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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
PHCCMDOK_00001	2.89e-100	-	-	-	S	-	-	-	glyoxalase bleomycin resistance protein dioxygenase
PHCCMDOK_00002	2.47e-308	-	-	-	C	-	-	-	Na+/H+ antiporter family
PHCCMDOK_00003	2e-239	dapB	1.4.1.12, 1.4.1.26	-	S	ko:K21672	ko00310,ko00330,ko00472,map00310,map00330,map00472	ko00000,ko00001,ko01000	Dihydrodipicolinate reductase, N-terminus
PHCCMDOK_00004	6.48e-216	-	-	-	K	-	-	-	LysR substrate binding domain
PHCCMDOK_00005	2.11e-82	-	-	-	S	ko:K06880	-	ko00000,ko01000,ko01504	Erythromycin esterase
PHCCMDOK_00006	7.26e-166	-	-	-	K	ko:K03088	-	ko00000,ko03021	TIGRFAM RNA polymerase sigma factor, sigma-70 family
PHCCMDOK_00007	3.59e-49	ydfG	-	-	S	-	-	-	Carboxymuconolactone decarboxylase family
PHCCMDOK_00008	4.34e-104	azoR	-	-	I	ko:K01118	-	ko00000,ko01000	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PHCCMDOK_00009	1.06e-74	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PHCCMDOK_00010	8.81e-79	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PHCCMDOK_00011	7.17e-150	-	-	-	C	-	-	-	Nitroreductase family
PHCCMDOK_00012	4.45e-26	yisL	-	-	S	-	-	-	UPF0344 protein
PHCCMDOK_00013	6.02e-110	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PHCCMDOK_00014	5.57e-143	XK27_07680	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PHCCMDOK_00015	1.27e-230	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PHCCMDOK_00016	1.82e-188	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	Type I restriction-modification system
PHCCMDOK_00017	2.79e-252	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	Type I restriction-modification system
PHCCMDOK_00018	3.44e-107	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	PFAM restriction modification system DNA specificity domain
PHCCMDOK_00019	0.0	hsdR	3.1.21.3	-	L	ko:K01153	-	ko00000,ko01000,ko02048	Type I restriction enzyme R protein N terminus (HSDR_N)
PHCCMDOK_00020	6.62e-260	yvmA	-	-	EGP	-	-	-	Major Facilitator Superfamily
PHCCMDOK_00021	4.49e-97	rmaD	-	-	K	-	-	-	Iron dependent repressor, N-terminal DNA binding domain
PHCCMDOK_00022	1.56e-84	M1-431	-	-	S	-	-	-	Protein of unknown function (DUF1706)
PHCCMDOK_00023	4.54e-224	dhaK	2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15	-	G	ko:K00863,ko:K05878	ko00051,ko00561,ko00680,ko01100,ko01120,ko01200,ko04622,map00051,map00561,map00680,map01100,map01120,map01200,map04622	ko00000,ko00001,ko00002,ko01000	Dihydroxyacetone kinase DhaK, subunit
PHCCMDOK_00024	1.02e-136	dhaL	2.7.1.121	-	S	ko:K05879	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak2
PHCCMDOK_00025	8.02e-84	-	2.7.1.121	-	S	ko:K05881	ko00561,map00561	ko00000,ko00001,ko01000,ko02000	PTS system fructose IIA component
PHCCMDOK_00026	2.83e-31	-	-	-	S	-	-	-	YfhD-like protein
PHCCMDOK_00027	1.68e-275	-	-	-	G	-	-	-	Transmembrane secretion effector
PHCCMDOK_00028	2.03e-221	-	-	-	S	-	-	-	Phosphotransferase enzyme family
PHCCMDOK_00029	1.51e-87	-	-	-	-	-	-	-	-
PHCCMDOK_00030	1.2e-284	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
PHCCMDOK_00031	0.0	-	-	-	S	-	-	-	proteins of the AP superfamily
PHCCMDOK_00032	8.69e-67	yhcN	-	-	S	-	-	-	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PHCCMDOK_00033	1.28e-190	ykoQ	-	-	S	ko:K07098	-	ko00000	Calcineurin-like phosphoesterase superfamily domain
PHCCMDOK_00034	1.17e-215	-	-	-	E	ko:K00318	ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130	ko00000,ko00001,ko01000	Proline dehydrogenase
PHCCMDOK_00035	0.0	-	-	-	KT	-	-	-	Transcriptional regulator
PHCCMDOK_00036	0.0	rocA	1.2.1.88	-	C	ko:K00294	ko00250,ko00330,ko01100,map00250,map00330,map01100	ko00000,ko00001,ko01000	Belongs to the aldehyde dehydrogenase family. RocA subfamily
PHCCMDOK_00038	0.0	-	3.1.3.5, 3.6.1.45	-	F	ko:K01081,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	COG0737 5'-nucleotidase 2',3'-cyclic phosphodiesterase and related esterases
PHCCMDOK_00039	1.3e-36	-	-	-	K	ko:K07729	-	ko00000,ko03000	Transcriptional regulator
PHCCMDOK_00040	1.4e-98	ygaO	-	-	-	-	-	-	-
PHCCMDOK_00041	2.6e-57	-	-	-	Q	-	-	-	Isochorismatase family
PHCCMDOK_00042	0.0	htpG	-	-	O	ko:K04079	ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418	ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147	Molecular chaperone. Has ATPase activity
PHCCMDOK_00043	0.0	abgT_2	-	-	H	ko:K12942	-	ko00000	AbgT putative transporter family
PHCCMDOK_00044	3.68e-277	cypA	-	-	C	ko:K15468	-	ko00000,ko01008	Cytochrome P450
PHCCMDOK_00045	9.68e-26	-	-	-	-	-	-	-	-
PHCCMDOK_00046	0.0	-	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
PHCCMDOK_00047	1.15e-173	lutA	-	-	C	ko:K18928	-	ko00000	Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source
PHCCMDOK_00048	0.0	lutB	-	-	C	ko:K18929	-	ko00000	Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate
PHCCMDOK_00049	1.33e-158	lutC	-	-	S	ko:K00782	-	ko00000	Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source
PHCCMDOK_00050	7.2e-173	yvfI	-	-	K	ko:K05799	-	ko00000,ko03000	COG2186 Transcriptional regulators
PHCCMDOK_00051	1.08e-285	gbsB	1.1.1.1	-	C	ko:K11440	ko00260,ko01100,map00260,map01100	ko00000,ko00001,ko00002,ko01000	alcohol dehydrogenase
PHCCMDOK_00052	0.0	gbsA	1.2.1.8	-	C	ko:K00130	ko00260,ko01100,map00260,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
PHCCMDOK_00053	6.28e-130	-	-	-	K	ko:K22109	-	ko00000,ko03000	Belongs to the GbsR family
PHCCMDOK_00054	4.01e-200	-	-	-	E	ko:K02002	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Substrate binding domain of ABC-type glycine betaine transport system
PHCCMDOK_00055	3.88e-206	-	-	-	Q	-	-	-	calcium- and calmodulin-responsive adenylate cyclase activity
PHCCMDOK_00056	0.0	-	-	-	M	-	-	-	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
PHCCMDOK_00057	4.38e-134	yhcS	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	COG3764 Sortase (surface protein transpeptidase)
PHCCMDOK_00058	3.76e-64	-	-	-	K	ko:K02538	-	ko00000,ko03000	transcriptional antiterminator
PHCCMDOK_00059	4.94e-143	-	-	-	K	ko:K02538	-	ko00000,ko03000	transcriptional antiterminator
PHCCMDOK_00060	1.87e-87	-	-	-	K	ko:K02538	-	ko00000,ko03000	transcriptional antiterminator
PHCCMDOK_00061	0.0	lipA1	-	-	S	-	-	-	acetyltransferases and hydrolases with the alpha beta hydrolase fold
PHCCMDOK_00062	2.36e-145	mqnB	3.2.2.26	-	F	ko:K11783	ko00130,ko01110,map00130,map01110	ko00000,ko00001,ko01000	Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2)
PHCCMDOK_00063	7.23e-200	mqnD	-	-	S	ko:K11785	ko00130,ko01110,map00130,map01110	ko00000,ko00001,ko01000	Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
PHCCMDOK_00064	7.26e-133	ywrB	-	-	P	ko:K07240	-	ko00000,ko02000	COG2059 Chromate transport protein ChrA
PHCCMDOK_00065	2.56e-111	-	-	-	P	ko:K07240	-	ko00000,ko02000	COG2059 Chromate transport protein ChrA
PHCCMDOK_00066	2.19e-168	-	-	-	K	-	-	-	DeoR C terminal sensor domain
PHCCMDOK_00067	1.17e-167	kduD	1.1.1.127	-	IQ	ko:K00065	ko00040,map00040	ko00000,ko00001,ko01000	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PHCCMDOK_00068	1.85e-202	kduI	5.3.1.17	-	G	ko:K01815	ko00040,map00040	ko00000,ko00001,ko01000	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
PHCCMDOK_00069	0.0	uxaC	5.3.1.12	-	G	ko:K01812	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	glucuronate isomerase
PHCCMDOK_00070	3.58e-148	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PHCCMDOK_00071	3.1e-168	mta	-	-	K	-	-	-	transcriptional
PHCCMDOK_00072	2.44e-266	bcsA	-	-	Q	ko:K16167	-	ko00000,ko01008	Naringenin-chalcone synthase
PHCCMDOK_00073	2.79e-126	ypbQ	-	-	S	ko:K16168	-	ko00000,ko01008	protein conserved in bacteria
PHCCMDOK_00076	5.26e-297	-	-	-	G	-	-	-	Major facilitator Superfamily
PHCCMDOK_00077	0.0	yheI	-	-	V	ko:K18216,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko01504,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
PHCCMDOK_00078	0.0	yheH	-	-	V	ko:K18217,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko01504,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
PHCCMDOK_00079	0.0	yvgP	-	-	P	ko:K03316	-	ko00000	COG0025 NhaP-type Na H and K H antiporters
PHCCMDOK_00080	0.0	-	2.7.13.3	-	T	ko:K02476,ko:K11614,ko:K11637	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Signal transduction histidine kinase regulating citrate malate metabolism
PHCCMDOK_00081	3.15e-154	citT	-	-	T	ko:K11638	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
PHCCMDOK_00082	3.73e-239	-	-	-	S	ko:K07795	ko02020,map02020	ko00000,ko00001,ko02000	Tripartite tricarboxylate transporter family receptor
PHCCMDOK_00083	7.13e-89	-	-	-	S	ko:K07794	ko02020,map02020	ko00000,ko00001,ko02000	Tripartite tricarboxylate transporter TctB family
PHCCMDOK_00084	0.0	-	-	-	S	ko:K07793	ko02020,map02020	ko00000,ko00001,ko02000	Tripartite tricarboxylate transporter TctA family
PHCCMDOK_00085	1.84e-07	-	-	-	T	-	-	-	SpoVT / AbrB like domain
PHCCMDOK_00086	2.1e-90	-	-	-	S	ko:K07341	-	ko00000,ko02048	Fic/DOC family
PHCCMDOK_00088	1.02e-42	yebG	-	-	S	-	-	-	NETI protein
PHCCMDOK_00089	9.63e-88	-	-	-	S	-	-	-	Calcium/calmodulin dependent protein kinase II association domain
PHCCMDOK_00090	1.5e-128	-	-	-	-	-	-	-	-
PHCCMDOK_00091	3.32e-154	-	-	-	S	-	-	-	PFAM AIG2 family protein
PHCCMDOK_00092	6.57e-125	ydaF	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
PHCCMDOK_00093	1.27e-164	-	-	-	S	-	-	-	CAAX protease self-immunity
PHCCMDOK_00094	2.26e-104	purE	5.4.99.18	-	F	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PHCCMDOK_00095	1.17e-269	purK	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PHCCMDOK_00096	1.92e-316	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PHCCMDOK_00097	1.13e-164	purC	6.3.2.6	-	F	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the SAICAR synthetase family
PHCCMDOK_00098	5.87e-51	purS	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PHCCMDOK_00099	6.66e-167	purQ	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PHCCMDOK_00100	0.0	purL	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PHCCMDOK_00101	0.0	purF	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PHCCMDOK_00102	9.28e-249	purM	6.3.3.1	-	F	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoribosylformylglycinamidine cyclo-ligase
PHCCMDOK_00103	2.24e-126	purN	2.1.2.2	-	F	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PHCCMDOK_00104	0.0	purH	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	Bifunctional purine biosynthesis protein PurH
PHCCMDOK_00105	3.68e-294	purD	6.3.4.13	-	F	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the GARS family
PHCCMDOK_00106	4.68e-259	-	3.4.17.11	-	E	ko:K01295	-	ko00000,ko01000,ko01002	Peptidase dimerisation domain
PHCCMDOK_00107	2e-196	fhuD9	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
PHCCMDOK_00108	6.18e-115	ttr	-	-	K	-	-	-	GCN5 family acetyltransferase
PHCCMDOK_00109	1.18e-253	-	-	-	T	-	-	-	Signal transduction histidine kinase
PHCCMDOK_00110	3.54e-140	-	-	-	KT	-	-	-	LuxR family transcriptional regulator
PHCCMDOK_00111	1.66e-217	yfiL	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	COG1131 ABC-type multidrug transport system, ATPase component
PHCCMDOK_00112	2.5e-278	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	COG0842 ABC-type multidrug transport system, permease component
PHCCMDOK_00113	1.51e-237	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	COG0842 ABC-type multidrug transport system, permease component
PHCCMDOK_00115	1.73e-59	yvrO	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
PHCCMDOK_00120	3e-39	-	-	-	S	-	-	-	Domain of unknown function (DUF5082)
PHCCMDOK_00121	8.77e-39	-	-	-	S	-	-	-	Family of unknown function (DUF5344)
PHCCMDOK_00122	2.05e-310	-	-	-	S	-	-	-	LXG domain of WXG superfamily
PHCCMDOK_00123	1.03e-76	-	-	-	-	-	-	-	-
PHCCMDOK_00124	3.07e-75	-	-	-	U	ko:K21493	-	ko00000,ko01000,ko02048	LXG domain of WXG superfamily
PHCCMDOK_00125	2.44e-105	-	-	-	S	ko:K21490	-	ko00000,ko02048	SMI1 / KNR4 family (SUKH-1)
PHCCMDOK_00126	7.81e-37	-	-	-	T	-	-	-	Protein conserved in bacteria
PHCCMDOK_00127	5.82e-50	-	-	-	-	-	-	-	-
PHCCMDOK_00128	3.92e-54	-	-	-	-	-	-	-	-
PHCCMDOK_00129	8.54e-212	ydhU	-	-	P	ko:K07217	-	ko00000	Catalase
PHCCMDOK_00131	1.5e-187	-	-	-	S	-	-	-	Nucleotidyltransferase domain
PHCCMDOK_00133	1.59e-25	-	-	-	-	-	-	-	-
PHCCMDOK_00134	2.3e-161	bshB1	-	-	S	ko:K01463	-	ko00000,ko01000	proteins, LmbE homologs
PHCCMDOK_00135	8.93e-246	bshA	-	GT4	M	ko:K00754	-	ko00000,ko01000	N-acetyl-alpha-D-glucosaminyl L-malate synthase
PHCCMDOK_00136	1.71e-246	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PHCCMDOK_00137	4.28e-226	birA	6.3.4.15	-	K	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PHCCMDOK_00138	3.14e-191	panB	2.1.2.11	-	H	ko:K00606	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate
PHCCMDOK_00139	1.64e-209	panC	6.3.2.1	-	H	ko:K01918	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
PHCCMDOK_00140	8.4e-85	panD	4.1.1.11	-	H	ko:K01579	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
PHCCMDOK_00141	1.01e-223	-	-	-	S	-	-	-	Tetratricopeptide repeat
PHCCMDOK_00142	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
PHCCMDOK_00143	1.96e-311	mtaD	3.5.4.28, 3.5.4.31	-	F	ko:K12960	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine
PHCCMDOK_00145	8.74e-32	ypmA	-	-	S	-	-	-	Protein of unknown function (DUF4264)
PHCCMDOK_00146	1.59e-104	ypmB	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_00147	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	asparaginyl-tRNA
PHCCMDOK_00148	1.38e-162	dnaD	-	-	L	ko:K02086	-	ko00000	DNA replication protein DnaD
PHCCMDOK_00149	1.45e-157	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PHCCMDOK_00150	0.0	ypbR	-	-	S	-	-	-	Dynamin family
PHCCMDOK_00151	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
PHCCMDOK_00152	1.41e-149	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PHCCMDOK_00153	2.05e-202	yppC	-	-	S	-	-	-	Protein of unknown function (DUF2515)
PHCCMDOK_00155	1.29e-111	racA	-	-	K	ko:K11686	-	ko00000,ko03036	Required for the formation of axial filaments and for anchoring the origin regions at the cell poles in sporulating cells, thus ensuring proper chromosome segregation in the prespore. Binds in a dispersed manner throughout the chromosome but preferentially to sites clustered in the origin portion of the chromosome, causing condensation of the chromosome and its remodeling into an elongated, anchored structure
PHCCMDOK_00156	9.46e-67	yppE	-	-	S	-	-	-	Bacterial domain of unknown function (DUF1798)
PHCCMDOK_00157	2.9e-26	-	-	-	-	-	-	-	-
PHCCMDOK_00158	7.48e-299	ilvA	4.3.1.19	-	E	ko:K01754	ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
PHCCMDOK_00159	5.49e-124	yraA	3.5.1.124	-	S	ko:K05520	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
PHCCMDOK_00160	1.16e-214	rnz	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PHCCMDOK_00161	3.7e-70	yusE	-	-	CO	-	-	-	cell redox homeostasis
PHCCMDOK_00162	3.12e-100	yphP	-	-	S	-	-	-	Belongs to the UPF0403 family
PHCCMDOK_00163	6.98e-95	-	-	-	CO	-	-	-	Thioredoxin-like
PHCCMDOK_00164	4.86e-176	-	-	-	T	-	-	-	Calcineurin-like phosphoesterase superfamily domain
PHCCMDOK_00165	2.63e-195	ypgR	-	-	C	-	-	-	COG0694 Thioredoxin-like proteins and domains
PHCCMDOK_00166	2.16e-39	-	-	-	-	-	-	-	-
PHCCMDOK_00167	5.84e-110	ydbS	-	-	S	ko:K09167	-	ko00000	Bacterial PH domain
PHCCMDOK_00168	8.45e-304	ydbT	-	-	S	ko:K08981	-	ko00000	Membrane
PHCCMDOK_00169	2.09e-244	-	-	-	S	-	-	-	Protein of unknown function (DUF2777)
PHCCMDOK_00170	1.34e-209	-	-	-	-	-	-	-	-
PHCCMDOK_00171	1.12e-196	telA	-	-	P	-	-	-	Belongs to the TelA family
PHCCMDOK_00173	0.0	gltA	1.4.1.13, 1.4.1.14, 1.4.7.1	-	E	ko:K00265,ko:K00284	ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	glutamate synthase
PHCCMDOK_00174	0.0	gltD	1.4.1.13, 1.4.1.14	-	E	ko:K00266	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases
PHCCMDOK_00175	1.16e-146	ypjP	-	-	S	-	-	-	YpjP-like protein
PHCCMDOK_00176	8.96e-51	-	-	-	-	-	-	-	-
PHCCMDOK_00178	1.54e-80	kapB	-	-	G	ko:K06347	ko02020,map02020	ko00000,ko00001	Kinase associated protein B
PHCCMDOK_00179	1.43e-198	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PHCCMDOK_00180	2.9e-05	-	-	-	S	ko:K06376	-	ko00000	Spo0E like sporulation regulatory protein
PHCCMDOK_00181	1.1e-108	-	-	-	-	-	-	-	-
PHCCMDOK_00182	7.58e-188	ycsE	-	-	S	-	-	-	hydrolases of the HAD superfamily
PHCCMDOK_00183	1.31e-24	-	-	-	-	-	-	-	-
PHCCMDOK_00184	5.03e-229	ykcA	-	-	E	ko:K15975	-	ko00000	COG0346 Lactoylglutathione lyase and related lyases
PHCCMDOK_00185	5.9e-137	yahD	-	-	S	ko:K06999	-	ko00000	Carboxylesterase
PHCCMDOK_00186	2.07e-116	-	-	-	-	-	-	-	-
PHCCMDOK_00187	5.46e-259	gerAC	-	-	S	ko:K06290,ko:K06293,ko:K06312	-	ko00000	Spore germination B3/ GerAC like, C-terminal
PHCCMDOK_00188	2.3e-237	gerAB	-	-	E	ko:K06289,ko:K06292	-	ko00000,ko02000	Spore germination protein
PHCCMDOK_00189	0.0	gerAA	-	-	EG	ko:K06288,ko:K06310	-	ko00000	Spore germination protein
PHCCMDOK_00190	0.0	pepF	-	-	E	-	-	-	oligoendopeptidase F
PHCCMDOK_00191	0.0	yprA	-	-	L	ko:K06877	-	ko00000	COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster
PHCCMDOK_00192	3.28e-277	yprB	-	-	L	ko:K07502	-	ko00000	RNase_H superfamily
PHCCMDOK_00193	3.2e-07	cotD	-	-	S	ko:K06327	-	ko00000	Inner spore coat protein D
PHCCMDOK_00194	2.87e-126	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
PHCCMDOK_00195	1.53e-63	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PHCCMDOK_00196	5.79e-88	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids
PHCCMDOK_00197	5.5e-51	-	-	-	-	-	-	-	-
PHCCMDOK_00198	3.03e-278	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
PHCCMDOK_00199	1.32e-223	-	-	-	S	-	-	-	Oxidoreductase
PHCCMDOK_00200	0.0	-	2.2.1.6	-	EH	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Thiamine pyrophosphate enzyme, central domain
PHCCMDOK_00201	8.2e-81	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
PHCCMDOK_00202	8.13e-82	-	-	-	-	-	-	-	-
PHCCMDOK_00203	1.65e-212	-	-	-	NT	-	-	-	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PHCCMDOK_00204	0.0	-	-	-	L	-	-	-	COG3666 Transposase and inactivated derivatives
PHCCMDOK_00206	3.27e-255	-	-	-	S	ko:K06308	-	ko00000	Spore germination B3/ GerAC like, C-terminal
PHCCMDOK_00207	2.29e-253	-	-	-	E	-	-	-	Spore germination protein
PHCCMDOK_00208	0.0	-	-	-	P	-	-	-	Spore gernimation protein GerA
PHCCMDOK_00209	6.31e-79	-	-	-	S	-	-	-	Src homology 3 domains
PHCCMDOK_00210	3.09e-66	-	-	-	-	-	-	-	-
PHCCMDOK_00211	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
PHCCMDOK_00212	2.04e-27	-	-	-	S	-	-	-	Protein of unknown function (DUF2564)
PHCCMDOK_00214	4.29e-263	-	-	-	G	-	-	-	Transmembrane secretion effector
PHCCMDOK_00215	5.42e-107	-	-	-	Q	-	-	-	ubiE/COQ5 methyltransferase family
PHCCMDOK_00216	1.96e-69	-	-	-	S	-	-	-	Belongs to the HesB IscA family
PHCCMDOK_00217	0.0	ypwA	3.4.17.19	-	E	ko:K01299	-	ko00000,ko01000,ko01002	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
PHCCMDOK_00218	1.75e-120	-	-	-	U	-	-	-	MarC family integral membrane protein
PHCCMDOK_00219	3.79e-173	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PHCCMDOK_00220	0.0	-	-	-	GKT	ko:K03491	-	ko00000,ko03000	Mga helix-turn-helix domain
PHCCMDOK_00221	2.1e-91	-	-	-	S	ko:K07149	-	ko00000	Membrane
PHCCMDOK_00222	7.94e-61	licB2	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
PHCCMDOK_00223	4.72e-257	-	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PHCCMDOK_00224	4.51e-69	-	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIA subunit
PHCCMDOK_00225	1.07e-93	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Glycosyl hydrolase family 1
PHCCMDOK_00226	1.06e-202	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Glycosyl hydrolase family 1
PHCCMDOK_00227	2.06e-104	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Glycosyl hydrolase family 1
PHCCMDOK_00228	3.11e-214	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Glycosyl hydrolase family 1
PHCCMDOK_00229	1.76e-189	fadH	1.3.1.34	-	IQ	ko:K00219	-	ko00000,ko01000	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PHCCMDOK_00230	1.1e-235	opuBA	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1125 ABC-type proline glycine betaine transport systems, ATPase components
PHCCMDOK_00231	0.0	proWX	-	-	EM	ko:K05845,ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1174 ABC-type proline glycine betaine transport systems, permease component
PHCCMDOK_00232	1.47e-91	yneT	-	-	S	ko:K06929	-	ko00000	CoA-binding protein
PHCCMDOK_00233	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PHCCMDOK_00234	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PHCCMDOK_00235	8.76e-75	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2200)
PHCCMDOK_00236	7.67e-106	yocK	-	-	T	-	-	-	general stress protein
PHCCMDOK_00237	2.57e-255	ytvI	-	-	S	-	-	-	sporulation integral membrane protein YtvI
PHCCMDOK_00238	7.36e-172	motB	-	-	N	ko:K02557	ko02030,ko02040,map02030,map02040	ko00000,ko00001,ko02000,ko02035	Flagellar motor protein
PHCCMDOK_00239	2.45e-178	motA	-	-	N	ko:K02556	ko02020,ko02030,ko02040,map02020,map02030,map02040	ko00000,ko00001,ko02000,ko02035	flagellar motor
PHCCMDOK_00240	1.61e-191	yqfU	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2179)
PHCCMDOK_00241	1.98e-139	-	-	-	S	-	-	-	Golgi phosphoprotein 3 (GPP34)
PHCCMDOK_00242	1.43e-48	-	-	-	K	-	-	-	COG0202 DNA-directed RNA polymerase, alpha subunit 40 kD subunit
PHCCMDOK_00243	6.47e-132	ydeI	-	-	S	-	-	-	Bacteriocin-protection, YdeI or OmpD-Associated
PHCCMDOK_00244	2.07e-113	-	-	-	C	-	-	-	HEAT repeats
PHCCMDOK_00245	9.65e-59	-	-	-	S	-	-	-	Belongs to the LOG family
PHCCMDOK_00246	7.73e-88	-	-	-	S	-	-	-	Bacterial PH domain
PHCCMDOK_00247	4.19e-190	-	3.4.11.5	-	I	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Alpha beta hydrolase
PHCCMDOK_00249	8.05e-18	-	-	-	GM	-	-	-	NAD dependent epimerase/dehydratase family
PHCCMDOK_00250	2.31e-41	yfiT	-	-	S	-	-	-	Belongs to the metal hydrolase YfiT family
PHCCMDOK_00251	2.64e-75	-	-	-	E	-	-	-	LysE type translocator
PHCCMDOK_00252	3.35e-128	-	-	-	K	-	-	-	AraC family transcriptional regulator
PHCCMDOK_00253	7.29e-18	-	-	-	-	-	-	-	-
PHCCMDOK_00255	2.4e-119	sigY	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PHCCMDOK_00256	2.03e-177	yxlG	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
PHCCMDOK_00257	2.68e-200	yxlF	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PHCCMDOK_00258	6.76e-16	yxlE	-	-	S	-	-	-	Phospholipase_D-nuclease N-terminal
PHCCMDOK_00259	1.77e-102	-	-	-	S	-	-	-	Domain of unknown function (DUF4188)
PHCCMDOK_00260	2.95e-117	-	-	-	K	-	-	-	Virulence activator alpha C-term
PHCCMDOK_00261	1.78e-195	-	-	-	K	ko:K13653	-	ko00000,ko03000	AraC family transcriptional regulator
PHCCMDOK_00262	1.14e-94	-	-	-	S	-	-	-	Activator of Hsp90 ATPase homolog 1-like protein
PHCCMDOK_00263	0.0	pbp1B	2.4.1.129	GT51	M	ko:K03693,ko:K12551	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	COG0744 Membrane carboxypeptidase (penicillin-binding protein)
PHCCMDOK_00264	3.55e-297	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PHCCMDOK_00265	4.92e-142	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PHCCMDOK_00266	5.4e-112	ytsP	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
PHCCMDOK_00267	1.18e-111	-	-	-	L	ko:K07496	-	ko00000	Transposase
PHCCMDOK_00268	8.74e-146	yttP	-	-	K	-	-	-	Transcriptional regulator
PHCCMDOK_00269	1.78e-181	hisK	3.1.3.15	-	E	ko:K04486	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	COG1387 Histidinol phosphatase and related hydrolases of the PHP family
PHCCMDOK_00270	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PHCCMDOK_00271	1.07e-262	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Cysteine desulfurase
PHCCMDOK_00272	1.78e-283	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PHCCMDOK_00273	1.17e-38	-	-	-	S	ko:K06418,ko:K06419	-	ko00000	spore protein
PHCCMDOK_00274	2.68e-228	sppA	-	-	OU	ko:K04773	-	ko00000,ko01000,ko01002	signal peptide peptidase SppA
PHCCMDOK_00275	1.82e-126	yteJ	-	-	S	-	-	-	RDD family
PHCCMDOK_00276	1.49e-154	ytfI	-	-	S	-	-	-	Protein of unknown function (DUF2953)
PHCCMDOK_00277	1.19e-97	ytfJ	-	-	S	-	-	-	Sporulation protein YtfJ
PHCCMDOK_00278	1.77e-250	-	-	-	EGP	-	-	-	COG0477 Permeases of the major facilitator superfamily
PHCCMDOK_00279	3.92e-110	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PHCCMDOK_00280	1.33e-228	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	DNA methylase
PHCCMDOK_00281	2.04e-275	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PHCCMDOK_00282	1.03e-212	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	3'-5' exoribonuclease yhaM
PHCCMDOK_00284	1.18e-294	argG	6.3.4.5	-	E	ko:K01940	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the argininosuccinate synthase family. Type 1 subfamily
PHCCMDOK_00285	0.0	argH	4.3.2.1	-	E	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	argininosuccinate lyase
PHCCMDOK_00287	4.14e-177	ytkK	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PHCCMDOK_00288	4.51e-84	-	-	-	-	-	-	-	-
PHCCMDOK_00289	2.05e-255	ykvY	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	COG0006 Xaa-Pro aminopeptidase
PHCCMDOK_00290	3.84e-162	ytkL	-	-	S	-	-	-	Belongs to the UPF0173 family
PHCCMDOK_00292	2.37e-308	ytoI	-	-	K	-	-	-	transcriptional regulator containing CBS domains
PHCCMDOK_00293	3.35e-11	ytpI	-	-	S	-	-	-	YtpI-like protein
PHCCMDOK_00294	3.08e-213	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	COG0618 Exopolyphosphatase-related proteins
PHCCMDOK_00295	1.03e-117	ytrI	-	-	-	-	-	-	-
PHCCMDOK_00296	4.62e-70	ytrH	-	-	S	-	-	-	Sporulation protein YtrH
PHCCMDOK_00297	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
PHCCMDOK_00298	4.23e-287	ytsJ	1.1.1.38	-	C	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	ko00000,ko00001,ko01000	Malate dehydrogenase
PHCCMDOK_00299	2.38e-148	lutR_1	-	-	K	ko:K05799	-	ko00000,ko03000	helix_turn_helix gluconate operon transcriptional repressor
PHCCMDOK_00300	1.1e-196	accD	2.1.3.15, 6.4.1.2	-	I	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PHCCMDOK_00301	1.97e-228	accA	2.1.3.15, 6.4.1.2	-	I	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
PHCCMDOK_00302	3.27e-229	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PHCCMDOK_00303	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
PHCCMDOK_00304	4.09e-78	fxsA	-	-	S	ko:K07113	-	ko00000	COG3030 Protein affecting phage T7 exclusion by the F plasmid
PHCCMDOK_00305	4.98e-96	-	-	-	S	-	-	-	UPF0756 membrane protein
PHCCMDOK_00306	5.73e-263	citZ	2.3.3.1	-	C	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Belongs to the citrate synthase family
PHCCMDOK_00307	3.09e-306	icd	1.1.1.42	-	C	ko:K00031	ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146	br01601,ko00000,ko00001,ko00002,ko01000	isocitrate
PHCCMDOK_00308	9.96e-217	mdh	1.1.1.27, 1.1.1.37	-	C	ko:K00016,ko:K00024	ko00010,ko00020,ko00270,ko00620,ko00630,ko00640,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04922,map00010,map00020,map00270,map00620,map00630,map00640,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200,map04922	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible oxidation of malate to oxaloacetate
PHCCMDOK_00309	7.52e-85	-	-	-	K	ko:K03719	-	ko00000,ko03000,ko03036	helix_turn_helix ASNC type
PHCCMDOK_00310	2.8e-170	phoP	-	-	T	ko:K07658	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PHCCMDOK_00311	0.0	phoR	2.7.13.3	-	T	ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Signal transduction histidine kinase
PHCCMDOK_00312	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PHCCMDOK_00313	1.4e-197	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PHCCMDOK_00314	5.02e-134	ytaF	-	-	P	-	-	-	Probably functions as a manganese efflux pump
PHCCMDOK_00315	7.21e-129	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PHCCMDOK_00316	6.76e-246	gapB	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PHCCMDOK_00317	1.05e-88	speH	4.1.1.50	-	E	ko:K01611	ko00270,ko00330,ko01100,map00270,map00330,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
PHCCMDOK_00318	1.6e-85	-	-	-	-	-	-	-	-
PHCCMDOK_00319	4.36e-103	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PHCCMDOK_00320	0.0	dnaB	-	-	L	ko:K03346	-	ko00000,ko03032	Membrane attachment protein
PHCCMDOK_00321	1.66e-217	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
PHCCMDOK_00322	3.19e-284	mqnC	1.21.98.1	-	H	ko:K11784	ko00130,ko01110,map00130,map01110	ko00000,ko00001,ko01000	Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2)
PHCCMDOK_00323	2.74e-207	ytxC	-	-	S	-	-	-	YtxC-like family
PHCCMDOK_00324	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PHCCMDOK_00325	5.91e-234	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PHCCMDOK_00326	1.49e-224	-	-	-	C	-	-	-	Aldo/keto reductase family
PHCCMDOK_00327	0.0	dacC	3.4.16.4	-	M	ko:K07259	ko00550,map00550	ko00000,ko00001,ko01000,ko01002,ko01011	D-alanyl-D-alanine carboxypeptidase
PHCCMDOK_00328	2.55e-167	-	-	-	-	-	-	-	-
PHCCMDOK_00329	1.29e-296	yknX	-	-	M	ko:K02005,ko:K13888	-	ko00000,ko00002,ko02000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PHCCMDOK_00330	2.79e-153	yknY	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PHCCMDOK_00331	3.18e-264	yknZ	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	COG0577 ABC-type antimicrobial peptide transport system, permease component
PHCCMDOK_00332	2.34e-110	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PHCCMDOK_00333	3.08e-39	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
PHCCMDOK_00334	5.42e-75	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PHCCMDOK_00335	3.12e-68	ywcB	-	-	S	-	-	-	Protein of unknown function, DUF485
PHCCMDOK_00336	0.0	ywcA	-	-	S	ko:K14393	-	ko00000,ko02000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PHCCMDOK_00337	1.12e-85	ysdB	-	-	S	-	-	-	Sigma-w pathway protein YsdB
PHCCMDOK_00338	1.45e-257	ysdC	-	-	G	-	-	-	COG1363 Cellulase M and related proteins
PHCCMDOK_00339	1.02e-22	-	-	-	-	-	-	-	-
PHCCMDOK_00341	3.13e-42	sspI	-	-	S	ko:K06426	-	ko00000	Belongs to the SspI family
PHCCMDOK_00342	1.12e-163	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PHCCMDOK_00343	1.12e-244	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PHCCMDOK_00344	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PHCCMDOK_00345	4.31e-44	zapA	-	-	D	ko:K09888	-	ko00000,ko03036	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PHCCMDOK_00346	8.3e-117	yshB	-	-	S	-	-	-	membrane protein, required for colicin V production
PHCCMDOK_00347	0.0	polX	-	-	L	ko:K02347	-	ko00000,ko03400	COG1796 DNA polymerase IV (family X)
PHCCMDOK_00348	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PHCCMDOK_00349	4.19e-87	yshE	-	-	S	ko:K08989	-	ko00000	membrane
PHCCMDOK_00350	0.0	lcfA	6.2.1.3	-	IQ	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
PHCCMDOK_00351	3.47e-131	fadR	-	-	K	ko:K13770	-	ko00000,ko03000	Transcriptional regulator
PHCCMDOK_00352	1.17e-170	fadB	4.2.1.17	-	I	ko:K13767	ko00071,ko00362,ko01100,ko01120,ko01212,map00071,map00362,map01100,map01120,map01212	ko00000,ko00001,ko00002,ko01000	Belongs to the enoyl-CoA hydratase isomerase family
PHCCMDOK_00353	1.42e-171	etfB	-	-	C	ko:K03521	-	ko00000	Electron transfer flavoprotein
PHCCMDOK_00354	8.51e-219	etfA	-	-	C	ko:K03522	-	ko00000,ko04147	Electron transfer flavoprotein
PHCCMDOK_00355	1.37e-70	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
PHCCMDOK_00356	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PHCCMDOK_00357	7.17e-99	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
PHCCMDOK_00358	2.47e-293	ktrD	-	-	P	-	-	-	COG0168 Trk-type K transport systems, membrane components
PHCCMDOK_00359	5.12e-145	sdhC	-	-	C	ko:K00241	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002	succinate dehydrogenase
PHCCMDOK_00360	0.0	sdhA	1.3.5.1, 1.3.5.4	-	C	ko:K00239	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134	ko00000,ko00001,ko00002,ko01000	succinate dehydrogenase
PHCCMDOK_00361	2.82e-184	sdhB	1.3.5.1, 1.3.5.4	-	C	ko:K00240	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	succinate dehydrogenase
PHCCMDOK_00362	9.88e-100	ysmA	-	-	S	ko:K07107	-	ko00000,ko01000	thioesterase
PHCCMDOK_00363	2.77e-45	gerE	-	-	K	ko:K01994	-	ko00000,ko03000	Transcriptional regulator
PHCCMDOK_00364	2.33e-52	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPr
PHCCMDOK_00365	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PHCCMDOK_00366	3.85e-103	ysmB	-	-	K	-	-	-	transcriptional
PHCCMDOK_00367	5.03e-191	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
PHCCMDOK_00368	3.13e-42	-	-	-	C	-	-	-	4Fe-4S binding domain
PHCCMDOK_00369	3.62e-248	ybfQ	-	-	S	ko:K07146	-	ko00000	Belongs to the UPF0176 family
PHCCMDOK_00370	1.42e-236	gerM	-	-	S	ko:K06298	-	ko00000	COG5401 Spore germination protein
PHCCMDOK_00371	1.89e-173	rph	2.7.7.56	-	J	ko:K00989	-	ko00000,ko01000,ko03016	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
PHCCMDOK_00372	5.31e-136	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PHCCMDOK_00373	6.23e-123	ysnB	-	-	S	ko:K07095	-	ko00000	Phosphoesterase
PHCCMDOK_00376	1.53e-14	-	-	-	-	-	-	-	-
PHCCMDOK_00378	0.0	hsdR	3.1.21.3	-	L	ko:K01153	-	ko00000,ko01000,ko02048	COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases
PHCCMDOK_00379	1.91e-301	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	Type I restriction-modification system
PHCCMDOK_00380	1.89e-36	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
PHCCMDOK_00381	7.22e-55	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
PHCCMDOK_00382	0.0	cotA	1.16.3.3	-	Q	ko:K06324	-	ko00000,ko01000	multicopper oxidases
PHCCMDOK_00384	0.0	-	-	-	M	-	-	-	Glycosyl transferase family group 2
PHCCMDOK_00385	4.22e-90	-	-	-	-	-	-	-	-
PHCCMDOK_00386	0.0	ilvD	4.2.1.9	-	E	ko:K01687,ko:K16786	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,ko02010,map00290,map00770,map01100,map01110,map01130,map01210,map01230,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Belongs to the IlvD Edd family
PHCCMDOK_00387	0.0	ilvB	2.2.1.6	-	E	ko:K01652,ko:K16787	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,ko02010,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Acetolactate synthase
PHCCMDOK_00388	3.55e-110	ilvN	2.2.1.6	-	E	ko:K01653,ko:K16785	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,ko02010,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Acetolactate synthase
PHCCMDOK_00389	1.45e-234	ilvC	1.1.1.86	-	EH	ko:K00053	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PHCCMDOK_00390	0.0	leuA	2.3.3.13	-	E	ko:K01649	ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PHCCMDOK_00391	6.75e-247	leuB	1.1.1.85	-	CE	ko:K00052	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PHCCMDOK_00392	0.0	leuC	4.2.1.33, 4.2.1.35	-	E	ko:K01703	ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PHCCMDOK_00393	2.02e-144	leuD	4.2.1.33, 4.2.1.35	-	E	ko:K01704	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PHCCMDOK_00394	3.5e-227	ysoA	-	-	O	-	-	-	COG0457 FOG TPR repeat
PHCCMDOK_00395	8.96e-292	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PHCCMDOK_00396	2.85e-303	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PHCCMDOK_00397	0.0	lonB	3.4.21.53	-	LO	ko:K04076	-	ko00000,ko01000,ko01002	Belongs to the peptidase S16 family
PHCCMDOK_00398	0.0	lon	3.4.21.53	-	O	ko:K01338	ko04112,map04112	ko00000,ko00001,ko01000,ko01002	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
PHCCMDOK_00399	5.13e-138	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
PHCCMDOK_00400	3.42e-313	hemA	1.2.1.70	-	H	ko:K02492	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
PHCCMDOK_00401	5.2e-186	hemX	-	-	O	ko:K02497	-	ko00000	cytochrome C
PHCCMDOK_00402	8.46e-212	hemC	2.5.1.61	-	H	ko:K01749	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps
PHCCMDOK_00403	2.87e-169	hemD	4.2.1.75	-	H	ko:K01719	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Uroporphyrinogen-III synthase
PHCCMDOK_00404	3.02e-228	hemB	4.2.1.24	-	H	ko:K01698	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the ALAD family
PHCCMDOK_00405	3.38e-310	hemL	5.4.3.8	-	H	ko:K01845	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Glutamate-1-semialdehyde aminotransferase
PHCCMDOK_00406	6.23e-223	spoVID	-	-	M	ko:K06417	-	ko00000	stage VI sporulation protein D
PHCCMDOK_00407	1.9e-198	-	-	-	-	-	-	-	-
PHCCMDOK_00408	5.51e-239	ysxE	-	-	S	-	-	-	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
PHCCMDOK_00409	3.08e-139	-	-	-	-	-	-	-	-
PHCCMDOK_00410	1.27e-37	-	-	-	-	-	-	-	-
PHCCMDOK_00411	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PHCCMDOK_00412	1.18e-292	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
PHCCMDOK_00413	1.2e-150	comC	3.4.23.43	-	NOU	ko:K02236,ko:K02654	-	ko00000,ko00002,ko01000,ko01002,ko02035,ko02044	COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases
PHCCMDOK_00414	3.77e-248	-	-	-	-	ko:K06380	-	ko00000	-
PHCCMDOK_00415	0.0	yuxL	3.4.19.1	-	EU	ko:K01303	-	ko00000,ko01000,ko01002	peptidase
PHCCMDOK_00416	1.66e-131	maf	-	-	D	ko:K06287	-	ko00000	septum formation protein Maf
PHCCMDOK_00417	2.9e-156	radC	-	-	E	ko:K03630	-	ko00000	Belongs to the UPF0758 family
PHCCMDOK_00418	1.99e-238	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Rod shape-determining protein MreB
PHCCMDOK_00419	1.02e-203	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
PHCCMDOK_00420	1.48e-103	mreD	-	-	M	ko:K03571	-	ko00000,ko03036	shape-determining protein
PHCCMDOK_00421	3.82e-157	minC	-	-	D	ko:K03610	-	ko00000,ko03036,ko04812	Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
PHCCMDOK_00422	6.84e-183	minD	-	-	D	ko:K03609	-	ko00000,ko03036,ko04812	Belongs to the ParA family
PHCCMDOK_00423	6.33e-119	yfkM	3.5.1.124	-	S	ko:K05520	-	ko00000,ko01000,ko01002	protease
PHCCMDOK_00424	2.17e-97	-	4.6.1.17	-	H	ko:K03637	ko00790,ko01100,ko04122,map00790,map01100,map04122	ko00000,ko00001,ko01000	MoaC family
PHCCMDOK_00425	9.17e-118	-	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	BioY family
PHCCMDOK_00426	1.93e-214	yqkF	-	-	C	-	-	-	oxidoreductases (related to aryl-alcohol dehydrogenases)
PHCCMDOK_00427	6.87e-163	spoIVFA	-	-	M	ko:K06401	-	ko00000	COG0739 Membrane proteins related to metalloendopeptidases
PHCCMDOK_00428	3.38e-172	spoIVFB	-	-	S	ko:K06402	-	ko00000,ko01000,ko01002	Stage IV sporulation protein
PHCCMDOK_00429	0.0	cafA	-	-	J	ko:K08301	-	ko00000,ko01000,ko03009,ko03019	ribonuclease, Rne Rng family
PHCCMDOK_00430	5.22e-65	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
PHCCMDOK_00431	5.37e-74	ysxB	-	-	J	ko:K07584	-	ko00000	ribosomal protein
PHCCMDOK_00432	1.58e-59	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
PHCCMDOK_00433	2.47e-58	abrB	-	-	K	ko:K06284	-	ko00000,ko03000	SpoVT / AbrB like domain
PHCCMDOK_00434	1.88e-273	-	-	-	Q	-	-	-	COG1228 Imidazolonepropionase and related amidohydrolases
PHCCMDOK_00436	4.16e-150	ung2	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil DNA glycosylase superfamily
PHCCMDOK_00437	1.41e-264	-	1.4.5.1	-	E	ko:K00285	ko00360,map00360	ko00000,ko00001,ko01000	COG0665 Glycine D-amino acid oxidases (deaminating)
PHCCMDOK_00438	2.21e-166	-	-	-	S	ko:K07010	-	ko00000,ko01002	Peptidase C26
PHCCMDOK_00439	0.0	nylA	3.5.1.4	-	J	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	ko00000,ko00001,ko01000	Belongs to the amidase family
PHCCMDOK_00440	5.83e-100	-	-	-	S	-	-	-	DinB family
PHCCMDOK_00441	2.34e-211	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
PHCCMDOK_00442	4.11e-203	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
PHCCMDOK_00443	2.52e-205	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease
PHCCMDOK_00444	1.23e-188	pstBA	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PHCCMDOK_00445	1.5e-184	pstB	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PHCCMDOK_00446	1.67e-141	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
PHCCMDOK_00447	7.61e-81	-	-	-	-	-	-	-	-
PHCCMDOK_00448	0.0	addB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	exonuclease activity
PHCCMDOK_00449	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
PHCCMDOK_00450	0.0	cheA	2.7.13.3	-	NT	ko:K03407	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035	COG0643 Chemotaxis protein histidine kinase and related kinases
PHCCMDOK_00451	7.36e-89	cheW	-	-	NT	ko:K03408,ko:K03415	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko02022,ko02035	chemotaxis
PHCCMDOK_00452	0.0	asnH	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
PHCCMDOK_00453	1.31e-63	-	-	-	S	-	-	-	IDEAL
PHCCMDOK_00454	9.07e-196	ykgA	-	-	E	-	-	-	Amidinotransferase
PHCCMDOK_00455	0.0	yqjD	2.1.3.15, 6.4.1.3	-	I	ko:K01966	ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
PHCCMDOK_00456	5.62e-116	-	-	-	-	-	-	-	-
PHCCMDOK_00457	5.57e-83	ytwF	-	-	P	-	-	-	Sulfurtransferase
PHCCMDOK_00458	9.73e-55	-	-	-	-	-	-	-	-
PHCCMDOK_00459	4.15e-187	yitV	-	-	S	ko:K06889	-	ko00000	COG1073 Hydrolases of the alpha beta superfamily
PHCCMDOK_00460	8.93e-187	yitT	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2179)
PHCCMDOK_00461	7.05e-17	-	-	-	S	-	-	-	Intracellular proteinase inhibitor
PHCCMDOK_00463	0.0	ywqA	-	-	L	-	-	-	COG0553 Superfamily II DNA RNA helicases, SNF2 family
PHCCMDOK_00464	4.35e-282	ywqB	-	-	S	-	-	-	zinc ion binding
PHCCMDOK_00465	4.2e-139	-	-	-	-	-	-	-	-
PHCCMDOK_00466	2.72e-102	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PHCCMDOK_00467	1.24e-192	yitU	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolases of the HAD superfamily
PHCCMDOK_00468	5.56e-213	ctaG	-	-	S	ko:K02862	-	ko00000	cytochrome c oxidase
PHCCMDOK_00469	3.5e-248	argC	1.2.1.38	-	E	ko:K00145	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PHCCMDOK_00470	1.41e-284	argJ	2.3.1.1, 2.3.1.35	-	E	ko:K00620	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PHCCMDOK_00471	7.81e-165	argB	2.7.2.8	-	E	ko:K00930	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the acetylglutamate kinase family. ArgB subfamily
PHCCMDOK_00472	6.54e-271	argD	2.6.1.11, 2.6.1.17	-	E	ko:K00821	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	acetylornithine aminotransferase
PHCCMDOK_00473	2.17e-266	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
PHCCMDOK_00474	0.0	carB	6.3.5.5	-	EF	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase ammonia chain
PHCCMDOK_00475	3.48e-217	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PHCCMDOK_00476	7.03e-150	yjaU	-	-	I	-	-	-	carboxylic ester hydrolase activity
PHCCMDOK_00477	2.18e-184	-	5.1.3.2	-	GM	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	RmlD substrate binding domain
PHCCMDOK_00478	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PHCCMDOK_00479	5.14e-19	comZ	-	-	S	ko:K02254	-	ko00000,ko02044	Competence protein ComG
PHCCMDOK_00481	8.46e-212	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PHCCMDOK_00482	7.41e-294	fabF	2.3.1.179	-	I	ko:K09458,ko:K14660	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PHCCMDOK_00483	0.0	-	2.7.7.19, 2.7.7.72	-	J	ko:K00970,ko:K00974	ko03013,ko03018,map03013,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	Poly A polymerase head domain
PHCCMDOK_00485	1.58e-132	-	3.5.1.28	-	M	ko:K01449	-	ko00000,ko01000	Cell Wall Hydrolase
PHCCMDOK_00486	1.6e-171	ykwD	-	-	J	-	-	-	protein with SCP PR1 domains
PHCCMDOK_00487	2.13e-228	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
PHCCMDOK_00488	2.04e-174	ywaC	2.7.6.5	-	S	ko:K00951,ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	protein conserved in bacteria
PHCCMDOK_00489	1.92e-197	yjaZ	-	-	O	-	-	-	Zn-dependent protease
PHCCMDOK_00490	3.16e-180	yjbA	-	-	S	-	-	-	Belongs to the UPF0736 family
PHCCMDOK_00491	1.94e-15	-	-	-	-	-	-	-	-
PHCCMDOK_00492	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
PHCCMDOK_00493	1.96e-311	ynbB	-	-	P	-	-	-	COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance
PHCCMDOK_00494	5.8e-220	spoVK	-	-	O	ko:K06413	-	ko00000	stage V sporulation protein K
PHCCMDOK_00495	5.87e-231	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PHCCMDOK_00496	1.24e-47	hfq	-	-	J	ko:K03666	ko02024,ko03018,ko05111,map02024,map03018,map05111	ko00000,ko00001,ko03019,ko03036	RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs
PHCCMDOK_00497	7e-215	miaA	2.5.1.75	-	J	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PHCCMDOK_00498	1.42e-171	-	-	-	J	-	-	-	Putative SAM-dependent methyltransferase
PHCCMDOK_00499	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PHCCMDOK_00500	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PHCCMDOK_00501	1.13e-133	cotE	-	-	S	ko:K06328	-	ko00000	Spore coat protein
PHCCMDOK_00502	3.04e-86	ymcA	3.6.3.21	-	S	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	Belongs to the UPF0342 family
PHCCMDOK_00503	0.0	miaB	2.8.4.3	-	J	ko:K06168	-	ko00000,ko01000,ko03016	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PHCCMDOK_00504	1.03e-195	tgl	2.3.2.13	-	H	ko:K00686	-	ko00000,ko01000	Probably plays a role in the assembly of the spore coat proteins by catalyzing epsilon-(gamma-glutamyl)lysine cross-links
PHCCMDOK_00505	7.82e-51	spoVS	-	-	S	ko:K06416	-	ko00000	Stage V sporulation protein S
PHCCMDOK_00506	1.76e-190	ymdB	-	-	S	ko:K02029,ko:K02030,ko:K09769	-	ko00000,ko00002,ko02000	protein conserved in bacteria
PHCCMDOK_00507	3.81e-293	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
PHCCMDOK_00508	7.39e-147	-	-	-	L	-	-	-	DNA recombination
PHCCMDOK_00509	8.1e-10	-	-	-	-	-	-	-	-
PHCCMDOK_00510	0.0	-	-	-	L	-	-	-	AAA domain
PHCCMDOK_00511	3.32e-239	-	-	-	L	-	-	-	Calcineurin-like phosphoesterase superfamily domain
PHCCMDOK_00512	3.46e-242	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PHCCMDOK_00513	0.0	deaD	3.6.4.13	-	JKL	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PHCCMDOK_00514	4.04e-284	cinA	3.5.1.42	-	S	ko:K03742,ko:K03743	ko00760,map00760	ko00000,ko00001,ko01000	Belongs to the CinA family
PHCCMDOK_00515	2.85e-128	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PHCCMDOK_00516	4.82e-180	ymfM	-	-	S	ko:K15539	-	ko00000	protein conserved in bacteria
PHCCMDOK_00517	5.43e-180	ymfK	-	-	S	-	-	-	Protein of unknown function (DUF3388)
PHCCMDOK_00518	1.34e-51	ymfJ	-	-	S	-	-	-	Protein of unknown function (DUF3243)
PHCCMDOK_00519	2.17e-152	ymfI	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PHCCMDOK_00520	4.11e-311	ymfH	-	-	S	-	-	-	zinc protease
PHCCMDOK_00521	4.96e-289	albE	-	-	S	-	-	-	Peptidase M16
PHCCMDOK_00522	1.18e-165	ymfC	-	-	K	ko:K03710	-	ko00000,ko03000	Transcriptional regulator
PHCCMDOK_00523	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
PHCCMDOK_00524	1.37e-06	-	-	-	S	-	-	-	YlzJ-like protein
PHCCMDOK_00525	3.79e-165	tepA	-	-	OU	-	-	-	COG0740 Protease subunit of ATP-dependent Clp proteases
PHCCMDOK_00526	0.0	rnjB	-	-	S	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PHCCMDOK_00527	2.91e-200	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PHCCMDOK_00528	2.52e-281	dapG	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
PHCCMDOK_00529	1.03e-243	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PHCCMDOK_00530	7.62e-138	spoVFB	-	-	H	ko:K06411	-	ko00000	Together with DpaA, catalyzes the conversion of dihydrodipicolinate to dipicolinate (DPA)
PHCCMDOK_00531	9.09e-203	spoVFA	-	-	E	ko:K06410	-	ko00000	subunit a
PHCCMDOK_00532	1.52e-48	ymxH	-	-	S	-	-	-	YlmC YmxH family
PHCCMDOK_00533	4.85e-279	mlpA	-	-	S	-	-	-	Belongs to the peptidase M16 family
PHCCMDOK_00534	1.78e-240	ylxY	-	-	G	-	-	-	Sporulation protein, polysaccharide deacetylase
PHCCMDOK_00535	0.0	pnp	2.7.7.8	-	J	ko:K00962	ko00230,ko00240,ko03018,map00230,map00240,map03018	ko00000,ko00001,ko00002,ko01000,ko03016,ko03019	Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
PHCCMDOK_00536	7.11e-57	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PHCCMDOK_00537	1.95e-222	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
PHCCMDOK_00538	2.37e-218	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PHCCMDOK_00539	2.49e-75	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PHCCMDOK_00540	2.96e-55	ylxP	-	-	S	ko:K09764	-	ko00000	protein conserved in bacteria
PHCCMDOK_00541	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PHCCMDOK_00542	4.13e-62	ylxQ	-	-	J	-	-	-	ribosomal protein
PHCCMDOK_00543	1.94e-55	ylxR	-	-	K	ko:K07742	-	ko00000	nucleic-acid-binding protein implicated in transcription termination
PHCCMDOK_00544	9.27e-251	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
PHCCMDOK_00545	1.1e-103	rimP	-	-	S	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
PHCCMDOK_00546	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PHCCMDOK_00547	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PHCCMDOK_00548	1.81e-292	rasP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
PHCCMDOK_00549	9.16e-264	dxr	1.1.1.267	-	I	ko:K00099	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
PHCCMDOK_00550	3.35e-175	cdsA	2.7.7.41	-	S	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
PHCCMDOK_00551	1.76e-186	uppS	2.5.1.31	-	I	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PHCCMDOK_00552	3.08e-115	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PHCCMDOK_00553	3.37e-160	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
PHCCMDOK_00554	8.35e-199	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PHCCMDOK_00555	2.3e-170	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
PHCCMDOK_00556	1.99e-05	ylxL	-	-	-	-	-	-	-
PHCCMDOK_00557	7.05e-171	sigD	-	-	K	ko:K02405	ko02020,ko02025,ko02026,ko02040,ko05111,map02020,map02025,map02026,map02040,map05111	ko00000,ko00001,ko02035,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PHCCMDOK_00558	4.45e-109	cheD	3.5.1.44	-	NT	ko:K03411	ko02030,map02030	ko00000,ko00001,ko01000,ko02035	Deamidates glutamine residues to glutamate on methyl- accepting chemotaxis receptors (MCPs). CheD-mediated MCP deamidation is required for productive communication of the conformational signals of the chemoreceptors to the CheA kinase
PHCCMDOK_00559	2.06e-136	cheC	-	-	NT	ko:K03410	ko02030,map02030	ko00000,ko00001,ko02035	COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation
PHCCMDOK_00560	4.48e-206	cheB	3.1.1.61, 3.5.1.44	-	NT	ko:K03412	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR
PHCCMDOK_00561	2.84e-123	-	-	-	-	-	-	-	-
PHCCMDOK_00562	5.58e-222	flhF	-	-	N	ko:K02404	-	ko00000,ko02035	Flagellar biosynthesis regulator FlhF
PHCCMDOK_00563	0.0	flhA	-	-	N	ko:K02400	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
PHCCMDOK_00564	1.39e-238	flhB	-	-	N	ko:K02401	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
PHCCMDOK_00565	2.52e-167	fliR	-	-	N	ko:K02421	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Flagellar biosynthetic protein FliR
PHCCMDOK_00566	8.01e-54	fliQ	-	-	N	ko:K02420	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Role in flagellar biosynthesis
PHCCMDOK_00567	1.47e-145	fliP	-	-	N	ko:K02419	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Plays a role in the flagellum-specific transport system
PHCCMDOK_00568	1.78e-132	fliZ	-	-	N	ko:K02418	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Flagellar biosynthesis protein, FliO
PHCCMDOK_00569	1.05e-77	cheY	-	-	T	ko:K03413	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko02022,ko02035	cheY-homologous receiver domain
PHCCMDOK_00570	4.7e-263	fliY	-	-	N	ko:K02417	ko02030,ko02040,map02030,map02040	ko00000,ko00001,ko02035,ko02044	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
PHCCMDOK_00571	7.63e-224	fliM	-	-	N	ko:K02416	ko02030,ko02040,map02030,map02040	ko00000,ko00001,ko02035	One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation
PHCCMDOK_00572	9.32e-92	fliL	-	-	N	ko:K02415	-	ko00000,ko02035	Controls the rotational direction of flagella during chemotaxis
PHCCMDOK_00573	1.26e-37	flbD	-	-	N	ko:K02385	-	ko00000,ko02035	protein, possibly involved in motility
PHCCMDOK_00574	1.37e-179	flgG	-	-	N	ko:K02390	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar basal body rod
PHCCMDOK_00575	1.05e-93	flgD	-	-	N	ko:K02389	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar basal body rod modification protein
PHCCMDOK_00576	3.08e-263	-	-	-	N	ko:K02414	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar hook-length control protein FliK
PHCCMDOK_00578	1.79e-91	fliJ	-	-	N	ko:K02413	ko02040,map02040	ko00000,ko00001,ko02035	bacterial-type flagellum organization
PHCCMDOK_00579	1.14e-310	fliI	3.6.3.14	-	NU	ko:K02412	ko02040,map02040	ko00000,ko00001,ko01000,ko02035,ko02044	COG1157 Flagellar biosynthesis type III secretory pathway ATPase
PHCCMDOK_00580	1.93e-102	fliH	-	-	NU	ko:K02411	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	COG1317 Flagellar biosynthesis type III secretory pathway protein
PHCCMDOK_00581	1.32e-227	fliG	-	-	N	ko:K02410	ko02030,ko02040,map02030,map02040	ko00000,ko00001,ko02035	One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation
PHCCMDOK_00582	0.0	fliF	-	-	N	ko:K02409	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	The M ring may be actively involved in energy transduction
PHCCMDOK_00583	2.85e-51	fliE	-	-	N	ko:K02408	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar hook-basal body
PHCCMDOK_00584	5.12e-96	flgC	-	-	N	ko:K02388	ko02040,map02040	ko00000,ko00001,ko02035	Belongs to the flagella basal body rod proteins family
PHCCMDOK_00585	2.38e-86	flgB	-	-	N	ko:K02387	ko02040,map02040	ko00000,ko00001,ko02035	Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body
PHCCMDOK_00586	2.27e-174	codY	-	-	K	ko:K03706	-	ko00000,ko03000	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
PHCCMDOK_00587	1.13e-295	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PHCCMDOK_00588	2.12e-120	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PHCCMDOK_00589	1.53e-213	xerC	-	-	L	ko:K03733,ko:K04763	-	ko00000,ko03036	tyrosine recombinase XerC
PHCCMDOK_00590	0.0	trmFO	2.1.1.74	-	J	ko:K04094	-	ko00000,ko01000,ko03016,ko03036	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PHCCMDOK_00591	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PHCCMDOK_00592	2.49e-215	dprA	-	-	LU	ko:K04096	-	ko00000	Rossmann fold nucleotide-binding protein involved in DNA uptake
PHCCMDOK_00593	3.09e-215	sucD	6.2.1.5	-	C	ko:K01902	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
PHCCMDOK_00594	1.27e-269	sucC	6.2.1.5	-	C	ko:K01903	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
PHCCMDOK_00595	1.65e-96	ylqH	-	-	S	ko:K04061	-	ko00000,ko02044	FlhB HrpN YscU SpaS Family
PHCCMDOK_00597	8.9e-174	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PHCCMDOK_00599	3.3e-200	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PHCCMDOK_00600	9.73e-132	sipS	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PHCCMDOK_00601	5.43e-11	-	-	-	-	-	-	-	-
PHCCMDOK_00602	0.0	fruA	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type)
PHCCMDOK_00603	1.84e-208	pfkB	2.7.1.56	-	G	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family
PHCCMDOK_00604	4.76e-169	fruR	-	-	K	ko:K03436	-	ko00000,ko03000	Transcriptional regulator
PHCCMDOK_00605	0.0	yfmR	-	-	S	ko:K15738	-	ko00000,ko02000	COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PHCCMDOK_00606	5.93e-261	nos	1.14.14.47	-	C	ko:K00491	ko00220,ko00330,ko01100,ko01110,map00220,map00330,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
PHCCMDOK_00607	3.12e-110	bsaA	1.11.1.9	-	O	ko:K00432	ko00480,ko00590,ko04918,map00480,map00590,map04918	ko00000,ko00001,ko01000	Belongs to the glutathione peroxidase family
PHCCMDOK_00608	4.76e-156	treR	-	-	K	ko:K03486	-	ko00000,ko03000	transcriptional
PHCCMDOK_00609	0.0	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	COG0366 Glycosidases
PHCCMDOK_00610	0.0	treP	2.7.1.201	-	G	ko:K02818,ko:K02819	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHCCMDOK_00611	0.0	ggt	2.3.2.2, 3.4.19.13	-	E	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	ko00000,ko00001,ko01000,ko01002	gamma-glutamyltransferase
PHCCMDOK_00612	0.0	yngK	-	-	T	-	-	-	Glycosyl hydrolase-like 10
PHCCMDOK_00613	5.24e-296	ykvU	-	-	S	-	-	-	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PHCCMDOK_00614	2.18e-304	alsT	-	-	E	ko:K03310	-	ko00000	Sodium alanine symporter
PHCCMDOK_00615	2.39e-121	glpP	-	-	K	ko:K02443	-	ko00000,ko03000	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
PHCCMDOK_00616	0.0	glpD	1.1.5.3	-	C	ko:K00111	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
PHCCMDOK_00617	0.0	glpK	2.7.1.30	-	C	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PHCCMDOK_00618	9.69e-291	kinB3	2.7.13.3	-	T	ko:K07697	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHCCMDOK_00619	0.0	yfiC3	-	-	V	ko:K06147	-	ko00000,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
PHCCMDOK_00620	0.0	yfiB3	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
PHCCMDOK_00621	0.0	uvrD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
PHCCMDOK_00622	1.21e-216	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphonate ABC transporter
PHCCMDOK_00623	2.56e-179	phnC	3.6.3.28	-	P	ko:K02041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PHCCMDOK_00624	3.49e-175	phnE	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PHCCMDOK_00625	5.2e-184	ptxC	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PHCCMDOK_00626	7.66e-181	-	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PHCCMDOK_00627	4.43e-307	-	-	-	V	-	-	-	MatE
PHCCMDOK_00628	2.01e-139	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PHCCMDOK_00629	1.24e-53	gpm5	3.1.3.3, 5.4.2.11	-	G	ko:K01834,ko:K22305	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	alpha-ribazole phosphatase activity
PHCCMDOK_00630	1.08e-207	pepI	3.4.11.5	-	I	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Alpha/beta hydrolase family
PHCCMDOK_00631	4.88e-207	dppC	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PHCCMDOK_00632	2.31e-232	dppB	-	-	EP	ko:K02033	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PHCCMDOK_00633	0.0	hbpA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0747 ABC-type dipeptide transport system, periplasmic component
PHCCMDOK_00634	3.56e-235	appF	-	-	E	ko:K02032,ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHCCMDOK_00635	5.46e-233	dppD	-	-	P	ko:K02031,ko:K16202	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHCCMDOK_00636	0.0	XK27_11280	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PHCCMDOK_00637	5.41e-73	-	-	-	S	-	-	-	Domain of unknown function (DUF4440)
PHCCMDOK_00638	7.2e-130	ynaD	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PHCCMDOK_00639	1.74e-291	-	-	-	S	ko:K07112	-	ko00000	Sulphur transport
PHCCMDOK_00640	6.05e-225	-	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	transport system, periplasmic component
PHCCMDOK_00641	8.1e-218	-	-	-	S	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PHCCMDOK_00642	5.58e-178	-	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	transport system, ATPase component
PHCCMDOK_00643	2.52e-236	-	-	-	-	-	-	-	-
PHCCMDOK_00644	7.38e-252	cysA	3.6.3.25	-	P	ko:K02045	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
PHCCMDOK_00645	1.6e-175	cysW	-	-	P	ko:K02047	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	COG4208 ABC-type sulfate transport system, permease component
PHCCMDOK_00646	4.85e-172	cysT	-	-	O	ko:K02046	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	COG0555 ABC-type sulfate transport system, permease component
PHCCMDOK_00647	1.09e-249	sbp	-	-	P	ko:K02048	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	COG1613 ABC-type sulfate transport system, periplasmic component
PHCCMDOK_00648	2.68e-105	ebsC	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PHCCMDOK_00649	0.0	-	-	-	T	-	-	-	COG0642 Signal transduction histidine kinase
PHCCMDOK_00650	0.0	dld	1.1.2.4, 1.1.3.15	-	C	ko:K00102,ko:K00104	ko00620,ko00630,ko01100,ko01110,ko01120,ko01130,map00620,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	Glycolate oxidase subunit
PHCCMDOK_00651	4.87e-198	yocS	-	-	S	ko:K03453	-	ko00000	-transporter
PHCCMDOK_00652	9.92e-302	aroA	2.5.1.19	-	E	ko:K00800	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PHCCMDOK_00653	1.34e-199	-	-	-	K	-	-	-	LysR substrate binding domain
PHCCMDOK_00654	0.0	-	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0747 ABC-type dipeptide transport system, periplasmic component
PHCCMDOK_00655	2.51e-261	ytpB	4.2.3.130	-	S	ko:K16188	-	ko00000,ko01000	Tetraprenyl-beta-curcumene synthase
PHCCMDOK_00656	7.25e-83	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PHCCMDOK_00657	9.8e-124	-	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
PHCCMDOK_00658	6.43e-192	malG	-	-	G	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_00659	8.01e-215	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_00660	0.0	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PHCCMDOK_00661	0.0	-	-	-	S	ko:K09955	-	ko00000	Beta-L-arabinofuranosidase, GH127
PHCCMDOK_00662	2.03e-217	yisR1	3.2.1.23	-	K	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	AraC-like ligand binding domain
PHCCMDOK_00663	3.36e-154	spaF	-	-	V	ko:K01990,ko:K20490	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PHCCMDOK_00664	5.28e-160	spaE	-	-	S	ko:K20491	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko00002,ko02000	ABC-2 family transporter protein
PHCCMDOK_00665	2.09e-167	spaG	-	-	S	ko:K20492	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko00002,ko02000	ABC-2 family transporter protein
PHCCMDOK_00666	2.14e-155	spaR	-	-	K	ko:K20488	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C terminal
PHCCMDOK_00667	0.0	spaK	2.7.13.3	-	T	ko:K20487	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	His Kinase A (phosphoacceptor) domain
PHCCMDOK_00668	3.16e-93	-	-	-	S	-	-	-	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
PHCCMDOK_00669	4.28e-97	lrpC	-	-	K	ko:K03719	-	ko00000,ko03000,ko03036	helix_turn_helix ASNC type
PHCCMDOK_00670	6.8e-135	argO	-	-	S	ko:K06895	-	ko00000,ko02000	Lysine exporter protein LysE YggA
PHCCMDOK_00671	0.0	-	-	-	K	ko:K18907	-	ko00000,ko00002,ko01504,ko03000	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PHCCMDOK_00672	5.73e-120	ykkA	-	-	S	-	-	-	Protein of unknown function (DUF664)
PHCCMDOK_00673	1.19e-97	yuxK	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_00674	2.75e-105	-	-	-	S	-	-	-	Protein of unknown function (DUF1569)
PHCCMDOK_00675	1.06e-54	-	-	-	S	-	-	-	Protein of unknown function, DUF600
PHCCMDOK_00676	2.84e-20	-	-	-	S	-	-	-	Protein of unknown function, DUF600
PHCCMDOK_00677	5.61e-107	-	-	-	S	-	-	-	SMI1-KNR4 cell-wall
PHCCMDOK_00678	4.34e-316	-	-	-	S	-	-	-	LXG domain of WXG superfamily
PHCCMDOK_00679	6.97e-45	-	-	-	S	-	-	-	Family of unknown function (DUF5344)
PHCCMDOK_00680	2.03e-27	-	-	-	S	-	-	-	Domain of unknown function (DUF5082)
PHCCMDOK_00681	1.4e-186	yjqC	-	-	P	ko:K07217	-	ko00000	Catalase
PHCCMDOK_00682	5.44e-139	ycgF	-	-	E	-	-	-	Lysine exporter protein LysE YggA
PHCCMDOK_00683	3.37e-307	ycgH	-	-	E	ko:K03293	-	ko00000	COG1113 Gamma-aminobutyrate permease and related permeases
PHCCMDOK_00684	9.09e-149	yhcQ	-	-	M	-	-	-	Spore coat protein
PHCCMDOK_00685	9.81e-06	-	-	-	S	-	-	-	Sporulation inhibitor A
PHCCMDOK_00686	1.16e-212	-	4.3.1.12	-	E	ko:K01750	ko00330,ko01110,ko01130,ko01230,map00330,map01110,map01130,map01230	ko00000,ko00001,ko01000	Ornithine cyclodeaminase/mu-crystallin family
PHCCMDOK_00687	5.78e-220	eutB	4.3.1.19	-	E	ko:K01754	ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Pyridoxal-phosphate dependent enzyme
PHCCMDOK_00688	4.15e-265	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
PHCCMDOK_00689	7.77e-151	-	-	-	S	-	-	-	HTH domain
PHCCMDOK_00690	3.31e-239	speB	3.5.3.11	-	E	ko:K01480	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko00002,ko01000	Arginase family
PHCCMDOK_00691	5.03e-165	yrkP	-	-	T	ko:K02483	-	ko00000,ko02022	Transcriptional regulator
PHCCMDOK_00692	5.48e-258	-	-	-	T	-	-	-	Histidine kinase
PHCCMDOK_00693	1.9e-204	-	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	D-alanyl-D-alanine carboxypeptidase
PHCCMDOK_00694	2.79e-155	ydfF	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
PHCCMDOK_00695	3.71e-140	ydfE	-	-	S	-	-	-	Flavin reductase like domain
PHCCMDOK_00696	5.87e-182	-	1.1.1.140	-	C	ko:K00068	ko00051,map00051	ko00000,ko00001,ko01000	Enoyl-(Acyl carrier protein) reductase
PHCCMDOK_00697	2.8e-72	srlB	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
PHCCMDOK_00698	1.68e-229	srlE	2.7.1.198	-	G	ko:K02782,ko:K02783	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol sorbitol-specific transporter subunit IIB
PHCCMDOK_00699	2.18e-126	srlA	-	-	G	ko:K02783	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko02000	PTS system enzyme II sorbitol-specific factor
PHCCMDOK_00700	2.85e-98	srlR	-	-	K	-	-	-	Glucitol operon activator
PHCCMDOK_00701	3.14e-220	-	-	-	K	-	-	-	COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain
PHCCMDOK_00702	4.19e-12	yngG	4.1.3.4	-	E	ko:K01640	ko00072,ko00280,ko00281,ko00650,ko01100,ko04146,map00072,map00280,map00281,map00650,map01100,map04146	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA lyase
PHCCMDOK_00703	1.11e-41	ydfH_4	-	-	K	-	-	-	GntR family
PHCCMDOK_00704	1.1e-148	-	1.1.1.215, 1.1.1.26, 1.1.1.79, 1.1.1.81	-	CH	ko:K00015,ko:K00090	ko00030,ko00260,ko00620,ko00630,ko01100,ko01110,ko01120,map00030,map00260,map00620,map00630,map01100,map01110,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PHCCMDOK_00705	5.22e-50	-	-	-	E	-	-	-	COG0346 Lactoylglutathione lyase and related lyases
PHCCMDOK_00706	9.35e-118	-	-	-	L	ko:K07482	-	ko00000	Integrase
PHCCMDOK_00707	2.68e-34	-	-	-	L	-	-	-	Transposase
PHCCMDOK_00708	2.57e-239	-	-	-	P	ko:K03449	-	ko00000,ko02000	COG2807 Cyanate permease
PHCCMDOK_00709	7.12e-229	-	-	-	S	-	-	-	amine dehydrogenase activity
PHCCMDOK_00710	9.73e-155	-	-	-	T	ko:K02483	-	ko00000,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PHCCMDOK_00711	0.0	-	-	-	T	-	-	-	Histidine kinase
PHCCMDOK_00712	3.8e-86	-	-	-	S	-	-	-	YtkA-like
PHCCMDOK_00713	7.45e-74	eaeH	-	-	M	ko:K13735	ko05100,map05100	ko00000,ko00001	LysM domain
PHCCMDOK_00714	1.38e-35	phhB	3.5.4.33, 4.2.1.96	-	H	ko:K01724,ko:K11991	ko00790,map00790	ko00000,ko00001,ko01000,ko03016,ko04147	pterin-4-alpha-carbinolamine dehydratase
PHCCMDOK_00715	9.16e-301	-	-	-	S	ko:K03308	-	ko00000	Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
PHCCMDOK_00717	7.66e-178	ubiE	-	-	Q	-	-	-	Methyltransferase type 11
PHCCMDOK_00718	1.79e-87	mmyG	-	-	S	-	-	-	dehydrogenases and related proteins
PHCCMDOK_00720	8.09e-44	-	-	-	-	-	-	-	-
PHCCMDOK_00721	5.33e-67	-	-	-	S	-	-	-	Bacterial PH domain
PHCCMDOK_00722	2.18e-40	-	-	-	-	-	-	-	-
PHCCMDOK_00724	7.15e-137	M1-1017	-	-	S	-	-	-	Protein of unknown function (DUF1129)
PHCCMDOK_00725	3.5e-70	-	-	-	K	ko:K10947	-	ko00000,ko03000	Transcriptional regulator
PHCCMDOK_00726	3.74e-134	-	-	-	S	-	-	-	DUF218 domain
PHCCMDOK_00727	1.61e-190	degV	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_00728	0.0	mutS1	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PHCCMDOK_00729	1.33e-52	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PHCCMDOK_00730	1.12e-288	yciC	-	-	S	-	-	-	GTPases (G3E family)
PHCCMDOK_00731	3.67e-164	deoD	2.4.2.1	-	F	ko:K03784	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Purine nucleoside phosphorylase
PHCCMDOK_00732	7.83e-240	mhqA	-	-	E	ko:K15975	-	ko00000	COG0346 Lactoylglutathione lyase and related lyases
PHCCMDOK_00733	0.0	-	4.1.1.61, 4.1.1.98	-	H	ko:K01612,ko:K03182	ko00130,ko00627,ko01100,ko01110,ko01120,ko01220,map00130,map00627,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the UbiD family
PHCCMDOK_00734	1.51e-147	scoB	2.8.3.5	-	I	ko:K01029	ko00072,ko00280,ko00650,map00072,map00280,map00650	ko00000,ko00001,ko01000	COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit
PHCCMDOK_00735	1.29e-169	scoA	2.8.3.5	-	I	ko:K01028	ko00072,ko00280,ko00650,map00072,map00280,map00650	ko00000,ko00001,ko01000	COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
PHCCMDOK_00736	2.44e-303	atoE	-	-	I	ko:K02106	ko02020,map02020	ko00000,ko00001	Short chain fatty acid transporter
PHCCMDOK_00737	1.84e-239	malR	-	-	K	-	-	-	Transcriptional regulator
PHCCMDOK_00738	3.96e-190	malG	-	-	P	ko:K15772	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	transport
PHCCMDOK_00739	3.68e-314	-	-	-	P	ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1175 ABC-type sugar transport systems, permease components
PHCCMDOK_00740	4.36e-301	malE	-	-	G	ko:K02027,ko:K15770,ko:K17237	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG2182 Maltose-binding periplasmic proteins domains
PHCCMDOK_00741	0.0	nplT	3.2.1.133, 3.2.1.135, 3.2.1.54	GH13	G	ko:K01208	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, N-terminal ig-like domain
PHCCMDOK_00743	2.56e-309	codA	3.5.4.1	-	F	ko:K01485	ko00240,ko00330,ko01100,map00240,map00330,map01100	ko00000,ko00001,ko01000	Amidohydrolase family
PHCCMDOK_00744	5.42e-279	codB	-	-	F	ko:K10974	-	ko00000,ko02000	cytosine purines uracil thiamine allantoin
PHCCMDOK_00746	0.0	-	-	-	QT	ko:K09684	-	ko00000,ko03000	COG2508 Regulator of polyketide synthase expression
PHCCMDOK_00747	5.76e-287	lhgO	1.1.5.3	-	S	ko:K00111,ko:K15736	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	FAD dependent oxidoreductase
PHCCMDOK_00748	0.0	-	-	-	C	ko:K11473	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001	Glycolate oxidase
PHCCMDOK_00749	0.0	-	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	Glycolate oxidase subunit
PHCCMDOK_00750	4.75e-158	-	-	-	K	-	-	-	COG2186 Transcriptional regulators
PHCCMDOK_00751	2.62e-150	-	-	-	K	ko:K05799	-	ko00000,ko03000	FCD
PHCCMDOK_00752	0.0	-	-	-	S	-	-	-	Tripartite ATP-independent periplasmic transporter, DctM component
PHCCMDOK_00753	3.06e-237	-	-	-	S	ko:K07080	-	ko00000	NMT1-like family
PHCCMDOK_00754	9.4e-199	citR	-	-	K	ko:K19242	-	ko00000,ko03000	Transcriptional regulator
PHCCMDOK_00755	2.29e-255	citA	2.3.3.1	-	C	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Belongs to the citrate synthase family
PHCCMDOK_00756	1.57e-266	-	-	-	G	-	-	-	COG1593 TRAP-type C4-dicarboxylate transport system, large permease component
PHCCMDOK_00757	1e-96	-	-	-	G	-	-	-	Tripartite ATP-independent periplasmic transporters, DctQ component
PHCCMDOK_00758	2.94e-236	-	-	-	G	-	-	-	Bacterial extracellular solute-binding protein, family 7
PHCCMDOK_00759	1.22e-148	kdgR	-	-	K	-	-	-	FCD
PHCCMDOK_00760	7.95e-250	yjmC	1.1.1.350	-	C	ko:K00073	ko00230,ko01120,map00230,map01120	ko00000,ko00001,ko01000	Belongs to the LDH2 MDH2 oxidoreductase family
PHCCMDOK_00761	0.0	mcpA	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis protein
PHCCMDOK_00762	3.34e-112	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PHCCMDOK_00763	1.26e-80	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PHCCMDOK_00764	5.23e-217	-	-	-	S	-	-	-	Domain of unknown function (DUF4179)
PHCCMDOK_00765	4.83e-98	-	-	-	S	-	-	-	Domain of unknown function (DU1801)
PHCCMDOK_00766	3.19e-146	-	-	-	S	-	-	-	CGNR zinc finger
PHCCMDOK_00768	1.64e-108	-	-	-	-	-	-	-	-
PHCCMDOK_00769	4.74e-21	-	-	-	K	ko:K07729	-	ko00000,ko03000	transcriptional
PHCCMDOK_00771	0.0	-	-	-	T	-	-	-	Carbon starvation protein
PHCCMDOK_00772	2.58e-173	-	-	-	T	ko:K07705	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG3279 Response regulator of the LytR AlgR family
PHCCMDOK_00773	0.0	lytS	2.7.13.3	-	T	ko:K07704	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHCCMDOK_00774	2.98e-135	-	-	-	K	-	-	-	Transcriptional regulator
PHCCMDOK_00775	0.0	ydfJ	-	-	S	ko:K07003	-	ko00000	MMPL family
PHCCMDOK_00776	3.55e-262	-	-	-	S	-	-	-	domain protein
PHCCMDOK_00777	8.4e-234	oppF3	-	-	E	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHCCMDOK_00778	8.96e-226	oppD3	-	-	P	ko:K02031,ko:K16202	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHCCMDOK_00779	2.95e-211	-	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PHCCMDOK_00780	7.33e-221	appB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PHCCMDOK_00781	0.0	-	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
PHCCMDOK_00782	5.96e-12	-	-	-	-	-	-	-	-
PHCCMDOK_00783	1.21e-173	-	-	-	S	-	-	-	Sulfite exporter TauE/SafE
PHCCMDOK_00784	2.73e-25	-	-	-	-	-	-	-	-
PHCCMDOK_00785	2.29e-225	-	-	-	L	ko:K07496	-	ko00000	Transposase
PHCCMDOK_00786	1.24e-118	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
PHCCMDOK_00788	4.51e-156	-	-	-	G	-	-	-	Class II Aldolase and Adducin N-terminal domain
PHCCMDOK_00789	4e-267	-	-	-	G	-	-	-	COG1593 TRAP-type C4-dicarboxylate transport system, large permease component
PHCCMDOK_00790	1.01e-98	-	-	-	G	-	-	-	Tripartite ATP-independent periplasmic transporters, DctQ component
PHCCMDOK_00791	6.64e-234	-	-	-	G	-	-	-	COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component
PHCCMDOK_00792	1.4e-238	tdh	1.1.1.14	-	E	ko:K00008	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko00002,ko01000	Dehydrogenase
PHCCMDOK_00793	4.89e-141	-	-	-	K	-	-	-	FCD domain
PHCCMDOK_00794	1.36e-303	-	2.7.1.219, 2.7.1.220	-	S	ko:K22129	-	ko00000,ko01000	Putative nucleotide-binding of sugar-metabolising enzyme
PHCCMDOK_00795	2.64e-203	-	-	-	-	-	-	-	-
PHCCMDOK_00796	9.68e-172	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PHCCMDOK_00797	2.67e-165	-	-	-	Q	ko:K15256	-	ko00000,ko01000,ko03016	O-methyltransferase
PHCCMDOK_00798	1.06e-71	-	-	-	L	-	-	-	Restriction endonuclease
PHCCMDOK_00799	4.53e-46	-	-	-	-	-	-	-	-
PHCCMDOK_00800	3.14e-147	-	-	-	S	ko:K07043	-	ko00000	WLM domain
PHCCMDOK_00801	0.0	hsdR	3.1.21.3	-	L	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
PHCCMDOK_00802	4.52e-139	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
PHCCMDOK_00805	1.12e-104	smpB	-	-	O	ko:K03664	-	ko00000	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
PHCCMDOK_00806	2.07e-79	-	-	-	L	ko:K07496	-	ko00000	Transposase
PHCCMDOK_00807	2.03e-78	-	-	-	S	ko:K15977	-	ko00000	DoxX
PHCCMDOK_00808	0.0	rnr	-	-	K	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PHCCMDOK_00809	1.24e-177	est	3.1.1.1	-	S	ko:K03928	-	ko00000,ko01000	Carboxylesterase
PHCCMDOK_00810	1.06e-176	-	3.1.1.1	-	S	ko:K03928	-	ko00000,ko01000	COG1647 Esterase lipase
PHCCMDOK_00811	1.05e-224	yceB	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PHCCMDOK_00812	1.94e-37	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase subunit SecG
PHCCMDOK_00813	4.54e-100	yclD	-	-	-	-	-	-	-
PHCCMDOK_00814	0.0	-	-	-	S	ko:K07793	ko02020,map02020	ko00000,ko00001,ko02000	Tripartite tricarboxylate transporter TctA family
PHCCMDOK_00815	1.43e-95	-	-	-	S	-	-	-	Tripartite tricarboxylate transporter TctB family
PHCCMDOK_00816	7.54e-217	-	-	-	S	-	-	-	Tripartite tricarboxylate transporter family receptor
PHCCMDOK_00817	2.93e-281	-	4.2.1.158	-	M	ko:K20022	-	ko00000,ko01000	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
PHCCMDOK_00818	0.0	-	-	-	C	ko:K22187	ko00040,map00040	ko00000,ko00001,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PHCCMDOK_00819	1.13e-218	-	4.3.3.7	-	EM	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Dihydrodipicolinate synthetase family
PHCCMDOK_00820	5.53e-151	-	-	-	K	-	-	-	FCD
PHCCMDOK_00821	9.59e-305	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PHCCMDOK_00822	0.0	gpmI	5.4.2.12	-	G	ko:K15633	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of 2-phosphoglycerate and
PHCCMDOK_00823	3.78e-169	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PHCCMDOK_00824	5.42e-275	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
PHCCMDOK_00825	4.9e-239	gapA	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PHCCMDOK_00826	2.48e-229	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain
PHCCMDOK_00827	7.17e-258	rapA	-	-	S	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	ko00000,ko00001,ko01000	Response regulator aspartate phosphatase
PHCCMDOK_00829	3.02e-53	XAC3035	-	-	O	ko:K06191	-	ko00000	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
PHCCMDOK_00830	2.81e-296	sigL	-	-	K	ko:K03092	ko02020,ko05111,map02020,map05111	ko00000,ko00001,ko03021	COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog
PHCCMDOK_00832	6.73e-133	clpP	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PHCCMDOK_00833	1.04e-288	-	-	-	E	-	-	-	Peptidase dimerisation domain
PHCCMDOK_00834	8.04e-72	-	-	-	S	ko:K09940	-	ko00000	Domain of unknown function (DUF4870)
PHCCMDOK_00835	9.01e-272	opuCA	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1125 ABC-type proline glycine betaine transport systems, ATPase components
PHCCMDOK_00836	2.12e-138	opuCB	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1174 ABC-type proline glycine betaine transport systems, permease component
PHCCMDOK_00837	3.91e-215	opuCC	-	-	M	ko:K05845	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1732 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PHCCMDOK_00838	2.76e-142	opuCD	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1174 ABC-type proline glycine betaine transport systems, permease component
PHCCMDOK_00839	4.57e-51	crh	-	-	G	ko:K11184	-	ko00000	Phosphocarrier protein Chr
PHCCMDOK_00840	1.97e-228	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
PHCCMDOK_00841	3e-225	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
PHCCMDOK_00842	4.57e-213	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
PHCCMDOK_00843	4.29e-116	yvcI	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	Nudix hydrolase
PHCCMDOK_00844	8.31e-226	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PHCCMDOK_00845	2.1e-247	yvcD	-	-	S	-	-	-	COG0457 FOG TPR repeat
PHCCMDOK_00846	1.86e-305	cypC	1.11.2.4	-	Q	ko:K15629	-	ko00000,ko00199,ko01000	Cytochrome P450
PHCCMDOK_00847	3.42e-156	ydeD	-	-	EG	-	-	-	COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PHCCMDOK_00848	2.07e-136	-	-	-	K	-	-	-	AraC-like ligand binding domain
PHCCMDOK_00849	8.46e-161	-	-	-	K	-	-	-	FR47-like protein
PHCCMDOK_00850	3.31e-143	hisI	3.5.4.19, 3.6.1.31	-	E	ko:K01496,ko:K11755	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	belongs to the PRA-CH family
PHCCMDOK_00851	1.05e-171	hisF	-	-	E	ko:K02500	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PHCCMDOK_00852	2.89e-163	hisA	5.3.1.16	-	E	ko:K01814	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PHCCMDOK_00853	5.92e-142	hisH	-	-	E	ko:K02501	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PHCCMDOK_00854	3.1e-138	hisB	4.2.1.19	-	E	ko:K01693	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	imidazoleglycerol-phosphate dehydratase
PHCCMDOK_00855	3e-290	hisD	1.1.1.23, 1.1.1.308	-	E	ko:K00013,ko:K15509	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PHCCMDOK_00856	3.41e-144	hisG	2.4.2.17	-	E	ko:K00765,ko:K02502	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
PHCCMDOK_00857	6.37e-278	hisZ	-	-	E	ko:K02502	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
PHCCMDOK_00858	1.43e-105	yvoF	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	COG0110 Acetyltransferase (isoleucine patch superfamily)
PHCCMDOK_00859	2.32e-151	ppaX	3.6.1.1	-	S	ko:K06019	ko00190,map00190	ko00000,ko00001,ko01000	Hydrolyzes pyrophosphate formed during P-Ser-HPr dephosphorylation by HPrK P. Might play a role in controlling the intracellular pyrophosphate pool
PHCCMDOK_00860	2.78e-204	yvoD	-	-	P	-	-	-	COG0370 Fe2 transport system protein B
PHCCMDOK_00861	8.3e-190	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PHCCMDOK_00862	2.18e-218	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Also phosphorylates dephosphorylates the HPr-like catabolite repression protein crh on a specific serine residue. Therefore, by controlling the phosphorylation state of HPr and crh, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PHCCMDOK_00863	2.08e-63	yvlD	-	-	S	ko:K08972	-	ko00000	Membrane
PHCCMDOK_00864	7.33e-16	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain protein
PHCCMDOK_00865	1.29e-200	yvlB	-	-	S	-	-	-	Putative adhesin
PHCCMDOK_00866	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PHCCMDOK_00867	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PHCCMDOK_00868	3.73e-216	yoaV3	-	-	EG	-	-	-	EamA-like transporter family
PHCCMDOK_00869	3.27e-258	minJ	-	-	O	-	-	-	COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PHCCMDOK_00870	0.0	ctpB	3.4.21.102	-	M	ko:K03797	-	ko00000,ko01000,ko01002	Belongs to the peptidase S41A family
PHCCMDOK_00871	3.87e-163	-	-	-	D	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	peptidase
PHCCMDOK_00872	1.27e-193	ftsX	-	-	D	ko:K09811	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03036	Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
PHCCMDOK_00873	2.48e-159	ftsE	-	-	D	ko:K09812	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03036	cell division ATP-binding protein FtsE
PHCCMDOK_00874	5.34e-188	yvjA	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2179)
PHCCMDOK_00875	1.02e-232	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PHCCMDOK_00876	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PHCCMDOK_00877	6.07e-126	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PHCCMDOK_00878	4.78e-42	cspC	-	-	K	ko:K03704	-	ko00000,ko03000	cold-shock protein
PHCCMDOK_00879	2.56e-187	-	-	-	-	-	-	-	-
PHCCMDOK_00881	3.64e-86	fliS	-	-	N	ko:K02422	ko02040,map02040	ko00000,ko00001,ko02035	flagellar protein FliS
PHCCMDOK_00882	0.0	fliD	-	-	N	ko:K02407	ko02040,map02040	ko00000,ko00001,ko02035	morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
PHCCMDOK_00883	2.52e-63	flaG	-	-	N	ko:K06603	-	ko00000,ko02035	flagellar protein FlaG
PHCCMDOK_00884	2.29e-44	csrA	-	-	T	ko:K03563	ko02020,ko02025,ko02026,ko05111,map02020,map02025,map02026,map05111	ko00000,ko00001,ko03019	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
PHCCMDOK_00885	7.62e-97	fliW	-	-	S	ko:K13626	-	ko00000,ko02035	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
PHCCMDOK_00886	3.43e-239	flgL	-	-	N	ko:K02397	ko02040,map02040	ko00000,ko00001,ko02035	Belongs to the bacterial flagellin family
PHCCMDOK_00887	0.0	flgK	-	-	N	ko:K02396	ko02040,map02040	ko00000,ko00001,ko02035	flagellar hook-associated protein
PHCCMDOK_00888	2.18e-07	yvyG	-	-	NOU	-	-	-	Flagellar biosynthesis protein FlgN
PHCCMDOK_00889	3.56e-52	-	-	-	N	ko:K02398	ko02020,ko02025,ko02026,ko02040,map02020,map02025,map02026,map02040	ko00000,ko00001,ko02035	Anti-sigma-28 factor, FlgM
PHCCMDOK_00890	4.48e-98	yvyF	-	-	S	-	-	-	flagellar protein
PHCCMDOK_00891	1.43e-160	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Phosphoribosyl transferase domain
PHCCMDOK_00892	1.11e-307	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	COG4098 Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
PHCCMDOK_00893	4.62e-189	degV	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_00894	4.63e-162	degU	-	-	KT	ko:K02479,ko:K07692	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PHCCMDOK_00895	1.02e-256	degS	2.7.13.3	-	T	ko:K07683,ko:K07777	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Member of the two-component regulatory system DegS DegU, which plays an important role in the transition growth phase
PHCCMDOK_00896	4.51e-148	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	Domain of unknown function (DUF1949)
PHCCMDOK_00897	5.28e-132	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PHCCMDOK_00898	2.13e-309	oppA1	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0747 ABC-type dipeptide transport system, periplasmic component
PHCCMDOK_00899	2.87e-162	oppC	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	binding-protein-dependent transport systems inner membrane component
PHCCMDOK_00900	1.3e-176	oppB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PHCCMDOK_00901	9.43e-169	oppF	-	-	P	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHCCMDOK_00902	3.01e-185	oppD	-	-	P	ko:K02031,ko:K16202	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHCCMDOK_00903	5.98e-105	-	-	-	K	ko:K03718	-	ko00000,ko03000	helix_turn_helix ASNC type
PHCCMDOK_00904	3.2e-244	ywtF_2	-	-	K	-	-	-	Transcriptional regulator
PHCCMDOK_00905	0.0	acsA	6.2.1.1	-	I	ko:K01895	ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko01004	COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases
PHCCMDOK_00906	2.34e-154	acuA	-	-	K	ko:K04766	-	ko00000,ko01000	Part of the acuABC operon, which is possibly involved in the breakdown of acetoin and butanediol. Acts as an acetyltransferase inactivating acetyl-CoA synthetase AcsA via acetylation at a Lys residue
PHCCMDOK_00907	1.55e-142	acuB	-	-	S	ko:K04767	-	ko00000	Acetoin utilization protein AcuB
PHCCMDOK_00908	1.95e-294	acuC	-	-	BQ	ko:K04768	-	ko00000	histone deacetylase
PHCCMDOK_00909	5.04e-237	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
PHCCMDOK_00910	1.18e-251	aroA	2.5.1.54, 5.4.99.5	-	E	ko:K03856,ko:K13853	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate
PHCCMDOK_00911	6.48e-27	ytxH	-	-	S	-	-	-	COG4980 Gas vesicle protein
PHCCMDOK_00912	1.38e-83	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PHCCMDOK_00913	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
PHCCMDOK_00914	0.0	sftA	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
PHCCMDOK_00915	9.11e-134	ytpR	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PHCCMDOK_00916	5.66e-187	ytpQ	-	-	S	-	-	-	Belongs to the UPF0354 family
PHCCMDOK_00917	1.15e-73	ytpP	-	-	CO	-	-	-	Thioredoxin
PHCCMDOK_00918	1.06e-183	-	-	-	S	ko:K07035	-	ko00000	Phosphotransferase system, EIIC
PHCCMDOK_00919	7.88e-100	ytoQ	-	-	S	-	-	-	Nucleoside 2-deoxyribosyltransferase YtoQ
PHCCMDOK_00920	6.99e-112	yjjX	-	-	F	-	-	-	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
PHCCMDOK_00921	4.52e-262	pepA	3.4.11.7	-	G	ko:K01261,ko:K01269	-	ko00000,ko01000,ko01002	COG1363 Cellulase M and related proteins
PHCCMDOK_00922	5.27e-64	ytzB	-	-	-	-	-	-	-
PHCCMDOK_00923	2.52e-155	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PHCCMDOK_00925	9.14e-197	ytmP	-	-	M	-	-	-	Phosphotransferase
PHCCMDOK_00926	1.04e-209	purU	3.5.1.10	-	F	ko:K01433	ko00630,ko00670,map00630,map00670	ko00000,ko00001,ko01000	Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4)
PHCCMDOK_00927	2.27e-161	-	-	-	IQ	-	-	-	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PHCCMDOK_00928	7.62e-68	-	-	-	S	-	-	-	PFAM Uncharacterised protein family UPF0150
PHCCMDOK_00929	1.65e-268	acoC	2.3.1.12	-	C	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PHCCMDOK_00930	6.01e-246	acoB	-	-	C	ko:K21417	-	ko00000,ko01000	COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
PHCCMDOK_00931	1.28e-224	acoA	-	-	C	ko:K21416	-	ko00000,ko01000	COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
PHCCMDOK_00932	1.57e-276	lpdA	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PHCCMDOK_00933	0.0	acoR	-	-	KQ	ko:K21405	-	ko00000,ko03000	COG3284 Transcriptional activator of acetoin glycerol metabolism
PHCCMDOK_00934	4.53e-148	cidB	-	-	M	-	-	-	effector of murein hydrolase
PHCCMDOK_00935	1.41e-84	-	-	-	S	ko:K06518	-	ko00000,ko02000	Increases the activity of extracellular murein hydrolases possibly by mediating their export via hole formation. Inhibited by the antiholin-like proteins LrgAB. In an unstressed cell, the LrgAB products probably inhibit the function of the CidA protein. When a cell is stressed by the addition of antibiotics or by other factors in the environment, CidA possibly oligomerizes within the bacterial cell membrane, creating lesions that disrupt the proton motive force, which in turn results in loss of cell viability. These lesions are also hypothesized to regulate the subsequent cell lysis by either allowing the murein hydrolases access to the cell wall substrate and or regulating their activity by a
PHCCMDOK_00936	5.21e-137	ytlP	3.1.4.58	-	J	ko:K01975	-	ko00000,ko01000,ko03016	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
PHCCMDOK_00937	7.62e-219	ytkP	2.5.1.47	-	E	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
PHCCMDOK_00938	9.88e-206	ydeE	-	-	K	ko:K13653	-	ko00000,ko03000	AraC family transcriptional regulator
PHCCMDOK_00939	6.3e-123	-	-	-	C	-	-	-	oxidoreductases (related to aryl-alcohol dehydrogenases)
PHCCMDOK_00940	1.28e-67	-	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferases, including N-acetylases of ribosomal proteins
PHCCMDOK_00941	2.76e-99	fosB	-	-	H	ko:K11210,ko:K21252	-	ko00000,ko01000,ko01504	Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor
PHCCMDOK_00942	4.69e-43	ytzE	-	-	K	-	-	-	COG1349 Transcriptional regulators of sugar metabolism
PHCCMDOK_00943	5.85e-169	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
PHCCMDOK_00944	4.05e-266	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
PHCCMDOK_00945	9.29e-253	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
PHCCMDOK_00946	0.0	ytgP	-	-	S	ko:K03328,ko:K06409	-	ko00000,ko02000	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PHCCMDOK_00947	2.09e-208	yvrE	-	-	G	ko:K14274	ko00040,map00040	ko00000,ko00001,ko01000	SMP-30/Gluconolaconase/LRE-like region
PHCCMDOK_00948	2.85e-89	yugU	-	-	S	-	-	-	Uncharacterised protein family UPF0047
PHCCMDOK_00949	1.46e-287	yhaA1	-	-	E	ko:K01436	-	ko00000,ko01000,ko01002	COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
PHCCMDOK_00950	1.31e-259	ytfP	-	-	S	ko:K07007	-	ko00000	HI0933-like protein
PHCCMDOK_00951	2.95e-48	-	-	-	-	-	-	-	-
PHCCMDOK_00952	9.19e-99	-	-	-	S	-	-	-	An automated process has identified a potential problem with this gene model
PHCCMDOK_00953	9.49e-169	-	-	-	S	-	-	-	Protein of unknown function (DUF3100)
PHCCMDOK_00954	7e-304	-	-	-	S	ko:K12941	-	ko00000,ko01002	amidohydrolase
PHCCMDOK_00955	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
PHCCMDOK_00956	2.07e-221	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
PHCCMDOK_00957	1.95e-244	yttB	-	-	EGP	-	-	-	Major facilitator superfamily
PHCCMDOK_00959	2.09e-131	ytqB	-	-	J	-	-	-	Putative rRNA methylase
PHCCMDOK_00960	9.47e-137	yvdA	4.2.1.1	-	P	ko:K01673	ko00910,map00910	ko00000,ko00001,ko01000	Reversible hydration of carbon dioxide
PHCCMDOK_00961	1.3e-194	ytpA	3.1.1.5	-	I	ko:K01048	ko00564,map00564	ko00000,ko00001,ko01000	Alpha beta hydrolase
PHCCMDOK_00962	2.18e-94	ytoA	-	-	S	-	-	-	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
PHCCMDOK_00963	2.35e-286	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PHCCMDOK_00964	0.0	pckA	4.1.1.49	-	C	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
PHCCMDOK_00965	5.08e-192	ytmA	-	-	E	-	-	-	COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases
PHCCMDOK_00966	9.36e-229	ytlA	-	-	P	ko:K02051	-	ko00000,ko00002,ko02000	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components
PHCCMDOK_00967	6.58e-175	ytlC	3.6.3.36	-	P	ko:K02049,ko:K10831,ko:K15555	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
PHCCMDOK_00968	1.53e-175	ytlD	-	-	P	ko:K02050	-	ko00000,ko00002,ko02000	COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component
PHCCMDOK_00969	1.96e-108	ytkD	3.6.1.55	-	L	ko:K03574	-	ko00000,ko01000,ko03400	Belongs to the Nudix hydrolase family
PHCCMDOK_00970	1.58e-284	ymfD	-	-	EGP	ko:K08221	-	ko00000,ko02000	COG0477 Permeases of the major facilitator superfamily
PHCCMDOK_00971	5.16e-110	ywpF	-	-	S	-	-	-	YwpF-like protein
PHCCMDOK_00973	7.16e-280	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
PHCCMDOK_00974	2.15e-144	dgk	2.7.1.113	-	F	ko:K15518	ko00230,map00230	ko00000,ko00001,ko01000	Deoxyguanosine kinase
PHCCMDOK_00975	1.52e-154	dck	2.7.1.74, 2.7.1.76	-	F	ko:K15519	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko01000	Deoxycytidine kinase
PHCCMDOK_00976	2.62e-138	-	-	-	V	ko:K07448	-	ko00000,ko02048	Restriction endonuclease
PHCCMDOK_00977	5.59e-223	yclQ	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG4607 ABC-type enterochelin transport system, periplasmic component
PHCCMDOK_00978	1.19e-192	yclP	3.6.3.34	-	P	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PHCCMDOK_00979	5.22e-197	yclO	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PHCCMDOK_00980	1.01e-206	yclN	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PHCCMDOK_00981	1.66e-128	pgpB3	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	COG0671 Membrane-associated phospholipid phosphatase
PHCCMDOK_00982	1.61e-296	tcyP	-	-	U	ko:K06956	-	ko00000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PHCCMDOK_00983	1.49e-97	-	-	-	S	-	-	-	Putative small multi-drug export protein
PHCCMDOK_00984	1.4e-95	-	-	-	S	-	-	-	DinB superfamily
PHCCMDOK_00985	1.34e-76	-	-	-	S	-	-	-	Protein of unknown function (DUF1516)
PHCCMDOK_00986	1.42e-108	yneJ	-	-	O	-	-	-	COG4846 Membrane protein involved in cytochrome C biogenesis
PHCCMDOK_00987	3.16e-207	ctaB	2.5.1.141	-	O	ko:K02257	ko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714	ko00000,ko00001,ko00002,ko01000,ko01006,ko03029	Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group
PHCCMDOK_00988	1.71e-211	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	Inorganic pyrophosphatase
PHCCMDOK_00989	1.2e-48	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
PHCCMDOK_00991	1.26e-26	-	-	-	-	-	-	-	-
PHCCMDOK_00992	1.71e-91	yugN	-	-	S	-	-	-	YugN-like family
PHCCMDOK_00993	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
PHCCMDOK_00994	7.51e-262	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
PHCCMDOK_00995	1.16e-286	yugJ	-	-	C	ko:K19955	-	ko00000,ko01000	oxidoreductases, Fe-dependent alcohol dehydrogenase family
PHCCMDOK_00996	2.41e-45	yuzA	-	-	S	ko:K09779	-	ko00000	Domain of unknown function (DUF378)
PHCCMDOK_00997	7.86e-77	yugI	-	-	J	ko:K07570,ko:K07571	-	ko00000	RNA binding protein (contains ribosomal protein S1 domain)
PHCCMDOK_00998	8.68e-257	yfmL	-	-	L	-	-	-	COG0513 Superfamily II DNA and RNA helicases
PHCCMDOK_00999	6.03e-175	thiM	2.7.1.50	-	H	ko:K00878	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PHCCMDOK_01000	6.4e-281	yugH	-	-	E	ko:K10907	-	ko00000,ko01000,ko01007	Aminotransferase
PHCCMDOK_01001	4.23e-110	alaR	-	-	K	-	-	-	Transcriptional regulator
PHCCMDOK_01002	6.22e-107	-	-	-	L	-	-	-	Transposase IS200 like
PHCCMDOK_01003	1.06e-110	luxS	4.4.1.21	-	T	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PHCCMDOK_01004	1.73e-182	-	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
PHCCMDOK_01005	1.81e-55	hbs	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PHCCMDOK_01006	5.33e-288	yuiF	-	-	S	ko:K07084	-	ko00000,ko02000	antiporter
PHCCMDOK_01007	1.46e-37	-	-	-	L	ko:K07497	-	ko00000	Transposase and inactivated derivatives
PHCCMDOK_01010	1.21e-18	-	-	-	G	ko:K08225	-	ko00000,ko02000	transmembrane transporter activity
PHCCMDOK_01011	3.89e-99	-	-	-	-	-	-	-	-
PHCCMDOK_01012	3.58e-74	-	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PHCCMDOK_01013	2.86e-305	-	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_01014	4.58e-306	gabT	2.6.1.19	-	E	ko:K00823	ko00250,ko00410,ko00640,ko00650,ko01100,ko01120,map00250,map00410,map00640,map00650,map01100,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PHCCMDOK_01016	2.62e-139	lip	3.1.1.3	-	S	ko:K01046	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko00002,ko01000	acetyltransferases and hydrolases with the alpha beta hydrolase fold
PHCCMDOK_01017	6.85e-07	-	-	-	-	-	-	-	-
PHCCMDOK_01019	2.8e-154	-	-	-	S	-	-	-	Glycosyltransferase like family
PHCCMDOK_01020	0.0	-	-	-	S	-	-	-	Sugar transport-related sRNA regulator N-term
PHCCMDOK_01021	1.73e-273	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PHCCMDOK_01022	0.0	fadN	1.1.1.35	-	I	ko:K07516	ko00071,ko00362,ko00650,ko01100,ko01120,ko01200,ko01212,map00071,map00362,map00650,map01100,map01120,map01200,map01212	ko00000,ko00001,ko00002,ko01000	3-hydroxyacyl-CoA dehydrogenase
PHCCMDOK_01023	9.31e-269	fadA	2.3.1.16	-	I	ko:K00632	ko00071,ko00280,ko00281,ko00362,ko00592,ko00642,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00362,map00592,map00642,map01100,map01110,map01120,map01130,map01212	ko00000,ko00001,ko00002,ko01000	Belongs to the thiolase family
PHCCMDOK_01024	0.0	fadE	1.3.8.1	-	I	ko:K00248	ko00071,ko00280,ko00650,ko01100,ko01110,ko01120,ko01200,ko01212,map00071,map00280,map00650,map01100,map01110,map01120,map01200,map01212	ko00000,ko00001,ko01000	acyl-CoA dehydrogenase
PHCCMDOK_01025	5.61e-82	yusI	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	Belongs to the ArsC family
PHCCMDOK_01026	6.74e-84	gcvH	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate
PHCCMDOK_01027	1.1e-234	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PHCCMDOK_01028	8.61e-147	metI	-	-	P	ko:K02069,ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG2011 ABC-type metal ion transport system, permease component
PHCCMDOK_01029	1.39e-197	metQ	-	-	P	ko:K02072,ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the NlpA lipoprotein family
PHCCMDOK_01030	1.55e-122	-	-	-	S	-	-	-	Cobalamin adenosyltransferase
PHCCMDOK_01031	1.78e-211	-	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component
PHCCMDOK_01032	1.67e-79	yurZ	-	-	S	-	-	-	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
PHCCMDOK_01033	2.3e-185	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component
PHCCMDOK_01034	5.41e-310	sufD	-	-	O	ko:K07033,ko:K09015	-	ko00000	assembly protein SufD
PHCCMDOK_01035	1.44e-297	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PHCCMDOK_01036	2.18e-101	nifU	-	-	C	ko:K04488	-	ko00000	COG0822 NifU homolog involved in Fe-S cluster formation
PHCCMDOK_01037	0.0	sufB	-	-	O	ko:K07033,ko:K09014	-	ko00000	FeS cluster assembly
PHCCMDOK_01038	1.21e-304	aceA	4.1.3.1	-	C	ko:K01637	ko00630,ko01100,ko01110,ko01120,ko01200,map00630,map01100,map01110,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Isocitrate lyase
PHCCMDOK_01039	8.78e-23	-	-	-	S	-	-	-	YhfH-like protein
PHCCMDOK_01040	3.83e-68	licT	-	-	K	ko:K03488	-	ko00000,ko03000	transcriptional antiterminator
PHCCMDOK_01041	1.73e-106	bglH	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PHCCMDOK_01042	1.15e-176	-	-	-	Q	-	-	-	Methyltransferase domain
PHCCMDOK_01043	4.68e-234	-	-	-	C	ko:K19265	-	ko00000,ko01000	Aldo/keto reductase family
PHCCMDOK_01044	5.51e-175	msmR	-	-	K	-	-	-	AraC family transcriptional regulator
PHCCMDOK_01045	9.93e-219	-	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
PHCCMDOK_01046	2.1e-212	-	-	-	S	-	-	-	Phosphotransferase enzyme family
PHCCMDOK_01047	2.69e-84	-	-	-	H	-	-	-	RibD C-terminal domain
PHCCMDOK_01048	4.37e-45	-	-	-	S	-	-	-	Pathogenicity locus
PHCCMDOK_01049	8.5e-55	-	-	-	S	-	-	-	Family of unknown function (DUF5344)
PHCCMDOK_01050	2.05e-200	-	-	-	S	-	-	-	LXG domain of WXG superfamily
PHCCMDOK_01051	1.86e-56	-	-	-	-	-	-	-	-
PHCCMDOK_01052	8.46e-53	-	-	-	-	-	-	-	-
PHCCMDOK_01053	1.03e-53	-	-	-	-	-	-	-	-
PHCCMDOK_01055	7.58e-190	-	-	-	-	-	-	-	-
PHCCMDOK_01056	1.26e-67	-	-	-	-	-	-	-	-
PHCCMDOK_01057	1.7e-84	-	-	-	S	-	-	-	Domain of unknown function (DUF5082)
PHCCMDOK_01058	2.02e-214	yunF	-	-	S	-	-	-	Protein of unknown function DUF72
PHCCMDOK_01059	7.85e-177	yunE	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
PHCCMDOK_01060	0.0	yunD	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PHCCMDOK_01061	7.97e-65	yunC	-	-	S	-	-	-	Domain of unknown function (DUF1805)
PHCCMDOK_01062	2.84e-200	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PHCCMDOK_01063	2.2e-115	dfrA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PHCCMDOK_01064	1.38e-175	yunB	-	-	S	-	-	-	Sporulation protein YunB (Spo_YunB)
PHCCMDOK_01065	0.0	-	-	-	C	ko:K18218	-	ko00000,ko00002,ko01504,ko02000	Na+/H+ antiporter family
PHCCMDOK_01066	4.04e-255	lytH	-	-	M	ko:K21472	-	ko00000,ko01000,ko01002,ko01011	Peptidase, M23
PHCCMDOK_01067	7.35e-221	lipA	2.8.1.8	-	H	ko:K03644	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
PHCCMDOK_01068	4.63e-119	yutC	-	-	S	-	-	-	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PHCCMDOK_01069	6.09e-67	yutD	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_01070	1.79e-59	-	-	-	-	-	-	-	-
PHCCMDOK_01071	1.71e-95	yutE	-	-	S	-	-	-	Protein of unknown function DUF86
PHCCMDOK_01072	1.59e-165	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PHCCMDOK_01073	1.37e-109	yutG	3.1.3.27	-	I	ko:K01095	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	COG1267 Phosphatidylglycerophosphatase A and related proteins
PHCCMDOK_01074	3.55e-258	yutH	-	-	S	-	-	-	Spore coat protein
