-	-	-	-	-	-	-
PAKDJCJJ_02189	1.58e-133	-	-	-	GM	-	-	-	NAD(P)H-binding
PAKDJCJJ_02190	4e-234	iolS	-	-	C	ko:K06607	-	ko00000,ko01000	Aldo keto reductase
PAKDJCJJ_02191	2.46e-290	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
PAKDJCJJ_02192	8.73e-122	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PAKDJCJJ_02193	9.75e-137	drrB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 type transporter
PAKDJCJJ_02194	1.31e-216	-	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	UbiA prenyltransferase family
PAKDJCJJ_02195	0.0	yfhO	-	-	S	-	-	-	Bacterial membrane protein YfhO
PAKDJCJJ_02196	9.8e-113	ccl	-	-	S	-	-	-	QueT transporter
PAKDJCJJ_02199	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2207)
PAKDJCJJ_02200	0.0	xynB	3.2.1.37	GH43	G	ko:K01198	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
PAKDJCJJ_02201	0.0	-	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
PAKDJCJJ_02202	1.04e-216	rhaS2	-	-	K	-	-	-	Transcriptional regulator, AraC family
PAKDJCJJ_02203	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PAKDJCJJ_02204	3.01e-30	-	-	-	-	-	-	-	-
PAKDJCJJ_02205	5.9e-194	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
PAKDJCJJ_02206	8.3e-117	-	-	-	-	-	-	-	-
PAKDJCJJ_02209	1.06e-68	-	-	-	-	-	-	-	-
PAKDJCJJ_02210	1.99e-145	nt5e	3.1.3.18	-	L	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	haloacid dehalogenase-like hydrolase
PAKDJCJJ_02211	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
PAKDJCJJ_02212	6.13e-100	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PAKDJCJJ_02213	1.6e-140	sip3	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PAKDJCJJ_02214	1.9e-278	tcaB	-	-	EGP	ko:K07552	-	ko00000,ko02000	Drug resistance transporter Bcr CflA subfamily
PAKDJCJJ_02215	5.8e-290	-	-	-	S	-	-	-	module of peptide synthetase
PAKDJCJJ_02216	2.51e-120	ykhA	3.1.2.20	-	I	ko:K01073	-	ko00000,ko01000	Thioesterase superfamily
PAKDJCJJ_02217	4.33e-127	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PAKDJCJJ_02218	1.29e-149	-	-	-	S	ko:K07118	-	ko00000	NAD(P)H-binding
PAKDJCJJ_02219	8.07e-314	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
PAKDJCJJ_02220	5.5e-51	-	-	-	-	-	-	-	-
PAKDJCJJ_02221	2.06e-161	yfnB	3.8.1.2	-	S	ko:K01560,ko:K07025	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	HAD-hyrolase-like
PAKDJCJJ_02222	1.18e-50	-	-	-	-	-	-	-	-
PAKDJCJJ_02223	1.89e-82	-	-	-	-	-	-	-	-
PAKDJCJJ_02224	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PAKDJCJJ_02225	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PAKDJCJJ_02226	2.25e-149	jag	-	-	S	ko:K06346	-	ko00000	R3H domain protein
PAKDJCJJ_02227	1.67e-185	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PAKDJCJJ_02228	9.04e-78	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PAKDJCJJ_02229	1.61e-20	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
PAKDJCJJ_02230	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PAKDJCJJ_02231	2.74e-265	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PAKDJCJJ_02232	9.18e-49	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain protein YaaA
PAKDJCJJ_02233	4.22e-267	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PAKDJCJJ_02234	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PAKDJCJJ_02235	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PAKDJCJJ_02236	1.36e-65	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
PAKDJCJJ_02237	5.15e-104	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PAKDJCJJ_02238	1.33e-47	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PAKDJCJJ_02239	2.68e-296	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
PAKDJCJJ_02240	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
PAKDJCJJ_02241	5.87e-181	-	-	-	-	-	-	-	-
PAKDJCJJ_02242	7.94e-293	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
PAKDJCJJ_02243	6.35e-240	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
PAKDJCJJ_02244	3.46e-116	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
PAKDJCJJ_02245	2.56e-129	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAKDJCJJ_02246	4.07e-52	-	-	-	S	-	-	-	response to heat
PAKDJCJJ_02247	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
PAKDJCJJ_02248	2.22e-92	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
PAKDJCJJ_02250	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
PAKDJCJJ_02251	1.77e-130	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
PAKDJCJJ_02252	1.49e-269	yttB	-	-	EGP	-	-	-	Major Facilitator
PAKDJCJJ_02253	1.68e-37	-	-	-	-	-	-	-	-
PAKDJCJJ_02254	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
PAKDJCJJ_02255	1.43e-52	-	-	-	-	-	-	-	-
PAKDJCJJ_02256	2.67e-166	-	-	-	E	-	-	-	Matrixin
PAKDJCJJ_02258	1.19e-170	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
PAKDJCJJ_02259	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PAKDJCJJ_02260	4.78e-307	yycH	-	-	S	-	-	-	YycH protein
PAKDJCJJ_02261	1.27e-188	yycI	-	-	S	-	-	-	YycH protein
PAKDJCJJ_02262	2.33e-200	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
PAKDJCJJ_02263	3.98e-272	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
PAKDJCJJ_02264	3.01e-107	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PAKDJCJJ_02266	0.000134	mrsA1	1.8.4.11	-	O	ko:K07304	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PAKDJCJJ_02267	2.48e-252	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PAKDJCJJ_02268	0.0	arcD	-	-	E	ko:K03758	-	ko00000,ko02000	Arginine ornithine antiporter
