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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
CGAFBNEO_00001	6.73e-78	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CGAFBNEO_00002	2.16e-79	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CGAFBNEO_00003	5.96e-283	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
CGAFBNEO_00004	3.76e-316	chbC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CGAFBNEO_00006	1.62e-278	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
CGAFBNEO_00007	4.92e-186	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
CGAFBNEO_00008	2.38e-44	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
CGAFBNEO_00009	3.02e-225	-	-	-	S	-	-	-	PFAM Archaeal ATPase
CGAFBNEO_00010	2.67e-251	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
CGAFBNEO_00011	4.95e-164	citG	2.4.2.52	-	H	ko:K05966	ko02020,map02020	ko00000,ko00001,ko01000	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
CGAFBNEO_00012	1.31e-05	-	-	-	S	-	-	-	PFAM Archaeal ATPase
CGAFBNEO_00013	1.75e-164	-	-	-	M	-	-	-	Rib/alpha-like repeat
CGAFBNEO_00014	1.43e-309	lctO	1.13.12.4	-	C	ko:K00467,ko:K10530	ko00620,map00620	ko00000,ko00001,ko01000	L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
CGAFBNEO_00015	7.68e-63	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
CGAFBNEO_00016	5.01e-150	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
CGAFBNEO_00017	6.51e-69	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
CGAFBNEO_00018	7.73e-199	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
CGAFBNEO_00019	9.46e-159	-	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
CGAFBNEO_00020	8.81e-40	-	-	-	M	-	-	-	Mycoplasma protein of unknown function, DUF285
CGAFBNEO_00021	9.86e-146	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
CGAFBNEO_00022	3.39e-88	-	-	-	S	ko:K06915	-	ko00000	cog cog0433
CGAFBNEO_00023	2.75e-143	-	-	-	G	-	-	-	phosphoglycerate mutase
CGAFBNEO_00024	2.93e-119	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CGAFBNEO_00025	6.08e-233	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
CGAFBNEO_00026	2.12e-132	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CGAFBNEO_00027	0.0	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CGAFBNEO_00028	0.0	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
CGAFBNEO_00029	3.46e-32	-	-	-	S	-	-	-	Alpha beta hydrolase
CGAFBNEO_00030	1.47e-303	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
CGAFBNEO_00031	3.55e-28	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative DNA-binding domain
CGAFBNEO_00032	3.34e-303	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
CGAFBNEO_00033	1.02e-115	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CGAFBNEO_00034	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
CGAFBNEO_00035	1.03e-262	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
CGAFBNEO_00036	3.25e-315	-	-	-	M	-	-	-	Glycosyl transferase
CGAFBNEO_00038	9.39e-195	-	-	-	-	-	-	-	-
CGAFBNEO_00039	5.76e-287	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CGAFBNEO_00040	2.56e-291	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
CGAFBNEO_00041	3.04e-297	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CGAFBNEO_00042	1.59e-136	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
CGAFBNEO_00043	2.58e-48	potE	-	-	E	-	-	-	Amino Acid
CGAFBNEO_00044	1.27e-220	potE	-	-	E	-	-	-	Amino Acid
CGAFBNEO_00045	6.25e-246	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
CGAFBNEO_00046	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
CGAFBNEO_00047	1.39e-312	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
CGAFBNEO_00048	8.62e-105	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
CGAFBNEO_00049	1.4e-281	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
CGAFBNEO_00050	3.01e-224	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CGAFBNEO_00051	6.89e-185	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
CGAFBNEO_00052	5.45e-278	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
CGAFBNEO_00053	8.64e-253	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CGAFBNEO_00054	8.02e-181	pbpX1	-	-	V	-	-	-	Beta-lactamase
CGAFBNEO_00055	0.0	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
CGAFBNEO_00056	8.47e-43	-	-	-	C	-	-	-	FMN_bind
CGAFBNEO_00057	3.85e-109	-	-	-	-	-	-	-	-
CGAFBNEO_00058	7.39e-225	iunH	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	inosine-uridine preferring nucleoside hydrolase
CGAFBNEO_00059	2.49e-117	alkD	-	-	L	-	-	-	DNA alkylation repair enzyme
CGAFBNEO_00060	0.0	pbg4	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CGAFBNEO_00061	3.28e-166	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA domain
CGAFBNEO_00062	1.32e-74	pts20B	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
CGAFBNEO_00063	4.56e-78	celC	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose Cellobiose specific IIA subunit
CGAFBNEO_00064	5.16e-110	-	-	-	-	-	-	-	-
CGAFBNEO_00065	0.0	celD	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CGAFBNEO_00066	4.04e-94	-	-	-	S	-	-	-	Domain of unknown function (DUF3284)
CGAFBNEO_00067	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CGAFBNEO_00068	6.69e-153	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA
CGAFBNEO_00069	1.8e-284	pts23C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CGAFBNEO_00070	0.0	pbg6	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CGAFBNEO_00071	1.22e-174	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
CGAFBNEO_00072	1.17e-110	yfhC	-	-	C	-	-	-	nitroreductase
CGAFBNEO_00073	2.32e-127	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
CGAFBNEO_00074	3.52e-311	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
CGAFBNEO_00075	1.14e-192	-	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
CGAFBNEO_00076	1.31e-128	-	-	-	I	-	-	-	PAP2 superfamily
CGAFBNEO_00077	8.95e-148	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
CGAFBNEO_00079	1.77e-220	-	-	-	S	-	-	-	Conserved hypothetical protein 698
CGAFBNEO_00080	1.03e-34	-	-	-	S	-	-	-	Pyridoxamine 5'-phosphate oxidase
CGAFBNEO_00081	6.34e-40	-	-	-	S	-	-	-	Pyridoxamine 5'-phosphate oxidase
CGAFBNEO_00082	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	E1-E2 ATPase
CGAFBNEO_00083	4.22e-41	-	-	-	C	-	-	-	Heavy-metal-associated domain
CGAFBNEO_00084	1.45e-102	dpsB	-	-	P	-	-	-	Belongs to the Dps family
CGAFBNEO_00085	2.6e-110	fnr	-	-	K	ko:K21562	-	ko00000,ko03000	Transcriptional regulator, Crp Fnr family
CGAFBNEO_00086	4.35e-163	yobV3	-	-	K	-	-	-	WYL domain
CGAFBNEO_00087	5.61e-72	-	-	-	S	-	-	-	pyridoxamine 5-phosphate
CGAFBNEO_00088	5.68e-110	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
CGAFBNEO_00089	1.15e-121	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CGAFBNEO_00090	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
CGAFBNEO_00091	7e-131	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
CGAFBNEO_00092	2.33e-230	pepA	-	-	E	-	-	-	M42 glutamyl aminopeptidase
CGAFBNEO_00093	0.0	ykpA	-	-	S	-	-	-	ABC transporter, ATP-binding protein
CGAFBNEO_00094	6.07e-223	ydhF	-	-	S	-	-	-	Aldo keto reductase
CGAFBNEO_00095	1.28e-147	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
CGAFBNEO_00096	1.01e-22	-	-	-	L	-	-	-	Transposase
CGAFBNEO_00097	7.51e-16	-	-	-	L	-	-	-	Transposase
CGAFBNEO_00098	1.21e-72	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CGAFBNEO_00100	4.4e-86	-	-	-	K	-	-	-	LytTr DNA-binding domain
CGAFBNEO_00101	6.11e-66	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
CGAFBNEO_00102	2.37e-164	-	-	-	V	-	-	-	Abi-like protein
CGAFBNEO_00104	2.89e-142	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
CGAFBNEO_00105	1.18e-61	-	-	-	L	-	-	-	DDE superfamily endonuclease
CGAFBNEO_00107	7e-74	mutS1	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
CGAFBNEO_00108	1.22e-277	mutS1	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
CGAFBNEO_00109	1.24e-258	xerS	-	-	L	ko:K03733	-	ko00000,ko03036	Belongs to the 'phage' integrase family
CGAFBNEO_00110	9.07e-51	-	-	-	S	-	-	-	CRISPR-associated protein (Cas_Csn2)
CGAFBNEO_00111	1.39e-53	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
CGAFBNEO_00112	1.44e-164	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
CGAFBNEO_00113	1.92e-212	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
CGAFBNEO_00114	2.97e-163	-	-	-	S	-	-	-	PAS domain
CGAFBNEO_00116	7.16e-69	-	-	-	-	-	-	-	-
CGAFBNEO_00117	1.02e-75	-	-	-	-	-	-	-	-
CGAFBNEO_00118	4.02e-11	-	-	-	-	-	-	-	-
CGAFBNEO_00119	9.18e-202	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
CGAFBNEO_00120	1.58e-154	-	-	-	-	-	-	-	-
CGAFBNEO_00121	1.45e-183	XK27_08125	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
CGAFBNEO_00122	9.79e-181	-	-	-	S	ko:K06889	-	ko00000	Alpha/beta hydrolase family
CGAFBNEO_00123	2.64e-266	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
CGAFBNEO_00124	1.34e-191	oppB	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CGAFBNEO_00125	7.82e-240	oppC	-	-	EP	ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CGAFBNEO_00126	7.1e-252	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CGAFBNEO_00127	6.54e-222	oppF	-	-	P	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CGAFBNEO_00128	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
CGAFBNEO_00129	3.4e-93	hsp	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
CGAFBNEO_00130	5.69e-100	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
CGAFBNEO_00131	1.43e-144	-	-	-	-	-	-	-	-
CGAFBNEO_00133	1.42e-144	-	-	-	E	-	-	-	Belongs to the SOS response-associated peptidase family
CGAFBNEO_00134	4.07e-245	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
CGAFBNEO_00135	4.29e-116	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	MafB19-like deaminase
CGAFBNEO_00136	4.57e-135	-	-	-	S	ko:K06872	-	ko00000	TPM domain
CGAFBNEO_00137	1.71e-173	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
CGAFBNEO_00138	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
CGAFBNEO_00139	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CGAFBNEO_00140	2.72e-189	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
CGAFBNEO_00141	5.17e-129	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
CGAFBNEO_00142	2.56e-193	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
CGAFBNEO_00143	9.99e-53	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
CGAFBNEO_00144	2.91e-190	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
CGAFBNEO_00145	3.12e-308	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CGAFBNEO_00146	5.52e-113	-	-	-	-	-	-	-	-
CGAFBNEO_00147	0.0	-	-	-	S	-	-	-	SLAP domain
CGAFBNEO_00148	5.4e-226	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CGAFBNEO_00149	1.37e-219	-	-	-	GK	-	-	-	ROK family
CGAFBNEO_00150	9.91e-56	-	-	-	-	-	-	-	-
CGAFBNEO_00151	0.0	-	-	-	S	ko:K06885	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
CGAFBNEO_00152	1.75e-89	-	-	-	S	-	-	-	Domain of unknown function (DUF1934)
CGAFBNEO_00153	2.38e-88	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
CGAFBNEO_00154	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
CGAFBNEO_00155	1.89e-312	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CGAFBNEO_00156	7.28e-97	-	-	-	K	-	-	-	acetyltransferase
CGAFBNEO_00157	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CGAFBNEO_00158	2.07e-196	msmR	-	-	K	-	-	-	AraC-like ligand binding domain
CGAFBNEO_00159	8.34e-294	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
CGAFBNEO_00160	9.63e-136	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
CGAFBNEO_00161	1.1e-54	-	-	-	K	-	-	-	Helix-turn-helix
CGAFBNEO_00162	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
CGAFBNEO_00164	1.89e-129	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
CGAFBNEO_00165	4.21e-148	-	-	-	M	-	-	-	Rib/alpha-like repeat
CGAFBNEO_00166	1.8e-225	-	-	-	M	-	-	-	Rib/alpha-like repeat
CGAFBNEO_00167	1.82e-05	-	-	-	-	-	-	-	-
CGAFBNEO_00168	3.9e-96	-	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	UbiA prenyltransferase family
CGAFBNEO_00169	3.74e-125	-	-	-	-	-	-	-	-
CGAFBNEO_00170	3.24e-112	yxaM	-	-	EGP	-	-	-	Major facilitator Superfamily
CGAFBNEO_00171	1.59e-85	yxaM	-	-	EGP	-	-	-	Major facilitator Superfamily
CGAFBNEO_00172	1.5e-150	-	-	-	S	-	-	-	F420-0:Gamma-glutamyl ligase
CGAFBNEO_00173	1.83e-103	-	-	-	S	-	-	-	AAA domain
CGAFBNEO_00174	9.82e-80	-	-	-	F	-	-	-	NUDIX domain
CGAFBNEO_00176	7.01e-32	-	-	-	K	-	-	-	Transcriptional regulator
CGAFBNEO_00177	0.0	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
CGAFBNEO_00178	6.06e-58	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
CGAFBNEO_00179	6.27e-161	-	-	-	L	-	-	-	Transposase
CGAFBNEO_00180	1.5e-90	-	-	-	-	-	-	-	-
CGAFBNEO_00181	4.36e-142	XK27_00160	-	-	S	-	-	-	Domain of unknown function (DUF5052)
CGAFBNEO_00182	3.35e-269	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CGAFBNEO_00183	5.67e-53	-	-	-	S	-	-	-	FRG domain
CGAFBNEO_00185	1.96e-127	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative DNA-binding domain
CGAFBNEO_00186	8.97e-47	-	-	-	-	-	-	-	-
CGAFBNEO_00187	5.94e-200	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
CGAFBNEO_00188	6.13e-110	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CGAFBNEO_00190	8.77e-189	-	-	-	S	ko:K09704	-	ko00000	Metal-independent alpha-mannosidase (GH125)
CGAFBNEO_00192	1.91e-233	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
CGAFBNEO_00193	1.05e-176	-	-	-	F	-	-	-	Phosphorylase superfamily
CGAFBNEO_00194	6.64e-185	-	-	-	F	-	-	-	Phosphorylase superfamily
CGAFBNEO_00195	2.16e-193	-	2.3.1.81	-	V	ko:K00662	-	ko00000,ko01000,ko01504	Aminoglycoside 3-N-acetyltransferase
CGAFBNEO_00196	2.05e-96	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
CGAFBNEO_00197	7.12e-100	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
CGAFBNEO_00198	1.87e-104	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
CGAFBNEO_00199	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
CGAFBNEO_00200	5.88e-278	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
CGAFBNEO_00201	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
CGAFBNEO_00202	3.74e-109	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CGAFBNEO_00203	2.56e-248	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
CGAFBNEO_00204	5.35e-223	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
CGAFBNEO_00205	1.64e-198	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CGAFBNEO_00206	1.67e-79	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CGAFBNEO_00207	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CGAFBNEO_00208	1.61e-64	ylxQ	-	-	J	-	-	-	ribosomal protein
CGAFBNEO_00209	3.75e-63	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
CGAFBNEO_00210	1.19e-259	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
CGAFBNEO_00211	3.4e-108	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
CGAFBNEO_00212	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CGAFBNEO_00213	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
CGAFBNEO_00214	1.74e-251	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
CGAFBNEO_00215	3.93e-181	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
CGAFBNEO_00216	6.38e-178	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CGAFBNEO_00217	1.22e-121	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
CGAFBNEO_00218	5.86e-168	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
CGAFBNEO_00219	1.76e-235	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CGAFBNEO_00220	2.21e-180	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
CGAFBNEO_00221	2.03e-251	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
CGAFBNEO_00222	1.65e-151	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
CGAFBNEO_00223	4.94e-292	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
CGAFBNEO_00224	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
CGAFBNEO_00225	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CGAFBNEO_00226	0.0	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CGAFBNEO_00227	1.3e-40	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
CGAFBNEO_00228	4.16e-51	ynzC	-	-	S	-	-	-	UPF0291 protein
CGAFBNEO_00229	9.86e-146	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CGAFBNEO_00231	8.59e-258	-	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
CGAFBNEO_00232	3.45e-144	-	-	-	L	-	-	-	Resolvase, N-terminal
CGAFBNEO_00233	6.01e-147	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
CGAFBNEO_00234	6.64e-154	ung2	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil-DNA glycosylase
CGAFBNEO_00235	1.66e-268	-	-	-	S	-	-	-	SLAP domain
CGAFBNEO_00236	1.64e-74	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
CGAFBNEO_00237	1.63e-173	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
CGAFBNEO_00238	2.08e-122	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CGAFBNEO_00239	6.78e-60	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
CGAFBNEO_00240	2.32e-290	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CGAFBNEO_00241	5.56e-72	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
CGAFBNEO_00242	0.0	ctrA	-	-	E	ko:K03294	-	ko00000	amino acid