PHCCMDOK_01075	2.95e-304	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
PHCCMDOK_01076	4.81e-252	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
PHCCMDOK_01077	4.67e-202	thrB	2.7.1.39	-	E	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PHCCMDOK_01078	4.25e-49	yutI	-	-	O	-	-	-	COG0694 Thioredoxin-like proteins and domains
PHCCMDOK_01079	5.36e-68	yuzD	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_01080	0.0	yutJ	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
PHCCMDOK_01081	3.63e-54	yuzB	-	-	S	-	-	-	Belongs to the UPF0349 family
PHCCMDOK_01082	9.92e-57	-	-	-	-	-	-	-	-
PHCCMDOK_01083	1.52e-204	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PHCCMDOK_01084	1.47e-266	mqnE	2.5.1.120	-	H	ko:K18285	ko00130,ko01110,map00130,map01110	ko00000,ko00001,ko01000	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
PHCCMDOK_01085	3.32e-13	-	-	-	S	-	-	-	Spo0E like sporulation regulatory protein
PHCCMDOK_01086	2.5e-79	yutM	-	-	S	ko:K13628	-	ko00000,ko03016	Belongs to the HesB IscA family
PHCCMDOK_01087	4.06e-140	yckA	-	-	P	ko:K10009	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0765 ABC-type amino acid transport system, permease component
PHCCMDOK_01088	1.34e-197	-	-	-	ET	ko:K02424	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko02035	Belongs to the bacterial solute-binding protein 3 family
PHCCMDOK_01089	0.0	mtlA	2.7.1.197	-	G	ko:K02799,ko:K02800	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG2213 Phosphotransferase system, mannitol-specific IIBC component
PHCCMDOK_01090	0.0	mtlR	-	-	K	ko:K03483	-	ko00000,ko03000	transcriptional regulator, MtlR
PHCCMDOK_01091	2.29e-92	mtlF	2.7.1.197	-	G	ko:K02798	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG4668 Mannitol fructose-specific phosphotransferase system, IIA domain
PHCCMDOK_01092	8.79e-262	mtlD	1.1.1.17	-	G	ko:K00009	ko00051,map00051	ko00000,ko00001,ko01000	COG0246 Mannitol-1-phosphate altronate dehydrogenases
PHCCMDOK_01093	5.27e-236	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	reductase
PHCCMDOK_01094	1.27e-292	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
PHCCMDOK_01095	2.61e-61	yuiB	-	-	S	-	-	-	Putative membrane protein
PHCCMDOK_01096	1.84e-140	yuiC	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_01097	1.5e-101	yuiD	-	-	S	ko:K09775	-	ko00000	protein conserved in bacteria
PHCCMDOK_01098	0.0	pepA	3.4.11.1	-	E	ko:K01255	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
PHCCMDOK_01099	5.93e-60	-	-	-	-	-	-	-	-
PHCCMDOK_01100	1.41e-144	-	-	-	M	-	-	-	Glycosyl transferase family 2
PHCCMDOK_01101	1.52e-301	-	1.1.1.136	-	M	ko:K13015	ko00520,map00520	ko00000,ko00001,ko01000,ko01005	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PHCCMDOK_01102	1.02e-84	ybbJ	-	-	J	-	-	-	acetyltransferase
PHCCMDOK_01103	8.15e-250	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PHCCMDOK_01104	1.07e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2642)
PHCCMDOK_01105	2.58e-33	-	-	-	-	-	-	-	-
PHCCMDOK_01106	4.06e-306	VCP	-	-	O	-	-	-	AAA domain (dynein-related subfamily)
PHCCMDOK_01107	6.24e-119	ycsK	-	-	E	-	-	-	anatomical structure formation involved in morphogenesis
PHCCMDOK_01108	2.4e-155	-	-	-	K	-	-	-	helix_turn_helix isocitrate lyase regulation
PHCCMDOK_01109	2.6e-208	kdgK	2.7.1.45	-	G	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	COG0524 Sugar kinases, ribokinase family
PHCCMDOK_01110	6.59e-130	-	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	KDPG and KHG aldolase
PHCCMDOK_01111	8.16e-289	dgoD	4.2.1.6	-	M	ko:K01684	ko00052,ko01100,ko01120,map00052,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the mandelate racemase muconate lactonizing enzyme family
PHCCMDOK_01112	1.4e-247	gntU	-	-	EG	ko:K03299,ko:K06156	-	ko00000,ko02000	COG2610 H gluconate symporter and related permeases
PHCCMDOK_01113	3.73e-198	-	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
PHCCMDOK_01114	9.8e-116	-	-	-	S	-	-	-	Predicted membrane protein (DUF2243)
PHCCMDOK_01115	8.46e-160	-	-	-	S	ko:K02351	-	ko00000	Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG)
PHCCMDOK_01116	1.61e-308	-	2.7.13.3	-	T	ko:K02484	-	ko00000,ko01000,ko01001,ko02022	COG0642 Signal transduction histidine kinase
PHCCMDOK_01117	3.55e-162	-	-	-	T	-	-	-	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PHCCMDOK_01118	4.79e-214	-	-	-	K	-	-	-	DJ-1/PfpI family
PHCCMDOK_01119	1.44e-140	-	-	-	S	-	-	-	Predicted membrane protein (DUF2306)
PHCCMDOK_01120	2.91e-255	yurR	1.4.5.1	-	E	ko:K00285	ko00360,map00360	ko00000,ko00001,ko01000	COG0665 Glycine D-amino acid oxidases (deaminating)
PHCCMDOK_01121	4.02e-94	-	-	-	S	-	-	-	VanZ like family
PHCCMDOK_01122	5.73e-143	wrbA	1.6.5.2	-	S	ko:K03809	ko00130,ko01110,map00130,map01110	ko00000,ko00001,ko01000	Belongs to the WrbA family
PHCCMDOK_01124	8.83e-106	-	-	-	K	-	-	-	Acetyltransferase (GNAT) family
PHCCMDOK_01125	5.94e-164	aroD	4.2.1.10	-	E	ko:K03785	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
PHCCMDOK_01126	0.0	-	-	-	V	-	-	-	SNF2 family N-terminal domain
PHCCMDOK_01129	0.0	-	-	-	S	-	-	-	LXG domain of WXG superfamily
PHCCMDOK_01130	1.43e-112	-	-	-	-	-	-	-	-
PHCCMDOK_01131	2.72e-194	-	-	-	-	-	-	-	-
PHCCMDOK_01132	0.0	-	-	-	E	-	-	-	Sodium:solute symporter family
PHCCMDOK_01133	5.45e-29	-	-	-	-	-	-	-	-
PHCCMDOK_01134	3.89e-284	bbsF_2	2.8.3.16	-	C	ko:K07749	-	ko00000,ko01000	acyl-CoA transferases carnitine dehydratase
PHCCMDOK_01135	6.35e-146	-	-	-	K	-	-	-	FCD domain
PHCCMDOK_01136	1.31e-202	-	4.1.3.4	-	E	ko:K01640	ko00072,ko00280,ko00281,ko00650,ko01100,ko04146,map00072,map00280,map00281,map00650,map01100,map04146	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA lyase
PHCCMDOK_01137	2.6e-131	ybbH	-	-	K	-	-	-	RpiR family transcriptional regulator
PHCCMDOK_01138	4.81e-228	-	-	-	EG	ko:K03299	-	ko00000,ko02000	COG2610 H gluconate symporter and related permeases
PHCCMDOK_01139	7.1e-162	garR	1.1.1.60	-	I	ko:K00042	ko00630,ko01100,map00630,map01100	ko00000,ko00001,ko01000	COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
PHCCMDOK_01140	4.97e-236	-	-	-	S	-	-	-	Putative nucleotide-binding of sugar-metabolising enzyme
PHCCMDOK_01141	1.78e-284	hmrA	-	-	S	ko:K12941,ko:K21613	-	ko00000,ko01000,ko01002	amidohydrolase
PHCCMDOK_01142	6.67e-202	metQ_3	-	-	M	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
PHCCMDOK_01143	3.91e-145	-	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG2011 ABC-type metal ion transport system, permease component
PHCCMDOK_01144	4.2e-241	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PHCCMDOK_01145	3.72e-214	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PHCCMDOK_01146	0.0	xynB	3.2.1.37	GH43	G	ko:K01198	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
PHCCMDOK_01147	0.0	aguA	3.2.1.139	-	G	ko:K01235	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 67 family
PHCCMDOK_01148	3.12e-223	-	-	-	G	ko:K17319	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_01149	2.69e-197	-	-	-	G	ko:K17320	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0395 ABC-type sugar transport system, permease component
PHCCMDOK_01150	0.0	-	-	-	G	ko:K17318	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PHCCMDOK_01151	8.36e-145	-	-	-	S	-	-	-	Protein of unknown function, DUF624
PHCCMDOK_01152	1.94e-248	gldA	1.1.1.6	-	C	ko:K00005	ko00561,ko00640,ko01100,map00561,map00640,map01100	ko00000,ko00001,ko01000	COG0371 Glycerol dehydrogenase and related enzymes
PHCCMDOK_01153	8.66e-43	-	-	-	D	-	-	-	nuclear chromosome segregation
PHCCMDOK_01155	3.27e-276	hutI	-	-	Q	-	-	-	COG1228 Imidazolonepropionase and related amidohydrolases
PHCCMDOK_01156	8.29e-252	-	-	-	Q	-	-	-	COG1228 Imidazolonepropionase and related amidohydrolases
PHCCMDOK_01157	0.0	-	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0747 ABC-type dipeptide transport system, periplasmic component
PHCCMDOK_01158	9.9e-216	-	-	-	EP	ko:K02033	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PHCCMDOK_01159	4.75e-192	-	-	-	EP	ko:K02034,ko:K13891	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PHCCMDOK_01160	3.73e-240	-	-	-	P	ko:K02031,ko:K16202	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHCCMDOK_01161	3.03e-242	-	-	-	E	ko:K02032,ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHCCMDOK_01162	7.64e-222	-	-	-	S	-	-	-	Protein of unknown function (DUF1177)
PHCCMDOK_01163	3.91e-307	yodQ	3.5.1.16, 3.5.1.18	-	E	ko:K01438,ko:K01439	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Acetylornithine deacetylase
PHCCMDOK_01164	4.63e-175	-	-	-	K	-	-	-	Transcriptional regulator
PHCCMDOK_01165	0.0	xylA	5.3.1.5	-	G	ko:K01805	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko01000	Belongs to the xylose isomerase family
PHCCMDOK_01166	0.0	xylB	2.7.1.17	-	G	ko:K00854	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	xylulose kinase
PHCCMDOK_01167	8.59e-249	mro	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Converts alpha-aldose to the beta-anomer
PHCCMDOK_01168	3.52e-274	xylR5	-	-	GK	-	-	-	ROK family
PHCCMDOK_01169	9.48e-157	-	-	-	S	ko:K09992	-	ko00000	Trehalose utilisation
PHCCMDOK_01170	1.46e-282	yrbE	-	-	S	-	-	-	Oxidoreductase family, C-terminal alpha/beta domain
PHCCMDOK_01171	0.0	-	-	-	KT	ko:K09684	-	ko00000,ko03000	PucR C-terminal helix-turn-helix domain
PHCCMDOK_01172	6e-139	-	-	-	E	-	-	-	Asp/Glu/Hydantoin racemase
PHCCMDOK_01173	0.0	-	-	-	S	-	-	-	OPT oligopeptide transporter protein
PHCCMDOK_01174	4.74e-244	-	-	-	S	ko:K09703	-	ko00000	Protein of unknown function (DUF917)
PHCCMDOK_01175	5.51e-213	-	-	-	S	-	-	-	Protein of unknown function (DUF1177)
PHCCMDOK_01176	5.63e-145	-	-	-	E	ko:K14591	-	ko00000	AroM protein
PHCCMDOK_01177	7.02e-218	-	-	-	E	-	-	-	Thermophilic metalloprotease (M29)
PHCCMDOK_01178	3.05e-249	-	-	-	EGP	-	-	-	Uncharacterised MFS-type transporter YbfB
PHCCMDOK_01179	2.4e-42	-	5.3.2.6	-	S	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Tautomerase enzyme
PHCCMDOK_01180	3.86e-262	chrA	-	-	P	ko:K07240	-	ko00000,ko02000	chromate transporter, chromate ion transporter
PHCCMDOK_01181	6.94e-59	M1-594	-	-	S	-	-	-	Thiamine-binding protein
PHCCMDOK_01182	0.0	yngI	-	-	IQ	ko:K00666	-	ko00000,ko01000,ko01004	COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
PHCCMDOK_01183	1.82e-309	-	-	-	-	-	-	-	-
PHCCMDOK_01185	2.01e-289	gntT	-	-	EG	-	-	-	gluconate transmembrane transporter activity
PHCCMDOK_01186	8.25e-182	-	2.7.1.196, 2.7.1.205	-	K	ko:K02760,ko:K20480	ko00500,ko02024,ko02060,map00500,map02024,map02060	ko00000,ko00001,ko00002,ko01000,ko02000,ko03000	sequence-specific DNA binding
PHCCMDOK_01187	2.61e-155	yflK	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_01188	2.71e-99	-	-	-	-	-	-	-	-
PHCCMDOK_01189	1.5e-09	-	-	-	S	-	-	-	Uncharacterized small protein (DUF2292)
PHCCMDOK_01190	1.52e-108	ssuE	1.5.1.38, 1.5.1.45	-	S	ko:K00299,ko:K16902	ko00380,ko00740,ko00920,ko01100,map00380,map00740,map00920,map01100	ko00000,ko00001,ko01000	FMN reductase
PHCCMDOK_01191	6.13e-213	-	-	-	P	ko:K02051,ko:K15553	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PHCCMDOK_01192	6.22e-266	ssuD	1.14.14.28, 1.14.14.5	-	C	ko:K04091,ko:K20938	ko00920,map00920	ko00000,ko00001,ko01000	Catalyzes the desulfonation of aliphatic sulfonates
PHCCMDOK_01193	1.54e-170	ssuC	-	-	P	ko:K15554	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component
PHCCMDOK_01194	3.72e-158	ssuB	-	-	P	ko:K02049,ko:K15555	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system
PHCCMDOK_01195	4.42e-118	-	-	-	K	-	-	-	Transcriptional regulator PadR-like family
PHCCMDOK_01196	1.35e-203	-	-	-	S	-	-	-	Carbohydrate esterase, sialic acid-specific acetylesterase
PHCCMDOK_01197	1.24e-178	cysH	1.8.4.10, 1.8.4.8	-	EH	ko:K00390	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the PAPS reductase family. CysH subfamily
PHCCMDOK_01198	3.39e-276	sat	2.7.7.4	-	P	ko:K00958	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the sulfate adenylyltransferase family
PHCCMDOK_01199	2.3e-235	cysP	-	-	P	ko:K16331	-	ko00000,ko02000	phosphate transporter
PHCCMDOK_01200	1.47e-144	cysC	2.7.1.25	-	P	ko:K00860	ko00230,ko00920,ko01100,ko01120,map00230,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of activated sulfate
PHCCMDOK_01201	0.0	nasF	2.1.1.107, 4.2.1.75	-	H	ko:K13542	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the precorrin methyltransferase family
PHCCMDOK_01202	7.09e-178	cbiX	4.99.1.3	-	C	ko:K03795	ko00860,ko01100,ko01120,map00860,map01100,map01120	ko00000,ko00001,ko01000	CbiX
PHCCMDOK_01203	6.72e-129	sirC	1.3.1.76, 4.99.1.4	-	H	ko:K02304	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Siroheme synthase
PHCCMDOK_01204	0.0	cysJ	1.8.1.2	-	P	ko:K00380	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
PHCCMDOK_01205	0.0	cysI	1.8.1.2, 1.8.7.1	-	P	ko:K00381,ko:K00392	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate
PHCCMDOK_01206	1.22e-20	-	-	-	-	-	-	-	-
PHCCMDOK_01207	2.12e-194	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
PHCCMDOK_01208	2.84e-77	-	-	-	K	-	-	-	GntR family transcriptional regulator
PHCCMDOK_01209	9.28e-271	yraM	-	-	S	-	-	-	PrpF protein
PHCCMDOK_01210	2.43e-84	-	-	-	S	-	-	-	Tripartite tricarboxylate transporter TctB family
PHCCMDOK_01211	0.0	-	-	-	S	-	-	-	Tripartite tricarboxylate transporter TctA family
PHCCMDOK_01212	3.74e-265	-	-	-	S	-	-	-	Tripartite tricarboxylate transporter family receptor
PHCCMDOK_01213	6.51e-214	yraN	-	-	K	-	-	-	Transcriptional regulator
PHCCMDOK_01214	1.2e-241	icd	1.1.1.41, 1.1.1.42, 1.1.1.85	-	CE	ko:K00030,ko:K00031,ko:K00052	ko00020,ko00290,ko00480,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00290,map00480,map00660,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146	br01601,ko00000,ko00001,ko00002,ko01000	Isocitrate/isopropylmalate dehydrogenase
PHCCMDOK_01215	0.0	-	-	-	C	ko:K13796	-	ko00000	COG1053 Succinate dehydrogenase fumarate reductase, flavoprotein subunit
PHCCMDOK_01216	6.97e-239	yjmD	1.1.1.380	-	E	ko:K08322	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	Alcohol dehydrogenase GroES-like domain
PHCCMDOK_01217	9.97e-271	uxuA	4.2.1.8	-	G	ko:K01686	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the dehydration of D-mannonate
PHCCMDOK_01218	1.14e-194	yjmF	-	-	IQ	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
PHCCMDOK_01219	5.98e-131	ubiX	2.5.1.129	-	H	ko:K03186	ko00130,ko00627,ko00940,ko01100,ko01110,ko01120,ko01220,map00130,map00627,map00940,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
PHCCMDOK_01220	1.38e-132	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PHCCMDOK_01221	6.31e-233	ybcL	-	-	EGP	ko:K08164	-	ko00000,ko02000	COG2814 Arabinose efflux permease
PHCCMDOK_01222	1.1e-30	-	-	-	-	-	-	-	-
PHCCMDOK_01223	6.32e-27	XK27_00085	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix domain
PHCCMDOK_01224	9.32e-289	cstA	-	-	T	-	-	-	Carbon starvation protein
PHCCMDOK_01225	2.49e-248	ycgA	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
PHCCMDOK_01226	7.11e-107	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
PHCCMDOK_01227	3.91e-162	-	3.4.17.11	-	E	ko:K01295	-	ko00000,ko01000,ko01002	Peptidase dimerisation domain
PHCCMDOK_01228	8.22e-203	-	-	-	P	-	-	-	Arsenic resistance protein
PHCCMDOK_01229	1.8e-117	-	-	-	-	-	-	-	-
PHCCMDOK_01230	2.36e-156	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form
PHCCMDOK_01231	9.97e-59	licB	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHCCMDOK_01232	4.82e-67	celC	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHCCMDOK_01233	1.87e-306	ywbA	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PHCCMDOK_01234	8.09e-315	-	3.2.1.86	GT4	G	ko:K01222	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
PHCCMDOK_01235	1.44e-169	celCD	2.7.1.196, 2.7.1.205, 3.5.1.105	-	G	ko:K02759,ko:K03478	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Probably catalyzes the deacetylation of acetylated carbohydrates an important step in the degradation of oligosaccharides
PHCCMDOK_01236	3.4e-176	ybgA	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
PHCCMDOK_01237	0.0	chiA	3.2.1.14	GH18	G	ko:K01183	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Glycoside Hydrolase Family 18
PHCCMDOK_01238	6.3e-66	yxeA	-	-	S	-	-	-	Protein of unknown function (DUF1093)
PHCCMDOK_01239	7.81e-282	ybfB	-	-	G	-	-	-	COG0477 Permeases of the major facilitator superfamily
PHCCMDOK_01240	8.43e-262	rlmN	2.1.1.192	-	J	ko:K06941	-	ko00000,ko01000,ko03009	Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PHCCMDOK_01241	5.53e-303	kynU	3.7.1.3	-	E	ko:K01556	ko00380,ko01100,map00380,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively
PHCCMDOK_01242	9.09e-149	kynB	3.5.1.9	-	S	ko:K07130	ko00380,ko00630,ko01100,map00380,map00630,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
PHCCMDOK_01243	3.68e-198	kynA	1.13.11.11	-	E	ko:K00453	ko00380,ko01100,map00380,map01100	ko00000,ko00001,ko00002,ko01000	Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety
PHCCMDOK_01244	8.29e-255	-	-	-	E	ko:K06296	-	ko00000,ko02000	Spore germination protein
PHCCMDOK_01246	6.22e-267	gerAC1	-	-	S	ko:K06297	-	ko00000	spore germination
PHCCMDOK_01247	0.0	gerKA	-	-	EG	ko:K06295	-	ko00000	Spore germination protein
PHCCMDOK_01248	2.77e-171	-	-	-	K	-	-	-	DeoR C terminal sensor domain
PHCCMDOK_01249	3.7e-297	-	2.7.1.219, 2.7.1.220	-	S	ko:K22129	-	ko00000,ko01000	Putative nucleotide-binding of sugar-metabolising enzyme
PHCCMDOK_01250	3.07e-240	pdxA	1.1.1.408, 1.1.1.409	-	H	ko:K22024	-	ko00000,ko01000	Belongs to the PdxA family
PHCCMDOK_01251	1.72e-279	gntP	-	-	EG	ko:K03299	-	ko00000,ko02000	GntP family permease
PHCCMDOK_01252	1.91e-195	araQ5	-	-	P	ko:K10190,ko:K10242	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PFAM binding-protein-dependent transport systems inner membrane component
PHCCMDOK_01253	1.2e-208	cebF	-	-	P	ko:K10189,ko:K10241,ko:K17235	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PFAM binding-protein-dependent transport systems inner membrane component
PHCCMDOK_01254	8.16e-291	lacE3	-	-	G	ko:K10240	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PFAM extracellular solute-binding protein family 1
PHCCMDOK_01257	2.25e-315	argE	-	-	E	ko:K20895	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Acetylornithine deacetylase
PHCCMDOK_01258	2.06e-159	tenA	3.5.99.2	-	K	ko:K03707	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03000	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
PHCCMDOK_01259	8.17e-244	-	-	-	G	-	-	-	Acyltransferase family
PHCCMDOK_01260	5.45e-205	-	-	-	P	-	-	-	YhfZ C-terminal domain
PHCCMDOK_01261	2.33e-74	-	-	-	S	-	-	-	PRD domain
PHCCMDOK_01262	4e-76	-	-	-	S	-	-	-	Protein of unknown function DUF2620
PHCCMDOK_01263	9.85e-283	-	-	-	S	-	-	-	Protein of unknown function
PHCCMDOK_01264	1.13e-218	php	-	-	S	ko:K07048	-	ko00000	Phosphotriesterase family
PHCCMDOK_01265	6.17e-261	-	-	-	E	-	-	-	Cys/Met metabolism PLP-dependent enzyme
PHCCMDOK_01266	5.02e-276	-	-	-	E	-	-	-	Alanine racemase, N-terminal domain
PHCCMDOK_01267	8.85e-287	-	-	-	G	-	-	-	Metalloenzyme superfamily
PHCCMDOK_01268	0.0	-	-	-	O	-	-	-	DnaJ molecular chaperone homology domain
PHCCMDOK_01269	0.0	hscC	-	-	O	ko:K04045	-	ko00000,ko03110	Hsp70 protein
PHCCMDOK_01270	1.89e-181	butA	1.1.1.304, 1.1.1.76	-	IQ	ko:K03366	ko00650,map00650	ko00000,ko00001,ko01000	Enoyl-(Acyl carrier protein) reductase
PHCCMDOK_01271	1.32e-193	ydeO	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2179)
PHCCMDOK_01272	8.33e-187	ylmA	3.6.3.34	-	P	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1119 ABC-type molybdenum transport system, ATPase component photorepair protein PhrA
PHCCMDOK_01273	5.83e-221	-	-	-	K	-	-	-	AraC-like ligand binding domain
PHCCMDOK_01274	8.31e-313	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PHCCMDOK_01275	3.52e-195	M1-465	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_01276	1.29e-202	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_01277	1.48e-64	esxA	-	-	S	-	-	-	Belongs to the WXG100 family
PHCCMDOK_01278	7.61e-52	yukD	-	-	S	-	-	-	WXG100 protein secretion system (Wss), protein YukD
PHCCMDOK_01279	4.04e-273	essB	-	-	S	-	-	-	WXG100 protein secretion system (Wss), protein YukC
PHCCMDOK_01280	0.0	essC	-	-	D	ko:K03466	-	ko00000,ko03036	COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
PHCCMDOK_01281	0.0	yueB	-	-	S	-	-	-	domain protein
PHCCMDOK_01282	2.93e-92	-	-	-	S	-	-	-	Family of unknown function (DUF5383)
PHCCMDOK_01283	1.04e-60	-	-	-	-	-	-	-	-
PHCCMDOK_01284	1.41e-64	-	-	-	-	-	-	-	-
PHCCMDOK_01285	1.43e-83	-	-	-	-	-	-	-	-
PHCCMDOK_01286	8.21e-302	-	-	-	S	-	-	-	nuclease activity
PHCCMDOK_01288	8.77e-63	-	-	-	-	-	-	-	-
PHCCMDOK_01292	6.7e-05	-	-	-	S	-	-	-	LXG domain of WXG superfamily
PHCCMDOK_01298	2.77e-66	-	-	-	-	-	-	-	-
PHCCMDOK_01300	1.46e-63	-	-	-	-	-	-	-	-
PHCCMDOK_01301	1.37e-07	-	-	-	-	-	-	-	-
PHCCMDOK_01302	7.35e-220	-	-	-	G	-	-	-	Glycoside hydrolase family 16
PHCCMDOK_01306	1.38e-165	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	COG1136 ABC-type antimicrobial peptide transport system, ATPase component
PHCCMDOK_01307	0.0	-	-	-	Q	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PHCCMDOK_01308	8.17e-114	-	-	-	K	-	-	-	Transcriptional regulator PadR-like family
PHCCMDOK_01309	8.37e-98	-	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
PHCCMDOK_01310	5.17e-180	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
PHCCMDOK_01311	7.94e-150	nanE	5.1.3.9	-	G	ko:K01788	ko00520,map00520	ko00000,ko00001,ko01000	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PHCCMDOK_01312	0.0	ptsG	2.7.1.199, 2.7.1.208	-	G	ko:K02777,ko:K02778,ko:K02779,ko:K02790,ko:K02791	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHCCMDOK_01313	9.03e-297	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
PHCCMDOK_01314	2.93e-99	scdA	-	-	D	ko:K07322	-	ko00000	Di-iron-containing protein involved in the repair of iron-sulfur clusters
PHCCMDOK_01315	0.0	narG	1.7.5.1	-	C	ko:K00370	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PHCCMDOK_01316	0.0	narH	1.7.5.1	-	C	ko:K00371	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	Nitrate reductase, beta
PHCCMDOK_01317	1.08e-147	narJ	-	-	C	ko:K00373	ko02020,map02020	ko00000,ko00001	Nitrate reductase delta subunit
PHCCMDOK_01318	3.15e-161	narI	1.7.5.1	-	C	ko:K00374	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	nitrate reductase, gamma subunit
PHCCMDOK_01319	1.19e-107	nreA	-	-	T	ko:K10851	ko02020,map02020	ko00000,ko00001	phosphoenolpyruvate-protein phosphotransferase activity
PHCCMDOK_01320	5.82e-250	nreB	2.7.13.3	-	T	ko:K07683,ko:K07777	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Member of the two-component regulatory system DegS DegU, which plays an important role in the transition growth phase
PHCCMDOK_01321	3.81e-142	nreC	-	-	T	ko:K07696	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PHCCMDOK_01322	0.0	narK	-	-	P	ko:K02575,ko:K10850	ko00910,ko02020,map00910,map02020	ko00000,ko00001,ko00002,ko02000	COG2223 Nitrate nitrite transporter
PHCCMDOK_01323	2.43e-157	-	-	-	S	-	-	-	YwiC-like protein
PHCCMDOK_01324	0.0	-	-	-	G	ko:K17318	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PHCCMDOK_01325	0.0	-	2.7.13.3	-	T	ko:K07718	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHCCMDOK_01326	1.3e-284	-	-	-	T	ko:K07720	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	cheY-homologous receiver domain
PHCCMDOK_01327	1.42e-220	-	-	-	G	ko:K17319	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_01328	7.21e-204	ytcP1	-	-	U	ko:K17320	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_01329	2.59e-51	-	-	-	-	-	-	-	-
PHCCMDOK_01330	8.18e-128	yvrI	-	-	K	ko:K03093	-	ko00000,ko03021	RNA polymerase
PHCCMDOK_01331	3.35e-140	apl	3.1.3.1	-	S	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	SNARE associated Golgi protein
PHCCMDOK_01332	0.0	melA	3.2.1.22	-	G	ko:K07406	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	Family 4 glycosyl hydrolase
PHCCMDOK_01333	1.66e-214	-	-	-	K	-	-	-	AraC-like ligand binding domain
PHCCMDOK_01334	2.36e-245	des	1.14.19.23, 1.14.19.45	-	I	ko:K10255	ko02020,map02020	ko00000,ko00001,ko01000,ko01004	fatty acid desaturase
PHCCMDOK_01335	5.9e-259	desK	2.7.13.3	-	T	ko:K07778	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHCCMDOK_01336	1.21e-137	desR	-	-	T	ko:K07693	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PHCCMDOK_01337	3.13e-282	mgtE	-	-	P	ko:K06213	-	ko00000,ko02000	Acts as a magnesium transporter
PHCCMDOK_01338	2.16e-99	-	-	-	K	ko:K15973	-	ko00000,ko03000	transcriptional
PHCCMDOK_01339	1.85e-71	-	-	-	-	-	-	-	-
PHCCMDOK_01340	4.73e-113	-	3.1.1.29	-	K	ko:K01056	-	ko00000,ko01000,ko03012	-acetyltransferase
PHCCMDOK_01341	8.87e-307	-	-	-	EK	-	-	-	Alanine-glyoxylate amino-transferase
PHCCMDOK_01342	5.3e-104	yvbK	-	-	K	-	-	-	acetyltransferase
PHCCMDOK_01343	3.43e-187	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine aminopeptidase
PHCCMDOK_01344	1.21e-104	-	-	-	S	-	-	-	COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
PHCCMDOK_01346	1.32e-254	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
PHCCMDOK_01347	2.79e-236	-	-	-	KT	ko:K02647	-	ko00000,ko03000	Sugar diacid utilization regulator
PHCCMDOK_01348	1.13e-250	yetN	-	-	S	-	-	-	Protein of unknown function (DUF3900)
PHCCMDOK_01349	4.81e-161	-	-	-	-	-	-	-	-
PHCCMDOK_01350	4.33e-146	ppiB	5.2.1.8	-	O	ko:K01802,ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PHCCMDOK_01351	1.83e-234	qor	1.1.1.1, 1.6.5.5	-	C	ko:K00001,ko:K00344	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
PHCCMDOK_01352	4.18e-196	hisJ3	3.1.3.15	-	E	ko:K04486	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	PHP domain
PHCCMDOK_01353	0.0	prtS	3.4.21.110, 3.4.21.96	-	O	ko:K01361,ko:K08652,ko:K14647	ko02024,map02024	ko00000,ko00001,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
PHCCMDOK_01354	3.7e-123	sipW	3.4.21.89	-	U	ko:K13280	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	Signal peptidase
PHCCMDOK_01355	1.76e-165	-	-	-	-	ko:K06336	-	ko00000,ko01002	-
PHCCMDOK_01356	1.19e-121	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Methyladenine glycosylase
PHCCMDOK_01357	2.62e-167	tenA	3.5.99.2	-	K	ko:K03707	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03000	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
PHCCMDOK_01358	2.45e-224	-	-	-	S	ko:K07035	-	ko00000	Phosphotransferase system, EIIC
PHCCMDOK_01359	1.97e-198	-	-	-	S	-	-	-	CAAX amino terminal protease family protein
PHCCMDOK_01360	0.0	-	3.6.3.54	-	P	ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
PHCCMDOK_01362	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter (permease)
PHCCMDOK_01363	6.34e-181	yxdL_2	-	-	V	ko:K02003,ko:K11635	ko02020,map02020	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PHCCMDOK_01364	3.86e-239	yvcQ	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
PHCCMDOK_01365	1.97e-168	yvcP	-	-	T	ko:K02483	-	ko00000,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PHCCMDOK_01366	1.37e-31	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	Capsular polysaccharide biosynthesis protein
PHCCMDOK_01367	1.07e-65	-	-	-	-	-	-	-	-
PHCCMDOK_01368	7.01e-213	gmuE	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	COG1940 Transcriptional regulator sugar kinase
PHCCMDOK_01369	0.0	rocB	-	-	E	-	-	-	arginine degradation protein
PHCCMDOK_01370	0.0	mdr	-	-	EGP	-	-	-	the major facilitator superfamily
PHCCMDOK_01372	1.16e-213	-	-	-	Q	-	-	-	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
PHCCMDOK_01373	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
PHCCMDOK_01374	8.22e-269	galK	2.7.1.6	-	G	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PHCCMDOK_01375	8.82e-164	lacR	-	-	K	ko:K02530	-	ko00000,ko03000	DeoR C terminal sensor domain
PHCCMDOK_01376	0.0	ltaS	2.7.8.20	-	M	ko:K01138,ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Belongs to the LTA synthase family
PHCCMDOK_01377	9.11e-236	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PHCCMDOK_01378	2.38e-292	-	-	-	G	-	-	-	ABC transporter substrate-binding protein
PHCCMDOK_01379	1.34e-201	-	-	-	G	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_01380	3.04e-199	-	-	-	P	ko:K02026,ko:K10190,ko:K10242	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PFAM binding-protein-dependent transport systems inner membrane component
PHCCMDOK_01381	5.96e-81	-	-	-	FJ	-	-	-	tRNA wobble adenosine to inosine editing
PHCCMDOK_01382	6.8e-18	-	-	-	S	-	-	-	Inner spore coat protein D
PHCCMDOK_01383	0.0	M1-554	-	-	G	-	-	-	Endonuclease Exonuclease Phosphatase
PHCCMDOK_01384	0.0	ade	3.5.4.2	-	F	ko:K01486	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	Adenine deaminase C-terminal domain
PHCCMDOK_01385	7.35e-249	potA11	3.6.3.30	-	P	ko:K02010,ko:K02052	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PHCCMDOK_01386	3.46e-171	potC3	-	-	P	ko:K02053	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_01387	1.26e-178	-	-	-	E	ko:K02054,ko:K11071	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	COG1176 ABC-type spermidine putrescine transport system, permease component I
PHCCMDOK_01388	3.33e-213	-	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	nucleoside hydrolase
PHCCMDOK_01389	7.08e-250	-	-	-	E	ko:K02055	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0687 Spermidine putrescine-binding periplasmic protein
PHCCMDOK_01390	1.49e-74	-	-	-	-	-	-	-	-
PHCCMDOK_01391	1.63e-63	-	-	-	-	-	-	-	-
PHCCMDOK_01393	5.72e-207	XK27_03180	-	-	T	-	-	-	Belongs to the universal stress protein A family
PHCCMDOK_01394	2.19e-180	rpl	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
PHCCMDOK_01395	4.4e-219	fruK-1	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	pfkB family carbohydrate kinase
PHCCMDOK_01396	0.0	fruC	2.7.1.202	-	G	ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
PHCCMDOK_01397	9.17e-100	fruD	2.7.1.202	-	G	ko:K02768	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PHCCMDOK_01398	1.7e-200	kbaY	4.1.2.13, 4.1.2.40	-	G	ko:K01624,ko:K08302	ko00010,ko00030,ko00051,ko00052,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00052,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway
PHCCMDOK_01399	2.46e-114	-	-	-	-	-	-	-	-
PHCCMDOK_01400	1.04e-110	ltrC	3.1.3.27	-	I	ko:K01095	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Phosphatidylglycerophosphatase A
PHCCMDOK_01402	1.26e-10	tlp	-	-	S	ko:K06434	-	ko00000	spore protein
PHCCMDOK_01403	1.1e-84	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Chalcone and stilbene synthases, N-terminal domain
PHCCMDOK_01404	1e-147	ycfA	-	-	K	-	-	-	Transcriptional regulator
PHCCMDOK_01405	2.5e-245	ybhR	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	COG0842 ABC-type multidrug transport system, permease component
PHCCMDOK_01406	7.4e-179	ybhF_2	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	COG1131 ABC-type multidrug transport system, ATPase component
PHCCMDOK_01407	6.55e-109	-	-	-	M	ko:K01993	-	ko00000	PFAM secretion protein HlyD family protein
PHCCMDOK_01409	6.12e-258	thrCA	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Pyridoxal-phosphate dependent enzyme
PHCCMDOK_01410	1.14e-185	cah	4.2.1.1	-	P	ko:K01674	ko00910,map00910	ko00000,ko00001,ko01000	Eukaryotic-type carbonic anhydrase
PHCCMDOK_01411	2.86e-304	-	-	-	KT	-	-	-	transcriptional regulatory protein
PHCCMDOK_01412	0.0	-	-	-	S	ko:K12941,ko:K21613	-	ko00000,ko01000,ko01002	amidohydrolase
PHCCMDOK_01413	0.0	-	-	-	H	ko:K12942	-	ko00000	AbgT putative transporter family
PHCCMDOK_01414	7.21e-300	-	-	-	S	ko:K12940	-	ko00000,ko01002	Peptidase dimerisation domain
PHCCMDOK_01415	4.05e-88	-	-	-	S	ko:K09957	-	ko00000	Putative glycolipid-binding
PHCCMDOK_01416	1.82e-41	-	-	-	C	-	-	-	4Fe-4S binding domain
PHCCMDOK_01417	2.71e-51	-	-	-	S	-	-	-	Protein of unknown function (DUF1450)
PHCCMDOK_01418	9.49e-143	sodA	1.15.1.1	-	P	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	ko00000,ko00001,ko01000	Iron/manganese superoxide dismutases, C-terminal domain
PHCCMDOK_01419	1.44e-146	-	-	-	K	-	-	-	Transcriptional regulator
PHCCMDOK_01420	0.0	-	-	-	S	-	-	-	Polysaccharide biosynthesis protein
PHCCMDOK_01421	2.32e-191	-	-	-	S	-	-	-	Glycosyl transferase family 2
PHCCMDOK_01422	3.77e-248	-	-	-	M	-	-	-	Glycosyl transferases group 1
PHCCMDOK_01423	6.58e-70	-	-	-	-	-	-	-	-
PHCCMDOK_01424	1.1e-298	-	-	-	M	-	-	-	-O-antigen
PHCCMDOK_01425	0.0	tuaD	1.1.1.22	-	M	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PHCCMDOK_01426	3.47e-90	-	-	-	-	-	-	-	-
PHCCMDOK_01427	6.65e-183	tuaG	-	GT2	M	ko:K16698	-	ko00000,ko01000,ko01003	Glycosyltransferase like family 2
PHCCMDOK_01428	7.05e-233	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase UDP-N-acetylglucosamine-1-phosphate transferase
PHCCMDOK_01429	1.01e-224	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PHCCMDOK_01434	2.45e-248	-	-	-	UW	ko:K21493	-	ko00000,ko01000,ko02048	nuclease activity
PHCCMDOK_01440	0.0	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PHCCMDOK_01441	6.63e-234	yccF	-	-	K	ko:K07039	-	ko00000	SEC-C motif
PHCCMDOK_01442	4.69e-51	-	-	-	S	-	-	-	Regulatory protein YrvL
PHCCMDOK_01443	0.0	yfkN	3.1.3.5, 3.1.3.6, 3.1.4.16	-	F	ko:K01081,ko:K06931,ko:K08693	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PHCCMDOK_01444	0.0	-	-	-	P	ko:K06901	-	ko00000,ko02000	secondary active sulfate transmembrane transporter activity
PHCCMDOK_01445	1.51e-132	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PHCCMDOK_01446	3.13e-62	-	-	-	-	-	-	-	-
PHCCMDOK_01447	5.26e-123	p20	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
PHCCMDOK_01448	9.34e-162	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
PHCCMDOK_01449	1.93e-189	adcA	-	-	P	ko:K09815,ko:K09818	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
PHCCMDOK_01450	1.08e-83	yxjI	-	-	S	-	-	-	LURP-one-related
PHCCMDOK_01451	1.26e-184	gspA	-	-	M	-	-	-	Glycosyl transferase family 8
PHCCMDOK_01452	6.9e-240	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 type transporter
PHCCMDOK_01453	6.72e-271	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PHCCMDOK_01454	6.26e-218	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	COG1131 ABC-type multidrug transport system, ATPase component
PHCCMDOK_01455	2.39e-138	-	-	-	KT	-	-	-	LuxR family transcriptional regulator
PHCCMDOK_01456	4.16e-245	-	-	-	T	-	-	-	Signal transduction histidine kinase
PHCCMDOK_01457	2.7e-118	-	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Phosphoglycerate mutase family
PHCCMDOK_01458	5.45e-146	-	-	-	S	-	-	-	AAA domain
PHCCMDOK_01459	3.27e-167	-	-	-	L	-	-	-	DNA alkylation repair enzyme
PHCCMDOK_01460	5.91e-297	serS3	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PHCCMDOK_01461	7.2e-76	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PHCCMDOK_01462	3.41e-78	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PHCCMDOK_01463	4.23e-76	ydzF	-	-	K	-	-	-	HxlR-like helix-turn-helix
PHCCMDOK_01464	2.88e-220	-	3.5.3.1	-	E	ko:K01476	ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146	ko00000,ko00001,ko00002,ko01000	Arginase family
PHCCMDOK_01465	2.08e-146	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PHCCMDOK_01466	1.11e-173	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
PHCCMDOK_01467	7.89e-142	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 type transporter
PHCCMDOK_01468	1.87e-87	-	-	-	EGP	-	-	-	Transmembrane secretion effector
PHCCMDOK_01469	8.55e-135	-	-	-	K	-	-	-	TetR family transcriptional regulator
PHCCMDOK_01470	8.12e-173	-	3.1.1.5	-	I	ko:K01048	ko00564,map00564	ko00000,ko00001,ko01000	Alpha beta hydrolase
PHCCMDOK_01471	5.03e-122	-	-	-	K	-	-	-	Winged helix DNA-binding domain
PHCCMDOK_01472	8.46e-65	scrR	-	-	K	ko:K02529,ko:K03484	-	ko00000,ko03000	Transcriptional regulator, LacI family
PHCCMDOK_01473	5.33e-236	scrB	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
PHCCMDOK_01474	8.96e-228	scrA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHCCMDOK_01475	8.89e-88	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
PHCCMDOK_01476	1.28e-165	-	4.1.2.14	-	S	ko:K17463	ko00030,ko01100,ko01120,map00030,map01100,map01120	ko00000,ko00001,ko00002,ko01000	KDGP aldolase
PHCCMDOK_01477	3.14e-255	selA	2.9.1.1	-	E	ko:K01042	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko01000	L-seryl-tRNA selenium transferase
PHCCMDOK_01478	8.24e-146	-	-	-	S	-	-	-	Domain of unknown function (DUF4310)
PHCCMDOK_01479	2.68e-178	-	-	-	S	-	-	-	Domain of unknown function (DUF4311)
PHCCMDOK_01480	2.49e-77	-	-	-	S	-	-	-	Domain of unknown function (DUF4312)
PHCCMDOK_01481	1.55e-78	-	-	-	S	-	-	-	Glycine-rich SFCGS
PHCCMDOK_01482	4.99e-63	-	-	-	S	-	-	-	PRD domain
PHCCMDOK_01483	7.56e-267	-	3.5.2.3	-	S	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	amidohydrolase
PHCCMDOK_01484	0.0	-	-	-	K	-	-	-	Mga helix-turn-helix domain
PHCCMDOK_01485	0.0	-	-	-	G	-	-	-	alpha-L-rhamnosidase
PHCCMDOK_01486	0.0	lacZ	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	beta-galactosidase
PHCCMDOK_01487	6.65e-203	-	-	-	K	-	-	-	AraC-like ligand binding domain
PHCCMDOK_01488	6.14e-185	cypA	-	-	Q	-	-	-	Cytochrome P450
PHCCMDOK_01489	8.96e-171	-	-	-	EGP	ko:K08167	-	ko00000,ko00002,ko01504,ko02000	PFAM major facilitator superfamily MFS_1
PHCCMDOK_01490	3e-74	yvaF	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PHCCMDOK_01491	4.41e-23	-	2.3.1.60	-	K	ko:K03395	-	br01600,ko00000,ko01000,ko01504	Acetyltransferase (GNAT) domain
PHCCMDOK_01492	2.05e-159	-	-	-	S	-	-	-	Nucleotidyltransferase domain
PHCCMDOK_01493	2.05e-167	-	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
PHCCMDOK_01494	9.9e-57	-	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PHCCMDOK_01495	8.64e-310	pbpE	-	-	V	-	-	-	Beta-lactamase
PHCCMDOK_01496	1.3e-155	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PHCCMDOK_01497	7.14e-111	-	-	-	F	-	-	-	uridine kinase
PHCCMDOK_01498	6.89e-42	-	-	-	E	-	-	-	lactoylglutathione lyase activity
PHCCMDOK_01499	1.21e-135	yueD	1.1.1.320	-	IQ	ko:K16216	-	ko00000,ko01000	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PHCCMDOK_01500	1.3e-79	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PHCCMDOK_01501	9.22e-45	-	-	-	M	-	-	-	Host cell surface-exposed lipoprotein
PHCCMDOK_01502	1.88e-249	ybcL	-	-	EGP	ko:K08164	-	ko00000,ko02000	COG2814 Arabinose efflux permease
PHCCMDOK_01503	1.18e-61	-	-	-	K	-	-	-	ArsR family transcriptional regulator
PHCCMDOK_01504	4.98e-10	-	-	-	S	-	-	-	Protein of unknown function (DUF3533)
PHCCMDOK_01506	0.0	yobO	-	-	M	-	-	-	Pectate lyase superfamily protein
PHCCMDOK_01519	4.79e-95	ctsR	-	-	K	ko:K03708	-	ko00000,ko03000	Belongs to the CtsR family
PHCCMDOK_01520	1.2e-121	mcsA	-	-	S	ko:K19411	-	ko00000	protein with conserved CXXC pairs
PHCCMDOK_01521	1.88e-250	mcsB	2.7.14.1	-	E	ko:K19405	-	ko00000,ko01000	Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity
PHCCMDOK_01522	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Belongs to the ClpA ClpB family
PHCCMDOK_01523	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PHCCMDOK_01524	4.09e-249	disA	2.7.7.85	-	L	ko:K07067	-	ko00000,ko01000	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
PHCCMDOK_01525	5.61e-252	yacL	-	-	S	-	-	-	COG4956 Integral membrane protein (PIN domain superfamily)
PHCCMDOK_01526	1.13e-150	ispD	2.7.7.60	-	I	ko:K00991	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
PHCCMDOK_01527	1.49e-107	ispF	2.7.7.60, 4.6.1.12	-	I	ko:K01770,ko:K12506	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
PHCCMDOK_01528	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PHCCMDOK_01529	1.98e-156	cysE	2.3.1.30	-	E	ko:K00640	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	ko00000,ko00001,ko00002,ko01000	Serine acetyltransferase
PHCCMDOK_01530	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
PHCCMDOK_01531	8.52e-91	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PHCCMDOK_01532	3.82e-184	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PHCCMDOK_01533	5.28e-111	yacP	-	-	S	ko:K06962	-	ko00000	RNA-binding protein containing a PIN domain
PHCCMDOK_01534	9.77e-152	comX	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	Belongs to the sigma-70 factor family
PHCCMDOK_01535	2.37e-34	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PHCCMDOK_01536	1.83e-124	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
PHCCMDOK_01537	1.19e-93	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PHCCMDOK_01538	4.64e-160	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PHCCMDOK_01539	8.48e-106	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PHCCMDOK_01540	1.27e-69	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PHCCMDOK_01541	2.91e-148	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
PHCCMDOK_01542	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PHCCMDOK_01543	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PHCCMDOK_01544	3.72e-47	rplGB	-	-	J	ko:K07590	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the eukaryotic ribosomal protein eL8 family
PHCCMDOK_01545	4.33e-95	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PHCCMDOK_01546	1.19e-107	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PHCCMDOK_01547	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PHCCMDOK_01548	6.72e-286	tuf	-	-	J	ko:K02358	-	ko00000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PHCCMDOK_01549	2.58e-65	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
PHCCMDOK_01550	9.49e-143	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PHCCMDOK_01551	2.22e-137	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
PHCCMDOK_01552	1.38e-59	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PHCCMDOK_01553	5.09e-200	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PHCCMDOK_01554	1.53e-61	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PHCCMDOK_01555	8.5e-72	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PHCCMDOK_01556	1.76e-154	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PHCCMDOK_01557	3.79e-101	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PHCCMDOK_01558	5.12e-38	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
PHCCMDOK_01559	2.17e-52	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PHCCMDOK_01560	3.62e-79	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PHCCMDOK_01561	7.7e-67	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PHCCMDOK_01562	2.21e-121	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PHCCMDOK_01563	1.54e-87	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PHCCMDOK_01564	1.83e-124	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PHCCMDOK_01565	8.96e-79	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PHCCMDOK_01566	1.59e-110	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PHCCMDOK_01567	7.06e-36	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
PHCCMDOK_01568	9.26e-98	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	binds to the 23S rRNA
PHCCMDOK_01569	1.39e-296	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PHCCMDOK_01570	7.76e-152	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PHCCMDOK_01571	1.1e-180	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine aminopeptidase
PHCCMDOK_01572	4.15e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PHCCMDOK_01573	5.99e-20	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
PHCCMDOK_01574	8.92e-75	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PHCCMDOK_01575	4.05e-85	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PHCCMDOK_01576	4.06e-216	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PHCCMDOK_01577	1.49e-77	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
PHCCMDOK_01578	1.57e-201	cbiO	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PHCCMDOK_01579	3.48e-185	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PHCCMDOK_01580	1.77e-169	ecfT	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PHCCMDOK_01581	6.89e-186	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PHCCMDOK_01582	2.77e-103	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PHCCMDOK_01583	4.45e-86	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
PHCCMDOK_01584	1.54e-106	-	-	-	S	-	-	-	Protein of unknown function (DUF2975)
PHCCMDOK_01585	1.26e-40	yozG	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
PHCCMDOK_01587	1.05e-90	ykkB	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PHCCMDOK_01588	4.26e-104	ybaK	-	-	S	-	-	-	Protein of unknown function (DUF2521)
PHCCMDOK_01589	3.02e-171	cwlD	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	n-acetylmuramoyl-L-alanine amidase
PHCCMDOK_01590	8.39e-196	glcT	-	-	K	ko:K03480,ko:K03488	-	ko00000,ko03000	antiterminator
PHCCMDOK_01591	0.0	ptsG	2.7.1.199	-	G	ko:K02763,ko:K02764,ko:K02765,ko:K20116,ko:K20117,ko:K20118	ko00010,ko00520,ko02060,map00010,map00520,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHCCMDOK_01592	2.18e-245	mrp	-	-	D	ko:K03593	-	ko00000,ko03029,ko03036	Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
PHCCMDOK_01593	2.62e-210	-	-	-	C	-	-	-	Catalyzes the reduction of the double bond of an array of alpha,beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes
PHCCMDOK_01594	4.55e-31	-	-	-	K	-	-	-	MarR family transcriptional regulator
PHCCMDOK_01595	2.04e-28	lacF	2.7.1.196, 2.7.1.205, 2.7.1.207	-	G	ko:K02759,ko:K02786	ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHCCMDOK_01596	1.34e-95	nanE	5.1.3.9	-	G	ko:K01788	ko00520,map00520	ko00000,ko00001,ko01000	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PHCCMDOK_01597	1.67e-40	-	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PFAM Phosphotransferase system, lactose cellobiose-specific IIB subunit
PHCCMDOK_01598	8.66e-223	-	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PHCCMDOK_01599	3.88e-91	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PHCCMDOK_01600	4.89e-212	-	-	-	S	-	-	-	Protein of unknown function (DUF4127)
PHCCMDOK_01601	3.18e-119	-	-	-	K	-	-	-	transcriptional regulator, RpiR family
PHCCMDOK_01602	6.68e-96	gerD	-	-	S	ko:K06294	-	ko00000	Spore gernimation protein
PHCCMDOK_01603	8e-130	kbaA	-	-	S	ko:K06349	-	ko00000	Involved in the activation of the KinB signaling pathway of sporulation
PHCCMDOK_01604	8.38e-183	pdaB	-	-	G	-	-	-	Polysaccharide deacetylase
PHCCMDOK_01605	5.74e-46	-	-	-	-	-	-	-	-
PHCCMDOK_01606	2.95e-248	dctP	-	-	C	-	-	-	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PHCCMDOK_01607	0.0	-	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase
PHCCMDOK_01608	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	Belongs to the ClpA ClpB family
PHCCMDOK_01609	1.15e-108	-	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	COG3103 SH3 domain protein
PHCCMDOK_01610	2.17e-62	-	-	-	-	-	-	-	-
PHCCMDOK_01611	0.0	-	-	-	K	-	-	-	Mga helix-turn-helix domain
PHCCMDOK_01612	3.02e-06	sda	-	-	S	ko:K06371	-	ko00000	sporulation
PHCCMDOK_01614	7.19e-83	yqiX	-	-	S	-	-	-	YolD-like protein
PHCCMDOK_01615	6.15e-280	-	-	-	P	ko:K07148	-	ko00000	Protein of unknown function (DUF418)
PHCCMDOK_01616	6.84e-277	-	-	-	GK	-	-	-	ROK family
PHCCMDOK_01617	2.1e-307	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PHCCMDOK_01618	2.45e-217	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_01619	9.08e-189	-	-	-	G	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_01620	2.41e-236	-	-	-	S	-	-	-	Oxidoreductase family, C-terminal alpha/beta domain
PHCCMDOK_01621	1.7e-234	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PHCCMDOK_01622	3.51e-188	-	5.1.3.22	-	G	ko:K03079	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Xylose isomerase-like TIM barrel
PHCCMDOK_01623	1.18e-223	-	3.8.1.3	-	S	ko:K01561	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Alpha/beta hydrolase family
PHCCMDOK_01624	4.62e-189	gltR3	-	-	K	-	-	-	LysR substrate binding domain
PHCCMDOK_01625	1.96e-158	yxjF	1.1.1.30	-	IQ	ko:K00019	ko00072,ko00650,ko01100,map00072,map00650,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetoacetate from 3-hydroxybutyrate
PHCCMDOK_01626	1.13e-277	-	-	-	EGP	-	-	-	COG0477 Permeases of the major facilitator superfamily
PHCCMDOK_01627	0.0	-	-	-	EGP	ko:K18926	-	ko00000,ko00002,ko02000	the major facilitator superfamily
PHCCMDOK_01628	2.94e-142	-	-	-	K	-	-	-	Bacterial transcriptional repressor C-terminal
PHCCMDOK_01629	2.09e-171	-	-	-	S	-	-	-	Methyltransferase domain
PHCCMDOK_01630	7.74e-280	adhB	1.1.1.1, 1.1.1.284	-	E	ko:K00121	ko00010,ko00071,ko00350,ko00625,ko00626,ko00680,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko05204,map00010,map00071,map00350,map00625,map00626,map00680,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01200,map01220,map05204	ko00000,ko00001,ko01000	COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases
PHCCMDOK_01631	3.73e-213	fhuD11	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
PHCCMDOK_01632	1.36e-220	fhuG7	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PHCCMDOK_01633	1.7e-70	isdG	1.14.99.48	-	C	ko:K07145	ko00860,ko01110,map00860,map01110	ko00000,ko00001,ko01000	Allows bacterial pathogens to use the host heme as an iron source. Catalyzes the oxidative degradation of the heme macrocyclic porphyrin ring to the biliverdin in the presence of a suitable electron donor such as ascorbate or NADPH--cytochrome P450 reductase, with subsequent release of free iron
PHCCMDOK_01634	1.25e-143	isdC	-	-	M	-	-	-	NEAr Transporter domain
PHCCMDOK_01635	0.0	-	-	-	M	-	-	-	Cell surface protein
PHCCMDOK_01636	3.8e-199	isdE	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PHCCMDOK_01637	2.91e-211	fhuB11	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PHCCMDOK_01638	4.56e-168	fepC	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PHCCMDOK_01639	8.64e-177	srtB	3.4.22.70	-	S	ko:K08600	-	ko00000,ko01000,ko01002,ko01011	Sortase family
PHCCMDOK_01640	1.77e-302	-	-	-	S	-	-	-	COG1253 Hemolysins and related proteins containing CBS domains
PHCCMDOK_01641	3.19e-203	-	-	-	E	ko:K02002	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Glycine betaine ABC transporter
PHCCMDOK_01642	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2254)
