ORF_ID e_value Gene_name EC_number CAZy COGs KEGG_ko KEGG_Pathway BRITE Description
PDCPOIID_00001 0.0 prtP 3.4.21.96 - O ko:K01361 - ko00000,ko01000,ko01002,ko03110 Belongs to the peptidase S8 family
PDCPOIID_00002 7.68e-116 - - - - - - - -
PDCPOIID_00003 7.61e-269 - - - - ko:K01992 - ko00000,ko00002,ko02000 -
PDCPOIID_00004 9.28e-179 - - - V - - - ATPases associated with a variety of cellular activities
PDCPOIID_00005 1.64e-249 - 2.7.13.3 - T ko:K20487 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PDCPOIID_00006 1.28e-162 - - - K ko:K20488 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko02022 Transcriptional regulatory protein, C terminal
PDCPOIID_00007 0.0 - - - S - - - Psort location CytoplasmicMembrane, score
PDCPOIID_00008 1.6e-162 XK27_12140 - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
PDCPOIID_00009 6.84e-253 - 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
PDCPOIID_00010 1.39e-233 - - - M - - - LPXTG cell wall anchor motif
PDCPOIID_00012 1.89e-167 - - - S - - - Protein of unknown function C-terminus (DUF2399)
PDCPOIID_00013 0.0 - - - D - - - Putative exonuclease SbcCD, C subunit
PDCPOIID_00014 2.37e-174 - - - - - - - -
PDCPOIID_00015 1.95e-284 - - - - - - - -
PDCPOIID_00016 1.83e-61 - - - S - - - Protein of unknown function (DUF2568)
PDCPOIID_00017 1.79e-87 - - - K - - - helix_turn_helix, mercury resistance
PDCPOIID_00018 3.17e-267 - - - - - - - -
PDCPOIID_00019 7.71e-14 srlM - - GKT ko:K03491 - ko00000,ko03000 Mga helix-turn-helix domain
PDCPOIID_00020 2.63e-115 srlM1 - - K - - - Glucitol operon activator protein (GutM)
PDCPOIID_00021 2.36e-130 srlA - - G ko:K02783 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko02000 PTS system enzyme II sorbitol-specific factor
PDCPOIID_00022 2.82e-259 srlE 2.7.1.198 - G ko:K02782,ko:K02783 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Sorbitol phosphotransferase enzyme II N-terminus
PDCPOIID_00023 9.11e-84 - 2.7.1.198 - G ko:K02781 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system glucitol/sorbitol-specific IIA component
PDCPOIID_00024 8.74e-161 - - - H - - - Pfam:Transaldolase
PDCPOIID_00025 5.11e-40 cps1C - - S ko:K03328 - ko00000 Membrane protein involved in the export of O-antigen and teichoic acid
PDCPOIID_00026 7.45e-53 - - - M - - - Glycosyl transferases group 1
PDCPOIID_00027 0.000258 - - - M ko:K07011 - ko00000 Glycosyl transferase family group 2
PDCPOIID_00028 5.8e-85 - - - M ko:K07271 - ko00000,ko01000 LicD family
PDCPOIID_00029 2.54e-48 - - - S - - - Acetyltransferase (Isoleucine patch superfamily)
PDCPOIID_00030 2.15e-56 - - - M - - - Capsular polysaccharide synthesis protein
PDCPOIID_00031 2.7e-190 rgpAc - GT4 M ko:K12996 - ko00000,ko01000,ko01003,ko01005 Domain of unknown function (DUF1972)
PDCPOIID_00032 6.01e-138 ywqD - - D - - - Capsular exopolysaccharide family
PDCPOIID_00033 7e-155 epsB - - M - - - biosynthesis protein
PDCPOIID_00034 1.23e-168 - - - E - - - lipolytic protein G-D-S-L family
PDCPOIID_00035 9.9e-105 ccl - - S - - - QueT transporter
PDCPOIID_00036 4.96e-158 fabG 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Enoyl-(Acyl carrier protein) reductase
PDCPOIID_00037 2.98e-49 XK27_01315 - - S - - - Protein of unknown function (DUF2829)
PDCPOIID_00038 6.56e-64 - - - K - - - sequence-specific DNA binding
PDCPOIID_00039 3.57e-150 gpm5 - - G - - - Phosphoglycerate mutase family
PDCPOIID_00040 2.59e-229 oppF - - P ko:K10823 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
PDCPOIID_00041 5.82e-250 oppD - - P ko:K02031,ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
PDCPOIID_00042 3.01e-227 oppC - - EP ko:K15582 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PDCPOIID_00043 1.4e-208 oppB - - P ko:K15581 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PDCPOIID_00044 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PDCPOIID_00045 0.0 - - - EGP - - - Major Facilitator Superfamily
PDCPOIID_00046 4.1e-130 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PDCPOIID_00047 1.34e-170 lutC - - S ko:K00782 - ko00000 LUD domain
PDCPOIID_00048 0.0 lutB - - C ko:K18929 - ko00000 4Fe-4S dicluster domain
PDCPOIID_00049 1.7e-190 lutA - - C ko:K18928 - ko00000 Cysteine-rich domain
PDCPOIID_00050 1.96e-108 - - - - - - - -
PDCPOIID_00051 7.37e-67 - 2.7.1.196, 2.7.1.205 - G ko:K02759 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphotransferase system cellobiose-specific component IIA
PDCPOIID_00052 4.92e-266 ybhE - - S ko:K09963 - ko00000 Bacterial protein of unknown function (DUF871)
PDCPOIID_00053 4.64e-90 - - - S - - - Domain of unknown function (DUF3284)
PDCPOIID_00055 0.0 chbC - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDCPOIID_00056 1.92e-61 dtd - - J ko:K07560 - ko00000,ko01000,ko03016 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PDCPOIID_00057 4.52e-149 - - - J - - - HAD-hyrolase-like
PDCPOIID_00058 3.28e-313 lytH 3.5.1.28 - M ko:K01448 ko01503,map01503 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 N-acetylmuramoyl-L-alanine amidase
PDCPOIID_00059 6.52e-107 - - - FG - - - adenosine 5'-monophosphoramidase activity
PDCPOIID_00060 1.98e-200 - - - V - - - ABC transporter
PDCPOIID_00061 0.0 - - - - - - - -
PDCPOIID_00062 5.67e-191 - - - K - - - Helix-turn-helix
PDCPOIID_00063 1.04e-99 - - - - - - - -
PDCPOIID_00064 7.04e-217 - - - C - - - nadph quinone reductase
PDCPOIID_00065 1.59e-47 XK27_04345 3.6.1.1 - C ko:K01507 ko00190,map00190 ko00000,ko00001,ko01000 Inorganic pyrophosphatase
PDCPOIID_00066 2.67e-310 hisS 6.1.1.21 - J ko:K01892 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 histidyl-tRNA synthetase
PDCPOIID_00067 0.0 aspS 6.1.1.12 - J ko:K01876 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PDCPOIID_00068 6.22e-107 msrB 1.8.4.12 - O ko:K07305 - ko00000,ko01000 peptide methionine sulfoxide reductase
PDCPOIID_00069 3.1e-216 yitT - - S - - - Uncharacterised 5xTM membrane BCR, YitT family COG1284
PDCPOIID_00070 3.78e-205 nfo 3.1.21.2 - L ko:K01151 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PDCPOIID_00071 8.44e-199 yqfL 2.7.11.33, 2.7.4.28 - F ko:K09773 - ko00000,ko01000 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PDCPOIID_00072 3.98e-29 rpsU - - J ko:K02970 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bS21 family
PDCPOIID_00073 1.81e-88 yqeY - - S ko:K09117 - ko00000 YqeY-like protein
PDCPOIID_00075 3.81e-228 phoH - - T ko:K06217 - ko00000 phosphate starvation-inducible protein PhoH
PDCPOIID_00076 1.03e-106 ybeY - - S ko:K07042 - ko00000,ko03009 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PDCPOIID_00077 6.78e-82 dgkA 2.7.1.107, 2.7.1.66 - M ko:K00887,ko:K00901 ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231 ko00000,ko00001,ko01000 Diacylglycerol kinase
PDCPOIID_00078 1.38e-84 cdd 3.5.4.5 - F ko:K01489 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
PDCPOIID_00079 2.76e-216 era - - S ko:K03595 - ko00000,ko03009,ko03029 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PDCPOIID_00080 2.87e-181 recO - - L ko:K03584 ko03440,map03440 ko00000,ko00001,ko03400 Involved in DNA repair and RecF pathway recombination
PDCPOIID_00081 3.64e-70 - - - - - - - -
PDCPOIID_00082 4.99e-72 - - - - - - - -
PDCPOIID_00083 5.85e-111 - - - M - - - Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
PDCPOIID_00084 9.76e-265 - - - N - - - domain, Protein
PDCPOIID_00085 0.0 - 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PDCPOIID_00086 0.0 bglH - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
PDCPOIID_00087 2.49e-191 licT2 - - K ko:K03488 - ko00000,ko03000 CAT RNA binding domain
PDCPOIID_00088 0.0 - - - S - - - Bacterial membrane protein YfhO
PDCPOIID_00089 0.0 - - - S - - - Psort location CytoplasmicMembrane, score
PDCPOIID_00090 3.35e-217 yfdH - GT2 M ko:K12999 - ko00000,ko01000,ko01003,ko01005 Glycosyltransferase, group 2 family protein
PDCPOIID_00091 5.17e-134 - - - - - - - -
PDCPOIID_00092 8.49e-217 yqjA - - S - - - Putative aromatic acid exporter C-terminal domain
PDCPOIID_00093 6.22e-43 cspC - - K ko:K03704 - ko00000,ko03000 Cold shock protein
PDCPOIID_00094 1.38e-108 yvbK - - K - - - GNAT family
PDCPOIID_00095 1.45e-149 acmA 3.2.1.17, 3.2.1.96 - NU ko:K01185,ko:K01227 ko00511,map00511 ko00000,ko00001,ko01000 mannosyl-glycoprotein
PDCPOIID_00096 2.27e-132 xpt 2.4.2.22 - F ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000 Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PDCPOIID_00097 6.23e-303 pbuX - - F ko:K03458,ko:K16169 - ko00000,ko02000 xanthine permease
PDCPOIID_00098 6.67e-261 purK2 6.3.4.18 - F ko:K01589 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PDCPOIID_00099 9.74e-315 purB 4.3.2.2 - F ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PDCPOIID_00100 4.43e-135 - - - - - - - -
PDCPOIID_00101 6.04e-137 - - - - - - - -
PDCPOIID_00102 0.0 ltaS 2.7.8.20 - M ko:K19005 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PDCPOIID_00103 5.32e-142 vanZ - - V - - - VanZ like family
PDCPOIID_00104 1.9e-195 glcU - - U ko:K05340 - ko00000,ko02000 sugar transport
PDCPOIID_00105 0.0 pgi 5.3.1.9 - G ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GPI family
PDCPOIID_00106 6.02e-85 - - - S - - - Domain of unknown function DUF1829
PDCPOIID_00107 5.22e-63 - - - S - - - Domain of unknown function DUF1829
PDCPOIID_00108 1.18e-60 ycnE - - S - - - Antibiotic biosynthesis monooxygenase
PDCPOIID_00110 6.61e-195 - - - F ko:K15051 - ko00000 DNA/RNA non-specific endonuclease
PDCPOIID_00111 4.8e-104 - - - S - - - Pfam Transposase IS66
PDCPOIID_00112 2.27e-293 - - GT2,GT4 M ko:K20444 - ko00000,ko01000,ko01005,ko02000 Glycosyl transferases group 1
PDCPOIID_00113 2.56e-219 ysjB - - S ko:K03810 - ko00000 Oxidoreductase family, NAD-binding Rossmann fold
PDCPOIID_00114 5.68e-110 guaD - - FJ - - - MafB19-like deaminase
PDCPOIID_00116 6.05e-103 tspO - - T ko:K05770 ko04080,ko04214,ko04979,ko05166,map04080,map04214,map04979,map05166 ko00000,ko00001,ko02000 TspO/MBR family
PDCPOIID_00117 1.53e-19 - - - - - - - -
PDCPOIID_00118 1.04e-269 yttB - - EGP - - - Major Facilitator
PDCPOIID_00119 4.36e-136 - - - S - - - Protein of unknown function (DUF1211)
PDCPOIID_00120 0.0 pepD2 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
PDCPOIID_00123 4.1e-163 pgm7 - - G - - - Phosphoglycerate mutase family
PDCPOIID_00124 6.41e-155 - - - K - - - Bacterial regulatory proteins, tetR family
PDCPOIID_00125 0.0 ycfI - - V ko:K06147 - ko00000,ko02000 ABC transporter, ATP-binding protein
PDCPOIID_00126 0.0 yfiC - - V ko:K06147 - ko00000,ko02000 ABC transporter
PDCPOIID_00127 1.58e-42 rafA 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 alpha-galactosidase
PDCPOIID_00130 9.31e-93 - - - S - - - SdpI/YhfL protein family
PDCPOIID_00131 3.55e-174 yclJ - - K ko:K02483 - ko00000,ko02022 response regulator
PDCPOIID_00132 0.0 yclK - - T - - - Histidine kinase
PDCPOIID_00133 1.56e-95 - - - S - - - acetyltransferase
PDCPOIID_00134 7.39e-20 - - - - - - - -
PDCPOIID_00135 7.36e-94 pheB 5.4.99.5 - S ko:K06209 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the UPF0735 family
PDCPOIID_00136 1.53e-88 - - - - - - - -
PDCPOIID_00137 2.46e-73 - - - - - - - -
PDCPOIID_00138 0.0 polYB 2.7.7.7 - L ko:K02346,ko:K03502 - ko00000,ko01000,ko03400 Belongs to the DNA polymerase type-Y family
PDCPOIID_00140 1.78e-266 tcaA - - S ko:K21463 - ko00000 response to antibiotic
PDCPOIID_00141 8.27e-179 - 3.1.1.5 - E ko:K10804 ko01040,map01040 ko00000,ko00001,ko01000,ko01004 GDSL-like Lipase/Acylhydrolase
PDCPOIID_00142 1.62e-45 - - - S - - - Bacterial protein of unknown function (DUF898)
PDCPOIID_00144 0.0 pcrA 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase
PDCPOIID_00145 0.0 ligA 6.5.1.2 - L ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 ko00000,ko00001,ko01000,ko03032,ko03400 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PDCPOIID_00146 4.96e-270 camS - - S - - - sex pheromone
PDCPOIID_00147 3.61e-61 gatC 6.3.5.6, 6.3.5.7 - J ko:K02435 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PDCPOIID_00148 0.0 gatA 6.3.5.6, 6.3.5.7 - J ko:K02433 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PDCPOIID_00149 0.0 gatB 6.3.5.6, 6.3.5.7 - J ko:K02434 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PDCPOIID_00150 4.97e-248 dagK 2.7.1.107 - G ko:K07029 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko01000 Lipid kinase
PDCPOIID_00151 0.0 rumA_2 2.1.1.190 - J ko:K03215 - ko00000,ko01000,ko03009 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PDCPOIID_00152 9.19e-213 ybhF_1 - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
PDCPOIID_00153 0.0 - - - M ko:K01992 - ko00000,ko00002,ko02000 Exporter of polyketide antibiotics
PDCPOIID_00154 1.98e-147 - - - K ko:K09017 - ko00000,ko03000 Transcriptional regulator
PDCPOIID_00155 0.0 - - - EGP - - - Major Facilitator
PDCPOIID_00156 5.77e-161 - - - S ko:K07090 - ko00000 membrane transporter protein
PDCPOIID_00157 3.69e-234 - - - K - - - Helix-turn-helix XRE-family like proteins
PDCPOIID_00158 4.73e-209 - - - S - - - Alpha beta hydrolase
PDCPOIID_00159 4.71e-81 lexA - - K ko:K07979 - ko00000,ko03000 Transcriptional regulator, GntR family
PDCPOIID_00160 1.54e-159 yhcG - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
PDCPOIID_00161 1.32e-15 - - - - - - - -
PDCPOIID_00162 2.35e-172 - - - - - - - -
PDCPOIID_00163 1.5e-112 - - - V ko:K02003 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
PDCPOIID_00164 4.77e-122 ydaF - - J ko:K03817 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
PDCPOIID_00165 1.71e-206 - - - P ko:K10823 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Oligopeptide/dipeptide transporter, C-terminal region
PDCPOIID_00166 6.86e-255 - - - P ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Oligopeptide/dipeptide transporter, C-terminal region
PDCPOIID_00168 2.97e-220 - - - EP ko:K02034,ko:K15582 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PDCPOIID_00169 1.71e-214 - - - P ko:K15581 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PDCPOIID_00170 0.0 - - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding proteins, family 5 Middle
PDCPOIID_00171 1.98e-163 - - - S - - - DJ-1/PfpI family
PDCPOIID_00172 2.12e-70 - - - K - - - Transcriptional
PDCPOIID_00173 1.07e-48 - - - - - - - -
PDCPOIID_00174 0.0 - - - V - - - ABC transporter transmembrane region
PDCPOIID_00175 0.0 - - - V ko:K06147,ko:K06148,ko:K11085,ko:K18889 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter transmembrane region
PDCPOIID_00177 3.24e-89 - - - S - - - Iron-sulphur cluster biosynthesis
PDCPOIID_00178 7.96e-20 - 2.7.1.39 - S ko:K02204 ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Phosphotransferase enzyme family
PDCPOIID_00179 0.0 - - - M - - - LysM domain
PDCPOIID_00180 3.94e-172 zmp3 - - O - - - Zinc-dependent metalloprotease
PDCPOIID_00181 5.99e-168 - - - K - - - DeoR C terminal sensor domain
PDCPOIID_00183 4.48e-67 lciIC - - K - - - Helix-turn-helix domain
PDCPOIID_00184 1.39e-123 yjdB - - S - - - Domain of unknown function (DUF4767)
PDCPOIID_00185 1.16e-68 - 2.7.11.1 - KLT ko:K12132 - ko00000,ko01000,ko01001 Protein tyrosine kinase
PDCPOIID_00187 6.19e-37 - - - L - - - Transposase DDE domain
PDCPOIID_00189 9.75e-85 - - - - - - - -
PDCPOIID_00190 0.0 - - - L - - - Protein of unknown function (DUF3991)
PDCPOIID_00191 6.91e-203 yvfR - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
PDCPOIID_00192 1.97e-125 XK27_09830 - - V ko:K01992 - ko00000,ko00002,ko02000 ABC-2 type transporter
PDCPOIID_00193 5.49e-261 desK 2.7.13.3 - T ko:K07778 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
PDCPOIID_00194 8.42e-135 desR - - K ko:K02479,ko:K07693 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 helix_turn_helix, Lux Regulon
PDCPOIID_00195 3.99e-197 degV - - S - - - Uncharacterised protein, DegV family COG1307
PDCPOIID_00196 1.76e-114 - - - K - - - Acetyltransferase (GNAT) domain
PDCPOIID_00197 1.12e-209 - - - K - - - Acetyltransferase (GNAT) domain
PDCPOIID_00198 8.39e-144 - - - GM - - - NAD(P)H-binding
PDCPOIID_00199 1.07e-72 yphJ 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 decarboxylase
PDCPOIID_00200 5.48e-102 yphH - - S - - - Cupin domain
PDCPOIID_00201 1.57e-202 - - - K - - - Transcriptional regulator
PDCPOIID_00202 5.16e-142 - - - S ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
PDCPOIID_00203 9.6e-217 bcrA - - V ko:K01990,ko:K19309 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 AAA domain, putative AbiEii toxin, Type IV TA system
PDCPOIID_00204 2.91e-148 flp - - K ko:K21562 - ko00000,ko03000 helix_turn_helix, cAMP Regulatory protein
PDCPOIID_00205 4.72e-128 dpsB - - P - - - Belongs to the Dps family
PDCPOIID_00206 2.09e-45 copZ - - P - - - Heavy-metal-associated domain
PDCPOIID_00207 0.0 cadA 3.6.3.3, 3.6.3.5 - P ko:K01534 - ko00000,ko01000 P-type ATPase
PDCPOIID_00209 0.000666 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
PDCPOIID_00210 7.8e-282 opuCA - - E ko:K05847 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, ATP-binding protein
PDCPOIID_00211 2.28e-136 opuCB - - E ko:K05846 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PDCPOIID_00212 1.02e-221 opuCC - - M ko:K05845 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PDCPOIID_00213 3.23e-141 opuCD - - P ko:K05846 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PDCPOIID_00215 2.34e-140 - - - K ko:K22106 - ko00000,ko03000 Tetracycline repressor, C-terminal all-alpha domain
PDCPOIID_00216 0.0 ydgH - - S ko:K06994 - ko00000 MMPL family
PDCPOIID_00218 2.19e-306 - - - EGP - - - Major Facilitator
PDCPOIID_00219 1.5e-219 - - - V ko:K06147,ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
PDCPOIID_00220 0.0 treB - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
PDCPOIID_00221 0.0 treC 3.2.1.93 GH13 G ko:K01226 ko00500,map00500 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain protein
PDCPOIID_00222 4.99e-163 treR - - K ko:K03486 - ko00000,ko03000 UTRA
PDCPOIID_00223 2.27e-247 - - - L ko:K07482 - ko00000 PFAM Integrase, catalytic core
PDCPOIID_00225 5.45e-146 alkD - - L - - - DNA alkylation repair enzyme
PDCPOIID_00226 2.92e-162 rpiA 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PDCPOIID_00227 2.45e-61 - - - M - - - 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PDCPOIID_00229 1.08e-215 galU 2.7.7.9 - M ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 UTP-glucose-1-phosphate uridylyltransferase
PDCPOIID_00230 1.09e-253 mvaK2 2.7.4.2 - I ko:K00938 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 phosphomevalonate kinase
PDCPOIID_00231 1.02e-20 - - - - - - - -
PDCPOIID_00233 7.16e-257 - - - M - - - Glycosyltransferase like family 2
PDCPOIID_00234 1.16e-204 map 3.4.11.18 - E ko:K01265 - ko00000,ko01000,ko01002 Methionine Aminopeptidase
PDCPOIID_00235 1.24e-103 fld - - C ko:K03839 - ko00000 Flavodoxin
PDCPOIID_00236 9.73e-230 rbn - - S ko:K07058 - ko00000 Belongs to the UPF0761 family
PDCPOIID_00237 0.0 - - - S ko:K13730 ko05100,map05100 ko00000,ko00001 Uncharacterized protein conserved in bacteria (DUF2252)
PDCPOIID_00239 2.96e-144 - - - K - - - Bacterial regulatory proteins, tetR family
PDCPOIID_00240 5.51e-304 pepS - - E ko:K19689 - ko00000,ko01000,ko01002 Thermophilic metalloprotease (M29)
PDCPOIID_00241 0.0 recQ 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
PDCPOIID_00242 7.67e-07 - - - - - - - -
PDCPOIID_00244 6.37e-93 - - - S - - - Domain of unknown function (DUF3284)
PDCPOIID_00245 2.76e-74 chbA 2.7.1.196, 2.7.1.205 - G ko:K02759 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphoenolpyruvate-dependent sugar phosphotransferase system
PDCPOIID_00246 4.41e-289 yfmL - - L - - - DEAD DEAH box helicase
PDCPOIID_00247 1.55e-226 mocA - - S - - - Oxidoreductase
PDCPOIID_00248 1.9e-79 - - - S - - - Domain of unknown function (DUF4828)
PDCPOIID_00249 9.39e-80 - - - S - - - Protein of unknown function (DUF1093)
PDCPOIID_00250 8.06e-177 - - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
PDCPOIID_00251 1.24e-39 - - - - - - - -
PDCPOIID_00252 3.38e-166 hflC - - O ko:K04087 - ko00000,ko00002,ko01000 prohibitin homologues
PDCPOIID_00253 3.34e-212 yitS - - S - - - Uncharacterised protein, DegV family COG1307
PDCPOIID_00254 4.04e-103 - - - K - - - Acetyltransferase (GNAT) family
PDCPOIID_00255 4.05e-107 - - - EGP - - - Major Facilitator
PDCPOIID_00256 1.41e-171 - - - EGP - - - Major Facilitator
PDCPOIID_00257 0.0 pepO - - O ko:K07386 - ko00000,ko01000,ko01002 Peptidase family M13
PDCPOIID_00258 1.41e-209 - - - S - - - Polyphosphate nucleotide phosphotransferase, PPK2 family
PDCPOIID_00259 1.2e-188 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
PDCPOIID_00260 6.51e-281 yttB - - EGP - - - Major Facilitator
PDCPOIID_00261 7.95e-57 - - - - - - - -
PDCPOIID_00262 3.41e-160 tnp1216 - - L ko:K07498 - ko00000 DDE domain
PDCPOIID_00264 4.16e-149 - - - L - - - Initiator Replication protein
PDCPOIID_00265 3.1e-112 - - - V ko:K06147,ko:K06148 - ko00000,ko02000 ABC transporter transmembrane region
PDCPOIID_00266 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter
PDCPOIID_00267 0.0 malL 3.2.1.10 GH13 G ko:K01182 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain protein
PDCPOIID_00268 8.75e-90 - 2.7.1.191 - G ko:K02793 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system fructose IIA component
PDCPOIID_00269 6.54e-170 - - - G - - - Belongs to the glycosyl hydrolase 31 family
PDCPOIID_00270 7.33e-210 apbE 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PDCPOIID_00271 2.73e-140 - - - S - - - NADPH-dependent FMN reductase
PDCPOIID_00272 4.25e-309 XK27_09615 1.5.1.36 - S ko:K19784,ko:K22393 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 reductase
PDCPOIID_00273 1.89e-294 serS 6.1.1.11 - J ko:K01875 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PDCPOIID_00274 0.0 - - - K - - - Mga helix-turn-helix domain
PDCPOIID_00275 0.0 - - - K - - - Mga helix-turn-helix domain
PDCPOIID_00276 0.0 lysP - - E ko:K03293,ko:K11733 - ko00000,ko02000 amino acid
PDCPOIID_00278 2.4e-169 budA 4.1.1.5 - Q ko:K01575 ko00650,ko00660,map00650,map00660 ko00000,ko00001,ko01000 Alpha-acetolactate decarboxylase
PDCPOIID_00279 0.0 alsS 2.2.1.6 - EH ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the TPP enzyme family
PDCPOIID_00280 4.81e-127 - - - - - - - -
PDCPOIID_00281 8.44e-128 yjcK 2.3.1.128 - J ko:K03790 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
PDCPOIID_00282 3.35e-246 - - - S - - - Protein of unknown function C-terminal (DUF3324)
PDCPOIID_00283 8.02e-114 - - - - - - - -
PDCPOIID_00284 1.43e-25 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL33 family
PDCPOIID_00285 5.98e-150 sodA 1.15.1.1 - C ko:K04564 ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016 ko00000,ko00001,ko01000 Destroys radicals which are normally produced within the cells and which are toxic to biological systems
PDCPOIID_00286 1.21e-205 yjbO 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
PDCPOIID_00287 1.25e-201 - - - I - - - alpha/beta hydrolase fold
PDCPOIID_00288 1.29e-40 - - - - - - - -
PDCPOIID_00289 7.43e-97 - - - - - - - -
PDCPOIID_00290 3.3e-198 citG 2.4.2.52 - H ko:K05966 ko02020,map02020 ko00000,ko00001,ko01000 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PDCPOIID_00291 4.14e-163 citR - - K - - - FCD
PDCPOIID_00292 0.0 oadA 4.1.1.3 - C ko:K01571 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000,ko02000 Conserved carboxylase domain
PDCPOIID_00293 1.42e-120 citX 2.7.7.61 - HI ko:K05964 ko02020,map02020 ko00000,ko00001,ko01000 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
PDCPOIID_00294 0.0 citF 2.8.3.10 - H ko:K01643 ko02020,map02020 ko00000,ko00001,ko01000 Citrate (pro-3S)-lyase alpha chain
PDCPOIID_00295 7.46e-201 citE 4.1.3.34 - G ko:K01644 ko02020,map02020 ko00000,ko00001,ko01000 Belongs to the HpcH HpaI aldolase family
PDCPOIID_00296 3.41e-65 citD - - C ko:K01646 ko02020,map02020 ko00000,ko00001 Covalent carrier of the coenzyme of citrate lyase
PDCPOIID_00297 1.28e-229 citC 6.2.1.22 - H ko:K01910 ko02020,map02020 ko00000,ko00001,ko01000 Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
PDCPOIID_00298 3.26e-07 - - - - - - - -
PDCPOIID_00299 1.87e-249 oadB 4.1.1.3 - C ko:K01572 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000,ko02000 Na+-transporting oxaloacetate decarboxylase beta subunit
PDCPOIID_00300 2.7e-59 oadG - - I - - - Biotin-requiring enzyme
PDCPOIID_00301 2.14e-69 - - - - - - - -
PDCPOIID_00302 1.17e-306 citM - - C ko:K03300 - ko00000 Citrate transporter
PDCPOIID_00303 6.01e-54 - - - - - - - -
PDCPOIID_00304 2.68e-135 kptA - - J ko:K07559 - ko00000,ko01000,ko03016 Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
PDCPOIID_00305 5.57e-110 - - - K - - - GNAT family
PDCPOIID_00306 6.38e-136 - 1.5.1.40 - S ko:K06988 - ko00000,ko01000 NADP oxidoreductase coenzyme F420-dependent
PDCPOIID_00307 1.13e-75 padR - - K ko:K10947 - ko00000,ko03000 Transcriptional regulator PadR-like family
PDCPOIID_00308 4.02e-112 ORF00048 - - - - - - -
PDCPOIID_00309 2.58e-176 nfrA 1.5.1.38 - C ko:K19285 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 nitroreductase
PDCPOIID_00310 1.97e-185 - 3.5.2.6 - V ko:K17836 ko00311,ko01130,ko01501,map00311,map01130,map01501 ko00000,ko00001,ko00002,ko01000,ko01504 Beta-lactamase enzyme family
PDCPOIID_00311 3.08e-243 ykfB 5.1.1.20 - M ko:K19802 - ko00000,ko01000 Belongs to the mandelate racemase muconate lactonizing enzyme family
PDCPOIID_00312 6.03e-247 - - - V - - - Beta-lactamase
PDCPOIID_00313 1.43e-197 murQ 4.2.1.126 - G ko:K07106 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PDCPOIID_00314 3.72e-210 - - - K - - - Helix-turn-helix domain, rpiR family
PDCPOIID_00315 1.37e-104 - 2.7.1.191 - G ko:K02794 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system sorbose subfamily IIB component
PDCPOIID_00316 1.56e-192 - - - G ko:K02796 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system mannose/fructose/sorbose family IID component
PDCPOIID_00317 8.76e-177 XK27_08455 - - G ko:K02795 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system sorbose-specific iic component
PDCPOIID_00318 3.05e-228 - - - S - - - endonuclease exonuclease phosphatase family protein
PDCPOIID_00319 1.97e-28 - - - L - - - manually curated
PDCPOIID_00320 4.9e-98 - - - S - - - Short repeat of unknown function (DUF308)
PDCPOIID_00321 6.66e-19 - - - L ko:K07482 - ko00000 PFAM Integrase, catalytic core
PDCPOIID_00322 4.18e-151 epsG - - M - - - Glycosyltransferase like family 2
PDCPOIID_00323 0.0 glpK 2.7.1.30 - F ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 ko00000,ko00001,ko01000,ko04147 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PDCPOIID_00324 0.0 glpD 1.1.3.21, 1.1.5.3 - C ko:K00105,ko:K00111 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 C-terminal domain of alpha-glycerophosphate oxidase
PDCPOIID_00325 1.34e-170 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
PDCPOIID_00326 1.04e-144 ung2 - - L - - - Uracil-DNA glycosylase
PDCPOIID_00327 5.33e-232 - - - L - - - ATPase domain of DNA mismatch repair MUTS family
PDCPOIID_00328 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter (permease)
PDCPOIID_00329 3.26e-177 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
PDCPOIID_00330 1.57e-159 rrp1 - - K ko:K02483 - ko00000,ko02022 response regulator
PDCPOIID_00331 1.58e-262 - - - T ko:K19168 - ko00000,ko02048 His Kinase A (phosphoacceptor) domain
PDCPOIID_00332 1.54e-141 nrdG 1.97.1.4 - O ko:K04068 - ko00000,ko01000 Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PDCPOIID_00333 0.0 copB 3.6.3.3, 3.6.3.4, 3.6.3.5 - P ko:K01533,ko:K01534 - ko00000,ko01000 P-type ATPase
PDCPOIID_00334 1.17e-100 copR - - K ko:K02171 ko01501,map01501 ko00000,ko00001,ko00002,ko01504,ko03000 Copper transport repressor CopY TcrY
PDCPOIID_00335 1.5e-297 purD 6.3.4.13 - F ko:K01945 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the GARS family
PDCPOIID_00336 0.0 purH 2.1.2.3, 3.5.4.10 - F ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 ko00000,ko00001,ko00002,ko01000,ko04147 Bifunctional purine biosynthesis protein PurH
PDCPOIID_00337 5.57e-129 purN 2.1.2.2 - F ko:K11175 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PDCPOIID_00338 3.28e-233 purM 6.3.3.1 - F ko:K01933 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoribosylformylglycinamidine cyclo-ligase
PDCPOIID_00339 0.0 purF 2.4.2.14 - F ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PDCPOIID_00340 0.0 purL 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PDCPOIID_00341 1.98e-164 purQ 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PDCPOIID_00342 4.91e-54 purS 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PDCPOIID_00343 7.74e-171 purC 6.3.2.6 - F ko:K01923 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the SAICAR synthetase family
PDCPOIID_00344 7.07e-273 purK 6.3.4.18 - F ko:K01589 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PDCPOIID_00345 6.26e-101 purE 5.4.99.18 - F ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PDCPOIID_00346 6.68e-136 thiT - - S ko:K16789 - ko00000,ko02000 Thiamine transporter protein (Thia_YuaJ)
PDCPOIID_00347 0.0 - - - GKT ko:K03491 - ko00000,ko03000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PDCPOIID_00348 9.99e-309 pepT 3.4.11.4 - E ko:K01258 - ko00000,ko01000,ko01002 Cleaves the N-terminal amino acid of tripeptides
PDCPOIID_00349 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PDCPOIID_00350 2.21e-140 - - - S ko:K03824 - ko00000,ko01000 Acetyltransferase (GNAT) family
PDCPOIID_00352 1.31e-122 - - - S ko:K16925 - ko00000,ko00002,ko02000 ABC-type cobalt transport system, permease component
PDCPOIID_00353 3.99e-313 - - - P ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
PDCPOIID_00354 4.64e-143 ykoC - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 cobalt transport
PDCPOIID_00355 1.19e-166 tenA 3.5.99.2 - K ko:K03707 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03000 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
PDCPOIID_00356 5.11e-107 thiW - - S - - - Thiamine-precursor transporter protein (ThiW)