CGAFBNEO_00243	3.09e-289	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CGAFBNEO_00244	1.3e-208	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CGAFBNEO_00246	1.58e-09	-	-	-	S	-	-	-	Phage uncharacterised protein (Phage_XkdX)
CGAFBNEO_00249	1.28e-22	-	-	-	-	-	-	-	-
CGAFBNEO_00250	1.66e-36	-	-	-	-	-	-	-	-
CGAFBNEO_00251	4.55e-152	rbtT	-	-	P	ko:K13021	-	ko00000,ko02000	Major Facilitator Superfamily
CGAFBNEO_00252	3.72e-85	-	-	-	EGP	-	-	-	Major Facilitator
CGAFBNEO_00253	1.66e-44	-	-	-	K	-	-	-	Transcriptional regulator
CGAFBNEO_00255	1.45e-133	-	-	-	-	-	-	-	-
CGAFBNEO_00256	1.59e-172	znuB	-	-	U	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
CGAFBNEO_00257	1.63e-152	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
CGAFBNEO_00258	2.96e-210	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
CGAFBNEO_00259	4.47e-56	-	-	-	K	ko:K21903	-	ko00000,ko03000	helix_turn_helix, Arsenical Resistance Operon Repressor
CGAFBNEO_00260	0.0	fruA	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase System
CGAFBNEO_00261	2.18e-215	pfkB	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family. LacC subfamily
CGAFBNEO_00262	3.14e-175	fruR	-	-	K	ko:K03436	-	ko00000,ko03000	DeoR C terminal sensor domain
CGAFBNEO_00263	6.39e-279	natB	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
CGAFBNEO_00264	3.09e-212	natA	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CGAFBNEO_00265	3.41e-88	-	-	-	-	-	-	-	-
CGAFBNEO_00266	2.52e-32	-	-	-	-	-	-	-	-
CGAFBNEO_00267	6.32e-42	-	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
CGAFBNEO_00268	4.74e-107	-	-	-	-	-	-	-	-
CGAFBNEO_00269	7.87e-30	-	-	-	-	-	-	-	-
CGAFBNEO_00273	5.02e-180	blpT	-	-	-	-	-	-	-
CGAFBNEO_00274	7.86e-138	mesE	-	-	M	ko:K12293,ko:K20345	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko02000	Transport protein ComB
CGAFBNEO_00275	0.0	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
CGAFBNEO_00276	2.08e-164	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
CGAFBNEO_00277	7.34e-178	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
CGAFBNEO_00278	1.89e-23	-	-	-	-	-	-	-	-
CGAFBNEO_00279	0.0	-	-	-	S	ko:K06921	-	ko00000	Archaea bacterial proteins of unknown function
CGAFBNEO_00280	0.0	agl	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
CGAFBNEO_00281	0.0	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
CGAFBNEO_00282	4.48e-34	-	-	-	-	-	-	-	-
CGAFBNEO_00283	1.07e-35	-	-	-	-	-	-	-	-
CGAFBNEO_00284	1.95e-45	-	-	-	-	-	-	-	-
CGAFBNEO_00285	6.94e-70	-	-	-	S	-	-	-	Enterocin A Immunity
CGAFBNEO_00286	7.79e-186	racD	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
CGAFBNEO_00287	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CGAFBNEO_00288	9.28e-271	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
CGAFBNEO_00289	8.32e-157	vanR	-	-	K	-	-	-	response regulator
CGAFBNEO_00290	0.0	ndvA	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
CGAFBNEO_00291	1.68e-179	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter, ATP-binding protein
CGAFBNEO_00292	1.22e-190	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter, ATP-binding protein
CGAFBNEO_00293	3.93e-176	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
CGAFBNEO_00294	6.88e-257	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
CGAFBNEO_00295	4.49e-59	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
CGAFBNEO_00296	4.28e-197	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
CGAFBNEO_00297	4.99e-178	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
CGAFBNEO_00298	5.86e-191	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
CGAFBNEO_00299	3.66e-166	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
CGAFBNEO_00300	2.99e-75	cvpA	-	-	S	-	-	-	Colicin V production protein
CGAFBNEO_00302	5.24e-230	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
CGAFBNEO_00303	9.48e-194	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
CGAFBNEO_00304	2.58e-126	azr	1.5.1.36	-	S	ko:K22394	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
CGAFBNEO_00305	3.41e-125	azo1	1.5.1.36, 1.7.1.6	-	S	ko:K03206,ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
CGAFBNEO_00306	7.51e-145	-	-	-	K	-	-	-	WHG domain
CGAFBNEO_00307	3.66e-43	-	-	-	-	-	-	-	-
CGAFBNEO_00308	4.39e-268	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
CGAFBNEO_00310	5.01e-55	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
CGAFBNEO_00311	4.65e-219	-	-	-	L	-	-	-	Bifunctional protein
CGAFBNEO_00312	2.55e-65	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CGAFBNEO_00313	6.1e-186	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CGAFBNEO_00314	1.09e-226	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CGAFBNEO_00321	7e-19	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
CGAFBNEO_00322	1.21e-16	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CGAFBNEO_00323	1.71e-102	-	-	-	S	-	-	-	DNA binding
CGAFBNEO_00328	2.18e-07	-	-	-	-	-	-	-	-
CGAFBNEO_00329	3.08e-125	-	-	-	S	-	-	-	AntA/AntB antirepressor
CGAFBNEO_00334	3.9e-08	-	-	-	K	-	-	-	DNA-binding protein
CGAFBNEO_00338	5.51e-71	-	-	-	S	-	-	-	Protein of unknown function (DUF1071)
CGAFBNEO_00339	4.5e-41	-	-	-	S	-	-	-	Conserved phage C-terminus (Phg_2220_C)
CGAFBNEO_00340	5.27e-63	-	-	-	L	ko:K02315	-	ko00000,ko03032	IstB-like ATP binding protein
CGAFBNEO_00345	9.81e-51	-	-	-	L	-	-	-	Endodeoxyribonuclease RusA
CGAFBNEO_00346	1.51e-10	-	-	-	-	-	-	-	-
CGAFBNEO_00354	8.27e-46	-	-	-	S	-	-	-	HicB_like antitoxin of bacterial toxin-antitoxin system
CGAFBNEO_00355	7.69e-16	-	-	-	N	-	-	-	HicA toxin of bacterial toxin-antitoxin,
CGAFBNEO_00356	1.27e-47	-	-	-	L	ko:K07474	-	ko00000	Terminase small subunit
CGAFBNEO_00357	9.32e-289	-	-	-	S	-	-	-	Terminase-like family
CGAFBNEO_00358	6.56e-176	-	-	-	S	ko:K09961	-	ko00000	Protein of unknown function (DUF1073)
CGAFBNEO_00359	3.22e-124	-	-	-	S	-	-	-	Phage Mu protein F like protein
CGAFBNEO_00360	1.14e-16	-	-	-	S	-	-	-	Lysin motif
CGAFBNEO_00361	1.12e-136	-	-	-	S	ko:K09960	-	ko00000	Uncharacterized protein conserved in bacteria (DUF2213)
CGAFBNEO_00362	1.02e-75	-	-	-	-	-	-	-	-
CGAFBNEO_00363	1.83e-181	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2184)
CGAFBNEO_00365	2.18e-96	-	-	-	-	-	-	-	-
CGAFBNEO_00366	1.8e-59	-	-	-	-	-	-	-	-
CGAFBNEO_00367	7.95e-69	-	-	-	-	-	-	-	-
CGAFBNEO_00368	3.19e-193	-	-	-	S	-	-	-	Protein of unknown function (DUF3383)
CGAFBNEO_00369	1.33e-73	-	-	-	-	-	-	-	-
CGAFBNEO_00372	0.0	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
CGAFBNEO_00373	1.06e-69	-	-	-	M	-	-	-	LysM domain
CGAFBNEO_00374	6.91e-61	-	-	-	-	-	-	-	-
CGAFBNEO_00375	1.11e-128	-	-	-	-	-	-	-	-
CGAFBNEO_00376	4.6e-63	-	-	-	-	-	-	-	-
CGAFBNEO_00377	1.37e-42	-	-	-	-	-	-	-	-
CGAFBNEO_00378	2.78e-156	-	-	-	S	-	-	-	Baseplate J-like protein
CGAFBNEO_00380	8.78e-42	-	-	-	-	-	-	-	-
CGAFBNEO_00384	1.29e-41	-	-	-	O	-	-	-	OsmC-like protein
CGAFBNEO_00386	1.33e-44	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CGAFBNEO_00387	2.15e-127	-	-	-	L	-	-	-	Helix-turn-helix domain
CGAFBNEO_00388	4.31e-204	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
CGAFBNEO_00389	4.57e-135	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
CGAFBNEO_00390	1.1e-152	-	3.8.1.2	-	S	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
CGAFBNEO_00391	2.08e-58	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
CGAFBNEO_00392	7.7e-126	-	-	-	L	-	-	-	Helix-turn-helix domain
CGAFBNEO_00393	3.21e-175	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
CGAFBNEO_00410	3.97e-91	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CGAFBNEO_00412	1.6e-16	-	-	-	-	-	-	-	-
CGAFBNEO_00414	3.07e-23	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CGAFBNEO_00416	8.09e-138	-	-	-	K	ko:K07741	-	ko00000	BRO family, N-terminal domain
CGAFBNEO_00422	5.11e-69	-	-	-	S	-	-	-	Protein of unknown function (DUF1071)
CGAFBNEO_00423	1.1e-41	-	-	-	S	-	-	-	Conserved phage C-terminus (Phg_2220_C)
CGAFBNEO_00424	5.44e-10	dnaC	-	-	L	ko:K02315	-	ko00000,ko03032	Bacterial dnaA protein
CGAFBNEO_00434	2.44e-32	-	-	-	S	-	-	-	ASCH domain
CGAFBNEO_00435	6.09e-130	-	1.8.4.10, 1.8.4.8	-	EH	ko:K00390	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	sulfate reduction
CGAFBNEO_00437	1.06e-40	-	-	-	-	-	-	-	-
CGAFBNEO_00438	2.14e-141	-	-	-	K	-	-	-	Belongs to the N(4) N(6)-methyltransferase family
CGAFBNEO_00439	1.26e-108	-	-	-	L	-	-	-	transposase activity
CGAFBNEO_00440	4.3e-272	-	-	-	S	ko:K06909	-	ko00000	Terminase RNAseH like domain
CGAFBNEO_00441	4.77e-269	-	-	-	S	-	-	-	Phage portal protein, SPP1 Gp6-like
CGAFBNEO_00442	1.32e-214	-	-	-	S	-	-	-	Phage minor capsid protein 2
CGAFBNEO_00444	1.89e-53	-	-	-	S	-	-	-	Phage minor structural protein GP20
CGAFBNEO_00445	6.19e-195	gpG	-	-	-	-	-	-	-
CGAFBNEO_00446	6.65e-58	-	-	-	-	-	-	-	-
CGAFBNEO_00447	2.27e-52	-	-	-	S	-	-	-	Minor capsid protein
CGAFBNEO_00448	1.92e-41	-	-	-	S	-	-	-	Minor capsid protein
CGAFBNEO_00449	1.67e-67	-	-	-	S	-	-	-	Minor capsid protein from bacteriophage
CGAFBNEO_00450	1.61e-105	-	-	-	N	-	-	-	domain, Protein
CGAFBNEO_00451	2.11e-45	-	-	-	-	-	-	-	-
CGAFBNEO_00452	4.82e-110	-	-	-	S	-	-	-	Bacteriophage Gp15 protein
CGAFBNEO_00453	0.0	-	-	-	D	-	-	-	domain protein
CGAFBNEO_00454	7.46e-139	-	-	-	S	-	-	-	phage tail
CGAFBNEO_00455	0.0	-	-	-	S	-	-	-	Phage minor structural protein
CGAFBNEO_00465	1.8e-49	-	-	-	S	-	-	-	Bacteriophage holin of superfamily 6 (Holin_LLH)
CGAFBNEO_00466	7.31e-130	-	-	-	M	-	-	-	hydrolase, family 25
CGAFBNEO_00469	5.1e-09	-	-	-	-	-	-	-	-
CGAFBNEO_00472	9.13e-157	-	-	-	L	-	-	-	PFAM transposase IS116 IS110 IS902
CGAFBNEO_00473	1.28e-168	-	-	-	L	-	-	-	PFAM transposase IS116 IS110 IS902
CGAFBNEO_00474	1.05e-54	-	-	-	S	-	-	-	Protein of unknown function (DUF2922)
CGAFBNEO_00475	1.21e-40	-	-	-	-	-	-	-	-
CGAFBNEO_00476	1.27e-42	-	-	-	K	-	-	-	Bacterial regulatory helix-turn-helix protein, lysR family
CGAFBNEO_00478	2.99e-114	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CGAFBNEO_00480	3.24e-290	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
CGAFBNEO_00481	0.0	-	-	-	L	-	-	-	Transposase DDE domain
CGAFBNEO_00482	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CGAFBNEO_00483	1.39e-106	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
CGAFBNEO_00484	1.47e-91	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CGAFBNEO_00485	7.71e-157	comC	3.4.23.43	-	NOU	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	Bacterial Peptidase A24 N-terminal domain
CGAFBNEO_00486	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CGAFBNEO_00487	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CGAFBNEO_00488	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
CGAFBNEO_00489	1.92e-106	ytsP	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
CGAFBNEO_00493	2.84e-108	-	-	-	K	-	-	-	FR47-like protein
CGAFBNEO_00494	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
CGAFBNEO_00495	2.77e-248	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CGAFBNEO_00496	3.91e-214	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CGAFBNEO_00497	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CGAFBNEO_00498	3.35e-308	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
CGAFBNEO_00499	1.61e-81	-	-	-	J	ko:K07571	-	ko00000	S1 RNA binding domain
CGAFBNEO_00500	7.52e-78	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
CGAFBNEO_00501	7.32e-46	yabO	-	-	J	-	-	-	S4 domain protein
CGAFBNEO_00502	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CGAFBNEO_00503	1.89e-134	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
CGAFBNEO_00504	2.93e-234	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
CGAFBNEO_00505	1.23e-166	-	-	-	S	-	-	-	(CBS) domain
CGAFBNEO_00506	1.62e-276	alr	5.1.1.1, 5.1.1.5	-	E	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CGAFBNEO_00507	9.39e-80	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
CGAFBNEO_00508	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
CGAFBNEO_00509	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
CGAFBNEO_00510	1.07e-52	rpmE	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
CGAFBNEO_00511	0.0	dexB	3.2.1.70	-	G	ko:K01215	-	ko00000,ko01000	Alpha amylase, catalytic domain protein
CGAFBNEO_00512	1.64e-200	yhaX	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
CGAFBNEO_00513	0.0	-	-	-	E	-	-	-	amino acid
CGAFBNEO_00514	1.33e-295	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CGAFBNEO_00515	1.17e-56	-	-	-	-	-	-	-	-
CGAFBNEO_00516	8.68e-69	-	-	-	-	-	-	-	-
CGAFBNEO_00517	3.44e-238	-	-	-	C	-	-	-	FMN-dependent dehydrogenase
CGAFBNEO_00518	8.88e-178	-	-	-	P	-	-	-	Voltage gated chloride channel
CGAFBNEO_00519	8.85e-121	-	-	-	M	-	-	-	LysM domain protein
CGAFBNEO_00520	7.55e-53	-	-	-	S	-	-	-	Transglycosylase associated protein
CGAFBNEO_00521	2.22e-296	-	-	-	E	ko:K03294	-	ko00000	amino acid
CGAFBNEO_00522	1.02e-19	-	-	-	S	-	-	-	Phage portal protein
CGAFBNEO_00524	6.8e-273	-	-	-	S	-	-	-	Phage Terminase
CGAFBNEO_00527	6.95e-71	-	-	-	L	-	-	-	Phage terminase, small subunit
CGAFBNEO_00528	3.73e-80	-	-	-	L	-	-	-	HNH nucleases
CGAFBNEO_00529	2.55e-09	-	-	-	-	-	-	-	-
CGAFBNEO_00535	1.21e-106	-	-	-	K	ko:K07741	-	ko00000	AntA/AntB antirepressor
CGAFBNEO_00541	9.66e-13	-	-	-	-	-	-	-	-
CGAFBNEO_00544	5.65e-23	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
CGAFBNEO_00552	4.7e-14	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CGAFBNEO_00553	5.53e-95	-	-	-	K	-	-	-	Peptidase S24-like
CGAFBNEO_00554	1.25e-24	-	-	-	S	-	-	-	Hypothetical protein (DUF2513)
CGAFBNEO_00557	8.96e-231	-	-	-	V	-	-	-	Abi-like protein
CGAFBNEO_00558	4.87e-154	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CGAFBNEO_00559	2.48e-12	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CGAFBNEO_00561	2.83e-205	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CGAFBNEO_00562	1.34e-151	-	-	-	-	-	-	-	-
CGAFBNEO_00563	3.06e-202	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
CGAFBNEO_00564	2.95e-283	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
CGAFBNEO_00565	0.0	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase
CGAFBNEO_00566	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
CGAFBNEO_00567	6.83e-133	yrgI	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Histidine phosphatase superfamily (branch 1)
CGAFBNEO_00568	0.0	-	-	-	L	-	-	-	PLD-like domain
CGAFBNEO_00569	2.19e-56	-	-	-	S	-	-	-	SnoaL-like domain
CGAFBNEO_00570	6.13e-70	-	-	-	K	-	-	-	sequence-specific DNA binding
CGAFBNEO_00571	8.71e-31	-	-	-	G	-	-	-	Ribose/Galactose Isomerase
CGAFBNEO_00572	1.81e-35	-	-	-	-	-	-	-	-
CGAFBNEO_00573	5.73e-153	-	-	-	-	-	-	-	-
CGAFBNEO_00574	5.04e-154	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
CGAFBNEO_00575	2.69e-117	-	-	-	-	-	-	-	-
CGAFBNEO_00576	6.93e-140	-	-	-	K	-	-	-	LysR substrate binding domain
CGAFBNEO_00577	4.04e-29	-	-	-	-	-	-	-	-
CGAFBNEO_00578	1.07e-287	-	-	-	S	-	-	-	Sterol carrier protein domain
CGAFBNEO_00579	1.76e-122	citX	2.7.7.61	-	HI	ko:K05964	ko02020,map02020	ko00000,ko00001,ko01000	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
CGAFBNEO_00580	2.01e-135	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
CGAFBNEO_00581	5.39e-84	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CGAFBNEO_00582	2.06e-298	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
CGAFBNEO_00583	6.12e-177	lysR5	-	-	K	-	-	-	LysR substrate binding domain
CGAFBNEO_00584	0.0	-	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
CGAFBNEO_00585	4.97e-64	-	-	-	S	-	-	-	Metal binding domain of Ada
CGAFBNEO_00586	2.71e-44	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
CGAFBNEO_00588	1.42e-74	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
CGAFBNEO_00589	1.96e-252	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
CGAFBNEO_00591	1.49e-252	-	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
CGAFBNEO_00593	1.74e-61	pglI	2.4.1.293	GT2	M	ko:K17250	-	ko00000,ko01000,ko01003	transferase activity, transferring glycosyl groups
CGAFBNEO_00595	5.01e-82	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
CGAFBNEO_00596	3.46e-80	-	-	-	M	-	-	-	Glycosyltransferase, group 2 family protein
CGAFBNEO_00597	2.45e-97	-	-	-	M	-	-	-	Capsular polysaccharide synthesis protein
CGAFBNEO_00598	1.23e-100	-	-	-	M	-	-	-	Glycosyltransferase, group 2 family protein
CGAFBNEO_00599	2.78e-221	cps4F	-	-	M	-	-	-	Glycosyl transferases group 1
CGAFBNEO_00600	1.43e-140	epsE2	-	-	M	-	-	-	Bacterial sugar transferase
CGAFBNEO_00601	3.16e-184	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
CGAFBNEO_00602	2.25e-154	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
CGAFBNEO_00603	8.55e-191	epsB	-	-	M	-	-	-	biosynthesis protein
CGAFBNEO_00604	1.53e-245	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
CGAFBNEO_00608	4.73e-285	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CGAFBNEO_00609	1.26e-223	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
CGAFBNEO_00610	7.03e-53	-	-	-	-	-	-	-	-
CGAFBNEO_00611	1.73e-167	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
CGAFBNEO_00612	1.28e-174	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
CGAFBNEO_00613	1.47e-114	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
CGAFBNEO_00614	4.26e-115	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase homologues.