PHCCMDOK_01643	9.69e-222	-	-	-	P	ko:K07217	-	ko00000	Catalase
PHCCMDOK_01644	3.35e-214	yflN	-	-	S	-	-	-	COG0491 Zn-dependent hydrolases, including glyoxylases
PHCCMDOK_01645	2.71e-281	fdh	1.1.1.1, 1.1.1.284	-	E	ko:K00121	ko00010,ko00071,ko00350,ko00625,ko00626,ko00680,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko05204,map00010,map00071,map00350,map00625,map00626,map00680,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01200,map01220,map05204	ko00000,ko00001,ko01000	COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases
PHCCMDOK_01646	2.54e-10	-	-	-	-	-	-	-	-
PHCCMDOK_01647	3.42e-181	hemD	4.2.1.75	-	H	ko:K01719	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Uroporphyrinogen-III synthase
PHCCMDOK_01648	1.2e-140	-	-	-	Q	-	-	-	Methyltransferase domain
PHCCMDOK_01649	2.55e-79	-	-	-	K	-	-	-	helix_turn_helix gluconate operon transcriptional repressor
PHCCMDOK_01650	5.11e-208	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PHCCMDOK_01651	4.96e-159	-	-	-	-	-	-	-	-
PHCCMDOK_01652	6.56e-194	yerO	-	-	K	-	-	-	Transcriptional regulator
PHCCMDOK_01654	0.0	swrC	-	-	V	ko:K03296	-	ko00000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PHCCMDOK_01655	3.08e-39	-	-	-	S	ko:K06418,ko:K06419	-	ko00000	spore protein
PHCCMDOK_01656	1.03e-37	-	-	-	S	-	-	-	spore protein
PHCCMDOK_01657	1.33e-156	-	-	-	S	-	-	-	membrane
PHCCMDOK_01658	6.99e-112	ypmQ	-	-	S	ko:K07152	-	ko00000,ko03029	protein SCO1 SenC PrrC, involved in biogenesis of respiratory and photosynthetic systems
PHCCMDOK_01659	6.19e-208	ytlI3	-	-	K	ko:K21960	-	ko00000,ko03000	LysR substrate binding domain
PHCCMDOK_01660	5.36e-114	ssuE	1.5.1.38	-	S	ko:K00299	ko00740,ko00920,ko01100,map00740,map00920,map01100	ko00000,ko00001,ko01000	FMN reductase
PHCCMDOK_01661	2.78e-53	yxeK	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PHCCMDOK_01662	1.69e-207	yxeK	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PHCCMDOK_01663	9.85e-72	-	-	-	S	-	-	-	Dinitrogenase iron-molybdenum cofactor
PHCCMDOK_01664	2.46e-172	ssuB	-	-	P	ko:K02049,ko:K15555	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system
PHCCMDOK_01665	1.07e-248	-	1.14.14.28, 1.14.14.5	-	C	ko:K04091,ko:K20938	ko00920,map00920	ko00000,ko00001,ko01000	Catalyzes the desulfonation of aliphatic sulfonates
PHCCMDOK_01666	5.33e-217	-	-	-	P	ko:K02051,ko:K15553	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PHCCMDOK_01667	2.57e-174	ssuC	-	-	P	ko:K15554	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component
PHCCMDOK_01668	2.56e-276	-	-	-	C	ko:K11472	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001	FAD binding domain
PHCCMDOK_01669	0.0	glcF	-	-	C	ko:K11473	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001	Glycolate oxidase
PHCCMDOK_01670	0.0	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
PHCCMDOK_01671	0.0	glcB	2.3.3.9	-	C	ko:K01638	ko00620,ko00630,ko01100,ko01110,ko01120,ko01200,map00620,map00630,map01100,map01110,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
PHCCMDOK_01672	1.18e-178	-	-	-	Q	-	-	-	Domain of unknown function (DUF2437)
PHCCMDOK_01673	1.97e-174	-	-	-	K	-	-	-	helix_turn_helix isocitrate lyase regulation
PHCCMDOK_01674	3.65e-63	-	-	-	-	-	-	-	-
PHCCMDOK_01675	2.59e-119	-	-	-	FG	-	-	-	Domain of unknown function (DUF4269)
PHCCMDOK_01677	1.48e-271	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PHCCMDOK_01679	3.58e-282	yuxJ	-	-	EGP	-	-	-	Major facilitator superfamily
PHCCMDOK_01680	8.11e-145	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PHCCMDOK_01682	1.62e-148	yneB	-	-	L	-	-	-	resolvase
PHCCMDOK_01683	2.51e-46	ynzC	-	-	S	-	-	-	UPF0291 protein
PHCCMDOK_01684	0.0	tkt	2.2.1.1	-	G	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PHCCMDOK_01685	5.21e-93	yneE	-	-	S	-	-	-	Sporulation inhibitor of replication protein sirA
PHCCMDOK_01686	8.21e-39	yneF	-	-	S	ko:K09976	-	ko00000	UPF0154 protein
PHCCMDOK_01687	0.0	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
PHCCMDOK_01688	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
PHCCMDOK_01689	2.41e-106	yneK	-	-	S	-	-	-	Protein of unknown function (DUF2621)
PHCCMDOK_01690	1.22e-19	-	-	-	-	-	-	-	-
PHCCMDOK_01692	0.0	citB	4.2.1.3	-	C	ko:K01681	ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
PHCCMDOK_01694	2.3e-06	-	-	-	S	-	-	-	Fur-regulated basic protein B
PHCCMDOK_01695	3.93e-17	sspN	-	-	S	ko:K06431	-	ko00000	Small acid-soluble spore protein N family
PHCCMDOK_01696	1.95e-175	-	-	-	P	ko:K07245	-	ko00000,ko02000	Copper resistance protein D
PHCCMDOK_01697	0.0	spoVK_1	-	-	O	-	-	-	stage V sporulation protein K
PHCCMDOK_01698	2.92e-98	yneP	-	-	S	ko:K07107	-	ko00000,ko01000	thioesterase
PHCCMDOK_01699	1.14e-194	nadE	6.3.1.5	-	H	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PHCCMDOK_01700	4.8e-104	-	-	-	S	-	-	-	Domain of unknown function (DUF4352)
PHCCMDOK_01701	5.83e-230	metAA	2.3.1.46	-	E	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PHCCMDOK_01702	9.32e-189	-	-	-	I	-	-	-	Hydrolase
PHCCMDOK_01703	3.74e-303	ykuI	-	-	T	-	-	-	Diguanylate phosphodiesterase
PHCCMDOK_01704	7.35e-31	-	-	-	-	-	-	-	-
PHCCMDOK_01705	2.41e-42	-	-	-	S	-	-	-	YppG-like protein
PHCCMDOK_01706	3.03e-91	hspX	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
PHCCMDOK_01707	7.88e-215	-	3.4.13.19	-	E	ko:K01273	-	ko00000,ko00537,ko01000,ko01002,ko04147	COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog
PHCCMDOK_01708	4.7e-202	cheV	-	-	T	ko:K03408,ko:K03415	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko02022,ko02035	Chemotaxis protein CheV
PHCCMDOK_01710	7.87e-66	yneR	-	-	S	-	-	-	Belongs to the HesB IscA family
PHCCMDOK_01711	6.64e-114	msrA	1.8.4.11	-	O	ko:K07304	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PHCCMDOK_01712	8.19e-267	-	-	-	I	ko:K01066	-	ko00000,ko01000	COG0657 Esterase lipase
PHCCMDOK_01713	1.13e-57	-	-	-	S	-	-	-	DNA alkylation repair protein
PHCCMDOK_01714	7.16e-236	qoxA	1.10.3.12	-	C	ko:K02826	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I
PHCCMDOK_01715	0.0	qoxB	1.10.3.12	-	C	ko:K02827	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
PHCCMDOK_01716	2.33e-142	qoxC	1.10.3.12	-	C	ko:K02828	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	quinol oxidase, subunit
PHCCMDOK_01717	2.19e-67	qoxD	1.10.3.12	-	C	ko:K02829	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	quinol oxidase, subunit
PHCCMDOK_01718	4.7e-57	ywcE	-	-	S	-	-	-	Required for proper spore morphogenesis. Important for spore germination
PHCCMDOK_01719	4.11e-52	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
PHCCMDOK_01720	2.92e-312	agcS	-	-	E	ko:K03310	-	ko00000	Sodium alanine symporter
PHCCMDOK_01721	1.69e-297	pepS	-	-	E	ko:K19689	-	ko00000,ko01000,ko01002	COG2309 Leucyl aminopeptidase (aminopeptidase T)
PHCCMDOK_01722	5.27e-161	queC	6.3.4.20	-	F	ko:K06920	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
PHCCMDOK_01723	7.73e-99	queD	4.1.2.50, 4.2.3.12	-	H	ko:K01737	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000,ko03016	synthase
PHCCMDOK_01724	6.34e-154	queE	4.3.99.3	-	H	ko:K10026	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
PHCCMDOK_01725	9.26e-123	queF	1.7.1.13	-	S	ko:K09457	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
PHCCMDOK_01726	3.83e-132	-	-	-	KT	ko:K02479	-	ko00000,ko02022	LuxR family transcriptional regulator
PHCCMDOK_01727	1.23e-237	-	-	-	T	-	-	-	Histidine kinase
PHCCMDOK_01728	3.2e-145	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 type transporter
PHCCMDOK_01729	5.97e-158	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 type transporter
PHCCMDOK_01730	3.78e-213	sagG	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	COG1131 ABC-type multidrug transport system, ATPase component
PHCCMDOK_01732	0.0	-	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PHCCMDOK_01733	2.17e-97	ymaD	-	-	O	-	-	-	redox protein, regulator of disulfide bond formation
PHCCMDOK_01735	1.24e-186	ykrA	-	-	S	-	-	-	hydrolases of the HAD superfamily
PHCCMDOK_01736	3.94e-41	-	-	-	-	-	-	-	-
PHCCMDOK_01737	6.7e-62	csoR	-	-	S	ko:K21600	-	ko00000,ko03000	transcriptional
PHCCMDOK_01738	1.35e-38	copZ	-	-	P	ko:K07213	ko04978,map04978	ko00000,ko00001	Heavy-metal-associated domain
PHCCMDOK_01739	4.66e-128	-	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
PHCCMDOK_01741	1e-123	-	-	-	L	ko:K04763	-	ko00000,ko03036	Belongs to the 'phage' integrase family
PHCCMDOK_01750	1.06e-43	-	-	-	-	-	-	-	-
PHCCMDOK_01751	5.57e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2493)
PHCCMDOK_01753	1.39e-34	-	-	-	-	-	-	-	-
PHCCMDOK_01757	1.15e-72	-	-	-	L	ko:K02315	-	ko00000,ko03032	DNA-dependent DNA replication
PHCCMDOK_01759	8.46e-157	-	-	-	L	-	-	-	DnaB-like helicase C terminal domain
PHCCMDOK_01760	2.25e-62	-	-	-	L	-	-	-	Toprim-like
PHCCMDOK_01761	6.4e-46	-	-	-	-	-	-	-	-
PHCCMDOK_01766	1.38e-58	-	-	-	-	-	-	-	-
PHCCMDOK_01769	3.36e-143	-	-	-	L	-	-	-	3'-5' exonuclease
PHCCMDOK_01770	8.55e-19	-	-	-	V	-	-	-	NUMOD4 motif
PHCCMDOK_01771	3.34e-73	-	-	-	L	-	-	-	DNA polymerase A domain
PHCCMDOK_01772	3.59e-161	-	-	-	-	-	-	-	-
PHCCMDOK_01773	2.13e-42	-	3.1.22.4	-	S	ko:K01159	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Crossover junction endodeoxyribonuclease RuvC
PHCCMDOK_01777	6.89e-32	nrdI	-	-	F	ko:K03647	-	ko00000	Probably involved in ribonucleotide reductase function
PHCCMDOK_01778	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PHCCMDOK_01779	6.07e-173	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PHCCMDOK_01782	5.14e-52	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	deoxyuridine 5'-triphosphate nucleotidohydrolase
PHCCMDOK_01784	4.82e-127	-	2.1.1.148	-	F	ko:K03465	ko00240,ko00670,ko01100,map00240,map00670,map01100	ko00000,ko00001,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant
PHCCMDOK_01785	1.62e-37	-	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_01786	2.82e-05	-	-	-	-	-	-	-	-
PHCCMDOK_01787	1.98e-52	-	-	-	H	-	-	-	dephospho-CoA kinase activity
PHCCMDOK_01789	8.9e-194	-	-	-	L	-	-	-	the current gene model (or a revised gene model) may contain a
PHCCMDOK_01790	1.19e-26	-	-	-	K	-	-	-	Sigma-70, region 4
PHCCMDOK_01791	2.8e-43	-	-	-	-	-	-	-	-
PHCCMDOK_01794	0.000744	-	-	-	-	-	-	-	-
PHCCMDOK_01804	1.51e-49	-	-	-	S	-	-	-	Helix-turn-helix of insertion element transposase
PHCCMDOK_01806	8.79e-316	-	-	-	S	-	-	-	TIGRFAM Phage
PHCCMDOK_01807	6.96e-241	-	-	-	S	-	-	-	Phage portal protein, SPP1 Gp6-like
PHCCMDOK_01808	1.98e-52	-	-	-	-	-	-	-	-
PHCCMDOK_01809	9.77e-201	-	-	-	S	-	-	-	Family of unknown function (DUF5309)
PHCCMDOK_01810	5.72e-11	-	-	-	S	-	-	-	prophage protein Bartonella henselae str. Houston-1 gi 49237922 emb CAF27125.1
PHCCMDOK_01817	2.48e-80	-	-	-	S	-	-	-	Phage tail tube protein
PHCCMDOK_01818	7e-18	-	-	-	N	-	-	-	Bacterial Ig-like domain 2
PHCCMDOK_01819	1.88e-51	-	-	-	S	-	-	-	Phage tail assembly chaperone protein, TAC
PHCCMDOK_01820	6.95e-51	-	-	-	S	-	-	-	Phage-related minor tail protein
PHCCMDOK_01822	2.52e-37	-	-	-	S	-	-	-	Phage-related minor tail protein
PHCCMDOK_01824	1.43e-11	xepA	-	-	-	-	-	-	-
PHCCMDOK_01826	1.06e-51	-	-	-	-	-	-	-	-
PHCCMDOK_01834	5.59e-128	sigW	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PHCCMDOK_01835	2.31e-155	rsiW	-	-	K	-	-	-	Is the anti-sigma factor for SigW. The presence of RsiW leads to the inactivation of SigW, and its proteolytic destruction to sigma-W activation
PHCCMDOK_01836	3.79e-185	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PHCCMDOK_01837	4.66e-278	ybbR	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_01838	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PHCCMDOK_01840	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PHCCMDOK_01841	1.99e-196	ybfI	-	-	K	-	-	-	AraC-like ligand binding domain
PHCCMDOK_01842	8.61e-223	-	-	-	E	ko:K00318	ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130	ko00000,ko00001,ko01000	Proline dehydrogenase
PHCCMDOK_01843	3.94e-250	-	-	-	V	-	-	-	Beta-lactamase
PHCCMDOK_01844	2.42e-40	-	-	-	S	-	-	-	Aminoglycoside phosphotransferase
PHCCMDOK_01845	4.39e-219	-	-	-	S	-	-	-	Aminoglycoside phosphotransferase
PHCCMDOK_01846	1.43e-96	-	-	-	K	-	-	-	SpoVT / AbrB like domain
PHCCMDOK_01847	7.47e-280	yjiC	-	-	CG	-	-	-	COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase
PHCCMDOK_01848	9e-181	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PHCCMDOK_01849	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PHCCMDOK_01850	5.03e-156	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
PHCCMDOK_01851	1.07e-238	-	-	-	T	-	-	-	Histidine kinase-like ATPases
PHCCMDOK_01852	4.26e-139	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PHCCMDOK_01853	1.65e-286	-	-	-	EGP	-	-	-	Transmembrane secretion effector
PHCCMDOK_01854	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PHCCMDOK_01855	8.89e-170	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
PHCCMDOK_01856	3.47e-73	ytrA	-	-	K	ko:K07979	-	ko00000,ko03000	GntR family transcriptional regulator
PHCCMDOK_01857	3.17e-200	CcmA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PHCCMDOK_01858	9.2e-118	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PHCCMDOK_01859	2.29e-224	-	6.1.1.17	-	J	ko:K01885	ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PHCCMDOK_01860	7.93e-196	penP	3.5.2.6	-	V	ko:K17836,ko:K18766	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	beta-lactamase
PHCCMDOK_01861	0.0	mecR1	-	-	KTV	ko:K02172,ko:K02547	ko01501,map01501	ko00000,ko00001,ko00002,ko01002,ko01504	BlaR1 peptidase M56
PHCCMDOK_01862	2.61e-83	blaI	-	-	K	ko:K02171,ko:K02546	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Penicillinase repressor
PHCCMDOK_01863	1.01e-180	-	-	-	H	ko:K17882	-	ko00000,ko01000,ko01504	KNTase C-terminal domain
PHCCMDOK_01864	9.1e-83	-	-	-	K	ko:K21903	-	ko00000,ko03000	transcriptional
PHCCMDOK_01865	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	COG2217 Cation transport ATPase
PHCCMDOK_01866	3.92e-246	trkA	-	-	P	ko:K07222	-	ko00000	Oxidoreductase
PHCCMDOK_01867	6.38e-108	-	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
PHCCMDOK_01868	1.1e-103	-	-	-	-	-	-	-	-
PHCCMDOK_01869	5.94e-175	-	-	-	Q	-	-	-	ubiE/COQ5 methyltransferase family
PHCCMDOK_01870	8.67e-230	-	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
PHCCMDOK_01871	4.76e-146	-	-	-	Q	-	-	-	SAM-dependent methyltransferase
PHCCMDOK_01872	2.15e-180	-	-	-	EG	-	-	-	EamA-like transporter family
PHCCMDOK_01873	8.11e-167	-	-	-	K	ko:K18907	-	ko00000,ko00002,ko01504,ko03000	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PHCCMDOK_01874	3.88e-136	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PHCCMDOK_01875	5.53e-84	-	-	-	-	-	-	-	-
PHCCMDOK_01876	1.12e-89	-	-	-	S	-	-	-	Protein of unknown function (DUF2512)
PHCCMDOK_01877	4.73e-146	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
PHCCMDOK_01878	3.68e-107	-	2.3.1.128	-	J	ko:K03789,ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
PHCCMDOK_01879	0.0	siaT_4	-	-	S	-	-	-	Tripartite ATP-independent periplasmic transporter, DctM component
PHCCMDOK_01880	4.74e-67	-	-	-	S	-	-	-	Domain of unknown function (DUF1850)
PHCCMDOK_01881	1.01e-151	-	-	-	S	ko:K07080	-	ko00000	NMT1-like family
PHCCMDOK_01882	0.0	-	-	-	M	ko:K05020	-	ko00000,ko02000	Belongs to the BCCT transporter (TC 2.A.15) family
PHCCMDOK_01883	5.23e-151	ktrA	-	-	P	ko:K03499	-	ko00000,ko02000	COG0569 K transport systems, NAD-binding component
PHCCMDOK_01884	5.54e-210	ycgS	-	-	I	-	-	-	alpha/beta hydrolase fold
PHCCMDOK_01885	5.8e-271	yutK	-	-	F	ko:K03317	-	ko00000	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
PHCCMDOK_01886	1.52e-125	flaR	-	-	F	-	-	-	topology modulation protein
PHCCMDOK_01888	4.11e-11	-	-	-	S	ko:K06327	-	ko00000	Inner spore coat protein D
PHCCMDOK_01889	7.51e-111	ftnA	1.16.3.2	-	P	ko:K02217	-	ko00000,ko01000	Iron-storage protein
PHCCMDOK_01890	1.99e-216	yueF	-	-	S	-	-	-	transporter activity
PHCCMDOK_01891	0.0	nnrD	4.2.1.136, 5.1.99.6	-	G	ko:K17758,ko:K17759	-	ko00000,ko01000	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PHCCMDOK_01892	0.0	uxaB	1.1.1.58	-	G	ko:K00041	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	tagaturonate reductase activity
PHCCMDOK_01893	0.0	uxaA	4.2.1.7	-	G	ko:K01685	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Altronate
PHCCMDOK_01894	1.36e-315	yteT	-	-	S	-	-	-	Oxidoreductase family, C-terminal alpha/beta domain
PHCCMDOK_01895	2.02e-156	yteU	-	-	S	-	-	-	Integral membrane protein
PHCCMDOK_01896	2.73e-101	-	-	-	G	-	-	-	carbohydrate transport
PHCCMDOK_01897	1.39e-283	yteR	3.2.1.172	GH105	G	ko:K15532	-	ko00000,ko01000	unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
PHCCMDOK_01898	0.0	-	3.2.1.37, 3.2.1.55	GH43,GH51	G	ko:K01198,ko:K01209	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
PHCCMDOK_01899	1.35e-212	-	-	-	E	-	-	-	Abhydrolase family
PHCCMDOK_01900	3.76e-189	ytcP3	-	-	G	ko:K17320	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_01901	6.89e-231	-	-	-	G	ko:K17319	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG4209 ABC-type polysaccharide transport system, permease component
PHCCMDOK_01902	0.0	-	-	-	G	ko:K17318	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PHCCMDOK_01903	0.0	-	-	-	K	-	-	-	Transcriptional regulator
PHCCMDOK_01904	7.46e-201	-	-	-	K	-	-	-	AraC-like ligand binding domain
PHCCMDOK_01905	2.03e-249	-	4.2.2.2	-	M	ko:K01728	ko00040,ko02024,map00040,map02024	ko00000,ko00001,ko01000	Pectic acid lyase
PHCCMDOK_01906	1.19e-133	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PHCCMDOK_01907	2.78e-167	ytbQ	1.1.1.203, 1.1.1.388	-	GM	ko:K18981,ko:K19243	ko00030,ko00053,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00053,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	NAD dependent epimerase/dehydratase family
PHCCMDOK_01908	0.0	-	3.2.1.51	GH95	G	ko:K15923	ko00511,map00511	ko00000,ko00001,ko01000	Glycosyl hydrolase family 65, N-terminal domain
PHCCMDOK_01909	0.0	lplA3	-	-	G	ko:K17318	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PHCCMDOK_01910	5.35e-216	lplC1	-	-	G	ko:K17320	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_01911	4.78e-223	-	-	-	P	ko:K17319	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_01912	0.0	-	-	-	T	ko:K07720	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	helix_turn_helix, arabinose operon control protein
PHCCMDOK_01913	0.0	-	2.7.13.3	-	T	ko:K07718	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHCCMDOK_01914	0.0	yicI	3.2.1.177	GH31	G	ko:K01811	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 31 family
PHCCMDOK_01915	1.2e-266	glcP1	-	-	G	ko:K08174	-	ko00000,ko02000	Major Facilitator Superfamily
PHCCMDOK_01916	4.85e-232	nagC_1	-	-	GK	-	-	-	ROK family
PHCCMDOK_01917	0.0	M1-1044	-	-	S	-	-	-	Belongs to the UPF0061 (SELO) family
PHCCMDOK_01918	4.59e-96	-	-	-	S	-	-	-	DinB superfamily
PHCCMDOK_01919	1.53e-209	-	-	-	Q	-	-	-	COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
PHCCMDOK_01920	1.34e-174	ygaJ	3.4.13.21	-	E	ko:K05995	-	ko00000,ko01000,ko01002	Belongs to the peptidase S51 family
PHCCMDOK_01921	5.54e-207	-	-	-	S	-	-	-	Alpha beta hydrolase
PHCCMDOK_01923	6.54e-95	dcd	3.5.4.13	-	F	ko:K01494	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	2'-deoxycytidine 5'-triphosphate deaminase (DCD)
PHCCMDOK_01924	2.87e-186	-	-	-	P	-	-	-	COG0370 Fe2 transport system protein B
PHCCMDOK_01925	5.91e-216	yjiA	-	-	S	-	-	-	Cobalamin biosynthesis protein CobW
PHCCMDOK_01926	1.5e-232	zinT	-	-	S	ko:K09815	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
PHCCMDOK_01927	0.0	psaA3	-	-	P	ko:K09815	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Zinc-uptake complex component A periplasmic
PHCCMDOK_01928	2.49e-166	adcC	-	-	P	ko:K02074,ko:K09817	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	'COG1121 ABC-type Mn Zn transport systems, ATPase component'
PHCCMDOK_01929	4.35e-159	adcB	-	-	P	ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
PHCCMDOK_01930	0.0	-	-	-	C	ko:K22187	ko00040,map00040	ko00000,ko00001,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PHCCMDOK_01931	1.16e-211	-	4.1.2.28, 4.3.3.7	-	EM	ko:K01714,ko:K22397	ko00040,ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00040,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Dihydrodipicolinate synthetase family
PHCCMDOK_01932	2.17e-208	-	4.2.1.141	-	S	ko:K14259	ko00040,map00040	ko00000,ko00001,ko01000	Fumarylacetoacetate (FAA) hydrolase family
PHCCMDOK_01933	3.53e-178	-	-	-	K	ko:K19333	-	ko00000,ko03000	helix_turn_helix isocitrate lyase regulation
PHCCMDOK_01934	0.0	-	4.2.1.82	-	EG	ko:K22396	ko00040,map00040	ko00000,ko00001,ko01000	Dehydratase family
PHCCMDOK_01935	1.28e-312	gntP	-	-	EG	ko:K03299	-	ko00000,ko02000	COG2610 H gluconate symporter and related permeases
PHCCMDOK_01936	3.78e-41	-	-	-	K	-	-	-	MerR family transcriptional regulator
PHCCMDOK_01937	2.11e-172	-	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
PHCCMDOK_01938	1.05e-123	-	-	-	-	-	-	-	-
PHCCMDOK_01939	1.11e-291	rlmCD	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PHCCMDOK_01940	2.31e-122	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PHCCMDOK_01941	7.37e-138	adaA	-	-	K	ko:K13530	-	ko00000,ko01000,ko03000,ko03400	Transcriptional regulator
PHCCMDOK_01942	8.56e-217	alkA	3.2.2.21	-	L	ko:K01247,ko:K13529	ko03410,map03410	ko00000,ko00001,ko01000,ko03000,ko03400	COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
PHCCMDOK_01943	8.21e-269	-	1.1.1.18, 1.1.1.369	-	S	ko:K00010	ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130	ko00000,ko00001,ko01000	Oxidoreductase family, NAD-binding Rossmann fold
PHCCMDOK_01944	1.2e-214	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PHCCMDOK_01945	6.12e-190	yxeH	-	-	S	-	-	-	hydrolases of the HAD superfamily
PHCCMDOK_01946	2.01e-113	dinB	-	-	S	-	-	-	DinB family
PHCCMDOK_01947	5.27e-207	yobV	-	-	K	-	-	-	WYL domain
PHCCMDOK_01948	5.82e-130	-	-	-	S	-	-	-	Bacteriocin-protection, YdeI or OmpD-Associated
PHCCMDOK_01949	1.67e-161	-	-	-	IQ	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
PHCCMDOK_01950	1.77e-235	-	2.4.99.17	-	J	ko:K07568	-	ko00000,ko01000,ko03016	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PHCCMDOK_01952	3.12e-145	yhcZ	-	-	K	ko:K02479	-	ko00000,ko02022	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PHCCMDOK_01953	7.52e-263	yhcY	2.7.13.3	-	T	ko:K02480	-	ko00000,ko01000,ko01001,ko02022	Histidine kinase
PHCCMDOK_01954	3.77e-52	-	-	-	-	-	-	-	-
PHCCMDOK_01955	6.45e-12	-	-	-	-	-	-	-	-
PHCCMDOK_01956	8.19e-143	yrzF	-	-	KLT	-	-	-	serine threonine protein kinase
PHCCMDOK_01957	2.08e-112	-	-	-	K	-	-	-	Transcriptional regulator
PHCCMDOK_01958	1.15e-179	-	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
PHCCMDOK_01959	1.33e-140	-	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	2-dehydro-3-deoxy-phosphogluconate aldolase
PHCCMDOK_01960	4.69e-28	-	-	-	K	ko:K07729,ko:K20388	ko02024,map02024	ko00000,ko00001,ko03000	sequence-specific DNA binding
PHCCMDOK_01963	6.89e-171	-	-	-	-	-	-	-	-
PHCCMDOK_01964	2.21e-157	yhcG	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PHCCMDOK_01965	1.24e-81	-	-	-	K	-	-	-	helix_turn_helix gluconate operon transcriptional repressor
PHCCMDOK_01967	1.1e-156	-	-	-	-	-	-	-	-
PHCCMDOK_01968	3.74e-204	-	-	-	S	-	-	-	NYN domain
PHCCMDOK_01969	8.83e-69	-	-	-	K	-	-	-	sequence-specific DNA binding
PHCCMDOK_01970	2.95e-29	-	-	-	K	-	-	-	sequence-specific DNA binding
PHCCMDOK_01971	0.0	-	3.2.1.52	-	G	ko:K01207	ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501	ko00000,ko00001,ko00002,ko01000	Belongs to the glycosyl hydrolase 3 family
PHCCMDOK_01972	2.98e-315	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PHCCMDOK_01973	2.42e-206	-	-	-	G	ko:K02025,ko:K17238	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_01974	1.39e-200	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_01975	9.03e-256	-	-	-	E	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PHCCMDOK_01976	1.79e-131	-	-	-	-	-	-	-	-
PHCCMDOK_01978	3.84e-233	scrR	-	-	K	ko:K02529,ko:K03484	-	ko00000,ko03000	transcriptional
PHCCMDOK_01979	6.8e-224	-	-	-	G	ko:K17319	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG4209 ABC-type polysaccharide transport system, permease component
PHCCMDOK_01980	1.15e-206	lplC7	-	-	G	ko:K17320	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0395 ABC-type sugar transport system, permease component
PHCCMDOK_01981	0.0	-	-	-	G	ko:K17318	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PHCCMDOK_01982	0.0	-	3.2.1.80	-	G	ko:K03332	ko00051,map00051	ko00000,ko00001,ko01000	invertase
PHCCMDOK_01983	0.0	cscA	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
PHCCMDOK_01984	9.95e-165	fabG9	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
PHCCMDOK_01985	7.15e-280	yaaH	-	-	M	ko:K06306	-	ko00000	Glycoside Hydrolase Family
PHCCMDOK_01986	2.24e-37	-	-	-	-	-	-	-	-
PHCCMDOK_01987	6.86e-126	pncA	-	-	Q	-	-	-	COG1335 Amidases related to nicotinamidase
PHCCMDOK_01988	6.94e-146	ymaB	-	-	S	-	-	-	MutT family
PHCCMDOK_01989	3.1e-246	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PHCCMDOK_01990	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PHCCMDOK_01991	4.03e-83	nrdI	-	-	F	ko:K03647	-	ko00000	Probably involved in ribonucleotide reductase function
PHCCMDOK_01992	2.74e-167	-	-	-	E	-	-	-	lipolytic protein G-D-S-L family
PHCCMDOK_01993	5.17e-249	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PHCCMDOK_01994	0.0	tuaA	-	-	M	-	-	-	COG2148 Sugar transferases involved in lipopolysaccharide synthesis
PHCCMDOK_01995	3.35e-292	tagF	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
PHCCMDOK_01996	7.68e-173	-	-	-	I	-	-	-	CDP-alcohol phosphatidyltransferase
PHCCMDOK_01997	7.06e-93	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Cytidylyltransferase
PHCCMDOK_01998	0.0	-	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PHCCMDOK_01999	0.0	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PHCCMDOK_02000	1.4e-206	-	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
PHCCMDOK_02001	4.91e-78	ywdK	-	-	S	-	-	-	small membrane protein
PHCCMDOK_02002	1.58e-140	ykwB	-	-	K	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PHCCMDOK_02003	0.0	putP	-	-	E	ko:K11928	-	ko00000,ko02000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PHCCMDOK_02004	1.79e-61	-	-	-	S	-	-	-	Family of unknown function (DUF5327)
PHCCMDOK_02005	1.24e-170	polC1	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases
PHCCMDOK_02006	8.8e-214	-	-	-	T	ko:K07182	-	ko00000	Putative nucleotidyltransferase substrate binding domain
PHCCMDOK_02007	7.97e-294	nrgA	-	-	P	ko:K03320	-	ko00000,ko02000	Ammonium transporter
PHCCMDOK_02008	4.03e-223	-	-	-	S	ko:K07120	-	ko00000	Pfam:AmoA
PHCCMDOK_02009	6.67e-174	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PHCCMDOK_02010	2.54e-297	-	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_02011	1.29e-190	pdxK	2.7.1.35, 2.7.1.49, 2.7.4.7	-	H	ko:K00868,ko:K00941	ko00730,ko00750,ko01100,map00730,map00750,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
PHCCMDOK_02012	0.0	hutH	4.3.1.3	-	E	ko:K01745	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Histidine ammonia-lyase
PHCCMDOK_02013	8.36e-63	azlD	-	-	S	-	-	-	Branched-chain amino acid transport protein (AzlD)
PHCCMDOK_02014	1.65e-159	-	-	-	E	-	-	-	AzlC protein
PHCCMDOK_02015	8.99e-31	gntR9	-	-	K	-	-	-	Alanine-glyoxylate amino-transferase
PHCCMDOK_02016	1.51e-38	bceB	-	-	V	ko:K11632,ko:K19080	ko01503,ko02010,ko02020,ko05150,map01503,map02010,map02020,map05150	ko00000,ko00001,ko00002,ko01504,ko02000	ABC transporter (permease)
PHCCMDOK_02017	6.29e-309	-	-	-	S	-	-	-	dienelactone hydrolase
PHCCMDOK_02018	0.0	-	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	Glutamine synthetase, catalytic domain
PHCCMDOK_02019	6.26e-94	-	-	-	S	-	-	-	Protein of unknown function (DUF4064)
PHCCMDOK_02020	1.37e-98	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PHCCMDOK_02021	0.0	cshA	3.6.4.13	-	JKL	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PHCCMDOK_02022	1.39e-101	bdbA	-	-	CO	-	-	-	Thioredoxin
PHCCMDOK_02023	2.52e-93	bdbC	-	-	O	ko:K03611	-	ko00000,ko03110	Required for disulfide bond formation in some proteins
PHCCMDOK_02024	0.0	yhfW	-	-	CE	-	-	-	COG0665 Glycine D-amino acid oxidases (deaminating)
PHCCMDOK_02026	3.41e-108	yuaF	-	-	OU	-	-	-	Membrane protein implicated in regulation of membrane protease activity
PHCCMDOK_02027	1.89e-240	yuaG	-	-	S	ko:K07192	ko04910,map04910	ko00000,ko00001,ko03036,ko04131,ko04147	protein conserved in bacteria
PHCCMDOK_02028	2.19e-166	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine aminopeptidase
PHCCMDOK_02029	4.31e-312	phoB	3.1.3.1	-	P	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	Belongs to the alkaline phosphatase family
PHCCMDOK_02030	0.0	topB	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PHCCMDOK_02031	4.01e-280	ywbD	2.1.1.191	-	J	ko:K06969	-	ko00000,ko01000,ko03009	Methyltransferase
PHCCMDOK_02032	4.66e-56	ydzA	-	-	EGP	-	-	-	Domain of unknown function (DUF3817)
PHCCMDOK_02033	7.27e-73	yflT	-	-	S	-	-	-	Heat induced stress protein YflT
PHCCMDOK_02034	2.04e-128	-	-	-	S	-	-	-	UPF0302 domain
PHCCMDOK_02035	2.76e-192	mntD	-	-	P	ko:K11709,ko:K19976	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	'COG1108 ABC-type Mn2 Zn2 transport systems, permease components'
PHCCMDOK_02036	1.62e-204	XK27_03890	-	-	P	ko:K11705,ko:K11708,ko:K19976	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1108 ABC-type Mn2 Zn2 transport systems, permease components
PHCCMDOK_02037	1.14e-179	mntB	3.6.3.35	-	P	ko:K02074,ko:K09820,ko:K11710,ko:K19973	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	'COG1121 ABC-type Mn Zn transport systems, ATPase component'
PHCCMDOK_02038	1.8e-221	troA	-	-	P	ko:K11707	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
PHCCMDOK_02040	8.04e-187	ycsE	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolases of the HAD superfamily
PHCCMDOK_02041	0.0	dapE	-	-	E	-	-	-	Peptidase dimerisation domain
PHCCMDOK_02042	2.9e-275	-	-	-	S	-	-	-	Acetyltransferase
PHCCMDOK_02043	0.0	mcpA	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis protein
PHCCMDOK_02044	0.0	pncB	6.3.4.21	-	H	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PHCCMDOK_02045	7.59e-269	yxlH	-	-	EGP	-	-	-	Major Facilitator Superfamily
PHCCMDOK_02046	1.43e-123	-	-	-	S	-	-	-	DinB superfamily
PHCCMDOK_02047	0.0	katX	1.11.1.6	-	P	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	ko00000,ko00001,ko00002,ko01000	serves to protect cells from the toxic effects of hydrogen peroxide
PHCCMDOK_02048	0.0	ywjA	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
PHCCMDOK_02049	2.36e-216	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	cell wall formation
PHCCMDOK_02050	1.29e-140	ywrF	-	-	S	-	-	-	COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
PHCCMDOK_02051	2.38e-141	yrbG	-	-	S	-	-	-	membrane
PHCCMDOK_02052	8.45e-210	bmrU	-	-	I	-	-	-	COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
PHCCMDOK_02054	3.01e-08	-	-	-	-	-	-	-	-
PHCCMDOK_02055	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 2 family
PHCCMDOK_02056	1.02e-91	-	-	-	K	ko:K22293	-	ko00000,ko03000	FCD
PHCCMDOK_02057	1.09e-145	-	-	-	S	-	-	-	Oxidoreductase family, C-terminal alpha/beta domain
PHCCMDOK_02058	2.77e-140	-	-	-	G	-	-	-	COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component
PHCCMDOK_02059	1.57e-55	-	-	-	G	-	-	-	Tripartite ATP-independent periplasmic transporters, DctQ component
PHCCMDOK_02060	8.36e-223	-	-	-	G	-	-	-	C4-dicarboxylate ABC transporter permease
PHCCMDOK_02062	5.45e-128	-	-	-	G	-	-	-	Xylose isomerase-like TIM barrel
PHCCMDOK_02063	9.34e-139	-	2.3.3.1	-	C	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Citrate synthase, C-terminal domain
PHCCMDOK_02064	2.77e-230	-	-	-	C	-	-	-	Belongs to the aldehyde dehydrogenase family
PHCCMDOK_02065	2.2e-139	-	1.1.1.14	-	E	ko:K00008	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko00002,ko01000	Alcohol dehydrogenase GroES-like domain
PHCCMDOK_02066	0.0	-	2.2.1.6	-	EH	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Thiamine pyrophosphate enzyme, central domain
PHCCMDOK_02067	1e-242	-	-	-	C	-	-	-	acyl-CoA transferases carnitine dehydratase
PHCCMDOK_02068	1.11e-101	-	-	-	S	-	-	-	ASCH
PHCCMDOK_02069	4.01e-100	nsrR	-	-	K	ko:K13771	ko05132,map05132	ko00000,ko00001,ko03000	Transcriptional regulator
PHCCMDOK_02070	3.22e-69	-	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
PHCCMDOK_02071	1.69e-232	cbrA5	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Ferrichrome ABC transporter substrate-binding protein
PHCCMDOK_02072	0.0	fhuB5	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PHCCMDOK_02073	3.65e-173	-	-	-	P	ko:K02049	-	ko00000,ko00002,ko02000	COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component
PHCCMDOK_02074	5.82e-192	-	-	-	P	ko:K02050,ko:K15552	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_02075	9.37e-241	-	-	-	P	-	-	-	NMT1-like family
PHCCMDOK_02077	8.94e-179	-	-	-	P	ko:K02049,ko:K15555	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component
PHCCMDOK_02078	7.26e-185	-	-	-	P	ko:K02050	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_02079	3.7e-234	-	-	-	P	-	-	-	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components
PHCCMDOK_02080	1.39e-233	pucA	1.17.1.4	-	O	ko:K00087,ko:K07402	ko00230,ko01100,ko01120,map00230,map01100,map01120	ko00000,ko00001,ko00002,ko01000	COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
PHCCMDOK_02081	4.28e-129	pucB	1.17.1.4, 2.7.7.76	-	S	ko:K00087,ko:K07141	ko00230,ko00790,ko01100,ko01120,map00230,map00790,map01100,map01120	ko00000,ko00001,ko00002,ko01000	MobA-like NTP transferase domain
PHCCMDOK_02082	1.15e-202	pucC	1.17.1.4, 1.2.5.3	-	C	ko:K00087,ko:K03519	ko00230,ko01100,ko01120,map00230,map01100,map01120	ko00000,ko00001,ko00002,ko01000	COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM CutM homologs
PHCCMDOK_02083	0.0	pucD	1.17.1.4	-	C	ko:K00087	ko00230,ko01100,ko01120,map00230,map01100,map01120	ko00000,ko00001,ko00002,ko01000	COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs
PHCCMDOK_02084	2.44e-111	-	1.17.1.4, 1.2.5.3	-	C	ko:K00087,ko:K03518	ko00230,ko01100,ko01120,map00230,map01100,map01120	ko00000,ko00001,ko00002,ko01000	COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs
PHCCMDOK_02085	1.04e-309	pucG	2.6.1.112, 2.6.1.44, 2.6.1.45, 2.6.1.51	-	E	ko:K00830,ko:K00839	ko00230,ko00250,ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko04146,map00230,map00250,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map04146	ko00000,ko00001,ko00002,ko01000,ko01007	COG0075 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase
PHCCMDOK_02086	4.42e-289	pucF	3.5.3.9	-	E	ko:K02083	ko00230,ko01120,map00230,map01120	ko00000,ko00001,ko01000,ko01002	COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases
PHCCMDOK_02087	0.0	pucR	-	-	QT	ko:K09684	-	ko00000,ko03000	COG2508 Regulator of polyketide synthase expression
PHCCMDOK_02088	1.92e-113	-	-	-	S	-	-	-	OHCU decarboxylase
PHCCMDOK_02089	1.19e-224	-	1.7.3.3, 4.1.1.97	-	Q	ko:K16838	ko00230,ko00232,ko01100,ko01120,map00230,map00232,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of uric acid to 5- hydroxyisourate, which is further processed to form (S)-allantoin
PHCCMDOK_02090	3.78e-74	pucM	3.5.2.17	-	S	ko:K07127	ko00230,ko01100,ko01120,map00230,map01100,map01120	ko00000,ko00001,ko00002,ko01000,ko02000	Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily
PHCCMDOK_02091	0.0	-	-	-	S	-	-	-	Membrane
PHCCMDOK_02092	2.29e-308	allB	3.5.2.5	-	F	ko:K01466	ko00230,ko01100,ko01120,map00230,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of allantoin (5- ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring
PHCCMDOK_02093	8.24e-271	-	3.5.1.4	-	J	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	ko00000,ko00001,ko01000	Belongs to the amidase family
PHCCMDOK_02095	8.35e-176	yqjF	-	-	S	ko:K09166	-	ko00000	Uncharacterized conserved protein (COG2071)
PHCCMDOK_02096	3.03e-63	ycbP	-	-	S	-	-	-	Protein of unknown function (DUF2512)
PHCCMDOK_02097	2e-120	yvdQ	-	-	S	-	-	-	Protein of unknown function (DUF3231)
PHCCMDOK_02098	2.66e-290	-	-	-	S	-	-	-	Putative esterase
PHCCMDOK_02099	7.08e-196	tetM	-	-	J	ko:K18220	-	br01600,ko00000,ko01504	Elongation factor G, domain IV
PHCCMDOK_02100	1.64e-225	-	-	-	L	ko:K07496	-	ko00000	Transposase
PHCCMDOK_02101	1.19e-103	-	-	-	GM	-	-	-	NAD dependent epimerase/dehydratase family
PHCCMDOK_02102	2.6e-103	-	-	-	GM	-	-	-	NAD dependent epimerase/dehydratase family
PHCCMDOK_02103	1.33e-181	-	-	-	S	-	-	-	Alpha/beta hydrolase family
PHCCMDOK_02104	1.78e-118	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PHCCMDOK_02105	6.37e-191	punA	2.4.2.1, 2.4.2.28	-	F	ko:K00772,ko:K03783	ko00230,ko00240,ko00270,ko00760,ko01100,ko01110,map00230,map00240,map00270,map00760,map01100,map01110	ko00000,ko00001,ko00002,ko01000	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
PHCCMDOK_02106	4.92e-219	-	2.7.1.194	-	GKT	ko:K02821,ko:K03483	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000,ko03000	COG3711 Transcriptional antiterminator
PHCCMDOK_02107	4.17e-42	-	2.7.1.194	-	G	ko:K02822	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
PHCCMDOK_02108	1.64e-229	ulaA	-	-	S	ko:K03475	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	PTS system ascorbate-specific transporter subunit IIC
PHCCMDOK_02109	2.58e-108	-	-	-	G	ko:K17195	ko00051,ko01120,map00051,map01120	ko00000,ko00001,ko01000	Ribulose-phosphate 3 epimerase family
PHCCMDOK_02110	8.19e-162	ssuB	-	-	P	ko:K02049,ko:K15555	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system
PHCCMDOK_02111	2.12e-177	ssuC	-	-	P	ko:K15554	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component
PHCCMDOK_02112	4.1e-237	-	-	-	P	ko:K02051,ko:K15553	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PHCCMDOK_02113	1.71e-203	-	-	-	E	-	-	-	Glyoxalase-like domain
PHCCMDOK_02114	4.4e-172	-	-	-	G	-	-	-	Phosphoenolpyruvate phosphomutase
PHCCMDOK_02115	1.42e-131	yvaZ	-	-	S	-	-	-	Immunity protein that provides protection for the cell against the toxic effects of SDP, its own SdpC-derived killing factor, and that functions as a receptor signal transduction protein as well. Once SDP accumulates in the extracellular milieu, SdpI binds to SDP, causing sequestration of SdpR at the bacterial membrane
PHCCMDOK_02116	7.93e-59	sdpR	-	-	K	-	-	-	transcriptional
PHCCMDOK_02117	2.12e-197	-	-	-	K	-	-	-	LysR substrate binding domain
PHCCMDOK_02118	1.14e-150	mdmC1	-	-	S	-	-	-	O-methyltransferase
PHCCMDOK_02119	0.0	yrbD	-	-	E	ko:K03310	-	ko00000	Sodium alanine symporter
PHCCMDOK_02120	2.66e-167	ycdF	1.1.1.47	-	IQ	ko:K00034	ko00030,ko01120,ko01200,map00030,map01120,map01200	ko00000,ko00001,ko01000	Short-chain dehydrogenase reductase sdr
PHCCMDOK_02121	1.22e-100	-	-	-	S	-	-	-	Bacterial PH domain
PHCCMDOK_02122	2.12e-23	-	-	-	S	-	-	-	Family of unknown function (DUF5344)
PHCCMDOK_02123	1.27e-59	-	-	-	S	-	-	-	LXG domain of WXG superfamily
PHCCMDOK_02129	7.57e-59	-	-	-	-	-	-	-	-
PHCCMDOK_02130	1.34e-40	-	-	-	S	-	-	-	Domain of unknown function (DUF5082)
PHCCMDOK_02131	2.73e-134	-	-	-	K	ko:K16137	-	ko00000,ko03000	Bacterial regulatory proteins, tetR family
PHCCMDOK_02132	3.81e-253	-	-	-	C	-	-	-	NADH:flavin oxidoreductase / NADH oxidase family
PHCCMDOK_02133	0.0	gerAA	-	-	EG	ko:K06288,ko:K06310	-	ko00000	Spore germination protein
PHCCMDOK_02134	4.24e-232	gerAB	-	-	E	ko:K06289,ko:K06292	-	ko00000,ko02000	Spore germination protein
PHCCMDOK_02135	4.29e-255	gerAC	-	-	S	ko:K06290,ko:K06293,ko:K06312	-	ko00000	Spore germination B3/ GerAC like, C-terminal
PHCCMDOK_02136	4.93e-233	rapA	-	-	S	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	ko00000,ko00001,ko01000	Response regulator aspartate phosphatase
PHCCMDOK_02139	6.3e-198	hag	-	-	N	ko:K02406	ko02020,ko02040,ko04621,ko04626,ko05132,ko05134,map02020,map02040,map04621,map04626,map05132,map05134	ko00000,ko00001,ko02035	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
PHCCMDOK_02140	9.15e-207	-	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
PHCCMDOK_02141	1.59e-143	cpsE	-	-	M	ko:K13012,ko:K19428	-	ko00000,ko01000,ko01005	Bacterial sugar transferase
PHCCMDOK_02142	8.58e-99	rfbX	-	-	S	-	-	-	Membrane protein involved in the export of O-antigen and teichoic acid
PHCCMDOK_02143	2.89e-93	-	-	-	C	-	-	-	Nitroreductase family
PHCCMDOK_02144	3.37e-88	-	-	-	S	ko:K16710	-	ko00000	PFAM Polysaccharide pyruvyl transferase
PHCCMDOK_02145	1.71e-89	-	-	-	M	-	-	-	Glycosyl transferases group 1
PHCCMDOK_02146	1.31e-92	-	-	-	M	-	-	-	Glycosyl transferases group 1
PHCCMDOK_02147	9.18e-113	-	-	-	M	-	-	-	Glycosyl transferase 4-like
PHCCMDOK_02148	1.46e-80	-	-	-	-	-	-	-	-
PHCCMDOK_02149	1.16e-36	-	-	-	G	-	-	-	Cellulase (glycosyl hydrolase family 5)
PHCCMDOK_02150	1.34e-273	-	2.7.7.13	-	G	ko:K00971	ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110	ko00000,ko00001,ko00002,ko01000	mannose-1-phosphate guanylyltransferase
PHCCMDOK_02151	5.22e-310	-	1.1.1.22	-	M	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PHCCMDOK_02152	6.77e-48	-	-	-	S	-	-	-	Domain of unknown function (DUF3784)
PHCCMDOK_02154	1.05e-162	-	-	-	K	-	-	-	AraC-type transcriptional regulator N-terminus
PHCCMDOK_02155	2.14e-65	-	-	-	S	-	-	-	Agrobacterium tumefaciens protein Atu4866
PHCCMDOK_02156	1.59e-144	-	-	-	S	-	-	-	Enoyl-(Acyl carrier protein) reductase
PHCCMDOK_02158	3.41e-128	-	1.6.5.2	-	S	ko:K00355	ko00130,ko01110,ko05200,ko05225,ko05418,map00130,map01110,map05200,map05225,map05418	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
PHCCMDOK_02159	1.62e-87	ytcD	-	-	K	-	-	-	Transcriptional regulator
PHCCMDOK_02160	3.61e-146	-	-	-	L	ko:K07497	-	ko00000	COG2801 Transposase and inactivated derivatives
PHCCMDOK_02161	2.59e-41	-	-	-	L	ko:K07483	-	ko00000	Transposase
PHCCMDOK_02164	1.69e-136	-	-	-	S	-	-	-	LXG domain of WXG superfamily
PHCCMDOK_02170	0.0	-	-	-	S	ko:K08981	-	ko00000	Bacterial PH domain
PHCCMDOK_02171	9.28e-113	-	-	-	S	ko:K09167	-	ko00000	Bacterial PH domain
PHCCMDOK_02172	3.24e-143	-	-	-	S	-	-	-	CAAX protease self-immunity
PHCCMDOK_02174	2.85e-316	-	3.2.1.86	GT4	G	ko:K01222	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
PHCCMDOK_02175	2.22e-61	-	-	-	-	-	-	-	-
PHCCMDOK_02176	1.43e-291	celD	2.7.1.207	-	G	ko:K02761,ko:K02787,ko:K02788	ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PHCCMDOK_02177	7.7e-67	-	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
PHCCMDOK_02178	1.13e-66	-	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIA subunit
PHCCMDOK_02179	6.72e-266	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
PHCCMDOK_02180	6.62e-196	-	-	-	G	-	-	-	BadF/BadG/BcrA/BcrD ATPase family
PHCCMDOK_02181	8.52e-211	-	-	-	K	-	-	-	Transcriptional regulator
PHCCMDOK_02183	0.0	-	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
PHCCMDOK_02184	2.04e-200	appB	-	-	P	ko:K02033	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_02185	5.32e-213	-	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	N-terminal TM domain of oligopeptide transport permease C
PHCCMDOK_02186	1.3e-236	-	-	-	P	ko:K02031,ko:K15583,ko:K16202	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHCCMDOK_02187	2.36e-246	-	-	-	E	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHCCMDOK_02188	2.86e-286	-	-	-	E	-	-	-	Peptidase family M28
PHCCMDOK_02189	0.0	-	-	-	P	-	-	-	Sodium:sulfate symporter transmembrane region
PHCCMDOK_02190	3.96e-279	-	-	-	S	ko:K12941,ko:K21613	-	ko00000,ko01000,ko01002	Peptidase dimerisation domain
PHCCMDOK_02191	1.16e-286	-	-	-	S	ko:K12941,ko:K21613	-	ko00000,ko01000,ko01002	Peptidase dimerisation domain
PHCCMDOK_02192	6.2e-114	-	-	-	-	-	-	-	-
PHCCMDOK_02194	9.18e-242	-	-	-	P	ko:K02012	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PHCCMDOK_02195	1.14e-254	fbpC	3.6.3.30	-	P	ko:K02010,ko:K02052	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PHCCMDOK_02196	0.0	sfuB	-	-	P	ko:K02011	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_02197	0.0	-	-	-	T	-	-	-	Histidine kinase
PHCCMDOK_02198	1.68e-177	-	-	-	T	ko:K07720	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	helix_turn_helix, arabinose operon control protein
PHCCMDOK_02199	1.9e-258	rapA	-	-	S	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	ko00000,ko00001,ko01000	Response regulator aspartate phosphatase
PHCCMDOK_02200	1.74e-164	-	-	-	S	ko:K07010	-	ko00000,ko01002	Peptidase C26
PHCCMDOK_02201	5.87e-198	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PHCCMDOK_02202	4.78e-46	-	-	-	-	-	-	-	-
PHCCMDOK_02203	1.39e-49	-	-	-	-	-	-	-	-
PHCCMDOK_02204	1.37e-193	rapA	-	-	S	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	ko00000,ko00001,ko01000	Response regulator aspartate phosphatase
PHCCMDOK_02205	1.11e-264	-	-	-	S	ko:K07148	-	ko00000	Protein of unknown function (DUF418)
PHCCMDOK_02206	4.27e-21	-	-	-	-	-	-	-	-
PHCCMDOK_02207	1.02e-36	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PHCCMDOK_02208	1.08e-211	-	-	-	S	ko:K06911	-	ko00000	Belongs to the pirin family
PHCCMDOK_02209	2.54e-77	ydeP9	-	-	K	-	-	-	HxlR-like helix-turn-helix
PHCCMDOK_02210	8.43e-316	-	-	-	F	-	-	-	Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine
PHCCMDOK_02211	1.66e-216	aadK	-	-	G	ko:K05593	-	ko00000,ko01000,ko01504	Streptomycin adenylyltransferase
PHCCMDOK_02212	6.56e-222	-	-	-	P	ko:K07217	-	ko00000	Catalase
PHCCMDOK_02213	8.98e-55	-	-	-	S	-	-	-	Protein of unknown function (DUF2642)
PHCCMDOK_02215	8.09e-260	rapA	-	-	S	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	ko00000,ko00001,ko01000	Response regulator aspartate phosphatase
PHCCMDOK_02216	3.21e-168	-	-	-	K	ko:K19333	-	ko00000,ko03000	Transcriptional regulator
PHCCMDOK_02217	1.93e-243	-	-	-	G	-	-	-	COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component
PHCCMDOK_02218	2.71e-109	-	-	-	G	ko:K11689	ko02020,map02020	ko00000,ko00001,ko02000	Tripartite ATP-independent periplasmic transporters, DctQ component
PHCCMDOK_02219	8.85e-276	-	-	-	G	-	-	-	Tripartite ATP-independent periplasmic transporter, DctM component
PHCCMDOK_02220	1.82e-178	-	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
PHCCMDOK_02221	2.25e-118	-	-	-	S	-	-	-	DNA-binding protein with PD1-like DNA-binding motif
PHCCMDOK_02222	0.0	-	6.2.1.3	-	IQ	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
PHCCMDOK_02223	1.03e-264	-	2.3.1.9	-	I	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Thiolase, C-terminal domain
PHCCMDOK_02224	3.92e-74	-	-	-	S	ko:K07068	-	ko00000	DUF35 OB-fold domain, acyl-CoA-associated
PHCCMDOK_02225	6.73e-305	yoaB	-	-	EGP	-	-	-	the major facilitator superfamily
PHCCMDOK_02226	9.61e-271	-	1.1.1.14	-	E	ko:K00008	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko00002,ko01000	Dehydrogenase
PHCCMDOK_02227	2.28e-173	-	-	-	IQ	-	-	-	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PHCCMDOK_02228	3.1e-172	-	-	-	K	-	-	-	DeoR C terminal sensor domain
PHCCMDOK_02229	6.17e-104	rpiB	5.3.1.6	-	G	ko:K01808	ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribose/Galactose Isomerase
PHCCMDOK_02230	5.52e-241	dhaK	2.7.1.121	-	G	ko:K05878	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak1 domain
PHCCMDOK_02231	4.16e-143	-	2.7.1.121	-	S	ko:K05879	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak2
PHCCMDOK_02232	3.11e-222	-	3.1.3.11	-	G	ko:K02446	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
PHCCMDOK_02233	9.98e-215	-	4.3.3.7	-	EM	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Dihydrodipicolinate synthetase family
PHCCMDOK_02234	2.89e-225	-	-	-	S	-	-	-	Tripartite tricarboxylate transporter family receptor
PHCCMDOK_02236	0.0	-	-	-	S	ko:K07793	ko02020,map02020	ko00000,ko00001,ko02000	Tripartite tricarboxylate transporter TctA family
PHCCMDOK_02237	4.86e-201	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PHCCMDOK_02238	1.9e-232	-	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding protein domain
PHCCMDOK_02239	1.21e-135	-	-	-	-	-	-	-	-
PHCCMDOK_02240	4.05e-102	-	-	-	-	-	-	-	-
PHCCMDOK_02241	0.0	-	-	-	-	-	-	-	-
PHCCMDOK_02243	3.59e-173	-	-	-	G	-	-	-	ABC transporter (permease)
PHCCMDOK_02244	3.19e-177	-	-	-	G	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_02245	1.01e-246	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PHCCMDOK_02246	1.38e-269	-	2.7.13.3	-	T	ko:K07718	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHCCMDOK_02247	2.75e-192	-	-	-	T	ko:K07720	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	helix_turn_helix, arabinose operon control protein
PHCCMDOK_02248	1.89e-208	-	3.2.1.180	GH88	O	ko:K18581	-	ko00000,ko01000	Glycosyl Hydrolase Family 88
PHCCMDOK_02249	4.53e-284	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2264)
PHCCMDOK_02250	1.78e-244	-	-	-	S	-	-	-	Heparinase II/III-like protein
PHCCMDOK_02251	0.0	-	-	-	M	-	-	-	Glycosyl hydrolase family 59
PHCCMDOK_02252	5.23e-102	-	-	-	S	-	-	-	yiaA/B two helix domain
PHCCMDOK_02254	0.0	-	-	-	M	-	-	-	Belongs to the BCCT transporter (TC 2.A.15) family
PHCCMDOK_02255	2.31e-108	-	-	-	-	-	-	-	-
PHCCMDOK_02257	1.52e-205	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase, Mutator family
PHCCMDOK_02258	1.75e-69	-	-	-	S	-	-	-	Short C-terminal domain
PHCCMDOK_02259	9.65e-271	-	1.1.1.38	-	C	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	ko00000,ko00001,ko01000	Malate dehydrogenase
PHCCMDOK_02260	3.83e-312	malP	-	-	C	ko:K11616	ko02020,map02020	ko00000,ko00001	COG3493 Na citrate symporter
PHCCMDOK_02261	8.29e-161	dcuR	-	-	T	ko:K02475,ko:K11615	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG4565 Response regulator of citrate malate metabolism
PHCCMDOK_02262	0.0	malK	2.7.13.3	-	T	ko:K02476,ko:K11614,ko:K11637	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Signal transduction histidine kinase regulating citrate malate metabolism
PHCCMDOK_02263	2.91e-94	-	-	-	M	-	-	-	ArpU family transcriptional regulator
PHCCMDOK_02264	6.89e-192	-	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	COG1126 ABC-type polar amino acid transport system, ATPase component