PDCPOIID_00357 7.14e-193 thiM 2.7.1.50 - H ko:K00878 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PDCPOIID_00358 1.67e-135 thiE 2.5.1.3 - H ko:K00788 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PDCPOIID_00359 3.14e-189 thiD 2.7.1.49, 2.7.4.7 - H ko:K00941 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Phosphomethylpyrimidine kinase
PDCPOIID_00360 0.0 - - - E - - - Amino acid permease
PDCPOIID_00361 1.16e-45 - - - - - - - -
PDCPOIID_00362 2.08e-240 rbsR - - K ko:K02529 - ko00000,ko03000 Periplasmic binding proteins and sugar binding domain of LacI family
PDCPOIID_00363 3.66e-85 rbsD 5.4.99.62 - G ko:K06726 ko02010,map02010 ko00000,ko00001,ko01000 Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PDCPOIID_00364 0.0 rbsA 3.6.3.17 - G ko:K10441 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
PDCPOIID_00365 4.84e-198 rbsC - - U ko:K10440 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
PDCPOIID_00366 1.41e-214 rbsB - - G ko:K10439 ko02010,ko02030,map02010,map02030 ko00000,ko00001,ko00002,ko02000 Periplasmic binding protein domain
PDCPOIID_00367 1.34e-207 rbsK 2.7.1.15 - H ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PDCPOIID_00368 3.61e-55 - - - D ko:K19159 - ko00000,ko02048 Antitoxin component of a toxin-antitoxin (TA) module
PDCPOIID_00369 0.0 pbpC - - M ko:K21467 - ko00000,ko01011 NTF2-like N-terminal transpeptidase domain
PDCPOIID_00370 1.86e-304 - - - EGP - - - Major Facilitator
PDCPOIID_00371 3.79e-96 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
PDCPOIID_00372 2.23e-133 - - - - - - - -
PDCPOIID_00373 4.22e-41 - - - - - - - -
PDCPOIID_00382 8.3e-123 sigH - - K ko:K03088,ko:K03091,ko:K12296 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko03000,ko03021 DNA-templated transcription, initiation
PDCPOIID_00383 5.79e-72 ybeC - - E - - - amino acid
PDCPOIID_00384 8.29e-74 - - - - - - - -
PDCPOIID_00385 3.44e-64 - - - - - - - -
PDCPOIID_00386 8.18e-206 - - - - - - - -
PDCPOIID_00387 0.000324 - - - S - - - CsbD-like
PDCPOIID_00388 6.98e-24 dtd - - J ko:K07560 - ko00000,ko01000,ko03016 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PDCPOIID_00389 0.0 relA 2.7.6.5 - KT ko:K00951 ko00230,map00230 ko00000,ko00001,ko01000 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PDCPOIID_00390 2.24e-57 - - - - - - - -
PDCPOIID_00391 3.13e-170 rsmE 2.1.1.193 - J ko:K09761 - ko00000,ko01000,ko03009 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PDCPOIID_00392 7.91e-219 prmA - - J ko:K02687 - ko00000,ko01000,ko03009 Ribosomal protein L11 methyltransferase
PDCPOIID_00393 1.42e-112 XK27_03960 - - S - - - Protein of unknown function (DUF3013)
PDCPOIID_00394 1.68e-134 - 3.2.2.21 - L ko:K03652 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Belongs to the DNA glycosylase MPG family
PDCPOIID_00395 2.23e-50 - - - - - - - -
PDCPOIID_00396 8.05e-88 - - - S - - - Protein of unknown function (DUF1093)
PDCPOIID_00397 6.1e-27 - - - - - - - -
PDCPOIID_00398 1.72e-64 - - - - - - - -
PDCPOIID_00399 1.79e-59 - - - K - - - Acetyltransferase (GNAT) domain
PDCPOIID_00400 7.56e-75 - - - K - - - HxlR-like helix-turn-helix
PDCPOIID_00401 9.7e-253 adh3 - - C - - - Zinc-binding dehydrogenase
PDCPOIID_00402 6.47e-209 - - - S - - - reductase
PDCPOIID_00403 1.68e-98 - - - K - - - helix_turn_helix, mercury resistance
PDCPOIID_00404 1.3e-97 rfbP - - M ko:K13012,ko:K19428 - ko00000,ko01000,ko01005 Bacterial sugar transferase
PDCPOIID_00405 7.99e-184 plnD - - K ko:K07707 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko02022 LytTr DNA-binding domain
PDCPOIID_00406 1.35e-174 - 2.7.13.3 - T ko:K02476,ko:K07706 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 protein histidine kinase activity
PDCPOIID_00409 0.0 iolT - - EGP ko:K06609 - ko00000,ko02000 Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PDCPOIID_00410 0.0 ptsI 2.7.3.9 - G ko:K08483 ko02060,map02060 ko00000,ko00001,ko01000,ko02000 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PDCPOIID_00411 1.02e-51 ptsH - - G ko:K11189 - ko00000,ko02000 phosphocarrier protein HPR
PDCPOIID_00412 9.5e-39 - - - - - - - -
PDCPOIID_00413 0.0 clpE - - O ko:K03697,ko:K04086 - ko00000,ko03110 Belongs to the ClpA ClpB family
PDCPOIID_00414 3.36e-61 XK27_09445 - - S - - - Domain of unknown function (DUF1827)
PDCPOIID_00415 6.99e-130 pinR1 - - L - - - Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
PDCPOIID_00416 1.75e-316 - 3.2.1.21, 3.2.1.85, 3.2.1.86 GT1 G ko:K01220,ko:K01223,ko:K05350 ko00010,ko00052,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00052,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PDCPOIID_00417 1.38e-123 - - - - - - - -
PDCPOIID_00418 3.28e-148 pinR1 - - L - - - Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
PDCPOIID_00419 2.22e-60 - - - L - - - BRCA1 C Terminus (BRCT) domain
PDCPOIID_00420 5.11e-93 yqeB - - S - - - Pyrimidine dimer DNA glycosylase
PDCPOIID_00421 2.37e-91 - - - S ko:K07006 - ko00000 Pyridoxamine 5'-phosphate oxidase
PDCPOIID_00422 0.0 - 4.2.1.53 - S ko:K10254 - ko00000,ko01000 Myosin-crossreactive antigen
PDCPOIID_00424 2.62e-88 - - - K - - - Bacterial regulatory proteins, tetR family
PDCPOIID_00425 9.18e-173 - - - M - - - Leucine rich repeats (6 copies)
PDCPOIID_00426 2.95e-264 yknZ - - V ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
PDCPOIID_00427 2.9e-160 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
PDCPOIID_00428 1.51e-238 hlyD3 - - M ko:K02005 - ko00000 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDCPOIID_00429 6.72e-19 - - - - - - - -
PDCPOIID_00430 5.93e-59 - - - - - - - -
PDCPOIID_00431 1.84e-190 - - - S - - - haloacid dehalogenase-like hydrolase
PDCPOIID_00432 2.09e-169 nagB 3.5.99.6 - G ko:K02564 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PDCPOIID_00433 0.0 mtlA 2.7.1.197 - G ko:K02799,ko:K02800 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
PDCPOIID_00434 0.0 mtlR - - K ko:K03483 - ko00000,ko03000 Mga helix-turn-helix domain
PDCPOIID_00435 9.2e-101 mtlF 2.7.1.197 - G ko:K02798 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDCPOIID_00436 1.68e-275 mtlD 1.1.1.17 - C ko:K00009 ko00051,map00051 ko00000,ko00001,ko01000 mannitol-1-phosphate 5-dehydrogenase activity
PDCPOIID_00437 2.16e-238 lipA - - I - - - Carboxylesterase family
PDCPOIID_00438 9.43e-233 - - - D ko:K06889 - ko00000 Alpha beta
PDCPOIID_00439 1.87e-217 prs2 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PDCPOIID_00441 9.88e-36 ytgB - - S - - - Transglycosylase associated protein
PDCPOIID_00442 1.89e-22 - - - - - - - -
PDCPOIID_00443 7.93e-60 - - - S - - - Phage gp6-like head-tail connector protein
PDCPOIID_00444 0.0 - - - S ko:K06904 - ko00000 Phage capsid family
PDCPOIID_00445 1.57e-278 - - - S - - - Phage portal protein
PDCPOIID_00446 4.99e-28 - - - - - - - -
PDCPOIID_00447 0.0 terL - - S - - - overlaps another CDS with the same product name
PDCPOIID_00448 2.22e-103 terS - - L - - - Phage terminase, small subunit
PDCPOIID_00449 1.5e-27 - - - L ko:K07451 - ko00000,ko01000,ko02048 COG1403 Restriction endonuclease
PDCPOIID_00451 7.97e-71 - - - S - - - Phage head-tail joining protein
PDCPOIID_00453 0.0 - - - S ko:K06919 - ko00000 DNA primase
PDCPOIID_00454 2.31e-196 - - - L - - - Bifunctional DNA primase/polymerase, N-terminal
PDCPOIID_00455 1.56e-34 - - - - - - - -
PDCPOIID_00457 8.86e-35 - - - - - - - -
PDCPOIID_00458 3.16e-25 - - - - - - - -
PDCPOIID_00459 2.05e-42 - - - - - - - -
PDCPOIID_00460 2.25e-59 - - - - - - - -
PDCPOIID_00461 2.57e-109 - - - K ko:K07729 - ko00000,ko03000 sequence-specific DNA binding
PDCPOIID_00462 6.15e-281 sip - - L - - - Belongs to the 'phage' integrase family
PDCPOIID_00466 3.5e-88 - - - V - - - Domain of unknown function (DUF3883)
PDCPOIID_00467 2.36e-217 - - - O - - - protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
PDCPOIID_00468 1.58e-284 yagE - - E - - - Amino acid permease
PDCPOIID_00469 6.42e-86 - - - - - - - -
PDCPOIID_00470 1.3e-115 M1-431 - - S - - - Protein of unknown function (DUF1706)
PDCPOIID_00471 1.56e-194 - - - I - - - NAD binding domain of 6-phosphogluconate dehydrogenase
PDCPOIID_00472 6.07e-155 malR - - KT ko:K02475,ko:K11615 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 cheY-homologous receiver domain
PDCPOIID_00473 0.0 dpiB 2.7.13.3 - T ko:K02476,ko:K11614 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Single cache domain 3
PDCPOIID_00474 5.39e-292 malP - - C ko:K11616 ko02020,map02020 ko00000,ko00001 2-hydroxycarboxylate transporter family
PDCPOIID_00475 3.65e-272 mae 1.1.1.38 - C ko:K00027 ko00620,ko01200,ko02020,map00620,map01200,map02020 ko00000,ko00001,ko01000 Malic enzyme, NAD binding domain
PDCPOIID_00476 1.49e-61 yjdF3 - - S - - - Protein of unknown function (DUF2992)
PDCPOIID_00477 8.26e-147 - - - S - - - Bacteriocin-protection, YdeI or OmpD-Associated
PDCPOIID_00478 0.0 aspA 4.3.1.1 - E ko:K01744 ko00250,ko01100,map00250,map01100 ko00000,ko00001,ko01000 Fumarase C C-terminus
PDCPOIID_00479 1.75e-185 - 3.1.3.102, 3.1.3.104, 3.1.3.23 - G ko:K07757,ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Sucrose-6F-phosphate phosphohydrolase
PDCPOIID_00480 1.34e-126 thgA3 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
PDCPOIID_00481 8.88e-272 - - - M - - - Glycosyl transferases group 1
PDCPOIID_00482 1.97e-262 yebA - - E - - - Transglutaminase/protease-like homologues
PDCPOIID_00483 9.09e-147 yebA - - E - - - Transglutaminase/protease-like homologues
PDCPOIID_00484 8.74e-235 - - - S - - - Protein of unknown function DUF58
PDCPOIID_00485 3.67e-182 - - - S ko:K03924 - ko00000,ko01000 ATPase family associated with various cellular activities (AAA)
PDCPOIID_00486 2.22e-137 - - - S ko:K06384 - ko00000 Stage II sporulation protein M
PDCPOIID_00487 1.75e-104 gntP - - EG ko:K03299 - ko00000,ko02000 Gluconate
PDCPOIID_00488 0.0 gntK 2.7.1.12 - G ko:K00851 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko01000 Belongs to the FGGY kinase family
PDCPOIID_00491 5.44e-174 - - - F - - - NUDIX domain
PDCPOIID_00492 1.09e-138 pncA - - Q - - - Isochorismatase family
PDCPOIID_00493 0.0 nadC2 6.3.4.21 - F ko:K00763 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PDCPOIID_00494 4.95e-269 ugpC 3.6.3.20 - E ko:K05816,ko:K10112 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Belongs to the ABC transporter superfamily
PDCPOIID_00495 6.76e-116 - - - P ko:K05814 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC-type sugar transport systems, permease components
PDCPOIID_00496 1.42e-270 - - - - - - - -
PDCPOIID_00497 1.5e-96 - - - - - - - -
PDCPOIID_00498 0.0 hsdR 3.1.21.3 - V ko:K01153 - ko00000,ko01000,ko02048 Subunit R is required for both nuclease and ATPase activities, but not for modification
PDCPOIID_00499 3.89e-252 hsdM 2.1.1.72 - V ko:K03427 - ko00000,ko01000,ko02048 type I restriction-modification system
PDCPOIID_00500 1.01e-121 hsdS 3.1.21.3 - V ko:K01154 - ko00000,ko01000,ko02048 type I restriction modification DNA specificity domain
PDCPOIID_00501 4.99e-223 - - - L - - - Belongs to the 'phage' integrase family
PDCPOIID_00502 1.98e-92 - 3.1.21.3 - V ko:K01154 - ko00000,ko01000,ko02048 PFAM restriction modification system DNA specificity domain
PDCPOIID_00503 2.74e-159 - - - - - - - -
PDCPOIID_00504 6.7e-315 xylP - - G - - - MFS/sugar transport protein
PDCPOIID_00506 3.07e-124 - - - - - - - -
PDCPOIID_00507 4.69e-299 - - - - - - - -
PDCPOIID_00508 9.86e-45 - - - - - - - -
PDCPOIID_00510 0.0 - - - L - - - Protein of unknown function (DUF3991)
PDCPOIID_00513 0.0 tex - - K ko:K06959 - ko00000 Tex-like protein N-terminal domain protein
PDCPOIID_00514 5.16e-89 - - - K - - - Cro/C1-type HTH DNA-binding domain
PDCPOIID_00515 3.07e-142 rpsD - - J ko:K02986 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PDCPOIID_00516 7.1e-111 yebR 1.8.4.14 - T ko:K08968 ko00270,map00270 ko00000,ko00001,ko01000 GAF domain-containing protein
PDCPOIID_00517 0.0 ezrA - - D ko:K06286 - ko00000,ko03036 modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PDCPOIID_00518 5.01e-271 iscS2 2.8.1.7 - E ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Aminotransferase class V
PDCPOIID_00519 4.95e-288 thiI 2.8.1.4 - H ko:K03151 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PDCPOIID_00520 1.24e-148 rex - - K ko:K01926 - ko00000,ko03000 Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PDCPOIID_00521 0.0 valS 6.1.1.9 - J ko:K01873 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PDCPOIID_00522 5.15e-307 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the folylpolyglutamate synthase family
PDCPOIID_00523 1.34e-146 - - - S - - - Haloacid dehalogenase-like hydrolase
PDCPOIID_00524 1.97e-152 radC - - L ko:K03630 - ko00000 DNA repair protein
PDCPOIID_00525 4.82e-229 mreB - - D ko:K03569 - ko00000,ko02048,ko03036,ko04812 cell shape determining protein MreB
PDCPOIID_00526 1.09e-190 mreC - - M ko:K03570 - ko00000,ko03036 Involved in formation and maintenance of cell shape
PDCPOIID_00527 1.01e-111 mreD - - M ko:K03571 - ko00000,ko03036 rod shape-determining protein MreD
PDCPOIID_00528 1.1e-147 minC - - D ko:K03610 - ko00000,ko03036,ko04812 Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
PDCPOIID_00529 8.63e-182 minD - - D ko:K03609 - ko00000,ko03036,ko04812 Belongs to the ParA family
PDCPOIID_00530 4.79e-142 yecS_2 - - P ko:K02029,ko:K02030 - ko00000,ko00002,ko02000 ABC transporter permease
PDCPOIID_00531 9.43e-146 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter
PDCPOIID_00532 2.32e-193 aatB - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein
PDCPOIID_00533 0.0 cls - - I ko:K06131 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PDCPOIID_00534 7.11e-60 - - - - - - - -
PDCPOIID_00535 1.61e-101 mraZ - - K ko:K03925 - ko00000 Belongs to the MraZ family
PDCPOIID_00536 6.77e-219 rsmH 2.1.1.199 - J ko:K03438 - ko00000,ko01000,ko03009 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PDCPOIID_00537 1.08e-66 ftsL - - D - - - cell division protein FtsL
PDCPOIID_00538 0.0 pbpX - - M ko:K08724,ko:K12552,ko:K12556 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011 Penicillin-binding Protein
PDCPOIID_00539 5.4e-230 mraY 2.7.8.13 - M ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PDCPOIID_00540 0.0 murD 6.3.2.9 - M ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PDCPOIID_00541 3.29e-258 murG 2.4.1.227 GT28 M ko:K02563 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PDCPOIID_00542 2.06e-200 divIB - - D ko:K03589 ko04112,map04112 ko00000,ko00001,ko03036 Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PDCPOIID_00543 5.87e-311 ftsA - - D ko:K03590 ko04112,map04112 ko00000,ko00001,ko03036,ko04812 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PDCPOIID_00544 6.55e-291 ftsZ - - D ko:K03531 ko04112,map04112 ko00000,ko00001,ko02048,ko03036,ko04812 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PDCPOIID_00545 2.95e-101 sepF - - D ko:K09772 - ko00000,ko03036 Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PDCPOIID_00546 5.58e-60 ylmG - - S ko:K02221 - ko00000,ko02044 integral membrane protein
PDCPOIID_00547 1.45e-186 ylmH - - S - - - S4 domain protein
PDCPOIID_00548 8.49e-120 divIVA - - D ko:K04074 - ko00000,ko03036 DivIVA protein
PDCPOIID_00549 0.0 ileS 6.1.1.5 - J ko:K01870 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PDCPOIID_00550 4.62e-48 cspB - - K ko:K03704 - ko00000,ko03000 Cold shock protein
PDCPOIID_00551 5.93e-207 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 Phosphate
PDCPOIID_00552 0.0 ydiC1 - - EGP - - - Major Facilitator
PDCPOIID_00553 1.03e-269 yaaN - - P - - - Toxic anion resistance protein (TelA)
PDCPOIID_00554 3.27e-150 - - - S - - - 5-bromo-4-chloroindolyl phosphate hydrolysis protein
PDCPOIID_00555 1.83e-124 nudF 3.6.1.13 - L ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 ADP-ribose pyrophosphatase
PDCPOIID_00556 2.45e-40 - - - - - - - -
PDCPOIID_00557 1.95e-159 mtnN 3.2.2.9 - E ko:K01243 ko00270,ko01100,ko01230,map00270,map01100,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PDCPOIID_00558 2.81e-278 iscS 2.8.1.7 - E ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Aminotransferase class V
PDCPOIID_00559 2.45e-75 XK27_04120 - - S - - - Putative amino acid metabolism
PDCPOIID_00560 0.0 uvrA2 - - L - - - ABC transporter
PDCPOIID_00561 8.81e-310 mnmA 2.8.1.13 - J ko:K00566 ko04122,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PDCPOIID_00562 3.85e-158 pgm6 - - G - - - phosphoglycerate mutase
PDCPOIID_00563 1.62e-151 - - - S - - - repeat protein
PDCPOIID_00564 0.0 recD2 3.1.11.5 - L ko:K03581 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PDCPOIID_00565 2.86e-312 - - - S - - - Sterol carrier protein domain
PDCPOIID_00566 1.34e-231 ytlR - - I - - - Diacylglycerol kinase catalytic domain
PDCPOIID_00567 0.0 rnjA - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PDCPOIID_00568 2.02e-43 ykzG - - S - - - Belongs to the UPF0356 family
PDCPOIID_00569 1.11e-95 - - - - - - - -
PDCPOIID_00570 6.4e-57 - - - - - - - -
PDCPOIID_00571 4.82e-132 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PDCPOIID_00572 5.13e-112 - - - S - - - E1-E2 ATPase
PDCPOIID_00573 1.42e-267 pdhA 1.2.4.1 - C ko:K00161 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 br01601,ko00000,ko00001,ko00002,ko01000 Dehydrogenase E1 component
PDCPOIID_00574 1.15e-232 pdhB 1.2.4.1 - C ko:K00162 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 br01601,ko00000,ko00001,ko00002,ko01000 Transketolase, C-terminal domain protein
PDCPOIID_00575 0.0 pdhC 2.3.1.12 - C ko:K00627 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PDCPOIID_00576 0.0 pdhD 1.8.1.4 - C ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 Dehydrogenase
PDCPOIID_00577 4.32e-202 - 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 L-malate dehydrogenase activity
PDCPOIID_00578 6.15e-62 yktA - - S - - - Belongs to the UPF0223 family
PDCPOIID_00579 3.56e-189 suhB 3.1.3.25 - G ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 ko00000,ko00001,ko00002,ko01000 Belongs to the inositol monophosphatase superfamily
PDCPOIID_00580 0.0 typA - - T ko:K06207 - ko00000 GTP-binding protein TypA
PDCPOIID_00581 1.66e-269 ftsW - - D ko:K03588 ko04112,map04112 ko00000,ko00001,ko02000,ko03036 Belongs to the SEDS family
PDCPOIID_00582 0.0 pyc 6.4.1.1 - C ko:K01958 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
PDCPOIID_00583 8.46e-84 ylbG - - S - - - Uncharacterized protein conserved in bacteria (DUF2129)
PDCPOIID_00584 9.93e-130 rsmD 2.1.1.171 - L ko:K08316 - ko00000,ko01000,ko03009 RNA methyltransferase, RsmD family
PDCPOIID_00585 4.38e-113 coaD 2.7.7.3 - H ko:K00954 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PDCPOIID_00586 1.82e-233 lon - - T ko:K07177 ko02024,map02024 ko00000,ko00001,ko01002 Belongs to the peptidase S16 family
PDCPOIID_00587 4.95e-146 comEA - - L ko:K02237 - ko00000,ko00002,ko02044 Competence protein ComEA
PDCPOIID_00588 1.06e-261 comEC - - S ko:K02238 - ko00000,ko00002,ko02044 Competence protein ComEC
PDCPOIID_00589 1.36e-242 comEC - - S ko:K02238 - ko00000,ko00002,ko02044 Competence protein ComEC
PDCPOIID_00590 5.08e-222 holA 2.7.7.7 - L ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III delta subunit
PDCPOIID_00591 1.44e-47 rpsT - - J ko:K02968 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 16S ribosomal RNA
PDCPOIID_00593 5e-57 rpsO - - J ko:K02956 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PDCPOIID_00594 5.41e-62 - - - - - - - -
PDCPOIID_00595 0.0 rnjB - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PDCPOIID_00596 5.54e-213 - - - S - - - Tetratricopeptide repeat
PDCPOIID_00597 4.73e-286 tuf - - J ko:K02358,ko:K15771 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PDCPOIID_00598 0.0 yknV - - V ko:K11085 ko02010,map02010 ko00000,ko00001,ko01000,ko02000 ABC transporter
PDCPOIID_00599 9.55e-288 tig - - D ko:K03545 - ko00000 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PDCPOIID_00600 1.19e-296 clpX - - O ko:K03544 ko04112,map04112 ko00000,ko00001,ko03110 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PDCPOIID_00601 2.74e-138 engB - - D ko:K03978 - ko00000,ko03036 Necessary for normal cell division and for the maintenance of normal septation
PDCPOIID_00602 2.28e-63 - - - S - - - mazG nucleotide pyrophosphohydrolase
PDCPOIID_00603 3.33e-28 - - - - - - - -
PDCPOIID_00604 0.0 glnPH2 - - P ko:K02029,ko:K02030 - ko00000,ko00002,ko02000 ABC transporter permease
PDCPOIID_00605 1.89e-172 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PDCPOIID_00606 0.0 uvrC - - L ko:K03703 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PDCPOIID_00607 0.0 fruA 2.7.1.202 - GT ko:K02768,ko:K02769,ko:K02770 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphotransferase System
PDCPOIID_00608 2.76e-218 pfkB 2.7.1.56 - H ko:K00882 ko00051,map00051 ko00000,ko00001,ko01000 Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PDCPOIID_00609 2.78e-170 fruR - - K ko:K03436 - ko00000,ko03000 DeoR C terminal sensor domain
PDCPOIID_00610 3.37e-309 obg - - S ko:K03979 - ko00000,ko01000,ko03009 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PDCPOIID_00611 0.0 oatA - - I - - - Acyltransferase
PDCPOIID_00612 2.71e-233 rnz 3.1.26.11 - J ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PDCPOIID_00613 1.83e-183 yqjQ - - S ko:K07124 - ko00000 Enoyl-(Acyl carrier protein) reductase
PDCPOIID_00614 8.28e-64 - - - S - - - Lipopolysaccharide assembly protein A domain
PDCPOIID_00615 0.0 ybfG - - M - - - peptidoglycan-binding domain-containing protein
PDCPOIID_00619 4.09e-131 yobS - - K - - - Bacterial regulatory proteins, tetR family
PDCPOIID_00620 4.57e-69 yiaC - - K ko:K03826 - ko00000,ko01000 Acetyltransferase (GNAT) domain
PDCPOIID_00621 2.67e-218 bgaC 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 Glycosyl hydrolases family 35
PDCPOIID_00622 1.3e-287 nagA 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Belongs to the metallo-dependent hydrolases superfamily. NagA family
PDCPOIID_00623 7.76e-279 agaS - - G ko:K02082 - ko00000,ko01000 SIS domain
PDCPOIID_00624 5.43e-167 - - - K ko:K03710 - ko00000,ko03000 UTRA
PDCPOIID_00625 8.75e-247 manA 5.3.1.8 - G ko:K01809 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 mannose-6-phosphate isomerase
PDCPOIID_00626 0.0 strH 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Gram-positive signal peptide protein, YSIRK family
PDCPOIID_00627 1.15e-185 ywqE 3.1.3.48 - GM ko:K01104 - ko00000,ko01000 PHP domain protein
PDCPOIID_00628 3.64e-195 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
PDCPOIID_00629 6.53e-193 - - - - - - - -
PDCPOIID_00630 3.74e-213 yhgE - - V ko:K01421 - ko00000 domain protein
PDCPOIID_00632 1.4e-315 gshR 1.8.1.7 - C ko:K00383 ko00480,ko04918,map00480,map04918 ko00000,ko00001,ko01000 Glutathione reductase
PDCPOIID_00633 3.51e-224 proV - - E ko:K05847 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, ATP-binding protein
PDCPOIID_00634 0.0 choS - - EM ko:K05845,ko:K05846 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PDCPOIID_00635 1.02e-201 glf 5.4.99.9 - M ko:K01854 ko00052,ko00520,map00052,map00520 ko00000,ko00001,ko01000 UDP-galactopyranose mutase
PDCPOIID_00636 2.84e-89 - - - - - - - -
PDCPOIID_00637 2.83e-92 - - - M - - - Glycosyl transferases group 1
PDCPOIID_00639 0.0 rpoC 2.7.7.6 - K ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDCPOIID_00640 0.0 rpoB 2.7.7.6 - K ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDCPOIID_00641 0.0 clpC - - O ko:K03696 ko01100,map01100 ko00000,ko03110 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PDCPOIID_00642 4.32e-105 ctsR - - K ko:K03708 - ko00000,ko03000 Belongs to the CtsR family
PDCPOIID_00652 2.25e-07 - - - V ko:K01990 - ko00000,ko00002,ko02000 abc transporter atp-binding protein
PDCPOIID_00654 3.27e-63 - - - F ko:K15051 - ko00000 DNA/RNA non-specific endonuclease
PDCPOIID_00657 3.17e-166 - - - - - - - -
PDCPOIID_00658 0.0 cps2E - - M - - - Bacterial sugar transferase
PDCPOIID_00659 9.34e-225 cps2D 5.1.3.2, 5.1.3.25 - M ko:K01784,ko:K17947 ko00052,ko00520,ko00523,ko01100,ko01130,map00052,map00520,map00523,map01100,map01130 ko00000,ko00001,ko00002,ko01000 RmlD substrate binding domain
PDCPOIID_00660 6.51e-141 glnP - - P ko:K10040 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PDCPOIID_00661 1.44e-141 glnM - - P ko:K10040 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PDCPOIID_00662 2.05e-189 glnH - - ET ko:K10039 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
PDCPOIID_00663 2.59e-173 glnQ - - E ko:K10041 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PDCPOIID_00664 3.13e-227 - - - - - - - -
PDCPOIID_00666 3.91e-109 zur - - P ko:K02076,ko:K03711 - ko00000,ko03000 Belongs to the Fur family
PDCPOIID_00667 1.56e-13 - - - - - - - -
PDCPOIID_00668 2.09e-143 gmk2 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Guanylate kinase
PDCPOIID_00669 5.75e-89 - - - K - - - Acetyltransferase (GNAT) domain
PDCPOIID_00670 1.03e-187 spl - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC/P60 family
PDCPOIID_00671 1.55e-312 tyrS 6.1.1.1 - J ko:K01866 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PDCPOIID_00672 1.32e-221 yeaB - - P - - - Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PDCPOIID_00673 5.83e-73 - - - K - - - helix_turn_helix, Arsenical Resistance Operon Repressor
PDCPOIID_00674 3.12e-222 apbE 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PDCPOIID_00675 0.0 malZ 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31 G ko:K01187,ko:K01200 ko00052,ko00500,ko01100,ko01110,map00052,map00500,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 13 family
PDCPOIID_00676 0.0 glgP 2.4.1.1 GT35 G ko:K00688 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 ko00000,ko00001,ko01000 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PDCPOIID_00677 0.0 glgA 2.4.1.21 GT5 F ko:K00703 ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026 ko00000,ko00001,ko00002,ko01000,ko01003 Synthesizes alpha-1,4-glucan chains using ADP-glucose
PDCPOIID_00678 2.31e-278 glgD 2.7.7.27 - G ko:K00975 ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026 ko00000,ko00001,ko00002,ko01000 Nucleotidyl transferase
PDCPOIID_00679 1.18e-255 glgC 2.7.7.27 - H ko:K00975 ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PDCPOIID_00680 0.0 glgB 2.4.1.18 CBM48,GH13 G ko:K00700 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PDCPOIID_00681 8.73e-262 ilvE 2.6.1.42 - E ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Branched-chain amino acid aminotransferase
PDCPOIID_00682 4.75e-134 - - - M - - - Sortase family
PDCPOIID_00683 5.24e-186 - - - S - - - Uncharacterised 5xTM membrane BCR, YitT family COG1284
PDCPOIID_00684 0.0 fbp 3.1.3.11 - G ko:K04041 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 phosphatase activity
PDCPOIID_00685 1.94e-86 spx2 - - P ko:K16509 - ko00000 ArsC family
PDCPOIID_00686 0.0 clpE - - O ko:K03697,ko:K04086 - ko00000,ko03110 associated with various cellular activities
PDCPOIID_00687 3.52e-56 rfbD 1.1.1.133 - M ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PDCPOIID_00688 6.62e-231 - - - M - - - Glycosyl hydrolases family 25
PDCPOIID_00689 3.12e-273 mccB 4.4.1.1, 4.4.1.2, 4.4.1.8 - E ko:K01760,ko:K17217 ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 cystathionine
PDCPOIID_00690 6.84e-186 tcyA - - ET ko:K02424 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko02035 Belongs to the bacterial solute-binding protein 3 family
PDCPOIID_00691 2.87e-157 tcyB - - E ko:K10009 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PDCPOIID_00692 8.16e-43 - - - - - - - -
PDCPOIID_00693 0.0 brnQ - - U ko:K03311 - ko00000 Component of the transport system for branched-chain amino acids
PDCPOIID_00694 1.14e-151 - - - S - - - WxL domain surface cell wall-binding
PDCPOIID_00695 5.08e-179 - - - S - - - Cell surface protein
PDCPOIID_00696 5.11e-58 - - - - - - - -
PDCPOIID_00697 1.08e-248 - - - S - - - Leucine-rich repeat (LRR) protein
PDCPOIID_00698 2.64e-151 - - - S - - - WxL domain surface cell wall-binding
PDCPOIID_00699 2.68e-75 - - - - - - - -
PDCPOIID_00700 2.02e-137 - - - N - - - WxL domain surface cell wall-binding
PDCPOIID_00701 0.0 - - - S - - - Leucine-rich repeat (LRR) protein
PDCPOIID_00702 5.7e-224 yicL - - EG - - - EamA-like transporter family
PDCPOIID_00703 0.0 - - - - - - - -
PDCPOIID_00704 3.03e-186 CcmA5 - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
PDCPOIID_00705 1.31e-67 - - - S - - - ECF-type riboflavin transporter, S component
PDCPOIID_00706 5.45e-31 - - - S - - - ECF-type riboflavin transporter, S component
PDCPOIID_00707 1.83e-192 pdxK 2.7.1.35 - H ko:K00868 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko01000 Phosphomethylpyrimidine kinase
PDCPOIID_00708 7.88e-211 metF 1.5.1.20 - C ko:K00297 ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523 ko00000,ko00001,ko00002,ko01000 Methylenetetrahydrofolate reductase
PDCPOIID_00709 0.0 metE 2.1.1.14 - E ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PDCPOIID_00710 0.0 XK27_09600 - - V ko:K06147,ko:K18891 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, ATP-binding protein
PDCPOIID_00711 0.0 - - - V ko:K06147,ko:K18892 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PDCPOIID_00712 2.25e-284 oxlT - - P ko:K08177 - ko00000,ko02000 Major Facilitator Superfamily
PDCPOIID_00713 5.43e-167 treR - - K ko:K03486 - ko00000,ko03000 UTRA
PDCPOIID_00714 0.0 treC 3.2.1.93 GH13 G ko:K01226 ko00500,map00500 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain protein
PDCPOIID_00715 0.0 treB - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
PDCPOIID_00716 5.05e-282 sstT - - U ko:K07862 - ko00000,ko02000 Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
PDCPOIID_00717 0.0 - - - E ko:K03294 - ko00000 Amino Acid
PDCPOIID_00718 1.13e-221 ldh 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 lactate/malate dehydrogenase, alpha/beta C-terminal domain
PDCPOIID_00719 0.0 gdhA 1.4.1.4 - E ko:K00262 ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100 ko00000,ko00001,ko01000 Belongs to the Glu Leu Phe Val dehydrogenases family
PDCPOIID_00720 3.08e-43 cspA - - K ko:K03704 - ko00000,ko03000 'Cold-shock' DNA-binding domain
PDCPOIID_00721 2.1e-89 - - - - - - - -