CGAFBNEO_00615	4.52e-56	-	-	-	-	-	-	-	-
CGAFBNEO_00616	0.0	-	-	-	S	-	-	-	O-antigen ligase like membrane protein
CGAFBNEO_00617	8.77e-144	-	-	-	-	-	-	-	-
CGAFBNEO_00618	5.48e-283	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
CGAFBNEO_00619	4.75e-101	nrdI	-	-	F	ko:K03647	-	ko00000	NrdI Flavodoxin like
CGAFBNEO_00620	1.96e-226	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CGAFBNEO_00621	1.16e-101	-	-	-	-	-	-	-	-
CGAFBNEO_00622	1.58e-143	-	-	-	S	-	-	-	Peptidase_C39 like family
CGAFBNEO_00623	7.36e-109	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
CGAFBNEO_00624	7.35e-174	-	-	-	S	-	-	-	Putative threonine/serine exporter
CGAFBNEO_00625	0.0	-	-	-	S	-	-	-	ABC transporter
CGAFBNEO_00626	2.52e-76	-	-	-	-	-	-	-	-
CGAFBNEO_00627	8.69e-93	rimL	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
CGAFBNEO_00628	5.49e-46	-	-	-	-	-	-	-	-
CGAFBNEO_00629	7.2e-40	-	-	-	-	-	-	-	-
CGAFBNEO_00630	2.33e-143	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
CGAFBNEO_00631	5.74e-256	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
CGAFBNEO_00632	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
CGAFBNEO_00633	7.27e-42	-	-	-	-	-	-	-	-
CGAFBNEO_00634	1.47e-91	doc	-	-	S	ko:K07341	-	ko00000,ko02048	Prophage maintenance system killer protein
CGAFBNEO_00637	4.61e-37	-	-	-	S	-	-	-	Enterocin A Immunity
CGAFBNEO_00639	7.9e-255	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
CGAFBNEO_00640	2.61e-23	-	-	-	-	-	-	-	-
CGAFBNEO_00641	1.05e-119	-	-	-	S	-	-	-	membrane
CGAFBNEO_00642	6.45e-93	-	-	-	K	-	-	-	LytTr DNA-binding domain
CGAFBNEO_00643	6.93e-34	-	-	-	S	-	-	-	Sugar efflux transporter for intercellular exchange
CGAFBNEO_00644	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
CGAFBNEO_00645	4.92e-43	-	-	-	L	-	-	-	Transposase DDE domain
CGAFBNEO_00646	0.0	-	-	-	L	-	-	-	Transposase
CGAFBNEO_00647	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CGAFBNEO_00648	8.69e-96	nrdI	-	-	F	ko:K03647	-	ko00000	NrdI Flavodoxin like
CGAFBNEO_00649	6.04e-249	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CGAFBNEO_00650	0.0	phoR	2.7.13.3	-	T	ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
CGAFBNEO_00651	2.12e-153	phoB	-	-	T	ko:K07658	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C terminal
CGAFBNEO_00652	1.04e-133	-	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
CGAFBNEO_00653	4.13e-178	pstB	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CGAFBNEO_00654	7.4e-196	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
CGAFBNEO_00655	2.4e-202	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
CGAFBNEO_00656	7.81e-186	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
CGAFBNEO_00657	5.68e-34	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
CGAFBNEO_00658	2.85e-101	yveB	-	-	I	-	-	-	PAP2 superfamily
CGAFBNEO_00659	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
CGAFBNEO_00660	2.2e-79	lysM	-	-	M	-	-	-	LysM domain
CGAFBNEO_00661	7.62e-223	-	-	-	-	-	-	-	-
CGAFBNEO_00662	1.87e-288	mdtG2	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
CGAFBNEO_00663	5.95e-114	ymdB	-	-	S	-	-	-	Macro domain protein
CGAFBNEO_00669	1.45e-74	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CGAFBNEO_00670	1.39e-197	malG	-	-	P	ko:K15772	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CGAFBNEO_00671	0.0	malF	-	-	P	ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CGAFBNEO_00672	5.5e-282	-	-	-	G	ko:K15770	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
CGAFBNEO_00673	7e-267	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CGAFBNEO_00674	9.37e-150	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
CGAFBNEO_00675	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
CGAFBNEO_00676	0.0	nplT	3.2.1.133, 3.2.1.135, 3.2.1.54	GH13	G	ko:K01208	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
CGAFBNEO_00677	0.0	malA1	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain
CGAFBNEO_00678	3.01e-128	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
CGAFBNEO_00679	1.41e-287	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
CGAFBNEO_00680	9.16e-241	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
CGAFBNEO_00681	9.01e-90	-	-	-	S	-	-	-	SdpI/YhfL protein family
CGAFBNEO_00682	4.08e-166	-	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
CGAFBNEO_00683	0.0	yclK	-	-	T	-	-	-	Histidine kinase
CGAFBNEO_00684	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
CGAFBNEO_00685	1.25e-135	vanZ	-	-	V	-	-	-	VanZ like family
CGAFBNEO_00686	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
CGAFBNEO_00687	4.42e-272	-	-	-	EGP	-	-	-	Major Facilitator
CGAFBNEO_00688	3.94e-250	ampC	-	-	V	-	-	-	Beta-lactamase
CGAFBNEO_00691	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Domain of unknown function (DUF1727)
CGAFBNEO_00692	9.98e-146	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
CGAFBNEO_00693	6.6e-237	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CGAFBNEO_00694	1.24e-198	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
CGAFBNEO_00695	1.36e-242	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
CGAFBNEO_00696	5.28e-146	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CGAFBNEO_00697	5.87e-166	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
CGAFBNEO_00698	4.83e-37	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CGAFBNEO_00699	2.48e-83	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CGAFBNEO_00700	6.55e-120	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CGAFBNEO_00701	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CGAFBNEO_00702	1.48e-221	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CGAFBNEO_00703	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CGAFBNEO_00704	2.45e-93	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
CGAFBNEO_00705	2.54e-42	-	-	-	S	-	-	-	Protein of unknown function (DUF1146)
CGAFBNEO_00706	4.81e-227	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
CGAFBNEO_00707	1.59e-68	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
CGAFBNEO_00708	5.13e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
CGAFBNEO_00709	1.18e-275	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
CGAFBNEO_00710	9.45e-104	uspA	-	-	T	-	-	-	universal stress protein
CGAFBNEO_00711	1.35e-56	-	-	-	-	-	-	-	-
CGAFBNEO_00712	1.47e-302	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
CGAFBNEO_00713	8.08e-110	-	-	-	S	-	-	-	Protein of unknown function (DUF1694)
CGAFBNEO_00714	3.07e-142	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CGAFBNEO_00715	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
CGAFBNEO_00716	3.52e-272	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
CGAFBNEO_00717	3.48e-288	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CGAFBNEO_00718	2.1e-232	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
CGAFBNEO_00719	6.01e-153	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
CGAFBNEO_00720	1.6e-56	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CGAFBNEO_00721	1.06e-86	-	-	-	S	-	-	-	GtrA-like protein
CGAFBNEO_00722	1.73e-219	yfdH	-	GT2	M	ko:K12999	-	ko00000,ko01000,ko01003,ko01005	Glycosyltransferase, group 2 family protein
CGAFBNEO_00723	3.33e-123	-	-	-	S	-	-	-	Protein of unknown function (DUF3990)
CGAFBNEO_00724	2.09e-59	-	-	-	-	-	-	-	-
CGAFBNEO_00725	9.25e-13	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CGAFBNEO_00726	0.0	yoaB	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
CGAFBNEO_00727	3.02e-166	-	-	-	S	ko:K06926	-	ko00000	AAA domain, putative AbiEii toxin, Type IV TA system
CGAFBNEO_00728	2.91e-67	-	-	-	-	-	-	-	-
CGAFBNEO_00729	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
CGAFBNEO_00730	1.22e-306	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
CGAFBNEO_00731	1.06e-162	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
CGAFBNEO_00732	6.18e-150	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
CGAFBNEO_00733	8.26e-226	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
CGAFBNEO_00734	8.27e-189	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
CGAFBNEO_00735	5.43e-122	mreD	-	-	-	ko:K03571	-	ko00000,ko03036	-
CGAFBNEO_00736	1.4e-09	-	-	-	S	-	-	-	Protein of unknown function (DUF4044)
CGAFBNEO_00737	1.02e-72	-	-	-	S	-	-	-	Protein of unknown function (DUF3397)
CGAFBNEO_00738	6.58e-101	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
CGAFBNEO_00739	1.49e-223	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
CGAFBNEO_00740	6.55e-72	ftsL	-	-	D	-	-	-	Cell division protein FtsL
CGAFBNEO_00741	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
CGAFBNEO_00742	4.43e-224	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CGAFBNEO_00743	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CGAFBNEO_00744	3.88e-264	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CGAFBNEO_00745	3.14e-194	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
CGAFBNEO_00746	8.91e-309	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
CGAFBNEO_00747	2.52e-300	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CGAFBNEO_00748	1.43e-96	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
CGAFBNEO_00749	2.42e-60	yggT	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
CGAFBNEO_00750	4.01e-192	ylmH	-	-	S	-	-	-	S4 domain protein
CGAFBNEO_00751	6.3e-138	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
CGAFBNEO_00752	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CGAFBNEO_00753	9.48e-43	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
CGAFBNEO_00754	1.27e-134	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
CGAFBNEO_00755	6.03e-56	-	-	-	-	-	-	-	-
CGAFBNEO_00756	2.05e-163	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CGAFBNEO_00757	1.62e-276	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
CGAFBNEO_00758	9.98e-75	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
CGAFBNEO_00759	4.47e-278	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
CGAFBNEO_00760	4.7e-163	pgm	-	-	G	-	-	-	Phosphoglycerate mutase family
CGAFBNEO_00761	9.4e-148	-	-	-	S	-	-	-	repeat protein
CGAFBNEO_00762	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
CGAFBNEO_00763	0.0	-	-	-	L	-	-	-	Nuclease-related domain
CGAFBNEO_00764	3.07e-235	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
CGAFBNEO_00765	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CGAFBNEO_00766	5.22e-45	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
CGAFBNEO_00767	1.33e-130	-	-	-	M	-	-	-	LysM domain protein
CGAFBNEO_00768	2.57e-108	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CGAFBNEO_00769	6.31e-99	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CGAFBNEO_00770	1.83e-22	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CGAFBNEO_00771	1.25e-17	-	-	-	-	-	-	-	-
CGAFBNEO_00772	2.77e-220	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase
CGAFBNEO_00773	1.04e-41	-	-	-	-	-	-	-	-
CGAFBNEO_00775	3.65e-90	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
CGAFBNEO_00776	1.08e-145	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
CGAFBNEO_00777	4.51e-77	psiE	-	-	S	ko:K13256	-	ko00000	Phosphate-starvation-inducible E
CGAFBNEO_00779	5.78e-131	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
CGAFBNEO_00780	1.42e-33	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
CGAFBNEO_00781	1.49e-290	amt	-	-	P	ko:K03320	-	ko00000,ko02000	ammonium transporter
CGAFBNEO_00782	7.82e-80	-	-	-	-	-	-	-	-
CGAFBNEO_00783	0.0	-	-	-	L	ko:K03724	-	ko00000,ko01000,ko03400	DEAD DEAH box helicase
CGAFBNEO_00784	2.14e-312	-	-	-	P	-	-	-	P-loop Domain of unknown function (DUF2791)
CGAFBNEO_00785	0.0	-	-	-	S	-	-	-	TerB-C domain
CGAFBNEO_00786	0.0	pckA	4.1.1.49	-	H	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Phosphoenolpyruvate carboxykinase
CGAFBNEO_00787	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
CGAFBNEO_00788	6.94e-202	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CGAFBNEO_00789	9.05e-78	apfA	3.6.1.61	-	F	ko:K18445	ko00230,map00230	ko00000,ko00001,ko01000	Nudix hydrolase
CGAFBNEO_00790	3.36e-42	-	-	-	-	-	-	-	-
CGAFBNEO_00791	2.53e-100	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
CGAFBNEO_00792	5.26e-36	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
CGAFBNEO_00793	2.7e-277	mtlD	1.1.1.17	-	C	ko:K00009	ko00051,map00051	ko00000,ko00001,ko01000	mannitol-1-phosphate 5-dehydrogenase activity
CGAFBNEO_00794	5.75e-103	mtlF	2.7.1.197	-	G	ko:K02798	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CGAFBNEO_00795	0.0	mtlA	2.7.1.197	-	G	ko:K02799,ko:K02800	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
CGAFBNEO_00796	0.0	mtlR	-	-	K	ko:K03483	-	ko00000,ko03000	Mga helix-turn-helix domain
CGAFBNEO_00797	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
CGAFBNEO_00798	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
CGAFBNEO_00799	4.47e-58	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
CGAFBNEO_00800	4.62e-308	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
CGAFBNEO_00801	7.06e-111	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
CGAFBNEO_00802	3.57e-204	-	-	-	K	-	-	-	Transcriptional regulator
CGAFBNEO_00803	1.31e-81	-	-	-	S	-	-	-	Domain of unknown function (DUF956)
CGAFBNEO_00804	3.51e-222	manN	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	system, mannose fructose sorbose family IID component
CGAFBNEO_00805	9.65e-181	manY	-	-	G	ko:K02746,ko:K02795	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system
CGAFBNEO_00806	4.5e-235	manL	2.7.1.191	-	G	ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
CGAFBNEO_00808	9.54e-88	-	-	-	S	-	-	-	AAA domain
CGAFBNEO_00809	8.93e-33	-	-	-	S	-	-	-	HNH endonuclease
CGAFBNEO_00816	3.24e-94	-	-	-	S	-	-	-	Phage antirepressor protein KilAC domain
CGAFBNEO_00817	3.25e-23	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CGAFBNEO_00818	6.57e-24	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
CGAFBNEO_00820	1.29e-32	-	-	-	S	-	-	-	Hypothetical protein (DUF2513)
CGAFBNEO_00823	1.56e-166	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CGAFBNEO_00824	2.1e-37	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
CGAFBNEO_00825	3.57e-47	-	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
CGAFBNEO_00826	8.69e-186	-	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
CGAFBNEO_00827	1.75e-225	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
CGAFBNEO_00828	0.0	oatA	-	-	I	-	-	-	Acyltransferase
CGAFBNEO_00829	1.88e-309	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CGAFBNEO_00830	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
CGAFBNEO_00831	3.87e-141	yngC	-	-	S	-	-	-	SNARE associated Golgi protein
CGAFBNEO_00832	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
CGAFBNEO_00833	4.85e-232	gyaR	1.1.1.26, 1.1.1.399, 1.1.1.95	-	CH	ko:K00015,ko:K00058	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CGAFBNEO_00834	9.06e-191	yxeH	-	-	S	-	-	-	hydrolase
CGAFBNEO_00835	3.88e-118	-	-	-	S	-	-	-	reductase
CGAFBNEO_00836	1.62e-44	-	-	-	S	-	-	-	reductase
CGAFBNEO_00837	3.82e-276	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CGAFBNEO_00839	9.14e-283	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
CGAFBNEO_00840	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
CGAFBNEO_00841	2.03e-310	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
CGAFBNEO_00842	1.8e-99	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
CGAFBNEO_00843	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CGAFBNEO_00844	6.77e-49	-	-	-	-	-	-	-	-
CGAFBNEO_00845	1.38e-223	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
CGAFBNEO_00846	1.85e-115	ybaK	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CGAFBNEO_00847	7.7e-21	-	-	-	-	-	-	-	-
CGAFBNEO_00848	1.13e-45	-	-	-	-	-	-	-	-
CGAFBNEO_00850	0.0	-	-	-	S	-	-	-	Putative threonine/serine exporter
CGAFBNEO_00851	1.05e-226	citR	-	-	K	-	-	-	Putative sugar-binding domain
CGAFBNEO_00852	2.93e-67	-	-	-	-	-	-	-	-
CGAFBNEO_00853	7.91e-14	-	-	-	-	-	-	-	-
CGAFBNEO_00854	8.1e-87	-	-	-	S	-	-	-	Domain of unknown function DUF1828
CGAFBNEO_00855	4.34e-166	-	-	-	S	-	-	-	Peptidase family M23
CGAFBNEO_00856	5.37e-106	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
CGAFBNEO_00857	2.8e-159	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
CGAFBNEO_00858	8.12e-196	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CGAFBNEO_00859	2.86e-307	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
CGAFBNEO_00860	1.25e-80	lexA	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator, GntR family
CGAFBNEO_00861	5.4e-161	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
CGAFBNEO_00862	1.65e-180	-	-	-	-	-	-	-	-
CGAFBNEO_00863	2.54e-176	-	-	-	-	-	-	-	-
CGAFBNEO_00864	3.85e-193	-	-	-	-	-	-	-	-
CGAFBNEO_00865	3.49e-36	-	-	-	-	-	-	-	-
CGAFBNEO_00866	1.27e-133	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
CGAFBNEO_00867	4.01e-184	-	-	-	-	-	-	-	-
CGAFBNEO_00868	4.4e-215	-	-	-	-	-	-	-	-
CGAFBNEO_00869	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
CGAFBNEO_00870	1.28e-150	-	3.1.3.102, 3.1.3.104, 3.1.3.23	-	G	ko:K07757,ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sucrose-6F-phosphate phosphohydrolase
CGAFBNEO_00871	4.87e-236	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
CGAFBNEO_00872	6.67e-261	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
CGAFBNEO_00873	5.87e-228	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
CGAFBNEO_00874	2.12e-173	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	GHMP kinases N terminal domain
CGAFBNEO_00875	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
CGAFBNEO_00876	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
CGAFBNEO_00877	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
CGAFBNEO_00878	9.62e-116	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
CGAFBNEO_00879	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
CGAFBNEO_00880	6.91e-149	dnaD	-	-	L	ko:K02086	-	ko00000	DnaD domain protein
CGAFBNEO_00881	5.5e-148	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CGAFBNEO_00882	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
CGAFBNEO_00883	8.47e-152	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
CGAFBNEO_00884	1.18e-139	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
CGAFBNEO_00885	3.07e-89	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
CGAFBNEO_00886	5.87e-278	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
CGAFBNEO_00887	6.74e-309	cpdA	-	-	S	-	-	-	Calcineurin-like phosphoesterase
CGAFBNEO_00888	9.67e-104	-	-	-	-	-	-	-	-
CGAFBNEO_00889	7.21e-156	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
CGAFBNEO_00890	1.59e-108	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CGAFBNEO_00891	2.58e-13	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CGAFBNEO_00892	6.9e-141	nanE	5.1.3.9	-	G	ko:K01788	ko00520,map00520	ko00000,ko00001,ko01000	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
CGAFBNEO_00893	4.42e-45	cah	3.1.1.41	-	Q	ko:K01060	ko00311,ko01130,map00311,map01130	ko00000,ko00001,ko01000	Acetyl xylan esterase (AXE1)
CGAFBNEO_00894	1.4e-74	cah	3.1.1.41	-	Q	ko:K01060	ko00311,ko01130,map00311,map01130	ko00000,ko00001,ko01000	Acetyl xylan esterase (AXE1)
CGAFBNEO_00895	6.48e-279	-	-	-	E	ko:K03307	-	ko00000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CGAFBNEO_00896	1.48e-166	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
CGAFBNEO_00897	3.74e-70	-	-	-	G	-	-	-	Xylose isomerase domain protein TIM barrel
CGAFBNEO_00898	1.03e-112	nanK	-	-	GK	-	-	-	ROK family
CGAFBNEO_00899	2.65e-154	nanA	4.1.3.3	-	EM	ko:K01639	ko00520,map00520	ko00000,ko00001,ko01000	Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
CGAFBNEO_00900	1.57e-84	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
CGAFBNEO_00901	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CGAFBNEO_00902	2.86e-13	-	-	-	K	ko:K15773	-	ko00000,ko02048,ko03000	peptidyl-tyrosine sulfation
CGAFBNEO_00903	1.28e-09	-	-	-	S	-	-	-	PFAM HicB family
CGAFBNEO_00904	1.44e-161	-	-	-	S	-	-	-	interspecies interaction between organisms
CGAFBNEO_00905	6.78e-47	-	-	-	-	-	-	-	-
CGAFBNEO_00909	2.09e-205	-	-	-	-	-	-	-	-
CGAFBNEO_00910	2.37e-219	-	-	-	-	-	-	-	-
CGAFBNEO_00911	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
CGAFBNEO_00912	2.05e-286	ynbB	-	-	P	-	-	-	aluminum resistance
CGAFBNEO_00913	3.84e-216	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CGAFBNEO_00914	4.95e-89	yqhL	-	-	P	-	-	-	Rhodanese-like protein
CGAFBNEO_00915	1e-47	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
CGAFBNEO_00916	3.25e-154	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Rhomboid family
CGAFBNEO_00917	7.92e-126	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CGAFBNEO_00918	6.25e-29	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
CGAFBNEO_00919	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
CGAFBNEO_00920	0.0	-	-	-	S	-	-	-	membrane
CGAFBNEO_00921	7.04e-218	-	-	-	G	-	-	-	BadF/BadG/BcrA/BcrD ATPase family
CGAFBNEO_00922	9.43e-52	-	-	-	S	ko:K07473	-	ko00000,ko02048	RelB antitoxin
CGAFBNEO_00923	2.74e-69	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	Bacterial toxin of type II toxin-antitoxin system, YafQ
CGAFBNEO_00924	2.22e-60	hupB2	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
CGAFBNEO_00925	1.49e-178	-	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	abc transporter atp-binding protein
CGAFBNEO_00926	1.55e-201	isdF	-	-	U	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CGAFBNEO_00927	2.07e-203	isdE	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
CGAFBNEO_00928	7.04e-159	-	-	-	M	ko:K14193	ko05150,map05150	ko00000,ko00001	Iron Transport-associated domain