PHCCMDOK_02265	1.09e-151	-	-	-	E	ko:K02029,ko:K10009	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_02266	7.32e-144	-	-	-	E	ko:K02029	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_02267	1.1e-190	tcyA_1	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	Bacterial periplasmic substrate-binding proteins
PHCCMDOK_02268	5.88e-173	-	-	-	-	-	-	-	-
PHCCMDOK_02269	2.48e-193	-	-	-	S	ko:K07025	-	ko00000	Haloacid dehalogenase-like hydrolase
PHCCMDOK_02270	2.22e-231	csbB	-	GT2	M	ko:K20534	-	ko00000,ko01000,ko01005,ko02000	COG0463 Glycosyltransferases involved in cell wall biogenesis
PHCCMDOK_02271	2.07e-90	-	-	-	S	-	-	-	GtrA-like protein
PHCCMDOK_02272	0.0	yfhO	-	-	S	-	-	-	Bacterial membrane protein YfhO
PHCCMDOK_02273	2.57e-10	-	-	-	-	-	-	-	-
PHCCMDOK_02274	1.75e-10	-	-	-	-	-	-	-	-
PHCCMDOK_02275	2.43e-111	-	-	-	S	-	-	-	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
PHCCMDOK_02276	2.66e-172	fdhD	-	-	C	ko:K02379	-	ko00000	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
PHCCMDOK_02277	3.27e-135	yjgD	-	-	S	-	-	-	Protein of unknown function (DUF1641)
PHCCMDOK_02278	0.0	yjgC	1.17.1.9	-	C	ko:K00123	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	ko00000,ko00001,ko01000	formate dehydrogenase (NAD+) activity
PHCCMDOK_02279	2.95e-181	nirC	-	-	P	ko:K02598	-	ko00000,ko02000	Formate/nitrite transporter
PHCCMDOK_02280	2.38e-46	moaD	-	-	H	ko:K03636	ko04122,map04122	ko00000,ko00001	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
PHCCMDOK_02281	2.79e-97	moaE	2.8.1.12	-	H	ko:K03635	ko00790,ko01100,ko04122,map00790,map01100,map04122	ko00000,ko00001,ko01000	COG0314 Molybdopterin converting factor, large subunit
PHCCMDOK_02282	2.24e-113	mobB	-	-	H	ko:K03753	-	ko00000	molybdopterin-guanine dinucleotide biosynthesis protein
PHCCMDOK_02283	1.11e-298	moeA	2.10.1.1	-	H	ko:K03750	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	molybdopterin
PHCCMDOK_02284	8.07e-235	moaA	4.1.99.22	-	H	ko:K03639	ko00790,ko01100,ko04122,map00790,map01100,map04122	ko00000,ko00001,ko01000	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
PHCCMDOK_02285	9.28e-108	moaB	2.7.7.75	-	H	ko:K03638	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	May be involved in the biosynthesis of molybdopterin
PHCCMDOK_02286	6.74e-126	mobA	2.7.7.77	-	H	ko:K03752	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
PHCCMDOK_02287	7.31e-114	moaC	4.6.1.17	-	H	ko:K03637	ko00790,ko01100,ko04122,map00790,map01100,map04122	ko00000,ko00001,ko01000	Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)
PHCCMDOK_02288	0.0	yoaI	1.14.14.9	-	Q	ko:K00483	ko00350,ko01120,ko01220,map00350,map01120,map01220	ko00000,ko00001,ko01000	COG2368 Aromatic ring hydroxylase
PHCCMDOK_02289	2.12e-183	-	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PHCCMDOK_02290	3.39e-156	ypdP	-	-	S	ko:K09125	-	ko00000	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
PHCCMDOK_02291	4.77e-165	-	-	-	S	-	-	-	carbohydrate derivative metabolic process
PHCCMDOK_02292	1.25e-282	ulaA	-	-	S	ko:K03475	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	PTS system ascorbate-specific transporter subunit IIC
PHCCMDOK_02293	5.5e-56	-	2.7.1.194	-	G	ko:K02822	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG3414 Phosphotransferase system, galactitol-specific IIB component
PHCCMDOK_02294	1.37e-94	-	2.7.1.194	-	GT	ko:K02821,ko:K03483	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000,ko03000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PHCCMDOK_02295	0.0	-	-	-	G	-	-	-	Mga helix-turn-helix domain
PHCCMDOK_02296	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PHCCMDOK_02297	7.46e-59	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PHCCMDOK_02298	7.8e-152	ydiL	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PHCCMDOK_02299	4.84e-256	gldA	-	-	C	ko:K08317	-	ko00000,ko01000	COG0371 Glycerol dehydrogenase and related enzymes
PHCCMDOK_02300	1.09e-185	-	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1464 ABC-type metal ion transport system, periplasmic component surface antigen
PHCCMDOK_02301	1.31e-141	metP_2	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG2011 ABC-type metal ion transport system, permease component
PHCCMDOK_02302	5.64e-232	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PHCCMDOK_02303	1.16e-178	tatC	-	-	U	ko:K03118	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PHCCMDOK_02304	7.3e-34	tatA	-	-	U	ko:K03116	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
PHCCMDOK_02305	3.56e-145	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PHCCMDOK_02306	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter
PHCCMDOK_02307	2.91e-231	tsaD	2.3.1.234	-	O	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PHCCMDOK_02308	3.01e-112	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	This enzyme acetylates the N-terminal alanine of ribosomal protein S18
PHCCMDOK_02309	7.66e-163	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	COG1214 Inactive homolog of metal-dependent proteases
PHCCMDOK_02310	7.46e-106	ydiB	-	-	S	ko:K06925	-	ko00000,ko03016	ATPase or kinase
PHCCMDOK_02311	1.55e-228	thiL	2.7.4.16	-	H	ko:K00946	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
PHCCMDOK_02314	8.25e-271	-	2.5.1.48	-	E	ko:K01739	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
PHCCMDOK_02315	7.27e-73	crcB	-	-	D	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PHCCMDOK_02316	1.29e-77	crcB	-	-	D	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PHCCMDOK_02317	8.89e-156	sapB	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC SapB transporter
PHCCMDOK_02325	3.58e-55	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
PHCCMDOK_02326	3.92e-63	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	Required for transformation and DNA binding
PHCCMDOK_02327	6.14e-90	-	-	-	NU	ko:K02246	-	ko00000,ko00002,ko02044	general secretion pathway protein
PHCCMDOK_02329	2.01e-102	-	-	-	-	-	-	-	-
PHCCMDOK_02332	2.65e-48	B4168_0554	-	-	S	-	-	-	Protein of unknown function (DUF2626)
PHCCMDOK_02333	7.25e-153	yqgX	3.1.2.6	-	S	ko:K01069	ko00620,map00620	ko00000,ko00001,ko01000	COG0491 Zn-dependent hydrolases, including glyoxylases
PHCCMDOK_02335	8.12e-196	yqhG	-	-	S	-	-	-	Bacterial protein YqhG of unknown function
PHCCMDOK_02336	0.0	yqhH	-	-	L	-	-	-	COG0553 Superfamily II DNA RNA helicases, SNF2 family
PHCCMDOK_02337	2.23e-258	gcvT	2.1.2.10	-	E	ko:K00605	ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002,ko01000	The glycine cleavage system catalyzes the degradation of glycine
PHCCMDOK_02338	0.0	gcvPA	1.4.4.2	-	E	ko:K00282	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko01000	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PHCCMDOK_02339	0.0	gcvPB	1.4.4.2	-	E	ko:K00283	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko01000	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PHCCMDOK_02340	1.34e-81	yqhL	-	-	P	-	-	-	COG0607 Rhodanese-related sulfurtransferase
PHCCMDOK_02341	2.06e-195	lipM	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domain of GcvH, an intermediate carrier during protein lipoylation
PHCCMDOK_02342	0.0	uvrD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
PHCCMDOK_02343	1.4e-201	dat	2.6.1.21	-	E	ko:K00824	ko00310,ko00330,ko00360,ko00472,ko00473,ko01100,map00310,map00330,map00360,map00472,map00473,map01100	ko00000,ko00001,ko01000,ko01007	Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha- keto acid in the first half-reaction
PHCCMDOK_02344	1.43e-250	splB	4.1.99.14	-	L	ko:K03716	-	ko00000,ko01000	Spore photoproduct lyase
PHCCMDOK_02345	1.09e-99	mntR	-	-	K	ko:K03709	-	ko00000,ko03000	Involved in manganese homeostasis. Might activate the transcription of the mntABCD operon
PHCCMDOK_02346	9.09e-208	yqhO	-	-	S	ko:K07001	-	ko00000	esterase of the alpha-beta hydrolase superfamily
PHCCMDOK_02347	3.09e-73	-	-	-	-	-	-	-	-
PHCCMDOK_02348	4.24e-114	yqhR	-	-	S	-	-	-	Conserved membrane protein YqhR
PHCCMDOK_02349	3.62e-247	yqhT	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	COG0006 Xaa-Pro aminopeptidase
PHCCMDOK_02350	7.96e-127	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PHCCMDOK_02351	8.98e-122	aroK	2.7.1.71	-	F	ko:K00891	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PHCCMDOK_02352	2.02e-63	-	-	-	S	-	-	-	YfzA-like protein
PHCCMDOK_02353	2.71e-48	yqhV	-	-	S	-	-	-	Protein of unknown function (DUF2619)
PHCCMDOK_02354	2.08e-211	spoIIIAA	-	-	S	ko:K06390	-	ko00000	stage III sporulation protein AA
PHCCMDOK_02355	1.63e-105	spoIIIAB	-	-	S	ko:K06391	-	ko00000	Stage III sporulation protein
PHCCMDOK_02356	1.98e-40	spoIIIAC	-	-	S	ko:K06392	-	ko00000	stage III sporulation protein AC
PHCCMDOK_02357	6.3e-54	spoIIIAD	-	-	S	ko:K06393	-	ko00000	Stage III sporulation protein AD
PHCCMDOK_02358	1.32e-256	spoIIIAE	-	-	S	ko:K06394	-	ko00000	stage III sporulation protein AE
PHCCMDOK_02359	6.05e-116	spoIIIAF	-	-	S	ko:K06395	-	ko00000	Stage III sporulation protein AF (Spore_III_AF)
PHCCMDOK_02360	2.88e-144	spoIIIAG	-	-	S	ko:K06396	-	ko00000	stage III sporulation protein AG
PHCCMDOK_02361	1.41e-115	spoIIIAH	-	-	S	ko:K06397	-	ko00000	SpoIIIAH-like protein
PHCCMDOK_02362	3.08e-74	-	-	-	-	-	-	-	-
PHCCMDOK_02363	9.19e-99	accB	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PHCCMDOK_02364	0.0	accC	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
PHCCMDOK_02365	8.13e-85	yqhY	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_02366	3.22e-85	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PHCCMDOK_02367	1.04e-270	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PHCCMDOK_02368	2.03e-47	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PHCCMDOK_02369	1.56e-199	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PHCCMDOK_02370	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PHCCMDOK_02371	6.11e-189	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	rRNA methylase
PHCCMDOK_02372	2.64e-103	argR	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
PHCCMDOK_02373	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
PHCCMDOK_02374	1.71e-300	spoIVB	3.4.21.116	-	M	ko:K06399	-	ko00000,ko01000,ko01002	Stage IV sporulation protein B
PHCCMDOK_02375	4.46e-183	spo0A	-	-	KT	ko:K07699	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process
PHCCMDOK_02376	6.24e-140	-	-	-	M	-	-	-	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PHCCMDOK_02377	5.51e-47	yqzF	-	-	S	-	-	-	Protein of unknown function (DUF2627)
PHCCMDOK_02378	0.0	bkdR	-	-	KT	-	-	-	Transcriptional regulator
PHCCMDOK_02379	8.44e-262	ldh	1.4.1.9	-	E	ko:K00263	ko00280,ko00290,ko01100,ko01110,ko01130,map00280,map00290,map01100,map01110,map01130	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
PHCCMDOK_02380	0.0	bfmBC	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
PHCCMDOK_02381	2.83e-237	bfmBAA	1.2.4.4	-	C	ko:K00166	ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130	br01601,ko00000,ko00001,ko00002,ko01000	COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
PHCCMDOK_02382	2.22e-231	bfmBAB	1.2.4.4	-	C	ko:K00167,ko:K21417	ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130	br01601,ko00000,ko00001,ko00002,ko01000	COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
PHCCMDOK_02383	5.09e-283	bkdB	2.3.1.12, 2.3.1.168	-	C	ko:K00627,ko:K09699	ko00010,ko00020,ko00280,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00280,map00620,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PHCCMDOK_02384	2.39e-98	yqiW	-	-	S	-	-	-	Belongs to the UPF0403 family
PHCCMDOK_02385	6.1e-227	XK27_09655	-	-	S	-	-	-	Virulence protein RhuM family
PHCCMDOK_02386	0.0	-	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	Type I restriction-modification system
PHCCMDOK_02387	8.97e-96	-	-	-	V	-	-	-	type I restriction modification DNA specificity domain
PHCCMDOK_02388	8.6e-154	-	-	-	-	-	-	-	-
PHCCMDOK_02389	5.68e-41	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PHCCMDOK_02390	3.9e-152	spoIVCA	-	-	L	ko:K06400	-	ko00000	COG1961 Site-specific recombinases, DNA invertase Pin homologs
PHCCMDOK_02391	1.43e-105	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PHCCMDOK_02392	8.9e-271	yyxA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PHCCMDOK_02393	1.9e-189	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I
PHCCMDOK_02394	5.12e-211	yycI	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_02395	3.42e-314	yycH	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_02396	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHCCMDOK_02397	2.06e-170	yycF	-	-	T	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PHCCMDOK_02403	2.72e-315	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PHCCMDOK_02404	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
PHCCMDOK_02405	2.34e-87	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	binds to the 23S rRNA
PHCCMDOK_02406	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
PHCCMDOK_02407	2.06e-186	yybS	-	-	S	-	-	-	membrane
PHCCMDOK_02408	4.32e-48	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PHCCMDOK_02409	4.66e-89	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PHCCMDOK_02410	3.39e-60	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
PHCCMDOK_02411	2.81e-246	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PHCCMDOK_02412	1.19e-37	yyzM	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_02413	1.18e-229	yyaD	-	-	S	-	-	-	Membrane
PHCCMDOK_02414	4.88e-147	yyaC	-	-	S	-	-	-	Sporulation protein YyaC
PHCCMDOK_02415	4.44e-273	-	-	-	E	-	-	-	Aminotransferase class-V
PHCCMDOK_02416	1.01e-192	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
PHCCMDOK_02417	3.38e-173	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	COG1192 ATPases involved in chromosome partitioning
PHCCMDOK_02418	1.49e-191	noc	-	-	D	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division and chromosome segregation by preventing the formation of the Z ring through the nucleoid, which would cause chromosome breakage
PHCCMDOK_02419	2.39e-165	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of guanine in position 535 of 16S rRNA
PHCCMDOK_02420	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PHCCMDOK_02421	1.99e-314	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PHCCMDOK_02422	9.02e-141	jag	-	-	S	ko:K06346	-	ko00000	single-stranded nucleic acid binding R3H
PHCCMDOK_02423	8.72e-178	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PHCCMDOK_02424	2.54e-72	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PHCCMDOK_02425	3.58e-22	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
PHCCMDOK_02426	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PHCCMDOK_02427	3.45e-264	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PHCCMDOK_02428	1.15e-43	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain
PHCCMDOK_02429	2.58e-255	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PHCCMDOK_02430	9.83e-12	yqbO1	-	-	S	-	-	-	Domain of unknown function (DUF370)
PHCCMDOK_02431	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PHCCMDOK_02432	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PHCCMDOK_02433	3.7e-234	-	-	-	IQ	-	-	-	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PHCCMDOK_02434	3.67e-123	bcrC	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Bacitracin ABC transporter permease
PHCCMDOK_02435	2.85e-88	-	-	-	-	-	-	-	-
PHCCMDOK_02436	1.57e-147	-	-	-	-	-	-	-	-
PHCCMDOK_02437	0.0	-	-	-	-	-	-	-	-
PHCCMDOK_02438	6.79e-68	-	-	-	-	-	-	-	-
PHCCMDOK_02439	1.26e-243	uxuA	4.2.1.8	-	G	ko:K01686	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	mannonate dehydratase activity
PHCCMDOK_02440	6.14e-235	-	-	-	S	-	-	-	Tripartite tricarboxylate transporter family receptor
PHCCMDOK_02441	0.0	-	-	-	S	ko:K07793	ko02020,map02020	ko00000,ko00001,ko02000	Tripartite tricarboxylate transporter TctA family
PHCCMDOK_02442	1.48e-103	-	-	-	S	-	-	-	Tripartite tricarboxylate transporter TctB family
PHCCMDOK_02443	0.0	ycbD	-	-	C	ko:K22187	ko00040,map00040	ko00000,ko00001,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PHCCMDOK_02444	7.61e-217	ycbC	4.2.1.41	-	EM	ko:K01707	ko00053,ko01100,map00053,map01100	ko00000,ko00001,ko01000	5-dehydro-4-deoxyglucarate dehydratase activity
PHCCMDOK_02445	4.09e-154	ycbG	-	-	K	ko:K05799	-	ko00000,ko03000	FCD
PHCCMDOK_02446	3.89e-147	-	-	-	K	ko:K05799	-	ko00000,ko03000	FCD
PHCCMDOK_02447	6.79e-257	yycB1	-	-	P	ko:K03449	-	ko00000,ko02000	COG2807 Cyanate permease
PHCCMDOK_02448	4.14e-81	-	-	-	F	-	-	-	Cytidine and deoxycytidylate deaminase zinc-binding region
PHCCMDOK_02449	9.96e-95	-	-	-	K	-	-	-	Transcriptional regulator
PHCCMDOK_02450	3.46e-184	-	3.4.16.4	-	V	ko:K01286	-	ko00000,ko01000	Beta-lactamase
PHCCMDOK_02451	8.46e-160	yybG	-	-	S	-	-	-	Pentapeptide repeat-containing protein
PHCCMDOK_02452	1.76e-58	ydhM	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHCCMDOK_02453	7.19e-300	celB	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PHCCMDOK_02454	2.1e-63	celC	2.7.1.196, 2.7.1.205, 2.7.1.207	-	G	ko:K02759,ko:K02786	ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHCCMDOK_02455	0.0	gmuD	3.2.1.21, 3.2.1.86	GT1	G	ko:K01223,ko:K05350	ko00010,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PHCCMDOK_02456	0.0	licR	-	-	GKT	ko:K03491	-	ko00000,ko03000	Mga helix-turn-helix domain
PHCCMDOK_02457	7.01e-78	-	-	-	K	-	-	-	TetR family transcriptional regulator
PHCCMDOK_02458	2.94e-135	-	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
PHCCMDOK_02459	8.55e-104	-	-	-	K	-	-	-	Bacterial transcription activator, effector binding domain
PHCCMDOK_02460	1.74e-110	-	-	-	-	-	-	-	-
PHCCMDOK_02461	8.17e-265	-	3.2.1.21, 3.2.1.86	GT1	G	ko:K01223,ko:K05350	ko00010,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Glycosyl hydrolase family 1
PHCCMDOK_02462	0.0	-	3.2.1.24	GH38	G	ko:K01191	ko00511,map00511	ko00000,ko00001,ko01000,ko04131	Alpha mannosidase, middle domain
PHCCMDOK_02463	1.25e-231	-	3.2.1.96	-	G	ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	Glycosyl hydrolase family 85
PHCCMDOK_02464	9.55e-313	-	2.3.1.204, 3.2.1.24	GH38	G	ko:K01191,ko:K16869	ko00511,map00511	ko00000,ko00001,ko01000,ko04131	Alpha mannosidase, middle domain
PHCCMDOK_02465	5.68e-236	-	-	-	S	ko:K09704	-	ko00000	Glycosyl hydrolase
PHCCMDOK_02466	2.93e-13	-	-	-	S	-	-	-	Protein of unknown function, DUF624
PHCCMDOK_02467	6.62e-149	-	-	-	T	-	-	-	Histidine kinase
PHCCMDOK_02468	6.16e-124	-	-	-	T	ko:K07720	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
PHCCMDOK_02469	1.36e-171	-	-	-	G	ko:K17319	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_02470	4.62e-170	ytcP	-	-	G	ko:K17320	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_02471	1.86e-256	ypcG	-	-	G	ko:K17318	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PHCCMDOK_02472	3.35e-89	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
PHCCMDOK_02473	6.51e-179	-	-	-	P	-	-	-	COG0861 Membrane protein TerC, possibly involved in tellurium resistance
PHCCMDOK_02474	2.87e-216	yfhM	3.8.1.5	-	S	ko:K01563	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Alpha beta hydrolase
PHCCMDOK_02475	1.04e-284	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PHCCMDOK_02477	3.78e-252	aprE	3.4.21.62	-	O	ko:K01342	ko02024,map02024	ko00000,ko00001,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
PHCCMDOK_02478	1.29e-297	-	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix XRE-family like proteins
PHCCMDOK_02479	7.23e-135	cwlK	-	-	M	ko:K17733	-	ko00000,ko01000,ko01002,ko01011	Peptidase M15B and M15C DD-carboxypeptidase VanY endolysin
PHCCMDOK_02480	1.89e-315	-	-	-	E	ko:K03294,ko:K14052	-	ko00000,ko02000	Amino acid permease
PHCCMDOK_02481	9.9e-202	sseA	2.8.1.1, 2.8.1.2	-	P	ko:K01011	ko00270,ko00920,ko01100,ko01120,ko04122,map00270,map00920,map01100,map01120,map04122	ko00000,ko00001,ko01000	sulfurtransferase
PHCCMDOK_02482	3.08e-283	yukF	-	-	QT	-	-	-	Transcriptional regulator
PHCCMDOK_02483	1.31e-249	ald	1.4.1.1	-	E	ko:K00259	ko00250,ko00430,ko01100,map00250,map00430,map01100	ko00000,ko00001,ko01000	Belongs to the AlaDH PNT family
PHCCMDOK_02484	1.55e-253	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	6-phosphogluconolactonase
PHCCMDOK_02485	5.77e-194	rarD	-	-	S	ko:K05786	-	ko00000,ko02000	-transporter
PHCCMDOK_02486	5.9e-193	dppA	-	-	E	ko:K16203	-	ko00000,ko01000,ko01002	D-aminopeptidase
PHCCMDOK_02487	6.65e-207	dppB	-	-	P	ko:K16200	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PHCCMDOK_02488	3.36e-219	dppC	-	-	EP	ko:K16201	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PHCCMDOK_02489	1.5e-231	dppD	-	-	P	ko:K02031,ko:K16202	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHCCMDOK_02490	0.0	dppE	-	-	E	ko:K16199	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PHCCMDOK_02491	2.19e-219	ykfA	3.4.17.13	-	V	ko:K01297	-	ko00000,ko01000,ko01002,ko01011	proteins, homologs of microcin C7 resistance protein MccF
PHCCMDOK_02492	3.2e-211	ykfC	3.4.14.13	-	M	ko:K20742	-	ko00000,ko01000,ko01002	COG0791 Cell wall-associated hydrolases (invasion-associated proteins)
PHCCMDOK_02493	1.89e-230	ykfD	-	-	E	ko:K02032,ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHCCMDOK_02494	9.78e-78	hxlR	-	-	K	-	-	-	transcriptional
PHCCMDOK_02495	9.96e-141	XK27_02070	-	-	S	ko:K07078	-	ko00000	Nitroreductase family
PHCCMDOK_02496	1.77e-167	-	-	-	T	-	-	-	Universal stress protein family
PHCCMDOK_02497	0.0	mrpA	-	-	CP	ko:K05565	-	ko00000,ko02000	COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit
PHCCMDOK_02498	5.43e-85	mnhB2	-	-	P	ko:K05566	-	ko00000,ko02000	antiporter activity
PHCCMDOK_02499	1.85e-66	mnhC	-	-	P	ko:K05567	-	ko00000,ko02000	Subunit C of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PHCCMDOK_02500	0.0	mrpD	-	-	CP	ko:K05568	-	ko00000,ko02000	Subunit D of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PHCCMDOK_02501	8.09e-111	mnhE2	-	-	P	ko:K05569	-	ko00000,ko02000	Na+/H+ ion antiporter subunit
PHCCMDOK_02502	2.23e-51	mnhF2	-	-	P	ko:K05570	-	ko00000,ko02000	Subunit F of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PHCCMDOK_02503	2.2e-77	-	-	-	P	ko:K05571	-	ko00000,ko02000	COG1320 Multisubunit Na H antiporter, MnhG subunit
PHCCMDOK_02504	2.62e-201	-	-	-	S	-	-	-	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
PHCCMDOK_02505	1.21e-246	-	-	-	G	-	-	-	Xylose isomerase
PHCCMDOK_02506	3.47e-244	-	-	-	S	-	-	-	Oxidoreductase family, C-terminal alpha/beta domain
PHCCMDOK_02507	5.44e-176	-	-	-	G	-	-	-	Xylose isomerase-like TIM barrel
PHCCMDOK_02508	4.26e-271	-	-	-	S	ko:K09927	-	ko00000	Winged helix DNA-binding domain
PHCCMDOK_02509	8e-137	-	-	-	S	-	-	-	Integral membrane protein
PHCCMDOK_02510	1.01e-62	-	-	-	-	-	-	-	-
PHCCMDOK_02511	1.44e-177	yodJ	3.4.17.14	-	M	ko:K07260	ko00550,ko01100,ko01502,ko02020,map00550,map01100,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	D-alanyl-D-alanine carboxypeptidase
PHCCMDOK_02512	0.0	yqgS	2.7.8.20	-	M	ko:K01138,ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Belongs to the LTA synthase family
PHCCMDOK_02513	3.34e-131	-	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PHCCMDOK_02514	6.53e-171	ydcA	-	-	S	-	-	-	membrane protein (homolog of Drosophila rhomboid)
PHCCMDOK_02515	9.81e-77	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PHCCMDOK_02516	1.7e-237	ydcC	-	-	M	-	-	-	COG2834 Outer membrane lipoprotein-sorting protein
PHCCMDOK_02517	1.56e-252	pamO	-	-	P	ko:K07222	-	ko00000	Flavin-binding monooxygenase-like
PHCCMDOK_02518	0.0	scrA5	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHCCMDOK_02519	0.0	bglC1	3.2.1.21, 3.2.1.52	GH3	G	ko:K01207,ko:K05349	ko00460,ko00500,ko00520,ko00531,ko00940,ko01100,ko01110,ko01501,map00460,map00500,map00520,map00531,map00940,map01100,map01110,map01501	ko00000,ko00001,ko00002,ko01000	Belongs to the glycosyl hydrolase 3 family
PHCCMDOK_02520	0.0	sacA	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
PHCCMDOK_02521	4.85e-193	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PHCCMDOK_02522	1.79e-117	-	-	-	S	-	-	-	MepB protein
PHCCMDOK_02523	1.52e-212	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PHCCMDOK_02524	3.08e-164	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PHCCMDOK_02525	1.81e-80	yhcF	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator
PHCCMDOK_02526	2.98e-152	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PHCCMDOK_02527	7.25e-145	-	-	-	-	-	-	-	-
PHCCMDOK_02528	4.42e-249	yhfE	-	-	G	-	-	-	peptidase M42
PHCCMDOK_02529	1.51e-104	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
PHCCMDOK_02530	2.47e-125	yhzB	-	-	S	-	-	-	B3/4 domain
PHCCMDOK_02531	4.83e-277	queG	1.17.99.6	-	C	ko:K18979	-	ko00000,ko01000,ko03016	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PHCCMDOK_02532	2.23e-119	ogt	2.1.1.63	-	L	ko:K00567	-	ko00000,ko01000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PHCCMDOK_02533	6.92e-101	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PHCCMDOK_02534	9.22e-213	yhbB	-	-	S	-	-	-	Putative amidase domain
PHCCMDOK_02535	7.16e-114	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PHCCMDOK_02536	2.08e-113	yufK	-	-	S	-	-	-	Family of unknown function (DUF5366)
PHCCMDOK_02537	2.27e-69	-	1.14.99.48	-	S	ko:K07145	ko00860,ko01110,map00860,map01110	ko00000,ko00001,ko01000	Antibiotic biosynthesis monooxygenase
PHCCMDOK_02538	0.0	pbpD	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555,ko:K18770	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	Penicillin-binding Protein
PHCCMDOK_02539	0.0	prkA	-	-	T	ko:K07180	-	ko00000	Ser protein kinase
PHCCMDOK_02540	1.49e-110	spsB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PHCCMDOK_02541	4.26e-131	spsB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PHCCMDOK_02542	4.66e-177	cysA1	-	-	S	-	-	-	AAA domain
PHCCMDOK_02543	4.51e-281	yhbH	-	-	S	ko:K09786	-	ko00000	Belongs to the UPF0229 family
PHCCMDOK_02546	1.05e-189	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PHCCMDOK_02547	0.0	-	-	-	EGP	-	-	-	the major facilitator superfamily
PHCCMDOK_02548	6.26e-222	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	COG1131 ABC-type multidrug transport system, ATPase component
PHCCMDOK_02549	6.07e-189	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	Transport permease protein
PHCCMDOK_02550	5.02e-105	-	-	-	S	-	-	-	Protein of unknown function (DUF664)
PHCCMDOK_02551	0.0	-	-	-	G	ko:K10297	-	ko00000,ko04121	Right handed beta helix region
PHCCMDOK_02552	1.3e-204	ydaD	-	-	IQ	-	-	-	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PHCCMDOK_02553	0.0	-	-	-	E	ko:K03307	-	ko00000	Sodium:solute symporter family
PHCCMDOK_02554	2.21e-164	-	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
PHCCMDOK_02555	0.0	argH	4.3.2.1	-	E	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	argininosuccinate lyase
PHCCMDOK_02556	1.33e-168	yvoA	-	-	K	ko:K03710	-	ko00000,ko03000	transcriptional
PHCCMDOK_02557	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PHCCMDOK_02558	3.12e-104	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
PHCCMDOK_02559	3.22e-119	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PHCCMDOK_02560	5.49e-83	pbuO_1	-	-	S	ko:K06901	-	ko00000,ko02000	permease
PHCCMDOK_02561	1.5e-24	pbuO_1	-	-	S	ko:K06901	-	ko00000,ko02000	Permease
PHCCMDOK_02562	3.56e-213	-	-	-	F	-	-	-	GHKL domain
PHCCMDOK_02563	1.84e-214	yqjA	-	-	S	-	-	-	Putative aromatic acid exporter C-terminal domain
PHCCMDOK_02564	5.96e-122	yqjB	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_02566	7.81e-88	mce	5.1.99.1	-	E	ko:K05606	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	COG0346 Lactoylglutathione lyase and related lyases
PHCCMDOK_02567	1.86e-247	yqjE	3.4.11.14, 3.4.11.4	-	E	ko:K01258,ko:K01263	-	ko00000,ko01000,ko01002	COG2195 Di- and tripeptidases
PHCCMDOK_02568	1.1e-120	-	3.5.1.104	-	G	ko:K22278	-	ko00000,ko01000	Polysaccharide deacetylase
PHCCMDOK_02570	1.95e-89	yaaR	-	-	S	ko:K09770	-	ko00000	protein conserved in bacteria
PHCCMDOK_02571	4.89e-102	-	-	-	S	-	-	-	Pfam Polyketide cyclase dehydrase and lipid transport
PHCCMDOK_02572	7.08e-96	ykuL	-	-	S	-	-	-	CBS domain
PHCCMDOK_02573	1.01e-55	-	-	-	-	-	-	-	-
PHCCMDOK_02574	0.0	apr	-	-	O	-	-	-	Belongs to the peptidase S8 family
PHCCMDOK_02575	1.31e-176	yibQ	-	-	S	ko:K09798	-	ko00000	protein conserved in bacteria
PHCCMDOK_02576	3.57e-62	tnrA	-	-	K	-	-	-	transcriptional
PHCCMDOK_02577	3.09e-66	-	-	-	-	-	-	-	-
PHCCMDOK_02579	4.16e-313	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
PHCCMDOK_02580	5.04e-162	-	-	-	P	ko:K08714	-	ko00000,ko02000	Polycystin cation channel
PHCCMDOK_02581	1.4e-180	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PHCCMDOK_02582	3.61e-286	proA	1.2.1.41	-	E	ko:K00147	ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PHCCMDOK_02583	1.63e-258	proB	2.7.2.11	-	E	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PHCCMDOK_02584	0.0	asnO	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
PHCCMDOK_02585	2.68e-233	cah	3.1.1.41	-	Q	ko:K01060	ko00311,ko01130,map00311,map01130	ko00000,ko00001,ko01000	Acetyl xylan esterase (AXE1)
PHCCMDOK_02586	1.24e-106	-	-	-	V	-	-	-	COG4767 Glycopeptide antibiotics resistance protein
PHCCMDOK_02587	1.48e-69	ogt	-	-	L	ko:K07443	-	ko00000	Methyltransferase
PHCCMDOK_02588	6.86e-126	yvbF	-	-	K	ko:K22301	-	ko00000,ko03000	Belongs to the GbsR family
PHCCMDOK_02589	6.73e-107	ypqE	-	-	G	ko:K02777	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	COG2190 Phosphotransferase system IIA components
PHCCMDOK_02590	1.04e-118	-	-	-	S	-	-	-	UPF0316 protein
PHCCMDOK_02591	2.75e-267	mtnW	5.3.2.5	-	G	ko:K08965	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the enolization of 2,3-diketo-5- methylthiopentyl-1-phosphate (DK-MTP-1-P) into 2-hydroxy-3-keto-5- methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P)
PHCCMDOK_02592	1.47e-179	uppP	3.6.1.27	-	V	ko:K06153	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PHCCMDOK_02593	2.65e-105	-	-	-	CO	-	-	-	Thioredoxin-like
PHCCMDOK_02595	3.24e-114	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	Belongs to the Nudix hydrolase family
PHCCMDOK_02596	4.81e-140	spoIIM	-	-	S	ko:K06384	-	ko00000	Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane
PHCCMDOK_02597	8.92e-111	fur	-	-	P	ko:K03711	-	ko00000,ko03000	Belongs to the Fur family
PHCCMDOK_02598	8.77e-19	-	-	-	S	-	-	-	Protein of unknown function (DUF4227)
PHCCMDOK_02599	5.76e-212	xerD	-	-	L	ko:K04763	-	ko00000,ko03036	recombinase XerD
PHCCMDOK_02600	4.72e-285	deoB	5.4.2.7	-	G	ko:K01839	ko00030,ko00230,map00030,map00230	ko00000,ko00001,ko01000	Phosphotransfer between the C1 and C5 carbon atoms of pentose
PHCCMDOK_02601	2.38e-292	pdp	2.4.2.2	-	F	ko:K00756	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	phosphorylase
PHCCMDOK_02602	4.19e-92	ohrB	-	-	O	-	-	-	Organic hydroperoxide resistance protein
PHCCMDOK_02603	6.17e-153	-	-	-	J	-	-	-	translation release factor activity
PHCCMDOK_02604	2.08e-302	ycnB	-	-	EGP	-	-	-	the major facilitator superfamily
PHCCMDOK_02605	3.18e-29	yycD	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2188)
PHCCMDOK_02606	1.55e-67	-	-	-	-	-	-	-	-
PHCCMDOK_02607	1.28e-107	yvsG	-	-	S	ko:K07038	-	ko00000	LexA-binding, inner membrane-associated putative hydrolase
PHCCMDOK_02608	6.94e-167	-	3.5.1.104	-	G	ko:K22278	-	ko00000,ko01000	Polysaccharide deacetylase
PHCCMDOK_02609	7.13e-110	-	-	-	L	-	-	-	phage terminase small subunit
PHCCMDOK_02610	0.0	-	-	-	S	-	-	-	Terminase
PHCCMDOK_02611	5.39e-35	-	-	-	-	-	-	-	-
PHCCMDOK_02612	7.1e-277	-	-	-	S	-	-	-	Phage portal protein
PHCCMDOK_02613	1.7e-122	-	-	-	S	ko:K06904	-	ko00000	Caudovirus prohead serine protease
PHCCMDOK_02614	6.81e-291	-	-	-	S	-	-	-	capsid protein
PHCCMDOK_02615	2.65e-79	-	-	-	N	-	-	-	Bacterial Ig-like domain 2
PHCCMDOK_02616	6.47e-64	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
PHCCMDOK_02617	5.64e-75	-	-	-	S	-	-	-	Phage head-tail joining protein
PHCCMDOK_02618	5.58e-15	-	-	-	S	-	-	-	TIGRFAM phage protein, HK97 gp10 family
PHCCMDOK_02619	2.25e-72	-	-	-	-	-	-	-	-
PHCCMDOK_02620	5.98e-142	-	-	-	N	-	-	-	phage major tail protein, phi13 family
PHCCMDOK_02623	0.0	-	-	-	D	-	-	-	phage tail tape measure protein
PHCCMDOK_02624	7.03e-192	-	-	-	S	-	-	-	Phage tail protein
PHCCMDOK_02625	0.0	-	-	-	M	-	-	-	Peptidase_G2, IMC autoproteolytic cleavage domain
PHCCMDOK_02626	0.0	-	-	-	-	-	-	-	-
PHCCMDOK_02630	1.09e-298	-	-	-	L	-	-	-	Prophage endopeptidase tail
PHCCMDOK_02631	1.15e-82	-	-	-	S	-	-	-	Bacteriophage holin family
PHCCMDOK_02632	1.28e-123	-	3.5.1.28	-	V	ko:K01447	-	ko00000,ko01000	N-acetylmuramoyl-L-alanine amidase
PHCCMDOK_02635	8e-175	ligB	6.5.1.1, 6.5.1.6, 6.5.1.7	-	L	ko:K01971,ko:K10747	ko03030,ko03410,ko03420,ko03430,ko03450,map03030,map03410,map03420,map03430,map03450	ko00000,ko00001,ko01000,ko03032,ko03400	ATP-dependent DNA ligase
PHCCMDOK_02636	1e-51	yqiX	-	-	S	-	-	-	YolD-like protein
PHCCMDOK_02637	8.52e-29	-	-	-	-	-	-	-	-
PHCCMDOK_02640	4.22e-109	-	-	-	E	-	-	-	Zn peptidase
PHCCMDOK_02641	5.88e-61	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PHCCMDOK_02642	2.48e-30	-	-	-	-	-	-	-	-
PHCCMDOK_02643	5.19e-18	-	-	-	-	-	-	-	-
PHCCMDOK_02645	3.34e-81	-	-	-	S	ko:K07741	-	ko00000	Phage regulatory protein Rha (Phage_pRha)
PHCCMDOK_02647	3.24e-60	-	-	-	-	-	-	-	-
PHCCMDOK_02649	1.85e-26	-	-	-	-	-	-	-	-
PHCCMDOK_02650	6.2e-109	-	-	-	S	-	-	-	Bacteriophage Mu Gam like protein
PHCCMDOK_02651	2.33e-212	-	-	-	D	-	-	-	AAA domain
PHCCMDOK_02652	2.67e-101	-	-	-	S	-	-	-	Protein of unknown function (DUF669)
PHCCMDOK_02653	0.0	-	-	-	S	ko:K06919	-	ko00000	D5 N terminal like
PHCCMDOK_02654	7.84e-80	-	-	-	-	-	-	-	-
PHCCMDOK_02655	5.47e-125	-	-	-	L	-	-	-	ERCC4 domain
PHCCMDOK_02656	5.13e-30	-	-	-	-	-	-	-	-
PHCCMDOK_02657	6.41e-49	-	-	-	S	-	-	-	Protein of unknwon function (DUF3310)
PHCCMDOK_02659	2.87e-88	-	-	-	Q	-	-	-	DNA (cytosine-5-)-methyltransferase activity
PHCCMDOK_02663	3.65e-68	-	-	-	S	-	-	-	dUTPase
PHCCMDOK_02664	4.13e-35	-	-	-	-	-	-	-	-
PHCCMDOK_02665	1.09e-95	-	-	-	S	-	-	-	Transcriptional regulator
PHCCMDOK_02667	7.1e-177	-	-	-	K	-	-	-	TipAS antibiotic-recognition domain
PHCCMDOK_02668	2.28e-219	-	-	-	O	-	-	-	Predicted Zn-dependent protease (DUF2268)
PHCCMDOK_02669	1.58e-133	-	-	-	K	-	-	-	GrpB protein
PHCCMDOK_02670	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PHCCMDOK_02671	1.65e-97	-	-	-	L	-	-	-	Bacterial transcription activator, effector binding domain
PHCCMDOK_02672	6.43e-146	-	-	-	-	-	-	-	-
PHCCMDOK_02673	2.64e-151	-	-	-	-	-	-	-	-
PHCCMDOK_02674	0.0	-	-	-	-	-	-	-	-
PHCCMDOK_02675	1.34e-86	-	-	-	-	-	-	-	-
PHCCMDOK_02676	3.09e-88	-	-	-	-	-	-	-	-
PHCCMDOK_02677	6.13e-176	-	-	-	S	-	-	-	GNAT acetyltransferase
PHCCMDOK_02678	8.55e-251	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PHCCMDOK_02680	0.0	-	-	-	T	-	-	-	Histidine kinase
PHCCMDOK_02682	0.0	-	-	-	-	-	-	-	-
PHCCMDOK_02683	1.14e-150	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
PHCCMDOK_02684	0.0	sdcS	-	-	P	ko:K14445	-	ko00000,ko02000	Sodium:sulfate symporter transmembrane region
PHCCMDOK_02685	2.45e-163	dcuR	-	-	T	ko:K02475,ko:K11615	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG4565 Response regulator of citrate malate metabolism
PHCCMDOK_02686	0.0	-	2.7.13.3	-	T	ko:K02476,ko:K11614,ko:K11637	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Signal transduction histidine kinase regulating citrate malate metabolism
PHCCMDOK_02687	1.84e-147	M1-740	-	-	I	-	-	-	COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes
PHCCMDOK_02688	2.24e-211	-	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	nucleoside hydrolase
PHCCMDOK_02689	7.81e-78	-	-	-	S	-	-	-	CHY zinc finger
PHCCMDOK_02690	8.87e-288	brnQ	-	-	E	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
PHCCMDOK_02694	4.99e-37	sdpI	-	-	S	-	-	-	integral membrane protein
PHCCMDOK_02695	9.69e-275	-	-	-	EGP	-	-	-	Transmembrane secretion effector
PHCCMDOK_02696	4.23e-125	-	-	-	S	ko:K09962	-	ko00000	protein conserved in bacteria
PHCCMDOK_02697	2.83e-67	-	-	-	L	-	-	-	COG3316 Transposase and inactivated derivatives
PHCCMDOK_02698	4.19e-149	-	-	-	G	-	-	-	PFAM TRAP C4-dicarboxylate transport system permease DctM subunit
PHCCMDOK_02699	6.05e-17	-	-	-	G	-	-	-	Tripartite ATP-independent periplasmic transporters, DctQ component
PHCCMDOK_02700	5.21e-107	-	-	-	G	-	-	-	Bacterial extracellular solute-binding protein, family 7
PHCCMDOK_02701	1.56e-193	bbsF_2	2.8.3.16	-	C	ko:K07749	-	ko00000,ko01000	acyl-CoA transferases carnitine dehydratase
PHCCMDOK_02702	2.18e-77	-	4.1.3.4	-	H	ko:K01640	ko00072,ko00280,ko00281,ko00650,ko01100,ko04146,map00072,map00280,map00281,map00650,map01100,map04146	ko00000,ko00001,ko00002,ko01000	PFAM pyruvate carboxyltransferase
PHCCMDOK_02703	5.49e-102	ykuN	-	-	C	ko:K03839	-	ko00000	Flavodoxin
PHCCMDOK_02704	1.26e-213	dagK	2.7.1.107	-	I	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
PHCCMDOK_02705	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PHCCMDOK_02706	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PHCCMDOK_02707	3.39e-60	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PHCCMDOK_02708	2.89e-115	yizA	-	-	S	-	-	-	DinB family
PHCCMDOK_02709	4.95e-221	-	-	-	-	-	-	-	-
PHCCMDOK_02711	7.13e-207	yufQ	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PHCCMDOK_02712	1.52e-241	yufP	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PHCCMDOK_02713	0.0	yufO	3.6.3.17	-	S	ko:K02056	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PHCCMDOK_02714	1.29e-260	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC-type transport system, periplasmic component surface lipoprotein
PHCCMDOK_02715	2.82e-281	camS	-	-	S	-	-	-	COG4851 Protein involved in sex pheromone biosynthesis
PHCCMDOK_02716	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PHCCMDOK_02717	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
PHCCMDOK_02718	8.05e-166	pcrB	-	-	I	ko:K07094	-	ko00000,ko01000	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
PHCCMDOK_02720	1.02e-194	fhuC	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
PHCCMDOK_02721	1.45e-216	fhuG	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PHCCMDOK_02722	6.69e-224	fhuB	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PHCCMDOK_02724	5.18e-34	mepA	-	-	V	-	-	-	MATE efflux family protein
PHCCMDOK_02725	1.16e-209	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
PHCCMDOK_02726	0.0	acyII	3.5.1.11	-	S	ko:K01434	ko00311,ko01130,map00311,map01130	ko00000,ko00001,ko01000,ko01002	Penicillin amidase
PHCCMDOK_02727	0.0	ade	3.5.4.2	-	F	ko:K01486	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
PHCCMDOK_02728	1.55e-66	yerC	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_02729	0.0	yerA	3.5.4.2	-	F	ko:K01486	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	adenine deaminase
PHCCMDOK_02730	1.17e-249	cfr	2.1.1.224	-	J	ko:K15632	-	ko00000,ko01000,ko01504,ko03009	Specifically methylates position 8 of adenine 2503 in 23S rRNA. Confers resistance to some classes of antibiotics
PHCCMDOK_02731	3.98e-205	opuAC	-	-	E	ko:K02001,ko:K02002	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	glycine betaine
PHCCMDOK_02732	4.62e-188	gbuB	-	-	P	ko:K02001,ko:K02002	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	glycine betaine
PHCCMDOK_02733	5.92e-280	gbuA	3.6.3.32	-	E	ko:K02000	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	glycine betaine
PHCCMDOK_02734	2.59e-123	-	-	-	K	ko:K22301	-	ko00000,ko03000	Belongs to the GbsR family
PHCCMDOK_02736	2.94e-31	-	-	-	-	-	-	-	-
PHCCMDOK_02738	1.62e-257	yheB	-	-	S	-	-	-	Belongs to the UPF0754 family
PHCCMDOK_02739	2.8e-72	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
PHCCMDOK_02740	1.96e-199	yhaX	-	-	S	-	-	-	hydrolases of the HAD superfamily
PHCCMDOK_02742	9.93e-65	-	-	-	-	-	-	-	-
PHCCMDOK_02743	2.7e-161	cssR	-	-	T	ko:K07770	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PHCCMDOK_02744	0.0	cssS	2.7.13.3	-	T	ko:K07650	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHCCMDOK_02745	4.85e-231	yhaM	-	-	L	ko:K03698	-	ko00000,ko01000,ko03019	Shows a 3'-5' exoribonuclease activity
PHCCMDOK_02746	1.88e-56	yhaL	-	-	S	-	-	-	Sporulation protein YhaL
PHCCMDOK_02747	5.14e-212	prsA	5.2.1.8	-	M	ko:K01802,ko:K07533	-	ko00000,ko01000,ko03110	plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PHCCMDOK_02748	1.23e-06	-	-	-	S	-	-	-	Protein of unknown function (Tiny_TM_bacill)
PHCCMDOK_02749	5.87e-132	-	-	-	S	-	-	-	Protein conserved in bacteria
PHCCMDOK_02750	1.67e-140	hpr	-	-	K	ko:K09682	-	ko00000,ko03000	Negative regulator of protease production and sporulation
PHCCMDOK_02751	4.12e-65	yhaH	-	-	D	-	-	-	gas vesicle protein
PHCCMDOK_02752	1.58e-261	serC	2.6.1.52	-	E	ko:K00831	ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PHCCMDOK_02753	1.5e-96	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
PHCCMDOK_02754	1.34e-175	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	transporter (ATP-binding protein)
PHCCMDOK_02755	2.61e-280	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
PHCCMDOK_02756	1.23e-162	ecsC	-	-	S	-	-	-	EcsC protein family
PHCCMDOK_02757	1.85e-155	ccdA	-	-	O	ko:K06196	-	ko00000,ko02000	cytochrome c biogenesis protein
PHCCMDOK_02758	0.0	pbpF	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
PHCCMDOK_02759	2.21e-254	hemE	4.1.1.37	-	H	ko:K01599	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
PHCCMDOK_02760	1.9e-229	hemH	4.99.1.1, 4.99.1.9	-	H	ko:K01772	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the ferrous insertion into protoporphyrin IX
PHCCMDOK_02761	0.0	hemY	1.3.3.15, 1.3.3.4	-	H	ko:K00231	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
PHCCMDOK_02763	1.75e-129	spo0B	-	-	T	ko:K06375	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko01000	Sporulation initiation phospho-transferase B, C-terminal
PHCCMDOK_02764	5.62e-292	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PHCCMDOK_02765	3.91e-95	pheB	5.4.99.5	-	S	ko:K06209	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the UPF0735 family
PHCCMDOK_02766	3.72e-205	pheA	4.2.1.51	-	E	ko:K04518	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Prephenate dehydratase
PHCCMDOK_02767	9.2e-114	yrxA	-	-	S	ko:K07105	-	ko00000	small molecule binding protein (contains 3H domain)
PHCCMDOK_02768	8.13e-263	nifS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Cysteine desulfurase
PHCCMDOK_02769	0.0	nadB	1.4.3.16	-	H	ko:K00278	ko00250,ko00760,ko01100,map00250,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of L-aspartate to iminoaspartate
PHCCMDOK_02770	2.01e-184	nadC	2.4.2.19	-	H	ko:K00767	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NadC ModD family
PHCCMDOK_02771	3.87e-262	nadA	2.5.1.72	-	H	ko:K03517	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
PHCCMDOK_02772	4.49e-230	safA	-	-	M	ko:K06370	-	ko00000	spore coat assembly protein SafA
PHCCMDOK_02773	4.74e-25	-	-	-	S	-	-	-	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PHCCMDOK_02774	5.31e-82	-	1.9.3.1	-	C	ko:K02275	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	cytochrome c oxidase subunit II
PHCCMDOK_02775	2.61e-112	bofC	-	-	S	ko:K06318	-	ko00000	BofC C-terminal domain
PHCCMDOK_02776	1.58e-133	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PHCCMDOK_02777	2.6e-233	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PHCCMDOK_02778	1.03e-37	yrzS	-	-	S	-	-	-	Protein of unknown function (DUF2905)
PHCCMDOK_02779	1.78e-240	queA	2.4.99.17	-	J	ko:K07568	-	ko00000,ko01000,ko03016	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PHCCMDOK_02780	1.07e-289	tgt	2.4.2.29	-	F	ko:K00773	-	ko00000,ko01000,ko03016	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PHCCMDOK_02781	1.58e-50	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase subunit YajC
PHCCMDOK_02782	7.78e-76	yrzE	-	-	S	-	-	-	Protein of unknown function (DUF3792)
PHCCMDOK_02783	3.82e-94	-	-	-	S	-	-	-	membrane
PHCCMDOK_02784	7.4e-41	yodI	-	-	-	-	-	-	-
PHCCMDOK_02785	0.0	spoVB	-	-	S	ko:K06409	-	ko00000,ko02000	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PHCCMDOK_02786	9.5e-30	yrzD	-	-	S	-	-	-	Post-transcriptional regulator
PHCCMDOK_02787	1.5e-294	secD	-	-	U	ko:K03072,ko:K12257	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
PHCCMDOK_02788	1.1e-191	secF	-	-	U	ko:K03074,ko:K12257	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
PHCCMDOK_02789	5.69e-50	yrvD	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
PHCCMDOK_02790	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
PHCCMDOK_02791	1.64e-119	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PHCCMDOK_02792	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PHCCMDOK_02793	1.26e-95	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PHCCMDOK_02794	5.25e-234	-	-	-	K	-	-	-	LacI family transcriptional regulator
PHCCMDOK_02795	1.52e-183	thuA	-	-	G	-	-	-	Trehalose utilisation
PHCCMDOK_02796	1.94e-246	-	-	-	S	-	-	-	Oxidoreductase family, C-terminal alpha/beta domain
PHCCMDOK_02797	1.35e-255	ybbE	3.4.16.4	-	V	ko:K21469	ko00550,map00550	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the UPF0214 family
PHCCMDOK_02799	3.22e-306	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
PHCCMDOK_02800	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
PHCCMDOK_02801	8.64e-273	-	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
PHCCMDOK_02802	5.89e-66	-	-	-	-	-	-	-	-
PHCCMDOK_02803	1.67e-274	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Methionine synthase
PHCCMDOK_02804	2.48e-176	yrvM	-	-	H	ko:K22132	-	ko00000,ko03016	COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
PHCCMDOK_02805	7.73e-139	rsfA	-	-	S	ko:K06314	-	ko00000,ko03000	Transcriptional regulator
PHCCMDOK_02806	2.58e-293	rarA	-	-	L	ko:K07478	-	ko00000	COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase
PHCCMDOK_02807	8.4e-93	cymR	-	-	K	ko:K17472	-	ko00000,ko03000	Transcriptional regulator
PHCCMDOK_02808	1.04e-268	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Cysteine desulfurase
PHCCMDOK_02809	1.05e-275	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PHCCMDOK_02810	5.69e-81	yrrB	-	-	S	-	-	-	COG0457 FOG TPR repeat
PHCCMDOK_02811	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PHCCMDOK_02812	1.14e-105	yrrD	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_02813	1.11e-41	yrzR	-	-	-	-	-	-	-
PHCCMDOK_02814	3.8e-234	yrrI	-	-	S	-	-	-	AI-2E family transporter
PHCCMDOK_02815	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PHCCMDOK_02816	1.32e-57	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
PHCCMDOK_02817	1.28e-93	yrrK	-	-	L	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PHCCMDOK_02818	2.04e-43	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
PHCCMDOK_02819	2.35e-266	mltG	-	-	S	ko:K07082	-	ko00000	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PHCCMDOK_02820	3.15e-146	yrrM	2.1.1.104	-	S	ko:K00588	ko00360,ko00940,ko00941,ko00945,ko01100,ko01110,map00360,map00940,map00941,map00945,map01100,map01110	ko00000,ko00001,ko00002,ko01000	O-methyltransferase
PHCCMDOK_02821	4.67e-147	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Cytidine monophosphokinase
PHCCMDOK_02822	2.58e-103	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PHCCMDOK_02823	6.64e-17	yrrS	-	-	S	-	-	-	Protein of unknown function (DUF1510)
PHCCMDOK_02824	0.0	ligD	6.5.1.1	-	L	ko:K01971	ko03450,map03450	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA ligase
PHCCMDOK_02825	2.91e-191	ku	-	-	L	ko:K10979	ko03450,map03450	ko00000,ko00001,ko03400	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
PHCCMDOK_02826	2.39e-158	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PHCCMDOK_02828	1.03e-100	-	-	-	-	-	-	-	-
PHCCMDOK_02829	0.0	-	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
PHCCMDOK_02830	4.62e-187	-	-	-	P	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
PHCCMDOK_02831	1.43e-181	-	-	-	P	ko:K02031	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Oligopeptide/dipeptide transporter, C-terminal region
PHCCMDOK_02832	3.7e-204	-	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	N-terminal TM domain of oligopeptide transport permease C
PHCCMDOK_02833	9.56e-194	-	-	-	P	ko:K02033	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_02834	1.35e-136	arpR	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PHCCMDOK_02835	0.0	-	3.2.1.1	GH13	G	ko:K01176	ko00500,ko01100,ko04973,map00500,map01100,map04973	ko00000,ko00001,ko01000	Starch/carbohydrate-binding module (family 53)
PHCCMDOK_02836	7.24e-71	-	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PHCCMDOK_02837	4.16e-134	XK27_06885	-	-	L	-	-	-	COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes
PHCCMDOK_02838	5.5e-238	lplJ	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Lipoate-protein ligase
PHCCMDOK_02839	0.0	-	-	-	S	-	-	-	Membrane
PHCCMDOK_02840	5.49e-282	hipO3	-	-	S	ko:K12941,ko:K21613	-	ko00000,ko01000,ko01002	amidohydrolase
PHCCMDOK_02841	9.38e-209	ybaS	-	-	S	-	-	-	Na -dependent transporter
PHCCMDOK_02842	1.27e-159	sigK	-	-	K	ko:K03091	-	ko00000,ko03021	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PHCCMDOK_02843	2.85e-222	-	-	-	P	-	-	-	Transporter associated domain
PHCCMDOK_02844	2.24e-34	-	-	-	-	-	-	-	-
PHCCMDOK_02847	1.91e-69	-	-	-	-	-	-	-	-
PHCCMDOK_02848	1.35e-300	nasF	2.1.1.107, 4.2.1.75	-	H	ko:K13542	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the precorrin methyltransferase family
PHCCMDOK_02849	0.0	nasD	1.7.1.15	-	C	ko:K00362	ko00910,ko01120,map00910,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
PHCCMDOK_02850	5.08e-72	nirD	1.7.1.15	-	P	ko:K00363	ko00910,ko01120,map00910,map01120	ko00000,ko00001,ko00002,ko01000	Nitrite reductase
PHCCMDOK_02851	0.0	nirB	1.7.1.15	-	C	ko:K00362	ko00910,ko01120,map00910,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
PHCCMDOK_02852	0.0	nasC	-	-	C	ko:K00372	ko00910,ko01120,map00910,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PHCCMDOK_02853	1.84e-281	nasA	-	-	P	ko:K02575	ko00910,map00910	ko00000,ko00001,ko00002,ko02000	COG2223 Nitrate nitrite transporter
PHCCMDOK_02854	0.0	-	-	-	M	ko:K05020	-	ko00000,ko02000	Belongs to the BCCT transporter (TC 2.A.15) family
PHCCMDOK_02856	2.4e-191	thiD	2.5.1.3, 2.7.1.49, 2.7.4.7	-	H	ko:K00941,ko:K14153	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
PHCCMDOK_02857	5.78e-57	hbs	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PHCCMDOK_02858	1.13e-81	-	-	-	P	ko:K05571	-	ko00000,ko02000	Na+/H+ antiporter subunit
PHCCMDOK_02859	4.41e-52	-	-	-	P	ko:K05570	-	ko00000,ko02000	Multiple resistance and pH regulation protein F (MrpF / PhaF)
PHCCMDOK_02860	8.91e-106	mrpE	-	-	P	ko:K05569	-	ko00000,ko02000	Subunit E of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PHCCMDOK_02861	0.0	mrpD	-	-	CP	ko:K05568	-	ko00000,ko02000	Subunit D of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PHCCMDOK_02862	1.13e-66	mnhC	-	-	P	ko:K05567	-	ko00000,ko02000	Subunit C of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PHCCMDOK_02863	4.26e-93	mrpB	-	-	P	ko:K05566	-	ko00000,ko02000	Subunit B of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PHCCMDOK_02864	0.0	mrpA	-	-	CP	ko:K05565	-	ko00000,ko02000	COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit
PHCCMDOK_02866	1.52e-125	yqeG	-	-	S	ko:K07015	-	ko00000	hydrolase of the HAD superfamily
PHCCMDOK_02867	1.68e-276	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	In Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
PHCCMDOK_02868	3.05e-196	aroE	1.1.1.25	-	E	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PHCCMDOK_02869	2.17e-62	yhbY	-	-	J	ko:K07574	-	ko00000,ko03009	RNA-binding protein containing KH domain, possibly ribosomal protein
PHCCMDOK_02870	1.66e-136	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PHCCMDOK_02871	8.22e-138	yqeK	-	-	H	-	-	-	HD superfamily hydrolase involved in NAD metabolism
PHCCMDOK_02872	7.46e-81	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PHCCMDOK_02873	8.76e-201	yitL	-	-	S	ko:K00243	-	ko00000	protein conserved in bacteria
PHCCMDOK_02874	2.3e-172	-	-	-	S	-	-	-	Methyltransferase domain
PHCCMDOK_02875	3.39e-189	comER	-	-	E	ko:K02239	-	ko00000,ko00002,ko02044	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PHCCMDOK_02876	3.02e-129	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	COG1555 DNA uptake protein and related DNA-binding proteins
PHCCMDOK_02877	9.98e-140	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	ComE operon protein 2
PHCCMDOK_02878	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
PHCCMDOK_02879	9.62e-09	-	-	-	S	-	-	-	YqzM-like protein
PHCCMDOK_02880	6.51e-226	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
PHCCMDOK_02881	1.15e-48	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
PHCCMDOK_02882	2.82e-259	gpr	3.4.24.78	-	C	ko:K06012	-	ko00000,ko01000,ko01002	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
PHCCMDOK_02883	2.07e-262	spoIIP	-	-	M	ko:K06385	-	ko00000	stage II sporulation protein P
PHCCMDOK_02884	1.03e-68	-	-	-	-	-	-	-	-
PHCCMDOK_02885	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PHCCMDOK_02886	7.46e-279	hemN	-	-	H	-	-	-	Involved in the biosynthesis of porphyrin-containing compound
PHCCMDOK_02887	4.19e-239	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PHCCMDOK_02888	2.88e-110	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PHCCMDOK_02889	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
PHCCMDOK_02890	3.2e-265	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PHCCMDOK_02891	1.86e-217	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Methylates ribosomal protein L11
PHCCMDOK_02892	2.47e-168	rsmE	2.1.1.193	-	J	ko:K09761	-	ko00000,ko01000,ko03009	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PHCCMDOK_02893	0.0	yqeV	2.8.4.5	-	J	ko:K18707	-	ko00000,ko01000,ko03016	ribosomal protein S12 methylthiotransferase
PHCCMDOK_02894	1.48e-172	-	-	-	Q	-	-	-	ubiE/COQ5 methyltransferase family
PHCCMDOK_02895	7.22e-282	gltT	-	-	C	-	-	-	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PHCCMDOK_02896	7.06e-147	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PHCCMDOK_02897	3.1e-218	iolS	-	-	C	ko:K06607	-	ko00000,ko01000	Aldo keto reductase
PHCCMDOK_02898	1.39e-204	yqeW	-	-	P	ko:K03324	-	ko00000,ko02000	COG1283 Na phosphate symporter
PHCCMDOK_02899	1.03e-26	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
PHCCMDOK_02900	3.16e-92	yqeY	-	-	S	ko:K09117	-	ko00000	Yqey-like protein
PHCCMDOK_02901	8.29e-282	yqeZ	-	-	O	ko:K07403	-	ko00000	COG1030 Membrane-bound serine protease (ClpP class)
PHCCMDOK_02902	1.34e-153	yqfA	-	-	S	-	-	-	UPF0365 protein
PHCCMDOK_02903	7.2e-68	-	-	-	-	-	-	-	-
PHCCMDOK_02904	1e-62	yqfC	-	-	S	-	-	-	sporulation protein YqfC
PHCCMDOK_02905	1.75e-276	yqfD	-	-	S	ko:K06438	-	ko00000	Stage IV sporulation
PHCCMDOK_02906	2.65e-220	phoH	-	-	T	ko:K06217	-	ko00000	Phosphate starvation-inducible protein PhoH
PHCCMDOK_02907	0.0	yqfF	-	-	S	ko:K07037	-	ko00000	membrane-associated HD superfamily hydrolase
PHCCMDOK_02908	1.09e-105	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PHCCMDOK_02909	1.82e-80	dgkA	2.7.1.107, 2.7.1.66	-	M	ko:K00887,ko:K00901	ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231	ko00000,ko00001,ko01000	Diacylglycerol kinase
PHCCMDOK_02910	9.11e-92	cdd	3.5.4.5	-	F	ko:K01489	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
PHCCMDOK_02911	5.78e-215	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PHCCMDOK_02912	2.53e-25	-	-	-	S	-	-	-	YqzL-like protein
PHCCMDOK_02913	1.88e-176	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
PHCCMDOK_02915	4.79e-219	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
PHCCMDOK_02916	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
PHCCMDOK_02917	5.23e-144	ccpN	-	-	K	-	-	-	CBS domain
PHCCMDOK_02918	1.01e-183	yqfL	2.7.11.33, 2.7.4.28	-	S	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PHCCMDOK_02919	3.16e-102	yqxD	-	-	S	ko:K09768	-	ko00000	Belongs to the UPF0178 family
PHCCMDOK_02920	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PHCCMDOK_02921	1.45e-257	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PHCCMDOK_02922	6.91e-84	cccA	-	-	C	ko:K13300	-	ko00000	COG2010 Cytochrome c, mono- and diheme variants
PHCCMDOK_02923	3.74e-151	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
PHCCMDOK_02924	1.48e-250	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PHCCMDOK_02925	3.02e-227	ispH	1.17.7.4	-	IM	ko:K03527	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PHCCMDOK_02926	1.93e-110	-	-	-	K	ko:K07736	-	ko00000,ko03000	Transcription factor
PHCCMDOK_02927	2.66e-89	yqfQ	-	-	S	-	-	-	YqfQ-like protein
PHCCMDOK_02928	2.75e-316	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PHCCMDOK_02929	2.53e-208	nfo	3.1.21.2	-	L	ko:K01151	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PHCCMDOK_02931	1.88e-272	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
PHCCMDOK_02932	3.27e-168	-	-	-	M	-	-	-	Transglycosylase SLT domain
PHCCMDOK_02933	3.99e-183	zurA	-	-	P	ko:K02074,ko:K09817	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	'COG1121 ABC-type Mn Zn transport systems, ATPase component'
PHCCMDOK_02934	2.12e-179	zurM	-	-	P	ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1108 ABC-type Mn2 Zn2 transport systems, permease components
PHCCMDOK_02935	1.06e-99	zur	-	-	P	ko:K02076,ko:K03711	-	ko00000,ko03000	Belongs to the Fur family
PHCCMDOK_02936	2.05e-231	mreBH	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Rod-share determining protein MreBH
PHCCMDOK_02937	3.46e-302	yhdH	-	-	S	ko:K03308	-	ko00000	Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
PHCCMDOK_02938	2.07e-75	-	-	-	-	-	-	-	-
PHCCMDOK_02939	5.13e-61	-	-	-	K	-	-	-	SpoVT / AbrB like domain
PHCCMDOK_02940	1.81e-54	-	-	-	-	-	-	-	-
PHCCMDOK_02941	5.77e-145	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Caulimovirus viroplasmin
PHCCMDOK_02942	2.13e-311	ywdH	1.2.1.3	-	C	ko:K00128	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
PHCCMDOK_02943	7.66e-309	-	1.14.13.59	-	Q	ko:K03897	ko00310,ko01120,map00310,map01120	ko00000,ko00001,ko01000	L-lysine 6-monooxygenase (NADPH-requiring)
PHCCMDOK_02946	0.0	kat	1.11.1.6	-	P	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	ko00000,ko00001,ko00002,ko01000	serves to protect cells from the toxic effects of hydrogen peroxide
PHCCMDOK_02947	0.0	pepF2	-	-	E	-	-	-	COG1164 Oligoendopeptidase F
PHCCMDOK_02948	6.16e-155	-	-	-	-	-	-	-	-
PHCCMDOK_02949	6.68e-240	ythB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	COG1294 Cytochrome bd-type quinol oxidase, subunit 2
PHCCMDOK_02950	3.81e-310	ythA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	oxidase, subunit
PHCCMDOK_02951	1.21e-29	-	-	-	S	-	-	-	Fur-regulated basic protein B
PHCCMDOK_02954	6.61e-187	yfkD	-	-	S	-	-	-	YfkD-like protein
PHCCMDOK_02955	1.88e-276	yfkA	-	-	S	-	-	-	YfkB-like domain
PHCCMDOK_02956	2.5e-147	-	-	-	G	ko:K15640	-	ko00000	Belongs to the phosphoglycerate mutase family
PHCCMDOK_02957	1.57e-314	-	-	-	S	-	-	-	COG1253 Hemolysins and related proteins containing CBS domains
PHCCMDOK_02958	6.51e-181	-	-	-	S	ko:K08974	-	ko00000	Domain of unknown function (DUF368)
PHCCMDOK_02959	5.27e-189	pdaA	-	-	G	ko:K01567	-	ko00000,ko01000	deacetylase
PHCCMDOK_02961	1.71e-209	-	-	-	O	-	-	-	Pyridine nucleotide-disulphide oxidoreductase
PHCCMDOK_02962	3.42e-92	-	-	-	K	-	-	-	Transcriptional regulator
PHCCMDOK_02963	3.98e-108	-	-	-	G	-	-	-	Xylose isomerase-like TIM barrel
PHCCMDOK_02964	2.96e-146	surE	3.1.3.5	-	S	ko:K03787	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Survival protein SurE
PHCCMDOK_02965	3.09e-174	-	-	-	P	ko:K02012	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PHCCMDOK_02966	9.29e-235	-	-	-	P	ko:K02011	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_02967	7.46e-172	-	3.6.3.30	-	P	ko:K02010,ko:K02052	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PHCCMDOK_02968	2.29e-81	-	-	-	-	-	-	-	-
PHCCMDOK_02969	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PHCCMDOK_02970	4.93e-244	mccF	-	-	V	-	-	-	LD-carboxypeptidase
PHCCMDOK_02971	1.36e-65	-	-	-	-	-	-	-	-
PHCCMDOK_02972	2.58e-41	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
PHCCMDOK_02973	3.54e-67	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PHCCMDOK_02974	4.16e-42	-	-	-	-	-	-	-	-
PHCCMDOK_02975	1.5e-171	yjcH	-	-	P	ko:K07214	-	ko00000	COG2382 Enterochelin esterase and related enzymes
PHCCMDOK_02976	3.32e-119	yjcG	-	-	J	-	-	-	Belongs to the 2H phosphoesterase superfamily. YjcG family
PHCCMDOK_02977	5.03e-93	yjcF	-	-	S	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PHCCMDOK_02978	3.18e-238	yqgV	-	-	S	-	-	-	Thiamine-binding protein
PHCCMDOK_02979	6.28e-124	-	-	-	-	-	-	-	-
PHCCMDOK_02980	4.95e-180	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
PHCCMDOK_02981	6.71e-265	thiO	1.4.3.19	-	E	ko:K03153	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Glycine oxidase
PHCCMDOK_02982	2.03e-179	thiG	2.8.1.10	-	H	ko:K03149	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
PHCCMDOK_02983	1.28e-37	-	-	-	H	ko:K03154	ko04122,map04122	ko00000,ko00001	ThiS family
PHCCMDOK_02984	1.63e-140	thiE	2.5.1.3	-	H	ko:K00788	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PHCCMDOK_02985	0.0	aspA	4.3.1.1	-	E	ko:K01744	ko00250,ko01100,map00250,map01100	ko00000,ko00001,ko01000	Aspartate ammonia-lyase
PHCCMDOK_02986	1.04e-221	glcK	2.7.1.2	-	G	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Glucokinase
PHCCMDOK_02987	1.37e-10	yqgQ	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_02988	2.14e-105	-	-	-	-	-	-	-	-
PHCCMDOK_02989	7.09e-88	XK27_05190	-	-	S	-	-	-	Protein of unknown function (DUF1694)
PHCCMDOK_02990	0.0	spoVAF	-	-	EG	ko:K06408	-	ko00000	Bacillus/Clostridium GerA spore germination protein
PHCCMDOK_02991	0.0	gluP	3.4.21.105	-	O	ko:K19225	-	ko00000,ko01000,ko01002	membrane protein (homolog of Drosophila rhomboid)
PHCCMDOK_02993	2.63e-302	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter
PHCCMDOK_02994	3.31e-238	moeB	2.7.7.73, 2.7.7.80	-	H	ko:K03148,ko:K21029	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000	COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
PHCCMDOK_02995	5.39e-181	-	-	-	S	-	-	-	Integral membrane protein DUF92
PHCCMDOK_02996	2.01e-121	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PHCCMDOK_02997	6.04e-27	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
PHCCMDOK_02998	1.01e-158	-	-	-	G	-	-	-	PFAM Glycoside hydrolase 15-related
PHCCMDOK_02999	5.25e-79	-	-	-	-	-	-	-	-
PHCCMDOK_03000	1.13e-97	-	-	-	S	-	-	-	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PHCCMDOK_03001	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	penicillin-binding protein
PHCCMDOK_03003	3.55e-296	yqgE	-	-	EGP	ko:K08222	-	ko00000,ko02000	Major facilitator superfamily
PHCCMDOK_03004	1.93e-149	sodA	1.15.1.1	-	P	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	ko00000,ko00001,ko01000	radicals which are normally produced within the cells and which are toxic to biological systems
PHCCMDOK_03010	0.0	yjbB	-	-	P	ko:K03324	-	ko00000,ko02000	COG1283 Na phosphate symporter
PHCCMDOK_03011	6.02e-247	XK27_00915	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PHCCMDOK_03012	7.69e-147	-	-	-	O	-	-	-	NfeD-like C-terminal, partner-binding
PHCCMDOK_03013	3.64e-193	ypuA	-	-	S	-	-	-	Secreted protein
PHCCMDOK_03014	7.02e-227	-	-	-	EGP	ko:K08221	-	ko00000,ko02000	Sugar (and other) transporter
PHCCMDOK_03015	1.45e-69	fimV	-	-	NU	ko:K08086,ko:K15845	ko05120,map05120	ko00000,ko00001	translation initiation factor activity
PHCCMDOK_03016	1.01e-254	ispG	1.17.7.1, 1.17.7.3	-	I	ko:K03526	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
PHCCMDOK_03017	1.97e-85	yqfX	-	-	S	-	-	-	membrane
PHCCMDOK_03018	1e-138	yqfW	-	-	S	ko:K05967	-	ko00000	Belongs to the 5'(3')-deoxyribonucleotidase family
PHCCMDOK_03020	4.23e-49	-	-	-	S	-	-	-	Domain of Unknown Function (DUF1540)
PHCCMDOK_03021	3.74e-186	yaaC	-	-	S	-	-	-	YaaC-like Protein
PHCCMDOK_03022	0.0	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
PHCCMDOK_03023	1.62e-304	dacA	3.4.16.4	-	M	ko:K01286,ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PHCCMDOK_03024	3.16e-280	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PHCCMDOK_03025	3.2e-186	mtnU	3.5.1.3	-	S	ko:K13566	ko00250,map00250	ko00000,ko00001,ko01000	Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
PHCCMDOK_03026	0.0	pucR	-	-	QT	ko:K09684	-	ko00000,ko03000	COG2508 Regulator of polyketide synthase expression
PHCCMDOK_03027	0.0	rocR	-	-	KT	ko:K06714	-	ko00000,ko03000	COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
PHCCMDOK_03028	1.6e-290	rocD	2.6.1.13	-	E	ko:K00819	ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130	ko00000,ko00001,ko01000,ko01007	Catalyzes the interconversion of ornithine to glutamate semialdehyde
PHCCMDOK_03029	1.97e-239	rocG	1.4.1.2	-	E	ko:K00260	ko00220,ko00250,ko00430,ko00910,ko01100,map00220,map00250,map00430,map00910,map01100	ko00000,ko00001,ko01000	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
PHCCMDOK_03030	2.99e-307	nhaC_2	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter
PHCCMDOK_03031	3.52e-297	-	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
PHCCMDOK_03032	9.26e-290	-	2.5.1.48, 4.4.1.11	-	E	ko:K01739,ko:K01761	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
PHCCMDOK_03033	1.03e-285	-	-	-	E	ko:K01436	-	ko00000,ko01000,ko01002	Peptidase dimerisation domain
PHCCMDOK_03034	7.29e-245	-	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Homoserine dehydrogenase
PHCCMDOK_03035	0.0	gabD_2	1.2.1.9	-	C	ko:K00131	ko00010,ko00030,ko01100,ko01120,ko01200,map00010,map00030,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PHCCMDOK_03036	6.21e-79	-	-	-	S	ko:K08981	-	ko00000	Bacterial PH domain
PHCCMDOK_03037	2.39e-184	glnH	-	-	ET	ko:K02030,ko:K10036	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Ligated ion channel L-glutamate- and glycine-binding site
PHCCMDOK_03038	1.23e-141	glnP	-	-	E	ko:K02029,ko:K10037,ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Polar amino acid ABC transporter, inner membrane subunit
PHCCMDOK_03039	3.37e-162	-	3.6.3.21	-	E	ko:K02028,ko:K10038	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1126 ABC-type polar amino acid transport system, ATPase component
PHCCMDOK_03040	3.88e-242	-	-	-	E	ko:K02032,ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHCCMDOK_03041	6.47e-245	-	-	-	P	ko:K02031,ko:K16202	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHCCMDOK_03042	3.19e-214	-	-	-	EP	ko:K02033	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PHCCMDOK_03043	1.83e-203	-	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PHCCMDOK_03044	0.0	gsiB_3	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0747 ABC-type dipeptide transport system, periplasmic component
PHCCMDOK_03046	6.95e-108	tadA	3.5.4.33	-	FJ	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PHCCMDOK_03047	7.88e-131	clpP1	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PHCCMDOK_03048	1.57e-121	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
PHCCMDOK_03049	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PHCCMDOK_03050	4.53e-51	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PHCCMDOK_03051	9.21e-142	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PHCCMDOK_03052	1.6e-40	-	-	-	S	-	-	-	Protein of unknown function (DUF2508)
PHCCMDOK_03053	7.11e-29	bofA	-	-	S	ko:K06317	-	ko00000	Sigma-K factor-processing regulatory protein BofA
PHCCMDOK_03054	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PHCCMDOK_03055	4.5e-100	-	-	-	K	-	-	-	DNA-binding transcription factor activity
PHCCMDOK_03056	6.47e-235	pelB	4.2.2.2	-	G	ko:K01728	ko00040,ko02024,map00040,map02024	ko00000,ko00001,ko01000	Amb_all
PHCCMDOK_03058	0.0	-	-	-	S	-	-	-	ABC transporter
PHCCMDOK_03059	4.13e-147	-	-	-	T	-	-	-	protein histidine kinase activity
PHCCMDOK_03060	0.0	-	-	-	S	-	-	-	Protein of unknown function (DUF3298)
PHCCMDOK_03061	1.06e-183	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD
PHCCMDOK_03062	2.1e-266	yabE	-	-	T	-	-	-	protein conserved in bacteria
PHCCMDOK_03063	5.18e-130	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PHCCMDOK_03064	2.8e-200	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PHCCMDOK_03065	1.46e-207	yabG	-	-	S	ko:K06436	-	ko00000	peptidase
PHCCMDOK_03066	4.02e-53	veg	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_03067	1.8e-34	sspF	-	-	S	ko:K06423	-	ko00000	DNA topological change
PHCCMDOK_03068	1.85e-208	ispE	2.7.1.148	-	I	ko:K00919,ko:K16924	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PHCCMDOK_03069	1.56e-190	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
PHCCMDOK_03070	4.06e-81	yabJ	3.5.99.10	-	J	ko:K09022	-	ko00000,ko01000	translation initiation inhibitor, yjgF family
PHCCMDOK_03071	2.26e-64	spoVG	-	-	D	ko:K06412	-	ko00000	Essential for sporulation. Interferes with or is a negative regulator of the pathway leading to asymmetric septation
PHCCMDOK_03073	0.0	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PHCCMDOK_03074	7.02e-218	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PHCCMDOK_03075	1.79e-137	ctc	-	-	J	ko:K02897	ko03010,map03010	ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PHCCMDOK_03076	8.63e-131	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PHCCMDOK_03077	7.35e-53	yabK	-	-	S	-	-	-	Peptide ABC transporter permease
PHCCMDOK_03078	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PHCCMDOK_03079	1.89e-122	spoVT	-	-	K	ko:K04769	-	ko00000,ko03000	stage V sporulation protein
PHCCMDOK_03080	4.55e-134	-	-	-	S	-	-	-	Yip1 domain
PHCCMDOK_03081	1.43e-252	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PHCCMDOK_03082	8.06e-115	-	-	-	S	-	-	-	Yip1 domain
PHCCMDOK_03083	0.0	yabM	-	-	S	ko:K03328	-	ko00000	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PHCCMDOK_03084	0.0	yabN	3.6.1.66	-	S	ko:K02428,ko:K02499	ko00230,map00230	ko00000,ko00001,ko01000,ko03036	COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like
PHCCMDOK_03085	1.21e-35	yabO	-	-	J	-	-	-	COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
PHCCMDOK_03086	7.39e-147	yhcW	-	-	S	ko:K07025	-	ko00000	hydrolase
PHCCMDOK_03087	1.03e-29	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix domain
PHCCMDOK_03088	3.62e-50	-	-	-	-	-	-	-	-
PHCCMDOK_03089	3.65e-259	-	-	-	L	ko:K07487	-	ko00000	Transposase domain (DUF772)
PHCCMDOK_03090	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter (permease)
PHCCMDOK_03091	4.05e-174	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PHCCMDOK_03092	1.46e-158	rrp1	-	-	T	ko:K02483	-	ko00000,ko02022	Transcriptional regulatory protein, C terminal
PHCCMDOK_03093	1.11e-238	-	-	-	T	-	-	-	Histidine kinase-like ATPases
PHCCMDOK_03094	6.28e-36	-	-	-	S	-	-	-	Helix-turn-helix domain
PHCCMDOK_03095	1.14e-36	-	-	-	S	-	-	-	Domain of unknown function (DUF3173)
PHCCMDOK_03096	3.89e-284	-	-	-	L	-	-	-	Arm DNA-binding domain
PHCCMDOK_03097	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
PHCCMDOK_03098	0.0	yebA	-	-	E	-	-	-	COG1305 Transglutaminase-like enzymes
PHCCMDOK_03099	4.7e-263	yeaD	-	-	S	-	-	-	conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
PHCCMDOK_03100	4.23e-218	yeaC	-	-	S	ko:K03924	-	ko00000,ko01000	COG0714 MoxR-like ATPases
PHCCMDOK_03101	9.3e-126	-	-	-	CO	-	-	-	Thioredoxin
PHCCMDOK_03102	6.63e-231	yvnB	-	-	Q	-	-	-	Calcineurin-like phosphoesterase
PHCCMDOK_03104	2.37e-10	-	-	-	-	-	-	-	-
PHCCMDOK_03105	0.0	pbpC	3.4.16.4	-	M	ko:K02545,ko:K21467	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko00002,ko01000,ko01011,ko01504	Penicillin-binding Protein
PHCCMDOK_03106	7.6e-137	yfhC	-	-	C	-	-	-	nitroreductase
PHCCMDOK_03107	3.98e-146	cwlC	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	n-acetylmuramoyl-L-alanine amidase
PHCCMDOK_03108	1.35e-93	-	-	-	S	-	-	-	Bacteriophage holin family
PHCCMDOK_03110	0.0	-	-	-	L	-	-	-	Phage minor structural protein
PHCCMDOK_03111	4.3e-169	-	-	-	S	-	-	-	Phage tail protein
PHCCMDOK_03112	4.08e-183	-	-	-	D	-	-	-	Phage tail tape measure protein, TP901 family
PHCCMDOK_03113	3.92e-99	-	-	-	-	-	-	-	-
PHCCMDOK_03114	3.67e-93	-	-	-	-	-	-	-	-
PHCCMDOK_03115	4.1e-87	-	-	-	F	-	-	-	NUDIX domain
PHCCMDOK_03116	2.69e-128	-	-	-	S	-	-	-	Tetratricopeptide repeat
PHCCMDOK_03117	1.2e-50	-	-	-	-	-	-	-	-
PHCCMDOK_03118	7.21e-300	-	-	-	V	-	-	-	MatE
PHCCMDOK_03119	0.0	mcpC	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis protein
PHCCMDOK_03120	7.73e-280	-	-	-	C	ko:K03300	-	ko00000	Citrate transporter
PHCCMDOK_03121	1.96e-65	-	-	-	-	-	-	-	-
PHCCMDOK_03122	1.65e-299	-	-	-	E	-	-	-	Acyclic terpene utilisation family protein AtuA
PHCCMDOK_03123	0.0	-	-	-	KT	-	-	-	Transcriptional regulator
PHCCMDOK_03124	3.33e-133	pdxT	4.3.3.6	-	H	ko:K08681	ko00750,map00750	ko00000,ko00001,ko01000	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
PHCCMDOK_03125	1.2e-203	pdxS	4.3.3.6	-	H	ko:K06215	ko00750,map00750	ko00000,ko00001,ko01000	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
PHCCMDOK_03126	0.0	gabR	-	-	K	ko:K00375	-	ko00000,ko03000	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PHCCMDOK_03128	6.74e-119	ydaE	5.3.1.15	-	S	ko:K09988	ko00040,map00040	ko00000,ko00001,ko01000	Cupin 2, conserved barrel domain protein
PHCCMDOK_03129	7.44e-238	fruA2	-	-	G	ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	Phosphotransferase System
PHCCMDOK_03130	6.25e-63	-	2.7.1.202	-	G	ko:K02769	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
PHCCMDOK_03131	7.46e-101	-	2.7.1.202	-	G	ko:K02768	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PHCCMDOK_03132	4.35e-204	-	4.1.2.13	-	G	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-bisphosphate aldolase class-II
PHCCMDOK_03133	0.0	-	-	-	K	ko:K03491	-	ko00000,ko03000	transcriptional regulator, MtlR
PHCCMDOK_03134	0.0	uxaB	1.1.1.58	-	G	ko:K00041	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	tagaturonate reductase activity
PHCCMDOK_03135	0.0	uxaA	4.2.1.7	-	G	ko:K01685	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Altronate
PHCCMDOK_03136	8.79e-284	-	-	-	G	-	-	-	Tripartite ATP-independent periplasmic transporter, DctM component
PHCCMDOK_03137	6.3e-105	-	-	-	G	-	-	-	Tripartite ATP-independent periplasmic transporters, DctQ component
PHCCMDOK_03138	3.89e-241	-	-	-	G	-	-	-	Bacterial extracellular solute-binding protein, family 7
PHCCMDOK_03139	4.7e-238	-	1.1.1.380	-	E	ko:K08322	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	Alcohol dehydrogenase GroES-like domain
PHCCMDOK_03140	6.65e-204	-	-	-	K	-	-	-	AraC-like ligand binding domain
PHCCMDOK_03142	1.83e-315	-	-	-	G	ko:K02027,ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PHCCMDOK_03143	4.78e-223	yvcT	1.1.1.215, 1.1.1.26, 1.1.1.79, 1.1.1.81	-	CH	ko:K00015,ko:K00090	ko00030,ko00260,ko00620,ko00630,ko01100,ko01110,ko01120,map00030,map00260,map00620,map00630,map01100,map01110,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PHCCMDOK_03144	1.47e-110	-	2.3.1.128	-	K	ko:K03790	-	ko00000,ko01000,ko03009	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PHCCMDOK_03145	8.86e-250	ycgT	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
PHCCMDOK_03146	3.17e-131	-	-	-	S	-	-	-	SNARE associated Golgi protein
PHCCMDOK_03147	6.51e-69	yabP	-	-	S	-	-	-	Sporulation protein YabP
PHCCMDOK_03148	4.43e-93	yabQ	-	-	S	-	-	-	spore cortex biosynthesis protein
PHCCMDOK_03149	2.87e-79	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
PHCCMDOK_03150	8.65e-92	yabR	-	-	J	ko:K07571	-	ko00000	RNA binding protein (contains ribosomal protein S1 domain)
PHCCMDOK_03152	3.42e-283	citM	-	-	C	ko:K03300	-	ko00000	Citrate transporter
PHCCMDOK_03153	0.0	spoIIE	3.1.3.16	-	KT	ko:K06382	-	ko00000,ko01000	stage II sporulation protein E
PHCCMDOK_03154	2.19e-165	yabS	-	-	S	ko:K07114	-	ko00000,ko02000	protein containing a von Willebrand factor type A (vWA) domain
PHCCMDOK_03155	1.11e-221	yabT	2.7.11.1	-	KLT	ko:K08884	-	ko00000,ko01000,ko01001	serine threonine protein kinase
PHCCMDOK_03156	0.0	tilS	2.4.2.8, 6.3.4.19	-	D	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PHCCMDOK_03157	9.01e-121	hpt	2.4.2.8, 6.3.4.19	-	F	ko:K00760,ko:K15780	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Belongs to the purine pyrimidine phosphoribosyltransferase family
PHCCMDOK_03158	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PHCCMDOK_03159	3.69e-183	coaX	2.7.1.33	-	F	ko:K03525	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PHCCMDOK_03160	1.63e-201	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PHCCMDOK_03161	2.28e-221	cysK	2.5.1.47	-	E	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
PHCCMDOK_03162	0.0	pabB	2.6.1.85	-	EH	ko:K01665	ko00790,map00790	ko00000,ko00001,ko01000	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PHCCMDOK_03163	3.61e-138	pabA	2.6.1.85	-	EH	ko:K01664	ko00790,map00790	ko00000,ko00001,ko01000	Anthranilate synthase
PHCCMDOK_03164	1.82e-190	pabC	4.1.3.38	-	EH	ko:K02619	ko00790,map00790	ko00000,ko00001,ko01000	4-amino-4-deoxychorismate lyase
PHCCMDOK_03165	1.68e-188	folP	2.5.1.15	-	H	ko:K00796	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PHCCMDOK_03166	4.26e-80	folB	1.13.11.81, 4.1.2.25, 5.1.99.8	-	H	ko:K01633	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PHCCMDOK_03167	4.18e-118	folK	2.7.6.3	-	H	ko:K00950	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
PHCCMDOK_03168	5.32e-242	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PHCCMDOK_03169	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
PHCCMDOK_03172	7.69e-232	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	COG1459 Type II secretory pathway, component PulF
PHCCMDOK_03173	3.34e-224	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
PHCCMDOK_03174	0.0	yjcD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
PHCCMDOK_03175	1.12e-74	-	-	-	-	-	-	-	-
PHCCMDOK_03176	1.77e-94	cotX	-	-	S	ko:K06342	-	ko00000	Spore Coat Protein X and V domain
PHCCMDOK_03177	6.94e-07	-	-	-	-	-	-	-	-
PHCCMDOK_03179	1.7e-174	-	-	-	-	-	-	-	-
PHCCMDOK_03180	1.85e-152	-	-	-	-	-	-	-	-
PHCCMDOK_03181	1.34e-177	-	-	-	Q	-	-	-	ubiE/COQ5 methyltransferase family
PHCCMDOK_03182	2e-75	-	-	-	S	-	-	-	Protein of unknown function (DUF1360)
PHCCMDOK_03183	3.37e-176	fabI	1.3.1.10, 1.3.1.9	-	I	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl- acyl-carrier-protein reductase NADH
PHCCMDOK_03184	2.94e-207	rluD	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
PHCCMDOK_03185	7.48e-193	nadK	2.7.1.23	-	G	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PHCCMDOK_03186	1.02e-142	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	GTP pyrophosphokinase
PHCCMDOK_03187	3.08e-81	yjbL	-	-	S	-	-	-	Belongs to the UPF0738 family
PHCCMDOK_03188	1.72e-122	yjbK	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_03189	1.68e-135	yjbJ	-	-	M	-	-	-	COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
PHCCMDOK_03190	1.67e-95	yjbI	-	-	S	ko:K06886	-	ko00000	COG2346 Truncated hemoglobins
PHCCMDOK_03191	4.97e-219	yjbH	-	-	Q	-	-	-	dithiol-disulfide isomerase involved in polyketide biosynthesis
PHCCMDOK_03193	7.1e-260	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
PHCCMDOK_03194	1.11e-147	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC
PHCCMDOK_03195	2.03e-87	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PHCCMDOK_03197	6.86e-126	yjbC	-	-	K	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PHCCMDOK_03198	2.81e-295	-	-	-	S	-	-	-	Putative glycosyl hydrolase domain
PHCCMDOK_03199	1.34e-12	yoeD	-	-	G	-	-	-	Helix-turn-helix domain
PHCCMDOK_03200	2.48e-143	yplQ	-	-	S	ko:K11068	-	ko00000,ko02042	protein, Hemolysin III
PHCCMDOK_03201	1.76e-127	yueE	-	-	S	ko:K06950	-	ko00000	phosphohydrolase
PHCCMDOK_03202	3.34e-132	-	-	-	CO	-	-	-	Redoxin
PHCCMDOK_03204	4.12e-228	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Tryptophanyl-tRNA synthetase
PHCCMDOK_03205	0.0	-	-	-	S	-	-	-	AAA-like domain
PHCCMDOK_03206	1.25e-298	-	-	-	S	-	-	-	the current gene model (or a revised gene model) may contain a frame shift
PHCCMDOK_03207	2.1e-199	yddH	-	-	M	-	-	-	Lysozyme-like
PHCCMDOK_03208	3.25e-173	-	-	-	S	-	-	-	Conjugative transposon protein TcpC
PHCCMDOK_03209	6.4e-179	blt5	-	-	EGP	-	-	-	of the major facilitator superfamily
PHCCMDOK_03210	1.21e-43	-	-	-	S	-	-	-	Predicted integral membrane protein (DUF2269)
PHCCMDOK_03211	4.03e-239	pbpX	-	-	V	-	-	-	penicillin-binding protein
PHCCMDOK_03212	3.73e-54	-	-	-	S	-	-	-	Protein of unknown function (DUF4064)
PHCCMDOK_03213	3.36e-100	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PHCCMDOK_03215	5.64e-175	-	-	-	S	-	-	-	Alpha/beta hydrolase family
PHCCMDOK_03216	2.46e-139	-	-	-	L	ko:K07487	-	ko00000	PFAM transposase IS4 family protein
PHCCMDOK_03217	1.58e-94	-	-	-	L	ko:K07487	-	ko00000	Transposase
PHCCMDOK_03218	2.24e-134	-	-	-	K	-	-	-	BetI-type transcriptional repressor, C-terminal
PHCCMDOK_03219	1.46e-150	-	-	-	S	-	-	-	Sap, sulfolipid-1-addressing protein
PHCCMDOK_03220	2.13e-44	-	-	-	-	-	-	-	-
PHCCMDOK_03221	1.55e-206	-	-	-	I	-	-	-	Acyltransferase family
PHCCMDOK_03222	8.22e-41	-	-	-	K	-	-	-	Sigma-70, region 4
PHCCMDOK_03223	2.2e-42	-	-	-	K	-	-	-	Sigma-70, region 4
PHCCMDOK_03224	2.67e-52	-	-	-	S	-	-	-	Helix-turn-helix domain
PHCCMDOK_03225	8.94e-126	ydcL	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PHCCMDOK_03226	1.68e-184	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
PHCCMDOK_03227	2.22e-83	-	-	-	S	ko:K07148	-	ko00000	Protein of unknown function (DUF418)
PHCCMDOK_03228	5.45e-112	yqeB	-	-	-	-	-	-	-
PHCCMDOK_03229	1.67e-105	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PHCCMDOK_03230	6.33e-207	catE	1.13.11.2	-	S	ko:K07104	ko00361,ko00362,ko00622,ko00643,ko01100,ko01120,ko01220,map00361,map00362,map00622,map00643,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	glyoxalase
PHCCMDOK_03232	3.63e-143	ydhC	-	-	K	-	-	-	FCD
PHCCMDOK_03233	4.62e-252	ycsA	1.1.1.83, 1.1.1.93, 4.1.1.73	-	CE	ko:K07246	ko00630,ko00650,map00630,map00650	ko00000,ko00001,ko01000	Tartrate dehydrogenase
PHCCMDOK_03234	3.98e-85	-	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PHCCMDOK_03235	2.75e-154	-	-	-	C	-	-	-	Oxidoreductase NAD-binding domain
PHCCMDOK_03236	0.0	-	-	-	L	-	-	-	ABC transporter
PHCCMDOK_03237	1.54e-96	-	-	-	K	-	-	-	Activator of Hsp90 ATPase homolog 1-like protein
PHCCMDOK_03238	1.05e-74	-	-	-	K	ko:K03892	-	ko00000,ko03000	helix_turn_helix, Arsenical Resistance Operon Repressor
PHCCMDOK_03239	4.23e-87	frataxin	-	-	S	ko:K05937	-	ko00000	Domain of unknown function (DU1801)
PHCCMDOK_03240	8.09e-65	azlD	-	-	E	-	-	-	Branched-chain amino acid transport protein (AzlD)
PHCCMDOK_03241	1.95e-160	azlC	-	-	E	-	-	-	AzlC protein
PHCCMDOK_03242	3.12e-95	-	-	-	K	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PHCCMDOK_03243	4.61e-93	-	-	-	S	ko:K04750	-	ko00000	3-demethylubiquinone-9 3-methyltransferase
PHCCMDOK_03244	1.11e-59	-	-	-	GM	-	-	-	NmrA-like family
PHCCMDOK_03245	7.39e-292	-	-	-	F	-	-	-	Belongs to the Nudix hydrolase family
PHCCMDOK_03246	2.03e-87	-	-	-	J	-	-	-	L-PSP family endoribonuclease
PHCCMDOK_03247	3.99e-197	-	-	-	S	-	-	-	Phenazine biosynthesis-like protein
PHCCMDOK_03248	0.0	-	-	-	K	ko:K03491	-	ko00000,ko03000	transcriptional regulator, MtlR
PHCCMDOK_03249	7.2e-202	-	4.1.2.13	-	G	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-bisphosphate aldolase class-II
PHCCMDOK_03250	0.0	-	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type)
PHCCMDOK_03251	1.59e-207	aadK	-	-	G	ko:K05593	-	ko00000,ko01000,ko01504	Streptomycin adenylyltransferase
PHCCMDOK_03252	4.11e-123	-	-	-	-	-	-	-	-
PHCCMDOK_03254	5.17e-36	-	-	-	-	-	-	-	-
PHCCMDOK_03259	3.02e-128	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
PHCCMDOK_03260	0.0	-	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
PHCCMDOK_03261	4.09e-276	-	-	-	G	-	-	-	COG1593 TRAP-type C4-dicarboxylate transport system, large permease component
PHCCMDOK_03262	8.48e-106	-	-	-	G	-	-	-	Tripartite ATP-independent periplasmic transporters, DctQ component
PHCCMDOK_03263	5.04e-233	-	-	-	G	-	-	-	Bacterial extracellular solute-binding protein, family 7
PHCCMDOK_03264	5.31e-217	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PHCCMDOK_03265	4.59e-173	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PHCCMDOK_03266	0.0	yvcC1	3.6.3.44	-	V	ko:K02021,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter
PHCCMDOK_03267	2.19e-188	murR	-	-	K	-	-	-	Transcriptional regulator
PHCCMDOK_03268	1.19e-232	pdxA	1.1.1.408, 1.1.1.409	-	H	ko:K22024	-	ko00000,ko01000	Belongs to the PdxA family
PHCCMDOK_03269	1.08e-303	-	2.7.1.219, 2.7.1.220	-	S	ko:K22129	-	ko00000,ko01000	Putative nucleotide-binding of sugar-metabolising enzyme
PHCCMDOK_03270	3.28e-213	kdgT	-	-	P	ko:K02526	-	ko00000,ko02000	The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system
PHCCMDOK_03272	0.0	-	-	-	K	-	-	-	Propionate catabolism activator
PHCCMDOK_03273	1.55e-195	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PHCCMDOK_03274	5.27e-299	ybbF	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHCCMDOK_03275	6.69e-241	yleB	4.2.1.126	-	S	ko:K07106,ko:K09963	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Bacterial protein of unknown function (DUF871)
PHCCMDOK_03276	8.01e-229	purR15	-	-	K	ko:K02529	-	ko00000,ko03000	Bacterial regulatory proteins, lacI family
PHCCMDOK_03277	0.0	ydhP	3.2.1.21, 3.2.1.86	GT1	G	ko:K01223,ko:K05350	ko00010,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PHCCMDOK_03278	1.29e-191	-	-	-	GK	-	-	-	ROK family
PHCCMDOK_03279	7.03e-194	-	-	-	G	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_03280	5.44e-207	-	-	-	P	ko:K02026,ko:K10242	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0395 ABC-type sugar transport system, permease component
PHCCMDOK_03281	6.59e-278	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PHCCMDOK_03282	2.42e-189	manA3	3.2.1.78	GH26	G	ko:K01218	ko00051,ko02024,map00051,map02024	ko00000,ko00001,ko01000	Endoglucanase
PHCCMDOK_03283	8.39e-47	-	-	-	S	-	-	-	Protein of unknown function (DUF2642)
PHCCMDOK_03284	1.51e-17	-	-	-	-	-	-	-	-
PHCCMDOK_03285	1.35e-126	-	-	-	S	-	-	-	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
PHCCMDOK_03286	9.12e-174	-	-	-	C	-	-	-	alcohol dehydrogenase
PHCCMDOK_03287	4.47e-99	-	-	-	K	-	-	-	Transcriptional regulator
PHCCMDOK_03288	3.23e-70	fdx5	-	-	C	-	-	-	2Fe-2S iron-sulfur cluster binding domain
PHCCMDOK_03289	1.06e-28	-	-	-	-	-	-	-	-
PHCCMDOK_03290	0.0	-	-	-	KT	-	-	-	Transcriptional regulator
PHCCMDOK_03291	1.89e-275	adhB	1.1.1.1, 1.1.1.202	-	C	ko:K00001,ko:K00086	ko00010,ko00071,ko00350,ko00561,ko00625,ko00626,ko00640,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00561,map00625,map00626,map00640,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
PHCCMDOK_03292	3.31e-284	-	-	-	EG	-	-	-	COG2610 H gluconate symporter and related permeases
PHCCMDOK_03293	7.35e-221	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
PHCCMDOK_03294	2.98e-252	-	-	-	C	ko:K19954	-	ko00000,ko01000	alcohol dehydrogenase
PHCCMDOK_03295	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PHCCMDOK_03296	0.0	-	-	-	EG	ko:K06295	-	ko00000	Bacillus/Clostridium GerA spore germination protein
PHCCMDOK_03297	6.42e-84	-	-	-	-	-	-	-	-
PHCCMDOK_03298	3.43e-114	ectA	2.3.1.178	-	K	ko:K06718	ko00260,ko01100,ko01120,map00260,map01100,map01120	ko00000,ko00001,ko00002,ko01000	L-2,4-diaminobutyric acid acetyltransferase
PHCCMDOK_03299	7.39e-312	ectB	2.6.1.76	-	E	ko:K00836	ko00260,ko01100,ko01120,ko01210,ko01230,map00260,map01100,map01120,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PHCCMDOK_03300	1.59e-99	ectC	4.2.1.108	-	S	ko:K06720	ko00260,ko01100,ko01120,map00260,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the circularization of gamma-N-acetyl- alpha,gamma-diaminobutyric acid (ADABA) to ectoine (1,4,5,6- tetrahydro-2-methyl-4-pyrimidine carboxylic acid), which is an excellent osmoprotectant
PHCCMDOK_03301	1.92e-316	-	-	-	G	ko:K02027,ko:K05813	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Glycerol-3-phosphate ABC transporter substrate-binding protein
PHCCMDOK_03302	9.78e-188	-	-	-	G	-	-	-	Xylose isomerase-like TIM barrel
PHCCMDOK_03303	9.2e-210	-	-	-	G	ko:K02025,ko:K05814	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter (permease)
PHCCMDOK_03304	6.89e-190	-	-	-	P	ko:K05815	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PFAM binding-protein-dependent transport systems inner membrane component
PHCCMDOK_03305	6.37e-247	-	3.6.3.20	-	P	ko:K05816	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Belongs to the ABC transporter superfamily
PHCCMDOK_03307	2.85e-284	-	-	-	KLT	-	-	-	Protein kinase domain
PHCCMDOK_03310	4.87e-96	-	-	-	H	-	-	-	Tellurite resistance protein TehB
PHCCMDOK_03311	2.77e-64	-	-	-	S	-	-	-	ABC-2 family transporter protein
PHCCMDOK_03313	0.0	alkK	-	-	IQ	ko:K00666	-	ko00000,ko01000,ko01004	COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
PHCCMDOK_03314	0.0	-	6.2.1.3	-	IQ	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	AMP-binding enzyme C-terminal domain
PHCCMDOK_03315	4.94e-260	yhfS	2.3.1.9	-	I	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
PHCCMDOK_03316	4e-114	rapA	-	-	S	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	ko00000,ko00001,ko01000	Response regulator aspartate phosphatase
PHCCMDOK_03318	9.15e-50	-	-	-	S	-	-	-	Family of unknown function (DUF5344)
PHCCMDOK_03319	1.72e-300	-	-	-	S	-	-	-	LXG domain of WXG superfamily
PHCCMDOK_03320	2.38e-103	-	-	-	S	-	-	-	SMI1-KNR4 cell-wall
PHCCMDOK_03322	7.03e-177	dhrS4	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the short-chain dehydrogenases reductases (SDR) family
PHCCMDOK_03323	3.32e-240	yneE	-	-	K	-	-	-	Arabinose-binding domain of AraC transcription regulator, N-term
PHCCMDOK_03325	1.85e-96	nsrR	-	-	K	ko:K13771	ko05132,map05132	ko00000,ko00001,ko03000	Transcriptional regulator
PHCCMDOK_03326	2.69e-295	hmp	1.14.12.17, 1.18.1.3	-	C	ko:K05916,ko:K15765	ko00623,ko00920,ko01100,ko01120,ko01220,ko05132,map00623,map00920,map01100,map01120,map01220,map05132	ko00000,ko00001,ko00002,ko01000	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
PHCCMDOK_03327	0.0	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Glycerophosphoryl diester phosphodiesterase family
PHCCMDOK_03328	4.27e-253	ugpC	3.6.3.20	-	P	ko:K05816,ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Belongs to the ABC transporter superfamily
PHCCMDOK_03329	2.71e-207	ugpA	-	-	G	ko:K02025,ko:K05814	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter (permease)
PHCCMDOK_03330	1.36e-177	ugpE	-	-	P	ko:K05815	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Glycerol-3-phosphate ABC transporter permease
PHCCMDOK_03331	4.49e-300	ugpB	-	-	G	ko:K02027,ko:K05813	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Glycerol-3-phosphate ABC transporter substrate-binding protein
PHCCMDOK_03332	1.05e-175	glpQ1	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
PHCCMDOK_03333	5.53e-266	-	-	-	EGP	ko:K08162	-	ko00000,ko02000	Major Facilitator Superfamily
PHCCMDOK_03334	0.0	-	-	-	G	ko:K17318	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PHCCMDOK_03335	1.83e-188	-	-	-	G	-	-	-	Haloacid dehalogenase-like hydrolase
PHCCMDOK_03336	4.85e-119	-	-	-	K	ko:K02443	-	ko00000,ko03000	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
PHCCMDOK_03337	3.65e-224	-	-	-	G	ko:K17319	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_03338	2.5e-199	-	-	-	G	ko:K17320	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0395 ABC-type sugar transport system, permease component
PHCCMDOK_03339	3.59e-153	yhdW	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
PHCCMDOK_03340	5.39e-222	-	-	-	G	-	-	-	Xylose isomerase-like TIM barrel
PHCCMDOK_03341	1.8e-248	-	1.1.1.361	-	S	ko:K18652	-	ko00000,ko01000	Oxidoreductase family, C-terminal alpha/beta domain
PHCCMDOK_03342	1.41e-128	ykoP	-	-	G	-	-	-	polysaccharide deacetylase
PHCCMDOK_03343	2.85e-237	-	-	-	-	-	-	-	-
PHCCMDOK_03344	1.8e-178	fabG1	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PHCCMDOK_03345	6.23e-179	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PHCCMDOK_03346	2.95e-84	-	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PHCCMDOK_03347	5.34e-214	hutG	3.5.3.8	-	E	ko:K01479	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N-formimidoyl-L-glutamate to L-glutamate and formamide
PHCCMDOK_03348	0.0	-	-	-	E	-	-	-	amino acid
PHCCMDOK_03349	4.6e-224	-	-	-	K	-	-	-	AraC-like ligand binding domain
PHCCMDOK_03350	0.0	rhaA	2.7.1.5, 5.3.1.14	-	G	ko:K00848,ko:K01813	ko00040,ko00051,ko01120,map00040,map00051,map01120	ko00000,ko00001,ko01000	Belongs to the rhamnose isomerase family
PHCCMDOK_03351	0.0	yuxG	-	-	IQ	-	-	-	Class II Aldolase and Adducin N-terminal domain
PHCCMDOK_03352	1.87e-68	rhaM	5.1.3.32	-	G	ko:K03534	-	ko00000,ko01000	Involved in the anomeric conversion of L-rhamnose
PHCCMDOK_03353	8.49e-285	-	-	-	EGP	ko:K06610	-	ko00000,ko02000	Major facilitator superfamily
PHCCMDOK_03354	1.61e-188	-	-	-	K	-	-	-	AraC-like ligand binding domain
PHCCMDOK_03355	5.8e-293	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PHCCMDOK_03356	6.88e-277	-	-	-	EM	-	-	-	Protein of unknown function (DUF993)
PHCCMDOK_03357	4.71e-199	-	-	-	G	-	-	-	Xylose isomerase-like TIM barrel
PHCCMDOK_03358	2.84e-266	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PHCCMDOK_03359	0.0	-	2.7.13.3	-	T	ko:K07718	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHCCMDOK_03360	2.58e-253	-	-	-	T	ko:K07720	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	helix_turn_helix, arabinose operon control protein
PHCCMDOK_03361	9.51e-316	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PHCCMDOK_03362	3.38e-224	-	-	-	G	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_03363	1.15e-198	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_03364	4.05e-246	-	-	-	I	-	-	-	Acyltransferase family
PHCCMDOK_03365	3.16e-296	ciaH	2.7.13.3	-	T	ko:K14982	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	His Kinase A (phosphoacceptor) domain
PHCCMDOK_03366	5.64e-152	ykoG	-	-	T	ko:K02483	-	ko00000,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PHCCMDOK_03367	1.89e-162	-	-	-	S	-	-	-	L-2-amino-thiazoline-4-carboxylic acid hydrolase
PHCCMDOK_03369	1.25e-71	-	-	-	-	-	-	-	-
PHCCMDOK_03370	0.0	yesW	4.2.2.23, 4.2.2.24	PL11	E	ko:K18197,ko:K18198	-	ko00000,ko01000	cell wall organization
PHCCMDOK_03371	7.74e-299	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PHCCMDOK_03372	6.96e-195	-	-	-	G	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_03373	3.44e-200	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_03374	0.0	abfA	3.2.1.55	GH51	G	ko:K01209	ko00520,map00520	ko00000,ko00001,ko01000	alpha-L-arabinofuranosidase activity
PHCCMDOK_03375	6.51e-308	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PHCCMDOK_03376	5.07e-204	-	-	-	G	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_03377	6.38e-196	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_03378	5.32e-131	-	-	-	S	-	-	-	Protein of unknown function, DUF624
PHCCMDOK_03379	3.48e-216	M1-640	-	-	K	-	-	-	Transcriptional regulator
PHCCMDOK_03380	1.21e-209	rhaR1	-	-	K	-	-	-	AraC-like ligand binding domain
PHCCMDOK_03381	6.56e-180	araL	-	-	G	ko:K02101	-	ko00000	Haloacid dehalogenase-like hydrolase
PHCCMDOK_03382	7.7e-275	egsA	1.1.1.261	-	C	ko:K00096	ko00564,map00564	ko00000,ko00001,ko01000	Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P). The G1P thus generated is probably used for the synthesis of phosphoglycerolipids in Gram-positive bacterial species
PHCCMDOK_03383	5.92e-174	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
PHCCMDOK_03384	0.0	araB	2.7.1.16	-	C	ko:K00853	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	Belongs to the ribulokinase family
PHCCMDOK_03385	0.0	araA	5.3.1.4	-	G	ko:K01804	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of L-arabinose to L-ribulose
PHCCMDOK_03386	4.61e-251	chvE	-	-	G	ko:K10546	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PHCCMDOK_03387	0.0	araG	3.6.3.17	-	G	ko:K10548	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system
PHCCMDOK_03388	6.41e-247	araH	-	-	G	ko:K10544,ko:K10547	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PHCCMDOK_03389	0.0	melA7	3.2.1.22	-	G	ko:K07406	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	Family 4 glycosyl hydrolase
PHCCMDOK_03391	6.75e-115	-	-	-	-	-	-	-	-
PHCCMDOK_03393	4.75e-101	-	-	-	S	-	-	-	Putative small multi-drug export protein
PHCCMDOK_03394	3.52e-108	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	Transport permease protein
PHCCMDOK_03395	7.94e-10	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	Transport permease protein
PHCCMDOK_03396	1.3e-225	-	-	-	KTV	ko:K01990	-	ko00000,ko00002,ko02000	LytTr DNA-binding domain
PHCCMDOK_03397	2.37e-62	ykkD_1	-	-	P	ko:K18925	-	ko00000,ko00002,ko02000	Small Multidrug Resistance protein
PHCCMDOK_03398	1.69e-77	ykkC_1	-	-	P	ko:K18924	-	ko00000,ko00002,ko02000	Small Multidrug Resistance protein
PHCCMDOK_03399	3.47e-129	yvdT_1	-	-	K	-	-	-	Transcriptional regulator
PHCCMDOK_03400	6.48e-303	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PHCCMDOK_03401	1.95e-174	iolR	-	-	K	ko:K06608,ko:K11534	-	ko00000,ko03000	COG1349 Transcriptional regulators of sugar metabolism
PHCCMDOK_03402	0.0	iolA	1.2.1.18, 1.2.1.27	-	C	ko:K00140	ko00280,ko00410,ko00562,ko00640,ko01100,ko01200,map00280,map00410,map00562,map00640,map01100,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PHCCMDOK_03403	1.41e-199	iolB	5.3.1.30	-	G	ko:K03337	ko00562,ko01100,ko01120,map00562,map01100,map01120	ko00000,ko00001,ko01000	Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate)
PHCCMDOK_03404	9.35e-228	iolC	2.7.1.92	-	G	ko:K03338	ko00562,ko01100,ko01120,map00562,map01100,map01120	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5- dehydro-2-deoxy-D-gluconate (DKGP)
PHCCMDOK_03405	0.0	iolD	3.7.1.22	-	E	ko:K03336	ko00562,ko01100,ko01120,map00562,map01100,map01120	ko00000,ko00001,ko01000	Involved in the cleavage of the C1-C2 bond of 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy- glucuronate (5DG)
PHCCMDOK_03406	6.09e-226	iolE	4.2.1.44	-	G	ko:K03335	ko00562,ko01100,ko01120,map00562,map01100,map01120	ko00000,ko00001,ko01000	Catalyzes the dehydration of inosose (2-keto-myo- inositol, 2KMI or 2,4,6 3,5-pentahydroxycyclohexanone) to 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi- inositol)
PHCCMDOK_03407	5.8e-248	iolG	1.1.1.18, 1.1.1.369	-	S	ko:K00010	ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130	ko00000,ko00001,ko01000	Involved in the oxidation of myo-inositol (MI) and D- chiro-inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D-chiro-inositol (1KDCI), respectively
PHCCMDOK_03408	5.52e-208	iolJ	4.1.2.13, 4.1.2.29	-	F	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Produces dihydroxyacetone phosphate (DHAP or glycerone phosphate) and malonic semialdehyde (MSA or 3-oxopropanoate) from 6-phospho-5-dehydro-2-deoxy-D-gluconate (DKGP)
PHCCMDOK_03409	3.34e-244	-	1.1.1.18, 1.1.1.369, 1.1.1.370	-	S	ko:K00010,ko:K16043	ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130	ko00000,ko00001,ko01000	Oxidoreductase family, NAD-binding Rossmann fold
PHCCMDOK_03410	0.0	-	-	-	S	ko:K03307	-	ko00000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PHCCMDOK_03411	6.57e-134	-	-	-	S	-	-	-	Protein of unknown function (DUF421)
PHCCMDOK_03412	1.66e-305	metY	2.5.1.49	-	E	ko:K01740	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	O-acetylhomoserine
PHCCMDOK_03413	5.49e-48	-	-	-	L	ko:K07483	-	ko00000	Transposase
PHCCMDOK_03414	2.19e-61	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PHCCMDOK_03415	1.13e-248	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PHCCMDOK_03416	1.13e-152	cas4	3.1.12.1	-	L	ko:K07464	-	ko00000,ko01000,ko02048	RecB family exonuclease
PHCCMDOK_03417	3.72e-202	csd2	-	-	L	ko:K19115,ko:K19118	-	ko00000,ko02048	CRISPR-associated protein Cas7
PHCCMDOK_03418	0.0	csd1	-	-	M	ko:K19117	-	ko00000,ko02048	CRISPR-associated protein (Cas_Csd1)
PHCCMDOK_03419	1.4e-177	cas5	-	-	S	ko:K19119	-	ko00000,ko02048	CRISPR-associated protein (Cas_Cas5)
PHCCMDOK_03421	0.0	-	-	-	L	ko:K07012	-	ko00000,ko01000,ko02048	Metal dependent phosphohydrolases with conserved 'HD' motif.
PHCCMDOK_03422	9.43e-162	racX	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
PHCCMDOK_03423	5.49e-99	-	-	-	S	-	-	-	CRISPR-associated endoribonuclease Cas6
PHCCMDOK_03424	7.73e-13	-	-	-	L	-	-	-	RAMP superfamily
PHCCMDOK_03427	1.79e-104	-	-	-	L	ko:K19134	-	ko00000,ko02048	RAMP superfamily
PHCCMDOK_03429	4.5e-97	-	-	-	S	-	-	-	Psort location Cytoplasmic, score
PHCCMDOK_03430	5.24e-230	-	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	COG3103 SH3 domain protein
PHCCMDOK_03431	7.66e-136	-	-	-	S	-	-	-	CAAX protease self-immunity
PHCCMDOK_03432	7.67e-162	-	-	-	K	ko:K11922	-	ko00000,ko03000	UTRA
PHCCMDOK_03433	1.96e-310	glvA	3.2.1.122	GH4	G	ko:K01232	ko00500,map00500	ko00000,ko00001,ko01000	COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
PHCCMDOK_03434	7.68e-172	-	3.5.1.105	-	G	ko:K03478	-	ko00000,ko01000	Probably catalyzes the deacetylation of acetylated carbohydrates an important step in the degradation of oligosaccharides
PHCCMDOK_03435	0.0	nagE	2.7.1.193, 2.7.1.199	-	G	ko:K02803,ko:K02804,ko:K20116,ko:K20117,ko:K20118	ko00010,ko00520,ko02060,map00010,map00520,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG1263 Phosphotransferase system IIC components, glucose maltose N-acetylglucosamine-specific
PHCCMDOK_03437	5.73e-23	-	-	-	-	-	-	-	-
PHCCMDOK_03441	1.04e-106	-	-	-	-	-	-	-	-
PHCCMDOK_03442	5.53e-159	-	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
PHCCMDOK_03443	0.0	-	4.3.2.2, 5.5.1.2	-	F	ko:K01756,ko:K01857	ko00230,ko00250,ko00362,ko01100,ko01110,ko01120,ko01130,ko01220,map00230,map00250,map00362,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko00002,ko01000	Adenylosuccinate lyase C-terminus
PHCCMDOK_03444	0.0	-	2.7.1.199, 2.7.1.208	-	G	ko:K02790,ko:K02791	ko00010,ko00500,ko00520,ko02060,map00010,map00500,map00520,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHCCMDOK_03445	2.79e-171	ycsE	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sucrose-6F-phosphate phosphohydrolase
PHCCMDOK_03446	1.52e-73	-	-	-	-	-	-	-	-
PHCCMDOK_03447	2.28e-121	-	-	-	S	-	-	-	DinB superfamily
PHCCMDOK_03448	6.95e-45	-	-	-	-	-	-	-	-
PHCCMDOK_03449	0.0	tagE6	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
PHCCMDOK_03450	1.12e-71	-	-	-	-	-	-	-	-
PHCCMDOK_03451	1.47e-76	yetG	1.14.99.48	-	S	ko:K07145	ko00860,ko01110,map00860,map01110	ko00000,ko00001,ko01000	Antibiotic biosynthesis monooxygenase
PHCCMDOK_03452	0.0	asbA	-	-	Q	-	-	-	Siderophore biosynthesis protein
PHCCMDOK_03453	0.0	asbB	-	-	Q	-	-	-	IucA / IucC family
PHCCMDOK_03454	2.93e-279	asbC	-	-	IQ	ko:K00666	-	ko00000,ko01000,ko01004	AMP-binding enzyme C-terminal domain
PHCCMDOK_03455	9.05e-55	asbD	-	-	IQ	-	-	-	Phosphopantetheine attachment site
PHCCMDOK_03456	3.63e-231	asbE	-	-	IQ	-	-	-	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PHCCMDOK_03457	7.17e-199	asbF	4.2.1.118	-	G	ko:K15652	ko00400,ko01110,ko01130,map00400,map01110,map01130	ko00000,ko00001,ko01000	Xylose isomerase-like TIM barrel
PHCCMDOK_03458	2.43e-125	-	3.1.3.82, 3.1.3.83	-	E	ko:K03273	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	D,D-heptose 1,7-bisphosphate phosphatase
PHCCMDOK_03459	2.12e-309	dsdA	4.3.1.18	-	E	ko:K01753	ko00260,map00260	ko00000,ko00001,ko01000	Belongs to the serine threonine dehydratase family. DsdA subfamily
PHCCMDOK_03460	4.45e-187	exoA	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
PHCCMDOK_03461	1.67e-161	yeeN	-	-	K	-	-	-	transcriptional regulatory protein
PHCCMDOK_03462	5.72e-188	ywfM	-	-	EG	ko:K03298	-	ko00000,ko02000	EamA-like transporter family
PHCCMDOK_03464	2.78e-71	yitW	-	-	S	-	-	-	metal-sulfur cluster biosynthetic enzyme
PHCCMDOK_03465	1.28e-06	-	-	-	S	-	-	-	Putative methionine and alanine importer, small subunit
PHCCMDOK_03466	0.0	-	-	-	S	ko:K03308	-	ko00000	Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
PHCCMDOK_03467	1.65e-134	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
PHCCMDOK_03468	1.39e-88	-	-	-	-	-	-	-	-
PHCCMDOK_03469	1.78e-56	-	-	-	-	-	-	-	-
PHCCMDOK_03470	4.24e-270	blt	-	-	EGP	ko:K08153,ko:K19578	-	ko00000,ko00002,ko02000	COG0477 Permeases of the major facilitator superfamily
PHCCMDOK_03471	1.58e-55	-	-	-	-	-	-	-	-
PHCCMDOK_03472	4.45e-137	-	-	-	-	-	-	-	-
PHCCMDOK_03473	1.3e-149	-	-	-	M	ko:K21471,ko:K21472	-	ko00000,ko01000,ko01002,ko01011	lytic transglycosylase activity
PHCCMDOK_03474	2.6e-233	-	-	-	Q	-	-	-	O-methyltransferase
PHCCMDOK_03476	0.0	odhA	1.2.4.2	-	C	ko:K00164	ko00020,ko00310,ko00380,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map00380,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components 2- oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3)
PHCCMDOK_03477	2.89e-251	odhB	2.3.1.61	-	C	ko:K00658	ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2)
PHCCMDOK_03478	9.15e-45	yozC	-	-	-	-	-	-	-
PHCCMDOK_03479	0.0	ykpA	-	-	S	-	-	-	COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PHCCMDOK_03480	4.18e-198	yvgN	-	-	S	-	-	-	reductase
PHCCMDOK_03481	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	DNA helicase
PHCCMDOK_03482	2.56e-72	ytxJ	-	-	O	-	-	-	Protein of unknown function (DUF2847)
PHCCMDOK_03483	4.46e-118	yocC	-	-	-	-	-	-	-
PHCCMDOK_03484	8.48e-132	yokL3	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PHCCMDOK_03485	4.04e-210	-	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	Helix-hairpin-helix class 2 (Pol1 family) motifs
PHCCMDOK_03486	1.15e-160	bshB2	-	-	S	ko:K22135	-	ko00000,ko01000	deacetylase
PHCCMDOK_03487	1.15e-79	yojF	-	-	S	-	-	-	Protein of unknown function (DUF1806)
PHCCMDOK_03488	3.8e-145	mucD	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PHCCMDOK_03489	2.16e-89	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2188)
PHCCMDOK_03491	1.35e-268	ydbM	-	-	I	-	-	-	acyl-CoA dehydrogenase
PHCCMDOK_03492	9.9e-205	-	-	-	S	-	-	-	membrane
PHCCMDOK_03493	0.0	-	-	-	S	ko:K06915	-	ko00000	Domain of unknown function DUF87
PHCCMDOK_03494	2.76e-221	-	-	-	S	-	-	-	NurA
PHCCMDOK_03495	3.04e-58	abrB	-	-	K	ko:K06284	-	ko00000,ko03000	COG2002 Regulators of stationary sporulation gene expression
PHCCMDOK_03496	1.29e-199	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PHCCMDOK_03497	9.86e-54	yazA	-	-	L	ko:K07461	-	ko00000	endonuclease containing a URI domain
PHCCMDOK_03498	1.28e-172	yabB	2.1.1.223	-	S	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Conserved hypothetical protein 95
PHCCMDOK_03499	1.21e-59	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
PHCCMDOK_03500	3.66e-188	yaaT	-	-	S	-	-	-	stage 0 sporulation protein
PHCCMDOK_03501	3.03e-233	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
PHCCMDOK_03502	9.77e-71	yaaQ	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_03503	6.14e-147	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PHCCMDOK_03504	0.0	yaaO	-	-	E	-	-	-	Orn Lys Arg decarboxylase
PHCCMDOK_03506	1.09e-224	-	-	-	S	ko:K06885	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
PHCCMDOK_03507	0.0	dhaS	1.2.1.3, 1.2.1.39	-	C	ko:K00128,ko:K00146	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00360,ko00380,ko00410,ko00561,ko00620,ko00625,ko00643,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00360,map00380,map00410,map00561,map00620,map00625,map00643,map00903,map00981,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
PHCCMDOK_03508	2.39e-253	adhA	1.1.1.1	-	C	ko:K13953	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
PHCCMDOK_03509	0.0	-	-	-	T	ko:K02481	-	ko00000,ko02022	Sigma-54 interaction domain
PHCCMDOK_03510	0.0	cckA	2.7.13.3	-	T	ko:K02482	-	ko00000,ko01000,ko01001,ko02022	GAF domain
PHCCMDOK_03511	3.81e-17	-	-	-	-	-	-	-	-
PHCCMDOK_03512	2.91e-259	dhaT	1.1.1.202	-	C	ko:K00086	ko00561,ko00640,map00561,map00640	ko00000,ko00001,ko01000	alcohol dehydrogenase
PHCCMDOK_03513	1.79e-29	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
PHCCMDOK_03514	1.44e-171	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PHCCMDOK_03515	2.48e-164	-	1.5.1.39	-	C	ko:K10678,ko:K19286	ko00633,ko00740,ko01100,ko01120,map00633,map00740,map01100,map01120	ko00000,ko00001,ko01000	Oxidoreductase
PHCCMDOK_03516	6.61e-278	mtnE	-	-	E	ko:K08969	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
PHCCMDOK_03517	8.39e-144	-	-	-	Q	-	-	-	Fumarylacetoacetate (FAA) hydrolase family
PHCCMDOK_03518	1.01e-169	yqiK	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
PHCCMDOK_03519	0.0	tagE6	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
PHCCMDOK_03520	0.0	yhcX	-	-	K	-	-	-	Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
PHCCMDOK_03521	1.09e-154	sfsA	-	-	S	ko:K06206	-	ko00000	Sugar fermentation stimulation protein
PHCCMDOK_03522	0.0	-	1.1.5.3	-	C	ko:K00111	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	C-terminal domain of alpha-glycerophosphate oxidase
PHCCMDOK_03523	0.0	pgcA	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase
PHCCMDOK_03524	0.0	spoVR	-	-	S	ko:K06415	-	ko00000	Stage V sporulation protein R
PHCCMDOK_03525	0.0	yknU	-	-	V	ko:K06147,ko:K11085	ko02010,map02010	ko00000,ko00001,ko01000,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
PHCCMDOK_03526	0.0	yknV	-	-	V	ko:K02021,ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
PHCCMDOK_03527	1.01e-292	avtA	-	-	EK	ko:K05825	ko00300,ko01100,ko01130,ko01210,map00300,map01100,map01130,map01210	ko00000,ko00001,ko01000	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PHCCMDOK_03528	2.6e-201	yeaB	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PHCCMDOK_03529	2.52e-224	-	-	-	L	ko:K07496	-	ko00000	Transposase
PHCCMDOK_03530	1.64e-261	ilvE	2.6.1.42	-	E	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Branched-chain amino acid aminotransferase
PHCCMDOK_03531	1.62e-187	ysaA	3.1.3.5, 3.8.1.2	-	S	ko:K01560,ko:K07025,ko:K08723	ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120	ko00000,ko00001,ko01000	HAD-hyrolase-like
PHCCMDOK_03532	8.73e-132	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
PHCCMDOK_03533	0.0	ykoD	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
PHCCMDOK_03534	1.74e-181	ykoC	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
PHCCMDOK_03535	1.16e-140	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
PHCCMDOK_03536	3.51e-137	yvdD	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the LOG family
PHCCMDOK_03537	1.61e-145	-	-	CBM50	M	ko:K19224	-	ko00000,ko01000,ko01002,ko01011	COG1388 FOG LysM repeat
PHCCMDOK_03538	4.41e-289	-	-	-	S	-	-	-	Acetyltransferase
PHCCMDOK_03539	2.74e-132	yvdT	-	-	K	-	-	-	Transcriptional regulator
PHCCMDOK_03540	2.51e-235	yvbT	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PHCCMDOK_03541	1.89e-173	spoIISA	-	-	S	ko:K06388	-	ko00000	Toxin SpoIISA, type II toxin-antitoxin system
PHCCMDOK_03542	5.07e-236	ywcH1	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PHCCMDOK_03543	1.21e-214	mccA	2.5.1.134, 2.5.1.47	-	E	ko:K01738,ko:K17216	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Cysteine synthase
PHCCMDOK_03544	6.23e-266	mccB	4.4.1.1, 4.4.1.2, 4.4.1.8	-	E	ko:K01760,ko:K17217	ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
PHCCMDOK_03545	5.51e-153	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
PHCCMDOK_03546	3.91e-131	-	-	GT2,GT4	M	ko:K20444	-	ko00000,ko01000,ko01005,ko02000	transferase activity, transferring glycosyl groups
PHCCMDOK_03547	2.41e-129	-	-	-	-	-	-	-	-
PHCCMDOK_03548	6.41e-160	-	-	-	M	-	-	-	Glycosyl transferases group 1
PHCCMDOK_03549	1.16e-213	-	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	GDP-mannose 4,6 dehydratase
PHCCMDOK_03550	3.91e-124	-	-	-	J	-	-	-	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PHCCMDOK_03551	9.45e-281	-	-	-	EGP	-	-	-	COG0477 Permeases of the major facilitator superfamily
PHCCMDOK_03552	2.9e-114	-	-	-	S	-	-	-	Uncharacterised protein family UPF0066
PHCCMDOK_03554	3.5e-170	yafE	-	-	Q	-	-	-	methyltransferase
PHCCMDOK_03556	0.0	-	1.3.98.3	-	H	ko:K02495	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of porphyrin-containing compound
PHCCMDOK_03557	0.0	-	-	-	I	-	-	-	radical SAM domain protein
PHCCMDOK_03559	3.29e-181	-	-	-	S	-	-	-	carbohydrate derivative metabolic process
PHCCMDOK_03560	2.48e-162	frlR3	-	-	K	ko:K03710	-	ko00000,ko03000	transcriptional
PHCCMDOK_03561	3.51e-281	-	-	-	JM	-	-	-	Bacterial transferase hexapeptide (six repeats)
PHCCMDOK_03562	1.91e-122	-	-	-	M	-	-	-	3D domain
PHCCMDOK_03563	4.57e-213	yfhF	-	-	S	ko:K07071	-	ko00000	nucleoside-diphosphate sugar epimerase
PHCCMDOK_03564	8.48e-177	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Modulates RecA activity
PHCCMDOK_03565	8.82e-68	yfhH	-	-	S	-	-	-	Protein of unknown function (DUF1811)
PHCCMDOK_03566	9.25e-30	-	-	-	S	-	-	-	YpzG-like protein
PHCCMDOK_03567	2.33e-237	yfhP	-	-	S	ko:K07038	-	ko00000	membrane-bound metal-dependent
PHCCMDOK_03568	1.15e-258	mutY	-	-	L	ko:K03575	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	A G-specific
PHCCMDOK_03569	6.72e-162	-	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PHCCMDOK_03570	2.23e-77	-	-	-	-	-	-	-	-
PHCCMDOK_03571	5.62e-27	yfhS	-	-	-	-	-	-	-
PHCCMDOK_03572	9.29e-169	fabL	1.3.1.104	-	IQ	ko:K10780	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PHCCMDOK_03573	1.22e-22	-	-	-	S	ko:K06422	-	ko00000	Small, acid-soluble spore protein, gamma-type
PHCCMDOK_03574	2.94e-133	ygaC	-	-	J	ko:K07586	-	ko00000	Belongs to the UPF0374 family
PHCCMDOK_03575	0.0	ygaD	-	-	V	ko:K11085	ko02010,map02010	ko00000,ko00001,ko01000,ko02000	ABC transporter
PHCCMDOK_03576	1.04e-234	ygaE	-	-	S	-	-	-	Membrane
PHCCMDOK_03577	9.74e-312	gsaB	5.4.3.8	-	H	ko:K01845	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Glutamate-1-semialdehyde aminotransferase
PHCCMDOK_03578	5.46e-113	bcp	1.11.1.15	-	O	ko:K03564	-	ko00000,ko01000	Peroxiredoxin
PHCCMDOK_03579	2.67e-222	ghrA	-	-	EH	-	-	-	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PHCCMDOK_03580	6.47e-64	-	-	-	S	-	-	-	Cyclic-di-AMP receptor
PHCCMDOK_03581	1.18e-103	perR	-	-	P	ko:K09825	-	ko00000,ko03000	Belongs to the Fur family
PHCCMDOK_03582	6.28e-75	ygzB	-	-	S	-	-	-	UPF0295 protein
PHCCMDOK_03585	8.34e-221	-	-	-	L	-	-	-	Endonuclease/Exonuclease/phosphatase family
PHCCMDOK_03586	7.21e-101	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PHCCMDOK_03589	1.96e-110	-	2.7.1.190	-	S	ko:K17910	-	ko00000,ko01000,ko01504	Protein of unknown function (DUF1679)
PHCCMDOK_03590	4.39e-149	-	-	-	O	-	-	-	Sap, sulfolipid-1-addressing protein
PHCCMDOK_03591	5.18e-94	-	-	-	-	-	-	-	-
PHCCMDOK_03592	1.82e-183	-	-	-	K	-	-	-	MerR family transcriptional regulator
PHCCMDOK_03593	9.48e-204	-	-	-	K	-	-	-	Acetyltransferase (GNAT) family
PHCCMDOK_03594	2.78e-241	-	-	-	M	-	-	-	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
PHCCMDOK_03595	5.16e-174	-	-	-	KT	-	-	-	Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding
PHCCMDOK_03596	1.94e-244	-	-	-	EGP	-	-	-	MFS/sugar transport protein
PHCCMDOK_03597	1.24e-148	-	-	-	S	-	-	-	Protein of unknown function (DUF2812)
PHCCMDOK_03598	8.76e-67	-	-	-	K	-	-	-	Transcriptional regulator PadR-like family
PHCCMDOK_03599	2.81e-74	yqjZ	-	-	S	-	-	-	enzyme involved in biosynthesis of extracellular polysaccharides
PHCCMDOK_03600	1.51e-34	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix domain
PHCCMDOK_03601	1.23e-95	-	-	-	-	-	-	-	-
PHCCMDOK_03602	5.01e-106	gerQ	-	-	S	ko:K06305	-	ko00000	Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA
PHCCMDOK_03603	6.58e-101	cwlJ	3.5.1.28	-	M	ko:K01449	-	ko00000,ko01000	Cell wall
PHCCMDOK_03604	7.33e-163	-	-	-	-	-	-	-	-
PHCCMDOK_03605	9.31e-84	-	-	-	K	ko:K07979	-	ko00000,ko03000	helix_turn_helix gluconate operon transcriptional repressor
PHCCMDOK_03606	1.46e-207	natA1	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
PHCCMDOK_03607	6.98e-210	yhaQ	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PHCCMDOK_03608	3.05e-245	yhaP	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	COG1668 ABC-type Na efflux pump, permease component
PHCCMDOK_03609	3.16e-64	-	-	-	-	-	-	-	-
PHCCMDOK_03610	5.82e-180	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PHCCMDOK_03611	2.61e-184	ywfI	-	-	C	ko:K00435	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko01000	May function as heme-dependent peroxidase
PHCCMDOK_03612	4.29e-180	-	5.3.3.18	-	I	ko:K15866	ko00360,ko01120,map00360,map01120	ko00000,ko00001,ko01000	Belongs to the enoyl-CoA hydratase isomerase family
PHCCMDOK_03613	4.3e-231	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	In Salmonella this enzyme is required for ethanolamine catabolism
PHCCMDOK_03614	7.65e-185	lipL	2.3.1.200, 2.3.1.204	-	H	ko:K16869,ko:K18821	-	ko00000,ko01000	Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes
PHCCMDOK_03615	9.03e-264	gltP	-	-	C	-	-	-	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PHCCMDOK_03616	0.0	ywfO	-	-	S	ko:K06885	-	ko00000	COG1078 HD superfamily phosphohydrolases
PHCCMDOK_03617	1.3e-115	ywgA	-	-	-	ko:K09388	-	ko00000	-
PHCCMDOK_03619	4.6e-56	cotF	-	-	M	ko:K06329	-	ko00000	Spore coat protein
PHCCMDOK_03620	6.92e-37	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	4-oxalocrotonate tautomerase
PHCCMDOK_03621	1.97e-159	-	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	COG3764 Sortase (surface protein transpeptidase)
PHCCMDOK_03622	1.39e-257	-	-	-	F	-	-	-	S-adenosylhomocysteine deaminase activity
PHCCMDOK_03623	3.38e-128	ywhD	-	-	S	-	-	-	YwhD family
PHCCMDOK_03624	0.0	-	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
PHCCMDOK_03625	1.15e-199	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PHCCMDOK_03626	0.0	pbpG	2.4.1.129, 3.4.16.4	GT51	M	ko:K21464	ko00550,map00550	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
PHCCMDOK_03627	8.83e-205	speE	2.5.1.16	-	E	ko:K00797	ko00270,ko00330,ko00410,ko00480,ko01100,map00270,map00330,map00410,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
PHCCMDOK_03628	2.02e-214	speB	3.5.3.11	-	E	ko:K01480	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the arginase family
PHCCMDOK_03629	1.89e-100	ywiB	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_03630	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
PHCCMDOK_03631	6.53e-97	-	-	-	S	ko:K09793	-	ko00000	protein conserved in bacteria
PHCCMDOK_03632	2.94e-281	clsB	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the phospholipase D family. Cardiolipin synthase subfamily
PHCCMDOK_03633	0.0	ywjF	-	-	C	-	-	-	COG0247 Fe-S oxidoreductase
PHCCMDOK_03634	1.36e-268	mmgA	2.3.1.9	-	I	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
PHCCMDOK_03635	6.82e-192	mmgB	1.1.1.157	-	I	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	ko00000,ko00001,ko01000	Dehydrogenase
PHCCMDOK_03636	2.72e-261	mmgC	-	-	I	ko:K18244	-	ko00000,ko01000	acyl-CoA dehydrogenase
PHCCMDOK_03637	4.32e-140	kstR2_2	-	-	K	-	-	-	Transcriptional regulator
PHCCMDOK_03638	3.1e-91	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PHCCMDOK_03639	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PHCCMDOK_03640	6.4e-113	ywjG	-	-	S	-	-	-	Domain of unknown function (DUF2529)
PHCCMDOK_03641	3.65e-78	spo0F	-	-	T	ko:K02490	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	response regulator
PHCCMDOK_03642	1.11e-204	fbaA	4.1.2.13	-	G	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Aldolase
PHCCMDOK_03643	8.05e-149	tal	2.2.1.2	-	G	ko:K00616	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PHCCMDOK_03644	3.54e-279	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PHCCMDOK_03645	3.14e-228	glpX	3.1.3.11	-	G	ko:K02446	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	fructose-1,6-bisphosphatase
PHCCMDOK_03646	2.94e-300	rho	-	-	K	ko:K03628	ko03018,map03018	ko00000,ko00001,ko03019,ko03021	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PHCCMDOK_03647	2.08e-54	rpmE2	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
PHCCMDOK_03648	1.27e-140	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
PHCCMDOK_03649	4.85e-97	-	-	-	-	-	-	-	-
PHCCMDOK_03650	0.0	cdr	1.11.1.1	-	P	ko:K05910	-	ko00000,ko01000	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PHCCMDOK_03651	1.04e-230	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PHCCMDOK_03652	4.19e-205	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PHCCMDOK_03653	7.81e-148	spoIIR	-	-	S	ko:K06387	-	ko00000	stage II sporulation protein R
PHCCMDOK_03654	1.36e-96	ywlB	1.20.4.1, 2.3.1.1	-	E	ko:K00537,ko:K00619	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the acetyltransferase family. ArgA subfamily
PHCCMDOK_03655	1.39e-227	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PHCCMDOK_03656	4.54e-77	-	-	-	S	-	-	-	Regulator of ribonuclease activity B
PHCCMDOK_03657	1.88e-85	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PHCCMDOK_03658	7.42e-55	-	-	-	K	-	-	-	SIS domain
PHCCMDOK_03659	1.77e-124	-	5.3.1.14, 5.3.1.5	-	M	ko:K01805,ko:K01820	ko00040,ko00051,ko01100,ko01120,map00040,map00051,map01100,map01120	ko00000,ko00001,ko01000	Xylose isomerase-like TIM barrel
PHCCMDOK_03660	1.77e-191	csbX	-	-	EGP	-	-	-	Major facilitator superfamily
PHCCMDOK_03661	1.61e-119	mntP	-	-	P	-	-	-	Probably functions as a manganese efflux pump
PHCCMDOK_03662	3.25e-92	ywlE	3.1.3.48, 3.9.1.2	-	T	ko:K01104,ko:K20201	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PHCCMDOK_03663	1.75e-183	mcpA	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	Chemotaxis
PHCCMDOK_03664	1.59e-104	rpiB	5.3.1.6	-	G	ko:K01808	ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribose 5-phosphate isomerase
PHCCMDOK_03665	1.18e-117	ywlG	-	-	S	-	-	-	Belongs to the UPF0340 family
PHCCMDOK_03666	1.99e-298	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PHCCMDOK_03667	5.5e-148	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PHCCMDOK_03668	1.76e-114	panZ	-	-	K	-	-	-	-acetyltransferase
PHCCMDOK_03669	0.0	prtS	3.4.21.110, 3.4.21.96	-	O	ko:K01361,ko:K08652,ko:K14647	ko02024,map02024	ko00000,ko00001,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
PHCCMDOK_03670	4.29e-40	-	-	-	S	-	-	-	Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter
PHCCMDOK_03671	1.25e-10	atpI	-	-	S	ko:K02116	-	ko00000,ko00194	ATP synthase I chain
PHCCMDOK_03672	3.41e-170	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
PHCCMDOK_03673	2.78e-28	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PHCCMDOK_03674	2.37e-47	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PHCCMDOK_03675	2.89e-118	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PHCCMDOK_03676	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PHCCMDOK_03677	3.39e-195	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PHCCMDOK_03678	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PHCCMDOK_03679	2.09e-81	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
PHCCMDOK_03680	1.66e-21	ywmB	-	-	S	-	-	-	TATA-box binding
PHCCMDOK_03681	1.92e-301	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PHCCMDOK_03682	4.2e-241	spoIID	-	-	D	ko:K06381	-	ko00000	Stage II sporulation protein D
PHCCMDOK_03683	1.35e-168	spoIIQ	-	-	M	ko:K06386	-	ko00000	COG0739 Membrane proteins related to metalloendopeptidases
PHCCMDOK_03684	7.24e-69	ykkC	-	-	P	ko:K18924	-	ko00000,ko00002,ko02000	Multidrug resistance protein
PHCCMDOK_03685	7.63e-59	ykkD	-	-	P	ko:K18925	-	ko00000,ko00002,ko02000	Multidrug resistance protein
PHCCMDOK_03686	1.68e-60	spoIIID	-	-	K	ko:K06283	-	ko00000,ko03000	Stage III sporulation protein D
PHCCMDOK_03687	1.9e-231	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Rod shape-determining protein
PHCCMDOK_03688	6.51e-177	flhO	-	-	N	ko:K02392	ko02040,map02040	ko00000,ko00001,ko02035	flagellar basal body
PHCCMDOK_03689	1.04e-176	flhP	-	-	N	ko:K02392	ko02040,map02040	ko00000,ko00001,ko02035	flagellar basal body
PHCCMDOK_03690	1.05e-77	-	-	-	S	-	-	-	DNA-directed RNA polymerase subunit beta
PHCCMDOK_03691	0.0	-	-	-	P	-	-	-	Spore gernimation protein GerA
PHCCMDOK_03692	1.81e-252	-	-	-	E	-	-	-	Spore germination protein
PHCCMDOK_03693	1.45e-238	-	-	-	S	ko:K06308	-	ko00000	Spore germination B3/ GerAC like, C-terminal
PHCCMDOK_03694	4.67e-139	azoR	-	-	I	ko:K01118	-	ko00000,ko01000	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PHCCMDOK_03695	5.4e-174	estA	-	CE1	S	ko:K03930	-	ko00000,ko01000	Putative esterase
PHCCMDOK_03696	1.55e-94	fabZ	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PHCCMDOK_03697	0.0	pip	-	-	S	ko:K01421	-	ko00000	YhgE Pip N-terminal domain protein
PHCCMDOK_03698	2.48e-118	-	-	-	J	-	-	-	COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
PHCCMDOK_03699	2.17e-102	yisT	-	-	S	-	-	-	DinB family
PHCCMDOK_03700	6.06e-20	-	-	-	Q	-	-	-	N-acetyltransferase
PHCCMDOK_03702	3.63e-289	lytE	-	-	M	-	-	-	NlpC/P60 family
PHCCMDOK_03703	2.08e-305	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PHCCMDOK_03704	7.3e-287	-	-	-	-	-	-	-	-
PHCCMDOK_03705	5.58e-59	yjdJ	-	-	S	ko:K06975	-	ko00000	GCN5-related N-acetyl-transferase
PHCCMDOK_03706	5.45e-207	tagU	-	-	K	-	-	-	May catalyze the final step in cell wall teichoic acid biosynthesis, the transfer of the anionic cell wall polymers (APs) from their lipid-linked precursor to the cell wall peptidoglycan (PG)
PHCCMDOK_03707	4.06e-244	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
PHCCMDOK_03708	5.07e-281	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
PHCCMDOK_03709	2.71e-116	-	-	-	G	-	-	-	Transmembrane secretion effector
PHCCMDOK_03710	9.4e-105	guaD	3.5.4.3	-	FJ	ko:K01487	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	COG0590 Cytosine adenosine deaminases
PHCCMDOK_03711	2.45e-103	-	-	-	S	-	-	-	Tetratrico peptide repeat
PHCCMDOK_03712	8.22e-217	tagU	-	-	K	-	-	-	May catalyze the final step in cell wall teichoic acid biosynthesis, the transfer of the anionic cell wall polymers (APs) from their lipid-linked precursor to the cell wall peptidoglycan (PG)
PHCCMDOK_03713	2.53e-149	ywqC	-	-	M	ko:K19420	-	ko00000	biosynthesis protein
PHCCMDOK_03714	6.06e-156	epsB	2.7.10.2	-	D	ko:K00903	-	ko00000,ko01000,ko01001	COG0489 ATPases involved in chromosome partitioning
PHCCMDOK_03715	2.49e-181	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	COG4464 Capsular polysaccharide biosynthesis protein
PHCCMDOK_03716	7.53e-94	-	-	-	S	-	-	-	An automated process has identified a potential problem with this gene model
PHCCMDOK_03717	6.03e-177	-	-	-	S	-	-	-	Protein of unknown function (DUF3100)
PHCCMDOK_03718	8.05e-196	-	1.1.1.31	-	I	ko:K00020	ko00280,ko01100,map00280,map01100	ko00000,ko00001,ko01000	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
PHCCMDOK_03719	0.0	-	-	-	C	ko:K22187	ko00040,map00040	ko00000,ko00001,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PHCCMDOK_03720	0.0	-	-	-	T	-	-	-	Domain present in phytochromes and cGMP-specific phosphodiesterases.
PHCCMDOK_03721	4.36e-227	-	-	-	S	-	-	-	Tetratricopeptide repeat
PHCCMDOK_03724	1.68e-137	glxR	1.1.1.31	-	I	ko:K00020	ko00280,ko01100,map00280,map01100	ko00000,ko00001,ko01000	3-hydroxyisobutyrate dehydrogenase
PHCCMDOK_03725	3.5e-295	-	-	-	S	-	-	-	Hypothetical glycosyl hydrolase 6
PHCCMDOK_03726	0.0	-	-	-	G	-	-	-	beta-galactosidase
PHCCMDOK_03727	4.59e-188	-	-	-	G	-	-	-	ABC-type polysaccharide transport system, permease component
PHCCMDOK_03728	1.89e-162	-	-	-	G	-	-	-	ABC transporter permease
PHCCMDOK_03729	1.19e-282	-	-	-	G	-	-	-	Bacterial extracellular solute-binding protein
PHCCMDOK_03730	0.0	-	-	-	S	-	-	-	Hypothetical glycosyl hydrolase 6
PHCCMDOK_03731	2.22e-280	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PHCCMDOK_03732	6.05e-47	-	-	-	S	-	-	-	Integral membrane protein
PHCCMDOK_03733	2.49e-80	-	-	-	F	-	-	-	PFAM AIG2 family protein
PHCCMDOK_03734	0.0	-	-	-	E	-	-	-	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PHCCMDOK_03735	5.04e-297	-	3.5.1.6, 3.5.1.87	-	E	ko:K06016	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases
PHCCMDOK_03736	3.91e-09	-	-	-	-	-	-	-	-
PHCCMDOK_03737	0.0	hydA	3.5.2.2	-	F	ko:K01464	ko00240,ko00410,ko00770,ko00983,ko01100,map00240,map00410,map00770,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Amidohydrolase family
PHCCMDOK_03738	7.46e-297	preA	1.3.1.1	-	CF	ko:K17723	ko00240,ko00410,ko00770,ko01100,map00240,map00410,map00770,map01100	ko00000,ko00001,ko00002,ko01000	dihydroorotate dehydrogenase
PHCCMDOK_03739	0.0	gltD	1.3.1.1	-	E	ko:K17722	ko00240,ko00410,ko00770,ko01100,map00240,map00410,map00770,map01100	ko00000,ko00001,ko00002,ko01000	COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases
PHCCMDOK_03740	1.1e-77	-	-	-	K	-	-	-	DeoR C terminal sensor domain
PHCCMDOK_03741	3.04e-169	-	4.1.2.13	-	G	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-bisphosphate aldolase class-II
PHCCMDOK_03742	7.71e-64	-	2.7.1.202	-	G	ko:K02768	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PHCCMDOK_03743	3.1e-45	-	-	-	G	-	-	-	PTS system, Lactose/Cellobiose specific IIB subunit
PHCCMDOK_03744	4.61e-190	-	-	-	G	ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	Phosphotransferase system, EIIC
PHCCMDOK_03745	4.23e-95	-	5.3.1.15	-	S	ko:K09988	ko00040,map00040	ko00000,ko00001,ko01000	Pfam:DUF1498
PHCCMDOK_03746	7.55e-153	-	-	-	G	-	-	-	Dak1 domain
PHCCMDOK_03747	9.4e-67	-	-	-	G	-	-	-	Ribose/Galactose Isomerase
PHCCMDOK_03748	2.04e-63	-	-	-	G	-	-	-	Ribose/Galactose Isomerase
PHCCMDOK_03749	1.77e-94	-	5.3.1.1	-	J	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Triosephosphate isomerase
PHCCMDOK_03750	5e-100	-	-	-	-	-	-	-	-
PHCCMDOK_03752	2.12e-27	tnpB	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PHCCMDOK_03753	6.11e-27	-	-	-	-	-	-	-	-
PHCCMDOK_03754	1.46e-117	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PHCCMDOK_03755	4.68e-158	-	-	-	K	ko:K13653	-	ko00000,ko03000	AraC family transcriptional regulator
PHCCMDOK_03756	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
PHCCMDOK_03757	2.31e-175	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PHCCMDOK_03758	2.95e-205	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_03759	1.87e-220	-	-	-	G	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_03760	0.0	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PHCCMDOK_03761	1.98e-175	kipI	-	-	E	ko:K06351	-	ko00000	Allophanate hydrolase subunit 1
PHCCMDOK_03762	6.8e-227	kipA	-	-	E	ko:K06350	-	ko00000	Allophanate hydrolase subunit 2
PHCCMDOK_03763	2.25e-267	ycsG	-	-	P	-	-	-	COG1914 Mn2 and Fe2 transporters of the NRAMP family
PHCCMDOK_03764	1.13e-171	ycsF	-	-	S	ko:K07160	-	ko00000	Belongs to the UPF0271 (lamB) family
PHCCMDOK_03765	4.77e-12	-	-	-	-	-	-	-	-
PHCCMDOK_03766	8.24e-144	-	-	-	P	-	-	-	Pyridine nucleotide-disulphide oxidoreductase
PHCCMDOK_03767	7.32e-79	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PHCCMDOK_03768	2.7e-145	ydgI	-	-	C	-	-	-	nitroreductase
PHCCMDOK_03769	3.33e-284	alr	5.1.1.1, 5.1.1.5	-	E	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PHCCMDOK_03770	4.38e-35	ndoAI	-	-	K	ko:K07723	-	ko00000,ko02048,ko03000	transcriptional regulators containing the CopG Arc MetJ DNA-binding domain and a metal-binding domain
PHCCMDOK_03771	8.86e-74	ndoA	-	-	L	ko:K07171	-	ko00000,ko01000,ko02048	Toxic component of a toxin-antitoxin (TA) module
PHCCMDOK_03772	2.86e-179	rsbR	-	-	T	ko:K17763	-	ko00000,ko03021	Positive regulator of sigma-B
PHCCMDOK_03773	2.21e-69	rsbS	-	-	T	ko:K17762	-	ko00000,ko03021	antagonist
PHCCMDOK_03774	5.84e-95	rsbT	2.7.11.1	-	T	ko:K17752	-	ko00000,ko01000,ko01001,ko03021	COG2172 Anti-sigma regulatory factor (Ser Thr protein kinase)
PHCCMDOK_03775	6.63e-234	rsbU	3.1.3.3	-	KT	ko:K07315	-	ko00000,ko01000,ko03021	phosphatase
PHCCMDOK_03776	1.39e-70	rsbV	-	-	T	ko:K04749	-	ko00000,ko03021	Belongs to the anti-sigma-factor antagonist family
PHCCMDOK_03777	6.56e-107	rsbW	2.7.11.1	-	T	ko:K04757	-	ko00000,ko01000,ko01001,ko03021	Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B)
PHCCMDOK_03778	1.49e-180	sigB	-	-	K	ko:K03090	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PHCCMDOK_03779	1.15e-144	rsbX	3.1.3.3	-	KT	ko:K05518	-	ko00000,ko01000,ko03021	Sigma factor PP2C-like phosphatases
PHCCMDOK_03780	0.0	tex	-	-	K	ko:K06959	-	ko00000	COG2183 Transcriptional accessory protein
PHCCMDOK_03781	3.43e-13	-	-	-	-	-	-	-	-
PHCCMDOK_03782	1.4e-114	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
PHCCMDOK_03790	3.12e-123	yokH	-	-	G	-	-	-	SMI1 / KNR4 family
PHCCMDOK_03791	3.55e-59	-	-	-	KQ	-	-	-	helix_turn_helix, mercury resistance
PHCCMDOK_03792	4.21e-126	yrkC	-	-	G	-	-	-	Cupin domain
PHCCMDOK_03793	3.25e-126	-	-	-	S	-	-	-	TraX protein
PHCCMDOK_03794	8.78e-30	-	-	-	S	-	-	-	Protein of unknown function (DUF1648)
PHCCMDOK_03795	6.91e-180	glvR	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
PHCCMDOK_03796	0.0	malP	2.7.1.208	-	G	ko:K02749,ko:K02750	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHCCMDOK_03797	0.0	malH	3.2.1.122	GH4	G	ko:K01232	ko00500,map00500	ko00000,ko00001,ko01000	COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
PHCCMDOK_03798	0.0	-	-	-	C	-	-	-	FAD dependent oxidoreductase
PHCCMDOK_03799	9.39e-192	ugpE3	-	-	G	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_03800	1.22e-219	-	-	-	U	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_03801	1.27e-314	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PHCCMDOK_03802	0.0	-	2.7.13.3	-	T	ko:K07718	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHCCMDOK_03803	1.75e-173	-	-	-	T	ko:K07720	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	helix_turn_helix, arabinose operon control protein
PHCCMDOK_03804	0.0	-	-	-	G	-	-	-	beta-fructofuranosidase activity
PHCCMDOK_03805	4.1e-193	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Peptidase family M48
PHCCMDOK_03806	3.52e-124	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
PHCCMDOK_03807	1.97e-275	yngJ	1.3.8.1	-	I	ko:K00248	ko00071,ko00280,ko00650,ko01100,ko01110,ko01120,ko01200,ko01212,map00071,map00280,map00650,map01100,map01110,map01120,map01200,map01212	ko00000,ko00001,ko01000	acyl-CoA dehydrogenase
PHCCMDOK_03808	0.0	yngH	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Biotin carboxylase
PHCCMDOK_03809	3.93e-41	-	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	Biotin carboxyl carrier protein
PHCCMDOK_03810	1.59e-171	yngF	-	-	I	-	-	-	Belongs to the enoyl-CoA hydratase isomerase family
PHCCMDOK_03811	0.0	yngE	-	-	I	-	-	-	COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
PHCCMDOK_03813	3.96e-274	-	-	-	-	-	-	-	-
PHCCMDOK_03814	8.53e-102	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
PHCCMDOK_03815	8.44e-262	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHCCMDOK_03816	1.11e-204	lrp	-	-	QT	-	-	-	PucR C-terminal helix-turn-helix domain
PHCCMDOK_03817	1.3e-218	scrR	-	-	K	ko:K03484	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PHCCMDOK_03818	0.0	scrB	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
PHCCMDOK_03819	0.0	scrA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PHCCMDOK_03820	3.84e-231	-	-	-	K	-	-	-	Transcriptional regulator
PHCCMDOK_03821	2.18e-157	fabG	1.1.1.100	-	S	ko:K00059,ko:K07124	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the short-chain dehydrogenases reductases (SDR) family
PHCCMDOK_03822	9.22e-304	-	-	-	G	-	-	-	Tripartite ATP-independent periplasmic transporter, DctM component
PHCCMDOK_03823	3.3e-43	-	-	-	-	-	-	-	-
PHCCMDOK_03824	4.34e-151	-	4.1.3.17	-	H	ko:K10218	ko00362,ko00660,ko01120,map00362,map00660,map01120	ko00000,ko00001,ko01000	Methyltransferase
PHCCMDOK_03825	1.7e-199	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
PHCCMDOK_03826	5.87e-197	-	-	-	I	-	-	-	Domain of unknown function (DUF1932)
PHCCMDOK_03827	1.22e-216	-	-	-	IQ	-	-	-	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PHCCMDOK_03828	1.41e-215	-	-	-	K	-	-	-	WYL domain
PHCCMDOK_03829	9.49e-143	-	1.15.1.1	-	P	ko:K04565	ko04146,ko04213,ko05014,ko05016,ko05020,map04146,map04213,map05014,map05016,map05020	ko00000,ko00001,ko01000	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
PHCCMDOK_03830	1.44e-195	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PHCCMDOK_03831	1.43e-201	czcD	-	-	P	ko:K16264	-	ko00000,ko02000	COG1230 Co Zn Cd efflux system component
PHCCMDOK_03832	4.85e-65	czrA	-	-	K	ko:K22043	-	ko00000,ko03000	transcriptional
PHCCMDOK_03833	5.54e-212	gltC	-	-	K	ko:K09681	-	ko00000,ko03000	Transcriptional regulator
PHCCMDOK_03834	0.0	gdhA	1.4.1.2, 1.4.1.4	-	E	ko:K00260,ko:K00262	ko00220,ko00250,ko00430,ko00910,ko01100,map00220,map00250,map00430,map00910,map01100	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
PHCCMDOK_03835	4.37e-213	mviM3	-	-	S	ko:K03810	-	ko00000	Oxidoreductase family, NAD-binding Rossmann fold
PHCCMDOK_03836	7.23e-40	cspL	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock
PHCCMDOK_03837	1.91e-98	ydeB	-	-	K	ko:K07736	-	ko00000,ko03000	Transcription factor
PHCCMDOK_03838	2.26e-65	arsR	-	-	K	ko:K03892	-	ko00000,ko03000	ArsR family transcriptional regulator
PHCCMDOK_03839	1.86e-86	cadI	4.4.1.5	-	E	ko:K01759	ko00620,map00620	ko00000,ko00001,ko01000	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PHCCMDOK_03840	9.94e-71	arsR	-	-	K	ko:K03892,ko:K22043	-	ko00000,ko03000	transcriptional
PHCCMDOK_03841	1.61e-277	ydfA	-	-	P	ko:K03893	-	ko00000,ko02000	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
PHCCMDOK_03842	2.71e-98	arsC	1.20.4.1	-	T	ko:K03741	-	ko00000,ko01000	Catalyzes the reduction of arsenate As(V) to arsenite As(III)
PHCCMDOK_03844	7.9e-296	oxdD	4.1.1.2	-	G	ko:K01569	ko00630,ko01100,map00630,map01100	ko00000,ko00001,ko01000	Oxalate decarboxylase
PHCCMDOK_03845	6.41e-28	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PHCCMDOK_03846	9.07e-13	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PHCCMDOK_03847	1.36e-243	bdhA	1.1.1.264, 1.1.1.303, 1.1.1.4	-	E	ko:K00004,ko:K00098	ko00650,map00650	ko00000,ko00001,ko01000	Dehydrogenase
PHCCMDOK_03848	6.66e-135	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
PHCCMDOK_03849	0.0	gsiB_3	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0747 ABC-type dipeptide transport system, periplasmic component
PHCCMDOK_03850	1.22e-09	-	-	-	S	-	-	-	Protein of unknown function (Tiny_TM_bacill)
PHCCMDOK_03852	1.62e-11	-	-	-	-	-	-	-	-
PHCCMDOK_03853	1.91e-89	-	-	-	V	ko:K07451	-	ko00000,ko01000,ko02048	HNH endonuclease
PHCCMDOK_03857	1.24e-87	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PHCCMDOK_03859	1.57e-75	-	-	-	-	-	-	-	-
PHCCMDOK_03860	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PHCCMDOK_03861	1.77e-112	-	-	-	-	-	-	-	-
PHCCMDOK_03862	0.0	cstA	-	-	T	ko:K06200	-	ko00000	Carbon starvation protein
PHCCMDOK_03863	1.3e-236	-	-	-	V	-	-	-	Domain of unknown function (DUF3471)
PHCCMDOK_03864	3.17e-86	puuR	-	-	K	-	-	-	sequence-specific DNA binding
PHCCMDOK_03865	4.24e-89	puuR	-	-	K	-	-	-	sequence-specific DNA binding
PHCCMDOK_03869	7.59e-98	-	-	-	M	-	-	-	n-acetylmuramoyl-L-alanine amidase
PHCCMDOK_03870	1.02e-16	hol	-	-	S	-	-	-	COG5546 Small integral membrane protein
PHCCMDOK_03871	2.02e-27	-	-	-	-	-	-	-	-
PHCCMDOK_03874	6.13e-27	-	-	-	-	-	-	-	-
PHCCMDOK_03875	8.05e-34	-	-	-	-	-	-	-	-
PHCCMDOK_03876	3.34e-244	-	-	-	C	-	-	-	Catalyzes the reduction of the double bond of an array of alpha,beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes
PHCCMDOK_03877	9.3e-275	-	-	-	E	-	-	-	Peptidase family M28
PHCCMDOK_03878	1.7e-134	yhfK	-	-	GM	-	-	-	NmrA-like family
PHCCMDOK_03879	1.57e-227	ytvI	-	-	S	-	-	-	AI-2E family transporter
PHCCMDOK_03880	2.69e-117	copC	-	-	S	ko:K07156	-	ko00000,ko02000	CopC domain
PHCCMDOK_03882	3.35e-248	yhdY	-	-	M	ko:K16052	-	ko00000,ko02000	Mechanosensitive ion channel
PHCCMDOK_03883	1.62e-232	-	-	-	T	-	-	-	Metal dependent phosphohydrolases with conserved 'HD' motif.
PHCCMDOK_03884	5.05e-186	-	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
PHCCMDOK_03885	5.61e-115	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PHCCMDOK_03886	5.51e-282	-	2.6.1.11, 2.6.1.17	-	E	ko:K00821	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase class-III
PHCCMDOK_03887	6.04e-271	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PHCCMDOK_03888	1.46e-50	ykuS	-	-	S	-	-	-	Belongs to the UPF0180 family
PHCCMDOK_03889	3.29e-163	ykuT	-	-	M	ko:K22044	-	ko00000,ko02000	Mechanosensitive ion channel
PHCCMDOK_03890	3.15e-131	ykuU	-	-	O	-	-	-	Alkyl hydroperoxide reductase
PHCCMDOK_03891	7.23e-107	ykuV	-	-	CO	-	-	-	thiol-disulfide
PHCCMDOK_03892	2.58e-147	ktrA	-	-	P	ko:K03499	-	ko00000,ko02000	COG0569 K transport systems, NAD-binding component
PHCCMDOK_03893	0.0	rnjA	-	-	S	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PHCCMDOK_03894	1.81e-41	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
PHCCMDOK_03895	1.44e-128	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PHCCMDOK_03897	1.46e-131	ykyA	-	-	L	-	-	-	Putative cell-wall binding lipoprotein
PHCCMDOK_03898	7.59e-256	pdhA	1.2.4.1	-	C	ko:K00161	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
PHCCMDOK_03899	2.48e-227	pdhB	1.2.4.1	-	C	ko:K00162	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
PHCCMDOK_03900	6.67e-248	pdhC	2.3.1.12	-	C	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PHCCMDOK_03901	0.0	pdhD	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
PHCCMDOK_03902	2.41e-236	appD	-	-	P	ko:K02031,ko:K16202	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHCCMDOK_03903	2.61e-236	-	-	-	E	ko:K02032,ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHCCMDOK_03904	0.0	appA_2	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0747 ABC-type dipeptide transport system, periplasmic component
PHCCMDOK_03905	7.93e-222	-	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PHCCMDOK_03906	1.7e-207	-	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PHCCMDOK_03907	1.1e-85	-	-	-	CO	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	cell redox homeostasis
PHCCMDOK_03908	0.0	opuD	-	-	M	ko:K05020	-	ko00000,ko02000	Belongs to the BCCT transporter (TC 2.A.15) family
PHCCMDOK_03909	7.93e-167	pdaA_2	3.5.1.104	-	G	ko:K01567,ko:K22278	-	ko00000,ko01000	Polysaccharide deacetylase
PHCCMDOK_03910	1.88e-262	-	-	-	O	-	-	-	Peptidase family M48
PHCCMDOK_03911	0.0	speA	4.1.1.17, 4.1.1.19	-	E	ko:K01581,ko:K01585	ko00330,ko00480,ko01100,ko01110,ko01130,map00330,map00480,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Arginine
PHCCMDOK_03912	2.47e-52	yktA	-	-	S	-	-	-	Belongs to the UPF0223 family
PHCCMDOK_03913	6.15e-146	yktB	-	-	S	-	-	-	Belongs to the UPF0637 family
PHCCMDOK_03914	1.2e-194	suhB	3.1.3.25	-	G	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	ko00000,ko00001,ko00002,ko01000	Inositol monophosphatase
PHCCMDOK_03915	9.17e-210	-	1.1.1.31	-	I	ko:K00020	ko00280,ko01100,map00280,map01100	ko00000,ko00001,ko01000	COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
PHCCMDOK_03916	1.13e-17	-	-	-	S	-	-	-	Family of unknown function (DUF5325)
PHCCMDOK_03917	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
PHCCMDOK_03918	1.01e-66	ylaH	-	-	S	-	-	-	YlaH-like protein
PHCCMDOK_03919	1.3e-44	ylaI	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_03920	0.0	ylaK	-	-	T	ko:K07175	-	ko00000	ATPase related to phosphate starvation-inducible protein PhoH
PHCCMDOK_03921	3.07e-119	ylaL	-	-	S	-	-	-	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
PHCCMDOK_03922	1.92e-56	ylaN	-	-	S	-	-	-	Belongs to the UPF0358 family
PHCCMDOK_03923	0.0	pyc	6.4.1.1	-	C	ko:K01958	ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
PHCCMDOK_03924	3.05e-203	ctaA	-	-	O	ko:K02259	ko00190,ko00860,ko01100,ko01110,ko02020,ko04714,map00190,map00860,map01100,map01110,map02020,map04714	ko00000,ko00001,ko00002,ko03029	Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group
PHCCMDOK_03925	2.38e-253	ctaC	1.9.3.1	-	C	ko:K02275	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B)
PHCCMDOK_03926	0.0	ctaD	1.9.3.1	-	C	ko:K02274	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
PHCCMDOK_03927	7.21e-143	ctaE	1.9.3.1	-	C	ko:K02276	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	COG1845 Heme copper-type cytochrome quinol oxidase, subunit 3
PHCCMDOK_03928	2.95e-68	ctaF	1.9.3.1	-	C	ko:K02277	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	COG3125 Heme copper-type cytochrome quinol oxidase, subunit 4
PHCCMDOK_03929	1.87e-119	yozB	-	-	S	ko:K08976	-	ko00000	membrane
PHCCMDOK_03930	7.94e-109	-	-	-	-	-	-	-	-
PHCCMDOK_03931	7.74e-83	ylbA	-	-	S	-	-	-	YugN-like family
PHCCMDOK_03932	1.31e-248	ylbC	-	-	S	-	-	-	protein with SCP PR1 domains
PHCCMDOK_03933	1.38e-108	-	-	-	Q	ko:K02614	ko00360,map00360	ko00000,ko00001,ko01000	protein, possibly involved in aromatic compounds catabolism
PHCCMDOK_03934	1.09e-91	ylbD	-	-	S	-	-	-	Putative coat protein
PHCCMDOK_03935	7.5e-43	ylbE	-	-	S	-	-	-	YlbE-like protein
PHCCMDOK_03936	2.29e-177	-	-	-	HJ	ko:K05844	-	ko00000,ko01000,ko03009	Prokaryotic glutathione synthetase, ATP-grasp domain
PHCCMDOK_03937	6.75e-91	ylbF	-	-	S	-	-	-	Belongs to the UPF0342 family
PHCCMDOK_03938	4.89e-63	ylbG	-	-	S	-	-	-	UPF0298 protein
PHCCMDOK_03939	1.71e-83	-	-	-	S	-	-	-	Methylthioribose kinase
PHCCMDOK_03940	2.67e-124	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	Methyltransferase
PHCCMDOK_03941	7.39e-108	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PHCCMDOK_03942	1.04e-271	ylbJ	-	-	S	-	-	-	Sporulation integral membrane protein YlbJ
PHCCMDOK_03943	1.66e-177	ylbK	-	-	S	ko:K07001	-	ko00000	esterase of the alpha-beta hydrolase superfamily
PHCCMDOK_03944	2.96e-243	ylbL	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
PHCCMDOK_03945	3.06e-282	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
PHCCMDOK_03946	1.64e-119	ylbN	-	-	S	ko:K07040	-	ko00000	metal-binding, possibly nucleic acid-binding protein
PHCCMDOK_03947	7.12e-36	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
PHCCMDOK_03948	1.43e-98	ylbO	-	-	S	ko:K06314	-	ko00000,ko03000	SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
PHCCMDOK_03949	5.16e-120	ylbP	-	-	K	-	-	-	n-acetyltransferase
PHCCMDOK_03950	2.43e-187	panE	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PHCCMDOK_03952	0.0	bshC	-	-	S	ko:K22136	-	ko00000	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
PHCCMDOK_03953	4.81e-103	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
PHCCMDOK_03954	1.48e-218	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PHCCMDOK_03955	2.26e-62	ftsL	-	-	D	-	-	-	cell division protein FtsL
PHCCMDOK_03956	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
PHCCMDOK_03958	0.0	spoVD	-	-	M	ko:K08384	ko00550,map00550	ko00000,ko00001,ko01011	stage V sporulation protein D
PHCCMDOK_03959	0.0	murE	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PHCCMDOK_03960	3.53e-310	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PHCCMDOK_03961	2.84e-217	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PHCCMDOK_03962	4.79e-307	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PHCCMDOK_03963	1.47e-246	spoVE	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
PHCCMDOK_03964	4.2e-165	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PHCCMDOK_03966	4.62e-292	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PHCCMDOK_03967	3.4e-240	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PHCCMDOK_03968	2.41e-204	spoIIGA	-	-	M	ko:K06383	-	ko00000,ko01000,ko01002	aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR
PHCCMDOK_03969	8.95e-161	sigE	-	-	K	ko:K03091	-	ko00000,ko03021	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PHCCMDOK_03970	1.05e-180	sigG	-	-	K	ko:K03091	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PHCCMDOK_03971	5.13e-61	ylmC	-	-	S	-	-	-	sporulation protein
PHCCMDOK_03972	2.85e-184	ylmD	-	-	S	ko:K05810	-	ko00000,ko01000	Belongs to the multicopper oxidase YfiH RL5 family
PHCCMDOK_03973	2.77e-151	ylmE	-	-	S	ko:K06997	-	ko00000	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PHCCMDOK_03974	1.13e-91	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PHCCMDOK_03975	7.03e-58	ylmG	-	-	S	ko:K02221	-	ko00000,ko02044	membrane
PHCCMDOK_03976	3.38e-173	ylmH	-	-	S	-	-	-	conserved protein, contains S4-like domain
PHCCMDOK_03977	1.53e-95	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	Cell division initiation protein
PHCCMDOK_03978	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PHCCMDOK_03979	1.4e-140	yteA	-	-	T	-	-	-	COG1734 DnaK suppressor protein
PHCCMDOK_03980	3.71e-95	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PHCCMDOK_03981	2.76e-217	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PHCCMDOK_03982	1.55e-115	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PHCCMDOK_03983	5.35e-288	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Xanthine uracil
PHCCMDOK_03984	4.18e-207	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
PHCCMDOK_03985	6.03e-307	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PHCCMDOK_03986	2.25e-264	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
PHCCMDOK_03987	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the CarB family
PHCCMDOK_03988	4.28e-179	pyrK	-	-	C	ko:K02823	ko00240,ko01100,map00240,map01100	ko00000,ko00001	Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
PHCCMDOK_03989	2.73e-211	pyrD	1.3.1.14	-	F	ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PHCCMDOK_03990	6.75e-157	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PHCCMDOK_03991	1.64e-138	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PHCCMDOK_03992	1.54e-145	-	-	-	Q	-	-	-	ubiE/COQ5 methyltransferase family
PHCCMDOK_03994	0.0	yfhO	-	-	S	-	-	-	Bacterial membrane protein YfhO
PHCCMDOK_03995	0.0	FbpA	-	-	K	-	-	-	RNA-binding protein homologous to eukaryotic snRNP
PHCCMDOK_03996	0.0	yloB	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	COG0474 Cation transport ATPase
PHCCMDOK_03997	1.15e-52	ylzA	-	-	S	ko:K09777	-	ko00000	Belongs to the UPF0296 family
PHCCMDOK_03998	9.15e-143	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
PHCCMDOK_03999	2.67e-39	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PHCCMDOK_04000	3.81e-274	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PHCCMDOK_04001	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PHCCMDOK_04002	1.43e-224	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PHCCMDOK_04003	0.0	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PHCCMDOK_04004	5.6e-170	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
PHCCMDOK_04005	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
PHCCMDOK_04006	2.01e-210	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PHCCMDOK_04007	2.6e-149	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
PHCCMDOK_04008	4.09e-35	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
PHCCMDOK_04009	1.81e-78	yloU	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_04010	0.0	yloV	-	-	S	ko:K07030	-	ko00000	kinase related to dihydroxyacetone kinase
PHCCMDOK_04011	2.67e-191	yitS	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_04012	1.51e-155	sdaAB	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase
PHCCMDOK_04013	1.55e-195	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase
PHCCMDOK_04014	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PHCCMDOK_04015	1.53e-127	fapR	-	-	K	-	-	-	Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism
PHCCMDOK_04016	2.9e-228	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PHCCMDOK_04017	3.45e-214	fabD	2.3.1.39	-	I	ko:K00645	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	malonyl CoA-acyl carrier protein transacylase
PHCCMDOK_04018	1.16e-161	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	reductase
PHCCMDOK_04019	1.35e-42	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PHCCMDOK_04020	1.55e-177	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PHCCMDOK_04021	1.67e-14	yfkK	-	-	S	-	-	-	Belongs to the UPF0435 family
PHCCMDOK_04022	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
PHCCMDOK_04023	3.38e-226	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PHCCMDOK_04024	5.45e-68	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PHCCMDOK_04025	2.4e-312	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PHCCMDOK_04026	1.87e-57	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
PHCCMDOK_04027	1.11e-45	ylqC	-	-	S	ko:K06960	-	ko00000	Belongs to the UPF0109 family
PHCCMDOK_04028	5.04e-90	-	-	-	S	-	-	-	YlqD protein
PHCCMDOK_04029	4.94e-119	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PHCCMDOK_04030	2.12e-167	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
PHCCMDOK_04031	0.0	-	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl tRNA synthetase N terminal dom
PHCCMDOK_04032	1.35e-73	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PHCCMDOK_04037	5.89e-130	hsk	2.7.1.39	-	S	ko:K02204	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Phosphotransferase enzyme family
PHCCMDOK_04038	4.59e-68	xlyA	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	n-acetylmuramoyl-L-alanine amidase
PHCCMDOK_04040	9.99e-29	-	-	-	-	-	-	-	-
PHCCMDOK_04041	1.12e-76	yqiX	-	-	S	-	-	-	YolD-like protein
PHCCMDOK_04042	1.36e-99	ligB	6.5.1.1, 6.5.1.6, 6.5.1.7	-	L	ko:K01971,ko:K10747	ko03030,ko03410,ko03420,ko03430,ko03450,map03030,map03410,map03420,map03430,map03450	ko00000,ko00001,ko01000,ko03032,ko03400	ATP-dependent DNA ligase
PHCCMDOK_04043	3.71e-209	-	-	-	G	ko:K10118	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_04044	7.02e-182	-	-	-	G	ko:K10119	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_04045	4.53e-96	-	-	-	L	ko:K07451,ko:K07452	-	ko00000,ko01000,ko02048	HNH endonuclease
PHCCMDOK_04046	2.83e-249	-	-	-	L	ko:K07486	-	ko00000	COG3547 Transposase and inactivated derivatives
PHCCMDOK_04047	4.05e-267	-	-	-	L	ko:K07487	-	ko00000	Transposase
PHCCMDOK_04049	1.99e-85	-	-	-	L	-	-	-	Transposase
PHCCMDOK_04050	1.95e-173	-	-	-	L	-	-	-	IstB-like ATP binding protein
PHCCMDOK_04051	1.16e-214	-	-	-	K	-	-	-	Putative sugar-binding domain
PHCCMDOK_04052	2.59e-77	-	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
PHCCMDOK_04053	1.61e-229	-	2.7.1.198	-	G	ko:K02782,ko:K02783	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol sorbitol-specific transporter subunit IIB
PHCCMDOK_04054	8.78e-115	srlA	-	-	G	ko:K02783	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko02000	PTS system enzyme II sorbitol-specific factor
PHCCMDOK_04055	1.1e-88	-	-	-	K	-	-	-	Glucitol operon activator protein (GutM)
PHCCMDOK_04056	4.16e-298	-	-	-	E	-	-	-	SAF
PHCCMDOK_04057	2.31e-48	-	-	-	G	-	-	-	PTS HPr component phosphorylation site
PHCCMDOK_04058	1.51e-146	-	-	-	-	-	-	-	-
PHCCMDOK_04059	5.53e-119	-	-	-	S	-	-	-	VanZ like family
PHCCMDOK_04060	2.74e-101	yybA	-	-	K	-	-	-	transcriptional
PHCCMDOK_04061	7.8e-119	paiA	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PHCCMDOK_04062	2.46e-221	ssuA	-	-	P	ko:K02051	-	ko00000,ko00002,ko02000	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components
PHCCMDOK_04063	1.01e-133	ssuC_2	-	-	P	ko:K02050,ko:K15554	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_04064	5.7e-199	ssuB	-	-	P	ko:K02049	-	ko00000,ko00002,ko02000	COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component
PHCCMDOK_04065	0.0	glcF	-	-	C	ko:K11473	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001	Glycolate oxidase
PHCCMDOK_04066	0.0	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	Glycolate oxidase subunit
PHCCMDOK_04067	5.26e-259	cdaR_1	-	-	KT	ko:K02647	-	ko00000,ko03000	regulator
PHCCMDOK_04068	3.98e-295	yxiO	-	-	S	ko:K06902	ko04138,map04138	ko00000,ko00001,ko02000,ko04131	COG2270 Permeases of the major facilitator superfamily
PHCCMDOK_04069	1.86e-181	uppP	3.6.1.27	-	V	ko:K06153	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PHCCMDOK_04070	2.91e-228	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
PHCCMDOK_04071	1.57e-14	-	-	-	Q	ko:K02614	ko00360,map00360	ko00000,ko00001,ko01000	Thioesterase superfamily
PHCCMDOK_04072	1.3e-14	mazE	-	-	T	ko:K07172	-	ko00000,ko02048	SpoVT / AbrB like domain
PHCCMDOK_04073	1.07e-52	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
PHCCMDOK_04074	1.44e-28	topA2	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	Topoisomerase IA
PHCCMDOK_04075	0.0	-	6.2.1.1	-	I	ko:K01895	ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko01004	COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases
PHCCMDOK_04076	3.79e-13	-	-	-	-	-	-	-	-
PHCCMDOK_04077	3.69e-187	M1-276	-	-	-	-	-	-	-
PHCCMDOK_04078	3.44e-262	ysh1	-	-	J	-	-	-	Metallo-beta-lactamase superfamily
PHCCMDOK_04079	0.0	ftpA	-	-	P	ko:K02011	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_04080	6.47e-243	ftpB	-	-	P	ko:K02012	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PHCCMDOK_04081	3.28e-232	phnT	3.6.3.30	-	P	ko:K02010	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
PHCCMDOK_04082	1.59e-205	-	-	-	K	-	-	-	Transcriptional regulator
PHCCMDOK_04083	7.53e-73	-	-	-	S	-	-	-	Family of unknown function (DUF5367)
PHCCMDOK_04084	1.52e-129	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PHCCMDOK_04086	2.61e-207	-	-	-	EG	-	-	-	EamA-like transporter family
PHCCMDOK_04087	2.88e-299	ywoF	-	-	P	-	-	-	Right handed beta helix region
PHCCMDOK_04088	3.71e-122	mutT	3.6.1.13, 3.6.1.55	-	L	ko:K01515,ko:K03574	ko00230,map00230	ko00000,ko00001,ko01000,ko03400	nUDIX hydrolase
PHCCMDOK_04089	1.43e-81	-	-	-	S	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PHCCMDOK_04090	0.0	-	-	-	G	-	-	-	Bacterial extracellular solute-binding protein
PHCCMDOK_04091	2.47e-189	-	-	-	G	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_04092	5.9e-125	-	-	-	G	-	-	-	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_04093	1.95e-28	-	-	-	G	-	-	-	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_04094	3.21e-277	-	3.2.1.180	GH88	O	ko:K18581	-	ko00000,ko01000	Glycosyl Hydrolase Family 88
PHCCMDOK_04095	8.52e-212	-	-	-	K	-	-	-	AraC-like ligand binding domain
PHCCMDOK_04096	1.46e-284	-	-	-	S	-	-	-	Oxidoreductase family, C-terminal alpha/beta domain
PHCCMDOK_04097	1.93e-266	-	-	-	S	-	-	-	Oxidoreductase family, C-terminal alpha/beta domain
PHCCMDOK_04098	4.83e-129	-	-	-	K	-	-	-	AraC-like ligand binding domain
PHCCMDOK_04099	1.57e-182	inoDHR	-	-	G	-	-	-	Xylose isomerase-like TIM barrel
PHCCMDOK_04100	4.18e-200	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_04101	2.28e-219	ugpA7	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_04102	0.0	-	-	-	G	-	-	-	Bacterial extracellular solute-binding protein
PHCCMDOK_04103	2.45e-268	-	-	-	S	-	-	-	Oxidoreductase family, C-terminal alpha/beta domain
PHCCMDOK_04104	1.44e-176	-	-	-	G	-	-	-	Xylose isomerase-like TIM barrel
PHCCMDOK_04105	1.54e-217	-	-	-	K	-	-	-	Cupin domain
PHCCMDOK_04106	1.78e-241	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PHCCMDOK_04107	1.07e-77	-	-	-	S	-	-	-	Protein of unknown function, DUF393
PHCCMDOK_04108	2.74e-189	yfhB	-	-	S	-	-	-	PhzF family
PHCCMDOK_04109	1.35e-132	-	-	-	V	-	-	-	Beta-lactamase
PHCCMDOK_04110	5.59e-116	plsY1	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PHCCMDOK_04111	0.0	-	-	-	E	-	-	-	Aminotransferase class-V
PHCCMDOK_04112	0.0	-	-	-	M	-	-	-	Sulfatase
PHCCMDOK_04113	1.67e-86	-	-	-	E	ko:K07032	-	ko00000	lactoylglutathione lyase activity
PHCCMDOK_04114	9.73e-193	-	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	COG3103 SH3 domain protein
PHCCMDOK_04115	2.07e-139	-	-	-	K	-	-	-	LysR substrate binding domain
PHCCMDOK_04116	3.01e-156	-	-	-	S	-	-	-	Sulfatase-modifying factor enzyme 1
PHCCMDOK_04117	2.42e-130	-	5.1.3.9	-	G	ko:K01788	ko00520,map00520	ko00000,ko00001,ko01000	Putative N-acetylmannosamine-6-phosphate epimerase
PHCCMDOK_04118	2.48e-60	ptbA	2.7.1.199	-	G	ko:K02777,ko:K20116,ko:K20117,ko:K20118	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, glucose subfamily, IIA
PHCCMDOK_04119	1.72e-259	-	-	-	P	-	-	-	Sulfatase
PHCCMDOK_04120	9.08e-294	ptsG	2.7.1.199, 2.7.1.208	-	G	ko:K02777,ko:K02778,ko:K02779,ko:K02790,ko:K02791	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
PHCCMDOK_04121	2.17e-112	-	-	-	K	ko:K11922	-	ko00000,ko03000	Regulates the succiny-lCoA synthetase operon
PHCCMDOK_04122	1.42e-103	-	-	-	S	ko:K07090	-	ko00000	Sulfite exporter TauE/SafE
PHCCMDOK_04123	3.26e-200	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
PHCCMDOK_04124	1.34e-40	yisX	-	-	S	-	-	-	Pentapeptide repeats (9 copies)
PHCCMDOK_04125	3.03e-190	araQ	-	-	P	ko:K10190,ko:K10242	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PFAM binding-protein-dependent transport systems inner membrane component
PHCCMDOK_04126	9.42e-203	-	-	-	G	ko:K10189	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_04127	3.91e-305	-	-	-	G	ko:K10188	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PHCCMDOK_04128	3.06e-64	-	-	-	S	-	-	-	Branched-chain amino acid transport protein (AzlD)
PHCCMDOK_04129	4.95e-150	-	-	-	E	-	-	-	AzlC protein
PHCCMDOK_04130	1.19e-122	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PHCCMDOK_04131	2.48e-49	M1-753	-	-	M	-	-	-	FR47-like protein
PHCCMDOK_04133	2.15e-48	ydaS	-	-	S	-	-	-	membrane
PHCCMDOK_04134	1.8e-117	ywmF	-	-	S	-	-	-	Peptidase M50
PHCCMDOK_04135	1.24e-298	-	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
PHCCMDOK_04136	1.9e-147	ypgQ	-	-	S	ko:K06950	-	ko00000	phosphohydrolase
PHCCMDOK_04137	3.9e-35	-	-	-	-	-	-	-	-
PHCCMDOK_04138	0.0	apc3	-	-	EQ	-	-	-	Hydantoinase/oxoprolinase
PHCCMDOK_04139	1.2e-260	-	-	-	S	ko:K09703	-	ko00000	Protein of unknown function (DUF917)
PHCCMDOK_04140	1.73e-275	-	-	-	F	ko:K10974	-	ko00000,ko02000	cytosine purines uracil thiamine allantoin
PHCCMDOK_04141	1.7e-132	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PHCCMDOK_04142	2.16e-172	-	-	-	K	-	-	-	acetyltransferase
PHCCMDOK_04143	4.01e-105	-	-	-	S	ko:K06385	-	ko00000	Stage II sporulation protein P (SpoIIP)
PHCCMDOK_04144	1.81e-79	-	2.7.11.1	-	KLT	ko:K08884	-	ko00000,ko01000,ko01001	Protein kinase domain
PHCCMDOK_04145	4.93e-107	-	2.7.11.1	-	KLT	ko:K08884	-	ko00000,ko01000,ko01001	Protein kinase domain
PHCCMDOK_04146	5.62e-75	-	-	-	FG	ko:K02503	-	ko00000,ko04147	HIT domain
PHCCMDOK_04147	4.63e-209	ydhJ	-	-	S	ko:K06885	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
PHCCMDOK_04148	1.56e-114	-	-	-	-	-	-	-	-
PHCCMDOK_04150	1.62e-228	-	-	-	S	ko:K06889	-	ko00000	COG1073 Hydrolases of the alpha beta superfamily
PHCCMDOK_04151	8.69e-296	-	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_04152	0.0	-	3.5.4.28, 3.5.4.31	-	F	ko:K12960	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine
PHCCMDOK_04153	5.3e-283	-	3.5.1.6, 3.5.1.87	-	E	ko:K06016	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases
PHCCMDOK_04154	8.16e-306	hutI	3.5.2.7	-	Q	ko:K01468	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Imidazolone-5-propionate hydrolase
PHCCMDOK_04155	0.0	hutU	4.2.1.49	-	E	ko:K01712	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
PHCCMDOK_04156	0.0	-	-	-	T	-	-	-	COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
PHCCMDOK_04157	1.85e-270	-	-	-	G	-	-	-	Transmembrane secretion effector
PHCCMDOK_04158	8.66e-234	desK	2.7.13.3	-	T	ko:K07778	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHCCMDOK_04159	1.84e-133	desR	-	-	K	ko:K07693	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	helix_turn_helix, Lux Regulon
PHCCMDOK_04160	5.63e-145	-	-	-	-	-	-	-	-
PHCCMDOK_04161	1.76e-196	-	-	-	K	ko:K03488	-	ko00000,ko03000	antiterminator
PHCCMDOK_04162	0.0	nagE	2.7.1.193, 2.7.1.199	-	G	ko:K02802,ko:K02803,ko:K02804,ko:K20116,ko:K20117,ko:K20118	ko00010,ko00520,ko02060,map00010,map00520,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG1263 Phosphotransferase system IIC components, glucose maltose N-acetylglucosamine-specific
PHCCMDOK_04163	2.47e-222	-	3.4.17.13	-	V	ko:K01297	-	ko00000,ko01000,ko01002,ko01011	proteins, homologs of microcin C7 resistance protein MccF
PHCCMDOK_04164	1.25e-117	ydhK	-	-	M	-	-	-	Protein of unknown function (DUF1541)
PHCCMDOK_04165	1.02e-89	-	-	-	-	-	-	-	-
PHCCMDOK_04166	0.0	expZ	-	-	S	ko:K18231	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ABC transporter
PHCCMDOK_04167	8.17e-267	gatD	1.1.1.14, 1.1.1.251	-	C	ko:K00008,ko:K00094	ko00040,ko00051,ko00052,ko01100,map00040,map00051,map00052,map01100	ko00000,ko00001,ko00002,ko01000	Alcohol dehydrogenase GroES-like domain
PHCCMDOK_04168	1.15e-29	-	-	-	-	-	-	-	-
PHCCMDOK_04169	4.25e-248	gutB	1.1.1.14	-	E	ko:K00008	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko00002,ko01000	COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases
PHCCMDOK_04170	6.01e-287	gatC	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	COG3775 Phosphotransferase system, galactitol-specific IIC component
PHCCMDOK_04171	2.12e-56	-	2.7.1.200	-	G	ko:K02774	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
PHCCMDOK_04172	3.42e-96	-	2.7.1.200	-	GT	ko:K02773	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PHCCMDOK_04173	0.0	-	-	-	GKT	-	-	-	COG3711 Transcriptional antiterminator
PHCCMDOK_04174	0.0	zosA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	COG2217 Cation transport ATPase
PHCCMDOK_04175	1.91e-237	-	-	-	-	-	-	-	-
PHCCMDOK_04176	1.49e-133	hxlA	4.1.2.43	-	G	ko:K08093	ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	3-hexulose-6-phosphate synthase
PHCCMDOK_04177	5.61e-224	kdgK	2.7.1.45	-	G	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	COG0524 Sugar kinases, ribokinase family
PHCCMDOK_04178	8.06e-139	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PHCCMDOK_04179	4.58e-116	hxlB	5.3.1.27	-	M	ko:K08094	ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	SIS domain
PHCCMDOK_04180	2.34e-260	siaT_3	-	-	G	-	-	-	COG1593 TRAP-type C4-dicarboxylate transport system, large permease component
PHCCMDOK_04181	1.6e-109	-	-	-	G	-	-	-	Tripartite ATP-independent periplasmic transporters, DctQ component
PHCCMDOK_04182	1.22e-227	-	-	-	G	-	-	-	Bacterial extracellular solute-binding protein, family 7
PHCCMDOK_04183	8.62e-228	regR	-	-	K	ko:K02525	-	ko00000,ko03000	transcriptional
PHCCMDOK_04184	4.02e-69	-	-	-	K	ko:K10947	-	ko00000,ko03000	Transcriptional regulator PadR-like family
PHCCMDOK_04185	3.82e-95	-	-	-	-	-	-	-	-
PHCCMDOK_04186	2.95e-99	-	-	-	-	-	-	-	-
PHCCMDOK_04187	5.41e-253	ysdC_3	3.2.1.4	GH5,GH9	G	ko:K01179	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	M42 glutamyl aminopeptidase
PHCCMDOK_04188	6.91e-55	M1-485	-	-	S	-	-	-	Membrane
PHCCMDOK_04189	6.94e-70	yvdC	-	-	S	-	-	-	MazG nucleotide pyrophosphohydrolase domain
PHCCMDOK_04190	2.24e-227	tagH	3.6.3.40	-	GM	ko:K09693	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
PHCCMDOK_04191	7.71e-186	tagG	-	-	GM	ko:K09692	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transport permease protein
PHCCMDOK_04192	4.08e-176	-	-	-	S	ko:K06976	-	ko00000	GNAT acetyltransferase
PHCCMDOK_04193	0.0	-	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	COG0474 Cation transport ATPase
PHCCMDOK_04194	7.5e-75	yxiA	3.2.1.99	GH43	G	ko:K06113	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 43 family
PHCCMDOK_04195	7.76e-228	yxiA	3.2.1.99	GH43	G	ko:K06113	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 43 family
PHCCMDOK_04197	0.0	xsa	3.2.1.55	GH51	G	ko:K01209	ko00520,map00520	ko00000,ko00001,ko01000	Alpha-L-arabinofuranosidase C-terminus
PHCCMDOK_04198	9.64e-169	modA	-	-	P	ko:K02020	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0725 ABC-type molybdate transport system, periplasmic component
PHCCMDOK_04199	4.94e-141	modB	-	-	P	ko:K02018	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG4149 ABC-type molybdate transport system, permease component
PHCCMDOK_04200	5.44e-139	vraR	-	-	KT	ko:K07694,ko:K11618	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PHCCMDOK_04201	6.56e-233	vraS	2.7.13.3	-	T	ko:K07681,ko:K11617	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHCCMDOK_04202	4.96e-159	yvqF	-	-	S	ko:K11622	ko02020,map02020	ko00000,ko00001	Cell wall-active antibiotics response 4TMS YvqF
PHCCMDOK_04203	1.08e-131	-	-	-	-	-	-	-	-
PHCCMDOK_04204	3.99e-07	liaI	-	-	-	ko:K11619	ko02020,map02020	ko00000,ko00001,ko00002	-
PHCCMDOK_04205	1.05e-41	-	-	-	-	-	-	-	-
PHCCMDOK_04206	9.24e-146	-	-	-	S	-	-	-	Cupin
PHCCMDOK_04207	0.0	-	-	-	M	-	-	-	glycoside hydrolase family 81
PHCCMDOK_04208	1.72e-243	cytR	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PHCCMDOK_04209	3e-185	-	-	-	P	ko:K10242	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PFAM binding-protein-dependent transport systems inner membrane component
PHCCMDOK_04210	1.53e-199	araP	-	-	P	ko:K10189,ko:K10241,ko:K17235	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PFAM binding-protein-dependent transport systems inner membrane component
PHCCMDOK_04211	9.73e-252	-	-	-	G	ko:K10240	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PFAM extracellular solute-binding protein family 1
PHCCMDOK_04212	4.41e-155	glpF	-	-	G	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
PHCCMDOK_04213	0.0	glpK	2.7.1.30	-	C	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PHCCMDOK_04214	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PHCCMDOK_04216	4.62e-103	-	-	-	L	ko:K07491	-	ko00000	Transposase IS200 like
PHCCMDOK_04217	4.42e-97	-	-	-	-	-	-	-	-
PHCCMDOK_04219	5.4e-48	yqjY	-	-	K	ko:K06977	-	ko00000	Acetyltransferase (GNAT) domain
PHCCMDOK_04220	7.63e-221	lacC	2.7.1.144	-	G	ko:K00917	ko00052,ko01100,map00052,map01100	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family
PHCCMDOK_04221	9.72e-182	-	-	-	K	ko:K02530	-	ko00000,ko03000	COG1349 Transcriptional regulators of sugar metabolism
PHCCMDOK_04222	3.79e-101	-	2.7.1.200	-	GT	ko:K02773	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PHCCMDOK_04223	1.94e-55	-	2.7.1.200	-	G	ko:K02774	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG3414 Phosphotransferase system, galactitol-specific IIB component
PHCCMDOK_04224	2.91e-311	-	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	COG3775 Phosphotransferase system, galactitol-specific IIC component
PHCCMDOK_04225	1.08e-246	-	1.1.1.14, 1.1.1.251	-	C	ko:K00008,ko:K00094	ko00040,ko00051,ko00052,ko01100,map00040,map00051,map00052,map01100	ko00000,ko00001,ko00002,ko01000	Alcohol dehydrogenase GroES-like domain
PHCCMDOK_04226	9.81e-200	kbaY	4.1.2.13, 4.1.2.40	-	G	ko:K01624,ko:K08302	ko00010,ko00030,ko00051,ko00052,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00052,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway
PHCCMDOK_04227	7.78e-72	yyaQ	-	-	S	-	-	-	Protein conserved in bacteria
PHCCMDOK_04228	1.34e-131	folE2	3.5.4.16	-	S	ko:K09007	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Converts GTP to 7,8-dihydroneopterin triphosphate
PHCCMDOK_04229	6.31e-78	yoaS	-	-	S	-	-	-	membrane
PHCCMDOK_04230	1.23e-39	-	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
PHCCMDOK_04231	7.52e-176	yoaT	-	-	S	-	-	-	Protein of unknown function (DUF817)
PHCCMDOK_04233	4.14e-26	uppS	2.5.1.31	-	I	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PHCCMDOK_04234	1.81e-114	-	-	-	K	-	-	-	Helix-turn-helix domain
PHCCMDOK_04235	6.39e-199	rspA	4.2.1.8	-	M	ko:K08323	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the mandelate racemase muconate lactonizing enzyme family
PHCCMDOK_04236	1.66e-129	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
PHCCMDOK_04237	1.73e-70	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PHCCMDOK_04239	1.71e-311	-	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
PHCCMDOK_04240	1.12e-181	-	-	-	P	ko:K02033	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_04241	2.07e-170	-	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	N-terminal TM domain of oligopeptide transport permease C
PHCCMDOK_04242	1.62e-179	-	-	-	P	ko:K02031,ko:K15583,ko:K16202	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHCCMDOK_04243	4.28e-192	-	-	-	E	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PHCCMDOK_04244	1.83e-171	-	3.4.17.11	-	E	ko:K01295	-	ko00000,ko01000,ko01002	Peptidase dimerisation domain
PHCCMDOK_04245	0.0	yvcC1	3.6.3.44	-	V	ko:K02021,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter
PHCCMDOK_04246	4.11e-222	XK27_06795	-	-	K	ko:K20391	ko02024,map02024	ko00000,ko00001,ko03000	sequence-specific DNA binding
PHCCMDOK_04248	0.0	bsaB	-	-	S	ko:K20483	ko02020,ko02024,map02020,map02024	ko00000,ko00001	Lantibiotic dehydratase, C terminus
PHCCMDOK_04249	0.0	spaC1	-	-	V	ko:K20484	ko02020,ko02024,map02020,map02024	ko00000,ko00001	Lanthionine synthetase C-like protein
PHCCMDOK_04250	1.37e-134	-	-	-	H	-	-	-	Flavoprotein
PHCCMDOK_04251	1.49e-165	pstB13	-	-	V	-	-	-	AAA domain, putative AbiEii toxin, Type IV TA system
PHCCMDOK_04252	2.99e-166	-	-	-	S	-	-	-	ABC-2 family transporter protein
PHCCMDOK_04253	3.62e-169	-	-	-	-	-	-	-	-
PHCCMDOK_04254	1.63e-161	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
PHCCMDOK_04255	0.0	-	2.7.13.3	-	T	ko:K20487	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PHCCMDOK_04256	3.06e-42	VVA1313	-	-	GM	-	-	-	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
PHCCMDOK_04258	5.19e-86	-	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Helix-hairpin-helix motif
PHCCMDOK_04260	6.06e-224	-	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Inosine-uridine preferring nucleoside hydrolase
PHCCMDOK_04261	6.64e-233	rbsR	-	-	K	ko:K02529	-	ko00000,ko03000	transcriptional
PHCCMDOK_04262	2.69e-197	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PHCCMDOK_04263	2.58e-80	rbsD	5.4.99.62	-	G	ko:K06726	ko02010,map02010	ko00000,ko00001,ko01000	Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PHCCMDOK_04264	0.0	rbsA	3.6.3.17	-	G	ko:K10441	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system
PHCCMDOK_04265	2.68e-205	rbsC	-	-	G	ko:K10440	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PHCCMDOK_04266	5.65e-206	rbsB	-	-	G	ko:K10439	ko02010,ko02030,map02010,map02030	ko00000,ko00001,ko00002,ko02000	COG1879 ABC-type sugar transport system, periplasmic component
PHCCMDOK_04267	4.61e-149	-	-	-	-	-	-	-	-
PHCCMDOK_04268	0.0	-	-	-	-	-	-	-	-
PHCCMDOK_04271	1.64e-98	-	-	-	-	-	-	-	-
PHCCMDOK_04272	4.25e-85	-	-	-	K	-	-	-	Transcriptional regulator
PHCCMDOK_04273	7.46e-120	-	-	-	-	-	-	-	-
PHCCMDOK_04274	0.0	-	-	-	-	-	-	-	-
PHCCMDOK_04275	1.69e-71	-	-	-	-	-	-	-	-
PHCCMDOK_04276	3.01e-216	-	-	-	S	-	-	-	Choline/ethanolamine kinase
PHCCMDOK_04277	7.91e-115	ykuD	-	-	S	-	-	-	protein conserved in bacteria
PHCCMDOK_04278	5.33e-268	-	-	-	S	-	-	-	Erythromycin esterase
PHCCMDOK_04279	4.24e-239	-	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis protein
PHCCMDOK_04280	1.81e-170	-	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
PHCCMDOK_04281	0.0	-	-	-	E	-	-	-	Sodium:solute symporter family
PHCCMDOK_04282	1.83e-237	-	-	-	E	-	-	-	Amidinotransferase
PHCCMDOK_04283	1.29e-235	ybfP	-	-	K	ko:K13653	-	ko00000,ko03000	Transcriptional regulator
PHCCMDOK_04284	7.4e-193	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
PHCCMDOK_04285	3.28e-129	-	-	-	S	-	-	-	ABC-2 family transporter protein
PHCCMDOK_04286	9.78e-190	-	-	-	K	-	-	-	Transcriptional regulator
PHCCMDOK_04287	1.61e-193	yxxF	-	-	EG	-	-	-	EamA-like transporter family
PHCCMDOK_04288	1.24e-234	lacR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
PHCCMDOK_04289	3.17e-298	cycB	-	-	G	ko:K02027,ko:K15770,ko:K17237	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG2182 Maltose-binding periplasmic proteins domains
PHCCMDOK_04290	5.15e-306	malC	-	-	P	ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1175 ABC-type sugar transport systems, permease components
PHCCMDOK_04291	3.1e-185	malG	-	-	P	ko:K15772	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	transport
PHCCMDOK_04292	8e-296	yvfO	3.2.1.89	-	G	ko:K01224	-	ko00000,ko01000	arabinogalactan
PHCCMDOK_04293	0.0	lacA	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	beta-galactosidase
PHCCMDOK_04294	1.4e-164	rapA	-	-	S	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	ko00000,ko00001,ko01000	Response regulator aspartate phosphatase
PHCCMDOK_04296	2.5e-116	-	-	-	S	-	-	-	DinB superfamily
PHCCMDOK_04297	1.39e-257	-	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Peptidase dimerisation domain
PHCCMDOK_04298	9.31e-251	-	6.3.5.5	-	S	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	ATP-grasp domain
PHCCMDOK_04299	3.12e-85	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PHCCMDOK_04300	3.44e-72	-	-	-	S	-	-	-	Domain of unknown function (DUF4260)
PHCCMDOK_04301	1.24e-198	-	2.1.1.184	-	J	ko:K00561	-	br01600,ko00000,ko01000,ko01504,ko03009	Ribosomal RNA adenine dimethylases
PHCCMDOK_04302	3.01e-09	gsiB	-	-	S	ko:K06884	-	ko00000	general stress protein
PHCCMDOK_04303	7.41e-131	-	3.5.1.124	-	S	ko:K05520	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
PHCCMDOK_04305	1.5e-196	-	4.1.2.13	-	G	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-bisphosphate aldolase class-II
PHCCMDOK_04306	8.15e-270	-	-	-	S	ko:K03475	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	PTS system ascorbate-specific transporter subunit IIC
PHCCMDOK_04307	1.07e-58	-	2.7.1.194	-	G	ko:K02822	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG3414 Phosphotransferase system, galactitol-specific IIB component
PHCCMDOK_04308	4.89e-218	-	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PHCCMDOK_04309	0.0	-	-	-	GKT	-	-	-	Mga helix-turn-helix domain
PHCCMDOK_04310	2.22e-82	-	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PHCCMDOK_04311	0.0	-	-	-	S	-	-	-	Chlorophyllase enzyme
PHCCMDOK_04312	1.38e-171	bceA	-	-	V	ko:K02003,ko:K11631,ko:K19079	ko01503,ko02010,ko02020,ko05150,map01503,map02010,map02020,map05150	ko00000,ko00001,ko00002,ko01504,ko02000	ABC transporter, ATP-binding protein
PHCCMDOK_04313	0.0	bceB	-	-	V	ko:K11632,ko:K19080	ko01503,ko02010,ko02020,ko05150,map01503,map02010,map02020,map05150	ko00000,ko00001,ko00002,ko01504,ko02000	ABC transporter (permease)
PHCCMDOK_04314	4.13e-239	gerKC	-	-	S	-	-	-	Spore germination B3/ GerAC like, C-terminal
PHCCMDOK_04315	3.89e-228	gerKB	-	-	E	-	-	-	Spore germination protein
PHCCMDOK_04316	4.07e-241	gerKA	-	-	EG	ko:K06295	-	ko00000	Spore germination protein
PHCCMDOK_04317	5e-11	gerKA	-	-	EG	ko:K06295	-	ko00000	Spore germination protein
PHCCMDOK_04318	1.23e-198	-	-	-	-	-	-	-	-
PHCCMDOK_04319	3.97e-226	ectD	1.14.11.55	-	Q	ko:K10674	ko00260,ko01120,map00260,map01120	ko00000,ko00001,ko01000	Phytanoyl-CoA dioxygenase (PhyH)
PHCCMDOK_04320	1.65e-225	-	-	-	G	-	-	-	COG1593 TRAP-type C4-dicarboxylate transport system, large permease component
PHCCMDOK_04321	7.82e-59	-	-	-	G	-	-	-	Tripartite ATP-independent periplasmic transporters, DctQ component
PHCCMDOK_04322	1.52e-160	-	-	-	G	-	-	-	Bacterial extracellular solute-binding protein, family 7
PHCCMDOK_04323	4.83e-102	-	-	-	K	-	-	-	Transcriptional regulator
PHCCMDOK_04324	0.0	ybbB	-	-	K	ko:K21701	-	ko00000,ko03000	COG2207 AraC-type DNA-binding domain-containing proteins
PHCCMDOK_04325	1.47e-219	feuA	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Iron-uptake system-binding protein
PHCCMDOK_04326	6.04e-228	feuB	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PHCCMDOK_04327	2.4e-233	feuC	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PHCCMDOK_04328	3.7e-192	yuiI	-	-	S	ko:K07017	-	ko00000	Putative esterase
PHCCMDOK_04329	3.48e-304	amaB_2	3.5.3.9	-	E	ko:K02083	ko00230,ko01120,map00230,map01120	ko00000,ko00001,ko01000,ko01002	COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases
PHCCMDOK_04330	1.32e-153	-	-	-	KT	-	-	-	Forkhead associated domain
PHCCMDOK_04331	2.71e-197	-	3.5.2.6	-	V	ko:K17838	ko01501,map01501	ko00000,ko00001,ko01000	beta-lactamase
PHCCMDOK_04332	2.82e-168	-	-	-	S	-	-	-	Nucleotidyltransferase domain
PHCCMDOK_04333	4.07e-292	hemAT	-	-	NT	ko:K06595	-	ko00000,ko02035	chemotaxis protein
PHCCMDOK_04334	2.13e-232	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PHCCMDOK_04335	1.02e-195	dkgB	-	-	S	-	-	-	Aldo/keto reductase family
PHCCMDOK_04336	7.52e-215	fhuD	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PHCCMDOK_04337	2.69e-183	-	-	-	K	-	-	-	Helix-turn-helix domain
PHCCMDOK_04338	2.78e-73	-	-	-	S	-	-	-	Ketosteroid isomerase-related protein
PHCCMDOK_04339	5.68e-235	-	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator, LacI family
PHCCMDOK_04340	2.4e-230	-	-	-	S	-	-	-	Oxidoreductase family, C-terminal alpha/beta domain
PHCCMDOK_04341	9.41e-278	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PHCCMDOK_04342	6.21e-214	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_04343	8.85e-181	-	-	-	G	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PHCCMDOK_04344	1.72e-243	-	-	-	G	-	-	-	Xylose isomerase
PHCCMDOK_04345	1.87e-197	-	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
PHCCMDOK_04347	3.32e-91	-	-	-	K	ko:K11618	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
PHCCMDOK_04348	3.36e-37	-	-	-	K	ko:K11618	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
PHCCMDOK_04349	2.5e-79	-	-	-	-	-	-	-	-
PHCCMDOK_04350	2.9e-31	-	-	-	-	-	-	-	-
PHCCMDOK_04351	8.81e-114	-	1.8.5.2	-	S	ko:K16937	ko00920,ko01120,map00920,map01120	ko00000,ko00001,ko01000	DoxX
PHCCMDOK_04352	0.0	-	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PHCCMDOK_04353	7.99e-190	yojH	-	-	T	ko:K17763	-	ko00000,ko03021	COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PHCCMDOK_04354	2.16e-130	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PHCCMDOK_04355	7.79e-142	yqeB	-	-	-	-	-	-	-
PHCCMDOK_04356	4.36e-68	-	-	-	K	ko:K10947	-	ko00000,ko03000	PadR family transcriptional regulator
PHCCMDOK_04357	2.4e-118	-	-	-	V	-	-	-	(ABC) transporter
PHCCMDOK_04358	5.11e-209	-	-	-	V	-	-	-	VanW like protein
PHCCMDOK_04360	4.2e-158	yoqW	-	-	S	-	-	-	Belongs to the SOS response-associated peptidase family
PHCCMDOK_04361	1.43e-224	isp	-	-	O	ko:K13275	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
PHCCMDOK_04362	6.25e-207	yjlA	-	-	EG	-	-	-	Putative multidrug resistance efflux transporter
PHCCMDOK_04363	0.0	-	-	-	-	-	-	-	-
PHCCMDOK_04365	6.41e-210	-	-	-	M	-	-	-	3D domain
PHCCMDOK_04366	4.53e-206	-	-	-	M	-	-	-	3D domain
PHCCMDOK_04367	2.79e-165	yodH	-	-	Q	-	-	-	Methyltransferase
PHCCMDOK_04368	0.0	gnd	1.1.1.343, 1.1.1.44	-	G	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PHCCMDOK_04369	8.36e-115	-	-	-	S	-	-	-	Protein of unknown function (DUF1706)
PHCCMDOK_04370	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PHCCMDOK_04371	3.03e-68	-	-	-	-	-	-	-	-
PHCCMDOK_04372	6.31e-172	-	-	-	Q	-	-	-	Methyltransferase domain
PHCCMDOK_04373	4.81e-94	yyaT	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
PHCCMDOK_04374	3.33e-51	-	-	-	-	-	-	-	-
PHCCMDOK_04375	6.88e-297	hint	6.5.1.3	-	S	ko:K14415	-	ko00000,ko01000,ko03016	tRNA-splicing ligase RtcB
PHCCMDOK_04376	9.9e-105	-	-	-	M	-	-	-	Acetyltransferase (GNAT) domain
PHCCMDOK_04377	1.38e-97	mgsA	4.2.3.3	-	G	ko:K01734	ko00640,ko01120,map00640,map01120	ko00000,ko00001,ko01000	methylglyoxal synthase
PHCCMDOK_04378	3.39e-183	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PHCCMDOK_04379	7.73e-79	ypjD	-	-	S	-	-	-	Nucleotide pyrophosphohydrolase
PHCCMDOK_04380	1.62e-256	-	-	-	L	ko:K07496	-	ko00000	Transposase
PHCCMDOK_04381	9.08e-201	ypjC	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2179)
PHCCMDOK_04382	4.22e-269	tcaB	-	-	EGP	ko:K07552	-	ko00000,ko02000	-transporter
PHCCMDOK_04383	1.21e-151	yugP	-	-	S	ko:K06973	-	ko00000	Zn-dependent protease
PHCCMDOK_04384	1.82e-179	-	-	-	S	-	-	-	Sporulation protein YpjB (SpoYpjB)
PHCCMDOK_04385	2.87e-138	ypjA	-	-	S	-	-	-	membrane
PHCCMDOK_04386	3.57e-191	qcrC	-	-	C	ko:K03888	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002	Menaquinol-cytochrome c reductase cytochrome b c subunit
PHCCMDOK_04387	8.39e-159	qcrB	-	-	C	ko:K03887	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002	COG1290 Cytochrome b subunit of the bc complex
PHCCMDOK_04388	4.26e-118	qcrA	-	-	C	ko:K03886	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Menaquinol-cytochrome c reductase
PHCCMDOK_04389	8.72e-105	ypiF	-	-	S	-	-	-	Protein of unknown function (DUF2487)
PHCCMDOK_04390	3.4e-126	ypiB	-	-	S	-	-	-	Belongs to the UPF0302 family
PHCCMDOK_04391	2.96e-289	ypiA	-	-	S	-	-	-	COG0457 FOG TPR repeat
PHCCMDOK_04392	4.72e-301	aroA	2.5.1.19	-	E	ko:K00800	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PHCCMDOK_04393	8.67e-255	tyrA	1.3.1.12	-	E	ko:K04517	ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	prephenate dehydrogenase
PHCCMDOK_04394	8.12e-262	hisC	2.6.1.9	-	E	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PHCCMDOK_04395	1.33e-187	trpA	4.2.1.20	-	E	ko:K01695	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PHCCMDOK_04396	2.34e-283	trpB	4.2.1.20, 5.3.1.24	-	E	ko:K01696,ko:K01817	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PHCCMDOK_04397	1.02e-147	trpF	5.3.1.24	-	E	ko:K01817	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	phosphoribosylanthranilate isomerase activity
PHCCMDOK_04398	1.41e-166	trpC	4.1.1.48, 5.3.1.24	-	E	ko:K01609,ko:K13498	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TrpC family
PHCCMDOK_04399	2.3e-231	trpD	2.4.2.18, 4.1.3.27	-	E	ko:K00766,ko:K13497	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PHCCMDOK_04400	0.0	trpE	4.1.3.27	-	EH	ko:K01657	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PHCCMDOK_04401	4.6e-77	aroH	5.4.99.5	-	E	ko:K06208	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis
PHCCMDOK_04402	4.94e-246	aroB	4.2.3.4	-	E	ko:K01735	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PHCCMDOK_04403	2.07e-280	aroC	4.2.3.5	-	E	ko:K01736	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PHCCMDOK_04404	4.6e-179	cheR	2.1.1.80	-	NT	ko:K00575	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko01000,ko02035	COG1352 Methylase of chemotaxis methyl-accepting proteins
PHCCMDOK_04405	6.26e-101	ndk	2.7.4.6	-	F	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	ko00000,ko00001,ko00002,ko01000,ko04131	Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
PHCCMDOK_04406	6.62e-231	hepT	2.5.1.30, 2.5.1.83	-	H	ko:K00805,ko:K21275	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PHCCMDOK_04407	2.24e-203	mqnA	4.2.1.151	-	S	ko:K11782	ko00130,ko01110,map00130,map01110	ko00000,ko00001,ko01000	Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
PHCCMDOK_04408	4.66e-201	ubiA	2.5.1.39	-	H	ko:K03179	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	UbiA prenyltransferase family
PHCCMDOK_04409	1.18e-164	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PHCCMDOK_04410	5.14e-73	hepS	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	heptaprenyl diphosphate synthase
PHCCMDOK_04411	1.85e-48	mtrB	-	-	K	ko:K06285	-	ko00000,ko03000	Required for transcription attenuation control in the Trp operon. This trans-acting factor seems to recognize a 10 bases nucleotide sequence in the Trp leader transcript causing transcription termination. Binds the leader RNA only in presence of L-tryptophan
PHCCMDOK_04412	1.12e-128	folE	3.5.4.16	-	H	ko:K01495	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	GTP cyclohydrolase
PHCCMDOK_04413	0.0	spoIVA	-	-	S	ko:K06398	-	ko00000	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
PHCCMDOK_04414	5.33e-171	yphF	-	-	-	-	-	-	-
PHCCMDOK_04415	8.81e-10	yphE	-	-	S	-	-	-	Protein of unknown function (DUF2768)
PHCCMDOK_04416	2.5e-52	-	-	-	S	-	-	-	Stage VI sporulation protein F
PHCCMDOK_04417	3.58e-237	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
PHCCMDOK_04418	2.91e-132	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PHCCMDOK_04419	1.29e-314	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
PHCCMDOK_04421	1.68e-257	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
PHCCMDOK_04422	7.57e-135	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	1-acyl-sn-glycerol-3-phosphate acyltransferase
PHCCMDOK_04423	4.01e-168	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
PHCCMDOK_04424	1.76e-314	ypeB	-	-	H	ko:K06313	-	ko00000	sporulation protein
PHCCMDOK_04425	1.07e-209	sleB	3.5.1.28	-	M	ko:K01449	-	ko00000,ko01000	Spore cortex-lytic enzyme
PHCCMDOK_04426	0.0	metH	2.1.1.13	-	E	ko:K00548	ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Methionine synthase
PHCCMDOK_04427	0.0	yitJ	1.5.1.20, 2.1.1.10	-	E	ko:K00297,ko:K00547	ko00270,ko00670,ko00720,ko01100,ko01110,ko01120,ko01200,ko01523,map00270,map00670,map00720,map01100,map01110,map01120,map01200,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine
PHCCMDOK_04428	1.3e-262	metB	2.5.1.48	-	E	ko:K01739	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
PHCCMDOK_04429	4.79e-35	-	-	-	-	-	-	-	-
PHCCMDOK_04430	3.4e-145	prsW	-	-	S	-	-	-	Involved in the degradation of specific anti-sigma factors
PHCCMDOK_04431	1.32e-224	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D
PHCCMDOK_04432	2.91e-229	ypdA	1.8.1.9	-	O	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	COG0492 Thioredoxin reductase
PHCCMDOK_04433	3.06e-303	gudB	1.4.1.2, 1.4.1.4	-	E	ko:K00260,ko:K00262	ko00220,ko00250,ko00430,ko00910,ko01100,map00220,map00250,map00430,map00910,map01100	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
PHCCMDOK_04434	2.66e-226	-	-	-	-	-	-	-	-
PHCCMDOK_04435	0.0	-	-	-	T	-	-	-	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PHCCMDOK_04436	2.22e-161	-	-	-	T	-	-	-	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PHCCMDOK_04437	1.36e-139	mecB	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC
PHCCMDOK_04438	8.85e-212	ycgE	-	-	K	ko:K22491	-	ko00000,ko03000	MerR family transcriptional regulator
PHCCMDOK_04439	1.89e-183	ypbG	-	-	S	ko:K07098	-	ko00000	Calcineurin-like phosphoesterase superfamily domain
PHCCMDOK_04440	2.33e-281	-	-	-	E	ko:K01436	-	ko00000,ko01000,ko01002	COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
PHCCMDOK_04442	5.09e-225	mprF	-	-	I	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PHCCMDOK_04443	3.38e-251	-	-	GT4	M	ko:K13678	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
PHCCMDOK_04444	2.18e-287	-	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyl Transferase
PHCCMDOK_04445	1.44e-48	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PHCCMDOK_04446	7.55e-69	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PHCCMDOK_04449	1.12e-129	ypbD	-	-	S	ko:K07052	-	ko00000	metal-dependent membrane protease
PHCCMDOK_04450	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	DNA helicase
PHCCMDOK_04451	5.87e-222	ypbB	5.1.3.1	-	S	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	protein conserved in bacteria
PHCCMDOK_04452	2.28e-57	fer	-	-	C	ko:K05337	-	ko00000	Ferredoxin
PHCCMDOK_04453	0.0	serA	1.1.1.399, 1.1.1.95	-	E	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PHCCMDOK_04454	7.52e-315	nox	1.11.1.1	-	P	ko:K05910	-	ko00000,ko01000	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PHCCMDOK_04455	5e-175	ykoY	-	-	P	-	-	-	COG0861 Membrane protein TerC, possibly involved in tellurium resistance
PHCCMDOK_04457	5.18e-122	yvqK	2.5.1.17	-	S	ko:K00798	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Adenosyltransferase
PHCCMDOK_04458	5.59e-175	yvrA	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components
PHCCMDOK_04459	2.15e-239	btuC	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PHCCMDOK_04460	0.0	resE	2.7.13.3	-	T	ko:K07651	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PHCCMDOK_04461	2.69e-167	resD	-	-	T	ko:K07775	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PHCCMDOK_04462	1.13e-272	resC	-	-	O	-	-	-	'COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component'
PHCCMDOK_04463	0.0	resB	-	-	O	ko:K07399	-	ko00000	COG1333 ResB protein required for cytochrome c biosynthesis
PHCCMDOK_04464	2.06e-125	resA	-	-	CO	-	-	-	Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c
PHCCMDOK_04465	3.81e-169	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
PHCCMDOK_04466	5.76e-102	spmB	-	-	S	ko:K06374	-	ko00000	Spore maturation protein
PHCCMDOK_04467	2.51e-130	spmA	-	-	S	ko:K06373	-	ko00000	Spore maturation protein
PHCCMDOK_04468	5.57e-268	dacB	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PHCCMDOK_04469	1.46e-73	spoVAE	-	-	S	ko:K06407	-	ko00000	stage V sporulation protein
PHCCMDOK_04470	6.02e-246	spoVAD	-	-	I	ko:K06406	-	ko00000	Stage V sporulation protein AD
PHCCMDOK_04471	2.13e-101	spoVAC	-	-	S	ko:K06405	-	ko00000	stage V sporulation protein AC
PHCCMDOK_04472	5.4e-59	-	-	-	S	-	-	-	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PHCCMDOK_04473	1.44e-157	-	-	-	S	-	-	-	membrane
PHCCMDOK_04474	1.89e-59	-	-	-	S	-	-	-	ATP synthase, subunit b
PHCCMDOK_04475	0.0	ubiB	-	-	S	ko:K03688	-	ko00000	ABC1 family
PHCCMDOK_04476	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PHCCMDOK_04477	5.16e-215	sodF	1.15.1.1	-	P	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	ko00000,ko00001,ko01000	Superoxide dismutase
PHCCMDOK_04478	0.0	acoD	-	-	C	ko:K00138	ko00010,ko00620,ko01100,ko01110,ko01120,map00010,map00620,map01100,map01110,map01120	ko00000,ko00001,ko01000	Belongs to the aldehyde dehydrogenase family
PHCCMDOK_04479	1.67e-135	-	-	-	K	-	-	-	Uncharacterized protein conserved in bacteria (DUF2087)
PHCCMDOK_04480	1.78e-127	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PHCCMDOK_04481	9.2e-161	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PHCCMDOK_04482	9.13e-107	ypuF	-	-	S	ko:K09763	-	ko00000	Domain of unknown function (DUF309)
PHCCMDOK_04483	4.15e-106	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PHCCMDOK_04484	2.54e-286	ribBA	3.5.4.25, 4.1.99.12	-	H	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PHCCMDOK_04485	1.18e-140	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin synthase
PHCCMDOK_04486	7.96e-247	-	-	-	I	-	-	-	3-hydroxyisobutyryl-CoA hydrolase
PHCCMDOK_04487	0.0	iolA	1.2.1.18, 1.2.1.27	-	C	ko:K00140	ko00280,ko00410,ko00562,ko00640,ko01100,ko01200,map00280,map00410,map00562,map00640,map01100,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PHCCMDOK_04488	7.41e-201	hgd	1.1.1.31, 1.1.1.60	-	I	ko:K00020,ko:K00042	ko00280,ko00630,ko01100,map00280,map00630,map01100	ko00000,ko00001,ko01000	3-hydroxyisobutyrate dehydrogenase
PHCCMDOK_04489	6.14e-205	prpB	4.1.3.30, 5.4.2.9	-	G	ko:K01841,ko:K03417	ko00440,ko00640,ko01100,ko01120,ko01130,map00440,map00640,map01100,map01120,map01130	ko00000,ko00001,ko01000	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
PHCCMDOK_04490	0.0	prpD	4.2.1.79	-	S	ko:K01720	ko00640,map00640	ko00000,ko00001,ko01000	2-methylcitrate dehydratase
PHCCMDOK_04491	5.99e-266	mmgD	2.3.3.1	-	C	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Belongs to the citrate synthase family
PHCCMDOK_04492	7.21e-261	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PHCCMDOK_04494	6.39e-201	ccpC	-	-	K	-	-	-	Transcriptional regulator
PHCCMDOK_04495	3.19e-82	ytaB	-	-	T	ko:K05770	ko04080,ko04214,ko04979,ko05166,map04080,map04214,map04979,map05166	ko00000,ko00001,ko02000	membrane
PHCCMDOK_04496	4.61e-106	ppiB	5.2.1.8	-	O	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PHCCMDOK_04497	2.81e-316	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PHCCMDOK_04498	0.0	spoVAF	-	-	EG	ko:K06408	-	ko00000	Stage V sporulation protein AF
PHCCMDOK_04499	2.18e-138	spoVAEA	-	-	S	ko:K06407	-	ko00000	Stage V sporulation protein AE
PHCCMDOK_04500	5.03e-75	-	-	-	S	ko:K06407	-	ko00000	Pfam:SpoVA
PHCCMDOK_04501	5.67e-233	spoVAD	-	-	I	ko:K06406	-	ko00000	Stage V sporulation protein AD
PHCCMDOK_04502	7.14e-105	-	-	-	S	ko:K06405	-	ko00000	Pfam:SpoVA
PHCCMDOK_04503	9.34e-176	sigF	-	-	K	ko:K03091	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PHCCMDOK_04504	6.26e-96	spoIIAB	2.7.11.1	-	F	ko:K06379	-	ko00000,ko01000	Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti-anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition
PHCCMDOK_04505	7.27e-73	spoIIAA	-	-	T	ko:K06378	-	ko00000	Belongs to the anti-sigma-factor antagonist family
PHCCMDOK_04506	9.97e-268	dacF	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family