PAKDJCJJ_02269	1.09e-275	arcT	-	-	E	-	-	-	Aminotransferase
PAKDJCJJ_02270	1.27e-219	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
PAKDJCJJ_02271	4.82e-155	-	-	-	K	ko:K10914,ko:K21828	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	Cyclic nucleotide-monophosphate binding domain
PAKDJCJJ_02272	2.58e-165	XK27_07210	-	-	S	-	-	-	B3 4 domain
PAKDJCJJ_02273	1.6e-85	lysM	-	-	M	-	-	-	LysM domain
PAKDJCJJ_02274	6.28e-124	laaE	-	-	K	-	-	-	Transcriptional regulator PadR-like family
PAKDJCJJ_02275	5.1e-45	chaT1	-	-	U	ko:K03446	-	ko00000,ko00002,ko02000	the major facilitator superfamily
PAKDJCJJ_02276	8.84e-171	-	-	-	U	-	-	-	Major Facilitator Superfamily
PAKDJCJJ_02277	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
PAKDJCJJ_02278	4.84e-203	-	-	-	-	-	-	-	-
PAKDJCJJ_02279	4.98e-44	-	-	-	S	-	-	-	Transglycosylase associated protein
PAKDJCJJ_02280	1.23e-119	-	-	-	-	-	-	-	-
PAKDJCJJ_02281	1.02e-34	-	-	-	-	-	-	-	-
PAKDJCJJ_02282	4.16e-93	-	-	-	S	-	-	-	Asp23 family, cell envelope-related function
PAKDJCJJ_02283	5.5e-83	asp2	-	-	S	-	-	-	Asp23 family, cell envelope-related function
PAKDJCJJ_02284	1.8e-87	-	-	-	K	-	-	-	HxlR-like helix-turn-helix
PAKDJCJJ_02285	5.65e-171	-	-	-	S	-	-	-	KR domain
PAKDJCJJ_02287	2.96e-147	-	-	-	-	-	-	-	-
PAKDJCJJ_02288	7.26e-202	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
PAKDJCJJ_02289	3.03e-188	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PAKDJCJJ_02290	3.86e-262	-	-	-	EGP	ko:K02030,ko:K07552	-	ko00000,ko00002,ko02000	Drug resistance transporter Bcr CflA subfamily
PAKDJCJJ_02291	1.9e-109	gpo	1.11.1.9	-	O	ko:K00432	ko00480,ko00590,ko04918,map00480,map00590,map04918	ko00000,ko00001,ko01000	Belongs to the glutathione peroxidase family
PAKDJCJJ_02292	7.14e-229	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
PAKDJCJJ_02293	2.63e-82	lexA	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator, GntR family
PAKDJCJJ_02294	6.81e-160	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PAKDJCJJ_02295	2.51e-158	-	-	-	-	-	-	-	-
PAKDJCJJ_02296	1.81e-178	-	-	-	T	-	-	-	Tyrosine phosphatase family
PAKDJCJJ_02297	2.36e-156	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
PAKDJCJJ_02298	1.02e-125	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
PAKDJCJJ_02299	0.0	lmrA	3.6.3.44	-	V	ko:K02021,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter
PAKDJCJJ_02300	1.35e-141	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PAKDJCJJ_02301	8.65e-144	aqpZ	-	-	U	ko:K06188	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
PAKDJCJJ_02302	5.98e-72	-	-	-	S	-	-	-	Domain of unknown function (DU1801)
PAKDJCJJ_02303	0.0	epsA	-	-	I	-	-	-	PAP2 superfamily
PAKDJCJJ_02304	9.53e-93	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
PAKDJCJJ_02305	9.15e-207	-	-	-	K	-	-	-	LysR substrate binding domain
PAKDJCJJ_02306	0.0	yclC	4.1.1.61, 4.1.1.98	-	H	ko:K01612,ko:K03182,ko:K16874	ko00130,ko00365,ko00627,ko01100,ko01110,ko01120,ko01220,map00130,map00365,map00627,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
PAKDJCJJ_02307	1.87e-126	ubiX	2.5.1.129	-	H	ko:K03186	ko00130,ko00627,ko00940,ko01100,ko01110,ko01120,ko01220,map00130,map00627,map00940,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
PAKDJCJJ_02308	7.84e-92	-	-	-	-	-	-	-	-
PAKDJCJJ_02309	3.16e-204	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-type cobalt transport system permease component CbiQ and related transporters
PAKDJCJJ_02310	0.0	-	-	-	S	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
PAKDJCJJ_02311	8.08e-147	-	-	-	S	ko:K16927	-	ko00000,ko00002,ko02000	ECF-type riboflavin transporter, S component
PAKDJCJJ_02312	1.43e-229	-	-	-	U	-	-	-	FFAT motif binding
PAKDJCJJ_02313	1.94e-89	-	-	-	S	-	-	-	Domain of unknown function (DUF4430)
PAKDJCJJ_02314	4.32e-94	-	-	-	L	ko:K07497	-	ko00000	4.5 Transposon and IS
PAKDJCJJ_02315	4.22e-248	-	1.11.2.4	-	Q	ko:K15629	-	ko00000,ko00199,ko01000	Cytochrome P450
PAKDJCJJ_02316	6.45e-129	-	-	-	L	-	-	-	Phage integrase family
PAKDJCJJ_02317	2.85e-22	-	-	-	-	-	-	-	-
PAKDJCJJ_02318	6.27e-173	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PAKDJCJJ_02319	4.8e-224	draG	-	-	O	-	-	-	ADP-ribosylglycohydrolase
PAKDJCJJ_02320	7.74e-33	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
PAKDJCJJ_02321	8.62e-85	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
PAKDJCJJ_02323	2.45e-128	cadD	-	-	P	-	-	-	Cadmium resistance transporter
PAKDJCJJ_02324	3.26e-101	-	-	-	K	ko:K03827	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
PAKDJCJJ_02325	1.19e-107	-	-	-	S	-	-	-	GtrA-like protein
PAKDJCJJ_02326	4.78e-91	-	-	-	S	-	-	-	TIR domain
PAKDJCJJ_02330	5.07e-108	ndk	2.7.4.6	-	F	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	ko00000,ko00001,ko00002,ko01000,ko04131	Belongs to the NDK family
PAKDJCJJ_02331	2.94e-34	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain
PAKDJCJJ_02332	1.63e-159	pgm3	-	-	G	-	-	-	phosphoglycerate mutase
PAKDJCJJ_02333	1.26e-213	-	-	-	S	-	-	-	Polyphosphate nucleotide phosphotransferase, PPK2 family
PAKDJCJJ_02334	7.73e-277	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
PAKDJCJJ_02335	7.05e-115	-	-	-	-	-	-	-	-
PAKDJCJJ_02336	5.8e-101	-	-	-	F	-	-	-	nucleoside 2-deoxyribosyltransferase
PAKDJCJJ_02337	2.41e-142	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PAKDJCJJ_02338	2.61e-49	ynzC	-	-	S	-	-	-	UPF0291 protein
PAKDJCJJ_02339	1.61e-44	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
PAKDJCJJ_02340	0.0	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PAKDJCJJ_02341	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PAKDJCJJ_02342	2.07e-154	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
PAKDJCJJ_02343	1.02e-176	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
PAKDJCJJ_02344	5.19e-59	yazA	-	-	L	ko:K07461	-	ko00000	GIY-YIG catalytic domain protein
PAKDJCJJ_02345	4.53e-238	ldhD	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAKDJCJJ_02346	9.81e-175	-	-	-	S	ko:K07025	-	ko00000	Haloacid dehalogenase-like hydrolase
PAKDJCJJ_02347	9.38e-187	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
PAKDJCJJ_02348	2.79e-197	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PAKDJCJJ_02349	2.12e-165	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
PAKDJCJJ_02350	2.83e-111	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PAKDJCJJ_02351	3.42e-97	-	-	-	-	-	-	-	-
PAKDJCJJ_02352	1.2e-191	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PAKDJCJJ_02353	3.93e-177	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
PAKDJCJJ_02354	8.39e-297	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
PAKDJCJJ_02355	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PAKDJCJJ_02356	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PAKDJCJJ_02357	4.41e-52	-	-	-	-	-	-	-	-
PAKDJCJJ_02358	3.03e-106	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
PAKDJCJJ_02359	2.34e-252	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
PAKDJCJJ_02360	2.64e-63	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
PAKDJCJJ_02361	4.88e-60	ylxQ	-	-	J	-	-	-	ribosomal protein
PAKDJCJJ_02362	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PAKDJCJJ_02363	1.77e-74	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PAKDJCJJ_02364	2.19e-219	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PAKDJCJJ_02365	4.14e-230	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
PAKDJCJJ_02366	7.45e-47	-	-	-	L	-	-	-	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PAKDJCJJ_02367	5.38e-42	-	-	-	L	-	-	-	Helix-turn-helix domain
PAKDJCJJ_02368	6.82e-146	-	-	-	K	-	-	-	transcriptional regulator, ArsR family
PAKDJCJJ_02369	1.36e-182	xsa	3.2.1.55	GH51	G	ko:K01209	ko00520,map00520	ko00000,ko00001,ko01000	Alpha-L-arabinofuranosidase C-terminus
PAKDJCJJ_02370	2.53e-150	xynP	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
PAKDJCJJ_02371	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
PAKDJCJJ_02372	4.51e-148	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAKDJCJJ_02373	2.71e-297	-	-	-	S	ko:K01421	-	ko00000	ABC-2 family transporter protein
PAKDJCJJ_02374	1.73e-185	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
PAKDJCJJ_02375	4.14e-72	-	-	-	S	-	-	-	protein encoded in hypervariable junctions of pilus gene clusters
PAKDJCJJ_02376	4.47e-174	-	-	-	-	-	-	-	-
PAKDJCJJ_02377	1.66e-128	-	-	-	S	ko:K09962	-	ko00000	Nucleotidyltransferase
PAKDJCJJ_02378	2.44e-110	-	-	-	S	-	-	-	Protein of unknown function (DUF2798)
PAKDJCJJ_02379	2.19e-75	yuxO	-	-	Q	-	-	-	Thioesterase superfamily
PAKDJCJJ_02380	2.33e-199	menB	4.1.3.36	-	H	ko:K01661	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PAKDJCJJ_02381	0.0	menE	6.2.1.26	-	H	ko:K01911	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
PAKDJCJJ_02382	1.44e-122	-	-	-	S	-	-	-	Protein of unknown function (DUF1097)
PAKDJCJJ_02383	6.44e-213	-	-	-	-	-	-	-	-
PAKDJCJJ_02384	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PAKDJCJJ_02385	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
PAKDJCJJ_02386	3.78e-270	-	-	-	E	-	-	-	Major Facilitator Superfamily
PAKDJCJJ_02389	2.68e-129	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAKDJCJJ_02390	4.13e-231	-	-	-	C	-	-	-	nadph quinone reductase
PAKDJCJJ_02391	5.55e-137	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PAKDJCJJ_02392	0.0	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
PAKDJCJJ_02393	0.0	-	4.1.1.15, 4.1.2.27	-	E	ko:K01580,ko:K01634	ko00250,ko00410,ko00430,ko00600,ko00650,ko01100,ko01110,ko01120,ko02024,ko04071,ko04727,ko04940,map00250,map00410,map00430,map00600,map00650,map01100,map01110,map01120,map02024,map04071,map04727,map04940	ko00000,ko00001,ko00002,ko01000	Belongs to the group II decarboxylase family
PAKDJCJJ_02394	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PAKDJCJJ_02396	2.12e-222	-	-	-	-	-	-	-	-
PAKDJCJJ_02397	3.29e-30	tagF	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
PAKDJCJJ_02398	1.24e-210	glf	5.4.99.9	-	M	ko:K01854	ko00052,ko00520,map00052,map00520	ko00000,ko00001,ko01000	UDP-galactopyranose mutase
PAKDJCJJ_02399	5.37e-214	cps1C	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
PAKDJCJJ_02400	5.3e-56	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.99
PAKDJCJJ_02401	1.31e-170	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
PAKDJCJJ_02402	1.04e-182	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PAKDJCJJ_02403	2.4e-229	serA	1.1.1.399, 1.1.1.95	-	EH	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PAKDJCJJ_02404	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
PAKDJCJJ_02405	1.12e-224	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome d ubiquinol oxidase subunit II
PAKDJCJJ_02406	0.0	cydC	-	-	CO	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PAKDJCJJ_02407	0.0	cydD	-	-	CO	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
PAKDJCJJ_02408	6.63e-232	hepT	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PAKDJCJJ_02409	3.87e-208	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
PAKDJCJJ_02410	1.86e-128	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PAKDJCJJ_02411	1.74e-274	purK2	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PAKDJCJJ_02412	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
PAKDJCJJ_02413	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PAKDJCJJ_02414	6.33e-256	camS	-	-	S	-	-	-	sex pheromone
PAKDJCJJ_02415	4.8e-66	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PAKDJCJJ_02416	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PAKDJCJJ_02417	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PAKDJCJJ_02418	6.69e-239	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
PAKDJCJJ_02419	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PAKDJCJJ_02420	3.37e-56	eutP	-	-	E	ko:K04029	-	ko00000	Ethanolamine utilisation - propanediol utilisation
PAKDJCJJ_02421	4.82e-164	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
PAKDJCJJ_02422	1.71e-264	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PAKDJCJJ_02423	1.47e-55	-	-	-	CQ	-	-	-	BMC
PAKDJCJJ_02424	1.56e-166	pduB	-	-	E	-	-	-	BMC
PAKDJCJJ_02425	0.0	pduC	4.2.1.28	-	Q	ko:K01699	ko00640,map00640	ko00000,ko00001,ko01000	Dehydratase large subunit
PAKDJCJJ_02426	2.9e-167	pduD	4.2.1.28	-	Q	ko:K13919	ko00640,map00640	ko00000,ko00001,ko01000	Dehydratase medium subunit
PAKDJCJJ_02427	7.77e-120	pduE	4.2.1.28	-	Q	ko:K13920	ko00640,map00640	ko00000,ko00001,ko01000	Dehydratase small subunit
PAKDJCJJ_02428	0.0	pduG	-	-	D	-	-	-	Diol dehydratase reactivase ATPase-like domain
PAKDJCJJ_02429	2.32e-75	pduH	-	-	S	-	-	-	Dehydratase medium subunit
PAKDJCJJ_02430	1.43e-111	-	-	-	CQ	-	-	-	BMC
PAKDJCJJ_02431	3.38e-56	pduJ	-	-	CQ	-	-	-	BMC
PAKDJCJJ_02432	4.18e-147	pduL	2.3.1.222	-	Q	ko:K13923	ko00640,map00640	ko00000,ko00001,ko01000	Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate
PAKDJCJJ_02433	1.57e-118	-	-	-	S	-	-	-	Putative propanediol utilisation
PAKDJCJJ_02434	3.12e-56	pduN	-	-	CQ	ko:K04028	-	ko00000	Ethanolamine utilisation protein EutN/carboxysome
PAKDJCJJ_02435	7.33e-135	-	-	-	S	-	-	-	Cobalamin adenosyltransferase
PAKDJCJJ_02436	7.1e-106	pduO	-	-	S	-	-	-	Haem-degrading
PAKDJCJJ_02437	0.0	pduP	1.2.1.87	-	C	ko:K13922	ko00640,map00640	ko00000,ko00001,ko01000	Aldehyde dehydrogenase family
PAKDJCJJ_02438	1.31e-269	pduQ	-	-	C	ko:K13921	ko00640,map00640	ko00000,ko00001	Iron-containing alcohol dehydrogenase
PAKDJCJJ_02439	1.64e-281	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAKDJCJJ_02440	1.47e-72	-	-	-	E	ko:K04031	-	ko00000	BMC
PAKDJCJJ_02441	1.87e-248	namA	-	-	C	-	-	-	Oxidoreductase
PAKDJCJJ_02442	1.69e-186	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Pfam:Y_phosphatase3C
PAKDJCJJ_02443	1.06e-76	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PAKDJCJJ_02444	2.17e-48	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PAKDJCJJ_02445	3.01e-155	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PAKDJCJJ_02446	2.68e-296	deoB	5.4.2.7	-	G	ko:K01839	ko00030,ko00230,map00030,map00230	ko00000,ko00001,ko01000	Phosphotransfer between the C1 and C5 carbon atoms of pentose
PAKDJCJJ_02447	1.23e-166	deoD	2.4.2.1	-	F	ko:K03784	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Purine nucleoside phosphorylase
PAKDJCJJ_02448	6.79e-222	deoR	-	-	K	ko:K05346	-	ko00000,ko03000	sugar-binding domain protein
PAKDJCJJ_02449	1.09e-307	pdp	2.4.2.2	-	F	ko:K00756	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	pyrimidine-nucleoside phosphorylase
PAKDJCJJ_02450	0.0	gshA	6.3.2.2	-	H	ko:K01919	ko00270,ko00480,ko01100,map00270,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the glutamate--cysteine ligase type 1 family
PAKDJCJJ_02451	5.83e-87	rbsD	5.4.99.62	-	G	ko:K06726	ko02010,map02010	ko00000,ko00001,ko01000	Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PAKDJCJJ_02452	0.0	fucP	-	-	G	ko:K02429	-	ko00000,ko02000	Major Facilitator Superfamily
PAKDJCJJ_02453	2.1e-304	-	-	-	E	ko:K03294	-	ko00000	amino acid
PAKDJCJJ_02454	4.42e-292	gntP	-	-	EG	ko:K03299	-	ko00000,ko02000	Gluconate
PAKDJCJJ_02455	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
PAKDJCJJ_02456	8.34e-195	gntR	-	-	K	-	-	-	rpiR family
PAKDJCJJ_02457	5.71e-190	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
PAKDJCJJ_02458	2.89e-84	-	-	-	S	-	-	-	Domain of unknown function (DUF4828)
PAKDJCJJ_02459	4.05e-242	mocA	-	-	S	-	-	-	Oxidoreductase
PAKDJCJJ_02460	8.74e-298	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
PAKDJCJJ_02463	4.5e-61	-	-	-	T	-	-	-	Universal stress protein family
PAKDJCJJ_02464	2.22e-296	gntP	-	-	EG	ko:K03299	-	ko00000,ko02000	Gluconate
PAKDJCJJ_02465	1.87e-203	csbB	-	GT2	M	ko:K20534	-	ko00000,ko01000,ko01005,ko02000	Glycosyltransferase like family 2
PAKDJCJJ_02466	1.05e-272	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PAKDJCJJ_02467	1.3e-201	-	-	-	S	-	-	-	Nuclease-related domain
PAKDJCJJ_02468	1.56e-203	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
PAKDJCJJ_02469	6.23e-102	ykuP	-	-	C	ko:K03839	-	ko00000	Flavodoxin
PAKDJCJJ_02470	8.69e-187	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
PAKDJCJJ_02471	1.11e-282	pbpX2	-	-	V	-	-	-	Beta-lactamase
PAKDJCJJ_02472	2.15e-52	-	-	-	S	-	-	-	Bacteriocin-protection, YdeI or OmpD-Associated
PAKDJCJJ_02473	1.5e-140	ygaC	-	-	J	ko:K07586	-	ko00000	Belongs to the UPF0374 family
PAKDJCJJ_02474	6.54e-253	yueF	-	-	S	-	-	-	AI-2E family transporter
PAKDJCJJ_02475	2.51e-98	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Glycerol-3-phosphate cytidylyltransferase
PAKDJCJJ_02476	1.06e-201	-	-	-	-	-	-	-	-
PAKDJCJJ_02477	0.0	tagF	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	glycerophosphotransferase
PAKDJCJJ_02478	6.28e-118	-	-	-	-	-	-	-	-
PAKDJCJJ_02479	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PAKDJCJJ_02480	0.0	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
PAKDJCJJ_02481	0.0	nox	1.6.3.4	-	C	ko:K17869	-	ko00000,ko01000	NADH oxidase
PAKDJCJJ_02482	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PAKDJCJJ_02483	0.0	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	Cation transporter/ATPase, N-terminus
PAKDJCJJ_02484	1.12e-272	-	-	-	G	-	-	-	MucBP domain
PAKDJCJJ_02485	0.0	clpE	-	-	O	ko:K03697	-	ko00000,ko03110	Belongs to the ClpA ClpB family
PAKDJCJJ_02486	0.0	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
PAKDJCJJ_02487	5.73e-73	-	-	-	-	-	-	-	-
PAKDJCJJ_02488	2.31e-87	-	-	-	-	-	-	-	-
PAKDJCJJ_02489	0.0	sthIR	3.1.21.5	-	L	ko:K01156	-	ko00000,ko01000,ko02048	Type III restriction enzyme, res subunit
PAKDJCJJ_02490	1.13e-18	-	2.1.1.72	-	L	ko:K07316	-	ko00000,ko01000,ko02048	DNA methylase
PAKDJCJJ_02491	8.83e-06	-	-	-	-	-	-	-	-
PAKDJCJJ_02492	5.47e-85	-	-	-	D	-	-	-	AAA domain
PAKDJCJJ_02493	7.75e-142	ypjC	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PAKDJCJJ_02494	5.25e-297	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
PAKDJCJJ_02495	4.58e-54	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PAKDJCJJ_02496	2.29e-315	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
PAKDJCJJ_02497	2.29e-278	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
PAKDJCJJ_02498	9.33e-153	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
PAKDJCJJ_02499	4.61e-63	-	-	-	M	-	-	-	Lysin motif
PAKDJCJJ_02500	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
PAKDJCJJ_02501	9.21e-244	-	-	-	S	-	-	-	Helix-turn-helix domain
PAKDJCJJ_02502	6.4e-121	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PAKDJCJJ_02503	2.58e-166	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
PAKDJCJJ_02504	1.7e-133	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PAKDJCJJ_02505	1.54e-170	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PAKDJCJJ_02506	7.96e-94	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PAKDJCJJ_02507	2.17e-212	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
PAKDJCJJ_02508	8.89e-214	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
PAKDJCJJ_02509	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
PAKDJCJJ_02510	7.92e-162	tal2	2.2.1.2	-	H	ko:K00616	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transaldolase/Fructose-6-phosphate aldolase
PAKDJCJJ_02511	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
PAKDJCJJ_02512	0.0	clpB	-	-	O	ko:K03695	ko04213,map04213	ko00000,ko00001,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PAKDJCJJ_02513	3.57e-301	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
PAKDJCJJ_02514	3.73e-198	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PAKDJCJJ_02515	1.14e-162	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
PAKDJCJJ_02516	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
PAKDJCJJ_02517	1.21e-115	-	-	-	K	-	-	-	Transcriptional regulator
PAKDJCJJ_02518	9.66e-252	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PAKDJCJJ_02519	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PAKDJCJJ_02520	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
PAKDJCJJ_02521	7.13e-227	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
PAKDJCJJ_02522	7.51e-194	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
PAKDJCJJ_02523	1.27e-217	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PAKDJCJJ_02524	1.93e-81	dgkA	2.7.1.107, 2.7.1.66	-	M	ko:K00887,ko:K00901	ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231	ko00000,ko00001,ko01000	Diacylglycerol kinase
PAKDJCJJ_02525	1.22e-112	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PAKDJCJJ_02526	2.4e-231	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
PAKDJCJJ_02527	1.72e-94	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
PAKDJCJJ_02528	1.45e-89	ydeP	-	-	K	-	-	-	Transcriptional regulator, HxlR family
PAKDJCJJ_02529	2.2e-250	qor	1.1.1.1, 1.6.5.5	-	C	ko:K00001,ko:K00344	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
PAKDJCJJ_02530	2.21e-30	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
PAKDJCJJ_02531	1.39e-192	yqfL	2.7.11.33, 2.7.4.28	-	F	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PAKDJCJJ_02532	1.73e-219	nfo	3.1.21.2	-	L	ko:K01151	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PAKDJCJJ_02533	6.21e-308	-	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	glycerophosphotransferase
PAKDJCJJ_02534	1.84e-194	tagG	-	-	U	ko:K09692	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transport permease protein
PAKDJCJJ_02535	1.16e-260	tagB	2.7.8.44	-	M	ko:K21285	-	ko00000,ko01000	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PAKDJCJJ_02536	3.33e-208	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PAKDJCJJ_02537	1.2e-123	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PAKDJCJJ_02538	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PAKDJCJJ_02539	1.62e-313	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
PAKDJCJJ_02540	1.15e-126	-	-	-	-	-	-	-	-
PAKDJCJJ_02541	3.46e-206	lytH	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	N-acetylmuramoyl-L-alanine amidase
PAKDJCJJ_02542	1.03e-208	-	-	-	G	-	-	-	Fructosamine kinase
PAKDJCJJ_02543	1.55e-221	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PAKDJCJJ_02544	4.32e-122	-	-	-	KT	ko:K07719	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	YcbB domain
PAKDJCJJ_02545	1.5e-260	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PAKDJCJJ_02546	2.19e-47	-	-	-	-	-	-	-	-
PAKDJCJJ_02547	3.28e-178	-	-	-	G	-	-	-	Xylose isomerase domain protein TIM barrel
PAKDJCJJ_02548	1.36e-295	gntT	-	-	EG	-	-	-	Citrate transporter
PAKDJCJJ_02549	3.39e-227	kdgK	2.7.1.45	-	G	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	pfkB family carbohydrate kinase
PAKDJCJJ_02550	3.16e-137	-	4.1.2.43	-	G	ko:K08093	ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Orotidine 5'-phosphate decarboxylase HUMPS family
PAKDJCJJ_02551	4.77e-112	hxlB	5.3.1.27	-	M	ko:K08094	ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	sugar phosphate isomerase involved in capsule formation
PAKDJCJJ_02552	1.49e-225	kdgR	-	-	K	ko:K02525	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PAKDJCJJ_02553	3.57e-72	-	-	-	-	-	-	-	-
PAKDJCJJ_02554	1.99e-109	-	-	-	-	-	-	-	-
PAKDJCJJ_02555	0.0	-	-	-	L	-	-	-	DNA helicase
PAKDJCJJ_02556	1.16e-243	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
PAKDJCJJ_02557	5.35e-217	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
PAKDJCJJ_02558	9.64e-289	mvaA	1.1.1.88, 2.3.1.9	-	C	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the HMG-CoA reductase family
PAKDJCJJ_02559	6.61e-230	-	-	-	-	-	-	-	-
PAKDJCJJ_02560	8.39e-168	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
PAKDJCJJ_02561	8.41e-67	-	-	-	-	-	-	-	-
PAKDJCJJ_02562	1.03e-206	yunF	-	-	F	-	-	-	Protein of unknown function DUF72
PAKDJCJJ_02563	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PAKDJCJJ_02564	1.63e-187	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
PAKDJCJJ_02565	9.98e-128	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PAKDJCJJ_02566	4.9e-208	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PAKDJCJJ_02567	1.14e-48	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
PAKDJCJJ_02568	3.2e-207	ispE	2.7.1.148	-	F	ko:K00919,ko:K16924	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PAKDJCJJ_02569	4.6e-143	ung2	-	-	L	-	-	-	Uracil-DNA glycosylase
PAKDJCJJ_02570	0.0	yicI	3.2.1.177	GH31	G	ko:K01811	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 31 family
PAKDJCJJ_02571	0.0	xylP	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
PAKDJCJJ_02572	7.64e-271	xylR	-	-	GK	-	-	-	ROK family
PAKDJCJJ_02573	0.0	bglA	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PAKDJCJJ_02574	1.04e-213	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
PAKDJCJJ_02575	1.48e-118	-	-	-	-	-	-	-	-
PAKDJCJJ_02577	2.03e-208	-	-	-	S	ko:K06889	-	ko00000	Prolyl oligopeptidase family
PAKDJCJJ_02578	1.66e-215	psaA	-	-	P	ko:K02077,ko:K11707	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
PAKDJCJJ_02579	7.18e-169	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
PAKDJCJJ_02580	2.09e-173	znuB	-	-	U	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
PAKDJCJJ_02583	9.78e-184	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
PAKDJCJJ_02584	7.66e-308	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PAKDJCJJ_02585	2.8e-229	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PAKDJCJJ_02586	9e-74	-	-	-	S	-	-	-	Domain of unknown function (DUF3899)
PAKDJCJJ_02587	1.84e-91	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PAKDJCJJ_02588	5.42e-169	gntR	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
PAKDJCJJ_02589	0.0	xpkA	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
PAKDJCJJ_02590	1.43e-183	yxeH	-	-	S	-	-	-	hydrolase
PAKDJCJJ_02591	0.0	ywfO	-	-	S	ko:K06885	-	ko00000	HD domain protein
PAKDJCJJ_02592	1.89e-192	lipL	2.3.1.200, 2.3.1.204	-	H	ko:K16869,ko:K18821	-	ko00000,ko01000	biotin lipoate A B protein ligase
PAKDJCJJ_02593	2.87e-101	ywiB	-	-	S	-	-	-	Domain of unknown function (DUF1934)
PAKDJCJJ_02594	3.8e-78	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PAKDJCJJ_02595	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PAKDJCJJ_02596	1.82e-40	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
PAKDJCJJ_02597	3.89e-266	-	-	-	-	-	-	-	-
PAKDJCJJ_02598	1.34e-94	-	-	-	K	-	-	-	Transcriptional regulator
PAKDJCJJ_02599	0.0	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
PAKDJCJJ_02600	1.44e-166	budA	4.1.1.5	-	H	ko:K01575	ko00650,ko00660,map00650,map00660	ko00000,ko00001,ko01000	Belongs to the alpha-acetolactate decarboxylase family
PAKDJCJJ_02601	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
PAKDJCJJ_02602	5.13e-121	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
PAKDJCJJ_02603	7.6e-246	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PAKDJCJJ_02604	1.94e-45	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	PFAM restriction modification system DNA specificity domain
PAKDJCJJ_02605	7.97e-284	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
PAKDJCJJ_02606	1.91e-17	-	2.7.8.12	GT2	M	ko:K09809,ko:K19354	-	ko00000,ko01000,ko01003,ko01005	transferase activity, transferring glycosyl groups
PAKDJCJJ_02607	0.0	sftA	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
PAKDJCJJ_02608	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
PAKDJCJJ_02609	8.02e-171	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
PAKDJCJJ_02610	4.23e-153	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
PAKDJCJJ_02611	1.7e-299	-	-	-	F	ko:K03458	-	ko00000	Permease
PAKDJCJJ_02612	0.0	guaD	3.5.4.3	-	F	ko:K01487	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	Amidohydrolase family
PAKDJCJJ_02613	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PAKDJCJJ_02614	4.06e-211	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PAKDJCJJ_02615	4.16e-143	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PAKDJCJJ_02616	4.94e-114	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PAKDJCJJ_02617	4.19e-315	dnaB	-	-	L	ko:K03346	-	ko00000,ko03032	replication initiation and membrane attachment
PAKDJCJJ_02618	9.52e-212	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
PAKDJCJJ_02619	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PAKDJCJJ_02620	2.31e-101	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PAKDJCJJ_02621	5.7e-36	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
PAKDJCJJ_02622	6.09e-72	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PAKDJCJJ_02623	2.6e-134	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
PAKDJCJJ_02624	9.12e-285	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
PAKDJCJJ_02625	1.5e-64	yhbY	-	-	J	ko:K07574	-	ko00000,ko03009	RNA-binding protein
PAKDJCJJ_02626	4.53e-152	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PAKDJCJJ_02627	2.65e-140	yqeK	-	-	H	-	-	-	Hydrolase, HD family
PAKDJCJJ_02628	3.15e-78	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PAKDJCJJ_02629	8.74e-182	yqeM	-	-	Q	-	-	-	Methyltransferase
PAKDJCJJ_02630	7.73e-278	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
PAKDJCJJ_02631	4.1e-124	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
PAKDJCJJ_02632	4.39e-39	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
PAKDJCJJ_02633	3.7e-190	-	3.1.3.23	-	S	ko:K07757	-	ko00000,ko01000	Sucrose-6F-phosphate phosphohydrolase
PAKDJCJJ_02634	9.26e-69	czrA	-	-	K	ko:K22043	-	ko00000,ko03000	Transcriptional regulator, ArsR family
PAKDJCJJ_02635	8.69e-149	-	-	-	O	-	-	-	Zinc-dependent metalloprotease
PAKDJCJJ_02636	4.42e-248	adhP	1.1.1.1	-	C	ko:K00001,ko:K13953	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
PAKDJCJJ_02637	3.25e-154	csrR	-	-	K	-	-	-	response regulator
PAKDJCJJ_02640	1.77e-08	-	-	-	K	ko:K07729	-	ko00000,ko03000	PFAM Helix-turn-helix
PAKDJCJJ_02641	1.11e-34	-	-	-	K	-	-	-	Helix-turn-helix
PAKDJCJJ_02642	1.03e-96	-	-	-	S	-	-	-	Pfam:Peptidase_M78
PAKDJCJJ_02644	1.2e-34	-	-	-	-	-	-	-	-
PAKDJCJJ_02645	1.47e-22	-	-	-	-	-	-	-	-
PAKDJCJJ_02646	3.62e-25	-	-	-	-	-	-	-	-
PAKDJCJJ_02647	1.83e-45	-	-	-	-	-	-	-	-
PAKDJCJJ_02648	1.14e-59	-	-	-	-	-	-	-	-
PAKDJCJJ_02649	9.31e-95	-	-	-	S	-	-	-	Domain of unknown function DUF1829
PAKDJCJJ_02652	2.61e-168	int7	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PAKDJCJJ_02653	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PAKDJCJJ_02654	0.0	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PAKDJCJJ_02655	1.02e-46	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PAKDJCJJ_02656	8.72e-301	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
PAKDJCJJ_02657	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PAKDJCJJ_02658	8.25e-25	dltX	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
PAKDJCJJ_02659	1.16e-247	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PAKDJCJJ_02660	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
PAKDJCJJ_02661	2.51e-123	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PAKDJCJJ_02662	8.18e-243	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PAKDJCJJ_02663	4.27e-85	-	-	-	-	-	-	-	-
PAKDJCJJ_02665	2.46e-46	-	-	-	S	-	-	-	protein disulfide oxidoreductase activity
PAKDJCJJ_02666	1.8e-17	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PAKDJCJJ_02667	1.04e-127	-	-	-	S	-	-	-	DNA binding
PAKDJCJJ_02668	1.35e-276	-	-	-	E	ko:K03758	-	ko00000,ko02000	Amino acid permease
PAKDJCJJ_02669	3.97e-177	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
PAKDJCJJ_02670	4.14e-214	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PAKDJCJJ_02671	2.62e-89	-	-	-	L	ko:K07483,ko:K07497	-	ko00000	Helix-turn-helix domain
PAKDJCJJ_02672	3.07e-143	-	-	-	L	ko:K07497	-	ko00000	PFAM Integrase catalytic region
PAKDJCJJ_02673	7.35e-11	ypjC	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PAKDJCJJ_02674	5.97e-285	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PAKDJCJJ_02675	0.0	yfmR	-	-	S	ko:K15738	-	ko00000,ko02000	ABC transporter, ATP-binding protein
PAKDJCJJ_02676	3.88e-240	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PAKDJCJJ_02677	1.67e-115	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PAKDJCJJ_02678	6.54e-267	-	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PAKDJCJJ_02679	2.53e-173	cat	2.3.1.28	-	V	ko:K19271	-	br01600,ko00000,ko01000,ko01504	Chloramphenicol acetyltransferase
PAKDJCJJ_02680	2.38e-80	-	-	-	S	-	-	-	LuxR family transcriptional regulator
PAKDJCJJ_02681	4.01e-185	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2087)
PAKDJCJJ_02682	5.76e-304	-	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAKDJCJJ_02683	6.68e-198	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
PAKDJCJJ_02684	7.18e-193	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PAKDJCJJ_02685	7.94e-126	-	-	-	-	-	-	-	-
PAKDJCJJ_02686	6.95e-10	-	-	-	-	-	-	-	-
PAKDJCJJ_02687	1.06e-229	iunH1	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	nucleoside hydrolase
PAKDJCJJ_02688	2.86e-244	-	-	-	S	-	-	-	Protease prsW family
PAKDJCJJ_02689	1.7e-186	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
PAKDJCJJ_02690	4.49e-233	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
PAKDJCJJ_02691	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PAKDJCJJ_02692	2.32e-159	pgm3	-	-	G	-	-	-	phosphoglycerate mutase family
PAKDJCJJ_02693	3.26e-101	yyaT	-	-	K	ko:K02348	-	ko00000	protein acetylation
PAKDJCJJ_02694	3.35e-89	lytE	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family
PAKDJCJJ_02695	1.69e-107	-	-	-	K	-	-	-	MerR family regulatory protein
PAKDJCJJ_02696	3.27e-118	-	-	-	K	-	-	-	Transcriptional regulator PadR-like family
PAKDJCJJ_02697	0.0	ydiC1	-	-	EGP	-	-	-	Major Facilitator
PAKDJCJJ_02698	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
PAKDJCJJ_02699	2.21e-21	-	-	-	-	-	-	-	-
PAKDJCJJ_02700	2.77e-172	-	1.1.1.304, 1.1.1.76	-	IQ	ko:K03366	ko00650,map00650	ko00000,ko00001,ko01000	reductase
PAKDJCJJ_02701	2.62e-238	-	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PAKDJCJJ_02702	1.15e-234	-	-	-	S	-	-	-	DUF218 domain
PAKDJCJJ_02703	7.21e-143	acmA	-	-	NU	-	-	-	mannosyl-glycoprotein
PAKDJCJJ_02704	1.06e-312	-	3.4.16.4	-	V	ko:K01286	-	ko00000,ko01000	SH3-like domain
PAKDJCJJ_02705	8.53e-165	-	-	-	P	-	-	-	integral membrane protein, YkoY family
PAKDJCJJ_02706	4.19e-205	glxR	1.1.1.31	-	I	ko:K00020	ko00280,ko01100,map00280,map01100	ko00000,ko00001,ko01000	Dehydrogenase
PAKDJCJJ_02708	1.14e-177	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PAKDJCJJ_02709	1.27e-196	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PAKDJCJJ_02710	1.38e-227	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
PAKDJCJJ_02711	3.6e-210	-	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
PAKDJCJJ_02712	9.9e-216	XK27_00670	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
PAKDJCJJ_02713	2.84e-215	WQ51_06230	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PAKDJCJJ_02714	1.14e-155	-	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PAKDJCJJ_02715	2.69e-158	XK27_07075	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PAKDJCJJ_02716	1.57e-89	-	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PAKDJCJJ_02717	0.0	-	-	-	S	-	-	-	ABC transporter, ATP-binding protein
PAKDJCJJ_02718	4.19e-113	yciB	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
PAKDJCJJ_02719	9.02e-228	-	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
PAKDJCJJ_02720	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PAKDJCJJ_02721	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
PAKDJCJJ_02722	4.67e-95	apfA	3.6.1.61	-	F	ko:K18445	ko00230,map00230	ko00000,ko00001,ko01000	Nudix hydrolase
PAKDJCJJ_02723	1.3e-97	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase
PAKDJCJJ_02724	2.62e-109	zur	-	-	P	ko:K02076,ko:K03711	-	ko00000,ko03000	Belongs to the Fur family
PAKDJCJJ_02725	4.52e-47	-	3.2.1.14	GH18	-	ko:K01183	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	-
PAKDJCJJ_02726	1.13e-220	-	-	-	-	-	-	-	-
PAKDJCJJ_02727	8.35e-175	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PAKDJCJJ_02728	4.49e-195	glnH	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PAKDJCJJ_02729	1.5e-142	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PAKDJCJJ_02730	1.13e-140	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PAKDJCJJ_02731	1.19e-296	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PAKDJCJJ_02732	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
PAKDJCJJ_02733	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
PAKDJCJJ_02734	7.11e-203	oppB	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PAKDJCJJ_02741	4.32e-107	recT	-	-	L	ko:K07455	-	ko00000,ko03400	RecT family
PAKDJCJJ_02742	5.46e-54	pi112	-	-	L	-	-	-	PDDEXK-like domain of unknown function (DUF3799)
PAKDJCJJ_02744	4.78e-67	-	-	-	K	ko:K07741	-	ko00000	AntA/AntB antirepressor
PAKDJCJJ_02745	4.84e-55	-	-	-	S	-	-	-	Endodeoxyribonuclease RusA
PAKDJCJJ_02748	2.63e-104	-	-	-	S	-	-	-	Phage transcriptional regulator, ArpU family
PAKDJCJJ_02751	2.61e-70	-	-	-	-	-	-	-	-
PAKDJCJJ_02753	1.39e-144	-	-	-	L	ko:K07474	-	ko00000	Terminase small subunit
PAKDJCJJ_02754	1.26e-137	-	-	-	L	-	-	-	Integrase
PAKDJCJJ_02755	0.0	-	-	-	S	-	-	-	Terminase-like family
PAKDJCJJ_02756	0.0	-	-	-	S	-	-	-	Phage portal protein, SPP1 Gp6-like
PAKDJCJJ_02757	1.22e-201	-	-	-	S	-	-	-	head morphogenesis protein, SPP1 gp7 family
PAKDJCJJ_02758	3.91e-136	-	-	-	S	-	-	-	Domain of unknown function (DUF4355)
PAKDJCJJ_02759	1.73e-89	-	-	-	-	-	-	-	-
PAKDJCJJ_02760	1.02e-261	-	-	-	S	-	-	-	Phage major capsid protein E
PAKDJCJJ_02762	4.9e-116	-	-	-	-	-	-	-	-
PAKDJCJJ_02765	2.47e-112	-	-	-	-	-	-	-	-
PAKDJCJJ_02766	1.02e-278	-	-	-	S	-	-	-	Protein of unknown function (DUF3383)
PAKDJCJJ_02767	8.99e-114	-	-	-	-	-	-	-	-
PAKDJCJJ_02769	0.0	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
PAKDJCJJ_02770	4.28e-278	-	-	-	M	-	-	-	LysM domain
PAKDJCJJ_02771	4.84e-89	-	-	-	-	-	-	-	-
PAKDJCJJ_02772	1.43e-223	-	-	-	-	-	-	-	-
PAKDJCJJ_02773	1.41e-79	-	-	-	-	-	-	-	-
PAKDJCJJ_02774	2.22e-49	-	-	-	S	-	-	-	Protein of unknown function (DUF2634)
PAKDJCJJ_02775	1.11e-261	-	-	-	S	-	-	-	Baseplate J-like protein
PAKDJCJJ_02776	5.82e-116	-	-	-	-	-	-	-	-
PAKDJCJJ_02777	1.95e-52	-	-	-	-	-	-	-	-
PAKDJCJJ_02778	1.7e-42	-	-	-	-	-	-	-	-