CGAFBNEO_00930	6.09e-121	-	-	-	-	-	-	-	-
CGAFBNEO_00931	5.51e-46	-	-	-	S	-	-	-	Transposase C of IS166 homeodomain
CGAFBNEO_00932	4.01e-84	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
CGAFBNEO_00933	9.48e-31	-	-	-	-	-	-	-	-
CGAFBNEO_00934	8.93e-124	-	-	-	S	ko:K16924	-	ko00000,ko00002,ko02000	UPF0397 protein
CGAFBNEO_00935	0.0	ykoD	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CGAFBNEO_00936	3.51e-187	cbiQ	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt transport
CGAFBNEO_00937	1.46e-31	-	-	-	-	-	-	-	-
CGAFBNEO_00938	7.19e-93	ytwI	-	-	S	-	-	-	Protein of unknown function (DUF441)
CGAFBNEO_00939	0.0	citF	2.8.3.10	-	H	ko:K01643	ko02020,map02020	ko00000,ko00001,ko01000	Citrate (pro-3S)-lyase alpha chain
CGAFBNEO_00940	3.46e-212	citE	4.1.3.34	-	G	ko:K01644	ko02020,map02020	ko00000,ko00001,ko01000	Belongs to the HpcH HpaI aldolase family
CGAFBNEO_00941	1.6e-59	citD	-	-	C	ko:K01646	ko02020,map02020	ko00000,ko00001	Covalent carrier of the coenzyme of citrate lyase
CGAFBNEO_00942	5.17e-249	citC	6.2.1.22	-	H	ko:K01910	ko02020,map02020	ko00000,ko00001,ko01000	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
CGAFBNEO_00943	4.89e-196	-	-	-	I	-	-	-	Alpha/beta hydrolase family
CGAFBNEO_00944	0.0	citP	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
CGAFBNEO_00945	2.14e-170	-	-	-	H	-	-	-	Aldolase/RraA
CGAFBNEO_00946	0.0	pepC4	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
CGAFBNEO_00947	1.66e-217	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
CGAFBNEO_00948	0.0	frdA	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
CGAFBNEO_00949	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
CGAFBNEO_00950	2.34e-122	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CGAFBNEO_00951	5.74e-243	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CGAFBNEO_00952	4.37e-205	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
CGAFBNEO_00953	2.57e-223	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
CGAFBNEO_00954	0.0	aha1	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
CGAFBNEO_00955	7.89e-119	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CGAFBNEO_00956	3.53e-228	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CGAFBNEO_00957	0.0	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
CGAFBNEO_00958	8.44e-306	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
CGAFBNEO_00959	0.0	-	-	-	P	ko:K06148	-	ko00000,ko02000	ABC transporter
CGAFBNEO_00960	6.04e-49	-	-	-	-	-	-	-	-
CGAFBNEO_00962	1.46e-161	-	-	-	S	-	-	-	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
CGAFBNEO_00963	7.94e-114	-	-	-	K	-	-	-	GNAT family
CGAFBNEO_00964	3.7e-258	XK27_00915	-	-	C	-	-	-	Luciferase-like monooxygenase
CGAFBNEO_00965	9.14e-317	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CGAFBNEO_00966	8.11e-245	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
CGAFBNEO_00967	1.13e-48	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain protein YaaA
CGAFBNEO_00968	4.22e-267	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CGAFBNEO_00969	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CGAFBNEO_00970	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CGAFBNEO_00971	2.74e-65	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
CGAFBNEO_00972	4.83e-104	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
CGAFBNEO_00973	1.89e-47	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CGAFBNEO_00974	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
CGAFBNEO_00975	3.87e-97	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
CGAFBNEO_00976	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
CGAFBNEO_00977	5.56e-217	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, phosphonate, periplasmic substrate-binding protein
CGAFBNEO_00978	2.26e-215	degV1	-	-	S	-	-	-	DegV family
CGAFBNEO_00979	6.11e-171	-	-	-	V	-	-	-	ABC transporter transmembrane region
CGAFBNEO_00980	4.76e-213	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
CGAFBNEO_00981	3.81e-18	-	-	-	S	-	-	-	CsbD-like
CGAFBNEO_00982	2.26e-31	-	-	-	S	-	-	-	Transglycosylase associated protein
CGAFBNEO_00983	1.37e-287	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
CGAFBNEO_00984	3.92e-153	-	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
CGAFBNEO_00986	6.48e-167	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CGAFBNEO_00987	4.95e-98	-	-	-	-	-	-	-	-
CGAFBNEO_00988	6.59e-115	-	-	-	-	-	-	-	-
CGAFBNEO_00989	2.67e-180	-	-	-	D	-	-	-	Ftsk spoiiie family protein
CGAFBNEO_00990	1.74e-185	-	-	-	S	-	-	-	Replication initiation factor
CGAFBNEO_00991	1.33e-72	-	-	-	-	-	-	-	-
CGAFBNEO_00992	4.04e-36	-	-	-	-	-	-	-	-
CGAFBNEO_00993	3.5e-280	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CGAFBNEO_00995	9.75e-80	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
CGAFBNEO_00996	8.25e-65	-	-	-	V	ko:K01990,ko:K01992	-	ko00000,ko00002,ko02000	Transport permease protein
CGAFBNEO_00998	6.56e-86	sagB	-	-	C	-	-	-	Nitroreductase family
CGAFBNEO_00999	2.94e-73	-	-	-	M	-	-	-	Rib/alpha-like repeat
CGAFBNEO_01000	5.3e-32	-	-	-	-	-	-	-	-
CGAFBNEO_01001	9.71e-47	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
CGAFBNEO_01002	1.55e-29	-	-	-	-	-	-	-	-
CGAFBNEO_01003	8.12e-144	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CGAFBNEO_01004	4.13e-186	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
CGAFBNEO_01005	5.62e-95	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
CGAFBNEO_01006	2.34e-76	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
CGAFBNEO_01007	5.37e-72	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
CGAFBNEO_01008	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
CGAFBNEO_01009	2.78e-65	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
CGAFBNEO_01010	9.37e-96	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CGAFBNEO_01011	5.32e-57	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
CGAFBNEO_01012	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CGAFBNEO_01013	1.32e-305	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
CGAFBNEO_01014	3.16e-231	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
CGAFBNEO_01015	1.74e-274	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CGAFBNEO_01016	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CGAFBNEO_01017	7.58e-69	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
CGAFBNEO_01018	1.39e-237	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
CGAFBNEO_01019	3.89e-132	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
CGAFBNEO_01020	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CGAFBNEO_01021	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CGAFBNEO_01022	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
CGAFBNEO_01023	1.06e-58	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CGAFBNEO_01024	9.67e-36	-	-	-	-	-	-	-	-
CGAFBNEO_01025	8.33e-51	-	-	-	-	-	-	-	-
CGAFBNEO_01026	2.14e-231	-	-	-	M	-	-	-	CHAP domain
CGAFBNEO_01027	0.0	scrA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CGAFBNEO_01028	0.0	scrB	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
CGAFBNEO_01029	2.14e-234	scrR	-	-	K	ko:K03484	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
CGAFBNEO_01030	7.8e-10	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
CGAFBNEO_01031	3.85e-180	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
CGAFBNEO_01032	0.0	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
CGAFBNEO_01033	5.24e-194	-	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CGAFBNEO_01034	6.82e-66	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
CGAFBNEO_01035	3.94e-64	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
CGAFBNEO_01036	2.14e-257	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
CGAFBNEO_01037	2.11e-133	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CGAFBNEO_01038	7.98e-93	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
CGAFBNEO_01039	3.38e-86	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CGAFBNEO_01040	8.47e-182	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CGAFBNEO_01041	1.08e-238	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CGAFBNEO_01042	4.4e-47	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CGAFBNEO_01043	4.47e-196	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
CGAFBNEO_01044	1.83e-190	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
CGAFBNEO_01045	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
CGAFBNEO_01046	2.19e-100	-	-	-	S	-	-	-	ASCH
CGAFBNEO_01047	5.97e-145	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
CGAFBNEO_01048	2.37e-46	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
CGAFBNEO_01049	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CGAFBNEO_01050	5.15e-219	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CGAFBNEO_01051	7.82e-311	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CGAFBNEO_01052	1.98e-180	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
CGAFBNEO_01053	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
CGAFBNEO_01054	1.03e-209	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
CGAFBNEO_01055	2.61e-154	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
CGAFBNEO_01056	3.84e-160	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
CGAFBNEO_01057	3.12e-41	-	-	-	-	-	-	-	-
CGAFBNEO_01058	8.76e-146	int3	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CGAFBNEO_01061	2.15e-09	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CGAFBNEO_01062	2.69e-25	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CGAFBNEO_01063	1.23e-101	-	-	-	S	-	-	-	Phage antirepressor protein KilAC domain
CGAFBNEO_01064	5.99e-61	-	-	-	-	-	-	-	-
CGAFBNEO_01070	8.83e-88	-	-	-	S	-	-	-	AAA domain
CGAFBNEO_01071	9.91e-150	-	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Ham1 family
CGAFBNEO_01072	3.77e-122	-	-	-	S	-	-	-	SNARE associated Golgi protein
CGAFBNEO_01073	0.0	mycA	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
CGAFBNEO_01074	9.29e-220	rluD2	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
CGAFBNEO_01075	1.91e-195	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CGAFBNEO_01076	1.7e-147	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
CGAFBNEO_01077	1.71e-143	-	-	-	S	-	-	-	CYTH
CGAFBNEO_01078	5.74e-148	yjbH	-	-	Q	-	-	-	Thioredoxin
CGAFBNEO_01079	3.83e-17	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
CGAFBNEO_01080	3.92e-171	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
CGAFBNEO_01081	1.5e-178	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
CGAFBNEO_01082	6.28e-87	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
CGAFBNEO_01083	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CGAFBNEO_01084	1.29e-54	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
CGAFBNEO_01085	0.0	clpE	-	-	O	ko:K03697	-	ko00000,ko03110	Belongs to the ClpA ClpB family
CGAFBNEO_01086	8.42e-60	XK27_09445	-	-	S	-	-	-	Domain of unknown function (DUF1827)
CGAFBNEO_01087	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
CGAFBNEO_01088	1.51e-182	hlyX	-	-	S	ko:K03699	-	ko00000,ko02042	Transporter associated domain
CGAFBNEO_01089	3.85e-98	-	-	-	-	-	-	-	-
CGAFBNEO_01090	1.43e-110	-	-	-	-	-	-	-	-
CGAFBNEO_01091	3.39e-186	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
CGAFBNEO_01092	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CGAFBNEO_01093	1.17e-151	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
CGAFBNEO_01094	1.52e-34	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
CGAFBNEO_01095	2.6e-59	-	-	-	-	-	-	-	-
CGAFBNEO_01096	4.42e-269	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
CGAFBNEO_01097	2.12e-273	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
CGAFBNEO_01098	2.54e-212	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
CGAFBNEO_01099	3.44e-209	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
CGAFBNEO_01100	9.98e-211	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
CGAFBNEO_01101	5.14e-105	ykuP	-	-	C	ko:K03839	-	ko00000	Flavodoxin
CGAFBNEO_01102	7.46e-113	gtcA1	-	-	S	-	-	-	Teichoic acid glycosylation protein
CGAFBNEO_01103	8.53e-43	-	-	-	L	-	-	-	Transposase DDE domain
CGAFBNEO_01104	1.22e-192	pmrA	-	-	EGP	ko:K08161	-	ko00000,ko02000	MFS_1 like family
CGAFBNEO_01105	5.76e-66	-	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
CGAFBNEO_01106	1.09e-148	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CGAFBNEO_01107	3.26e-292	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CGAFBNEO_01108	4.65e-120	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CGAFBNEO_01109	8.87e-226	ydbI	-	-	K	-	-	-	AI-2E family transporter
CGAFBNEO_01110	3.93e-134	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
CGAFBNEO_01111	2.55e-26	-	-	-	-	-	-	-	-
CGAFBNEO_01112	1.59e-315	-	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
CGAFBNEO_01113	8.64e-176	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CGAFBNEO_01114	4.76e-168	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
CGAFBNEO_01115	3.35e-223	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
CGAFBNEO_01116	7.75e-170	ysaA	3.1.3.5, 3.8.1.2	-	S	ko:K01560,ko:K07025,ko:K08723	ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
CGAFBNEO_01117	7.2e-202	-	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
CGAFBNEO_01118	1.65e-205	yvgN	-	-	C	-	-	-	Aldo keto reductase
CGAFBNEO_01119	0.0	fusA1	-	-	J	-	-	-	elongation factor G
CGAFBNEO_01120	3.16e-192	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	haloacid dehalogenase-like hydrolase
CGAFBNEO_01121	6.16e-179	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
CGAFBNEO_01122	9.62e-247	ldhA	1.1.1.28	-	C	ko:K03778,ko:K18347	ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01504	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CGAFBNEO_01123	1.44e-07	-	-	-	S	-	-	-	YSIRK type signal peptide
CGAFBNEO_01125	1.2e-202	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
CGAFBNEO_01126	0.0	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
CGAFBNEO_01127	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
CGAFBNEO_01128	6.72e-261	pbpX	-	-	V	-	-	-	Beta-lactamase
CGAFBNEO_01129	1.05e-289	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
CGAFBNEO_01130	4.19e-92	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
CGAFBNEO_01131	1.01e-255	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
CGAFBNEO_01132	1.99e-87	srlB	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
CGAFBNEO_01133	2.19e-270	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
CGAFBNEO_01134	2.12e-136	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
CGAFBNEO_01135	3.12e-91	-	-	-	S	-	-	-	Protein of unknown function (DUF1149)
CGAFBNEO_01136	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
CGAFBNEO_01137	4.2e-284	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
CGAFBNEO_01138	1.06e-298	ymfH	-	-	S	-	-	-	Peptidase M16
CGAFBNEO_01139	1.39e-171	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
CGAFBNEO_01140	1.63e-154	ymfM	-	-	S	ko:K15539	-	ko00000	Helix-turn-helix domain
CGAFBNEO_01141	3.92e-123	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CGAFBNEO_01142	1.17e-248	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CGAFBNEO_01143	3.03e-293	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
CGAFBNEO_01144	1.94e-268	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	transferase
CGAFBNEO_01145	5.04e-154	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
CGAFBNEO_01146	7.71e-314	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
CGAFBNEO_01147	9.44e-169	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
CGAFBNEO_01148	1.55e-122	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CGAFBNEO_01149	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
CGAFBNEO_01150	2.24e-238	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CGAFBNEO_01151	8.33e-27	-	-	-	-	-	-	-	-
CGAFBNEO_01152	3.54e-230	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
CGAFBNEO_01153	4.04e-203	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CGAFBNEO_01154	1.92e-238	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
CGAFBNEO_01155	3.42e-232	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
CGAFBNEO_01156	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
CGAFBNEO_01157	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
CGAFBNEO_01158	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
CGAFBNEO_01159	1.55e-117	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
CGAFBNEO_01160	2.44e-211	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
CGAFBNEO_01161	2.78e-251	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
CGAFBNEO_01162	8.59e-221	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
CGAFBNEO_01163	1.16e-128	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
CGAFBNEO_01164	0.0	-	-	-	S	-	-	-	SH3-like domain
CGAFBNEO_01165	3.16e-144	ybbL	-	-	S	ko:K02068	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CGAFBNEO_01166	4.76e-168	ybbM	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
CGAFBNEO_01167	5.35e-121	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
CGAFBNEO_01168	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
CGAFBNEO_01169	5.38e-101	-	-	-	K	-	-	-	MerR HTH family regulatory protein
CGAFBNEO_01170	3.23e-149	-	-	-	V	ko:K11050	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CGAFBNEO_01171	6.46e-119	cylB	-	-	V	ko:K11051	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-2 type transporter
CGAFBNEO_01172	3.8e-60	-	-	-	K	-	-	-	LytTr DNA-binding domain
CGAFBNEO_01173	3.87e-43	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
CGAFBNEO_01174	5.21e-181	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
CGAFBNEO_01175	0.0	ycaM	-	-	E	-	-	-	amino acid
CGAFBNEO_01176	0.0	-	-	-	-	-	-	-	-
CGAFBNEO_01178	9.26e-241	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	Putative sugar-binding domain
CGAFBNEO_01179	2.86e-244	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
CGAFBNEO_01180	2.86e-286	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
CGAFBNEO_01181	5.46e-183	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
CGAFBNEO_01182	1.18e-253	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
CGAFBNEO_01183	3.07e-124	-	-	-	-	-	-	-	-
CGAFBNEO_01184	8.06e-200	ycsE	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
CGAFBNEO_01185	1.64e-174	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CGAFBNEO_01186	1.1e-232	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
CGAFBNEO_01187	4.82e-113	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
CGAFBNEO_01188	6.15e-127	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
CGAFBNEO_01189	2.84e-208	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
CGAFBNEO_01190	1.25e-263	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
CGAFBNEO_01191	8.77e-173	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CGAFBNEO_01192	3.69e-170	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CGAFBNEO_01193	3.46e-266	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CGAFBNEO_01194	2.13e-194	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
CGAFBNEO_01195	2.76e-221	ybbR	-	-	S	-	-	-	YbbR-like protein
CGAFBNEO_01196	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CGAFBNEO_01197	8.04e-190	-	-	-	S	-	-	-	hydrolase
CGAFBNEO_01198	3.23e-98	copY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Penicillinase repressor
CGAFBNEO_01199	2.85e-153	-	-	-	-	-	-	-	-
CGAFBNEO_01200	3.07e-112	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CGAFBNEO_01201	2.52e-262	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
CGAFBNEO_01202	8.39e-195	bglG5	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
CGAFBNEO_01203	0.0	pts33BCA	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CGAFBNEO_01204	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CGAFBNEO_01205	5.12e-199	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
CGAFBNEO_01206	6.91e-118	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
CGAFBNEO_01207	3.51e-218	-	-	-	L	-	-	-	COG3385 FOG Transposase and inactivated derivatives
CGAFBNEO_01208	2.94e-166	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
CGAFBNEO_01209	4.55e-221	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
CGAFBNEO_01210	5e-53	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
CGAFBNEO_01211	3.88e-52	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
CGAFBNEO_01212	0.0	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CGAFBNEO_01213	2.48e-129	yjcK	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
CGAFBNEO_01214	1.31e-142	-	-	-	S	-	-	-	SNARE associated Golgi protein
CGAFBNEO_01215	1.07e-195	-	-	-	I	-	-	-	alpha/beta hydrolase fold
CGAFBNEO_01216	2.71e-200	plcR	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
CGAFBNEO_01217	2.73e-107	-	-	-	F	-	-	-	Nucleoside 2-deoxyribosyltransferase
CGAFBNEO_01218	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
CGAFBNEO_01219	9.76e-200	-	-	-	-	-	-	-	-
CGAFBNEO_01220	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
CGAFBNEO_01221	1.53e-127	yobS	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CGAFBNEO_01222	1.89e-205	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
CGAFBNEO_01223	1.4e-207	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
CGAFBNEO_01224	2.12e-310	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
CGAFBNEO_01225	0.0	-	-	-	S	-	-	-	Zn-dependent metallo-hydrolase RNA specificity domain