PDCPOIID_00722 1.37e-99 - - - O - - - OsmC-like protein
PDCPOIID_00723 0.0 yjcA - - S ko:K19350 ko02010,map02010 ko00000,ko00001,ko01504,ko02000 ABC transporter
PDCPOIID_00724 2.73e-147 ylbE - - GM - - - NAD(P)H-binding
PDCPOIID_00725 9.12e-201 - - - S - - - Aldo/keto reductase family
PDCPOIID_00726 9.04e-317 yifK - - E ko:K03293 - ko00000 Amino acid permease
PDCPOIID_00727 0.0 - - - S - - - Protein of unknown function (DUF3800)
PDCPOIID_00728 4.43e-146 nhaK - - P ko:K03316 - ko00000 Sodium proton antiporter
PDCPOIID_00729 4.51e-269 nhaK - - P ko:K03316 - ko00000 Sodium proton antiporter
PDCPOIID_00730 5.49e-78 - - - S - - - Protein of unknown function (DUF3021)
PDCPOIID_00731 1.2e-95 - - - K - - - LytTr DNA-binding domain
PDCPOIID_00732 1.21e-188 - - - V ko:K11051 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC-2 type transporter
PDCPOIID_00733 1.12e-209 - - - V ko:K01990,ko:K11050 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PDCPOIID_00734 2.06e-40 - - - - - - - -
PDCPOIID_00735 4.06e-98 is18 - - L - - - Integrase core domain
PDCPOIID_00736 1.4e-58 - - - L ko:K07483 - ko00000 Homeodomain-like domain
PDCPOIID_00737 1.64e-283 dhaT 1.1.1.202 - C ko:K00086 ko00561,ko00640,map00561,map00640 ko00000,ko00001,ko01000 Dehydrogenase
PDCPOIID_00738 0.0 glvC 2.7.1.208 - G ko:K02749,ko:K02750 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system, EIIB
PDCPOIID_00739 2.34e-287 - 3.2.1.122, 3.2.1.86 GH4,GT4 G ko:K01222,ko:K01232 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Family 4 glycosyl hydrolase C-terminal domain
PDCPOIID_00740 5.84e-64 - - - K - - - Helix-turn-helix domain, rpiR family
PDCPOIID_00743 2.76e-104 - - - - - - - -
PDCPOIID_00746 1.23e-171 - - - - - - - -
PDCPOIID_00747 5.45e-94 - - - - - - - -
PDCPOIID_00749 9.85e-197 pi346 - - L ko:K02315 - ko00000,ko03032 IstB-like ATP binding protein
PDCPOIID_00750 4.49e-180 - - - L - - - Helix-turn-helix domain
PDCPOIID_00756 1.66e-59 - - - S - - - Domain of unknown function (DUF1883)
PDCPOIID_00758 2.23e-179 - - - S - - - ORF6N domain
PDCPOIID_00759 4.03e-202 ps305 - - S - - - Protein of unknown function (Hypoth_ymh)
PDCPOIID_00762 1.51e-80 - - - K - - - Helix-turn-helix XRE-family like proteins
PDCPOIID_00763 9.43e-171 - - - - - - - -
PDCPOIID_00768 5.52e-286 int3 - - L - - - Belongs to the 'phage' integrase family
PDCPOIID_00770 2.14e-24 - - - - - - - -
PDCPOIID_00771 2.2e-222 cysK 2.5.1.47 - E ko:K01738 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the cysteine synthase cystathionine beta- synthase family
PDCPOIID_00772 6.47e-205 metA 2.3.1.46 - E ko:K00651 ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Transfers an acetyl group from acetyl-CoA to
PDCPOIID_00773 2.98e-215 aroE 1.1.1.25 - E ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PDCPOIID_00774 1.06e-27 - - - EGP - - - Major Facilitator Superfamily
PDCPOIID_00775 4.87e-219 - - - EGP - - - Major Facilitator Superfamily
PDCPOIID_00776 8.84e-211 aroE 1.1.1.25 - E ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PDCPOIID_00777 1.26e-180 - 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Enoyl-(Acyl carrier protein) reductase
PDCPOIID_00778 4.46e-204 - - - G - - - Xylose isomerase-like TIM barrel
PDCPOIID_00779 3.89e-210 - - - K - - - Transcriptional regulator, LysR family
PDCPOIID_00780 1.66e-117 - - - S ko:K08996 - ko00000 Protein of unknown function (DUF1440)
PDCPOIID_00781 0.0 ycaM - - E - - - amino acid
PDCPOIID_00782 0.0 pepN 3.4.11.2 - E ko:K01256 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 aminopeptidase
PDCPOIID_00783 0.0 prtP 3.4.21.96 - O ko:K01361 - ko00000,ko01000,ko01002,ko03110 Belongs to the peptidase S8 family
PDCPOIID_00784 1.19e-234 - - - M - - - Peptidase_C39 like family
PDCPOIID_00785 2.01e-55 rfbD 1.1.1.133 - M ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PDCPOIID_00788 1.62e-12 - - - - - - - -
PDCPOIID_00790 4.47e-05 - - - T - - - diguanylate cyclase activity
PDCPOIID_00792 1.12e-67 - - - - - - - -
PDCPOIID_00793 1.88e-305 mntH - - P ko:K03322 - ko00000,ko02000 H( )-stimulated, divalent metal cation uptake system
PDCPOIID_00794 3.84e-145 - - - K - - - Bacterial regulatory proteins, tetR family
PDCPOIID_00795 8.19e-212 - - - P - - - CorA-like Mg2+ transporter protein
PDCPOIID_00796 8.56e-49 - - - S - - - Protein of unknown function (DUF1211)
PDCPOIID_00797 8.28e-48 - - - S - - - Protein of unknown function (DUF1722)
PDCPOIID_00798 6.92e-242 ysdE - - P - - - Citrate transporter
PDCPOIID_00800 5.14e-22 ytgB - - S - - - Transglycosylase associated protein
PDCPOIID_00801 7.3e-44 - - - V - - - ABC transporter transmembrane region
PDCPOIID_00802 1.45e-46 - - - - - - - -
PDCPOIID_00803 4.23e-94 - - - T - - - Calcineurin-like phosphoesterase superfamily domain
PDCPOIID_00804 0.0 - - - - - - - -
PDCPOIID_00805 1.75e-127 - - - K - - - Bacteriophage CI repressor helix-turn-helix domain
PDCPOIID_00807 0.0 nrdD 1.1.98.6 - F ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Ribonucleoside-triphosphate reductase
PDCPOIID_00808 3.78e-170 - - - S ko:K01992 - ko00000,ko00002,ko02000 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
PDCPOIID_00809 1.71e-212 yxlF - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
PDCPOIID_00810 1.91e-46 - - - S - - - Phospholipase_D-nuclease N-terminal
PDCPOIID_00811 1.84e-260 - - - K - - - Helix-turn-helix XRE-family like proteins
PDCPOIID_00812 2.83e-205 lysR5 - - K - - - LysR substrate binding domain
PDCPOIID_00813 0.0 - 3.6.3.6 - P ko:K01535 ko00190,map00190 ko00000,ko00001,ko01000 Cation transporter/ATPase, N-terminus
PDCPOIID_00814 4.34e-75 cadC5 - - K ko:K21903 - ko00000,ko03000 helix_turn_helix, Arsenical Resistance Operon Repressor
PDCPOIID_00815 0.0 cadA 3.6.3.3, 3.6.3.5 - P ko:K01534 - ko00000,ko01000 P-type ATPase
PDCPOIID_00816 9.64e-317 purA 6.3.4.4 - F ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PDCPOIID_00817 1.42e-153 yleF - - K - - - Helix-turn-helix domain, rpiR family
PDCPOIID_00818 2.88e-165 murQ 4.2.1.126 - G ko:K07106 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PDCPOIID_00819 0.0 pts32BC 2.7.1.211 - G ko:K02808,ko:K02809,ko:K02810 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
PDCPOIID_00820 3.14e-275 - - - - - - - -
PDCPOIID_00821 0.0 dnaB 3.6.4.12 - L ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Participates in initiation and elongation during chromosome replication
PDCPOIID_00822 1.35e-97 rplI - - J ko:K02939 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
PDCPOIID_00823 0.0 yybT - - T - - - signaling protein consisting of a modified GGDEF domain and a DHH domain
PDCPOIID_00824 5.51e-127 - - - V ko:K01990 - ko00000,ko00002,ko02000 AAA domain, putative AbiEii toxin, Type IV TA system
PDCPOIID_00825 1.5e-75 - - - P - - - ABC-2 family transporter protein
PDCPOIID_00827 2.03e-73 - - - V ko:K01992 - ko00000,ko00002,ko02000 ABC-2 type transporter
PDCPOIID_00828 1.13e-87 - - - K - - - Tetracyclin repressor, C-terminal all-alpha domain
PDCPOIID_00830 6.49e-123 - - - S - - - Phospholipase A2
PDCPOIID_00831 9.82e-133 cps1C - - S ko:K03328 - ko00000 Membrane protein involved in the export of O-antigen and teichoic acid
PDCPOIID_00833 3.04e-33 - - GT2 S ko:K12997 - ko00000,ko01000,ko01003,ko01005 involved in cell wall biogenesis
PDCPOIID_00835 2.5e-67 - - - F ko:K15051 - ko00000 DNA/RNA non-specific endonuclease
PDCPOIID_00836 4.28e-116 - - - D - - - Relaxase/Mobilisation nuclease domain
PDCPOIID_00837 3.74e-20 mobC - - S - - - Bacterial mobilisation protein (MobC)
PDCPOIID_00838 4.78e-95 - - - - - - - -
PDCPOIID_00839 8.27e-197 XK27_08835 - - S ko:K01989 - ko00000,ko00002,ko02000 ABC transporter
PDCPOIID_00840 2.83e-188 XK27_08840 - - U ko:K05832 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
PDCPOIID_00841 6.77e-167 XK27_08845 - - S ko:K05833 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PDCPOIID_00842 1.65e-111 ydcK - - S ko:K03095 - ko00000 Belongs to the SprT family
PDCPOIID_00843 1.4e-105 - - - K - - - Acetyltransferase GNAT Family
PDCPOIID_00844 3.64e-123 ydaF - - J ko:K03817 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
PDCPOIID_00845 0.0 glnP - - P ko:K02029,ko:K02030,ko:K10036 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PDCPOIID_00846 0.0 glnP - - P ko:K02029,ko:K02030,ko:K10036 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PDCPOIID_00847 1.09e-170 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PDCPOIID_00848 1.79e-211 - - - G - - - Phosphotransferase enzyme family
PDCPOIID_00849 7.76e-186 - - - S - - - AAA ATPase domain
PDCPOIID_00850 0.0 ydbT - - S ko:K08981 - ko00000 Bacterial PH domain
PDCPOIID_00851 8.68e-106 ydbS - - S ko:K09167 - ko00000 Bacterial PH domain
PDCPOIID_00852 1.4e-69 - - - - - - - -
PDCPOIID_00853 5.96e-53 - - - S - - - Iron-sulphur cluster biosynthesis
PDCPOIID_00854 1.33e-166 - - - S - - - Protein of unknown function (DUF975)
PDCPOIID_00855 1.21e-304 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
PDCPOIID_00856 4.51e-41 - - - - - - - -
PDCPOIID_00857 3.84e-65 - - - S ko:K07118 - ko00000 NAD(P)H-binding
PDCPOIID_00858 0.0 bglB 3.2.1.21, 3.2.1.52 GH3 G ko:K01207,ko:K05349 ko00460,ko00500,ko00520,ko00531,ko00940,ko01100,ko01110,ko01501,map00460,map00500,map00520,map00531,map00940,map01100,map01110,map01501 ko00000,ko00001,ko00002,ko01000 hydrolase, family 3
PDCPOIID_00859 3.73e-214 XK27_00670 - - S ko:K01989,ko:K05832 - ko00000,ko00002,ko02000 ABC transporter substrate binding protein
PDCPOIID_00860 2.07e-213 XK27_00670 - - S ko:K01989,ko:K05832 - ko00000,ko00002,ko02000 ABC transporter
PDCPOIID_00861 2.28e-206 WQ51_06230 - - U ko:K05832 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
PDCPOIID_00862 3.37e-180 - - - S ko:K05833 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PDCPOIID_00863 1.43e-223 - 1.1.1.1 - C ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 Zinc-binding dehydrogenase
PDCPOIID_00864 0.0 pacL3 3.6.3.8 - P ko:K01537 - ko00000,ko01000 Cation transporter/ATPase, N-terminus
PDCPOIID_00865 8.07e-233 ykcC - GT2 M ko:K20534 - ko00000,ko01000,ko01005,ko02000 Glycosyl transferase family 2
PDCPOIID_00866 0.0 ykcB - - M - - - Dolichyl-phosphate-mannose-protein mannosyltransferase
PDCPOIID_00867 3.08e-93 - - - S - - - GtrA-like protein
PDCPOIID_00868 3.91e-159 ciaR - - K ko:K14983 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko02022 cheY-homologous receiver domain
PDCPOIID_00869 8.6e-309 ciaH 2.7.13.3 - T ko:K14982 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 His Kinase A (phosphoacceptor) domain
PDCPOIID_00870 2.42e-88 - - - S - - - Belongs to the HesB IscA family
PDCPOIID_00871 0.0 - - - QT - - - PucR C-terminal helix-turn-helix domain
PDCPOIID_00872 1.12e-208 - - - S - - - KR domain
PDCPOIID_00873 1.41e-204 adc 4.1.1.4 - Q ko:K01574 ko00072,ko00640,ko01100,map00072,map00640,map01100 ko00000,ko00001,ko00002,ko01000 Acetoacetate decarboxylase (ADC)
PDCPOIID_00874 2.41e-156 ydgI - - C - - - Nitroreductase family
PDCPOIID_00875 1.24e-260 lldD 1.13.12.4 - C ko:K00467 ko00620,map00620 ko00000,ko00001,ko01000 IMP dehydrogenase / GMP reductase domain
PDCPOIID_00878 6.22e-243 - - - K - - - DNA-binding helix-turn-helix protein
PDCPOIID_00879 1.17e-77 - - - K ko:K10947 - ko00000,ko03000 Transcriptional regulator PadR-like family
PDCPOIID_00880 2.7e-62 ygbF - - S - - - Sugar efflux transporter for intercellular exchange
PDCPOIID_00881 4.91e-55 - - - - - - - -
PDCPOIID_00882 2.02e-245 - 1.1.1.1, 1.6.5.5 - C ko:K00001,ko:K00344 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
PDCPOIID_00884 1.32e-71 - - - - - - - -
PDCPOIID_00885 1.03e-103 - - - - - - - -
PDCPOIID_00886 5.77e-267 XK27_05220 - - S - - - AI-2E family transporter
PDCPOIID_00887 1.58e-33 - - - - - - - -
PDCPOIID_00888 2.83e-145 lexA 3.4.21.88 - K ko:K01356 - ko00000,ko00002,ko01000,ko01002,ko03400 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PDCPOIID_00889 3.6e-59 - - - - - - - -
PDCPOIID_00890 8.47e-214 mleP2 - - S ko:K07088 - ko00000 Transporter, auxin efflux carrier (AEC) family protein
PDCPOIID_00891 8.37e-116 - - - S - - - Flavin reductase like domain
PDCPOIID_00892 6.83e-91 - - - - - - - -
PDCPOIID_00893 3.12e-129 fthC 6.3.3.2 - H ko:K01934 ko00670,ko01100,map00670,map01100 ko00000,ko00001,ko01000 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PDCPOIID_00894 1.7e-81 yeaO - - S - - - Protein of unknown function, DUF488
PDCPOIID_00895 2.2e-223 - - - P ko:K03284 - ko00000,ko02000 CorA-like Mg2+ transporter protein
PDCPOIID_00896 4.86e-201 mleR - - K - - - LysR family
PDCPOIID_00897 0.0 mleS 1.1.1.38, 4.1.1.101 - C ko:K00027,ko:K22212 ko00620,ko01120,ko01200,ko02020,map00620,map01120,map01200,map02020 ko00000,ko00001,ko01000 Malic enzyme
PDCPOIID_00898 3.58e-217 mleP - - S ko:K07088 - ko00000 Sodium Bile acid symporter family
PDCPOIID_00899 8.23e-117 tpx 1.11.1.15 - O ko:K11065 - ko00000,ko01000 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PDCPOIID_00900 2.28e-113 - - - C - - - FMN binding
PDCPOIID_00901 7.65e-223 - - - K ko:K20373,ko:K20374 ko02024,map02024 ko00000,ko00001,ko03000 Helix-turn-helix XRE-family like proteins
PDCPOIID_00902 2.95e-10 - - - V - - - ABC transporter transmembrane region
PDCPOIID_00903 0.0 - - - V - - - ABC transporter transmembrane region
PDCPOIID_00904 0.0 pepF - - E - - - Oligopeptidase F
PDCPOIID_00905 3.86e-78 - - - - - - - -
PDCPOIID_00906 4.26e-276 ybeC - - E - - - amino acid
PDCPOIID_00908 1.09e-294 pimB 2.4.1.337 GT4 M ko:K19002 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000,ko01003 Glycosyltransferase, group 1 family protein
PDCPOIID_00909 4.62e-252 cpoA 2.4.1.208 GT4 M ko:K13677,ko:K13678 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000,ko01003 Glycosyltransferase, group 1 family protein
PDCPOIID_00910 1.58e-220 mprF - - I ko:K07027 - ko00000,ko02000 Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PDCPOIID_00912 8.08e-280 araT - - E ko:K00841 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
PDCPOIID_00913 1.52e-57 ykuJ - - S - - - Protein of unknown function (DUF1797)
PDCPOIID_00914 0.0 ltaS 2.7.8.20 - M ko:K19005 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PDCPOIID_00915 8.92e-105 perR - - P ko:K03711,ko:K09825 - ko00000,ko03000 Belongs to the Fur family
PDCPOIID_00916 3.81e-172 glnQ - - E ko:K17076 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PDCPOIID_00917 0.0 XK27_05795 - - P ko:K17073,ko:K17074 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PDCPOIID_00919 3.06e-204 ywdE - - K ko:K20375 ko02024,map02024 ko00000,ko00001,ko03000 Helix-turn-helix XRE-family like proteins
PDCPOIID_00920 8.33e-193 - - - K - - - Helix-turn-helix XRE-family like proteins
PDCPOIID_00921 5.98e-242 - - - K ko:K20373 ko02024,map02024 ko00000,ko00001,ko03000 Helix-turn-helix XRE-family like proteins
PDCPOIID_00922 9.77e-279 - - - EGP - - - Major facilitator Superfamily
PDCPOIID_00923 1.44e-230 manL 2.7.1.191, 2.7.1.202 - G ko:K02769,ko:K02793,ko:K02794 ko00051,ko00520,ko01100,ko01120,ko02060,map00051,map00520,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system sorbose subfamily IIB component
PDCPOIID_00924 1.57e-171 manM - - G ko:K02746,ko:K02795,ko:K02814 ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system
PDCPOIID_00925 1.73e-216 manN - - G ko:K02796,ko:K02815 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 system, mannose fructose sorbose family IID component
PDCPOIID_00926 1.08e-84 manO - - S - - - Domain of unknown function (DUF956)
PDCPOIID_00927 4.25e-220 iolS - - C ko:K06607 - ko00000,ko01000 Aldo keto reductase
PDCPOIID_00928 5.62e-274 yycB - - P ko:K03449 - ko00000,ko02000 Transporter, major facilitator family protein
PDCPOIID_00929 0.0 - - - EGP - - - Major Facilitator Superfamily
PDCPOIID_00930 3.32e-148 ycaC - - Q - - - Isochorismatase family
PDCPOIID_00931 3.71e-117 - - - S - - - AAA domain
PDCPOIID_00932 1.84e-110 - - - F - - - NUDIX domain
PDCPOIID_00933 8.68e-139 yokL3 - - J - - - Acetyltransferase (GNAT) domain
PDCPOIID_00934 3.41e-71 celC 2.7.1.196, 2.7.1.205 - G ko:K02759 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose Cellobiose specific IIA subunit
PDCPOIID_00935 3.39e-67 pts20B 2.7.1.196, 2.7.1.205 - G ko:K02760 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
PDCPOIID_00936 1.97e-168 gntR - - K ko:K03489 - ko00000,ko03000 UTRA
PDCPOIID_00937 1.76e-298 chbC - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDCPOIID_00938 9.09e-97 - - - S - - - Domain of unknown function (DUF3284)
PDCPOIID_00939 5.58e-272 ybhE - - S ko:K09963 - ko00000 Bacterial protein of unknown function (DUF871)
PDCPOIID_00940 0.0 argH 4.3.2.1 - E ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 argininosuccinate lyase
PDCPOIID_00941 1.63e-298 argG 6.3.4.5 - E ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the argininosuccinate synthase family. Type 1 subfamily
PDCPOIID_00942 0.0 arpJ - - P ko:K02029,ko:K02030 - ko00000,ko00002,ko02000 ABC transporter permease
PDCPOIID_00943 5.03e-156 - 1.11.1.10 - S ko:K00433 - ko00000,ko01000 Alpha/beta hydrolase family
PDCPOIID_00944 3.03e-168 yycF - - K ko:K07668 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 response regulator
PDCPOIID_00945 0.0 vicK 2.7.13.3 - T ko:K07652 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
PDCPOIID_00946 0.0 yycH - - S - - - YycH protein
PDCPOIID_00947 1.05e-182 yycI - - S - - - YycH protein
PDCPOIID_00948 1.24e-195 vicX 3.1.26.11 - S ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 domain protein
PDCPOIID_00949 1.14e-282 htrA 3.4.21.107 - O ko:K04771 ko01503,ko02020,map01503,map02020 ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 serine protease
PDCPOIID_00950 2.35e-92 - - - S - - - Iron-sulphur cluster biosynthesis
PDCPOIID_00951 1.8e-99 hsp3 - - O ko:K13993 ko04141,map04141 ko00000,ko00001,ko03110 Belongs to the small heat shock protein (HSP20) family
PDCPOIID_00952 0.0 cadA - - P - - - P-type ATPase
PDCPOIID_00953 1.43e-133 - - - - - - - -
PDCPOIID_00954 3.03e-58 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PDCPOIID_00955 2.94e-249 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PDCPOIID_00956 0.0 dapE 3.5.1.18 - E ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Peptidase dimerisation domain
PDCPOIID_00957 1.23e-90 - - - - - - - -
PDCPOIID_00958 2.77e-224 ysdE - - P - - - Citrate transporter
PDCPOIID_00959 2.76e-13 ysdE - - P - - - Citrate transporter
PDCPOIID_00960 1.01e-105 rlmH 2.1.1.177 - J ko:K00783 - ko00000,ko01000,ko03009 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PDCPOIID_00961 1.34e-98 - - - K ko:K03830 - ko00000,ko01000 Acetyltransferase (GNAT) domain
PDCPOIID_00962 2.16e-105 yiaC - - K ko:K03826 - ko00000,ko01000 Acetyltransferase (GNAT) domain
PDCPOIID_00963 3.86e-119 - - - K - - - Acetyltransferase (GNAT) domain
PDCPOIID_00964 7.72e-178 ptp1 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
PDCPOIID_00965 5.29e-239 - 1.1.1.1 - C ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 nadph quinone reductase
PDCPOIID_00966 2.42e-122 - - - E - - - HAD-hyrolase-like
PDCPOIID_00967 3.92e-120 yfbM - - K - - - FR47-like protein
PDCPOIID_00968 1.5e-171 - - - S - - - -acetyltransferase
PDCPOIID_00969 2.16e-68 sugE - - U ko:K11741 - ko00000,ko02000 Multidrug resistance protein
PDCPOIID_00970 5.32e-145 - - - Q - - - Methyltransferase
PDCPOIID_00971 5.14e-217 nrnA 3.1.13.3, 3.1.3.7 - S ko:K06881 ko00920,ko01100,ko01120,map00920,map01100,map01120 ko00000,ko00001,ko01000,ko03400 DHHA1 domain protein
PDCPOIID_00972 7.23e-200 - - - L ko:K07497 - ko00000 4.5 Transposon and IS
PDCPOIID_00973 8.71e-59 - - - L ko:K07483 - ko00000 4.5 Transposon and IS
PDCPOIID_00974 1.66e-42 yaaA - - S ko:K14761 - ko00000,ko03009 S4 domain protein YaaA
PDCPOIID_00975 9.09e-260 recF - - L ko:K03629 ko03440,map03440 ko00000,ko00001,ko03400 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PDCPOIID_00976 0.0 gyrB 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDCPOIID_00977 0.0 gyrA 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDCPOIID_00978 5.22e-163 deoC 4.1.2.4 - F ko:K01619 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PDCPOIID_00979 1.23e-96 ssb - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PDCPOIID_00980 1.36e-65 rpsF - - J ko:K02990 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Binds together with S18 to 16S ribosomal RNA
PDCPOIID_00981 1.54e-114 ssb - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PDCPOIID_00982 3.26e-48 rpsR - - J ko:K02963 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PDCPOIID_00983 1.87e-114 sip - - L - - - Phage integrase family
PDCPOIID_00984 2.58e-113 sip - - L - - - Phage integrase family
PDCPOIID_00987 4.4e-15 pfoS/R - - S ko:K07035 - ko00000 Phosphotransferase system, EIIC
PDCPOIID_00988 2.13e-227 panE 1.1.1.169 - H ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PDCPOIID_00989 7.77e-282 bfmBB 2.3.1.12, 2.3.1.168 - C ko:K00627,ko:K09699 ko00010,ko00020,ko00280,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00280,map00620,map00640,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
PDCPOIID_00990 3.05e-234 bfmBAB 1.2.4.4 - C ko:K00167,ko:K21417 ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130 br01601,ko00000,ko00001,ko00002,ko01000 Transketolase, pyrimidine binding domain
PDCPOIID_00991 1.52e-237 bfmBAA 1.2.4.4 - C ko:K00166 ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130 br01601,ko00000,ko00001,ko00002,ko01000 Dehydrogenase E1 component
PDCPOIID_00992 0.0 bfmBC 1.8.1.4 - C ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
PDCPOIID_00993 6.41e-261 buk 2.7.2.7 - C ko:K00929 ko00650,ko01100,map00650,map01100 ko00000,ko00001,ko01000 Acetokinase family
PDCPOIID_00994 3.36e-188 ptb 2.3.1.19 - C ko:K00634 ko00650,ko01100,map00650,map01100 ko00000,ko00001,ko01000 Phosphate acetyl/butaryl transferase
PDCPOIID_00995 1.02e-145 pyrE 2.4.2.10 - F ko:K00762 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PDCPOIID_00996 1.55e-162 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PDCPOIID_00997 1.63e-199 pyrD 1.3.1.14, 1.3.98.1 - F ko:K00226,ko:K17828 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PDCPOIID_00998 0.0 carB 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase
PDCPOIID_00999 5.32e-267 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase glutamine chain
PDCPOIID_01000 2e-302 pyrC 3.5.2.3 - F ko:K01465 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PDCPOIID_01001 7.64e-229 pyrB 2.1.3.2 - F ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
PDCPOIID_01002 1.64e-299 pyrP - - F ko:K02824 - ko00000,ko02000 Permease
PDCPOIID_01003 1.05e-125 pyrR 2.4.2.9 - F ko:K02825 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000,ko03000 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PDCPOIID_01004 5.18e-222 rluD 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
PDCPOIID_01005 2.41e-106 lspA 3.4.23.36 - MU ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PDCPOIID_01006 0.0 fhs 6.3.4.3 - F ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the formate--tetrahydrofolate ligase family
PDCPOIID_01007 8.5e-61 - - - S - - - Family of unknown function (DUF5322)
PDCPOIID_01008 3.93e-90 rnhA 3.1.26.4 - L ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Ribonuclease HI
PDCPOIID_01009 1.21e-142 XK27_02070 - - S ko:K07078 - ko00000 Nitroreductase family
PDCPOIID_01010 0.0 cls - - I ko:K06131 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PDCPOIID_01011 1.91e-63 - - - - - - - -
PDCPOIID_01012 2.64e-294 - - - S - - - Mga helix-turn-helix domain
PDCPOIID_01013 3.39e-26 - - - S - - - Mga helix-turn-helix domain
PDCPOIID_01014 8.72e-52 nrdH - - O ko:K06191 - ko00000 Glutaredoxin
PDCPOIID_01015 0.0 nrdE 1.17.4.1 - F ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDCPOIID_01016 8.83e-242 nrdF 1.17.4.1 - F ko:K00526 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDCPOIID_01017 7.8e-206 lysR - - K - - - Transcriptional regulator
PDCPOIID_01018 0.0 pepO - - O ko:K07386 - ko00000,ko01000,ko01002 Peptidase family M13
PDCPOIID_01019 2.02e-248 lplA 6.3.1.20 - H ko:K03800 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Lipoate-protein ligase
PDCPOIID_01020 7.29e-46 - - - - - - - -
PDCPOIID_01021 1.22e-220 serA 1.1.1.399, 1.1.1.95 - EH ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PDCPOIID_01022 9.39e-278 ypsC - - L ko:K07444 - ko00000,ko01000 Belongs to the methyltransferase superfamily
PDCPOIID_01023 3.16e-126 - - - D - - - Relaxase/Mobilisation nuclease domain
PDCPOIID_01024 2.31e-21 mobC - - S - - - Bacterial mobilisation protein (MobC)
PDCPOIID_01025 3.02e-141 - - - L - - - Initiator Replication protein
PDCPOIID_01034 1.71e-178 rfbB 4.2.1.46 - M ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PDCPOIID_01038 4.21e-49 - - - T - - - Calcineurin-like phosphoesterase superfamily domain
PDCPOIID_01039 0.0 yvdP - - C - - - COG0277 FAD FMN-containing dehydrogenases
PDCPOIID_01040 1.06e-49 - - - - - - - -
PDCPOIID_01041 7.64e-57 - - - S - - - Protein of unknown function (DUF2089)
PDCPOIID_01042 3.17e-235 yveB - - I - - - PAP2 superfamily
PDCPOIID_01043 5.31e-266 mccF - - V - - - LD-carboxypeptidase
PDCPOIID_01044 6.55e-57 - - - - - - - -
PDCPOIID_01045 2.61e-261 ddl 6.3.2.4 - F ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Belongs to the D-alanine--D-alanine ligase family
PDCPOIID_01046 3.37e-115 adaB 2.1.1.63 - L ko:K00567,ko:K10778,ko:K13531 - ko00000,ko01000,ko03000,ko03400 Methyltransferase
PDCPOIID_01047 1.17e-245 ldhD3 1.1.1.28 - CH ko:K03778 ko00620,ko01120,map00620,map01120 ko00000,ko00001,ko01000 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDCPOIID_01048 6.75e-57 - - - - - - - -
PDCPOIID_01049 6.94e-106 - - - K - - - Transcriptional regulator
PDCPOIID_01050 5.79e-207 - 1.6.5.5 - C ko:K00344 - ko00000,ko01000 alcohol dehydrogenase
PDCPOIID_01051 1.55e-70 - - - S ko:K08987 - ko00000 Protein of unknown function (DUF1304)
PDCPOIID_01052 2.42e-72 - - - S - - - Protein of unknown function (DUF1516)
PDCPOIID_01053 0.0 XK27_07275 - - S ko:K06901 - ko00000,ko02000 permease
PDCPOIID_01054 1.2e-61 - - - S ko:K09004 - ko00000 DsrE/DsrF-like family
PDCPOIID_01055 4.12e-228 mhqA - - E ko:K15975 - ko00000 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PDCPOIID_01056 6.64e-39 - - - - - - - -
PDCPOIID_01057 4.96e-133 yoaA - - J - - - COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PDCPOIID_01058 0.0 - - - - - - - -
PDCPOIID_01060 2e-167 - - - S - - - WxL domain surface cell wall-binding
PDCPOIID_01061 2.04e-171 - - - S - - - WxL domain surface cell wall-binding
PDCPOIID_01062 1.99e-241 ynjC - - S - - - Cell surface protein
PDCPOIID_01064 0.0 - - - L - - - Mga helix-turn-helix domain
PDCPOIID_01065 3.07e-218 - - - S - - - Protein of unknown function (DUF805)
PDCPOIID_01066 1.1e-76 - - - - - - - -
PDCPOIID_01067 0.0 rarA - - L ko:K07478 - ko00000 recombination factor protein RarA
PDCPOIID_01068 1.77e-281 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PDCPOIID_01069 1.58e-202 pphA 3.1.3.16 - T ko:K07313 - ko00000,ko01000 Calcineurin-like phosphoesterase superfamily domain
PDCPOIID_01070 2.6e-176 - - - L ko:K07457 - ko00000 Base excision DNA repair protein, HhH-GPD family
PDCPOIID_01071 8.86e-62 - - - S - - - Thiamine-binding protein
PDCPOIID_01072 0.0 yhgE - - V ko:K01421 - ko00000 domain protein
PDCPOIID_01073 1.48e-128 - - - K - - - Bacterial regulatory proteins, tetR family
PDCPOIID_01074 5.15e-142 - - - S - - - Flavodoxin-like fold
PDCPOIID_01077 2.3e-254 pgl 3.1.1.31 - G ko:K07404 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Lactonase, 7-bladed beta-propeller
PDCPOIID_01078 4.71e-81 srlB 2.7.1.198 - G ko:K02781 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system glucitol/sorbitol-specific IIA component
PDCPOIID_01079 4.12e-56 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PDCPOIID_01080 4.94e-245 guaC 1.7.1.7 - F ko:K00364 ko00230,map00230 ko00000,ko00001,ko01000 Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PDCPOIID_01081 1.94e-219 corA - - P ko:K03284 - ko00000,ko02000 CorA-like Mg2+ transporter protein
PDCPOIID_01082 3.44e-200 rrmA 2.1.1.187 - H ko:K00563,ko:K10947 - ko00000,ko01000,ko03000,ko03009 Methyltransferase
PDCPOIID_01083 3.21e-125 cspR 2.1.1.207 - J ko:K03216 - ko00000,ko01000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PDCPOIID_01084 4.04e-94 - - - S - - - Protein of unknown function (DUF1149)
PDCPOIID_01085 0.0 ftsK - - D ko:K03466 - ko00000,ko03036 Belongs to the FtsK SpoIIIE SftA family
PDCPOIID_01086 2.21e-294 ymfF - - S - - - Peptidase M16 inactive domain protein
PDCPOIID_01087 2.38e-310 ymfH - - S - - - Peptidase M16
PDCPOIID_01088 3.01e-166 fabG 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Enoyl-(Acyl carrier protein) reductase
PDCPOIID_01089 7.01e-157 ymfM - - S ko:K15539 - ko00000 Helix-turn-helix domain
PDCPOIID_01090 3.46e-136 pgsA 2.7.8.5 - I ko:K00995 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PDCPOIID_01091 1.05e-293 cinA 3.5.1.42 - S ko:K03742,ko:K03743 ko00760,map00760 ko00000,ko00001,ko01000 Belongs to the CinA family
PDCPOIID_01092 5.55e-245 recA - - L ko:K03553 ko03440,map03440 ko00000,ko00001,ko00002,ko03400 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PDCPOIID_01093 7.95e-317 rny - - S ko:K18682 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Endoribonuclease that initiates mRNA decay
PDCPOIID_01094 2.93e-151 yvyE 3.4.13.9 - S ko:K01271 - ko00000,ko01000,ko01002 YigZ family
PDCPOIID_01095 1.64e-301 comFA - - L ko:K02240 - ko00000,ko00002,ko02044 Helicase C-terminal domain protein
PDCPOIID_01096 4.32e-104 comFC - - S ko:K02242 - ko00000,ko00002,ko02044 Competence protein
PDCPOIID_01097 3.24e-126 hpf - - J ko:K05808 - ko00000,ko03009 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PDCPOIID_01098 0.0 secA - - U ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PDCPOIID_01099 8.69e-239 prfB - - J ko:K02836 - ko00000,ko03012 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PDCPOIID_01100 1.28e-160 ftsE - - D ko:K09812 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03036 ABC transporter
PDCPOIID_01102 7.77e-259 minJ - - O - - - Domain present in PSD-95, Dlg, and ZO-1/2.
PDCPOIID_01103 1.83e-168 phoP - - K ko:K07658 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 response regulator
PDCPOIID_01104 0.0 phoR 2.7.13.3 - T ko:K07636 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
PDCPOIID_01105 1.76e-196 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 Phosphate
PDCPOIID_01106 4.48e-205 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
PDCPOIID_01107 1.06e-201 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphate transport system permease protein PstA
PDCPOIID_01108 9.06e-192 pstB2 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PDCPOIID_01109 2.49e-180 pstB1 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PDCPOIID_01110 3.82e-156 phoU - - P ko:K02039 - ko00000 Plays a role in the regulation of phosphate uptake
PDCPOIID_01111 0.0 yvlB - - S - - - Putative adhesin
PDCPOIID_01112 5.23e-50 - - - - - - - -
PDCPOIID_01113 3.07e-50 yvlD - - S ko:K08972 - ko00000 Mycobacterial 4 TMS phage holin, superfamily IV
PDCPOIID_01114 8.27e-223 hprK - - F ko:K06023 - ko00000,ko01000 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PDCPOIID_01115 9.99e-213 lgt - - M ko:K13292 - ko00000,ko01000 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PDCPOIID_01116 6.29e-250 gpsA 1.1.1.94 - I ko:K00057 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 Glycerol-3-phosphate dehydrogenase
PDCPOIID_01117 1.43e-226 trxB 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PDCPOIID_01118 0.0 pgm 5.4.2.2 - G ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PDCPOIID_01119 6.38e-148 - - - T - - - Transcriptional regulatory protein, C terminal
PDCPOIID_01120 5.51e-214 - - - T - - - His Kinase A (phosphoacceptor) domain
PDCPOIID_01121 6.97e-117 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
PDCPOIID_01122 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
PDCPOIID_01123 1.99e-153 yfbR - - S ko:K07023 - ko00000 HD containing hydrolase-like enzyme
PDCPOIID_01124 0.0 uvrB - - L ko:K03702 ko03420,map03420 ko00000,ko00001,ko03400 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PDCPOIID_01125 0.0 uvrA - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PDCPOIID_01126 2.56e-111 - - - S - - - Short repeat of unknown function (DUF308)
PDCPOIID_01127 8.53e-213 yvcJ - - S ko:K06958 - ko00000,ko03019 Displays ATPase and GTPase activities
PDCPOIID_01128 1.22e-247 yvcK - - S - - - Required for morphogenesis under gluconeogenic growth conditions
PDCPOIID_01129 7.91e-219 whiA - - K ko:K09762 - ko00000 May be required for sporulation
PDCPOIID_01130 3.19e-105 ohrR - - K ko:K18906 - ko00000,ko00002,ko01504,ko03000 helix_turn_helix multiple antibiotic resistance protein
PDCPOIID_01131 5.97e-132 clpP 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PDCPOIID_01133 4.8e-28 - - - M - - - Host cell surface-exposed lipoprotein
PDCPOIID_01134 5.52e-241 cggR - - K ko:K05311 - ko00000,ko03000 Putative sugar-binding domain
PDCPOIID_01135 2.1e-247 gap 1.2.1.12 - G ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PDCPOIID_01136 2.16e-282 pgk 2.7.2.3 - F ko:K00927 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the phosphoglycerate kinase family
PDCPOIID_01137 2.81e-180 tpiA 5.3.1.1 - G ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PDCPOIID_01138 2.05e-313 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PDCPOIID_01139 2.4e-233 mdt(A) - - EGP ko:K08217 - br01600,ko00000,ko01504,ko02000 Transmembrane secretion effector
PDCPOIID_01140 3.37e-38 mdt(A) - - EGP ko:K08217 - br01600,ko00000,ko01504,ko02000 Transmembrane secretion effector
PDCPOIID_01141 2.34e-44 - - - - - - - -
PDCPOIID_01142 0.0 eriC - - P ko:K03281 - ko00000 chloride
PDCPOIID_01143 5.04e-43 secG - - U ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase
PDCPOIID_01144 6.65e-180 est 3.1.1.1 - S ko:K03928 - ko00000,ko01000 Serine aminopeptidase, S33
PDCPOIID_01145 0.0 rnr - - J ko:K12573 ko03018,map03018 ko00000,ko00001,ko01000,ko03016,ko03019 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PDCPOIID_01146 4.47e-108 smpB - - J ko:K03664 - ko00000 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PDCPOIID_01147 5.36e-33 - - - - - - - -
PDCPOIID_01148 5.87e-109 - - - S - - - ASCH
PDCPOIID_01149 8.85e-76 - - - - - - - -
PDCPOIID_01150 0.0 recJ - - L ko:K07462 ko03410,ko03430,ko03440,map03410,map03430,map03440 ko00000,ko00001,ko01000,ko03400 Single-stranded-DNA-specific exonuclease RecJ
PDCPOIID_01151 1.7e-123 apt 2.4.2.7 - F ko:K00759 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000,ko04147 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PDCPOIID_01152 2.86e-118 ybaK - - S ko:K03976 - ko00000,ko01000,ko03016 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PDCPOIID_01153 1.66e-71 XK27_08430 - - S - - - Staphylococcal protein of unknown function (DUF960)
PDCPOIID_01154 2.69e-186 hutG 3.5.3.8 - E ko:K01479 ko00340,ko01100,map00340,map01100 ko00000,ko00001,ko00002,ko01000 N-formylglutamate amidohydrolase
PDCPOIID_01156 4.52e-87 - - - K ko:K18909 - ko00000,ko00002,ko01504,ko03000 MarR family
PDCPOIID_01157 2.84e-63 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2316)
PDCPOIID_01158 5.57e-290 - - - C - - - Iron-containing alcohol dehydrogenase
PDCPOIID_01159 6e-245 - - - E - - - Alpha/beta hydrolase family
PDCPOIID_01160 6.79e-95 - 4.2.1.59 - I ko:K02372 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 FabA-like domain
PDCPOIID_01161 2.44e-99 - - - K - - - Winged helix DNA-binding domain
PDCPOIID_01162 3.96e-226 fabH 2.3.1.180 - I ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PDCPOIID_01163 1.38e-45 acpP - - IQ ko:K02078 - ko00000,ko00001 Carrier of the growing fatty acid chain in fatty acid biosynthesis
PDCPOIID_01164 4.56e-220 fabK 1.3.1.9 - S ko:K02371 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Nitronate monooxygenase
PDCPOIID_01165 2.42e-209 fabD 2.3.1.39 - I ko:K00645,ko:K15327,ko:K15329 ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004,ko01008 Malonyl CoA-acyl carrier protein transacylase
PDCPOIID_01166 8.26e-164 fabG 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 reductase
PDCPOIID_01167 1.11e-280 fabF 2.3.1.179 - I ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PDCPOIID_01168 8.8e-93 accB - - I ko:K02160 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PDCPOIID_01169 3.77e-97 fabZ 4.2.1.59 - I ko:K02372 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PDCPOIID_01170 0.0 accC 6.3.4.14, 6.4.1.2 - I ko:K01961 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Acetyl-CoA carboxylase biotin carboxylase subunit
PDCPOIID_01171 8.74e-194 accD 2.1.3.15, 6.4.1.2 - I ko:K01963 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PDCPOIID_01172 3.41e-184 accA 2.1.3.15, 6.4.1.2 - I ko:K01962 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 alpha subunit
PDCPOIID_01173 3.95e-297 cfa 2.1.1.79 - M ko:K00574 - ko00000,ko01000 cyclopropane-fatty-acyl-phospholipid synthase
PDCPOIID_01174 2.34e-208 - - - GM - - - NmrA-like family
PDCPOIID_01175 0.0 scrB 3.2.1.26 GH32 G ko:K01193 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 invertase
PDCPOIID_01176 3.69e-233 purR2 - - K ko:K02529 - ko00000,ko03000 Periplasmic binding proteins and sugar binding domain of LacI family
PDCPOIID_01177 0.0 malL 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain protein
PDCPOIID_01178 0.0 pts26BCA 2.7.1.211 - G ko:K02808,ko:K02809,ko:K02810 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
PDCPOIID_01179 8.84e-120 ccpN - - K - - - Domain in cystathionine beta-synthase and other proteins.
PDCPOIID_01180 0.0 ppdK 2.7.9.1 - G ko:K01006 ko00620,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00710,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the PEP-utilizing enzyme family
PDCPOIID_01181 0.0 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
PDCPOIID_01182 1.17e-213 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
PDCPOIID_01183 3.52e-275 - - - S ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
PDCPOIID_01184 1.49e-251 - - - - ko:K01992 - ko00000,ko00002,ko02000 -
PDCPOIID_01185 0.0 pepC 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
PDCPOIID_01186 0.0 pepE 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 aminopeptidase
PDCPOIID_01187 5.93e-93 - - - S - - - Protein of unknown function (DUF805)
PDCPOIID_01188 1e-66 yjdJ - - S ko:K06975 - ko00000 GCN5-related N-acetyl-transferase
PDCPOIID_01189 4.85e-130 dut 3.6.1.23 - F ko:K01520 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 dUTPase
PDCPOIID_01190 0.0 radA - - O ko:K04485 - ko00000,ko03400 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PDCPOIID_01191 5.49e-261 yacL - - S - - - domain protein
PDCPOIID_01192 4e-202 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PDCPOIID_01193 4.73e-90 - - - S ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
PDCPOIID_01194 1.65e-286 inlJ - - M - - - MucBP domain
PDCPOIID_01195 1.07e-81 - - - K - - - helix_turn_helix gluconate operon transcriptional repressor
PDCPOIID_01196 6.8e-227 - - - S - - - Membrane
PDCPOIID_01197 2.26e-146 yhfC - - S - - - Putative membrane peptidase family (DUF2324)
PDCPOIID_01198 1.73e-182 - - - K - - - SIS domain
PDCPOIID_01199 3.52e-151 rpiA1 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
PDCPOIID_01200 3.31e-237 XK27_10475 - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
PDCPOIID_01201 0.0 gltX 6.1.1.24 - J ko:K09698 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PDCPOIID_01203 5.14e-137 - - - - - - - -
PDCPOIID_01204 0.0 loxD 1.1.3.15 - C ko:K00104 ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130 ko00000,ko00001,ko01000 FAD linked oxidases, C-terminal domain
PDCPOIID_01205 1.81e-315 brnQ - - U ko:K03311 - ko00000 Component of the transport system for branched-chain amino acids
PDCPOIID_01206 4.84e-256 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
PDCPOIID_01207 0.0 pepF - - E ko:K08602 - ko00000,ko01000,ko01002 oligoendopeptidase F
PDCPOIID_01208 1.02e-203 glxR 1.1.1.31 - I ko:K00020 ko00280,ko01100,map00280,map01100 ko00000,ko00001,ko01000 Dehydrogenase
PDCPOIID_01209 9.96e-210 prpA3 3.1.3.16 - T ko:K01090 - ko00000,ko01000 Calcineurin-like phosphoesterase superfamily domain
PDCPOIID_01210 9.9e-172 znuB - - U ko:K02075,ko:K09816 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC 3 transport family
PDCPOIID_01211 3.39e-166 adcC - - P ko:K02074,ko:K09817,ko:K11710 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
PDCPOIID_01212 3.74e-75 - - - - - - - -
PDCPOIID_01213 6.25e-195 - - - S - - - Protein conserved in bacteria
PDCPOIID_01214 4.1e-287 cps1C - - S ko:K03328 - ko00000 Membrane protein involved in the export of O-antigen and teichoic acid
PDCPOIID_01215 1.29e-148 - - GT2 M ko:K12997 - ko00000,ko01000,ko01003,ko01005 Glycosyl transferase family 2
PDCPOIID_01216 1e-122 welB - - S - - - Glycosyltransferase like family 2
PDCPOIID_01217 2.96e-116 - - - S - - - Glycosyl transferase family 2
PDCPOIID_01218 1.03e-259 - - - S - - - O-antigen ligase like membrane protein
PDCPOIID_01219 2.65e-149 gntP - - EG ko:K03299 - ko00000,ko02000 Gluconate
PDCPOIID_01220 7.77e-74 - - - S ko:K07118 - ko00000 NAD(P)H-binding
PDCPOIID_01222 1.94e-251 - - - - - - - -
PDCPOIID_01223 9.5e-199 thiD 2.7.1.49, 2.7.4.7 - H ko:K00941 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Phosphomethylpyrimidine kinase
PDCPOIID_01224 1.92e-153 - - - S - - - Psort location Cytoplasmic, score
PDCPOIID_01225 2.6e-113 - - - S - - - Short repeat of unknown function (DUF308)
PDCPOIID_01227 1.5e-156 yrkL - - S - - - Flavodoxin-like fold
PDCPOIID_01228 1.84e-190 - - - I - - - alpha/beta hydrolase fold
PDCPOIID_01229 9.11e-266 mutY - - L ko:K03575 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 A G-specific adenine glycosylase
PDCPOIID_01231 7.42e-112 hsp1 - - O ko:K13993 ko04141,map04141 ko00000,ko00001,ko03110 Belongs to the small heat shock protein (HSP20) family
PDCPOIID_01232 6.8e-21 - - - - - - - -
PDCPOIID_01233 0.0 sbcC - - L ko:K03546 - ko00000,ko03400 Putative exonuclease SbcCD, C subunit
PDCPOIID_01234 3.77e-269 sbcD - - L ko:K03547 - ko00000,ko03400 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PDCPOIID_01235 3.73e-150 - - - S - - - HAD hydrolase, family IA, variant
PDCPOIID_01236 4.13e-181 - - - K ko:K02530 - ko00000,ko03000 DeoR C terminal sensor domain
PDCPOIID_01237 1.25e-96 lacA 5.3.1.26 - G ko:K01819 ko00052,ko01100,map00052,map01100 ko00000,ko00001,ko01000 Ribose/Galactose Isomerase
PDCPOIID_01238 1.3e-121 lacB 5.3.1.26 - G ko:K01819 ko00052,ko01100,map00052,map01100 ko00000,ko00001,ko01000 Ribose/Galactose Isomerase
PDCPOIID_01239 8.46e-239 lacD 4.1.2.40 - G ko:K01635 ko00052,ko01100,ko02024,map00052,map01100,map02024 ko00000,ko00001,ko01000 Belongs to the aldolase LacD family
PDCPOIID_01240 7.11e-225 lacC 2.7.1.144 - H ko:K00917 ko00052,ko01100,map00052,map01100 ko00000,ko00001,ko01000 pfkB family carbohydrate kinase
PDCPOIID_01241 4.48e-160 - - - S - - - Domain of unknown function (DUF4867)
PDCPOIID_01242 9.83e-37 - - - - - - - -
PDCPOIID_01243 0.0 gatC - - G ko:K20114 ko02060,map02060 ko00000,ko00001,ko00002,ko02000 PTS system sugar-specific permease component
PDCPOIID_01244 2.68e-67 - 2.7.1.204 - G ko:K20113 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
PDCPOIID_01245 4.58e-109 - 2.7.1.204 - G ko:K20112 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PDCPOIID_01248 6.81e-251 galM 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the interconversion of alpha and beta anomers of maltose
PDCPOIID_01249 5.09e-192 - - - S - - - Putative transposase
PDCPOIID_01250 0.0 - - - M - - - domain protein
PDCPOIID_01251 2.03e-307 - - - - - - - -
PDCPOIID_01252 0.0 - - - M - - - Cna protein B-type domain
PDCPOIID_01253 1.56e-189 - 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
PDCPOIID_01254 2.79e-295 - - - S - - - Membrane
PDCPOIID_01255 2.57e-55 - - - - - - - -
PDCPOIID_01257 3.82e-191 proB 2.7.2.11 - F ko:K00931 ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PDCPOIID_01258 1.56e-277 proA 1.2.1.41 - E ko:K00147 ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PDCPOIID_01259 8.53e-287 - - - EGP - - - Transmembrane secretion effector
PDCPOIID_01260 5.02e-52 - - - - - - - -
PDCPOIID_01261 1.5e-44 - - - - - - - -
PDCPOIID_01263 1.59e-28 yhjA - - K - - - CsbD-like
PDCPOIID_01264 3.59e-21 lctO 1.13.12.4 - C ko:K00467,ko:K10530 ko00620,map00620 ko00000,ko00001,ko01000 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
PDCPOIID_01265 5.76e-225 lctO 1.13.12.4 - C ko:K00467,ko:K10530 ko00620,map00620 ko00000,ko00001,ko01000 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
PDCPOIID_01266 5.25e-61 - - - - - - - -
PDCPOIID_01267 4.71e-263 - - - S - - - Bacterial low temperature requirement A protein (LtrA)
PDCPOIID_01268 1.19e-158 gpmA1 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PDCPOIID_01269 1.26e-64 cydA 1.10.3.14 - C ko:K00425 ko00190,ko01100,ko02020,map00190,map01100,map02020 ko00000,ko00001,ko00002,ko01000 Cytochrome bd terminal oxidase subunit I
PDCPOIID_01270 4.46e-183 terC - - P - - - Integral membrane protein TerC family
PDCPOIID_01271 2.83e-213 truB 5.4.99.25 - J ko:K03177,ko:K03483 - ko00000,ko01000,ko03000,ko03016 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PDCPOIID_01272 9.76e-229 ribF 2.7.1.26, 2.7.7.2 - H ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the ribF family
PDCPOIID_01273 8.81e-288 hemN - - H - - - Involved in the biosynthesis of porphyrin-containing compound
PDCPOIID_01274 1.6e-246 hrcA - - K ko:K03705 - ko00000,ko03000 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PDCPOIID_01275 3.18e-127 grpE - - O ko:K03687 - ko00000,ko03029,ko03110 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PDCPOIID_01276 0.0 dnaK - - O ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Heat shock 70 kDa protein
PDCPOIID_01277 9.45e-261 dnaJ - - O ko:K03686 - ko00000,ko03029,ko03110 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PDCPOIID_01278 0.0 lepA - - M ko:K03596 ko05134,map05134 ko00000,ko00001 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PDCPOIID_01279 2.29e-131 - - - Q - - - methyltransferase
PDCPOIID_01281 3.21e-147 - - - GM - - - NmrA-like family
PDCPOIID_01282 1.09e-252 adh2 1.1.1.1 - E ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 alcohol dehydrogenase
PDCPOIID_01283 4.3e-106 - - - C - - - Flavodoxin
PDCPOIID_01284 5.77e-93 adhR - - K - - - helix_turn_helix, mercury resistance
PDCPOIID_01285 7.09e-113 bioY - - S ko:K03523 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 BioY family
PDCPOIID_01286 1.54e-84 - - - - - - - -
PDCPOIID_01287 1.3e-284 queG 1.17.99.6 - C ko:K18979 - ko00000,ko01000,ko03016 Domain of unknown function (DUF1730)
PDCPOIID_01288 6.37e-187 ptp3 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
PDCPOIID_01289 3.25e-74 - - - K - - - Helix-turn-helix domain
PDCPOIID_01290 9.59e-101 usp5 - - T - - - universal stress protein
PDCPOIID_01291 1.64e-142 tag 3.2.2.20 - L ko:K01246 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 glycosylase
PDCPOIID_01292 1.72e-213 - - - EG - - - EamA-like transporter family
PDCPOIID_01293 6.71e-34 - - - - - - - -
PDCPOIID_01294 1.22e-112 - - - - - - - -
PDCPOIID_01295 6.98e-53 - - - - - - - -
PDCPOIID_01296 7.59e-245 add 3.5.4.2, 3.5.4.4 - F ko:K01488,ko:K02029,ko:K21053 ko00230,ko01100,ko05340,map00230,map01100,map05340 ko00000,ko00001,ko00002,ko01000,ko02000 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PDCPOIID_01297 2.86e-304 pdp 2.4.2.2 - F ko:K00756 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 pyrimidine-nucleoside phosphorylase
PDCPOIID_01299 0.0 cydA 1.10.3.14 - C ko:K00425 ko00190,ko01100,ko02020,map00190,map01100,map02020 ko00000,ko00001,ko00002,ko01000 ubiquinol oxidase
PDCPOIID_01300 2.5e-233 cydB 1.10.3.14 - C ko:K00426 ko00190,ko01100,ko02020,map00190,map01100,map02020 ko00000,ko00001,ko00002,ko01000 Cytochrome d ubiquinol oxidase subunit II
PDCPOIID_01301 0.0 cydC - - CO ko:K16013 ko02010,map02010 ko00000,ko00001,ko02000 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PDCPOIID_01302 0.0 cydD - - CO ko:K16012 ko02010,map02010 ko00000,ko00001,ko02000 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
PDCPOIID_01303 6.43e-66 - - - - - - - -
PDCPOIID_01304 1.12e-82 - - - S - - - Protein of unknown function (DUF1093)
PDCPOIID_01305 1.03e-278 - - - S - - - Membrane
PDCPOIID_01306 6.29e-179 - - - - - - - -
PDCPOIID_01307 0.0 cas9 - - L ko:K09952 - ko00000,ko01000,ko02048 CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
PDCPOIID_01308 2.09e-82 cas1 - - L ko:K15342 - ko00000,ko02048,ko03400 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PDCPOIID_01309 6.7e-68 cas1 - - L ko:K15342 - ko00000,ko02048,ko03400 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PDCPOIID_01310 5.73e-62 cas2 - - L ko:K09951 - ko00000,ko02048 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PDCPOIID_01311 5.37e-147 - - - S - - - CRISPR-associated protein (Cas_Csn2)
PDCPOIID_01312 1.5e-149 yhfA - - S - - - HAD hydrolase, family IA, variant 3
PDCPOIID_01313 5.03e-230 - - - S - - - Protein of unknown function (DUF2785)
PDCPOIID_01314 9.85e-88 - - - S - - - Protein of unknown function (DUF1694)
PDCPOIID_01315 3.9e-30 - - - - - - - -
PDCPOIID_01316 0.0 sufB - - O ko:K07033,ko:K09014 - ko00000 assembly protein SufB
PDCPOIID_01317 4.06e-102 nifU - - C ko:K04488 - ko00000 SUF system FeS assembly protein, NifU family
PDCPOIID_01318 4.67e-278 sufS 2.8.1.7, 4.4.1.16 - E ko:K11717 ko00450,ko01100,map00450,map01100 ko00000,ko00001,ko01000 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PDCPOIID_01319 4.72e-244 sufD - - O ko:K07033,ko:K09015 - ko00000 FeS assembly protein SufD
PDCPOIID_01320 4.15e-184 sufC - - O ko:K09013 - ko00000,ko02000 FeS assembly ATPase SufC
PDCPOIID_01321 1.31e-149 metI - - P ko:K02072 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PDCPOIID_01322 4.21e-243 metN - - P ko:K02071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PDCPOIID_01323 8.04e-192 - - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the nlpA lipoprotein family
PDCPOIID_01325 1.88e-186 - - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the nlpA lipoprotein family
PDCPOIID_01326 6.45e-284 - 3.5.1.18 - E ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 succinyl-diaminopimelate desuccinylase
PDCPOIID_01327 1.71e-64 gcsH2 - - E ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 ko00000,ko00001,ko00002 glycine cleavage
PDCPOIID_01328 1.41e-285 rodA - - D ko:K05837 - ko00000,ko03036 Belongs to the SEDS family
PDCPOIID_01329 3.41e-41 - - - S - - - Protein of unknown function (DUF2969)
PDCPOIID_01330 1.14e-72 ytjA - - S ko:K08998 - ko00000 Could be involved in insertion of integral membrane proteins into the membrane
PDCPOIID_01331 1.37e-26 - - - S - - - DNA-directed RNA polymerase subunit beta
PDCPOIID_01332 4.12e-228 mbl - - D ko:K03569 - ko00000,ko02048,ko03036,ko04812 Cell shape determining protein MreB Mrl
PDCPOIID_01333 8.38e-42 - - - S - - - Protein of unknown function (DUF1146)
PDCPOIID_01334 1.88e-91 atpC - - C ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane
PDCPOIID_01335 0.0 atpD 3.6.3.14 - C ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PDCPOIID_01336 1.92e-211 atpG - - C ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PDCPOIID_01337 0.0 atpA 3.6.3.14 - C ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PDCPOIID_01338 1.13e-115 atpH - - C ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDCPOIID_01339 1.46e-79 atpF - - C ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PDCPOIID_01340 2.57e-37 atpE - - C ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDCPOIID_01341 1.74e-162 atpB - - C ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko03110 it plays a direct role in the translocation of protons across the membrane
PDCPOIID_01342 3.05e-145 upp 2.4.2.9 - F ko:K00761 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PDCPOIID_01343 1.57e-298 glyA 2.1.2.1 - E ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PDCPOIID_01344 1.99e-237 ywlC 2.7.7.87 - J ko:K07566 - ko00000,ko01000,ko03009,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PDCPOIID_01345 1.83e-193 prmC 2.1.1.297 - J ko:K02493 - ko00000,ko01000,ko03012 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PDCPOIID_01346 3.51e-251 prfA - - J ko:K02835 - ko00000,ko03012 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PDCPOIID_01347 4.41e-143 tdk 2.7.1.21 - F ko:K00857 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 thymidine kinase
PDCPOIID_01348 0.0 murE2 6.3.2.13 - M ko:K01928 ko00300,ko00550,map00300,map00550 ko00000,ko00001,ko01000,ko01011 Domain of unknown function (DUF1727)
PDCPOIID_01349 1.3e-251 ampC - - V - - - Beta-lactamase
PDCPOIID_01350 9.19e-209 catE 1.13.11.2 - S ko:K07104 ko00361,ko00362,ko00622,ko00643,ko01100,ko01120,ko01220,map00361,map00362,map00622,map00643,map01100,map01120,map01220 ko00000,ko00001,ko00002,ko01000 glyoxalase
PDCPOIID_01351 3.03e-180 - - - S - - - NADPH-dependent FMN reductase
PDCPOIID_01352 1.52e-208 - - - S - - - WxL domain surface cell wall-binding
PDCPOIID_01353 2.08e-208 hslO - - O ko:K04083 - ko00000,ko03110 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PDCPOIID_01354 3.08e-241 dus - - J ko:K05540 - ko00000,ko01000,ko03016 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PDCPOIID_01355 0.0 lysS 6.1.1.6 - J ko:K04567 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family
PDCPOIID_01356 2.48e-151 - - - S - - - CRISPR-associated protein (Cas_Csn2)
PDCPOIID_01357 5.98e-66 cas2 - - L ko:K09951 - ko00000,ko02048 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PDCPOIID_01358 2.59e-201 cas1 - - L ko:K15342 - ko00000,ko02048,ko03400 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PDCPOIID_01359 0.0 cas9 - - L ko:K09952 - ko00000,ko01000,ko02048 CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
PDCPOIID_01360 6.56e-181 trpA 4.2.1.20 - E ko:K01695 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PDCPOIID_01361 7.1e-293 trpB 4.2.1.20, 5.3.1.24 - E ko:K01696,ko:K01817 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PDCPOIID_01362 1.11e-133 trpF 5.3.1.24 - E ko:K01817 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the TrpF family
PDCPOIID_01363 4.43e-177 trpC 4.1.1.48, 5.3.1.24 - E ko:K01609,ko:K13498 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the TrpC family
PDCPOIID_01364 1.19e-233 trpD 2.4.2.18, 4.1.3.27 - F ko:K00766,ko:K13497 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PDCPOIID_01365 2.07e-262 - - - - - - - -
PDCPOIID_01366 0.0 - - - EGP - - - Major Facilitator
PDCPOIID_01367 1.04e-139 - - - K - - - Bacterial regulatory proteins, tetR family
PDCPOIID_01369 2.84e-154 - - - - - - - -
PDCPOIID_01372 5.93e-43 - - - S - - - Protein of unknown function (DUF979)
PDCPOIID_01373 1.08e-146 - - - S - - - Protein of unknown function (DUF969)
PDCPOIID_01375 1.97e-92 asp2 - - S - - - Asp23 family, cell envelope-related function
PDCPOIID_01376 8.12e-90 asp23 - - S - - - Asp23 family, cell envelope-related function
PDCPOIID_01377 4.15e-34 - - - - - - - -
PDCPOIID_01378 1.16e-112 - - - S - - - Protein conserved in bacteria
PDCPOIID_01379 1.93e-52 - - - S - - - Transglycosylase associated protein
PDCPOIID_01380 2.27e-94 - - - S ko:K07006 - ko00000 Pyridoxamine 5'-phosphate oxidase
PDCPOIID_01381 2.86e-219 - 1.1.1.26 - CH ko:K00015 ko00630,ko01100,ko01110,ko01120,map00630,map01100,map01110,map01120 ko00000,ko00001,ko01000 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDCPOIID_01382 2.82e-36 - - - - - - - -
PDCPOIID_01383 5.54e-50 - - - - - - - -
PDCPOIID_01384 1.63e-109 - - - C - - - Flavodoxin
PDCPOIID_01385 4.85e-65 - - - - - - - -
PDCPOIID_01386 1.47e-116 - - - - - - - -
PDCPOIID_01387 1.47e-07 - - - - - - - -
PDCPOIID_01388 6.45e-74 ywjH - - S - - - Protein of unknown function (DUF1634)
PDCPOIID_01389 8.76e-178 yunE - - S ko:K07090 - ko00000 Sulfite exporter TauE/SafE
PDCPOIID_01390 2.97e-287 - - - S ko:K06872 - ko00000 TPM domain
PDCPOIID_01391 6.18e-150 - - - - - - - -
PDCPOIID_01392 0.0 nox 1.6.3.4 - C ko:K17869 - ko00000,ko01000 NADH oxidase
PDCPOIID_01393 0.0 fnq20 - - S - - - FAD-NAD(P)-binding
PDCPOIID_01394 3.59e-141 ywdE - - K ko:K20375 ko02024,map02024 ko00000,ko00001,ko03000 Helix-turn-helix XRE-family like proteins
PDCPOIID_01395 1.94e-284 - - - V - - - ABC transporter transmembrane region
PDCPOIID_01396 8.98e-275 - - - S - - - nuclear-transcribed mRNA catabolic process, no-go decay
PDCPOIID_01397 1.39e-101 - - - S - - - NUDIX domain
PDCPOIID_01398 1.91e-56 - - - - - - - -
PDCPOIID_01399 4.91e-115 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
PDCPOIID_01400 5.54e-91 - - - - - - - -
PDCPOIID_01401 3.66e-67 - - - - - - - -
PDCPOIID_01402 1.35e-129 - - - - - - - -
PDCPOIID_01403 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PDCPOIID_01404 0.0 xfp 4.1.2.22, 4.1.2.9 - G ko:K01621 ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120 ko00000,ko00001,ko01000 Phosphoketolase
PDCPOIID_01406 0.0 bmr3 - - EGP - - - Major Facilitator
PDCPOIID_01407 4.77e-130 yobS - - K - - - Bacterial regulatory proteins, tetR family
PDCPOIID_01408 1.85e-198 p75 - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC P60 family protein
PDCPOIID_01409 3.82e-167 deoD 2.4.2.1 - F ko:K03784 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 Purine nucleoside phosphorylase
PDCPOIID_01410 1.08e-291 deoB 5.4.2.7 - G ko:K01839 ko00030,ko00230,map00030,map00230 ko00000,ko00001,ko01000 Phosphotransfer between the C1 and C5 carbon atoms of pentose
PDCPOIID_01411 4.12e-149 deoC 4.1.2.4 - F ko:K01619 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PDCPOIID_01412 4.1e-152 - - - G - - - Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PDCPOIID_01413 2.64e-302 pts14C - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDCPOIID_01414 8.86e-213 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
PDCPOIID_01415 3.89e-158 livF - - E ko:K01996 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter
PDCPOIID_01416 3.37e-177 livG - - E ko:K01995 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Branched-chain amino acid ATP-binding cassette transporter
PDCPOIID_01417 7.41e-181 livM - - E ko:K01997,ko:K01998 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Branched-chain amino acid transport system / permease component
PDCPOIID_01418 1.21e-190 livH - - U ko:K01997 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Branched-chain amino acid transport system / permease component
PDCPOIID_01419 3.43e-181 livJ - - E ko:K01999 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Receptor family ligand binding region
PDCPOIID_01420 5.04e-44 livJ - - E ko:K01999 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Receptor family ligand binding region
PDCPOIID_01421 2.51e-98 - - - S - - - Threonine/Serine exporter, ThrE
PDCPOIID_01422 2.56e-175 - - - S - - - Putative threonine/serine exporter
PDCPOIID_01423 4.3e-71 trxA - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Belongs to the thioredoxin family
PDCPOIID_01424 0.0 - - - M - - - domain protein
PDCPOIID_01425 0.0 - - - M - - - domain protein
PDCPOIID_01426 4.36e-224 - - - M - - - domain protein
PDCPOIID_01427 1.11e-92 rpsL - - J ko:K02950 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PDCPOIID_01428 2.06e-108 rpsG - - J ko:K02992 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PDCPOIID_01429 0.0 fusA - - J ko:K02355 - ko00000,ko03012,ko03029 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PDCPOIID_01430 1.44e-256 - - - K - - - WYL domain
PDCPOIID_01431 6.83e-138 ahpC 1.11.1.15 - O ko:K03386 ko04214,map04214 ko00000,ko00001,ko01000,ko04147 C-terminal domain of 1-Cys peroxiredoxin
PDCPOIID_01432 3.63e-90 psiE - - S ko:K13256 - ko00000 Phosphate-starvation-inducible E
PDCPOIID_01433 4.46e-66 rpsJ - - J ko:K02946 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Involved in the binding of tRNA to the ribosomes
PDCPOIID_01434 4.68e-145 rplC - - J ko:K02906 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PDCPOIID_01435 1.98e-140 rplD - - J ko:K02926 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the polypeptide exit tunnel
PDCPOIID_01436 1.02e-61 rplW - - J ko:K02892 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PDCPOIID_01437 7.23e-201 rplB - - J ko:K02886 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PDCPOIID_01438 5.26e-63 rpsS - - J ko:K02965 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PDCPOIID_01439 4.5e-73 rplV - - J ko:K02890 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PDCPOIID_01440 6.88e-152 rpsC - - J ko:K02982 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PDCPOIID_01441 1.38e-98 rplP - - J ko:K02878 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PDCPOIID_01442 3.55e-33 rpmC - - J ko:K02904 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uL29 family
PDCPOIID_01443 5.93e-55 rpsQ - - J ko:K02961 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PDCPOIID_01444 1.73e-77 rplN - - J ko:K02874 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PDCPOIID_01445 4.1e-67 rplX - - J ko:K02895 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PDCPOIID_01446 8.67e-124 rplE - - J ko:K02931 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PDCPOIID_01447 4.78e-35 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PDCPOIID_01448 1.32e-88 rpsH - - J ko:K02994 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PDCPOIID_01449 2.61e-123 rplF - - J ko:K02933 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PDCPOIID_01450 1.62e-76 rplR - - J ko:K02881 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PDCPOIID_01451 5.74e-109 rpsE - - J ko:K02988 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PDCPOIID_01452 2.6e-33 rpmD - - J ko:K02907 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L30
PDCPOIID_01453 4.07e-92 rplO - - J ko:K02876 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
PDCPOIID_01454 2.01e-303 secY - - U ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PDCPOIID_01455 1.29e-155 adk 2.7.4.3 - F ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PDCPOIID_01456 4.15e-46 infA - - J ko:K02518 - ko00000,ko03012 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PDCPOIID_01457 6.38e-20 rpmJ - - J ko:K02919 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL36 family
PDCPOIID_01458 5.37e-76 rpsM - - J ko:K02952 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PDCPOIID_01459 3.82e-82 rpsK - - J ko:K02948 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PDCPOIID_01460 1.26e-218 rpoA 2.7.7.6 - K ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDCPOIID_01461 5.46e-81 rplQ - - J ko:K02879 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L17
PDCPOIID_01462 8.3e-150 - - - - - - - -
PDCPOIID_01463 7.77e-196 ecfA1 - - P ko:K16786 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDCPOIID_01464 1.92e-202 ecfA2 - - P ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDCPOIID_01465 1.13e-181 ecfT - - U ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDCPOIID_01466 1.39e-178 truA 5.4.99.12 - J ko:K06173 - ko00000,ko01000,ko03016 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PDCPOIID_01467 3.78e-170 tipA - - K - - - TipAS antibiotic-recognition domain
PDCPOIID_01468 1.5e-44 - - - - - - - -
PDCPOIID_01469 7.4e-164 lolD - - V ko:K02003 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
PDCPOIID_01470 3.55e-236 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
PDCPOIID_01471 5.95e-140 - - - K - - - Bacterial regulatory proteins, tetR family
PDCPOIID_01472 2.98e-104 rplM - - J ko:K02871 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PDCPOIID_01473 8.98e-86 rpsI - - J ko:K02996 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS9 family
PDCPOIID_01474 2.42e-70 - - - - - - - -
PDCPOIID_01475 4.79e-107 - - - - - - - -
PDCPOIID_01476 1.28e-12 - - - S - - - Protein of unknown function (DUF2785)
PDCPOIID_01477 1.6e-121 - - - S - - - Protein of unknown function (DUF2785)
PDCPOIID_01478 2.47e-169 - - - S ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
PDCPOIID_01479 3.49e-172 XK27_06945 - - S ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
PDCPOIID_01480 2.65e-173 XK27_06950 - - S ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
PDCPOIID_01481 5.66e-190 ssuC - - U ko:K15554 ko00920,ko02010,map00920,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PDCPOIID_01482 1.17e-154 ssuB - - P ko:K15555 ko00920,ko02010,map00920,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
PDCPOIID_01483 1.06e-296 - - - I - - - Acyltransferase family
PDCPOIID_01484 0.0 - 6.2.1.48 - IQ ko:K02182 - ko00000,ko01000 AMP-binding enzyme C-terminal domain
PDCPOIID_01485 4.92e-221 ssuA - - P ko:K02051,ko:K15553 ko00920,ko02010,map00920,map02010 ko00000,ko00001,ko00002,ko02000 NMT1-like family
PDCPOIID_01486 0.0 - - - L ko:K07484 - ko00000 Transposase IS66 family
PDCPOIID_01487 6.37e-82 - - - L ko:K07484 - ko00000 IS66 Orf2 like protein
PDCPOIID_01488 2.58e-37 - - - - - - - -
PDCPOIID_01489 3.52e-176 dapB 1.17.1.8 - E ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PDCPOIID_01490 6.02e-216 dapA 4.3.3.7 - E ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PDCPOIID_01491 1.83e-281 hipO 3.5.1.47 - E ko:K05823 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PDCPOIID_01492 1.26e-115 dapH 2.3.1.117, 2.3.1.89 - E ko:K00674,ko:K05822 ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PDCPOIID_01493 0.0 lysA 4.1.1.20 - E ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PDCPOIID_01494 0.0 lysC 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the aspartokinase family
PDCPOIID_01495 1.46e-240 dapF 5.1.1.7 - E ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PDCPOIID_01496 9.67e-250 asd 1.2.1.11 - E ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PDCPOIID_01497 8.13e-82 - - - - - - - -
PDCPOIID_01498 1.35e-97 - - - L - - - NUDIX domain
PDCPOIID_01499 1.68e-25 - - - EG - - - EamA-like transporter family
PDCPOIID_01500 9.64e-135 - - - EG - - - EamA-like transporter family
PDCPOIID_01501 9.81e-280 - - - F ko:K10974 - ko00000,ko02000 Permease for cytosine/purines, uracil, thiamine, allantoin
PDCPOIID_01502 1.98e-258 - - - S ko:K09703 - ko00000 Protein of unknown function (DUF917)
PDCPOIID_01503 0.0 hyuA - - EQ - - - Hydantoinase/oxoprolinase N-terminal region
PDCPOIID_01504 6.84e-186 frlD1 2.7.1.218 - G ko:K10710 - ko00000,ko01000 pfkB family carbohydrate kinase
PDCPOIID_01505 1.32e-76 - - - S - - - WxL domain surface cell wall-binding
PDCPOIID_01506 7.21e-102 - - - - - - - -
PDCPOIID_01507 0.0 - 3.1.11.5 - L ko:K03581 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Helix-hairpin-helix containing domain
PDCPOIID_01508 1.19e-175 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2087)
PDCPOIID_01509 5.44e-176 XK27_08125 - - S ko:K09861 - ko00000 Belongs to the UPF0246 family
PDCPOIID_01510 0.0 galA 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 alpha-galactosidase
PDCPOIID_01511 3.71e-113 - - - EGP - - - Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PDCPOIID_01512 3.29e-234 - - - GM ko:K19426 - ko00000,ko01000 Polysaccharide pyruvyl transferase
PDCPOIID_01513 8.95e-273 - - - G - - - Transporter, major facilitator family protein
PDCPOIID_01514 0.0 menE 6.2.1.26 - H ko:K01911 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
PDCPOIID_01515 4.03e-200 menB 4.1.3.36 - H ko:K01661 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PDCPOIID_01516 3.41e-68 yuxO - - Q - - - Thioesterase superfamily
PDCPOIID_01517 0.0 dld 1.1.5.12 - C ko:K03777 ko00620,ko01120,map00620,map01120 ko00000,ko00001,ko01000 D-lactate dehydrogenase, membrane binding
PDCPOIID_01518 1.48e-219 glyQ 6.1.1.14 - J ko:K01878 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 glycyl-tRNA synthetase alpha subunit
PDCPOIID_01519 0.0 glyS 6.1.1.14 - J ko:K01879 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Glycyl-tRNA synthetase beta subunit
PDCPOIID_01520 0.0 dnaG - - L ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PDCPOIID_01521 9.19e-249 sigA - - K ko:K03086 - ko00000,ko03021 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PDCPOIID_01522 2.29e-160 trmK 2.1.1.217 - S ko:K06967 - ko00000,ko01000,ko03016 SAM-dependent methyltransferase
PDCPOIID_01523 4.01e-191 yqfO - - S - - - Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PDCPOIID_01524 2.03e-35 dmpI 5.3.2.6 - G ko:K01821 ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220 ko00000,ko00001,ko00002,ko01000 Belongs to the 4-oxalocrotonate tautomerase family
PDCPOIID_01525 2.32e-79 yitW - - S - - - Iron-sulfur cluster assembly protein
PDCPOIID_01526 1.06e-182 - - - - - - - -
PDCPOIID_01527 4.61e-224 - - - - - - - -
PDCPOIID_01528 0.0 rsmF - - J - - - NOL1 NOP2 sun family protein
PDCPOIID_01529 4.56e-244 fni 5.3.3.2 - C ko:K01823 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PDCPOIID_01530 3.82e-231 mvaD 4.1.1.33 - I ko:K01597 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 diphosphomevalonate decarboxylase
PDCPOIID_01531 1.31e-215 mvk 2.7.1.36 - I ko:K00869 ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146 ko00000,ko00001,ko00002,ko01000 mevalonate kinase
PDCPOIID_01532 0.0 rexB 3.6.4.12 - L ko:K16899 - ko00000,ko01000,ko03400 The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PDCPOIID_01533 0.0 addA 3.6.4.12 - L ko:K16898 - ko00000,ko01000,ko03400 ATP-dependent helicase nuclease subunit A
PDCPOIID_01534 0.0 dinG 3.6.4.12 - L ko:K03722 - ko00000,ko01000,ko03400 helicase involved in DNA repair and perhaps also replication
PDCPOIID_01536 8.27e-111 ypmB - - S - - - Protein conserved in bacteria
PDCPOIID_01537 3.29e-279 aspB 2.6.1.1, 2.6.1.14 - E ko:K00812,ko:K22457 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase
PDCPOIID_01538 0.0 asnS 6.1.1.22 - J ko:K01893 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Asparaginyl-tRNA synthetase
PDCPOIID_01539 3.19e-146 dnaD - - L ko:K02086 - ko00000 DnaD domain protein
PDCPOIID_01540 1.08e-147 nth 4.2.99.18 - L ko:K10773 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PDCPOIID_01541 6e-76 comEB 3.5.4.12 - F ko:K01493 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko02044 ComE operon protein 2
PDCPOIID_01542 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M ko:K05366 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 penicillin-binding protein 1A
PDCPOIID_01543 5.12e-157 recU - - L ko:K03700 - ko00000,ko03400 Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PDCPOIID_01544 6.54e-138 ypsA - - S - - - Belongs to the UPF0398 family
PDCPOIID_01545 7.09e-88 gpsB - - D - - - Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PDCPOIID_01546 1.17e-82 yugI - - J ko:K07570 - ko00000 general stress protein
PDCPOIID_01547 2.99e-140 ppiB 5.2.1.8 - G ko:K03768 - ko00000,ko01000,ko03110 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PDCPOIID_01548 1.35e-237 yumC 1.18.1.2, 1.19.1.1 - C ko:K21567 - ko00000,ko01000 Ferredoxin--NADP reductase
PDCPOIID_01549 2.26e-115 pgpA 3.1.3.27 - I ko:K01095 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Phosphatidylglycerophosphatase A
PDCPOIID_01550 8.69e-149 dedA - - S ko:K03975 - ko00000 SNARE-like domain protein
PDCPOIID_01551 6.43e-146 - - - S - - - Protein of unknown function (DUF1461)
PDCPOIID_01552 1.34e-186 nagD 3.1.3.41 - G ko:K01101 ko00627,ko01120,map00627,map01120 ko00000,ko00001,ko01000 Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PDCPOIID_01553 1.19e-149 yutD - - S - - - Protein of unknown function (DUF1027)
PDCPOIID_01554 0.0 yunD 3.1.3.5 - F ko:K01081 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the 5'-nucleotidase family
PDCPOIID_01555 7.41e-148 - - - S - - - Calcineurin-like phosphoesterase
PDCPOIID_01556 3.27e-151 yibF - - S - - - overlaps another CDS with the same product name
PDCPOIID_01557 1.46e-241 yibE - - S - - - overlaps another CDS with the same product name
PDCPOIID_01558 9.98e-73 - - - - - - - -
PDCPOIID_01559 0.0 glpQ 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 Glycerophosphoryl diester phosphodiesterase family
PDCPOIID_01560 0.0 pepV 3.5.1.18 - E ko:K01270,ko:K01274,ko:K01439 ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000,ko01002 dipeptidase PepV
PDCPOIID_01561 2.39e-176 birA 6.3.4.15 - H ko:K03524 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko01000,ko03000 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PDCPOIID_01562 3.02e-100 yfnB 3.8.1.2 - S ko:K01560,ko:K07025 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 HAD-hyrolase-like
PDCPOIID_01563 0.0 pbp1B 2.4.1.129 GT51 M ko:K03693,ko:K12551 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 Penicillin binding protein transpeptidase domain
PDCPOIID_01564 3.03e-232 ccpA - - K ko:K02529 - ko00000,ko03000 catabolite control protein A
PDCPOIID_01565 7.34e-273 pepQ 3.4.13.9 - E ko:K01271 - ko00000,ko01000,ko01002 Creatinase/Prolidase N-terminal domain
PDCPOIID_01566 7.49e-117 yrxA - - S ko:K07105 - ko00000 3H domain
PDCPOIID_01567 1.39e-113 ytxH - - S - - - YtxH-like protein
PDCPOIID_01568 2.12e-46 ytxG - - S - - - protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PDCPOIID_01569 1.14e-196 ykuT - - M ko:K16052,ko:K22044 - ko00000,ko02000 mechanosensitive ion channel
PDCPOIID_01570 1.62e-199 - - - S ko:K08974 - ko00000 Domain of unknown function (DUF368)
PDCPOIID_01571 9.32e-112 ykuL - - S - - - CBS domain
PDCPOIID_01572 1.9e-175 gla - - U ko:K02440 - ko00000,ko02000 Major intrinsic protein
PDCPOIID_01573 1.64e-125 ysnB - - S ko:K07095 - ko00000 Phosphoesterase
PDCPOIID_01574 0.0 murI 3.6.1.66, 5.1.1.3 - M ko:K01776,ko:K02428 ko00230,ko00471,ko01100,map00230,map00471,map01100 ko00000,ko00001,ko01000,ko01011 Provides the (R)-glutamate required for cell wall biosynthesis
PDCPOIID_01575 6.77e-111 yslB - - S - - - Protein of unknown function (DUF2507)
PDCPOIID_01576 8.29e-312 dltD - - M ko:K03740 ko01503,ko02020,ko05150,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01504 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PDCPOIID_01577 6.97e-49 dltC 6.1.1.13 - J ko:K14188 ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01000,ko01504 Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PDCPOIID_01578 9.86e-304 dltB - - M ko:K03739 ko01503,ko02020,ko05150,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01504 MBOAT, membrane-bound O-acyltransferase family
PDCPOIID_01579 0.0 dltA 6.1.1.13 - H ko:K03367 ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01000,ko01504 Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PDCPOIID_01580 1.04e-27 dltX - - S - - - D-Ala-teichoic acid biosynthesis protein
PDCPOIID_01581 3.64e-70 trxA - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Belongs to the thioredoxin family
PDCPOIID_01582 0.0 mutS2 - - L ko:K07456 ko03430,map03430 ko00000,ko00001,ko03400 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PDCPOIID_01583 3.14e-118 cvpA - - S - - - Colicin V production protein
PDCPOIID_01584 2.84e-48 - - - D ko:K09888 - ko00000,ko03036 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PDCPOIID_01585 1.3e-69 yrzB - - S - - - Belongs to the UPF0473 family
PDCPOIID_01586 7.66e-96 yrrK - - J ko:K07447 - ko00000,ko01000 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PDCPOIID_01587 4.89e-58 yrzL - - S - - - Belongs to the UPF0297 family
PDCPOIID_01589 0.0 alaS 6.1.1.7 - J ko:K01872 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PDCPOIID_01590 1.55e-223 - - - - - - - -
PDCPOIID_01591 0.0 cshB 3.6.4.13 - JKL ko:K05592,ko:K18692 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PDCPOIID_01592 3.03e-229 nrnA 3.1.13.3, 3.1.3.7 - S ko:K06881 ko00920,ko01100,ko01120,map00920,map01100,map01120 ko00000,ko00001,ko01000,ko03400 DHHA1 domain protein
PDCPOIID_01593 1.13e-307 ytoI - - K - - - DRTGG domain
PDCPOIID_01594 7.25e-264 dinB 2.7.7.7 - L ko:K02346 - ko00000,ko01000,ko03400 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PDCPOIID_01595 0.0 zwf 1.1.1.363, 1.1.1.49 - G ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PDCPOIID_01596 2.06e-150 mntR - - K ko:K03709 - ko00000,ko03000 Helix-turn-helix diphteria tox regulatory element
PDCPOIID_01597 0.0 adhE 1.1.1.1, 1.2.1.10 - C ko:K04072 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 belongs to the iron- containing alcohol dehydrogenase family
PDCPOIID_01598 1.83e-87 yajC - - U ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase
PDCPOIID_01599 3.46e-289 tgt 2.4.2.29 - F ko:K00773 - ko00000,ko01000,ko03016 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PDCPOIID_01600 1.52e-262 queA 2.4.99.17 - J ko:K07568 - ko00000,ko01000,ko03016 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PDCPOIID_01601 1.59e-241 ruvB 3.6.4.12 - L ko:K03551 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PDCPOIID_01602 2.95e-133 ruvA 3.6.4.12 - L ko:K03550 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PDCPOIID_01603 1.3e-136 yjbF - - S - - - SNARE associated Golgi protein
PDCPOIID_01604 1.69e-112 luxS 4.4.1.21 - H ko:K07173 ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111 ko00000,ko00001,ko00002,ko01000 Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PDCPOIID_01605 4.87e-283 metE 2.1.1.14 - E ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 methionine synthase, vitamin-B12 independent
PDCPOIID_01607 4.49e-97 - - - S - - - Protein of unknown function (DUF3290)
PDCPOIID_01608 3.16e-151 yviA - - S - - - Protein of unknown function (DUF421)
PDCPOIID_01609 6.16e-199 - - - S - - - Alpha beta hydrolase
PDCPOIID_01610 6.77e-201 - - - - - - - -
PDCPOIID_01611 2.94e-198 dkgB - - S - - - reductase
PDCPOIID_01612 3.83e-109 nrdI - - F ko:K03647 - ko00000 Belongs to the NrdI family
PDCPOIID_01613 2.81e-230 ybcH - - D ko:K06889 - ko00000 Alpha beta
PDCPOIID_01614 6.42e-101 - - - K - - - Transcriptional regulator
PDCPOIID_01615 7.46e-157 XK27_05175 3.1.3.18 - S ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 ko00000,ko00001,ko01000 haloacid dehalogenase-like hydrolase
PDCPOIID_01616 1.61e-255 napA - - P - - - Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PDCPOIID_01617 4.89e-122 - - - J - - - COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PDCPOIID_01618 1.69e-58 - - - - - - - -
PDCPOIID_01619 1.28e-229 - 3.4.11.5 - I ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 carboxylic ester hydrolase activity
PDCPOIID_01620 0.0 yfgQ - - P ko:K12952 - ko00000,ko01000 E1-E2 ATPase
PDCPOIID_01621 4.06e-107 ndk 2.7.4.6 - F ko:K00940 ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016 ko00000,ko00001,ko00002,ko01000,ko04131 Belongs to the NDK family
PDCPOIID_01622 1.55e-169 - - - IQ - - - Belongs to the short-chain dehydrogenases reductases (SDR) family
PDCPOIID_01623 0.0 prfC - - J ko:K02837 - ko00000,ko03012 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PDCPOIID_01624 4.82e-310 hlyX - - S ko:K03699 - ko00000,ko02042 Transporter associated domain
PDCPOIID_01625 4.17e-262 yueF - - S - - - AI-2E family transporter
PDCPOIID_01626 4.61e-97 yjcF - - S - - - Acetyltransferase (GNAT) domain
PDCPOIID_01627 1.11e-122 - - - - - - - -
PDCPOIID_01628 1.1e-134 ygaC - - J ko:K07586 - ko00000 Belongs to the UPF0374 family
PDCPOIID_01629 3.25e-181 recX - - S ko:K03565 - ko00000,ko03400 Regulatory protein RecX
PDCPOIID_01630 0.0 frvR - - K ko:K02538,ko:K03483,ko:K09685,ko:K18531 - ko00000,ko03000 transcriptional antiterminator
PDCPOIID_01631 6.46e-83 - - - - - - - -
PDCPOIID_01632 0.0 rumA_1 2.1.1.190, 2.1.1.35 - J ko:K00557,ko:K03215 - ko00000,ko01000,ko03009,ko03016 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PDCPOIID_01633 1.68e-103 - - - F - - - Nucleoside 2-deoxyribosyltransferase
PDCPOIID_01634 2.13e-172 - - - K ko:K03489 - ko00000,ko03000 UTRA
PDCPOIID_01635 0.0 bglA 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PDCPOIID_01636 0.0 celD - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDCPOIID_01637 2.36e-111 - - - - - - - -
PDCPOIID_01638 5.55e-66 celC 2.7.1.196, 2.7.1.205 - G ko:K02759 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIA subunit
PDCPOIID_01639 6.27e-67 ptcB 2.7.1.196, 2.7.1.205 - G ko:K02760 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
PDCPOIID_01640 0.0 poxL 1.2.3.3 - EH ko:K00158 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000 Belongs to the TPP enzyme family
PDCPOIID_01641 5.25e-279 mvaS 2.3.3.10 - I ko:K01641 ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Hydroxymethylglutaryl-CoA synthase
PDCPOIID_01642 4.66e-267 mvaA 1.1.1.88, 2.3.1.9 - C ko:K00054,ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the HMG-CoA reductase family
PDCPOIID_01643 2.84e-265 atoB 1.1.1.88, 2.3.1.9 - I ko:K00054,ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the thiolase family
PDCPOIID_01644 7.23e-66 - - - - - - - -
PDCPOIID_01645 9.55e-205 - - - G - - - Xylose isomerase domain protein TIM barrel
PDCPOIID_01646 4.27e-132 - - - V ko:K07448 - ko00000,ko02048 Restriction endonuclease
PDCPOIID_01647 4.35e-199 - 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 converts alpha-aldose to the beta-anomer
PDCPOIID_01648 3.11e-271 - 3.5.1.18 - E ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 succinyl-diaminopimelate desuccinylase
PDCPOIID_01649 4.33e-132 - - - S - - - ECF transporter, substrate-specific component
PDCPOIID_01651 0.0 - - - S - - - Glucosyl transferase GtrII
PDCPOIID_01652 4.77e-208 nodB3 - - G - - - Polysaccharide deacetylase
PDCPOIID_01653 4.57e-304 hflX - - S ko:K03665 - ko00000,ko03009 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PDCPOIID_01654 2.01e-210 - - - I - - - Diacylglycerol kinase catalytic domain
PDCPOIID_01655 0.0 - - - E - - - Amino Acid
PDCPOIID_01656 2.68e-174 cysA - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PDCPOIID_01657 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
PDCPOIID_01658 4.03e-164 gpm2 - - G - - - Phosphoglycerate mutase family
PDCPOIID_01659 2.24e-237 hemH 4.99.1.1, 4.99.1.9 - H ko:K01772 ko00860,ko01100,ko01110,map00860,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the ferrous insertion into protoporphyrin IX
PDCPOIID_01660 2.56e-306 mntH - - P ko:K03322 - ko00000,ko02000 H( )-stimulated, divalent metal cation uptake system
PDCPOIID_01661 9.58e-105 yjhE - - S - - - Phage tail protein
PDCPOIID_01662 1.97e-230 pepR 3.4.11.5 - E ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 Releases the N-terminal proline from various substrates
PDCPOIID_01663 0.0 yjbQ - - P ko:K03455,ko:K03499 - ko00000,ko02000 TrkA C-terminal domain protein
PDCPOIID_01664 4.33e-29 - - - - - - - -
PDCPOIID_01666 0.0 helD 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
PDCPOIID_01667 2.05e-109 ykhA 3.1.2.20 - I ko:K01073 - ko00000,ko01000 Thioesterase superfamily
PDCPOIID_01668 0.0 pepDA - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
PDCPOIID_01669 3.38e-56 - - - - - - - -
PDCPOIID_01671 8.03e-229 coaA 2.7.1.33 - F ko:K00867 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Pantothenic acid kinase
PDCPOIID_01672 0.0 guaA 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the synthesis of GMP from XMP
PDCPOIID_01673 1.88e-57 - - - L - - - Reverse transcriptase (RNA-dependent DNA polymerase)
PDCPOIID_01675 1.38e-97 - - - O - - - OsmC-like protein
PDCPOIID_01676 1.03e-242 dhaK 2.7.1.121 - G ko:K05878 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Dak1 domain
PDCPOIID_01677 2.35e-132 dhaL 2.7.1.121 - S ko:K05879 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Dak2
PDCPOIID_01678 2.1e-78 dhaM 2.7.1.121 - S ko:K05881 ko00561,map00561 ko00000,ko00001,ko01000,ko02000 PTS system fructose IIA component
PDCPOIID_01679 2.03e-130 - - - K - - - Bacterial regulatory proteins, tetR family
PDCPOIID_01680 7.24e-23 - - - - - - - -
PDCPOIID_01681 0.0 l1n 4.2.1.53 - S ko:K10254 - ko00000,ko01000 Myosin-crossreactive antigen
PDCPOIID_01682 1.75e-105 - - - - - - - -
PDCPOIID_01683 5.84e-253 - 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolases, choloylglycine hydrolase family
PDCPOIID_01684 1.29e-199 metQ1 - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the nlpA lipoprotein family
PDCPOIID_01685 0.0 pip - - V ko:K01421 - ko00000 domain protein
PDCPOIID_01687 2.46e-254 - - - V ko:K06147,ko:K06148 - ko00000,ko02000 ABC transporter transmembrane region
PDCPOIID_01688 0.0 - - - L - - - Transposase DDE domain
PDCPOIID_01689 2.48e-149 - - - L ko:K07459 - ko00000 ATP-dependent endonuclease of the OLD
PDCPOIID_01690 1.95e-90 - 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase activity
PDCPOIID_01691 0.0 hsdR 3.1.21.3 - V ko:K01153 - ko00000,ko01000,ko02048 Subunit R is required for both nuclease and ATPase activities, but not for modification
PDCPOIID_01692 0.0 hsdM 2.1.1.72 - V ko:K03427 - ko00000,ko01000,ko02048 type I restriction-modification system
PDCPOIID_01693 7.25e-177 - 3.1.21.3 - V ko:K01154 - ko00000,ko01000,ko02048 Type I restriction modification DNA specificity domain
PDCPOIID_01694 9.32e-40 - - - - - - - -
PDCPOIID_01695 7.88e-121 traP 1.14.99.57, 6.2.1.3 - S ko:K01897,ko:K21481 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 heme oxygenase (decyclizing) activity
PDCPOIID_01696 3.28e-176 yhfI - - S - - - Metallo-beta-lactamase superfamily
PDCPOIID_01697 1.13e-89 spxA - - K ko:K16509 - ko00000 Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PDCPOIID_01698 1.44e-157 mecA - - NOT ko:K16511 - ko00000 Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PDCPOIID_01699 0.0 glpQ4 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 phosphodiesterase
PDCPOIID_01700 3.67e-227 pyrD 1.3.5.2, 1.3.98.1 - F ko:K00226,ko:K00254 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of dihydroorotate to orotate
PDCPOIID_01701 1.16e-31 - - - - - - - -
PDCPOIID_01702 1.97e-88 - - - - - - - -
PDCPOIID_01704 0.0 argS 6.1.1.19 - J ko:K01887 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Arginyl-tRNA synthetase
PDCPOIID_01705 3.31e-98 argR1 - - K ko:K03402 - ko00000,ko03000 Regulates arginine biosynthesis genes
PDCPOIID_01706 5.27e-198 rluA 5.4.99.23, 5.4.99.28, 5.4.99.29 - J ko:K06177,ko:K06180 - ko00000,ko01000,ko03009,ko03016 Responsible for synthesis of pseudouridine from uracil
PDCPOIID_01707 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M ko:K12555 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 penicillin-binding protein
PDCPOIID_01708 1.03e-72 - - - S - - - Control of competence regulator ComK, YlbF/YmcA
PDCPOIID_01709 8.42e-232 yhaM - - S ko:K03698 - ko00000,ko01000,ko03019 Metal dependent phosphohydrolases with conserved 'HD' motif.
PDCPOIID_01710 5.26e-205 prsA 5.2.1.8 - M ko:K07533 - ko00000,ko01000,ko03110 Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PDCPOIID_01711 5.77e-81 - - - S - - - YtxH-like protein
PDCPOIID_01712 1.96e-98 hit - - FG ko:K02503 - ko00000,ko04147 histidine triad
PDCPOIID_01713 2.4e-172 ecsA - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PDCPOIID_01714 1.01e-275 ecsB - - U ko:K01992 - ko00000,ko00002,ko02000 ABC transporter
PDCPOIID_01715 4.51e-189 ytmP - - M - - - Choline/ethanolamine kinase
PDCPOIID_01716 1.35e-155 trmB 2.1.1.33 - J ko:K03439 - ko00000,ko01000,ko03016 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PDCPOIID_01717 3.03e-06 - - - S - - - Small secreted protein
PDCPOIID_01718 5.32e-73 ytpP - - CO - - - Thioredoxin
PDCPOIID_01719 3.17e-149 XK27_10290 - - J ko:K06878 - ko00000 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PDCPOIID_01720 0.0 sftA - - D ko:K03466 - ko00000,ko03036 Belongs to the FtsK SpoIIIE SftA family
PDCPOIID_01721 0.0 murC 6.3.2.8 - M ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Belongs to the MurCDEF family
PDCPOIID_01722 2.55e-155 ybhL - - S ko:K06890 - ko00000 Inhibitor of apoptosis-promoting Bax1
PDCPOIID_01723 0.0 polA 2.7.7.7 - L ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 ko00000,ko00001,ko01000,ko03032,ko03400 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PDCPOIID_01724 2.52e-203 fpg 3.2.2.23, 4.2.99.18 - L ko:K10563 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PDCPOIID_01725 7.76e-130 coaE 2.7.1.24 - F ko:K00859 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PDCPOIID_01726 2.06e-103 nrdR - - K ko:K07738 - ko00000,ko03000 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PDCPOIID_01727 1.04e-303 dnaB - - L ko:K03346 - ko00000,ko03032 replication initiation and membrane attachment
PDCPOIID_01728 1.02e-180 dnaI - - L ko:K11144 - ko00000,ko03032 Primosomal protein DnaI
PDCPOIID_01730 0.0 thrS 6.1.1.3 - J ko:K01868 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PDCPOIID_01731 1.17e-130 yrgI 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Histidine phosphatase superfamily (branch 1)
PDCPOIID_01732 5.3e-70 - - - - - - - -
PDCPOIID_01733 2.7e-166 - - - S - - - SseB protein N-terminal domain
PDCPOIID_01734 7.46e-101 infC - - J ko:K02520 - ko00000,ko03012,ko03029 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PDCPOIID_01735 1.13e-36 rpmI - - J ko:K02916 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL35 family
PDCPOIID_01736 1.02e-74 rplT - - J ko:K02887 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PDCPOIID_01737 8.27e-130 - 3.2.2.10 - S ko:K06966 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the LOG family
PDCPOIID_01738 7.15e-230 - - - C - - - Alcohol dehydrogenase GroES-like domain
PDCPOIID_01739 4.31e-157 mhqD - - S ko:K06999 - ko00000 Dienelactone hydrolase family
PDCPOIID_01740 2.74e-243 mhqA_2 - - E ko:K15975 - ko00000 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PDCPOIID_01741 2.28e-219 ykcA - - E - - - Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PDCPOIID_01742 6.63e-127 yqeG - - S ko:K07015 - ko00000 HAD phosphatase, family IIIA
PDCPOIID_01743 3.02e-262 yqeH - - S ko:K06948 - ko00000,ko03009 Ribosome biogenesis GTPase YqeH
PDCPOIID_01744 1.88e-63 yhbY - - J ko:K07574 - ko00000,ko03009 RNA-binding protein
PDCPOIID_01745 2.72e-157 nadD 2.7.7.18 - H ko:K00969 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PDCPOIID_01746 3.21e-142 yqeK - - H - - - Hydrolase, HD family
PDCPOIID_01747 1.18e-78 rsfS - - J ko:K09710 - ko00000,ko03009 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PDCPOIID_01748 8.06e-177 yccK - - Q - - - ubiE/COQ5 methyltransferase family
PDCPOIID_01749 2.27e-268 ylbM - - S - - - Belongs to the UPF0348 family
PDCPOIID_01750 3.14e-127 ylbN - - S ko:K07040 - ko00000 Uncharacterized ACR, COG1399
PDCPOIID_01751 0.0 gnd 1.1.1.343, 1.1.1.44 - H ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PDCPOIID_01752 1.01e-157 csrR - - K - - - response regulator
PDCPOIID_01753 0.0 arlS 2.7.13.3 - T ko:K18940 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
PDCPOIID_01754 8.99e-229 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PDCPOIID_01755 4.17e-60 acyP 3.6.1.7 - C ko:K01512 ko00620,ko00627,ko01120,map00620,map00627,map01120 ko00000,ko00001,ko01000 Belongs to the acylphosphatase family
PDCPOIID_01756 4.47e-178 spoU - - J ko:K03437 - ko00000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDCPOIID_01757 3.09e-122 XK27_09705 - - S ko:K06950 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
PDCPOIID_01758 1.2e-87 yodB - - K - - - Transcriptional regulator, HxlR family
PDCPOIID_01759 3.55e-259 pheS 6.1.1.20 - J ko:K01889 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PDCPOIID_01760 0.0 pheT 6.1.1.20 - J ko:K01890 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PDCPOIID_01761 5.31e-265 mltG - - S ko:K07082 - ko00000 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PDCPOIID_01762 3.43e-148 udk 2.7.1.48 - F ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 Cytidine monophosphokinase
PDCPOIID_01763 1.05e-101 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PDCPOIID_01764 3.14e-164 yvqF - - S ko:K11622 ko02020,map02020 ko00000,ko00001 Cell wall-active antibiotics response 4TMS YvqF
PDCPOIID_01765 1.33e-231 vraS 2.7.13.3 - T ko:K07681,ko:K11617 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
PDCPOIID_01766 2.04e-149 vraR - - K ko:K07694,ko:K11618 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 helix_turn_helix, Lux Regulon
PDCPOIID_01767 8.3e-70 yneR - - S - - - Belongs to the HesB IscA family
PDCPOIID_01768 0.0 - - - S - - - Bacterial membrane protein YfhO
PDCPOIID_01769 0.0 pbp2b - - M ko:K00687,ko:K12553,ko:K21465,ko:K21466 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011 Penicillin-binding Protein
PDCPOIID_01770 1.33e-157 gluP 3.4.21.105 - S ko:K19225 - ko00000,ko01000,ko01002 Peptidase, S54 family
PDCPOIID_01771 6.79e-55 yqgQ - - S - - - Bacterial protein of unknown function (DUF910)
PDCPOIID_01772 1.13e-228 glcK 2.7.1.2 - G ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Glucokinase
PDCPOIID_01773 1.93e-96 yqhL - - P - - - Rhodanese-like protein
PDCPOIID_01774 3.33e-35 WQ51_02665 - - S - - - Protein of unknown function (DUF3042)
PDCPOIID_01775 1.48e-220 miaA 2.5.1.75 - F ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 ko00000,ko00001,ko01000,ko01006,ko03016 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PDCPOIID_01776 1.36e-303 ynbB - - P - - - aluminum resistance
PDCPOIID_01777 0.0 speA 4.1.1.17, 4.1.1.18, 4.1.1.19 - E ko:K01581,ko:K01582,ko:K01585 ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Orn/Lys/Arg decarboxylase, C-terminal domain
PDCPOIID_01778 1.32e-80 glnR - - K ko:K03713,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000,ko03000 Transcriptional regulator
PDCPOIID_01779 0.0 glnA 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 glutamine synthetase
PDCPOIID_01780 0.0 pepX 3.4.14.11 - E ko:K01281 - ko00000,ko01000,ko01002 Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PDCPOIID_01782 1.73e-39 - - - - - - - -
PDCPOIID_01783 1.17e-16 - - - - - - - -
PDCPOIID_01784 5.83e-67 rplU - - J ko:K02888 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to 23S rRNA in the presence of protein L20
PDCPOIID_01785 1.77e-74 ysxB - - J ko:K07584 - ko00000 Cysteine protease Prp
PDCPOIID_01786 1.6e-63 rpmA - - J ko:K02899 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL27 family
PDCPOIID_01787 5.05e-258 pepP 3.4.11.9, 3.4.13.9 - E ko:K01262,ko:K01271 - ko00000,ko01000,ko01002 Creatinase/Prolidase N-terminal domain
PDCPOIID_01788 6.06e-132 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PDCPOIID_01789 9.44e-99 WQ51_04310 - - S ko:K10947 - ko00000,ko03000 Asp23 family, cell envelope-related function
PDCPOIID_01790 6.72e-88 nusB - - K ko:K03625 - ko00000,ko03009,ko03021 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PDCPOIID_01791 7.39e-192 folD 1.5.1.5, 3.5.4.9 - F ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PDCPOIID_01792 6.34e-295 xseA 3.1.11.6 - L ko:K03601 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDCPOIID_01793 1.42e-43 xseB 3.1.11.6 - L ko:K03602 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDCPOIID_01794 6.08e-188 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29 - H ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the FPP GGPP synthase family
PDCPOIID_01795 6.65e-196 rrmJ 2.1.1.226, 2.1.1.227 - J ko:K06442 - ko00000,ko01000,ko03009 Ribosomal RNA large subunit methyltransferase J
PDCPOIID_01796 4.19e-96 argR2 - - K ko:K03402 - ko00000,ko03000 Regulates arginine biosynthesis genes
PDCPOIID_01797 0.0 recN - - L ko:K03631 - ko00000,ko03400 May be involved in recombinational repair of damaged DNA
PDCPOIID_01798 2.71e-66 - - - - - - - -
PDCPOIID_01799 1.65e-117 - - - S ko:K07001 - ko00000 Patatin-like phospholipase
PDCPOIID_01800 2.52e-148 gmk 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Essential for recycling GMP and indirectly, cGMP
PDCPOIID_01801 1.77e-47 rpoZ 2.7.7.6 - K ko:K03060 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PDCPOIID_01802 1.97e-275 coaBC 4.1.1.36, 6.3.2.5 - H ko:K01598,ko:K13038 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PDCPOIID_01803 0.0 priA - - L ko:K04066 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PDCPOIID_01804 1.96e-225 fmt 2.1.2.9 - J ko:K00604 ko00670,ko00970,map00670,map00970 ko00000,ko00001,ko01000 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PDCPOIID_01805 0.0 sun 2.1.1.176 - J ko:K03500 - ko00000,ko01000,ko03009 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PDCPOIID_01806 5.22e-174 stp 3.1.3.16 - T ko:K20074 - ko00000,ko01000,ko01009 phosphatase
PDCPOIID_01807 0.0 prkC 2.7.11.1 - KLT ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 serine threonine protein kinase
PDCPOIID_01808 5.6e-221 rsgA 3.1.3.100 - S ko:K06949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PDCPOIID_01809 4.16e-151 rpe 5.1.3.1 - G ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the ribulose-phosphate 3-epimerase family
PDCPOIID_01810 2.62e-166 thiN 2.7.6.2 - H ko:K00949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 thiamine pyrophosphokinase
PDCPOIID_01811 2.29e-36 rpmB - - J ko:K02902 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL28 family
PDCPOIID_01812 5.83e-75 yloU - - S - - - Asp23 family, cell envelope-related function
PDCPOIID_01813 0.0 yloV - - S ko:K07030 - ko00000 DAK2 domain fusion protein YloV
PDCPOIID_01814 0.0 recG 3.6.4.12 - L ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PDCPOIID_01815 1.41e-241 plsX 2.3.1.15 - I ko:K03621 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PDCPOIID_01816 3.21e-49 acpP - - IQ ko:K02078 - ko00000,ko00001 Carrier of the growing fatty acid chain in fatty acid biosynthesis
PDCPOIID_01817 4.24e-247 oppD - - P ko:K02031,ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
PDCPOIID_01818 5.65e-229 oppF - - P ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
PDCPOIID_01819 3.2e-216 oppB - - P ko:K02033,ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PDCPOIID_01820 1.8e-197 oppC - - EP ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PDCPOIID_01821 0.0 oppA1 - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
PDCPOIID_01822 2.8e-161 rnc 3.1.26.3 - J ko:K03685 ko03008,ko05205,map03008,map05205 ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PDCPOIID_01823 0.0 smc - - D ko:K03529 - ko00000,ko03036 Required for chromosome condensation and partitioning
PDCPOIID_01824 2.6e-232 ftsY - - U ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PDCPOIID_01825 7.91e-70 - - - - - - - -
PDCPOIID_01827 1.26e-75 ylxM - - S ko:K09787 - ko00000 Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PDCPOIID_01828 2.16e-303 ffh 3.6.5.4 - U ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko01000,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PDCPOIID_01829 2.97e-59 rpsP - - J ko:K02959 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bS16 family
PDCPOIID_01830 1.55e-51 ylqC - - S ko:K06960 - ko00000 Belongs to the UPF0109 family
PDCPOIID_01831 2.16e-120 rimM - - J ko:K02860 - ko00000,ko03009 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PDCPOIID_01832 6.15e-186 trmD 2.1.1.228 - J ko:K00554 - ko00000,ko01000,ko03016 Belongs to the RNA methyltransferase TrmD family
PDCPOIID_01833 2e-75 rplS - - J ko:K02884 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PDCPOIID_01834 9.42e-28 - - - - - - - -
PDCPOIID_01835 2.84e-48 ynzC - - S - - - UPF0291 protein
PDCPOIID_01836 1.39e-40 yneF - - S ko:K09976 - ko00000 UPF0154 protein
PDCPOIID_01837 0.0 mdlA - - V ko:K06148,ko:K18889 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PDCPOIID_01838 0.0 mdlB - - V ko:K06147,ko:K18890 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PDCPOIID_01839 4.28e-181 yejC - - S - - - Protein of unknown function (DUF1003)
PDCPOIID_01840 1.36e-292 yhdG - - E ko:K03294 - ko00000 Amino Acid
PDCPOIID_01841 8.45e-160 plsC 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Acyltransferase
PDCPOIID_01842 1.18e-167 yabB 2.1.1.223 - L ko:K07461,ko:K15460 - ko00000,ko01000,ko03016 Methyltransferase small domain
PDCPOIID_01843 1.88e-61 yazA - - L ko:K07461 - ko00000 GIY-YIG catalytic domain protein
PDCPOIID_01844 1.18e-182 rpsB - - J ko:K02967 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS2 family
PDCPOIID_01845 1.63e-200 tsf - - J ko:K02357 - ko00000,ko03012,ko03029 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PDCPOIID_01846 5.86e-167 pyrH 2.7.4.22 - F ko:K09903 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphorylation of UMP to UDP
PDCPOIID_01847 1.73e-121 frr - - J ko:K02838 - ko00000,ko03012 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PDCPOIID_01848 3.69e-180 uppS 2.5.1.31 - H ko:K00806 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PDCPOIID_01849 7.66e-179 cdsA 2.7.7.41 - S ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 ko00000,ko00001,ko00002,ko01000 Belongs to the CDS family
PDCPOIID_01850 3.52e-292 rseP - - M ko:K11749 ko02024,ko04112,map02024,map04112 ko00000,ko00001,ko01000,ko01002 zinc metalloprotease
PDCPOIID_01851 0.0 proS 6.1.1.15 - J ko:K01881 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PDCPOIID_01852 0.0 polC 2.7.7.7 - L ko:K03763 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PDCPOIID_01853 1.33e-110 rimP - - J ko:K09748 - ko00000,ko03009 Required for maturation of 30S ribosomal subunits
PDCPOIID_01854 4.13e-277 nusA - - K ko:K02600 - ko00000,ko03009,ko03021 Participates in both transcription termination and antitermination
PDCPOIID_01855 9.63e-61 ylxR - - K ko:K07742 - ko00000 Protein of unknown function (DUF448)
PDCPOIID_01856 1.29e-60 ylxQ - - J - - - ribosomal protein
PDCPOIID_01857 0.0 infB - - J ko:K02519 - ko00000,ko03012,ko03029 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PDCPOIID_01858 1.27e-76 rbfA - - J ko:K02834 - ko00000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PDCPOIID_01860 2.07e-299 int - - L - - - Belongs to the 'phage' integrase family
PDCPOIID_01861 6.55e-57 rpmE2 - - J ko:K02909 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L31
PDCPOIID_01862 5.48e-299 murA 2.5.1.7 - M ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PDCPOIID_01863 0.0 pyrG 6.3.4.2 - F ko:K01937 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PDCPOIID_01864 3.42e-202 ybbB - - S - - - Protein of unknown function (DUF1211)
PDCPOIID_01865 1.15e-111 rpoE - - K ko:K03048 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko03021,ko03400 Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PDCPOIID_01866 3.48e-103 ywiB - - S - - - Domain of unknown function (DUF1934)
PDCPOIID_01867 2.32e-199 lipL 2.3.1.200, 2.3.1.204 - H ko:K16869,ko:K18821 - ko00000,ko01000 biotin lipoate A B protein ligase
PDCPOIID_01868 0.0 ywfO - - S ko:K06885 - ko00000 HD domain protein
PDCPOIID_01869 1.41e-103 mutT 3.6.1.55 - L ko:K03574 - ko00000,ko01000,ko03400 NUDIX domain
PDCPOIID_01870 2.14e-237 - - - S - - - DUF218 domain
PDCPOIID_01871 1.31e-77 mscL - - M ko:K03282 - ko00000,ko02000 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PDCPOIID_01872 1.51e-262 - - - Q - - - Imidazolonepropionase and related amidohydrolases
PDCPOIID_01873 1.03e-189 dapE 3.5.1.18 - E ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Peptidase dimerisation domain
PDCPOIID_01874 2.67e-244 - - - E - - - glutamate:sodium symporter activity
PDCPOIID_01875 1.54e-73 nudA - - S - - - ASCH
PDCPOIID_01876 2.2e-225 prs 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PDCPOIID_01877 5.45e-298 glmU 2.3.1.157, 2.7.7.23 - M ko:K04042 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PDCPOIID_01878 7.27e-286 ysaA - - V - - - RDD family
PDCPOIID_01879 1.01e-193 purR - - F ko:K09685 - ko00000,ko03000 pur operon repressor
PDCPOIID_01880 1.84e-154 ybbL - - S ko:K02068 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PDCPOIID_01881 1.38e-156 ybbM - - S ko:K02069 - ko00000,ko00002,ko02000 Uncharacterised protein family (UPF0014)
PDCPOIID_01882 1.99e-205 czcD - - P ko:K16264 - ko00000,ko02000 cation diffusion facilitator family transporter
PDCPOIID_01883 6.63e-232 ispE 2.7.1.148 - F ko:K00919,ko:K16924 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko02000 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PDCPOIID_01884 4.13e-51 veg - - S - - - Biofilm formation stimulator VEG
PDCPOIID_01885 2.04e-202 ksgA 2.1.1.182 - J ko:K02528 - ko00000,ko01000,ko03009 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PDCPOIID_01886 7.92e-129 rnmV 3.1.26.8 - J ko:K05985 - ko00000,ko01000 Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PDCPOIID_01887 7.48e-189 tatD - - L ko:K03424 - ko00000,ko01000 hydrolase, TatD family
PDCPOIID_01888 3e-103 manR 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 - G ko:K02538,ko:K02768,ko:K02769,ko:K02770,ko:K02773,ko:K02806,ko:K02821,ko:K03491,ko:K11201,ko:K20112 ko00051,ko00052,ko00053,ko01100,ko01120,ko02060,map00051,map00052,map00053,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000,ko03000 phosphoenolpyruvate-dependent sugar phosphotransferase system
PDCPOIID_01889 1.35e-239 lacD 4.1.2.40 - G ko:K01635 ko00052,ko01100,ko02024,map00052,map01100,map02024 ko00000,ko00001,ko01000 Belongs to the aldolase LacD family
PDCPOIID_01890 1.22e-220 yqhA - - G - - - Aldose 1-epimerase
PDCPOIID_01891 1.67e-159 - - - T ko:K07705 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 LytTr DNA-binding domain
PDCPOIID_01892 7.7e-127 - - - T - - - GHKL domain
PDCPOIID_01893 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter
PDCPOIID_01894 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter
PDCPOIID_01895 0.0 metG 6.1.1.10 - J ko:K01874 ko00450,ko00970,map00450,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PDCPOIID_01896 4.11e-223 pepI 3.4.11.5 - E ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 Releases the N-terminal proline from various substrates
PDCPOIID_01897 9.84e-195 yunF - - F - - - Protein of unknown function DUF72
PDCPOIID_01898 7.41e-117 - 3.6.1.55 - F ko:K03574 - ko00000,ko01000,ko03400 NUDIX domain
PDCPOIID_01899 3.11e-218 - 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily
PDCPOIID_01900 9.14e-139 yiiE - - S - - - Protein of unknown function (DUF1211)
PDCPOIID_01901 4.66e-164 cobB - - K ko:K12410 - ko00000,ko01000 Sir2 family
PDCPOIID_01902 6.41e-24 - - - - - - - -
PDCPOIID_01903 3.77e-218 - - - - - - - -
PDCPOIID_01904 3.21e-125 yxkA - - S ko:K06910 - ko00000 Phosphatidylethanolamine-binding protein
PDCPOIID_01905 4.7e-50 - - - - - - - -
PDCPOIID_01906 5.77e-204 ypuA - - S - - - Protein of unknown function (DUF1002)
PDCPOIID_01907 2.57e-223 ppx 3.6.1.11, 3.6.1.40 - FP ko:K01524 ko00230,map00230 ko00000,ko00001,ko01000 exopolyphosphatase
PDCPOIID_01908 0.0 ppk 2.7.4.1 - P ko:K00937 ko00190,ko03018,map00190,map03018 ko00000,ko00001,ko01000,ko03019 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PDCPOIID_01909 0.0 ppx3 3.6.1.11, 3.6.1.40 - FP ko:K01524 ko00230,map00230 ko00000,ko00001,ko01000 exopolyphosphatase
PDCPOIID_01910 7.1e-224 ydhF - - S - - - Aldo keto reductase
PDCPOIID_01911 6.93e-197 - - - Q - - - Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
PDCPOIID_01912 2.76e-120 ywnH 2.3.1.183 - M ko:K03823 ko00440,ko01130,map00440,map01130 ko00000,ko00001,ko01000 Acetyltransferase (GNAT) domain
PDCPOIID_01913 2.27e-305 dinF - - V - - - MatE
PDCPOIID_01914 7.19e-157 - - - S ko:K06872 - ko00000 TPM domain
PDCPOIID_01915 1.15e-132 lemA - - S ko:K03744 - ko00000 LemA family
PDCPOIID_01916 2.86e-244 trpS 6.1.1.2 - J ko:K01867 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
PDCPOIID_01917 3.69e-187 - - - V - - - efflux transmembrane transporter activity
PDCPOIID_01918 2.22e-170 - - - V - - - ATPases associated with a variety of cellular activities
PDCPOIID_01919 7.28e-25 - - - V - - - ATPases associated with a variety of cellular activities
PDCPOIID_01920 5.93e-12 - - - - - - - -
PDCPOIID_01922 0.0 clpB - - O ko:K03695 ko04213,map04213 ko00000,ko00001,ko03110 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PDCPOIID_01923 1.35e-38 rpmF - - J ko:K02911 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bL32 family
PDCPOIID_01924 6.3e-123 - - - K - - - Domain of unknown function (DUF1836)
PDCPOIID_01925 0.0 ycjM 3.1.3.5, 3.1.3.6, 3.1.4.16 - F ko:K01119,ko:K08693 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 5'-nucleotidase, C-terminal domain
PDCPOIID_01926 4.99e-184 - - - - - - - -
PDCPOIID_01927 8.1e-36 - - - S - - - Protein of unknown function (DUF2929)
PDCPOIID_01928 0.0 dnaE 2.7.7.7 - L ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase
PDCPOIID_01929 2.21e-227 pfkA 2.7.1.11 - F ko:K00850 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230 ko00000,ko00001,ko00002,ko01000,ko01009,ko03019 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PDCPOIID_01930 0.0 pyk 2.7.1.40 - G ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the pyruvate kinase family
PDCPOIID_01931 4.31e-95 ytwI - - S - - - Protein of unknown function (DUF441)
PDCPOIID_01932 5.96e-207 yitL - - S ko:K00243 - ko00000 S1 domain
PDCPOIID_01933 8.18e-210 xerD - - D ko:K04763 - ko00000,ko03036 recombinase XerD
PDCPOIID_01934 1.59e-88 ribT - - K ko:K02859 - ko00000 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PDCPOIID_01935 1.07e-159 scpA - - D ko:K05896 - ko00000,ko03036 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PDCPOIID_01936 8.74e-139 scpB - - D ko:K06024 - ko00000,ko03036 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PDCPOIID_01937 3.15e-175 rluB 5.4.99.22 - J ko:K06178 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
PDCPOIID_01938 4.35e-123 ribU - - U - - - Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PDCPOIID_01939 1.92e-59 fer - - C ko:K05337 - ko00000 4Fe-4S single cluster domain of Ferredoxin I
PDCPOIID_01940 3.7e-234 - - - S - - - Helix-turn-helix domain
PDCPOIID_01941 0.0 recQ 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
PDCPOIID_01942 1.68e-104 - - - M - - - Lysin motif
PDCPOIID_01943 2.04e-149 cmk 2.7.4.25 - F ko:K00945 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the cytidylate kinase family. Type 1 subfamily
PDCPOIID_01944 2.01e-302 rpsA - - J ko:K02945 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein S1
PDCPOIID_01945 8.65e-311 der - - S ko:K03977 - ko00000,ko03009 GTPase that plays an essential role in the late steps of ribosome biogenesis
PDCPOIID_01946 1.2e-54 hup - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PDCPOIID_01947 6.2e-302 XK27_05225 - - S - - - Tetratricopeptide repeat protein
PDCPOIID_01948 8.71e-200 ypjC - - S - - - Uncharacterised 5xTM membrane BCR, YitT family COG1284
PDCPOIID_01949 5.31e-284 cca 2.7.7.72 - J ko:K00974 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PDCPOIID_01950 2.95e-110 - - - - - - - -
PDCPOIID_01951 0.0 yfmR - - S ko:K15738 - ko00000,ko02000 ABC transporter, ATP-binding protein
PDCPOIID_01952 9.91e-243 thyA 2.1.1.45 - F ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PDCPOIID_01953 3.64e-119 folA 1.5.1.3 - H ko:K00287 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PDCPOIID_01954 5.26e-148 hlyIII - - S ko:K11068 - ko00000,ko02042 protein, hemolysin III
PDCPOIID_01955 4.9e-190 WQ51_01275 - - S - - - EDD domain protein, DegV family
PDCPOIID_01956 2.81e-195 XK27_03630 - - E - - - GDSL-like Lipase/Acylhydrolase
PDCPOIID_01957 3.18e-147 ypmS - - S - - - Uncharacterized protein conserved in bacteria (DUF2140)
PDCPOIID_01958 6.11e-111 msrA 1.8.4.11 - C ko:K07304 - ko00000,ko01000 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PDCPOIID_01959 1.03e-54 yozE - - S - - - Belongs to the UPF0346 family
PDCPOIID_01960 4.3e-316 ctpA 3.4.21.102 - M ko:K03797 - ko00000,ko01000,ko01002 Belongs to the peptidase S41A family
PDCPOIID_01961 8.99e-64 - - - K - - - Helix-turn-helix domain
PDCPOIID_01962 1.46e-204 rbgA - - S ko:K14540 - ko00000,ko03009 Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PDCPOIID_01963 8.34e-178 rnhB 3.1.26.4 - L ko:K03470 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDCPOIID_01964 1.82e-186 dprA - - LU ko:K04096 - ko00000 DNA protecting protein DprA
PDCPOIID_01965 0.0 topA 5.99.1.2 - L ko:K03168 - ko00000,ko01000,ko03032,ko03400 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PDCPOIID_01966 0.0 trmFO 2.1.1.74 - J ko:K04094 - ko00000,ko01000,ko03016,ko03036 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PDCPOIID_01967 1.66e-216 xerC - - D ko:K03733,ko:K04763 - ko00000,ko03036 Belongs to the 'phage' integrase family. XerC subfamily
PDCPOIID_01968 2.06e-119 hslV 3.4.25.2 - O ko:K01419 - ko00000,ko01000,ko01002 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PDCPOIID_01969 0.0 hslU - - O ko:K03667 - ko00000,ko03110 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PDCPOIID_01970 5.38e-219 lacX 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Aldose 1-epimerase
PDCPOIID_01971 6.92e-141 plsY 2.3.1.15 - I ko:K08591 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PDCPOIID_01972 0.0 parE - - L ko:K02622 - ko00000,ko01000,ko02048,ko03032,ko03036 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PDCPOIID_01973 0.0 parC - - L ko:K02621 - ko00000,ko01000,ko02048,ko03032,ko03036 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PDCPOIID_01974 0.0 pflB 2.3.1.54 - C ko:K00656 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 ko00000,ko00001,ko01000 Pyruvate formate lyase-like
PDCPOIID_01975 2.56e-217 pflA 1.97.1.4 - C ko:K04069 - ko00000,ko01000 Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PDCPOIID_01976 2.6e-232 - - - K - - - LysR substrate binding domain
PDCPOIID_01977 9.27e-220 ppaC 3.6.1.1 - C ko:K15986 ko00190,map00190 ko00000,ko00001,ko01000 inorganic pyrophosphatase
PDCPOIID_01978 6.01e-269 xerS - - L ko:K04763 - ko00000,ko03036 Belongs to the 'phage' integrase family
PDCPOIID_01979 7.18e-79 - - - - - - - -
PDCPOIID_01980 0.0 XK27_05700 - - V ko:K02004,ko:K19084 ko02010,ko02020,map02010,map02020 ko00000,ko00001,ko00002,ko02000 FtsX-like permease family
PDCPOIID_01981 2.68e-176 XK27_05695 - - V ko:K02003,ko:K19083 ko02010,ko02020,map02010,map02020 ko00000,ko00001,ko00002,ko02000 ABC transporter, ATP-binding protein
PDCPOIID_01982 3.48e-219 kinG - - T - - - Histidine kinase-like ATPases
PDCPOIID_01983 2.9e-158 - - - T - - - Transcriptional regulatory protein, C terminal
PDCPOIID_01984 3.92e-236 - - - EGP ko:K08217 - br01600,ko00000,ko01504,ko02000 Transmembrane secretion effector
PDCPOIID_01985 5.88e-62 - - - K - - - Acetyltransferase (GNAT) domain
PDCPOIID_01986 1.62e-81 - - - K - - - Acetyltransferase (GNAT) domain
PDCPOIID_01987 2.92e-144 - - - C - - - Nitroreductase family
PDCPOIID_01988 6.63e-258 hisC 2.6.1.9 - E ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PDCPOIID_01989 6.09e-70 hisE 3.6.1.31 - E ko:K01523 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 phosphoribosyl-ATP diphosphatase activity
PDCPOIID_01990 5.84e-77 hisI 3.5.4.19, 3.6.1.31 - E ko:K01496,ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PDCPOIID_01991 4.08e-169 hisF - - E ko:K02500 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PDCPOIID_01992 2.18e-157 hisA 5.3.1.16 - E ko:K01814 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PDCPOIID_01993 4.89e-146 hisH - - E ko:K02501 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PDCPOIID_01994 3.22e-135 hisB 4.2.1.19 - E ko:K01693 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 imidazoleglycerol-phosphate dehydratase
PDCPOIID_01995 3.4e-294 hisD 1.1.1.23 - E ko:K00013 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PDCPOIID_01996 2.81e-142 hisG 2.4.2.17 - F ko:K00765,ko:K02502 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
PDCPOIID_01997 3.15e-277 hisZ - - E ko:K02502 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
PDCPOIID_01998 1.99e-260 hisC 2.6.1.9 - E ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PDCPOIID_01999 3.22e-127 - 3.6.1.13 - L ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 Belongs to the Nudix hydrolase family
PDCPOIID_02000 2.95e-205 - - - S - - - EDD domain protein, DegV family
PDCPOIID_02001 0.0 FbpA - - K - - - Fibronectin-binding protein
PDCPOIID_02002 1.73e-66 - - - S - - - MazG-like family
PDCPOIID_02003 6.8e-209 pfoS/R - - S ko:K07035 - ko00000 Phosphotransferase system, EIIC
PDCPOIID_02004 4.4e-29 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL33 family
PDCPOIID_02005 2.09e-30 secE - - U ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PDCPOIID_02006 2.29e-130 nusG - - K ko:K02601 - ko00000,ko03009,ko03021 Participates in transcription elongation, termination and antitermination
PDCPOIID_02007 1.71e-205 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
PDCPOIID_02008 3.77e-102 - - - F - - - Nucleoside 2-deoxyribosyltransferase
PDCPOIID_02009 0.0 rtpR 1.17.4.2 - F ko:K00527 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000 ribonucleoside-triphosphate reductase activity
PDCPOIID_02010 3.54e-82 - - - S - - - Domain of unknown function (DUF4430)
PDCPOIID_02011 1.36e-125 - - - S ko:K16927 - ko00000,ko00002,ko02000 ECF transporter, substrate-specific component
PDCPOIID_02012 8.09e-116 yvqK 2.5.1.17 - S ko:K00798 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 Cobalamin adenosyltransferase
PDCPOIID_02013 3.48e-86 frataxin - - S ko:K05937 - ko00000 Domain of unknown function (DU1801)
PDCPOIID_02014 0.0 nylA 3.5.1.4 - J ko:K01426 ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120 ko00000,ko00001,ko01000 Belongs to the amidase family
PDCPOIID_02015 4.41e-76 mgtA 3.6.3.2 - P ko:K01531 - ko00000,ko01000 COG0474 Cation transport ATPase
PDCPOIID_02016 0.0 mgtA 3.6.3.2 - P ko:K01531 - ko00000,ko01000 COG0474 Cation transport ATPase
PDCPOIID_02017 6.87e-93 rplK - - J ko:K02867 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PDCPOIID_02018 1.89e-158 rplA - - J ko:K02863 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PDCPOIID_02019 0.0 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 - C ko:K00135 ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Belongs to the aldehyde dehydrogenase family
PDCPOIID_02020 1.19e-277 yceI - - G ko:K08369 - ko00000,ko02000 Sugar (and other) transporter
PDCPOIID_02021 1.4e-86 - - - - - - - -
PDCPOIID_02022 1.66e-197 - - - K - - - acetyltransferase
PDCPOIID_02023 1.92e-283 mdtG - - EGP ko:K08161 - ko00000,ko02000 Transporter, major facilitator family protein
PDCPOIID_02024 7.23e-108 rplJ - - J ko:K02864 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PDCPOIID_02025 1.37e-74 rplL - - J ko:K02935 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PDCPOIID_02027 4.18e-206 - 5.2.1.8 - M ko:K07533 - ko00000,ko01000,ko03110 Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PDCPOIID_02029 1.38e-97 - - - - - - - -
PDCPOIID_02030 8.14e-79 - - - S - - - MucBP domain
PDCPOIID_02031 4.34e-151 - - - S ko:K07118 - ko00000 NAD(P)H-binding
PDCPOIID_02034 3.35e-167 - - - E - - - lipolytic protein G-D-S-L family
PDCPOIID_02035 2.14e-22 - - - P ko:K04758 - ko00000,ko02000 FeoA
PDCPOIID_02036 1.01e-54 feoA - - P ko:K04758 - ko00000,ko02000 FeoA
PDCPOIID_02037 0.0 feoB - - P ko:K04759 - ko00000,ko02000 transporter of a GTP-driven Fe(2 ) uptake system
PDCPOIID_02038 6.28e-25 - - - S - - - Virus attachment protein p12 family
PDCPOIID_02039 0.0 pckA 4.1.1.49 - C ko:K01610 ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Phosphoenolpyruvate carboxykinase
PDCPOIID_02040 8.15e-77 - - - - - - - -
PDCPOIID_02041 4.2e-289 - 3.2.1.51 GH29 G ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 Alpha-L-fucosidase
PDCPOIID_02042 0.0 - - - G - - - MFS/sugar transport protein
PDCPOIID_02043 6.13e-100 - - - S - - - function, without similarity to other proteins
PDCPOIID_02044 1.71e-87 - - - - - - - -
PDCPOIID_02045 0.0 - - - V ko:K02003,ko:K02004 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PDCPOIID_02046 0.0 dtpT - - U ko:K03305 - ko00000 amino acid peptide transporter
PDCPOIID_02047 5.73e-201 - - - S - - - Calcineurin-like phosphoesterase
PDCPOIID_02050 0.0 yuxL 3.4.19.1 - E ko:K01303 - ko00000,ko01000,ko01002 Prolyl oligopeptidase family
PDCPOIID_02051 6.51e-177 proC 1.5.1.2 - E ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PDCPOIID_02052 4.31e-279 nagA 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Belongs to the metallo-dependent hydrolases superfamily. NagA family
PDCPOIID_02053 1.62e-161 yvoA_2 - - K ko:K03710 - ko00000,ko03000 UbiC transcription regulator-associated domain protein
PDCPOIID_02054 0.0 pncB 6.3.4.21 - F ko:K00763 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PDCPOIID_02055 1.11e-280 - - - V - - - Beta-lactamase
PDCPOIID_02056 2.51e-195 nadE 6.3.1.5 - F ko:K01916 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PDCPOIID_02057 9.77e-278 - - - V - - - Beta-lactamase
PDCPOIID_02058 0.0 pacL 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
PDCPOIID_02059 0.0 - 1.2.3.3 - EH ko:K00158 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000 Belongs to the TPP enzyme family
PDCPOIID_02060 1.74e-224 - - - I - - - Diacylglycerol kinase catalytic domain
PDCPOIID_02061 1.41e-85 gtcA2 - - S - - - Teichoic acid glycosylation protein
PDCPOIID_02062 4.31e-166 srtA 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
PDCPOIID_02063 4.01e-240 ydbI - - K - - - AI-2E family transporter
PDCPOIID_02064 5.93e-262 pbpX - - V - - - Beta-lactamase
PDCPOIID_02065 1.61e-198 - - - S - - - zinc-ribbon domain
PDCPOIID_02066 4.74e-30 - - - - - - - -
PDCPOIID_02067 7.77e-167 gpmA 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PDCPOIID_02068 4.68e-109 - - - F - - - NUDIX domain
PDCPOIID_02069 0.0 lmrA 3.6.3.44 - V ko:K02021,ko:K18104 ko01501,ko02010,map01501,map02010 ko00000,ko00001,ko00002,ko01000,ko01504,ko02000 ABC transporter
PDCPOIID_02070 1.47e-136 - - - K - - - Transcriptional regulator, MarR family
PDCPOIID_02071 1.83e-256 - - - - - - - -
PDCPOIID_02072 2.05e-215 - - - S - - - Putative esterase
PDCPOIID_02073 4.62e-13 tcaA - - S ko:K21463 - ko00000 response to antibiotic
PDCPOIID_02075 0.0 pepD - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
PDCPOIID_02076 6.62e-143 - - - S - - - Membrane
PDCPOIID_02077 4.32e-133 - - - - - - - -
PDCPOIID_02078 1.71e-58 - - - - - - - -
PDCPOIID_02079 5.26e-56 ybfG - - M - - - peptidoglycan-binding domain-containing protein
PDCPOIID_02080 6.4e-317 comA - - V ko:K06147,ko:K06148,ko:K12292,ko:K20344 ko02010,ko02020,ko02024,map02010,map02020,map02024 ko00000,ko00001,ko01000,ko02000 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PDCPOIID_02081 2.67e-308 mesE - - M ko:K12293,ko:K20345 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko02000 Transport protein ComB
PDCPOIID_02082 6.92e-81 - - - - - - - -
PDCPOIID_02084 0.0 - - - S - - - Putative threonine/serine exporter
PDCPOIID_02085 7.02e-59 spiA - - K - - - TRANSCRIPTIONal
PDCPOIID_02086 2.5e-57 - - - S - - - Enterocin A Immunity
PDCPOIID_02087 6.69e-61 - - - S - - - Enterocin A Immunity
PDCPOIID_02088 2.99e-176 - - - - - - - -
PDCPOIID_02089 6.77e-81 - - - - - - - -
PDCPOIID_02090 2.4e-71 padR - - K ko:K10947 - ko00000,ko03000 Transcriptional regulator PadR-like family
PDCPOIID_02091 6.16e-145 - - - K - - - Helix-turn-helix XRE-family like proteins
PDCPOIID_02092 9.85e-263 - - - S - - - Protein of unknown function (DUF2974)
PDCPOIID_02093 1.09e-292 - - - N ko:K09384 - ko00000 Uncharacterized conserved protein (DUF2075)
PDCPOIID_02095 1.87e-191 p40 - - D ko:K21471 - ko00000,ko01000,ko01002,ko01011 CHAP domain
PDCPOIID_02096 0.0 ylbB - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
PDCPOIID_02097 3.08e-80 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PDCPOIID_02098 9.58e-215 gntZ 1.1.1.343, 1.1.1.44 - G ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Dehydrogenase
PDCPOIID_02099 1.27e-186 gntR - - K - - - rpiR family
PDCPOIID_02100 8.2e-211 yvgN - - C - - - Aldo keto reductase
PDCPOIID_02101 2.71e-182 racD 5.1.1.13 - G ko:K01779 ko00250,ko01054,map00250,map01054 ko00000,ko00001,ko01000 Belongs to the aspartate glutamate racemases family
PDCPOIID_02102 0.0 murE 6.3.2.13, 6.3.2.7 - M ko:K01928,ko:K05362 ko00300,ko00550,ko01100,map00300,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PDCPOIID_02103 2.06e-103 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PDCPOIID_02104 2.75e-303 dacA 3.4.16.4 - M ko:K01286,ko:K07258 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01002,ko01011 Belongs to the peptidase S11 family
PDCPOIID_02105 2.81e-278 hpk31 - - T - - - Histidine kinase
PDCPOIID_02106 1.68e-156 vanR - - K - - - response regulator
PDCPOIID_02107 1.18e-155 - - - - - - - -
PDCPOIID_02108 0.0 guaB 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PDCPOIID_02109 7.12e-169 - - - S - - - Protein of unknown function (DUF1129)
PDCPOIID_02110 9.76e-237 ychF - - J ko:K06942 - ko00000,ko03009 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PDCPOIID_02111 3.26e-40 yyzM - - S - - - Bacterial protein of unknown function (DUF951)
PDCPOIID_02112 1.11e-201 spo0J - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
PDCPOIID_02113 1.49e-177 soj - - D ko:K03496 - ko00000,ko03036,ko04812 Sporulation initiation inhibitor
PDCPOIID_02114 6.56e-187 noc - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
PDCPOIID_02115 2.27e-167 rsmG 2.1.1.170 - J ko:K03501 - ko00000,ko01000,ko03009,ko03036 Specifically methylates the N7 position of a guanine in 16S rRNA
PDCPOIID_02116 4.01e-87 - - - - - - - -
PDCPOIID_02117 1.35e-164 cobQ - - S ko:K07009 - ko00000 glutamine amidotransferase
PDCPOIID_02118 6.15e-139 - 1.5.1.40 - S ko:K06988 - ko00000,ko01000 NADP oxidoreductase coenzyme F420-dependent
PDCPOIID_02119 5.7e-153 pcp 3.4.19.3 - O ko:K01304 - ko00000,ko01000,ko01002 Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PDCPOIID_02120 1.82e-144 - - - S - - - Protein of unknown function (DUF979)
PDCPOIID_02121 5.67e-21 - - - M - - - Peptidoglycan-binding domain 1 protein
PDCPOIID_02123 0.0 ykpA - - S - - - ABC transporter, ATP-binding protein
PDCPOIID_02124 0.0 - - - L - - - ATPase domain of DNA mismatch repair MUTS family
PDCPOIID_02125 1.48e-144 ung2 - - L - - - Uracil-DNA glycosylase
PDCPOIID_02126 1.56e-169 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
PDCPOIID_02127 0.0 glpD 1.1.3.21, 1.1.5.3 - C ko:K00105,ko:K00111 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 C-terminal domain of alpha-glycerophosphate oxidase
PDCPOIID_02128 2.95e-271 glpK 2.7.1.30 - F ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 ko00000,ko00001,ko01000,ko04147 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PDCPOIID_02129 2.04e-63 glpK 2.7.1.30 - F ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 ko00000,ko00001,ko01000,ko04147 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PDCPOIID_02130 4.62e-91 - - - M - - - Glycosyltransferase like family 2
PDCPOIID_02131 1.37e-64 - - - M - - - Glycosyltransferase like family 2
PDCPOIID_02132 6.67e-282 galK 2.7.1.6 - F ko:K00849 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PDCPOIID_02133 4.24e-247 galE 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family
PDCPOIID_02134 0.0 galT 2.7.7.12 - G ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 ko00000,ko00001,ko00002,ko01000 UDP-glucose--hexose-1-phosphate uridylyltransferase
PDCPOIID_02135 1.39e-217 msmR - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator
PDCPOIID_02136 0.0 - - - E - - - Amino acid permease
PDCPOIID_02137 9.8e-282 - - - S ko:K07045 - ko00000 Amidohydrolase
PDCPOIID_02138 0.0 - 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 Glutamine synthetase, catalytic domain
PDCPOIID_02139 3.29e-183 puuD - - S ko:K07010 - ko00000,ko01002 peptidase C26
PDCPOIID_02140 2.15e-183 - - - H - - - Protein of unknown function (DUF1698)
PDCPOIID_02141 5.41e-191 ykfB 5.1.1.20 - M ko:K19802 - ko00000,ko01000 Belongs to the mandelate racemase muconate lactonizing enzyme family
PDCPOIID_02142 1.66e-247 pbpE - - V - - - Beta-lactamase
PDCPOIID_02144 0.0 cidC 1.2.3.3 - EH ko:K00158 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000 Belongs to the TPP enzyme family
PDCPOIID_02145 5.36e-215 fba 4.1.2.13, 4.1.2.29 - G ko:K01624,ko:K03339 ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Fructose-1,6-bisphosphate aldolase, class II
PDCPOIID_02146 1.32e-137 tag 3.2.2.20 - L ko:K01246 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 glycosylase
PDCPOIID_02147 4.89e-139 ydfF - - K - - - Transcriptional
PDCPOIID_02148 1.82e-258 yceJ - - EGP ko:K08221 - ko00000,ko02000 transporter
PDCPOIID_02149 2.98e-64 yczG - - K - - - Helix-turn-helix domain
PDCPOIID_02150 0.0 - - - L - - - Exonuclease
PDCPOIID_02152 8.58e-06 - - - - - - - -
PDCPOIID_02153 0.0 ybfG - - M - - - peptidoglycan-binding domain-containing protein
PDCPOIID_02155 1.55e-19 - - - - - - - -
PDCPOIID_02157 2.47e-105 - - - L - - - Initiator Replication protein
PDCPOIID_02163 3.28e-183 - - - S - - - CAAX protease self-immunity
PDCPOIID_02165 3.81e-73 - - - - - - - -
PDCPOIID_02167 3.38e-72 - - - S - - - Enterocin A Immunity
PDCPOIID_02168 3.07e-135 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
PDCPOIID_02172 1.45e-231 ydhF - - S - - - Aldo keto reductase
PDCPOIID_02173 5.81e-165 - - - S - - - Belongs to the short-chain dehydrogenases reductases (SDR) family
PDCPOIID_02174 1.28e-274 yqiG - - C - - - Oxidoreductase
PDCPOIID_02175 0.0 fumC 4.2.1.2 - C ko:K01679 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211 ko00000,ko00001,ko00002,ko01000 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PDCPOIID_02176 2.2e-173 - - - - - - - -
PDCPOIID_02177 5.81e-22 - - - - - - - -
PDCPOIID_02178 0.0 mntH - - P ko:K03322 - ko00000,ko02000 H( )-stimulated, divalent metal cation uptake system
PDCPOIID_02179 0.0 atp2C1 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
PDCPOIID_02180 5.65e-73 - - - - - - - -
PDCPOIID_02181 2.09e-304 - - - EGP - - - Major Facilitator Superfamily
PDCPOIID_02182 0.0 sufI - - Q - - - Multicopper oxidase
PDCPOIID_02183 8.86e-35 - - - - - - - -
PDCPOIID_02184 2.22e-144 - - - P - - - Cation efflux family
PDCPOIID_02185 1.23e-69 czrA - - K ko:K22043 - ko00000,ko03000 Transcriptional regulator, ArsR family
PDCPOIID_02186 6.58e-226 mntA - - P ko:K19975,ko:K19976 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the bacterial solute-binding protein 9 family
PDCPOIID_02187 2.4e-184 mtsB - - U ko:K19972,ko:K19976 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC 3 transport family
PDCPOIID_02188 3.38e-170 - 3.6.3.35 - P ko:K19973 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 AAA domain, putative AbiEii toxin, Type IV TA system
PDCPOIID_02189 0.0 aldA 1.2.1.21, 1.2.1.22 - C ko:K07248 ko00620,ko00630,ko01120,map00620,map00630,map01120 ko00000,ko00001,ko01000 Belongs to the aldehyde dehydrogenase family
PDCPOIID_02190 6.85e-55 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PDCPOIID_02191 2.26e-213 psaA - - P ko:K02077,ko:K11707 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the bacterial solute-binding protein 9 family
PDCPOIID_02192 1.15e-151 - - - GM - - - NmrA-like family
PDCPOIID_02193 6.65e-145 yjhB 3.6.1.13 - F ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 NUDIX domain
PDCPOIID_02194 2.87e-101 - - - - - - - -
PDCPOIID_02195 8.21e-22 - - - M - - - domain protein
PDCPOIID_02196 1.93e-289 - - - M - - - domain protein
PDCPOIID_02197 2.48e-43 psaA - - P ko:K02077,ko:K11707 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the bacterial solute-binding protein 9 family
PDCPOIID_02198 3.26e-153 psaA - - P ko:K02077,ko:K11707 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the bacterial solute-binding protein 9 family
PDCPOIID_02199 2.1e-27 - - - - - - - -
PDCPOIID_02200 1.29e-95 - - - - - - - -
PDCPOIID_02201 2.71e-159 cah 4.2.1.1 - P ko:K01674 ko00910,map00910 ko00000,ko00001,ko01000 Eukaryotic-type carbonic anhydrase
PDCPOIID_02202 1.06e-69 ybjQ - - S - - - Belongs to the UPF0145 family
PDCPOIID_02203 2.92e-203 - - - C - - - nadph quinone reductase
PDCPOIID_02204 2.09e-315 amt - - P ko:K03320 - ko00000,ko02000 ammonium transporter
PDCPOIID_02205 2.3e-226 ywbN - - P ko:K07223,ko:K16301 - ko00000,ko01000,ko02000 Peroxidase
PDCPOIID_02206 2.22e-154 yqgG - - S ko:K07507 - ko00000,ko02000 MgtC family
PDCPOIID_02207 6.52e-153 endA - - F ko:K15051 - ko00000 DNA RNA non-specific endonuclease
PDCPOIID_02209 1.02e-260 dnaN 2.7.7.7 - L ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PDCPOIID_02210 0.0 dnaA - - L ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PDCPOIID_02211 3.26e-23 rpmH - - J ko:K02914 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL34 family
PDCPOIID_02212 2.99e-77 rnpA 3.1.26.5 - J ko:K03536 - ko00000,ko01000,ko03016 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PDCPOIID_02213 1.04e-177 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PDCPOIID_02214 7.05e-171 jag - - S ko:K06346 - ko00000 R3H domain protein
PDCPOIID_02215 0.0 mnmE - - S ko:K03650 - ko00000,ko01000,ko03016 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PDCPOIID_02216 0.0 gidA - - D ko:K03495 - ko00000,ko03016,ko03036 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PDCPOIID_02218 3.8e-175 labL - - S - - - Putative threonine/serine exporter
PDCPOIID_02219 1.48e-104 - - - S - - - Threonine/Serine exporter, ThrE
PDCPOIID_02220 1.53e-288 amd - - E - - - Peptidase family M20/M25/M40
PDCPOIID_02221 1.05e-253 ypjH - - C ko:K08317 - ko00000,ko01000 dehydrogenase
PDCPOIID_02222 4.73e-209 - - - M - - - Peptidoglycan-binding domain 1 protein
PDCPOIID_02223 3.15e-98 - - - S - - - NusG domain II
PDCPOIID_02224 0.0 cydD1 - - CO ko:K06147,ko:K06148 - ko00000,ko02000 ABC transporter transmembrane region
PDCPOIID_02225 0.0 msbA9 - - V ko:K06148 - ko00000,ko02000 ABC transporter transmembrane region
PDCPOIID_02226 4.16e-199 bglG4 - - K ko:K03488 - ko00000,ko03000 CAT RNA binding domain
PDCPOIID_02227 0.0 bglP - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
PDCPOIID_02228 0.0 bglH 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
PDCPOIID_02229 8.23e-126 - - - K ko:K18939 - ko00000,ko00002,ko03000 Bacterial regulatory proteins, tetR family
PDCPOIID_02230 2.42e-117 - - - T - - - ECF transporter, substrate-specific component
PDCPOIID_02231 6.13e-232 ansB 3.5.1.1 - EJ ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 ko00000,ko00001,ko01000 Asparaginase
PDCPOIID_02232 3.86e-185 fat 3.1.2.21 - I ko:K01071 ko00061,ko01100,map00061,map01100 ko00000,ko00001,ko01000,ko01004 Acyl-ACP thioesterase
PDCPOIID_02233 1.74e-191 rsmI 2.1.1.198 - H ko:K07056 - ko00000,ko01000,ko03009 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PDCPOIID_02234 7.92e-76 yabA - - L - - - Involved in initiation control of chromosome replication
PDCPOIID_02235 5.36e-222 holB 2.7.7.7 - L ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
PDCPOIID_02236 1.14e-69 yaaQ - - S - - - Cyclic-di-AMP receptor
PDCPOIID_02237 1.45e-150 tmk 2.7.4.9 - F ko:K00943 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PDCPOIID_02238 8.47e-46 - - - S - - - Protein of unknown function (DUF2508)
PDCPOIID_02239 1.26e-139 recR - - L ko:K06187 ko03440,map03440 ko00000,ko00001,ko03400 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PDCPOIID_02240 7e-49 yaaK - - S ko:K09747 - ko00000 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PDCPOIID_02241 0.0 dnaX 2.7.7.7 - L ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PDCPOIID_02242 4.38e-118 tadA 3.5.4.33 - F ko:K11991 - ko00000,ko01000,ko03016 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PDCPOIID_02243 9.05e-67 - - - - - - - -
PDCPOIID_02244 2.35e-139 rsmC 2.1.1.172 - J ko:K00564 - ko00000,ko01000,ko03009 Methyltransferase
PDCPOIID_02245 0.0 mprF 2.3.2.3 - S ko:K14205 ko01503,ko02020,ko05150,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01000,ko01504 Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PDCPOIID_02246 1.15e-59 - - - - - - - -
PDCPOIID_02247 7.1e-224 ccpB - - K - - - lacI family
PDCPOIID_02248 0.0 prtB 3.4.21.96 - O ko:K01361 - ko00000,ko01000,ko01002,ko03110 Belongs to the peptidase S8 family
PDCPOIID_02250 1.16e-14 - - - - - - - -
PDCPOIID_02251 1.42e-240 - - - E - - - M42 glutamyl aminopeptidase
PDCPOIID_02252 2.04e-68 - 2.7.1.196, 2.7.1.205 - G ko:K02759 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIA subunit
PDCPOIID_02253 4.51e-74 - 2.7.1.196, 2.7.1.205 - G ko:K02760 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
PDCPOIID_02254 0.0 - - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDCPOIID_02255 3.92e-245 - 3.4.11.9 - E ko:K01262 - ko00000,ko01000,ko01002 Creatinase/Prolidase N-terminal domain
PDCPOIID_02256 5.05e-241 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I
PDCPOIID_02257 6.23e-286 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2325)
PDCPOIID_02258 1.92e-178 - - - - - - - -
PDCPOIID_02259 1.58e-60 - 2.7.1.200 - G ko:K02774 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
PDCPOIID_02260 2.36e-86 - 2.7.1.200, 2.7.1.204 - G ko:K02773,ko:K20112 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PDCPOIID_02261 4.19e-300 - - - G ko:K02775 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system sugar-specific permease component
PDCPOIID_02262 3.51e-182 srlD 1.1.1.140 - IQ ko:K00068 ko00051,map00051 ko00000,ko00001,ko01000 KR domain
PDCPOIID_02263 4.66e-75 lacC 2.7.1.144 - F ko:K00917 ko00052,ko01100,map00052,map01100 ko00000,ko00001,ko01000 pfkB family carbohydrate kinase
PDCPOIID_02264 6.89e-83 lacC 2.7.1.144 - F ko:K00917 ko00052,ko01100,map00052,map01100 ko00000,ko00001,ko01000 pfkB family carbohydrate kinase
PDCPOIID_02265 2.72e-85 - 2.7.1.191 - G ko:K02793 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system fructose IIA component
PDCPOIID_02266 2.47e-185 - - - G ko:K02796 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system mannose/fructose/sorbose family IID component
PDCPOIID_02267 1.45e-186 - - - G ko:K02795 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system sorbose-specific iic component
PDCPOIID_02268 5.61e-108 - 2.7.1.191 - G ko:K02794 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system sorbose subfamily IIB component
PDCPOIID_02269 4.85e-222 bgaC 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 Glycosyl hydrolases family 35
PDCPOIID_02270 3.06e-169 - - - L - - - Transposase, IS116 IS110 IS902 family
PDCPOIID_02271 0.0 glpK 2.7.1.30 - F ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 ko00000,ko00001,ko01000,ko04147 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PDCPOIID_02272 2.36e-167 rpl - - K - - - Helix-turn-helix domain, rpiR family
PDCPOIID_02273 1.88e-223 fruK-1 2.7.1.56 - H ko:K00882 ko00051,map00051 ko00000,ko00001,ko01000 pfkB family carbohydrate kinase
PDCPOIID_02274 0.0 fruC 2.7.1.202 - GT ko:K02769,ko:K02770 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PDCPOIID_02275 5.24e-116 - - - - - - - -
PDCPOIID_02276 4.42e-154 ydfK - - S ko:K07150 - ko00000 Protein of unknown function (DUF554)
PDCPOIID_02277 2.66e-233 recA - - L ko:K03553 ko03440,map03440 ko00000,ko00001,ko00002,ko03400 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PDCPOIID_02278 2.87e-289 - - - EK - - - Aminotransferase, class I
PDCPOIID_02279 8.49e-211 - - - K - - - LysR substrate binding domain
PDCPOIID_02280 3.81e-115 rnhA 3.1.26.4 - L ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDCPOIID_02281 7.22e-197 yitU 3.1.3.104 - S ko:K21064 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 hydrolase
PDCPOIID_02282 2.59e-160 gpmB - - G ko:K15640 - ko00000 Phosphoglycerate mutase family
PDCPOIID_02283 3.43e-138 - - - S - - - Protein of unknown function (DUF1275)
PDCPOIID_02284 1.99e-16 - - - - - - - -
PDCPOIID_02285 4.04e-79 - - - - - - - -
PDCPOIID_02286 2.79e-185 - - - S - - - hydrolase
PDCPOIID_02287 6.25e-246 yghZ - - C ko:K19265 - ko00000,ko01000 Aldo keto reductase family protein
PDCPOIID_02288 0.0 uvrA3 - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 excinuclease ABC
PDCPOIID_02289 6.41e-92 - - - K - - - MarR family
PDCPOIID_02290 8.07e-148 yagB - - S ko:K06950 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
PDCPOIID_02292 1.15e-147 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
PDCPOIID_02293 6.52e-222 ydiA - - P ko:K11041 ko05150,map05150 ko00000,ko00001,ko02042 Voltage-dependent anion channel
PDCPOIID_02294 1.62e-192 rlrG - - K ko:K21900 - ko00000,ko03000 Transcriptional regulator
PDCPOIID_02295 0.0 - - - L - - - DNA helicase
PDCPOIID_02297 1.82e-109 - - - - - - - -
PDCPOIID_02298 2.02e-306 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
PDCPOIID_02299 0.0 uvrB3 3.1.12.1 - KL ko:K07464 - ko00000,ko01000,ko02048 DEAD_2
PDCPOIID_02300 3.96e-154 - - - - - - - -
PDCPOIID_02301 3.56e-178 - - - - - - - -
PDCPOIID_02302 0.0 nox 1.6.3.4 - C ko:K17869 - ko00000,ko01000 NADH oxidase
PDCPOIID_02307 1.98e-91 - - - - - - - -
PDCPOIID_02308 7.89e-268 metK 2.5.1.6 - H ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PDCPOIID_02309 0.0 mdr - - EGP - - - Major Facilitator
PDCPOIID_02310 4.66e-105 - - - K - - - MerR HTH family regulatory protein
PDCPOIID_02311 0.0 ycnB - - U - - - Belongs to the major facilitator superfamily
PDCPOIID_02312 2.52e-153 - - - S - - - Domain of unknown function (DUF4811)
PDCPOIID_02313 7.4e-155 yodM 3.6.1.27 - I ko:K19302 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Acid phosphatase homologues
PDCPOIID_02314 0.0 leuS 6.1.1.4 - J ko:K01869 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Belongs to the class-I aminoacyl-tRNA synthetase family
PDCPOIID_02315 0.0 ytgP - - S ko:K03328 - ko00000 Polysaccharide biosynthesis protein
PDCPOIID_02316 1.56e-165 rsuA 5.4.99.19 - J ko:K06183 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
PDCPOIID_02317 9.15e-45 yhcC - - S ko:K07069 - ko00000 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
PDCPOIID_02318 3.37e-183 nnrD 4.2.1.136, 5.1.99.6 - H ko:K17758,ko:K17759 - ko00000,ko01000 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PDCPOIID_02319 2.55e-121 - - - F - - - NUDIX domain
PDCPOIID_02321 0.0 tagE2 2.4.1.52 GT4 M ko:K00712 - ko00000,ko01000,ko01003 Glycosyl transferases group 1
PDCPOIID_02322 0.0 tagE3 2.4.1.52 GT4 M ko:K00712 - ko00000,ko01000,ko01003 Glycosyl transferases group 1
PDCPOIID_02323 9.78e-112 gpo 1.11.1.9 - O ko:K00432 ko00480,ko00590,ko04918,map00480,map00590,map04918 ko00000,ko00001,ko01000 Belongs to the glutathione peroxidase family
PDCPOIID_02326 9.02e-298 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I
PDCPOIID_02327 0.0 cpdA - - S - - - Calcineurin-like phosphoesterase
PDCPOIID_02328 5.05e-52 XK27_08630 - - T ko:K07166 - ko00000 Belongs to the UPF0237 family
PDCPOIID_02329 3.93e-312 XK27_08635 - - S ko:K09157 - ko00000 UPF0210 protein
PDCPOIID_02330 1.72e-272 coiA - - S ko:K06198 - ko00000 Competence protein
PDCPOIID_02331 6.41e-148 yjbH - - Q - - - Thioredoxin
PDCPOIID_02332 7.28e-138 - - - S - - - CYTH
PDCPOIID_02333 1.19e-158 yjbM 2.7.6.5 - S ko:K07816 ko00230,map00230 ko00000,ko00001,ko01000 RelA SpoT domain protein
PDCPOIID_02334 1.05e-193 nadK 2.7.1.23 - F ko:K00858 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PDCPOIID_02335 2.88e-218 yjbO 5.4.99.23 - G ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
PDCPOIID_02336 9.8e-259 apbE 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PDCPOIID_02337 2.24e-148 cutC - - P ko:K06201 - ko00000 Participates in the control of copper homeostasis
PDCPOIID_02338 1.09e-183 uppP 3.6.1.27 - V ko:K06153 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PDCPOIID_02339 1.09e-226 yvdE - - K - - - helix_turn _helix lactose operon repressor
PDCPOIID_02340 4.36e-288 malA1 3.2.1.10, 3.2.1.20 GH13,GH31 G ko:K01182,ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain
PDCPOIID_02341 2.04e-94 malA1 3.2.1.10, 3.2.1.20 GH13,GH31 G ko:K01182,ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain
PDCPOIID_02342 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G ko:K01208 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 13 family
PDCPOIID_02343 0.0 mapA 2.4.1.8 GH65 G ko:K00691 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 hydrolase, family 65, central catalytic
PDCPOIID_02344 6.75e-153 - 5.4.2.6 - S ko:K01838 ko00500,map00500 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
PDCPOIID_02345 5.02e-20 msmX - - P ko:K10112 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
PDCPOIID_02346 1.9e-22 - - - - - - - -
PDCPOIID_02347 1.13e-32 - - - K ko:K07729 - ko00000,ko03000 Helix-turn-helix XRE-family like proteins
PDCPOIID_02348 8.82e-305 YSH1 - - S ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Metallo-beta-lactamase superfamily
PDCPOIID_02349 5.01e-311 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
PDCPOIID_02350 1.1e-188 malF - - G ko:K02026 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PDCPOIID_02351 7.01e-213 - - - P ko:K02025 - ko00000,ko00002,ko02000 ABC-type sugar transport systems, permease components
PDCPOIID_02352 3.08e-248 malK - - P ko:K10112,ko:K17240 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ATPases associated with a variety of cellular activities
PDCPOIID_02353 3.63e-136 - - - K ko:K06977 - ko00000 Acetyltransferase (GNAT) domain
PDCPOIID_02354 6.62e-40 - - - - - - - -
PDCPOIID_02355 2.87e-217 - - - L - - - Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PDCPOIID_02356 6.2e-68 - - - - - - - -
PDCPOIID_02357 1.63e-202 ycsE - - S - - - Sucrose-6F-phosphate phosphohydrolase
PDCPOIID_02358 1.45e-166 ung 3.2.2.27 - L ko:K03648 ko03410,ko05340,map03410,map05340 ko00000,ko00001,ko01000,ko03400 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PDCPOIID_02359 5.84e-226 pta 2.3.1.8, 3.6.3.21 - C ko:K00625,ko:K02028 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000,ko02000 phosphate acetyltransferase
PDCPOIID_02360 3.18e-106 ydiB - - O ko:K06925 - ko00000,ko03016 Hydrolase, P-loop family
PDCPOIID_02362 1.71e-209 ysdB - - S ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PDCPOIID_02363 3.18e-269 ysdA - - CP ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
PDCPOIID_02364 8.04e-129 dnaQ 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
PDCPOIID_02365 1.35e-192 exoA 3.1.11.2 - L ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 exodeoxyribonuclease III
PDCPOIID_02366 5.54e-212 murB 1.3.1.98 - M ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation
PDCPOIID_02367 0.0 yvgP - - P ko:K03316 - ko00000 Sodium proton antiporter
PDCPOIID_02368 1.97e-124 - - - K - - - Cupin domain
PDCPOIID_02369 9.1e-263 potA 3.6.3.30, 3.6.3.31 - P ko:K02010,ko:K11072 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PDCPOIID_02370 1.44e-189 potB - - P ko:K11071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PDCPOIID_02371 2.88e-187 potC - - P ko:K11070 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PDCPOIID_02372 5.73e-265 potD - - P ko:K11069 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PDCPOIID_02374 0.0 pacL - - P - - - Cation transporter/ATPase, N-terminus
PDCPOIID_02375 1.82e-144 - - - K - - - Transcriptional regulator
PDCPOIID_02376 1.04e-237 - - - V ko:K01992 - ko00000,ko00002,ko02000 ABC transporter
PDCPOIID_02377 3e-167 - - - V ko:K01990 - ko00000,ko00002,ko02000 AAA domain, putative AbiEii toxin, Type IV TA system
PDCPOIID_02378 3.82e-195 dacA 2.7.7.85 - S ko:K18672 - ko00000,ko01000 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PDCPOIID_02379 1.36e-217 ybbR - - S - - - YbbR-like protein
PDCPOIID_02380 0.0 glmM 5.4.2.10 - G ko:K03431 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko01000 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PDCPOIID_02381 0.0 glmS 2.6.1.16 - M ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 ko00000,ko00001,ko01000,ko01002 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PDCPOIID_02383 0.0 pepF2 - - E - - - Oligopeptidase F
PDCPOIID_02384 3.35e-106 - - - S - - - VanZ like family
PDCPOIID_02385 5.85e-169 yebC - - K - - - Transcriptional regulatory protein
PDCPOIID_02386 2.91e-196 comGA - - NU ko:K02243 - ko00000,ko00002,ko02044 Type II IV secretion system protein
PDCPOIID_02387 7.91e-219 comGB - - NU ko:K02244 - ko00000,ko00002,ko02044 type II secretion system
PDCPOIID_02388 2.86e-35 - - - - ko:K02245 - ko00000,ko00002,ko02044 -
PDCPOIID_02390 6.68e-32 - - - - - - - -
PDCPOIID_02391 8.03e-24 - - - - ko:K02248 - ko00000,ko00002,ko02044 -
PDCPOIID_02393 3.06e-238 ytxK 2.1.1.72 - L ko:K00571 - ko00000,ko01000,ko02048 N-6 DNA Methylase
PDCPOIID_02394 2.34e-78 - - - - - - - -
PDCPOIID_02395 0.0 cycA - - E ko:K03293,ko:K11737 - ko00000,ko02000 Amino acid permease
PDCPOIID_02396 7.51e-191 arbV - - I - - - Phosphate acyltransferases
PDCPOIID_02397 1.17e-211 arbx - - M - - - Glycosyl transferase family 8
PDCPOIID_02398 1.63e-233 arbY - - M - - - family 8
PDCPOIID_02399 2.18e-212 arbZ - - I - - - Phosphate acyltransferases
PDCPOIID_02400 0.0 rafA 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 alpha-galactosidase
PDCPOIID_02403 3.56e-68 crcB - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDCPOIID_02404 7.54e-90 crcB1 - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDCPOIID_02407 2.14e-280 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PDCPOIID_02408 9.39e-284 - - - P - - - Cation transporter/ATPase, N-terminus
PDCPOIID_02409 1.99e-212 phnD - - P ko:K02044 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphonate ABC transporter
PDCPOIID_02410 1.49e-178 phnC 3.6.3.28 - P ko:K02041 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PDCPOIID_02411 2.46e-174 phnB - - P ko:K02042 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PDCPOIID_02412 3.27e-187 ptxC - - P ko:K02042 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PDCPOIID_02414 3.09e-218 menA 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 1,4-dihydroxy-2-naphthoate
PDCPOIID_02415 2.34e-214 menA 2.5.1.74 - M ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 UbiA prenyltransferase family
PDCPOIID_02416 2.2e-252 apbE 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PDCPOIID_02417 6.86e-187 cad - - S ko:K20379 ko02024,map02024 ko00000,ko00001 FMN_bind
PDCPOIID_02418 0.0 ndh 1.6.99.3 - C ko:K03885 ko00190,map00190 ko00000,ko00001,ko01000 NADH dehydrogenase
PDCPOIID_02419 2.76e-104 - - - S - - - NusG domain II
PDCPOIID_02420 1.03e-127 hepA 2.5.1.30 - S ko:K00805 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Heptaprenyl diphosphate synthase component I
PDCPOIID_02421 1.05e-228 hepT 2.5.1.30, 2.5.1.83 - H ko:K00805,ko:K21275 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Belongs to the FPP GGPP synthase family
PDCPOIID_02423 2.3e-158 - 1.5.1.40 - S ko:K06988 - ko00000,ko01000 Rossmann-like domain
PDCPOIID_02424 1.48e-248 XK27_00915 - - C - - - Luciferase-like monooxygenase
PDCPOIID_02426 5.04e-127 yacP - - S ko:K06962 - ko00000 YacP-like NYN domain
PDCPOIID_02427 2.21e-181 trmH 2.1.1.185 - J ko:K03218 - ko00000,ko01000,ko03009 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDCPOIID_02428 4.83e-98 mrnC - - J ko:K11145 - ko00000,ko01000,ko03009 Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PDCPOIID_02429 0.0 cysS 6.1.1.16 - J ko:K01883 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
PDCPOIID_02430 1.43e-69 yciB - - M - - - ErfK YbiS YcfS YnhG
PDCPOIID_02432 0.0 gltD 1.4.1.13, 1.4.1.14 - E ko:K00266 ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
PDCPOIID_02433 0.0 gltA 1.4.1.13, 1.4.1.14, 1.4.7.1 - E ko:K00265,ko:K00284 ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 GXGXG motif
PDCPOIID_02434 1.63e-111 queT - - S - - - QueT transporter
PDCPOIID_02435 5.68e-83 ndoA - - L ko:K07171 - ko00000,ko01000,ko02048 Toxic component of a toxin-antitoxin (TA) module
PDCPOIID_02436 4.66e-44 - - - - - - - -
PDCPOIID_02437 5.42e-276 alr 5.1.1.1 - E ko:K01775 ko00473,ko01100,ko01502,map00473,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PDCPOIID_02438 2.63e-82 acpS 2.7.8.7 - I ko:K00997 ko00770,map00770 ko00000,ko00001,ko01000 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PDCPOIID_02439 0.0 cshA 3.6.4.13 - F ko:K05592 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PDCPOIID_02441 0.0 murF 6.3.2.10 - M ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PDCPOIID_02442 1.7e-187 - - - - - - - -
PDCPOIID_02443 1.25e-158 - - - S - - - Tetratricopeptide repeat
PDCPOIID_02444 4.33e-162 - - - - - - - -
PDCPOIID_02445 2.29e-87 - - - - - - - -
PDCPOIID_02446 0.0 - - - M - - - domain protein
PDCPOIID_02447 0.0 - - - M - - - domain protein
PDCPOIID_02449 9.87e-70 - - - S - - - Bacterial protein of unknown function (DUF961)
PDCPOIID_02450 9.96e-82 - - - S - - - Bacterial protein of unknown function (DUF961)
PDCPOIID_02455 0.0 - - - D ko:K03466 - ko00000,ko03036 FtsK/SpoIIIE family
PDCPOIID_02459 2.82e-292 - - - K ko:K07467 - ko00000 Replication initiation factor
PDCPOIID_02460 6.4e-72 - - - - - - - -
PDCPOIID_02461 1.87e-107 - - - L - - - DNA methylase
PDCPOIID_02462 1.84e-41 - - - S - - - Psort location CytoplasmicMembrane, score
PDCPOIID_02463 1.66e-116 - - - S - - - Antirestriction protein (ArdA)
PDCPOIID_02464 1.4e-90 - - - S - - - TcpE family
PDCPOIID_02465 0.0 - - - S - - - AAA-like domain
PDCPOIID_02466 0.0 - - - M - - - Psort location CytoplasmicMembrane, score
PDCPOIID_02467 4.37e-240 yddH - - M - - - NlpC/P60 family
PDCPOIID_02468 1.34e-130 - - - - - - - -
PDCPOIID_02469 4.56e-214 - - - S - - - Conjugative transposon protein TcpC
PDCPOIID_02471 8.9e-287 - - - S - - - COG0790 FOG TPR repeat, SEL1 subfamily
PDCPOIID_02478 2.01e-243 - - - M ko:K21471,ko:K21472 - ko00000,ko01000,ko01002,ko01011 cysteine-type peptidase activity
PDCPOIID_02479 0.0 - - - S - - - COG0433 Predicted ATPase
PDCPOIID_02480 2.63e-136 - - - - - - - -
PDCPOIID_02482 0.0 - - - S - - - domain, Protein
PDCPOIID_02483 0.0 - - - U ko:K03205 ko03070,map03070 ko00000,ko00001,ko00002,ko02044 TraM recognition site of TraD and TraG
PDCPOIID_02486 5.2e-291 - - - M - - - Domain of unknown function (DUF5011)
PDCPOIID_02487 1e-259 - - - - - - - -
PDCPOIID_02488 6.78e-42 - - - - - - - -
PDCPOIID_02502 8.21e-89 repA - - S - - - Replication initiator protein A
PDCPOIID_02503 1.65e-72 - - - D - - - Cellulose biosynthesis protein BcsQ
PDCPOIID_02506 8.88e-216 polYB 2.7.7.7 - L ko:K02346,ko:K03502 - ko00000,ko01000,ko03400 Belongs to the DNA polymerase type-Y family
PDCPOIID_02509 5.11e-97 - - - - - - - -
PDCPOIID_02510 3.82e-168 yeaZ 2.3.1.234 - O ko:K01409,ko:K14742 - ko00000,ko01000,ko03016 Universal bacterial protein YeaZ
PDCPOIID_02511 2.42e-129 rimI 2.3.1.128 - K ko:K03789 - ko00000,ko01000,ko03009 Ribosomal-protein-alanine acetyltransferase
PDCPOIID_02512 5.99e-243 tsaD 2.3.1.234 - J ko:K01409 - ko00000,ko01000,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PDCPOIID_02513 3.12e-68 ptcB 2.7.1.196, 2.7.1.205 - G ko:K02760 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
PDCPOIID_02514 0.0 ydiF - - S ko:K06158 - ko00000,ko03012 ABC transporter, ATP-binding protein
PDCPOIID_02515 1.1e-151 rex - - K ko:K01926 - ko00000,ko03000 Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PDCPOIID_02516 4.97e-81 ytrA - - K ko:K07979 - ko00000,ko03000 helix_turn_helix gluconate operon transcriptional repressor
PDCPOIID_02517 2.31e-182 - - - V ko:K01990,ko:K16921 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PDCPOIID_02518 1.63e-236 - - - - - - - -
PDCPOIID_02519 4.11e-251 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
PDCPOIID_02520 7.12e-142 ydiL - - S ko:K07052 - ko00000 CAAX protease self-immunity
PDCPOIID_02521 1.7e-59 groS - - O ko:K04078 - ko00000,ko03029,ko03110 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PDCPOIID_02522 0.0 groL - - O ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PDCPOIID_02523 5.32e-75 - - - S - - - Domain of unknown function (DUF1827)
PDCPOIID_02524 0.0 ydaO - - E - - - amino acid
PDCPOIID_02525 0.0 mutS - - L ko:K03555 ko03430,map03430 ko00000,ko00001,ko03400 that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PDCPOIID_02526 0.0 mutL - - L ko:K03572 ko03430,map03430 ko00000,ko00001,ko03400 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PDCPOIID_02527 1.67e-128 maf - - D ko:K06287 - ko00000 nucleoside-triphosphate diphosphatase activity
PDCPOIID_02528 8.38e-80 - - - S - - - Domain of unknown function (DUF4811)
PDCPOIID_02529 0.0 ycnB - - U - - - Belongs to the major facilitator superfamily
PDCPOIID_02530 0.0 yhdP - - S - - - Transporter associated domain
PDCPOIID_02531 4.29e-173 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2263)
PDCPOIID_02532 5.53e-151 - - - F - - - glutamine amidotransferase
PDCPOIID_02533 7.03e-138 - - - T - - - Sh3 type 3 domain protein
PDCPOIID_02534 9.28e-158 azlC - - E - - - branched-chain amino acid
PDCPOIID_02535 1.83e-66 azlD - - S - - - Branched-chain amino acid transport protein (AzlD)
PDCPOIID_02537 2.66e-35 - - - - - - - -
PDCPOIID_02538 4.53e-185 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
PDCPOIID_02539 6.9e-150 eda 4.1.2.14, 4.1.3.42 - G ko:K01625 ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 KDPG and KHG aldolase
PDCPOIID_02540 1.82e-161 kdgR - - K - - - FCD domain
PDCPOIID_02542 5.52e-71 ps105 - - - - - - -
PDCPOIID_02543 1.08e-54 - - - K - - - Transcriptional activator, Rgg GadR MutR family
PDCPOIID_02544 5.44e-100 - - - K - - - Transcriptional activator, Rgg GadR MutR family
PDCPOIID_02545 5.8e-130 - - - V ko:K06147,ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
PDCPOIID_02546 3.54e-176 ypaC - - Q - - - Methyltransferase domain
PDCPOIID_02547 0.0 - - - S - - - ABC transporter
PDCPOIID_02548 2.78e-222 draG - - O - - - ADP-ribosylglycohydrolase
PDCPOIID_02549 7.27e-139 lepB 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
PDCPOIID_02550 4.42e-54 - - - - - - - -
PDCPOIID_02551 1.31e-172 - - - S - - - Protein of unknown function (DUF975)
PDCPOIID_02552 2.32e-188 - - - M - - - Glycosyltransferase like family 2
PDCPOIID_02553 7.68e-174 glcR - - K ko:K22103 - ko00000,ko03000 DeoR C terminal sensor domain
PDCPOIID_02554 1.15e-101 - - - T - - - Sh3 type 3 domain protein
PDCPOIID_02555 2.7e-200 - - - K - - - Helix-turn-helix XRE-family like proteins
PDCPOIID_02556 2.86e-108 uspA - - T - - - universal stress protein
PDCPOIID_02557 1.65e-52 - - - - - - - -
PDCPOIID_02559 1.37e-305 rarA - - L ko:K07478 - ko00000 recombination factor protein RarA
PDCPOIID_02560 0.0 gshAB 6.3.2.2 - H ko:K01919 ko00270,ko00480,ko01100,map00270,map00480,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the glutamate--cysteine ligase type 1 family
PDCPOIID_02561 2.76e-99 XK27_05190 - - S - - - Protein of unknown function (DUF1694)
PDCPOIID_02562 5.99e-141 yktB - - S - - - Belongs to the UPF0637 family
PDCPOIID_02563 1.02e-158 sdaAB 4.3.1.17 - E ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko01000 Serine dehydratase beta chain
PDCPOIID_02564 4.62e-193 sdaAA 4.3.1.17 - E ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko01000 L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PDCPOIID_02565 7.71e-157 - - - G - - - alpha-ribazole phosphatase activity
PDCPOIID_02566 1.15e-196 mrsA1 1.8.4.11 - O ko:K07304 - ko00000,ko01000 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PDCPOIID_02567 2.87e-219 - - - IQ - - - NAD dependent epimerase/dehydratase family
PDCPOIID_02568 2.93e-178 pnuC - - H ko:K03811 - ko00000,ko02000 nicotinamide mononucleotide transporter
PDCPOIID_02569 2.05e-173 - - - F - - - deoxynucleoside kinase
PDCPOIID_02570 8.16e-203 hisK 3.1.3.15 - E ko:K04486 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Histidinol phosphatase and related hydrolases of the PHP family
PDCPOIID_02571 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
PDCPOIID_02572 1.44e-201 - - - T - - - GHKL domain
PDCPOIID_02573 1.74e-152 - - - T - - - Transcriptional regulatory protein, C terminal
PDCPOIID_02574 9.74e-205 - - - S - - - Bacterial protein of unknown function (DUF916)
PDCPOIID_02575 3.37e-250 - - - S - - - Protein of unknown function C-terminal (DUF3324)
PDCPOIID_02576 0.0 - - - S - - - Leucine-rich repeat (LRR) protein
PDCPOIID_02577 0.0 ftsH - - O ko:K03798 - ko00000,ko00002,ko01000,ko01002,ko03110 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PDCPOIID_02578 1.14e-124 hpt 2.4.2.8 - F ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the purine pyrimidine phosphoribosyltransferase family
PDCPOIID_02579 6.04e-307 tilS 2.4.2.8, 6.3.4.19 - J ko:K04075,ko:K15780 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000,ko03016 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PDCPOIID_02580 1.17e-105 yabR - - J ko:K07571 - ko00000 RNA binding
PDCPOIID_02581 2.92e-86 divIC - - D ko:K05589,ko:K13052 - ko00000,ko03036 cell cycle
PDCPOIID_02582 1.99e-53 yabO - - J - - - S4 domain protein
PDCPOIID_02583 0.0 yabM - - S ko:K03328 - ko00000 Polysaccharide biosynthesis protein
PDCPOIID_02584 0.0 mfd - - L ko:K03723 ko03420,map03420 ko00000,ko00001,ko01000,ko03400 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PDCPOIID_02585 1.74e-130 pth 3.1.1.29 - J ko:K01056 - ko00000,ko01000,ko03012 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PDCPOIID_02586 5.04e-232 ldh 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily. LDH family
PDCPOIID_02587 0.0 - - - S - - - Putative peptidoglycan binding domain
PDCPOIID_02588 1.34e-154 - - - S - - - (CBS) domain
PDCPOIID_02589 1.68e-57 yciB - - M - - - ErfK YbiS YcfS YnhG
PDCPOIID_02590 4.98e-216 gbuC - - E ko:K02001,ko:K02002 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 glycine betaine
PDCPOIID_02591 8.27e-189 gbuB - - E ko:K02001 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 glycine betaine
PDCPOIID_02592 2.63e-284 gbuA 3.6.3.32 - E ko:K02000 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 glycine betaine
PDCPOIID_02593 1.39e-176 sfsA - - S ko:K06206 - ko00000 Belongs to the SfsA family
PDCPOIID_02594 2.6e-96 usp1 - - T - - - Universal stress protein family
PDCPOIID_02595 0.0 yxbA 6.3.1.12 - S ko:K17810 - ko00000,ko01000 ATP-grasp enzyme
PDCPOIID_02596 1.49e-193 thrB 2.7.1.39 - F ko:K00872 ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PDCPOIID_02597 0.0 thrC 4.2.3.1 - E ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Threonine synthase
PDCPOIID_02598 1.13e-290 hom 1.1.1.3 - E ko:K00003 ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 homoserine dehydrogenase
PDCPOIID_02599 0.0 - 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the aspartokinase family
PDCPOIID_02600 1.52e-268 floL - - S ko:K07192 ko04910,map04910 ko00000,ko00001,ko03036,ko04131,ko04147 SPFH domain / Band 7 family
PDCPOIID_02601 1.32e-51 - - - - - - - -
PDCPOIID_02602 1.23e-221 pfoSR - - S ko:K07035 - ko00000 Phosphotransferase system, EIIC
PDCPOIID_02603 1.24e-226 ldhD 1.1.1.28 - CH ko:K03778 ko00620,ko01120,map00620,map01120 ko00000,ko00001,ko01000 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDCPOIID_02604 9.39e-277 aspC 2.6.1.57 - E ko:K00832,ko:K00841 ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
PDCPOIID_02605 3.6e-67 - - - - - - - -
PDCPOIID_02606 6.09e-162 WQ51_05710 - - S - - - Mitochondrial biogenesis AIM24
PDCPOIID_02607 3.28e-93 - - - FG ko:K02503 - ko00000,ko04147 Scavenger mRNA decapping enzyme C-term binding
PDCPOIID_02608 0.0 asnB 6.3.5.4 - E ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 ko00000,ko00001,ko01000,ko01002 Asparagine synthase
PDCPOIID_02610 6.08e-256 - - - S - - - Calcineurin-like phosphoesterase
PDCPOIID_02611 4.63e-201 menA 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 1,4-dihydroxy-2-naphthoate
PDCPOIID_02612 1.55e-224 hepT 2.5.1.30 - H ko:K00805 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Belongs to the FPP GGPP synthase family
PDCPOIID_02613 1.11e-282 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PDCPOIID_02614 9.96e-212 ysdB - - S ko:K01990 - ko00000,ko00002,ko02000 abc transporter atp-binding protein
PDCPOIID_02615 3.4e-276 ysdA - - CP ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
PDCPOIID_02616 6.81e-86 ytrA - - K ko:K07979 - ko00000,ko03000 helix_turn_helix gluconate operon transcriptional repressor
PDCPOIID_02617 9.19e-209 CcmA - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
PDCPOIID_02618 1.28e-144 - - - I - - - ABC-2 family transporter protein
PDCPOIID_02619 5.43e-185 gdh 1.1.1.47 - IQ ko:K00034 ko00030,ko01120,ko01200,map00030,map01120,map01200 ko00000,ko00001,ko01000 reductase
PDCPOIID_02620 2.4e-256 ald1 1.4.1.1 - C ko:K00259 ko00250,ko00430,ko01100,map00250,map00430,map01100 ko00000,ko00001,ko01000 Belongs to the AlaDH PNT family
PDCPOIID_02621 1.51e-238 ilvA 4.3.1.19 - E ko:K01754 ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
PDCPOIID_02622 0.0 - - - S - - - OPT oligopeptide transporter protein
PDCPOIID_02623 1.97e-81 - - - S - - - Coenzyme PQQ synthesis protein D (PqqD)
PDCPOIID_02624 5.81e-70 pepD3 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
PDCPOIID_02625 8.74e-264 pepD3 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
PDCPOIID_02626 0.0 gshR3 1.8.1.7 - C ko:K00383 ko00480,ko04918,map00480,map04918 ko00000,ko00001,ko01000 Glutathione reductase
PDCPOIID_02627 2.55e-315 lmrB - - U ko:K18926 - ko00000,ko00002,ko02000 Belongs to the major facilitator superfamily

eggNOG-mapper v2.1.12 (Database: eggNOG v5.0.2, Mar. 2021 release)