CGAFBNEO_01226	5.62e-187	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CGAFBNEO_01227	1.64e-202	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	ABC-type sugar transport systems, permease components
CGAFBNEO_01228	5.26e-259	malK	-	-	P	ko:K10112,ko:K17240	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
CGAFBNEO_01229	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CGAFBNEO_01230	7.24e-204	endA	-	-	F	ko:K15051	-	ko00000	DNA RNA non-specific endonuclease
CGAFBNEO_01231	1.29e-230	-	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	EXOIII
CGAFBNEO_01232	8.83e-204	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CGAFBNEO_01233	2.23e-150	yviA	-	-	S	-	-	-	Protein of unknown function (DUF421)
CGAFBNEO_01234	2.94e-74	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
CGAFBNEO_01235	2.45e-95	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
CGAFBNEO_01236	3.67e-89	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
CGAFBNEO_01237	3.16e-160	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
CGAFBNEO_01238	8.43e-206	-	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
CGAFBNEO_01239	2.42e-33	-	-	-	-	-	-	-	-
CGAFBNEO_01240	1.4e-163	gpmA1	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CGAFBNEO_01241	5.69e-235	-	-	-	S	-	-	-	AAA domain
CGAFBNEO_01242	8.69e-66	-	-	-	-	-	-	-	-
CGAFBNEO_01243	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
CGAFBNEO_01244	1.11e-69	-	-	-	-	-	-	-	-
CGAFBNEO_01245	5.22e-131	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
CGAFBNEO_01246	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CGAFBNEO_01247	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CGAFBNEO_01248	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
CGAFBNEO_01249	4.95e-98	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
CGAFBNEO_01250	1.56e-177	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CGAFBNEO_01251	3.81e-123	comX	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	Belongs to the sigma-70 factor family
CGAFBNEO_01252	1.19e-45	-	-	-	-	-	-	-	-
CGAFBNEO_01253	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
CGAFBNEO_01254	1.52e-87	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CGAFBNEO_01255	1.34e-310	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CGAFBNEO_01256	3.73e-33	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
CGAFBNEO_01257	1.23e-130	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
CGAFBNEO_01258	3.82e-90	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CGAFBNEO_01259	4.29e-160	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
CGAFBNEO_01260	5.48e-201	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
CGAFBNEO_01261	2.29e-210	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
CGAFBNEO_01262	3.01e-197	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
CGAFBNEO_01263	5.24e-187	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CGAFBNEO_01264	3.83e-178	pstB1	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CGAFBNEO_01265	2.89e-151	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
CGAFBNEO_01266	5.61e-118	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
CGAFBNEO_01268	3.72e-111	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CGAFBNEO_01269	1.61e-72	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
CGAFBNEO_01270	1.04e-187	-	2.1.1.172	-	J	ko:K00564,ko:K10716	-	ko00000,ko01000,ko02000,ko03009	Ion channel
CGAFBNEO_01271	5.31e-149	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
CGAFBNEO_01272	6.15e-36	-	-	-	-	-	-	-	-
CGAFBNEO_01274	1.24e-75	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
CGAFBNEO_01275	1.48e-134	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CGAFBNEO_01276	1.95e-218	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
CGAFBNEO_01277	1.13e-126	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
CGAFBNEO_01278	3.33e-97	yjcF	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
CGAFBNEO_01279	7.09e-184	aatB	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
CGAFBNEO_01280	4.85e-136	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
CGAFBNEO_01281	3e-139	yecS_2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
CGAFBNEO_01282	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
CGAFBNEO_01283	1.47e-158	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
CGAFBNEO_01284	3.07e-162	gpm2	-	-	G	-	-	-	Phosphoglycerate mutase family
CGAFBNEO_01285	1.87e-308	-	-	-	S	-	-	-	response to antibiotic
CGAFBNEO_01286	1.56e-161	-	-	-	-	-	-	-	-
CGAFBNEO_01287	0.0	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
CGAFBNEO_01288	7.34e-86	-	2.7.1.191	-	G	ko:K02793	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
CGAFBNEO_01289	5.1e-57	-	-	-	-	-	-	-	-
CGAFBNEO_01290	6.6e-14	-	-	-	-	-	-	-	-
CGAFBNEO_01291	4.71e-239	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase, type I
CGAFBNEO_01292	2.89e-176	-	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
CGAFBNEO_01293	0.0	malH	3.2.1.122	GH4	G	ko:K01232	ko00500,map00500	ko00000,ko00001,ko01000	Family 4 glycosyl hydrolase C-terminal domain
CGAFBNEO_01294	8.75e-197	-	-	-	-	-	-	-	-
CGAFBNEO_01295	3.32e-13	-	-	-	-	-	-	-	-
CGAFBNEO_01296	5.45e-121	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
CGAFBNEO_01297	2.77e-135	-	-	-	K	ko:K06977	-	ko00000	acetyltransferase
CGAFBNEO_01299	2.53e-287	lacE	2.7.1.207	-	G	ko:K02761,ko:K02787,ko:K02788	ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CGAFBNEO_01300	1.52e-105	-	-	-	L	-	-	-	MgsA AAA+ ATPase C terminal
CGAFBNEO_01301	1.91e-28	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
CGAFBNEO_01302	4.85e-93	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
CGAFBNEO_01303	1.1e-128	-	-	-	E	ko:K02054	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CGAFBNEO_01304	2.91e-103	-	-	-	S	-	-	-	Phage portal protein
CGAFBNEO_01305	2.67e-95	-	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S14 family
CGAFBNEO_01306	7.4e-57	-	-	-	S	-	-	-	Phage capsid family
CGAFBNEO_01307	1.2e-23	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
CGAFBNEO_01309	1.42e-23	-	-	-	S	-	-	-	Bacteriophage HK97-gp10, putative tail-component
CGAFBNEO_01314	1.81e-174	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
CGAFBNEO_01315	3.54e-36	-	-	-	S	-	-	-	phage tail
CGAFBNEO_01316	2.37e-194	-	-	-	S	-	-	-	Phage minor structural protein
CGAFBNEO_01323	7.99e-87	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CGAFBNEO_01324	3.01e-137	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CGAFBNEO_01325	1.71e-150	-	-	-	S	-	-	-	Peptidase family M23
CGAFBNEO_01326	2.27e-44	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
CGAFBNEO_01327	3.23e-48	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
CGAFBNEO_01328	0.0	pulA	3.2.1.41	CBM48,GH13	G	ko:K01200	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko01000	belongs to the glycosyl hydrolase 13 family
CGAFBNEO_01329	2.51e-52	-	-	-	K	ko:K03484	-	ko00000,ko03000	Periplasmic binding protein domain
CGAFBNEO_01330	7.63e-43	-	-	-	K	ko:K03484	-	ko00000,ko03000	Periplasmic binding protein domain
CGAFBNEO_01331	8.46e-240	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
CGAFBNEO_01332	5.32e-42	-	-	-	-	ko:K18829	-	ko00000,ko02048	-
CGAFBNEO_01333	1.64e-90	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	Toxin-antitoxin system, toxin component, MazF family
CGAFBNEO_01334	9e-132	-	-	-	L	-	-	-	Integrase
CGAFBNEO_01335	1.38e-195	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CGAFBNEO_01336	3.87e-73	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CGAFBNEO_01337	5.1e-139	-	-	-	L	-	-	-	PFAM Integrase catalytic
CGAFBNEO_01338	6.08e-148	eriC	-	-	P	ko:K03281	-	ko00000	chloride
CGAFBNEO_01339	6.55e-76	eriC	-	-	P	ko:K03281	-	ko00000	chloride
CGAFBNEO_01340	6.18e-35	-	-	-	K	-	-	-	FCD
CGAFBNEO_01341	1.43e-19	-	-	-	K	-	-	-	FCD
CGAFBNEO_01342	4.37e-132	-	-	-	GM	-	-	-	NmrA-like family
CGAFBNEO_01343	5.5e-154	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CGAFBNEO_01344	6.35e-164	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
CGAFBNEO_01345	1.52e-212	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
CGAFBNEO_01346	1.01e-122	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CGAFBNEO_01347	9.05e-231	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
CGAFBNEO_01348	2.04e-313	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
CGAFBNEO_01349	3.47e-268	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
CGAFBNEO_01350	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
CGAFBNEO_01351	1.03e-160	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
CGAFBNEO_01353	4.47e-26	-	-	-	-	-	-	-	-
CGAFBNEO_01354	7.81e-100	-	-	-	U	ko:K03205	ko03070,map03070	ko00000,ko00001,ko00002,ko02044	TraM recognition site of TraD and TraG
CGAFBNEO_01358	6.51e-194	-	-	-	S	-	-	-	COG0433 Predicted ATPase
CGAFBNEO_01359	8.52e-25	lysM	-	-	M	-	-	-	LysM domain
CGAFBNEO_01368	1.02e-34	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.87
CGAFBNEO_01369	2.13e-23	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
CGAFBNEO_01370	1.11e-143	-	-	-	S	-	-	-	Fic/DOC family
CGAFBNEO_01371	1.42e-54	-	-	-	E	-	-	-	Pfam:DUF955
CGAFBNEO_01372	1.19e-31	-	-	-	L	ko:K07473	-	ko00000,ko02048	Addiction module antitoxin, RelB DinJ family
CGAFBNEO_01373	1.33e-22	-	-	-	S	-	-	-	PemK-like, MazF-like toxin of type II toxin-antitoxin system
CGAFBNEO_01374	1.41e-284	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CGAFBNEO_01375	0.0	potE	-	-	E	-	-	-	Amino Acid
CGAFBNEO_01376	2.65e-107	-	-	-	S	-	-	-	Fic/DOC family
CGAFBNEO_01377	1.66e-227	-	-	-	-	-	-	-	-
CGAFBNEO_01378	1.65e-125	-	-	-	-	-	-	-	-
CGAFBNEO_01379	5.87e-110	-	-	-	-	-	-	-	-
CGAFBNEO_01380	1.92e-113	yhaH	-	-	S	-	-	-	Protein of unknown function (DUF805)
CGAFBNEO_01381	2.65e-89	-	-	-	O	-	-	-	OsmC-like protein
CGAFBNEO_01382	5.3e-264	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
CGAFBNEO_01383	3e-290	sptS	-	-	T	-	-	-	Histidine kinase
CGAFBNEO_01384	2.14e-85	dltr	-	-	K	-	-	-	response regulator
CGAFBNEO_01385	1.82e-34	dltr	-	-	K	-	-	-	response regulator
CGAFBNEO_01386	6.17e-140	-	-	-	T	-	-	-	Region found in RelA / SpoT proteins
CGAFBNEO_01387	0.0	gtfA	2.4.1.7	GH13	G	ko:K00690	ko00500,map00500	ko00000,ko00001,ko01000	Sucrose glucosyltransferase
CGAFBNEO_01388	0.0	melA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
CGAFBNEO_01389	1.72e-268	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CGAFBNEO_01390	1.02e-195	-	-	-	P	ko:K10119	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CGAFBNEO_01391	8.41e-202	msmF	-	-	P	ko:K10118	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CGAFBNEO_01392	3.19e-302	msmE	-	-	G	ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
CGAFBNEO_01393	3.13e-206	-	-	-	K	ko:K03484	-	ko00000,ko03000	Periplasmic binding protein domain
CGAFBNEO_01394	2.14e-48	-	-	-	-	-	-	-	-
CGAFBNEO_01395	8.29e-254	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
CGAFBNEO_01398	5.31e-211	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
CGAFBNEO_01401	4.21e-286	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CGAFBNEO_01402	0.0	mdr	-	-	EGP	-	-	-	Major Facilitator
CGAFBNEO_01404	1.92e-102	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
CGAFBNEO_01405	3.39e-154	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
CGAFBNEO_01406	1.32e-151	-	-	-	S	-	-	-	Putative esterase
CGAFBNEO_01407	1.81e-270	-	2.7.1.211	-	G	ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CGAFBNEO_01408	7.66e-248	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
CGAFBNEO_01409	3.75e-168	-	-	-	K	-	-	-	rpiR family
CGAFBNEO_01410	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
CGAFBNEO_01411	9.83e-236	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome d ubiquinol oxidase subunit II
CGAFBNEO_01412	0.0	cydC	-	-	CO	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
CGAFBNEO_01413	0.0	cydD	-	-	CO	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CGAFBNEO_01414	1.76e-165	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
CGAFBNEO_01415	1.38e-226	hepT	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
CGAFBNEO_01416	1.03e-206	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
CGAFBNEO_01417	3.01e-294	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
CGAFBNEO_01418	1.41e-51	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
CGAFBNEO_01419	0.0	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
CGAFBNEO_01420	2.09e-129	treR	-	-	K	ko:K03486	-	ko00000,ko03000	UTRA
CGAFBNEO_01421	0.0	treB	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CGAFBNEO_01422	2.76e-86	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
CGAFBNEO_01423	1.13e-241	-	-	-	L	ko:K07478	-	ko00000	AAA C-terminal domain
CGAFBNEO_01424	0.0	yqjE	3.4.11.14, 3.4.11.4	-	E	ko:K01258,ko:K01263	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
CGAFBNEO_01425	5.74e-108	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CGAFBNEO_01426	1.87e-290	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
CGAFBNEO_01427	7.89e-124	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
CGAFBNEO_01428	3.1e-127	pdxK	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
CGAFBNEO_01429	1.59e-259	pbpX1	-	-	V	-	-	-	Beta-lactamase
CGAFBNEO_01430	1.12e-149	maa3	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
CGAFBNEO_01431	1.12e-104	yvbK	-	-	K	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
CGAFBNEO_01432	4.87e-262	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
CGAFBNEO_01433	5.94e-148	-	-	-	I	-	-	-	Acid phosphatase homologues
CGAFBNEO_01434	2.25e-241	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
CGAFBNEO_01435	0.0	uvrA2	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC, A subunit
CGAFBNEO_01436	3.6e-106	-	-	-	C	-	-	-	Flavodoxin
CGAFBNEO_01437	1.06e-30	-	-	-	N	-	-	-	PFAM Uncharacterised protein family UPF0150
CGAFBNEO_01438	9.44e-183	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
CGAFBNEO_01439	6.73e-145	-	-	-	G	-	-	-	Phosphoglycerate mutase family
CGAFBNEO_01440	0.0	pps	2.7.9.2	-	H	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
CGAFBNEO_01441	2.09e-208	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
CGAFBNEO_01442	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
CGAFBNEO_01443	8.43e-73	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
CGAFBNEO_01444	5.03e-297	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
CGAFBNEO_01445	0.0	yhaN	-	-	L	-	-	-	AAA domain
CGAFBNEO_01446	4.53e-239	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
CGAFBNEO_01448	9.67e-33	-	-	-	S	-	-	-	Domain of unknown function DUF1829
CGAFBNEO_01449	0.0	-	-	-	-	-	-	-	-
CGAFBNEO_01450	5.74e-96	eda	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	KDPG and KHG aldolase
CGAFBNEO_01451	3.12e-196	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
CGAFBNEO_01452	1.2e-41	-	-	-	-	-	-	-	-
CGAFBNEO_01453	1.61e-101	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
CGAFBNEO_01454	1.05e-173	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CGAFBNEO_01455	5.7e-282	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
CGAFBNEO_01456	2.16e-163	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
CGAFBNEO_01457	7.81e-169	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
CGAFBNEO_01458	2.53e-117	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CGAFBNEO_01459	1.15e-74	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
CGAFBNEO_01460	1.91e-97	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
CGAFBNEO_01461	6.82e-292	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
CGAFBNEO_01462	4.24e-178	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
CGAFBNEO_01463	6.64e-94	-	-	-	-	-	-	-	-
CGAFBNEO_01464	1.06e-159	dgk2	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
CGAFBNEO_01465	9.85e-154	dak	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
CGAFBNEO_01466	1.15e-173	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
CGAFBNEO_01467	2.33e-98	-	-	-	S	-	-	-	Aldo/keto reductase family
CGAFBNEO_01468	9.99e-89	-	-	-	S	-	-	-	Aldo/keto reductase family
CGAFBNEO_01469	3.63e-221	yufQ	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
CGAFBNEO_01470	8.8e-262	mglC	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
CGAFBNEO_01471	0.0	mglA	3.6.3.17	-	S	ko:K02056,ko:K06400	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
CGAFBNEO_01472	4.57e-232	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
CGAFBNEO_01473	9.76e-256	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
CGAFBNEO_01474	5.9e-130	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
CGAFBNEO_01475	0.0	ppc	4.1.1.31	-	H	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CGAFBNEO_01476	0.0	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CGAFBNEO_01477	5.26e-244	-	-	-	S	-	-	-	DUF218 domain
CGAFBNEO_01478	1.2e-155	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
CGAFBNEO_01479	2.01e-139	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Transcriptional regulator
CGAFBNEO_01480	3.62e-202	-	-	-	EGP	-	-	-	Major facilitator Superfamily
CGAFBNEO_01481	1.05e-67	-	-	-	-	-	-	-	-
CGAFBNEO_01482	1.91e-200	mutR	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CGAFBNEO_01483	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
CGAFBNEO_01484	1.68e-55	yoeB	-	-	S	ko:K19158	-	ko00000,ko01000,ko02048	YoeB-like toxin of bacterial type II toxin-antitoxin system
CGAFBNEO_01485	2.49e-63	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
CGAFBNEO_01486	5.71e-263	napA	-	-	P	-	-	-	Sodium/hydrogen exchanger family
CGAFBNEO_01487	0.0	cadA	-	-	P	-	-	-	P-type ATPase
CGAFBNEO_01488	3.41e-107	ykuL	-	-	S	-	-	-	(CBS) domain
CGAFBNEO_01489	5.11e-265	-	-	-	S	-	-	-	Membrane
CGAFBNEO_01490	1.42e-58	-	-	-	-	-	-	-	-
CGAFBNEO_01491	1.3e-26	-	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
CGAFBNEO_01492	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
CGAFBNEO_01493	2.95e-304	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
CGAFBNEO_01494	4.98e-48	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
CGAFBNEO_01495	6.8e-316	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CGAFBNEO_01496	1.97e-227	pbpX2	-	-	V	-	-	-	Beta-lactamase
CGAFBNEO_01497	2.5e-172	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
CGAFBNEO_01498	1.34e-183	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CGAFBNEO_01499	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
CGAFBNEO_01500	1.96e-49	-	-	-	-	-	-	-	-
CGAFBNEO_01501	0.0	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
CGAFBNEO_01502	2.79e-160	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CGAFBNEO_01503	3.09e-304	pts13C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CGAFBNEO_01504	7.86e-212	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
CGAFBNEO_01505	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	AAA domain (Cdc48 subfamily)
CGAFBNEO_01506	5.08e-149	sipS3	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
CGAFBNEO_01507	2.58e-310	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
CGAFBNEO_01508	5.27e-314	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
CGAFBNEO_01509	6.36e-173	-	-	-	S	-	-	-	PFAM Archaeal ATPase
CGAFBNEO_01510	1.95e-221	-	-	-	V	-	-	-	HNH endonuclease
CGAFBNEO_01512	6.65e-179	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
CGAFBNEO_01513	6.45e-291	-	-	-	E	-	-	-	amino acid
CGAFBNEO_01514	5.12e-242	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
CGAFBNEO_01515	1.84e-263	-	4.2.1.126	-	S	ko:K07106,ko:K09963	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Bacterial protein of unknown function (DUF871)
CGAFBNEO_01518	6.69e-239	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
CGAFBNEO_01519	0.0	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CGAFBNEO_01520	1.23e-313	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CGAFBNEO_01521	3.42e-30	-	-	-	S	-	-	-	HicA toxin of bacterial toxin-antitoxin,
CGAFBNEO_01522	2.2e-308	srrA1	-	-	G	ko:K02027,ko:K17244	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
CGAFBNEO_01523	3.52e-296	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
CGAFBNEO_01524	2.09e-110	-	-	-	-	-	-	-	-
CGAFBNEO_01525	1.04e-211	-	-	-	S	-	-	-	Protein of unknown function (DUF2974)
CGAFBNEO_01526	3.65e-141	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CGAFBNEO_01527	4.29e-122	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CGAFBNEO_01528	3.39e-187	glnH	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CGAFBNEO_01529	2.8e-173	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CGAFBNEO_01530	2.72e-60	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Zeta toxin
CGAFBNEO_01531	5.43e-50	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Zeta toxin
CGAFBNEO_01532	8.41e-314	-	-	-	G	-	-	-	MFS/sugar transport protein
CGAFBNEO_01533	2.44e-129	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
CGAFBNEO_01534	0.0	XK27_09605	-	-	V	ko:K18892	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter transmembrane region
CGAFBNEO_01535	0.0	XK27_09600	-	-	V	ko:K06147,ko:K18891	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
CGAFBNEO_01536	2.53e-106	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
CGAFBNEO_01537	2.05e-188	peb1A	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CGAFBNEO_01538	1.07e-165	-	-	-	F	-	-	-	glutamine amidotransferase
CGAFBNEO_01539	3.41e-312	steT	-	-	E	ko:K03294	-	ko00000	amino acid
CGAFBNEO_01540	2.98e-304	steT	-	-	E	ko:K03294	-	ko00000	amino acid
CGAFBNEO_01541	1.53e-176	-	-	-	-	-	-	-	-
CGAFBNEO_01542	6.24e-210	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
CGAFBNEO_01543	1.11e-98	glnP9	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter, permease protein
CGAFBNEO_01544	1.68e-149	glnP7	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter permease
CGAFBNEO_01545	4.57e-163	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CGAFBNEO_01546	3.72e-202	cjaA	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
CGAFBNEO_01547	2.9e-254	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CGAFBNEO_01548	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
CGAFBNEO_01549	2.55e-94	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
CGAFBNEO_01550	6.74e-214	ldh3	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	lactate/malate dehydrogenase, alpha/beta C-terminal domain
CGAFBNEO_01551	3.55e-182	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
CGAFBNEO_01552	1.8e-34	-	-	-	-	-	-	-	-
CGAFBNEO_01553	0.0	sufI	-	-	Q	-	-	-	Multicopper oxidase
CGAFBNEO_01554	7.18e-193	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
CGAFBNEO_01555	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
CGAFBNEO_01556	6.53e-291	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
CGAFBNEO_01557	2.48e-313	-	-	-	S	ko:K12941	-	ko00000,ko01002	Peptidase dimerisation domain
CGAFBNEO_01558	3.2e-176	-	-	-	S	-	-	-	Protein of unknown function (DUF3100)
CGAFBNEO_01559	2.04e-60	-	-	-	S	-	-	-	An automated process has identified a potential problem with this gene model
CGAFBNEO_01560	4.34e-64	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
CGAFBNEO_01561	1.29e-164	-	-	-	S	-	-	-	SLAP domain
CGAFBNEO_01562	5.61e-138	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
CGAFBNEO_01563	2.47e-107	-	-	-	-	-	-	-	-
CGAFBNEO_01564	0.0	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
CGAFBNEO_01565	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
CGAFBNEO_01566	0.0	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
CGAFBNEO_01567	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Ribonucleoside-triphosphate reductase
CGAFBNEO_01568	1.35e-180	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CGAFBNEO_01569	1.69e-132	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
CGAFBNEO_01570	2.19e-292	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
CGAFBNEO_01571	1.62e-277	yqjV	-	-	EGP	-	-	-	Major Facilitator Superfamily
CGAFBNEO_01572	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
CGAFBNEO_01573	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
CGAFBNEO_01574	6.55e-97	-	-	-	-	-	-	-	-
CGAFBNEO_01575	3.75e-48	-	-	-	S	-	-	-	PFAM Archaeal ATPase
CGAFBNEO_01577	4.53e-76	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
CGAFBNEO_01578	3.61e-60	-	-	-	-	-	-	-	-
CGAFBNEO_01579	1.44e-234	-	-	-	L	-	-	-	Phage integrase family
CGAFBNEO_01580	3.94e-85	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
CGAFBNEO_01581	3.22e-103	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CGAFBNEO_01582	1.06e-185	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
CGAFBNEO_01583	2.96e-173	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CGAFBNEO_01584	1.58e-201	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CGAFBNEO_01585	1.02e-198	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CGAFBNEO_01586	2.23e-80	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
CGAFBNEO_01587	3.62e-218	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CGAFBNEO_01588	3.82e-82	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CGAFBNEO_01589	2.07e-73	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CGAFBNEO_01590	1.89e-21	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
CGAFBNEO_01591	3.13e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CGAFBNEO_01592	1.51e-154	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
CGAFBNEO_01593	1.2e-299	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
CGAFBNEO_01594	4.95e-93	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
CGAFBNEO_01595	2.22e-34	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
CGAFBNEO_01596	3.73e-110	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CGAFBNEO_01597	4.84e-73	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CGAFBNEO_01598	7.18e-121	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CGAFBNEO_01599	6.53e-89	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CGAFBNEO_01600	1e-39	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CGAFBNEO_01601	1.23e-123	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CGAFBNEO_01602	3.03e-44	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CGAFBNEO_01603	3.62e-79	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CGAFBNEO_01604	1.56e-55	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CGAFBNEO_01605	1.45e-34	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
CGAFBNEO_01606	1.66e-100	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CGAFBNEO_01607	1.44e-155	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CGAFBNEO_01608	9.07e-73	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CGAFBNEO_01609	1.14e-62	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CGAFBNEO_01610	3.3e-197	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CGAFBNEO_01611	1.14e-63	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
CGAFBNEO_01612	4.68e-138	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
CGAFBNEO_01613	6.64e-146	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CGAFBNEO_01614	6.34e-66	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
CGAFBNEO_01615	6.18e-123	rihC	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
CGAFBNEO_01616	1.07e-93	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CGAFBNEO_01617	9.64e-38	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
CGAFBNEO_01618	8.69e-76	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CGAFBNEO_01619	1.52e-193	add	3.5.4.2, 3.5.4.4	-	F	ko:K01488,ko:K02029,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CGAFBNEO_01620	7.08e-254	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
CGAFBNEO_01621	6.85e-109	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
CGAFBNEO_01622	5.03e-256	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
CGAFBNEO_01623	1.77e-157	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CGAFBNEO_01624	9.22e-141	yqeK	-	-	H	-	-	-	Hydrolase, HD family
CGAFBNEO_01625	5.95e-77	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
CGAFBNEO_01626	8.01e-276	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
CGAFBNEO_01627	2.19e-125	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
CGAFBNEO_01628	3.52e-163	csrR	-	-	K	-	-	-	response regulator
CGAFBNEO_01629	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
CGAFBNEO_01630	2.19e-18	-	-	-	-	-	-	-	-
CGAFBNEO_01631	8.01e-123	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
CGAFBNEO_01632	2.95e-283	-	-	-	S	-	-	-	SLAP domain
CGAFBNEO_01633	3.23e-108	-	-	-	S	ko:K19055	-	ko00000,ko01000,ko03016	Aminoacyl-tRNA editing domain
CGAFBNEO_01634	8.13e-215	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
CGAFBNEO_01635	5.58e-59	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
CGAFBNEO_01636	5.59e-173	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CGAFBNEO_01637	3.71e-76	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
CGAFBNEO_01639	2.9e-31	glnP9	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter, permease protein
CGAFBNEO_01640	3.56e-47	-	-	-	-	-	-	-	-
CGAFBNEO_01641	4.13e-83	-	-	-	-	-	-	-	-
CGAFBNEO_01644	1.51e-159	-	-	-	-	-	-	-	-
CGAFBNEO_01645	4.83e-136	pncA	-	-	Q	-	-	-	Isochorismatase family
CGAFBNEO_01646	1.24e-08	-	-	-	-	-	-	-	-
CGAFBNEO_01647	2.9e-48	-	-	-	-	-	-	-	-
CGAFBNEO_01648	0.0	snf	-	-	KL	-	-	-	domain protein
CGAFBNEO_01649	9.39e-141	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
CGAFBNEO_01650	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
CGAFBNEO_01651	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
CGAFBNEO_01652	1.11e-234	-	-	-	K	-	-	-	Transcriptional regulator
CGAFBNEO_01653	1.05e-221	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
CGAFBNEO_01654	1.17e-144	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CGAFBNEO_01655	5.03e-76	-	-	-	K	-	-	-	Helix-turn-helix domain
CGAFBNEO_01657	1.65e-303	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
CGAFBNEO_01658	1.43e-80	-	-	-	S	ko:K07006	-	ko00000	Pyridoxamine 5'-phosphate oxidase
CGAFBNEO_01659	5.93e-302	XK27_01810	-	-	S	-	-	-	Calcineurin-like phosphoesterase
CGAFBNEO_01661	0.0	-	-	-	S	-	-	-	SLAP domain
CGAFBNEO_01662	0.0	hsdR	3.1.21.3	-	L	ko:K01153	-	ko00000,ko01000,ko02048	DEAD/DEAH box helicase
CGAFBNEO_01663	1.35e-208	-	-	-	S	ko:K06926	-	ko00000	AAA domain, putative AbiEii toxin, Type IV TA system
CGAFBNEO_01664	2.6e-54	-	-	-	S	-	-	-	RloB-like protein
CGAFBNEO_01665	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
CGAFBNEO_01666	2.94e-118	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
CGAFBNEO_01667	4.81e-77	-	-	-	S	-	-	-	SIR2-like domain
CGAFBNEO_01669	0.0	XK27_08315	-	-	M	-	-	-	Sulfatase
CGAFBNEO_01670	1.03e-145	plsY1	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
CGAFBNEO_01671	2.4e-257	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
CGAFBNEO_01672	5.18e-128	-	-	-	G	-	-	-	Aldose 1-epimerase
CGAFBNEO_01673	4.51e-171	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CGAFBNEO_01674	1.72e-149	-	-	-	-	-	-	-	-
CGAFBNEO_01675	1.98e-168	-	-	-	-	-	-	-	-
CGAFBNEO_01676	1.68e-207	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
CGAFBNEO_01677	2.47e-138	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
CGAFBNEO_01678	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
CGAFBNEO_01679	8.93e-233	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
CGAFBNEO_01680	1.04e-286	-	-	-	NU	-	-	-	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
CGAFBNEO_01682	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
CGAFBNEO_01683	3.56e-281	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
CGAFBNEO_01684	0.0	lacZ	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	-beta-galactosidase
CGAFBNEO_01685	0.0	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
CGAFBNEO_01686	1.48e-210	lacR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
CGAFBNEO_01687	0.0	lacL	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
CGAFBNEO_01688	4.35e-185	lacM	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
CGAFBNEO_01689	4.71e-239	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
CGAFBNEO_01690	4.05e-209	-	-	-	S	-	-	-	Nucleotidyl transferase AbiEii toxin, Type IV TA system
CGAFBNEO_01691	5.55e-137	-	-	-	K	-	-	-	Transcriptional regulator, AbiEi antitoxin
CGAFBNEO_01692	4.05e-242	-	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding protein-like domain
CGAFBNEO_01693	2.1e-160	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
CGAFBNEO_01694	1.85e-205	-	-	-	S	-	-	-	Phospholipase, patatin family
CGAFBNEO_01695	7.44e-189	-	-	-	S	-	-	-	hydrolase
CGAFBNEO_01696	0.0	glvC	2.7.1.208	-	G	ko:K02749,ko:K02750	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
CGAFBNEO_01697	6.89e-190	glvR	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
CGAFBNEO_01698	1.52e-103	-	-	-	-	-	-	-	-
CGAFBNEO_01699	1.96e-113	ptbA	2.7.1.208	-	G	ko:K02755,ko:K02777,ko:K20107,ko:K20108	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
CGAFBNEO_01700	1.76e-52	-	-	-	-	-	-	-	-
CGAFBNEO_01701	2.14e-154	-	-	-	C	-	-	-	nitroreductase
CGAFBNEO_01702	0.0	yhdP	-	-	S	-	-	-	Transporter associated domain
CGAFBNEO_01703	8.59e-133	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
CGAFBNEO_01704	0.0	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
CGAFBNEO_01705	5e-113	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
CGAFBNEO_01706	5.83e-67	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
CGAFBNEO_01707	6.74e-269	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
CGAFBNEO_01708	7.32e-157	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
CGAFBNEO_01709	1.93e-32	-	-	-	G	-	-	-	Peptidase_C39 like family
CGAFBNEO_01710	2.16e-207	-	-	-	M	-	-	-	NlpC/P60 family
CGAFBNEO_01711	6.67e-115	-	-	-	G	-	-	-	Peptidase_C39 like family
CGAFBNEO_01712	1.09e-223	pepI	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
CGAFBNEO_01713	2.05e-115	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
CGAFBNEO_01714	0.0	-	-	-	S	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CGAFBNEO_01715	1.05e-222	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
CGAFBNEO_01716	1.16e-207	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
CGAFBNEO_01717	1.43e-125	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
CGAFBNEO_01718	7.23e-244	ysdE	-	-	P	-	-	-	Citrate transporter
CGAFBNEO_01719	1.69e-60	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
CGAFBNEO_01720	0.0	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
CGAFBNEO_01721	9.69e-25	-	-	-	-	-	-	-	-
CGAFBNEO_01722	1.34e-09	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
CGAFBNEO_01723	1.17e-239	-	-	-	M	-	-	-	Glycosyl transferase
CGAFBNEO_01724	3.67e-225	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
CGAFBNEO_01725	1.11e-154	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
CGAFBNEO_01726	2.42e-204	-	-	-	L	-	-	-	HNH nucleases
CGAFBNEO_01727	1.4e-191	yhaH	-	-	S	-	-	-	Protein of unknown function (DUF805)
CGAFBNEO_01728	2.89e-173	glnQ	-	-	E	ko:K17076	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CGAFBNEO_01729	0.0	XK27_05795	-	-	P	ko:K17073,ko:K17074	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CGAFBNEO_01730	1.41e-155	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
CGAFBNEO_01731	1.54e-84	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
CGAFBNEO_01732	9.4e-164	terC	-	-	P	-	-	-	Integral membrane protein TerC family
CGAFBNEO_01733	1.25e-119	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	6-O-methylguanine DNA methyltransferase, DNA binding domain
CGAFBNEO_01734	1.24e-169	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
CGAFBNEO_01735	4.12e-204	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
CGAFBNEO_01736	2.29e-112	-	-	-	-	-	-	-	-
CGAFBNEO_01737	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CGAFBNEO_01738	1.51e-233	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
CGAFBNEO_01739	2.94e-189	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CGAFBNEO_01740	7.53e-186	-	-	-	S	-	-	-	Protein of unknown function (DUF1002)
CGAFBNEO_01741	2.62e-199	epsV	-	-	S	-	-	-	glycosyl transferase family 2
CGAFBNEO_01742	4.69e-158	-	-	-	S	-	-	-	Alpha/beta hydrolase family
CGAFBNEO_01743	5.02e-190	-	-	-	K	-	-	-	Helix-turn-helix domain
CGAFBNEO_01745	2.7e-79	-	-	-	-	-	-	-	-
CGAFBNEO_01747	2.15e-253	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
CGAFBNEO_01748	5.46e-181	noxC	1.5.1.39	-	C	ko:K19286	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	coenzyme F420-1:gamma-L-glutamate ligase activity
CGAFBNEO_01749	1.45e-232	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CGAFBNEO_01750	8.37e-161	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CGAFBNEO_01751	2.62e-176	-	-	-	-	-	-	-	-
CGAFBNEO_01752	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
CGAFBNEO_01753	5.01e-171	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CGAFBNEO_01754	7.36e-291	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
CGAFBNEO_01755	2.43e-263	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
CGAFBNEO_01756	3.47e-164	-	-	-	-	-	-	-	-
CGAFBNEO_01757	1.69e-258	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
CGAFBNEO_01758	7.8e-167	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
CGAFBNEO_01759	1.2e-202	-	-	-	I	-	-	-	alpha/beta hydrolase fold
CGAFBNEO_01760	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 31 family
CGAFBNEO_01761	7.25e-276	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CGAFBNEO_01762	3.47e-19	-	-	-	-	ko:K07473	-	ko00000,ko02048	-
CGAFBNEO_01764	4.83e-117	ntd	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside
CGAFBNEO_01765	6.51e-114	-	2.7.1.200, 2.7.1.204	-	G	ko:K02773,ko:K20112	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CGAFBNEO_01766	1.02e-190	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
CGAFBNEO_01767	3.92e-110	usp5	-	-	T	-	-	-	universal stress protein
CGAFBNEO_01769	1.78e-212	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphonate ABC transporter
CGAFBNEO_01770	6.34e-180	phnC	3.6.3.28	-	P	ko:K02041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
CGAFBNEO_01771	4.7e-169	phnB	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CGAFBNEO_01772	1.29e-190	-	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CGAFBNEO_01773	8.64e-107	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CGAFBNEO_01774	3.17e-224	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
CGAFBNEO_01775	1.19e-188	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
CGAFBNEO_01776	7.44e-192	yycI	-	-	S	-	-	-	YycH protein
CGAFBNEO_01777	0.0	yycH	-	-	S	-	-	-	YycH protein
CGAFBNEO_01778	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
CGAFBNEO_01779	3.98e-169	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
CGAFBNEO_01781	1.09e-46	-	-	-	-	-	-	-	-
CGAFBNEO_01783	4.19e-192	-	-	-	I	-	-	-	Acyl-transferase
CGAFBNEO_01784	7.23e-201	arbx	-	-	M	-	-	-	Glycosyl transferase family 8
CGAFBNEO_01785	1.91e-236	-	-	-	M	-	-	-	Glycosyl transferase family 8
CGAFBNEO_01786	5.48e-235	-	-	-	M	-	-	-	Glycosyl transferase family 8
CGAFBNEO_01787	3.92e-215	arbZ	-	-	I	-	-	-	Phosphate acyltransferases
CGAFBNEO_01788	3.37e-50	-	-	-	S	-	-	-	Cytochrome B5
CGAFBNEO_01789	1.38e-107	-	-	-	J	-	-	-	FR47-like protein
CGAFBNEO_01790	3.11e-13	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CGAFBNEO_01792	0.0	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
CGAFBNEO_01793	2.37e-190	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
CGAFBNEO_01794	8.74e-62	-	-	-	-	-	-	-	-
CGAFBNEO_01795	2.88e-105	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
CGAFBNEO_01796	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
CGAFBNEO_01797	2.19e-49	-	-	-	S	-	-	-	Alpha beta hydrolase
CGAFBNEO_01798	2.1e-82	-	-	-	S	-	-	-	Alpha beta hydrolase
CGAFBNEO_01799	8.51e-50	-	-	-	-	-	-	-	-
CGAFBNEO_01800	4.33e-69	-	-	-	-	-	-	-	-
CGAFBNEO_01801	6.92e-145	supH	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
CGAFBNEO_01802	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
CGAFBNEO_01803	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
CGAFBNEO_01804	1.82e-86	yusI	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	Belongs to the ArsC family
CGAFBNEO_01805	3.02e-228	lipA	-	-	I	-	-	-	Carboxylesterase family
CGAFBNEO_01807	6.84e-140	int3	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CGAFBNEO_01808	1.35e-71	ytpP	-	-	CO	-	-	-	Thioredoxin
CGAFBNEO_01809	4.18e-155	XK27_10290	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
CGAFBNEO_01810	2.05e-248	-	-	-	-	-	-	-	-
CGAFBNEO_01811	3.8e-315	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
CGAFBNEO_01812	3.31e-299	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
CGAFBNEO_01813	3.61e-220	-	-	-	S	-	-	-	SLAP domain
CGAFBNEO_01814	4.2e-93	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
CGAFBNEO_01815	4.5e-107	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
CGAFBNEO_01816	9.84e-108	-	-	-	L	-	-	-	Resolvase, N-terminal
CGAFBNEO_01817	1.86e-197	-	-	-	M	-	-	-	Peptidase family M1 domain
CGAFBNEO_01818	1.79e-245	-	-	-	S	-	-	-	Bacteriocin helveticin-J
CGAFBNEO_01819	2.39e-26	-	-	-	-	-	-	-	-
CGAFBNEO_01820	1.8e-66	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
CGAFBNEO_01821	2.27e-191	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
CGAFBNEO_01822	1.62e-250	purD	6.3.4.13	-	F	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the GARS family
CGAFBNEO_01823	4.37e-106	-	-	-	L	-	-	-	DDE superfamily endonuclease
CGAFBNEO_01824	5.53e-147	-	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
CGAFBNEO_01825	4.31e-175	-	-	-	-	-	-	-	-
CGAFBNEO_01826	4.52e-126	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
CGAFBNEO_01827	4.28e-187	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
CGAFBNEO_01828	2.96e-23	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
CGAFBNEO_01829	3.09e-71	-	-	-	-	-	-	-	-
CGAFBNEO_01830	1.6e-272	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
CGAFBNEO_01831	1.23e-231	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
CGAFBNEO_01832	0.0	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
CGAFBNEO_01833	9.89e-74	-	-	-	-	-	-	-	-
CGAFBNEO_01834	0.0	sasH	3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45	-	F	ko:K01081,ko:K01119,ko:K07004,ko:K08693,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
CGAFBNEO_01835	4.25e-119	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
CGAFBNEO_01836	6.38e-184	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
CGAFBNEO_01837	2.15e-137	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
CGAFBNEO_01838	6.9e-150	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
CGAFBNEO_01839	1.76e-234	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
CGAFBNEO_01840	9.73e-132	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
CGAFBNEO_01841	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
CGAFBNEO_01842	3.91e-268	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
CGAFBNEO_01843	9.94e-71	ylbG	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2129)
CGAFBNEO_01844	5.21e-126	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
CGAFBNEO_01845	7.07e-107	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CGAFBNEO_01846	1.42e-244	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
CGAFBNEO_01847	1.1e-125	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
CGAFBNEO_01848	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
CGAFBNEO_01849	2.57e-226	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
CGAFBNEO_01850	3.64e-46	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
CGAFBNEO_01851	7.11e-57	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CGAFBNEO_01852	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CGAFBNEO_01853	5.2e-189	-	-	-	-	-	-	-	-
CGAFBNEO_01854	1.5e-27	-	-	-	S	-	-	-	Enterocin A Immunity
CGAFBNEO_01856	1.23e-54	-	-	-	V	ko:K20345	ko02024,map02024	ko00000,ko00001,ko02000	HlyD family secretion protein
CGAFBNEO_01857	0.0	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
CGAFBNEO_01858	1.64e-101	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
CGAFBNEO_01859	1.72e-97	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
CGAFBNEO_01862	2.02e-35	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
CGAFBNEO_01863	9.66e-12	-	-	-	-	-	-	-	-
CGAFBNEO_01864	2.29e-274	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
CGAFBNEO_01865	3.98e-116	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
CGAFBNEO_01867	9.44e-107	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CGAFBNEO_01868	2e-90	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CGAFBNEO_01869	5.14e-86	-	-	-	S	ko:K07052	-	ko00000	CAAX amino terminal protease
CGAFBNEO_01874	8.14e-21	-	-	-	S	-	-	-	Enterocin A Immunity
CGAFBNEO_01875	6.53e-93	ybbB	-	-	S	-	-	-	Protein of unknown function (DUF1211)
CGAFBNEO_01876	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
CGAFBNEO_01877	1.28e-228	pepR	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
CGAFBNEO_01878	1.75e-168	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
CGAFBNEO_01879	7.89e-241	-	-	-	T	-	-	-	GHKL domain
CGAFBNEO_01880	5.81e-98	ykoJ	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
CGAFBNEO_01881	5.59e-109	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
CGAFBNEO_01882	8e-108	XK27_03150	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
CGAFBNEO_01883	8.64e-85	yybA	-	-	K	-	-	-	Transcriptional regulator
CGAFBNEO_01884	2.91e-83	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter transmembrane region
CGAFBNEO_01885	9.18e-201	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter transmembrane region
CGAFBNEO_01886	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CGAFBNEO_01887	1.73e-79	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
CGAFBNEO_01888	1.45e-36	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
CGAFBNEO_01889	2.15e-299	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
CGAFBNEO_01890	2.41e-39	-	-	-	-	-	-	-	-
CGAFBNEO_01893	4.82e-144	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CGAFBNEO_01894	1.25e-94	-	-	-	K	-	-	-	Helix-turn-helix domain
CGAFBNEO_01896	6.66e-27	-	-	-	S	-	-	-	CAAX protease self-immunity
CGAFBNEO_01897	2.67e-35	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
CGAFBNEO_01899	4.11e-124	potE	-	-	E	-	-	-	thought to be involved in transport amino acids across the membrane
CGAFBNEO_01901	2.23e-189	-	-	-	S	-	-	-	Putative ABC-transporter type IV
CGAFBNEO_01902	5.61e-38	-	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
CGAFBNEO_01903	9e-255	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
CGAFBNEO_01904	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
CGAFBNEO_01905	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
CGAFBNEO_01906	9.03e-229	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
CGAFBNEO_01907	4.11e-173	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
CGAFBNEO_01908	1.37e-216	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CGAFBNEO_01909	3.58e-129	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CGAFBNEO_01910	3.51e-224	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
CGAFBNEO_01911	1.08e-92	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
CGAFBNEO_01912	4.83e-30	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
CGAFBNEO_01913	6.94e-199	yqfL	2.7.11.33, 2.7.4.28	-	F	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
CGAFBNEO_01914	1.34e-22	-	-	-	S	-	-	-	CRISPR-associated protein (Cas_Csn2)
CGAFBNEO_01915	6.65e-287	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
CGAFBNEO_01916	3.54e-300	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
CGAFBNEO_01917	1.59e-61	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain
CGAFBNEO_01919	9.64e-307	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
CGAFBNEO_01920	2.23e-197	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CGAFBNEO_01921	5.6e-129	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
CGAFBNEO_01922	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
CGAFBNEO_01923	4.24e-217	fba	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-1,6-bisphosphate aldolase, class II
CGAFBNEO_01924	4.83e-114	-	-	-	S	-	-	-	PFAM Archaeal ATPase
CGAFBNEO_01925	2.92e-115	-	-	-	S	-	-	-	PFAM Archaeal ATPase
CGAFBNEO_01926	7.02e-36	-	-	-	-	-	-	-	-
CGAFBNEO_01927	2.34e-105	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	UbiA prenyltransferase family
CGAFBNEO_01928	5.68e-211	-	-	-	D	-	-	-	nuclear chromosome segregation
CGAFBNEO_01929	8.92e-136	-	-	-	G	-	-	-	Phosphoglycerate mutase family
CGAFBNEO_01930	9.01e-115	-	-	-	G	-	-	-	Histidine phosphatase superfamily (branch 1)
CGAFBNEO_01931	1.9e-153	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
CGAFBNEO_01932	2.67e-148	glpQ1	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
CGAFBNEO_01934	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
CGAFBNEO_01936	1.93e-266	araT	2.6.1.57	-	E	ko:K00832,ko:K00841	ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
CGAFBNEO_01937	1.03e-237	XK27_10475	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
CGAFBNEO_01938	3.01e-154	rpiA1	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
CGAFBNEO_01939	1.43e-186	-	-	-	K	-	-	-	SIS domain
CGAFBNEO_01940	9.6e-309	slpX	-	-	S	-	-	-	SLAP domain
CGAFBNEO_01941	6.39e-32	-	-	-	S	-	-	-	transposase or invertase
CGAFBNEO_01942	1.18e-13	-	-	-	-	-	-	-	-
CGAFBNEO_01943	4.41e-305	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	NADH oxidase
CGAFBNEO_01946	7.83e-303	oppA2	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CGAFBNEO_01947	1.15e-54	oppA2	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CGAFBNEO_01948	2.17e-232	-	-	-	-	-	-	-	-
CGAFBNEO_01949	1.87e-159	gntR1	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
CGAFBNEO_01950	3.68e-93	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Glycerol-3-phosphate cytidylyltransferase
CGAFBNEO_01951	3.02e-171	tagA	2.4.1.187	GT26	F	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
CGAFBNEO_01952	1.03e-261	-	-	-	M	-	-	-	Glycosyl transferases group 1
CGAFBNEO_01953	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CGAFBNEO_01954	7.76e-195	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
CGAFBNEO_01955	9.83e-261	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
CGAFBNEO_01956	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
CGAFBNEO_01957	9.16e-287	-	-	-	M	-	-	-	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
CGAFBNEO_01958	0.0	epsU	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
CGAFBNEO_01959	5.48e-173	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
CGAFBNEO_01960	2.62e-109	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
CGAFBNEO_01962	2.26e-118	acmA	3.2.1.17, 3.2.1.96	-	NU	ko:K01185,ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	mannosyl-glycoprotein
CGAFBNEO_01963	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
CGAFBNEO_01964	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CGAFBNEO_01965	6.25e-268	camS	-	-	S	-	-	-	sex pheromone
CGAFBNEO_01966	5.42e-67	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CGAFBNEO_01967	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
CGAFBNEO_01968	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CGAFBNEO_01969	1.87e-217	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
CGAFBNEO_01970	2.61e-148	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
CGAFBNEO_01971	1.46e-75	-	-	-	-	-	-	-	-
CGAFBNEO_01972	9.92e-187	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
CGAFBNEO_01973	2.79e-309	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
CGAFBNEO_01974	1.01e-256	flp	-	-	V	-	-	-	Beta-lactamase
CGAFBNEO_01975	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CGAFBNEO_01976	1.42e-122	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CGAFBNEO_01981	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
CGAFBNEO_01982	1.52e-119	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CGAFBNEO_01983	0.0	-	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
CGAFBNEO_01984	6.61e-186	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
CGAFBNEO_01985	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
CGAFBNEO_01986	1.43e-310	ynbB	-	-	P	-	-	-	aluminum resistance
CGAFBNEO_01987	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
CGAFBNEO_01988	0.0	-	-	-	E	-	-	-	Amino acid permease
CGAFBNEO_01989	9.58e-122	-	-	-	C	-	-	-	Pyridoxamine 5'-phosphate oxidase
CGAFBNEO_01990	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
CGAFBNEO_01991	3.03e-145	ybgF	-	-	E	ko:K02205,ko:K03293,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
CGAFBNEO_01992	1.31e-16	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
CGAFBNEO_01993	2.95e-84	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CGAFBNEO_01994	7.64e-88	crcB1	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CGAFBNEO_01995	2.15e-194	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
CGAFBNEO_01996	1.1e-90	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
CGAFBNEO_01997	5.79e-247	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CGAFBNEO_01998	3.93e-125	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
CGAFBNEO_01999	3.69e-171	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
CGAFBNEO_02000	8.72e-111	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
CGAFBNEO_02001	4.27e-167	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
CGAFBNEO_02002	3.05e-200	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CGAFBNEO_02003	1.4e-80	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
CGAFBNEO_02004	8.4e-199	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
CGAFBNEO_02005	1.58e-70	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
CGAFBNEO_02006	1.15e-146	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CGAFBNEO_02007	1.18e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2508)
CGAFBNEO_02008	9.21e-142	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CGAFBNEO_02009	6.31e-68	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CGAFBNEO_02010	1.15e-47	-	-	-	M	-	-	-	lipopolysaccharide 3-alpha-galactosyltransferase activity
CGAFBNEO_02011	1.12e-136	-	-	-	M	-	-	-	family 8
CGAFBNEO_02012	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CGAFBNEO_02013	3.03e-110	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
CGAFBNEO_02016	5.22e-125	-	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	VirC1 protein
CGAFBNEO_02018	3.54e-53	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
CGAFBNEO_02019	6.8e-48	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	Bacterial toxin of type II toxin-antitoxin system, YafQ
CGAFBNEO_02020	4.82e-102	-	-	-	V	-	-	-	Type I restriction modification DNA specificity domain
CGAFBNEO_02021	9.47e-300	-	-	-	V	-	-	-	N-6 DNA Methylase
CGAFBNEO_02023	2.19e-87	doc	-	-	S	ko:K07341	-	ko00000,ko02048	Fic/DOC family
CGAFBNEO_02024	2.78e-45	-	-	-	-	-	-	-	-
CGAFBNEO_02026	2.74e-28	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
CGAFBNEO_02028	1.03e-154	-	-	-	L	-	-	-	This gene contains a nucleotide ambiguity which may be the result of a sequencing error
CGAFBNEO_02031	1.61e-70	-	-	-	-	-	-	-	-
CGAFBNEO_02032	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
CGAFBNEO_02033	6.39e-102	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CGAFBNEO_02034	9.3e-221	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
CGAFBNEO_02035	1.44e-255	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
CGAFBNEO_02036	0.0	carB1	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
CGAFBNEO_02037	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
CGAFBNEO_02038	2.06e-88	-	-	-	-	-	-	-	-
CGAFBNEO_02039	1.15e-204	-	-	-	S	-	-	-	EDD domain protein, DegV family
CGAFBNEO_02040	0.0	phoR	2.7.13.3	-	T	ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
CGAFBNEO_02041	4.28e-153	phoB	-	-	T	ko:K07658	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C terminal
CGAFBNEO_02042	6.07e-138	-	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
CGAFBNEO_02043	4.66e-179	pstB	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CGAFBNEO_02044	8.63e-195	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
CGAFBNEO_02045	8.73e-205	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
CGAFBNEO_02046	9.14e-187	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
CGAFBNEO_02047	4.84e-42	-	-	-	-	-	-	-	-
CGAFBNEO_02048	1.27e-255	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CGAFBNEO_02049	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
CGAFBNEO_02050	1.05e-40	-	-	-	-	-	-	-	-
CGAFBNEO_02051	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CGAFBNEO_02052	2.24e-198	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
CGAFBNEO_02053	2.16e-136	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CGAFBNEO_02054	3.04e-105	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CGAFBNEO_02055	9.36e-317	dnaB2	-	-	L	ko:K03346	-	ko00000,ko03032	Replication initiation and membrane attachment
CGAFBNEO_02056	1.31e-215	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
CGAFBNEO_02057	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CGAFBNEO_02058	2.28e-97	-	-	-	-	-	-	-	-
CGAFBNEO_02059	4.63e-32	-	-	-	-	-	-	-	-
CGAFBNEO_02060	6.72e-177	-	-	-	EP	-	-	-	Plasmid replication protein
CGAFBNEO_02061	8.28e-102	-	-	-	S	-	-	-	helix_turn_helix, Deoxyribose operon repressor
CGAFBNEO_02062	6.33e-221	ulaG	-	-	S	ko:K03476	ko00053,ko01100,ko01120,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Beta-lactamase superfamily domain
CGAFBNEO_02063	4.93e-80	-	2.7.1.194	-	G	ko:K02821	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CGAFBNEO_02064	1.14e-293	sgaT	-	-	S	ko:K03475	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
CGAFBNEO_02065	4.82e-42	ulaB	2.7.1.194	-	G	ko:K02822	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
CGAFBNEO_02066	2.85e-115	ulaD	4.1.1.85, 4.1.2.43	-	G	ko:K03078,ko:K08093	ko00030,ko00040,ko00053,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00040,map00053,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Orotidine 5'-phosphate decarboxylase / HUMPS family
CGAFBNEO_02067	1.78e-163	sga	5.1.3.22	-	G	ko:K03079	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Xylose isomerase-like TIM barrel
CGAFBNEO_02068	1.52e-157	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
CGAFBNEO_02069	5.85e-86	nt5e	3.1.3.18	-	L	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	haloacid dehalogenase-like hydrolase
CGAFBNEO_02071	7.23e-50	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
CGAFBNEO_02072	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
CGAFBNEO_02073	2.27e-179	-	-	-	-	-	-	-	-
CGAFBNEO_02077	2.23e-48	-	-	-	-	-	-	-	-
CGAFBNEO_02078	2.52e-76	-	-	-	S	-	-	-	Cupredoxin-like domain
CGAFBNEO_02079	4.44e-65	-	-	-	S	-	-	-	Cupredoxin-like domain
CGAFBNEO_02080	0.0	copA	3.6.3.3, 3.6.3.5, 3.6.3.54	-	P	ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
CGAFBNEO_02081	6.63e-147	crp2	-	-	K	ko:K10914,ko:K21562	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	helix_turn_helix, cAMP Regulatory protein
CGAFBNEO_02082	7.41e-136	-	-	-	-	-	-	-	-
CGAFBNEO_02083	1.03e-65	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
CGAFBNEO_02084	1.48e-84	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
CGAFBNEO_02085	0.0	mngB	3.2.1.170	GH38	G	ko:K15524	-	ko00000,ko01000	Glycosyl hydrolases family 38 N-terminal domain
CGAFBNEO_02086	8.13e-169	-	-	-	G	ko:K03491	-	ko00000,ko03000	Mga helix-turn-helix domain
CGAFBNEO_02087	0.0	-	3.2.1.170, 3.2.1.24	GH38	G	ko:K01191,ko:K15524	ko00511,map00511	ko00000,ko00001,ko01000,ko04131	Glycosyl hydrolases family 38 N-terminal domain
CGAFBNEO_02088	4.34e-198	fptC	-	-	U	ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	system, fructose-specific IIC component
CGAFBNEO_02089	5.84e-50	-	-	-	G	-	-	-	Psort location Cytoplasmic, score 9.98
CGAFBNEO_02090	2.4e-54	-	2.7.1.202	-	G	ko:K02768	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CGAFBNEO_02093	7.29e-209	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
CGAFBNEO_02094	8.52e-215	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CGAFBNEO_02095	1.82e-161	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CGAFBNEO_02096	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
CGAFBNEO_02097	1.01e-222	rihC	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
CGAFBNEO_02098	6.63e-174	gntR	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
CGAFBNEO_02099	3.18e-198	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
CGAFBNEO_02100	2.9e-79	-	-	-	S	-	-	-	Enterocin A Immunity
CGAFBNEO_02101	4.44e-174	-	-	-	K	ko:K22103	-	ko00000,ko03000	DeoR C terminal sensor domain
CGAFBNEO_02102	8.49e-85	-	-	-	E	-	-	-	amino acid
CGAFBNEO_02103	6.08e-161	yagE	-	-	E	-	-	-	Amino acid permease
CGAFBNEO_02104	9.58e-112	-	3.4.21.96	-	S	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	SLAP domain
CGAFBNEO_02105	6.68e-205	XK27_10395	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CGAFBNEO_02106	5.13e-287	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
CGAFBNEO_02107	1.8e-143	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
CGAFBNEO_02108	8.83e-187	degV3	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
CGAFBNEO_02109	9.85e-49	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
CGAFBNEO_02110	3.67e-88	-	-	-	P	-	-	-	NhaP-type Na H and K H
CGAFBNEO_02111	7.2e-49	nhaP4	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
CGAFBNEO_02112	2.4e-118	nhaP4	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
CGAFBNEO_02113	2.15e-198	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CGAFBNEO_02114	1e-168	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CGAFBNEO_02115	1.5e-195	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
CGAFBNEO_02116	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CGAFBNEO_02117	8.35e-315	trmFO	2.1.1.74	-	J	ko:K04094	-	ko00000,ko01000,ko03016,ko03036	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
CGAFBNEO_02118	5.99e-180	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Phage integrase, N-terminal SAM-like domain
CGAFBNEO_02119	4.67e-116	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CGAFBNEO_02120	1.4e-313	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
CGAFBNEO_02121	9.4e-232	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
CGAFBNEO_02122	6.42e-110	-	-	-	C	-	-	-	Aldo keto reductase
CGAFBNEO_02123	2.73e-112	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CGAFBNEO_02124	3.93e-05	-	-	-	-	-	-	-	-
CGAFBNEO_02126	2.91e-21	-	-	-	S	-	-	-	protein disulfide oxidoreductase activity
CGAFBNEO_02127	2.51e-15	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CGAFBNEO_02131	1.35e-07	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CGAFBNEO_02135	4.4e-68	-	-	-	S	-	-	-	Protein of unknown function (DUF1351)
CGAFBNEO_02136	1.14e-58	-	-	-	S	-	-	-	ERF superfamily
CGAFBNEO_02137	1.01e-35	-	-	-	K	-	-	-	Conserved phage C-terminus (Phg_2220_C)
CGAFBNEO_02139	5.95e-24	radC	-	-	E	ko:K03630	-	ko00000	Belongs to the UPF0758 family
CGAFBNEO_02155	7.58e-90	-	-	-	S	-	-	-	ORF6C domain
CGAFBNEO_02157	1.72e-48	-	-	-	S	-	-	-	VRR_NUC
CGAFBNEO_02165	9.77e-27	-	-	-	S	-	-	-	N-methyltransferase activity
CGAFBNEO_02168	1.16e-231	-	-	-	S	-	-	-	Terminase-like family
CGAFBNEO_02169	4.63e-110	-	-	-	S	ko:K09961	-	ko00000	Protein of unknown function (DUF1073)
CGAFBNEO_02170	7.62e-69	-	-	-	S	-	-	-	Phage Mu protein F like protein
CGAFBNEO_02171	9.61e-28	-	-	-	S	-	-	-	Lysin motif
CGAFBNEO_02172	4.2e-72	-	-	-	S	ko:K09960	-	ko00000	Uncharacterized protein conserved in bacteria (DUF2213)
CGAFBNEO_02173	6.37e-25	-	-	-	-	-	-	-	-
CGAFBNEO_02175	5.49e-36	-	-	-	S	-	-	-	Protein of unknown function (DUF4054)
CGAFBNEO_02176	5.56e-22	-	-	-	-	-	-	-	-
CGAFBNEO_02179	2.86e-168	-	-	-	S	-	-	-	Protein of unknown function (DUF3383)
CGAFBNEO_02182	8.32e-236	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
CGAFBNEO_02183	7.64e-54	-	-	-	M	-	-	-	LysM domain
CGAFBNEO_02184	9.82e-61	-	-	-	-	-	-	-	-
CGAFBNEO_02185	4.27e-94	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	domain protein
CGAFBNEO_02186	0.0	-	-	-	S	-	-	-	Fibronectin type III domain
CGAFBNEO_02187	7.03e-307	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CGAFBNEO_02188	9.39e-71	-	-	-	-	-	-	-	-
CGAFBNEO_02190	0.0	pepC2	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
CGAFBNEO_02191	1.77e-157	ypgQ	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
CGAFBNEO_02192	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CGAFBNEO_02193	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CGAFBNEO_02194	1.28e-292	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
CGAFBNEO_02195	8.73e-187	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
CGAFBNEO_02196	9.01e-287	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
CGAFBNEO_02197	3.87e-80	yneE	-	-	K	-	-	-	Transcriptional regulator
CGAFBNEO_02198	2.18e-122	yneE	-	-	K	-	-	-	Transcriptional regulator
CGAFBNEO_02199	3.58e-61	-	-	-	S	ko:K07124	-	ko00000	Enoyl-(Acyl carrier protein) reductase
CGAFBNEO_02200	5.05e-11	-	-	-	-	-	-	-	-
CGAFBNEO_02201	3.69e-54	-	-	-	L	ko:K07473	-	ko00000,ko02048	Addiction module antitoxin, RelB DinJ family
CGAFBNEO_02202	2.29e-162	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
CGAFBNEO_02203	8.06e-110	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
CGAFBNEO_02204	3.31e-154	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
CGAFBNEO_02205	1.49e-44	-	-	-	-	-	-	-	-
CGAFBNEO_02206	2.52e-52	-	-	-	-	-	-	-	-
CGAFBNEO_02207	5.7e-209	-	-	-	EG	-	-	-	EamA-like transporter family
CGAFBNEO_02208	6.7e-211	-	-	-	EG	-	-	-	EamA-like transporter family
CGAFBNEO_02209	1.28e-106	yicL	-	-	EG	-	-	-	EamA-like transporter family
CGAFBNEO_02210	7.81e-107	-	-	-	-	-	-	-	-
CGAFBNEO_02211	1.06e-141	-	-	-	-	-	-	-	-
CGAFBNEO_02212	2.39e-182	-	-	-	S	-	-	-	DUF218 domain
CGAFBNEO_02213	0.0	yheS_2	-	-	S	ko:K18231,ko:K19349	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ATPases associated with a variety of cellular activities
CGAFBNEO_02214	8.23e-112	-	-	-	-	-	-	-	-
CGAFBNEO_02215	1.09e-74	-	-	-	-	-	-	-	-
CGAFBNEO_02216	7.26e-35	-	-	-	S	-	-	-	Protein conserved in bacteria
CGAFBNEO_02217	2.27e-71	-	-	-	S	-	-	-	protein encoded in hypervariable junctions of pilus gene clusters
CGAFBNEO_02218	1.58e-101	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
CGAFBNEO_02219	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
CGAFBNEO_02220	1.3e-40	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
CGAFBNEO_02221	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
CGAFBNEO_02222	5.35e-224	mprF	-	-	S	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CGAFBNEO_02223	3.68e-256	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
CGAFBNEO_02224	1.72e-286	-	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyl transferase 4-like domain
CGAFBNEO_02230	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CGAFBNEO_02231	5.38e-39	-	-	-	-	-	-	-	-
CGAFBNEO_02232	0.0	pox1	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
CGAFBNEO_02233	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
CGAFBNEO_02234	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
CGAFBNEO_02235	3.37e-192	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
CGAFBNEO_02236	2.65e-81	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
CGAFBNEO_02237	3.26e-23	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
CGAFBNEO_02241	0.0	sacB	2.4.1.10, 2.4.1.9	GH68	M	ko:K00692,ko:K20811	ko00500,ko01100,ko02020,map00500,map01100,map02020	ko00000,ko00001,ko01000,ko01003	Levansucrase/Invertase
CGAFBNEO_02242	1.57e-78	-	-	-	V	-	-	-	Abi-like protein
CGAFBNEO_02243	0.0	-	-	-	L	-	-	-	AAA domain
CGAFBNEO_02245	1.58e-76	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
CGAFBNEO_02246	3.15e-259	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CGAFBNEO_02247	5.23e-229	yvdE	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
CGAFBNEO_02248	3.56e-186	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
CGAFBNEO_02249	3.57e-185	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CGAFBNEO_02250	1.31e-166	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CGAFBNEO_02251	2.61e-195	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
CGAFBNEO_02252	1.3e-31	-	-	-	-	-	-	-	-
CGAFBNEO_02253	1.34e-175	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CGAFBNEO_02255	1.49e-151	-	-	-	V	-	-	-	Abi-like protein
CGAFBNEO_02256	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
CGAFBNEO_02257	1.98e-41	-	-	-	E	-	-	-	Zn peptidase
CGAFBNEO_02258	8.29e-76	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CGAFBNEO_02259	4.75e-58	-	-	-	-	-	-	-	-
CGAFBNEO_02260	4.54e-135	-	-	-	S	-	-	-	Bacteriocin helveticin-J
CGAFBNEO_02261	1.14e-154	-	-	-	S	-	-	-	SLAP domain
CGAFBNEO_02262	6.57e-175	-	-	-	S	-	-	-	SLAP domain
CGAFBNEO_02263	1.12e-268	-	-	-	-	-	-	-	-
CGAFBNEO_02264	6.46e-27	-	-	-	-	-	-	-	-
CGAFBNEO_02265	2.71e-222	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
CGAFBNEO_02267	1.07e-281	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CGAFBNEO_02268	4.37e-241	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
CGAFBNEO_02269	3.69e-30	-	-	-	-	-	-	-	-
CGAFBNEO_02270	1.31e-98	-	-	-	U	ko:K02248	-	ko00000,ko00002,ko02044	Putative Competence protein ComGF
CGAFBNEO_02271	1.96e-54	-	-	-	-	-	-	-	-
CGAFBNEO_02272	8.52e-93	-	-	-	-	ko:K02246	-	ko00000,ko00002,ko02044	-
CGAFBNEO_02273	7.88e-63	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	competence protein ComGC
CGAFBNEO_02274	1.72e-222	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
CGAFBNEO_02275	5.04e-231	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
CGAFBNEO_02276	5.65e-171	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
CGAFBNEO_02277	3.31e-120	-	-	-	S	-	-	-	VanZ like family
CGAFBNEO_02278	1.49e-130	ylbE	-	-	GM	-	-	-	NAD(P)H-binding
CGAFBNEO_02279	3.96e-37	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CGAFBNEO_02281	1.38e-154	-	-	-	S	-	-	-	SLAP domain
CGAFBNEO_02283	2.85e-54	-	-	-	-	-	-	-	-
CGAFBNEO_02284	3.6e-101	-	-	-	K	-	-	-	DNA-templated transcription, initiation
CGAFBNEO_02286	4.56e-191	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CGAFBNEO_02287	6.87e-27	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CGAFBNEO_02288	1.2e-89	-	-	-	S	-	-	-	SLAP domain
CGAFBNEO_02297	3.85e-49	-	-	-	S	-	-	-	VRR_NUC
CGAFBNEO_02302	1.34e-62	-	-	-	L	-	-	-	HNH nucleases
CGAFBNEO_02303	1.2e-71	-	-	-	L	-	-	-	Phage terminase, small subunit
CGAFBNEO_02304	6.84e-10	-	-	-	S	-	-	-	HicA toxin of bacterial toxin-antitoxin,
CGAFBNEO_02305	1.57e-61	-	-	-	S	-	-	-	HicB_like antitoxin of bacterial toxin-antitoxin system
CGAFBNEO_02306	1.82e-260	-	-	-	S	-	-	-	Phage Terminase
CGAFBNEO_02308	2.23e-169	-	-	-	S	-	-	-	Phage portal protein
CGAFBNEO_02309	4.37e-110	-	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S14 family
CGAFBNEO_02310	5.87e-67	-	-	-	S	-	-	-	Phage capsid family
CGAFBNEO_02318	2.66e-131	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
CGAFBNEO_02320	5.6e-158	-	-	-	S	-	-	-	Phage minor structural protein
CGAFBNEO_02329	6.5e-51	-	-	-	S	-	-	-	Bacteriophage holin of superfamily 6 (Holin_LLH)
CGAFBNEO_02330	3.25e-126	-	-	-	M	-	-	-	hydrolase, family 25
CGAFBNEO_02332	1.33e-35	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
CGAFBNEO_02333	8.29e-75	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
CGAFBNEO_02334	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
CGAFBNEO_02335	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CGAFBNEO_02336	3.69e-233	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
CGAFBNEO_02337	4.4e-47	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CGAFBNEO_02338	5.15e-247	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CGAFBNEO_02339	2.2e-227	oppF	-	-	P	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CGAFBNEO_02340	1.6e-220	oppB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CGAFBNEO_02341	9.69e-177	oppC5	-	-	P	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CGAFBNEO_02342	2.26e-148	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CGAFBNEO_02343	5.76e-144	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CGAFBNEO_02344	1.21e-19	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CGAFBNEO_02345	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CGAFBNEO_02346	8.03e-160	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
CGAFBNEO_02347	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
CGAFBNEO_02348	3.25e-231	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
CGAFBNEO_02349	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CGAFBNEO_02350	1.69e-06	-	-	-	-	-	-	-	-
CGAFBNEO_02351	2.1e-31	-	-	-	-	-	-	-	-
CGAFBNEO_02352	5.41e-172	cysA	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CGAFBNEO_02353	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
CGAFBNEO_02354	5.03e-38	-	-	-	-	-	-	-	-
CGAFBNEO_02355	3.65e-26	-	-	-	-	-	-	-	-
CGAFBNEO_02358	1.75e-26	-	-	-	S	-	-	-	Phage uncharacterised protein (Phage_XkdX)
CGAFBNEO_02359	4.17e-54	-	-	-	-	-	-	-	-
CGAFBNEO_02362	3.95e-17	-	-	-	S	-	-	-	N-acetylmuramoyl-L-alanine amidase activity
CGAFBNEO_02364	8.27e-140	-	-	-	S	-	-	-	Baseplate J-like protein
CGAFBNEO_02365	1.55e-40	-	-	-	-	-	-	-	-
CGAFBNEO_02366	3.5e-22	-	-	-	-	-	-	-	-
CGAFBNEO_02367	1.27e-311	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
CGAFBNEO_02368	8.12e-60	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
CGAFBNEO_02369	0.0	sufB	-	-	O	ko:K07033,ko:K09014	-	ko00000	assembly protein SufB
CGAFBNEO_02370	6.98e-78	nifU	-	-	C	ko:K04488	-	ko00000	SUF system FeS assembly protein, NifU family
CGAFBNEO_02371	1.39e-224	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CGAFBNEO_02372	6.22e-232	sufD	-	-	O	ko:K07033,ko:K09015	-	ko00000	FeS assembly protein SufD
CGAFBNEO_02373	4.43e-179	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	FeS assembly ATPase SufC
CGAFBNEO_02374	5.32e-35	-	-	-	C	ko:K21832	-	ko00000	nitric oxide dioxygenase activity
CGAFBNEO_02375	0.000386	-	-	-	T	ko:K07720	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Psort location Cytoplasmic, score 9.98
CGAFBNEO_02376	8.41e-42	adh2	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
CGAFBNEO_02377	5.95e-72	ykoJ	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
CGAFBNEO_02378	1.01e-174	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
CGAFBNEO_02380	3.68e-176	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CGAFBNEO_02381	3.05e-110	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin synthase
CGAFBNEO_02382	3.61e-288	ribBA	3.5.4.25, 4.1.99.12	-	H	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
CGAFBNEO_02383	1.91e-103	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
CGAFBNEO_02384	1.32e-114	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
CGAFBNEO_02385	1.16e-13	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
CGAFBNEO_02386	1.67e-32	-	-	-	-	-	-	-	-
CGAFBNEO_02387	1.94e-22	-	-	-	S	-	-	-	Domain of Unknown Function with PDB structure (DUF3850)
CGAFBNEO_02389	6.88e-11	-	-	-	T	ko:K07172	-	ko00000,ko02048	SpoVT / AbrB like domain
CGAFBNEO_02390	3.68e-14	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
CGAFBNEO_02391	5.27e-266	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CGAFBNEO_02392	2.99e-202	cinI	-	-	S	ko:K06889	-	ko00000	Serine hydrolase (FSH1)
CGAFBNEO_02393	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2207)
CGAFBNEO_02394	2.07e-38	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
CGAFBNEO_02398	4.24e-78	farR	-	-	K	-	-	-	Helix-turn-helix domain
CGAFBNEO_02399	1.75e-145	-	-	-	G	-	-	-	Fructose-bisphosphate aldolase class-II
CGAFBNEO_02400	1.14e-44	-	2.7.1.200	-	GT	ko:K02773	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CGAFBNEO_02401	5.21e-29	-	2.7.1.200	-	G	ko:K02774	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
CGAFBNEO_02402	2.59e-219	-	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
CGAFBNEO_02403	7.86e-118	-	-	-	G	-	-	-	FGGY family of carbohydrate kinases, C-terminal domain
CGAFBNEO_02404	9.63e-25	-	4.1.2.50, 4.2.3.12	-	H	ko:K01737	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000,ko03016	6-pyruvoyl tetrahydropterin synthase
CGAFBNEO_02405	1.67e-136	icaA	-	-	M	-	-	-	Glycosyl transferase family group 2
CGAFBNEO_02406	2.64e-46	-	-	-	-	-	-	-	-
CGAFBNEO_02407	1.96e-110	-	2.7.7.65	-	T	ko:K02488	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko00002,ko01000,ko02022	GGDEF domain
CGAFBNEO_02408	4.49e-99	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CGAFBNEO_02410	0.0	-	-	-	E	-	-	-	Amino acid permease
CGAFBNEO_02412	5.94e-100	-	-	-	S	ko:K06889	-	ko00000	X-Pro dipeptidyl-peptidase (S15 family)
CGAFBNEO_02413	2.25e-57	-	-	-	K	-	-	-	Tetracycline repressor, C-terminal all-alpha domain
CGAFBNEO_02415	3.49e-113	-	-	-	K	-	-	-	LysR substrate binding domain
CGAFBNEO_02416	1.59e-44	-	-	-	S	-	-	-	Domain of unknown function (DUF4440)
CGAFBNEO_02417	4.77e-87	-	-	-	GM	-	-	-	NAD(P)H-binding
CGAFBNEO_02418	1.64e-169	adh2	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
CGAFBNEO_02419	1.69e-59	-	-	-	S	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
CGAFBNEO_02420	3.98e-97	-	-	-	M	-	-	-	LysM domain
CGAFBNEO_02421	3.3e-42	-	-	-	-	-	-	-	-
CGAFBNEO_02424	2.58e-45	-	-	-	-	-	-	-	-
CGAFBNEO_02426	1.76e-85	-	-	-	EGP	-	-	-	Major Facilitator
CGAFBNEO_02427	2.3e-294	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
CGAFBNEO_02428	2.42e-74	-	-	-	EGP	-	-	-	Major Facilitator
CGAFBNEO_02431	5.89e-316	ade	3.5.4.2	-	F	ko:K01486	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	Adenine deaminase C-terminal domain
CGAFBNEO_02432	1.22e-195	-	-	-	P	ko:K02055	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
CGAFBNEO_02433	4.48e-174	potA11	3.6.3.30	-	P	ko:K02010,ko:K02052	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
CGAFBNEO_02434	4.22e-55	potC3	-	-	E	ko:K02053	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CGAFBNEO_02437	1.08e-92	-	-	-	-	-	-	-	-
CGAFBNEO_02440	3.34e-139	-	-	-	S	-	-	-	Baseplate J-like protein
CGAFBNEO_02441	3.88e-276	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
CGAFBNEO_02444	5.24e-38	-	-	-	-	-	-	-	-
CGAFBNEO_02445	4.55e-127	-	-	-	S	-	-	-	Protein of unknown function (DUF3383)
CGAFBNEO_02447	5.58e-34	-	-	-	-	-	-	-	-
CGAFBNEO_02448	4.78e-23	-	-	-	-	-	-	-	-
CGAFBNEO_02450	5.88e-118	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2184)
CGAFBNEO_02452	1.1e-83	-	-	-	S	ko:K09960	-	ko00000	Uncharacterized protein conserved in bacteria (DUF2213)
CGAFBNEO_02454	7.9e-55	-	-	-	S	-	-	-	Phage Mu protein F like protein
CGAFBNEO_02455	4.77e-165	-	-	-	S	ko:K09961	-	ko00000	Protein of unknown function (DUF1073)
CGAFBNEO_02456	9.67e-251	-	-	-	S	-	-	-	Terminase-like family
CGAFBNEO_02457	2.21e-13	-	-	-	L	ko:K07474	-	ko00000	Terminase small subunit
CGAFBNEO_02463	1.32e-273	XK27_11280	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
CGAFBNEO_02471	4.02e-140	-	-	-	L	-	-	-	Helix-turn-helix domain
CGAFBNEO_02472	5.44e-168	-	-	-	S	-	-	-	ERF superfamily
CGAFBNEO_02473	3.17e-161	-	-	-	S	-	-	-	Protein of unknown function (DUF1351)
CGAFBNEO_02474	1.07e-58	-	-	-	-	-	-	-	-
CGAFBNEO_02476	2.12e-24	-	-	-	-	-	-	-	-
CGAFBNEO_02477	4.49e-42	-	-	-	S	-	-	-	Helix-turn-helix domain
CGAFBNEO_02483	1.38e-121	-	-	-	S	-	-	-	DNA binding
CGAFBNEO_02484	2.18e-24	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CGAFBNEO_02485	3.24e-24	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CGAFBNEO_02487	7.72e-09	-	-	-	M	-	-	-	Host cell surface-exposed lipoprotein
CGAFBNEO_02489	2.22e-113	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CGAFBNEO_02490	2.16e-53	-	-	-	U	ko:K03205	ko03070,map03070	ko00000,ko00001,ko00002,ko02044	TraM recognition site of TraD and TraG
CGAFBNEO_02495	8.51e-10	-	-	-	M	-	-	-	oxidoreductase activity
CGAFBNEO_02497	3.56e-21	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
CGAFBNEO_02498	4.27e-15	-	-	-	S	-	-	-	SLAP domain
CGAFBNEO_02503	4.48e-10	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
CGAFBNEO_02510	6.37e-34	-	-	-	S	-	-	-	Domain of unknown function (DUF771)
CGAFBNEO_02511	1.68e-40	-	-	-	K	-	-	-	Helix-turn-helix domain
CGAFBNEO_02512	1.48e-22	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CGAFBNEO_02513	2.41e-38	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CGAFBNEO_02515	3.06e-53	bbsF_1	2.8.3.19	-	C	ko:K18702	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
CGAFBNEO_02516	6.43e-230	frc	2.8.3.16	-	C	ko:K07749	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
CGAFBNEO_02517	0.0	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
CGAFBNEO_02518	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
CGAFBNEO_02519	8.74e-146	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
CGAFBNEO_02520	7.01e-160	aapA	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
CGAFBNEO_02521	7.44e-129	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
CGAFBNEO_02522	1.01e-33	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CGAFBNEO_02523	5.34e-77	tnpR1	-	-	L	-	-	-	Resolvase, N terminal domain
CGAFBNEO_02525	4.26e-108	-	-	-	M	-	-	-	NlpC/P60 family
CGAFBNEO_02526	1.51e-168	cobQ	-	-	S	ko:K07009	-	ko00000	glutamine amidotransferase
CGAFBNEO_02527	6.69e-84	-	-	-	L	-	-	-	RelB antitoxin
CGAFBNEO_02528	2.83e-252	-	-	-	V	-	-	-	ABC transporter transmembrane region
CGAFBNEO_02529	5.19e-248	-	-	-	G	-	-	-	Transmembrane secretion effector
CGAFBNEO_02530	2.25e-30	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	domain protein
CGAFBNEO_02531	1.08e-217	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
CGAFBNEO_02532	9.29e-51	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
CGAFBNEO_02533	8.95e-70	-	-	-	K	-	-	-	LytTr DNA-binding domain
CGAFBNEO_02536	6.49e-137	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CGAFBNEO_02537	1.53e-122	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CGAFBNEO_02538	4.78e-261	-	-	-	S	-	-	-	Domain of unknown function (DUF389)
CGAFBNEO_02539	9.32e-109	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CGAFBNEO_02540	6.75e-216	-	-	-	K	-	-	-	LysR substrate binding domain
CGAFBNEO_02541	1.39e-156	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
CGAFBNEO_02542	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
CGAFBNEO_02546	1.28e-162	sagD	-	-	S	-	-	-	YcaO cyclodehydratase, ATP-ad Mg2+-binding
CGAFBNEO_02548	1.18e-134	fabK	1.3.1.9	-	S	ko:K02371	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Nitronate monooxygenase
CGAFBNEO_02549	8.45e-102	pct	2.8.3.1	-	I	ko:K01026	ko00620,ko00640,ko00643,ko01100,ko01120,map00620,map00640,map00643,map01100,map01120	ko00000,ko00001,ko01000	Coenzyme A transferase
CGAFBNEO_02550	5.53e-203	pct	2.8.3.1	-	I	ko:K01026	ko00620,ko00640,ko00643,ko01100,ko01120,map00620,map00640,map00643,map01100,map01120	ko00000,ko00001,ko01000	Coenzyme A transferase
CGAFBNEO_02551	5.38e-184	-	-	-	K	-	-	-	LysR substrate binding domain
CGAFBNEO_02552	1.47e-70	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CGAFBNEO_02553	1.41e-97	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
CGAFBNEO_02555	1.82e-69	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
CGAFBNEO_02556	2.89e-140	ltrA	-	-	S	-	-	-	Bacterial low temperature requirement A protein (LtrA)
CGAFBNEO_02557	1.07e-153	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
CGAFBNEO_02558	2.32e-313	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
CGAFBNEO_02559	0.0	-	-	-	L	-	-	-	Plasmid pRiA4b ORF-3-like protein
CGAFBNEO_02560	1.52e-182	-	-	-	L	-	-	-	Helicase C-terminal domain protein
CGAFBNEO_02561	4.62e-25	-	-	-	S	-	-	-	Protein of unknown function (DUF669)
CGAFBNEO_02562	0.0	-	-	-	S	ko:K06919	-	ko00000	Phage plasmid primase, P4
CGAFBNEO_02566	3.43e-79	-	-	-	C	-	-	-	2Fe-2S iron-sulfur cluster binding domain
CGAFBNEO_02567	1.24e-188	-	5.2.1.13	-	Q	ko:K09835	ko00906,ko01100,ko01110,map00906,map01100,map01110	ko00000,ko00001,ko00002,ko01000	HI0933-like protein
CGAFBNEO_02568	7.13e-67	-	-	-	K	-	-	-	helix_turn_helix gluconate operon transcriptional repressor
CGAFBNEO_02569	5.71e-230	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
CGAFBNEO_02570	1.39e-143	adh2	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
CGAFBNEO_02577	2.71e-49	-	-	-	S	-	-	-	VRR_NUC
CGAFBNEO_02581	1.71e-72	-	-	-	S	-	-	-	Phage terminase, small subunit
CGAFBNEO_02583	9.6e-263	-	-	-	S	-	-	-	Phage Terminase
CGAFBNEO_02585	4.25e-167	-	-	-	S	-	-	-	Phage portal protein
CGAFBNEO_02586	1.59e-110	-	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S14 family
CGAFBNEO_02587	8.25e-69	-	-	-	S	-	-	-	Phage capsid family
CGAFBNEO_02595	5.6e-140	-	-	-	D	-	-	-	domain protein
CGAFBNEO_02597	1.98e-163	-	-	-	S	-	-	-	Phage minor structural protein
CGAFBNEO_02606	1.32e-49	-	-	-	S	-	-	-	Bacteriophage holin of superfamily 6 (Holin_LLH)
CGAFBNEO_02607	4.64e-127	-	-	-	M	-	-	-	hydrolase, family 25
CGAFBNEO_02609	9.67e-15	-	-	-	-	-	-	-	-
CGAFBNEO_02610	0.0	yfkN	3.1.3.6, 3.1.4.16	-	F	ko:K01119	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
CGAFBNEO_02611	1.25e-38	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
CGAFBNEO_02612	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
CGAFBNEO_02613	5.46e-233	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
CGAFBNEO_02614	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
CGAFBNEO_02615	1.21e-213	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
CGAFBNEO_02616	6.74e-213	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
CGAFBNEO_02617	7.97e-82	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
CGAFBNEO_02618	1.81e-169	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
CGAFBNEO_02619	7.57e-135	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CGAFBNEO_02620	4.65e-168	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
CGAFBNEO_02621	8.49e-146	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
CGAFBNEO_02622	1.13e-41	-	-	-	M	-	-	-	Lysin motif
CGAFBNEO_02623	5.6e-148	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
CGAFBNEO_02624	1.4e-281	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
CGAFBNEO_02625	1.34e-314	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
CGAFBNEO_02626	8.21e-57	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
CGAFBNEO_02627	7.11e-293	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
CGAFBNEO_02628	2e-299	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol