ORF_ID e_value Gene_name EC_number CAZy COGs KEGG_ko KEGG_Pathway BRITE Description
BONDMHDN_00001 1.28e-226 - - - S - - - PFAM Archaeal ATPase
BONDMHDN_00002 3.11e-250 - - - I - - - transferase activity, transferring acyl groups other than amino-acyl groups
BONDMHDN_00003 4.95e-164 citG 2.4.2.52 - H ko:K05966 ko02020,map02020 ko00000,ko00001,ko01000 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
BONDMHDN_00004 9.44e-183 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
BONDMHDN_00005 3.72e-111 yhaH - - S - - - Protein of unknown function (DUF805)
BONDMHDN_00006 3.91e-91 - - - O - - - OsmC-like protein
BONDMHDN_00007 6.74e-267 - - - EGP - - - Major Facilitator Superfamily
BONDMHDN_00008 2.27e-132 sptS - - T - - - Histidine kinase
BONDMHDN_00009 2.05e-146 sptS - - T - - - Histidine kinase
BONDMHDN_00010 1.52e-135 dltr - - K - - - response regulator
BONDMHDN_00011 1.19e-128 - - - T - - - Region found in RelA / SpoT proteins
BONDMHDN_00012 2.9e-48 - - - - - - - -
BONDMHDN_00013 1.24e-08 - - - - - - - -
BONDMHDN_00014 4.83e-136 pncA - - Q - - - Isochorismatase family
BONDMHDN_00015 7.5e-160 - - - - - - - -
BONDMHDN_00018 4.13e-83 - - - - - - - -
BONDMHDN_00019 3.56e-47 - - - - - - - -
BONDMHDN_00020 5.66e-16 - - - L - - - Transposase and inactivated derivatives, IS30 family
BONDMHDN_00021 3.46e-18 - - - L - - - Transposase and inactivated derivatives, IS30 family
BONDMHDN_00022 8.66e-85 - - - L - - - Transposase and inactivated derivatives, IS30 family
BONDMHDN_00023 1.03e-262 - - - G - - - Glycosyl hydrolases family 8
BONDMHDN_00024 3.25e-315 - - - M - - - Glycosyl transferase
BONDMHDN_00026 9.39e-195 - - - - - - - -
BONDMHDN_00027 3.42e-30 - - - S - - - HicA toxin of bacterial toxin-antitoxin,
BONDMHDN_00028 1.23e-313 purB 4.3.2.2 - F ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BONDMHDN_00029 0.0 purA 6.3.4.4 - F ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BONDMHDN_00030 6.69e-239 guaC 1.7.1.7 - F ko:K00364 ko00230,map00230 ko00000,ko00001,ko01000 Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
BONDMHDN_00031 3.94e-252 galM 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the interconversion of alpha and beta anomers of maltose
BONDMHDN_00032 0.0 galT 2.7.7.12 - G ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 ko00000,ko00001,ko00002,ko01000 UDP-glucose--hexose-1-phosphate uridylyltransferase
BONDMHDN_00033 7.19e-281 galK 2.7.1.6 - F ko:K00849 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
BONDMHDN_00034 0.0 glvC 2.7.1.208 - G ko:K02749,ko:K02750 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system, EIIB
BONDMHDN_00035 4.3e-188 - - - S - - - hydrolase
BONDMHDN_00036 3.98e-125 - - - S - - - Phospholipase, patatin family
BONDMHDN_00037 6.31e-84 - - - - - - - -
BONDMHDN_00038 6.84e-70 - - - - - - - -
BONDMHDN_00040 4.4e-165 - - - S - - - PAS domain
BONDMHDN_00041 0.0 nrdE 1.17.4.1 - F ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BONDMHDN_00042 1.82e-97 nrdI - - F ko:K03647 - ko00000 NrdI Flavodoxin like
BONDMHDN_00043 2.11e-249 nrdF 1.17.4.1 - F ko:K00526 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BONDMHDN_00044 8.56e-126 - - - V - - - ABC transporter transmembrane region
BONDMHDN_00045 6.69e-84 - - - L - - - RelB antitoxin
BONDMHDN_00046 1.51e-168 cobQ - - S ko:K07009 - ko00000 glutamine amidotransferase
BONDMHDN_00047 4.26e-108 - - - M - - - NlpC/P60 family
BONDMHDN_00049 1.59e-172 znuB - - U ko:K02075,ko:K09816 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC 3 transport family
BONDMHDN_00050 1.63e-152 adcC - - P ko:K02074,ko:K09817,ko:K11710 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
BONDMHDN_00051 2.43e-209 - - - P ko:K02077 - ko00000,ko00002,ko02000 Belongs to the bacterial solute-binding protein 9 family
BONDMHDN_00052 4.47e-56 - - - K ko:K21903 - ko00000,ko03000 helix_turn_helix, Arsenical Resistance Operon Repressor
BONDMHDN_00053 0.0 fruA 2.7.1.202 - GT ko:K02768,ko:K02769,ko:K02770 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphotransferase System
BONDMHDN_00054 2.18e-215 pfkB 2.7.1.56 - H ko:K00882 ko00051,map00051 ko00000,ko00001,ko01000 Belongs to the carbohydrate kinase PfkB family. LacC subfamily
BONDMHDN_00055 3.14e-175 fruR - - K ko:K03436 - ko00000,ko03000 DeoR C terminal sensor domain
BONDMHDN_00056 6.39e-279 natB - - CP ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
BONDMHDN_00057 3.09e-212 natA - - S ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
BONDMHDN_00058 3.41e-88 - - - - - - - -
BONDMHDN_00059 2.52e-32 - - - - - - - -
BONDMHDN_00060 6.32e-42 - - - K ko:K07727 - ko00000,ko03000 Transcriptional regulator
BONDMHDN_00061 4.74e-107 - - - - - - - -
BONDMHDN_00062 7.87e-30 - - - - - - - -
BONDMHDN_00066 5.02e-180 blpT - - - - - - -
BONDMHDN_00067 4.85e-122 mesE - - M ko:K12293,ko:K20345 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko02000 Transport protein ComB
BONDMHDN_00068 0.0 comA - - V ko:K06147,ko:K06148,ko:K12292,ko:K20344 ko02010,ko02020,ko02024,map02010,map02020,map02024 ko00000,ko00001,ko01000,ko02000 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
BONDMHDN_00069 2.08e-164 - - - K ko:K07707 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko02022 LytTr DNA-binding domain
BONDMHDN_00070 7.34e-178 - 2.7.13.3 - T ko:K07706 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 GHKL domain
BONDMHDN_00071 1.89e-23 - - - - - - - -
BONDMHDN_00072 0.0 - - - S ko:K06921 - ko00000 Archaea bacterial proteins of unknown function
BONDMHDN_00073 0.0 agl 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 31 family
BONDMHDN_00074 0.0 glcD 1.1.3.15 - C ko:K00104 ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130 ko00000,ko00001,ko01000 FAD linked oxidases, C-terminal domain
BONDMHDN_00075 4.48e-34 - - - - - - - -
BONDMHDN_00076 1.07e-35 - - - - - - - -
BONDMHDN_00077 1.95e-45 - - - - - - - -
BONDMHDN_00078 6.94e-70 - - - S - - - Enterocin A Immunity
BONDMHDN_00079 7.79e-186 racD 5.1.1.13 - M ko:K01779 ko00250,ko01054,map00250,map01054 ko00000,ko00001,ko01000 Belongs to the aspartate glutamate racemases family
BONDMHDN_00080 0.0 murE 6.3.2.13, 6.3.2.7 - M ko:K01928,ko:K05362 ko00300,ko00550,ko01100,map00300,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BONDMHDN_00081 9.28e-271 - - - T - - - His Kinase A (phosphoacceptor) domain
BONDMHDN_00082 8.32e-157 vanR - - K - - - response regulator
BONDMHDN_00084 0.0 ndvA - - V ko:K06147 - ko00000,ko02000 ABC transporter
BONDMHDN_00085 1.68e-179 - - - V ko:K06147,ko:K06148 - ko00000,ko02000 ABC transporter, ATP-binding protein
BONDMHDN_00086 1.22e-190 - - - V ko:K06147,ko:K06148 - ko00000,ko02000 ABC transporter, ATP-binding protein
BONDMHDN_00087 3.93e-176 - - - S - - - Protein of unknown function (DUF1129)
BONDMHDN_00088 6.88e-257 ychF - - J ko:K06942 - ko00000,ko03009 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
BONDMHDN_00089 1.1e-59 yyzM - - S - - - Bacterial protein of unknown function (DUF951)
BONDMHDN_00090 4.28e-197 spo0J - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
BONDMHDN_00091 4.99e-178 soj - - D ko:K03496 - ko00000,ko03036,ko04812 Sporulation initiation inhibitor
BONDMHDN_00092 5.86e-191 noc - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
BONDMHDN_00093 3.66e-166 rsmG 2.1.1.170 - J ko:K03501 - ko00000,ko01000,ko03009,ko03036 Specifically methylates the N7 position of a guanine in 16S rRNA
BONDMHDN_00094 2.99e-75 cvpA - - S - - - Colicin V production protein
BONDMHDN_00095 5.24e-230 apbE 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
BONDMHDN_00096 9.48e-194 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
BONDMHDN_00097 2.58e-126 azr 1.5.1.36 - S ko:K22394 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 NADPH-dependent FMN reductase
BONDMHDN_00098 3.41e-125 azo1 1.5.1.36, 1.7.1.6 - S ko:K03206,ko:K19784,ko:K22393 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 NADPH-dependent FMN reductase
BONDMHDN_00099 1.25e-143 - - - K - - - WHG domain
BONDMHDN_00100 2.63e-50 - - - - - - - -
BONDMHDN_00101 2.75e-43 - - - G ko:K03491 - ko00000,ko03000 Mga helix-turn-helix domain
BONDMHDN_00102 0.0 mngB 3.2.1.170 GH38 G ko:K15524 - ko00000,ko01000 Glycosyl hydrolases family 38 N-terminal domain
BONDMHDN_00103 1.48e-84 - - - L - - - Transposase and inactivated derivatives, IS30 family
BONDMHDN_00104 2.32e-313 brnQ - - U ko:K03311 - ko00000 Component of the transport system for branched-chain amino acids
BONDMHDN_00105 0.0 - - - L - - - Plasmid pRiA4b ORF-3-like protein
BONDMHDN_00106 9.48e-204 - - - S - - - EDD domain protein, DegV family
BONDMHDN_00107 2.06e-88 - - - - - - - -
BONDMHDN_00108 0.0 FbpA - - K - - - Fibronectin-binding protein
BONDMHDN_00109 6.15e-36 - - - - - - - -
BONDMHDN_00110 5.31e-149 rsmC 2.1.1.172 - J ko:K00564 - ko00000,ko01000,ko03009 Methyltransferase
BONDMHDN_00111 3.64e-188 - 2.1.1.172 - J ko:K00564,ko:K10716 - ko00000,ko01000,ko02000,ko03009 Ion channel
BONDMHDN_00112 1.61e-72 rplL - - J ko:K02935 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
BONDMHDN_00113 3.72e-111 rplJ - - J ko:K02864 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BONDMHDN_00115 1.41e-87 - - - V - - - HNH endonuclease
BONDMHDN_00117 6.65e-179 puuD - - S ko:K07010 - ko00000,ko01002 peptidase C26
BONDMHDN_00118 6.45e-291 - - - E - - - amino acid
BONDMHDN_00120 3.3e-42 - - - - - - - -
BONDMHDN_00121 3.98e-97 - - - M - - - LysM domain
BONDMHDN_00122 5.22e-05 - - - - - - - -
BONDMHDN_00123 2.75e-96 - 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 UbiA prenyltransferase family
BONDMHDN_00124 3.74e-125 - - - - - - - -
BONDMHDN_00125 4.7e-183 pct 2.8.3.1 - I ko:K01026 ko00620,ko00640,ko00643,ko01100,ko01120,map00620,map00640,map00643,map01100,map01120 ko00000,ko00001,ko01000 Coenzyme A transferase
BONDMHDN_00126 5.89e-192 fabK 1.3.1.9 - S ko:K02371 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Nitronate monooxygenase
BONDMHDN_00127 5.34e-143 crt 4.2.1.17 - I ko:K01715 ko00650,ko01200,map00650,map01200 ko00000,ko00001,ko01000 Enoyl-CoA hydratase/isomerase
BONDMHDN_00128 1.64e-45 - - - - - - - -
BONDMHDN_00129 3.31e-154 - - - K - - - helix_turn_helix, mercury resistance
BONDMHDN_00130 3.82e-294 pbuG - - S ko:K06901 - ko00000,ko02000 permease
BONDMHDN_00132 2.63e-194 int3 - - L - - - Belongs to the 'phage' integrase family
BONDMHDN_00135 3.05e-19 - - - K - - - Helix-turn-helix domain
BONDMHDN_00137 2.78e-32 - - - S - - - Domain of unknown function (DUF771)
BONDMHDN_00140 1.04e-06 - - - K - - - Tetratricopeptide repeat
BONDMHDN_00143 2.49e-67 - - - S - - - Protein of unknown function (DUF1351)
BONDMHDN_00144 8.26e-56 - - - S - - - ERF superfamily
BONDMHDN_00145 1.3e-40 - - - K - - - Helix-turn-helix domain
BONDMHDN_00146 2.6e-21 ansR - - K - - - Transcriptional regulator
BONDMHDN_00148 5.95e-24 radC - - E ko:K03630 - ko00000 Belongs to the UPF0758 family
BONDMHDN_00152 3.9e-53 - - - Q - - - methyltransferase
BONDMHDN_00157 7.58e-90 - - - S - - - ORF6C domain
BONDMHDN_00159 8.55e-49 - - - S - - - VRR_NUC
BONDMHDN_00167 9.77e-27 - - - S - - - N-methyltransferase activity
BONDMHDN_00170 4.27e-234 - - - S - - - Terminase-like family
BONDMHDN_00171 2.32e-110 - - - S ko:K09961 - ko00000 Protein of unknown function (DUF1073)
BONDMHDN_00172 3.33e-70 - - - S - - - Phage Mu protein F like protein
BONDMHDN_00173 2.38e-28 - - - S - - - Lysin motif
BONDMHDN_00174 7.53e-73 - - - S ko:K09960 - ko00000 Uncharacterized protein conserved in bacteria (DUF2213)
BONDMHDN_00175 8.98e-25 - - - - - - - -
BONDMHDN_00177 4.47e-35 - - - S - - - Protein of unknown function (DUF4054)
BONDMHDN_00178 5.56e-22 - - - - - - - -
BONDMHDN_00181 8.17e-168 - - - S - - - Protein of unknown function (DUF3383)
BONDMHDN_00184 1.18e-225 - - - L - - - Phage tail tape measure protein TP901
BONDMHDN_00185 7.64e-54 - - - M - - - LysM domain
BONDMHDN_00186 9.82e-61 - - - - - - - -
BONDMHDN_00187 2.3e-128 - - - - - - - -
BONDMHDN_00188 4.1e-49 - - - - - - - -
BONDMHDN_00189 1.55e-40 - - - - - - - -
BONDMHDN_00190 4.11e-140 - - - S - - - Baseplate J-like protein
BONDMHDN_00192 3.95e-17 - - - S - - - N-acetylmuramoyl-L-alanine amidase activity
BONDMHDN_00195 1.01e-54 - - - - - - - -
BONDMHDN_00196 2.12e-27 - - - S - - - Phage uncharacterised protein (Phage_XkdX)
BONDMHDN_00199 1.22e-24 - - - - - - - -
BONDMHDN_00200 9.28e-41 - - - - - - - -
BONDMHDN_00201 2.48e-226 - - - M - - - Glycosyl hydrolases family 25
BONDMHDN_00202 5.3e-32 - - - - - - - -
BONDMHDN_00203 3.24e-45 - - - T ko:K07171 - ko00000,ko01000,ko02048 PemK-like, MazF-like toxin of type II toxin-antitoxin system
BONDMHDN_00206 1.84e-263 - 4.2.1.126 - S ko:K07106,ko:K09963 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Bacterial protein of unknown function (DUF871)
BONDMHDN_00207 5.12e-242 asnA 6.3.1.1 - F ko:K01914 ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230 ko00000,ko00001,ko01000 aspartate--ammonia ligase
BONDMHDN_00210 4.73e-32 - - - S - - - Domain of unknown function (DUF4417)
BONDMHDN_00211 2.72e-05 - - - M ko:K11021 - ko00000,ko02042 COG3209 Rhs family protein
BONDMHDN_00213 8.25e-16 - - - S - - - Protein conserved in bacteria
BONDMHDN_00214 4.26e-27 - - - E - - - Pfam:DUF955
BONDMHDN_00215 1.91e-233 manA 5.3.1.8 - G ko:K01809 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 mannose-6-phosphate isomerase
BONDMHDN_00217 7.57e-190 - - - S ko:K09704 - ko00000 Metal-independent alpha-mannosidase (GH125)
BONDMHDN_00218 2.16e-193 - 2.3.1.81 - V ko:K00662 - ko00000,ko01000,ko01504 Aminoglycoside 3-N-acetyltransferase
BONDMHDN_00219 6.64e-185 - - - F - - - Phosphorylase superfamily
BONDMHDN_00220 1.05e-176 - - - F - - - Phosphorylase superfamily
BONDMHDN_00221 1.87e-104 comA - - V ko:K06147,ko:K06148,ko:K12292,ko:K20344 ko02010,ko02020,ko02024,map02010,map02020,map02024 ko00000,ko00001,ko01000,ko02000 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
BONDMHDN_00222 7.12e-100 - - - K ko:K07707 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko02022 LytTr DNA-binding domain
BONDMHDN_00223 2.05e-96 - 2.7.13.3 - T ko:K07706 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 GHKL domain
BONDMHDN_00224 8.6e-128 ltrA - - S - - - Bacterial low temperature requirement A protein (LtrA)
BONDMHDN_00225 1.28e-168 - - - L - - - PFAM transposase IS116 IS110 IS902
BONDMHDN_00226 0.0 cas9 - - L ko:K09952 - ko00000,ko01000,ko02048 CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
BONDMHDN_00228 2.07e-38 dmpI 5.3.2.6 - G ko:K01821 ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220 ko00000,ko00001,ko00002,ko01000 Belongs to the 4-oxalocrotonate tautomerase family
BONDMHDN_00229 0.0 - - - S - - - Predicted membrane protein (DUF2207)
BONDMHDN_00230 0.0 lctP - - C ko:K03303 - ko00000,ko02000 L-lactate permease
BONDMHDN_00231 4.52e-29 - - - K - - - Transcriptional regulator
BONDMHDN_00232 0.0 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2325)
BONDMHDN_00233 5.24e-194 - - - S - - - Uncharacterised 5xTM membrane BCR, YitT family COG1284
BONDMHDN_00234 6.82e-66 rplU - - J ko:K02888 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to 23S rRNA in the presence of protein L20
BONDMHDN_00235 3.94e-64 rpmA - - J ko:K02899 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL27 family
BONDMHDN_00236 2.14e-257 pepP 3.4.11.9, 3.4.13.9 - E ko:K01262,ko:K01271 - ko00000,ko01000,ko01002 Creatinase/Prolidase N-terminal domain
BONDMHDN_00237 2.11e-133 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BONDMHDN_00238 7.98e-93 WQ51_04310 - - S ko:K10947 - ko00000,ko03000 Asp23 family, cell envelope-related function
BONDMHDN_00239 2.78e-85 nusB - - K ko:K03625 - ko00000,ko03009,ko03021 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BONDMHDN_00240 7.19e-199 folD 1.5.1.5, 3.5.4.9 - F ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
BONDMHDN_00241 1.97e-248 xseA 3.1.11.6 - L ko:K03601 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
BONDMHDN_00242 1.53e-47 xseB 3.1.11.6 - L ko:K03602 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
BONDMHDN_00243 6.44e-205 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29 - H ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the FPP GGPP synthase family
BONDMHDN_00244 7.22e-197 rrmJ 2.1.1.226, 2.1.1.227 - J ko:K06442 - ko00000,ko01000,ko03009 Ribosomal RNA large subunit methyltransferase J
BONDMHDN_00245 0.0 recN - - L ko:K03631 - ko00000,ko03400 May be involved in recombinational repair of damaged DNA
BONDMHDN_00246 2.19e-100 - - - S - - - ASCH
BONDMHDN_00247 5.97e-145 gmk 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Essential for recycling GMP and indirectly, cGMP
BONDMHDN_00248 2.37e-46 rpoZ 2.7.7.6 - K ko:K03060 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
BONDMHDN_00249 0.0 priA - - L ko:K04066 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BONDMHDN_00250 5.15e-219 fmt 2.1.2.9 - J ko:K00604 ko00670,ko00970,map00670,map00970 ko00000,ko00001,ko01000 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BONDMHDN_00251 1.84e-309 sun 2.1.1.176 - J ko:K03500 - ko00000,ko01000,ko03009 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BONDMHDN_00252 3.28e-179 stp 3.1.3.16 - T ko:K20074 - ko00000,ko01000,ko01009 phosphatase
BONDMHDN_00253 0.0 prkC 2.7.11.1 - KLT ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 serine threonine protein kinase
BONDMHDN_00254 1.71e-208 rsgA 3.1.3.100 - S ko:K06949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
BONDMHDN_00255 7.49e-154 rpe 5.1.3.1 - G ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the ribulose-phosphate 3-epimerase family
BONDMHDN_00256 9.44e-161 thiN 2.7.6.2 - H ko:K00949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 thiamine pyrophosphokinase
BONDMHDN_00257 2.29e-41 - - - - - - - -
BONDMHDN_00258 1.33e-35 rpmB - - J ko:K02902 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL28 family
BONDMHDN_00259 8.29e-75 yloU - - S - - - Asp23 family, cell envelope-related function
BONDMHDN_00260 0.0 yloV - - S ko:K07030 - ko00000 DAK2 domain fusion protein YloV
BONDMHDN_00261 0.0 recG 3.6.4.12 - L ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BONDMHDN_00262 3.69e-233 plsX 2.3.1.15 - I ko:K03621 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
BONDMHDN_00263 4.4e-47 acpP - - IQ ko:K02078 - ko00000,ko00001 Carrier of the growing fatty acid chain in fatty acid biosynthesis
BONDMHDN_00264 5.15e-247 oppD - - P ko:K02031,ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
BONDMHDN_00265 4.31e-231 oppF - - P ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
BONDMHDN_00266 1.49e-225 oppB - - P ko:K02033,ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
BONDMHDN_00267 4.14e-154 oppC5 - - P ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
BONDMHDN_00268 0.0 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
BONDMHDN_00269 2.8e-160 rnc 3.1.26.3 - J ko:K03685 ko03008,ko05205,map03008,map05205 ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
BONDMHDN_00270 0.0 smc - - D ko:K03529 - ko00000,ko03036 Required for chromosome condensation and partitioning
BONDMHDN_00271 1.72e-228 ftsY - - U ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
BONDMHDN_00272 0.0 pepD2 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
BONDMHDN_00273 1.69e-06 - - - - - - - -
BONDMHDN_00274 2.1e-31 - - - - - - - -
BONDMHDN_00275 5.41e-172 cysA - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
BONDMHDN_00276 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
BONDMHDN_00277 1.08e-69 - - - L - - - Transposase and inactivated derivatives
BONDMHDN_00278 5.32e-42 - - - - ko:K18829 - ko00000,ko02048 -
BONDMHDN_00279 1.64e-90 - - - T ko:K07171 - ko00000,ko01000,ko02048 Toxin-antitoxin system, toxin component, MazF family
BONDMHDN_00280 9e-132 - - - L - - - Integrase
BONDMHDN_00281 5.69e-179 msmE - - G ko:K10117 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
BONDMHDN_00282 1.14e-208 - - - K ko:K03484 - ko00000,ko03000 Periplasmic binding protein domain
BONDMHDN_00283 2.14e-48 - - - - - - - -
BONDMHDN_00284 2.18e-51 - - - K - - - Helix-turn-helix domain
BONDMHDN_00285 4.82e-144 - - - K - - - Helix-turn-helix XRE-family like proteins
BONDMHDN_00288 2.61e-30 - - - - - - - -
BONDMHDN_00289 9.82e-80 - - - F - - - NUDIX domain
BONDMHDN_00290 1.83e-103 - - - S - - - AAA domain
BONDMHDN_00291 1.5e-150 - - - S - - - F420-0:Gamma-glutamyl ligase
BONDMHDN_00292 8.99e-59 yxaM - - EGP - - - Major facilitator Superfamily
BONDMHDN_00293 2e-299 cls - - I ko:K06131 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BONDMHDN_00294 1.23e-125 XK27_05225 - - S - - - Tetratricopeptide repeat protein
BONDMHDN_00295 1.28e-311 - - - L ko:K07484 - ko00000 Transposase IS66 family
BONDMHDN_00296 5.51e-46 - - - S - - - Transposase C of IS166 homeodomain
BONDMHDN_00297 4.01e-84 XK27_01125 - - L ko:K07484 - ko00000 PFAM IS66 Orf2 family protein
BONDMHDN_00298 7.23e-50 - - - S ko:K11621 ko02020,map02020 ko00000,ko00001 Putative adhesin
BONDMHDN_00299 1.8e-222 - - - V - - - ABC transporter transmembrane region
BONDMHDN_00300 0.0 celD - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BONDMHDN_00301 2.92e-79 - - - - - - - -
BONDMHDN_00302 1.12e-213 - - - EGP - - - Major Facilitator
BONDMHDN_00303 1.66e-44 - - - K - - - Transcriptional regulator
BONDMHDN_00304 2.31e-77 - - - GK - - - ROK family
BONDMHDN_00305 3.01e-73 - - - - - - - -
BONDMHDN_00306 5.52e-49 - 3.1.21.3 - V ko:K01154 - ko00000,ko01000,ko02048 Type I restriction modification DNA specificity domain
BONDMHDN_00307 2.71e-222 - - - EGP ko:K08368 - ko00000,ko02000 Sugar (and other) transporter
BONDMHDN_00308 6.46e-27 - - - - - - - -
BONDMHDN_00309 1.12e-268 - - - - - - - -
BONDMHDN_00310 6.57e-175 - - - S - - - SLAP domain
BONDMHDN_00311 1.14e-154 - - - S - - - SLAP domain
BONDMHDN_00312 1.06e-133 - - - S - - - Bacteriocin helveticin-J
BONDMHDN_00313 2.35e-58 - - - - - - - -
BONDMHDN_00314 8.29e-76 - - - K - - - Helix-turn-helix XRE-family like proteins
BONDMHDN_00315 1.98e-41 - - - E - - - Zn peptidase
BONDMHDN_00316 0.0 eriC - - P ko:K03281 - ko00000 chloride
BONDMHDN_00317 0.0 gnd 1.1.1.343, 1.1.1.44 - H ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BONDMHDN_00318 5.38e-39 - - - - - - - -
BONDMHDN_00319 0.0 pox1 1.2.3.3 - EH ko:K00158 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000 Belongs to the TPP enzyme family
BONDMHDN_00320 0.0 gidA - - D ko:K03495 - ko00000,ko03016,ko03036 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
BONDMHDN_00321 0.0 mnmE - - S ko:K03650 - ko00000,ko01000,ko03016 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
BONDMHDN_00322 3.37e-192 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
BONDMHDN_00323 2.65e-81 rnpA 3.1.26.5 - J ko:K03536 - ko00000,ko01000,ko03016 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
BONDMHDN_00324 3.26e-23 rpmH - - J ko:K02914 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL34 family
BONDMHDN_00325 6.57e-253 - - - L - - - Transposase and inactivated derivatives, IS30 family
BONDMHDN_00326 9.14e-317 dnaA - - L ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BONDMHDN_00327 8.11e-245 dnaN 2.7.7.7 - L ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
BONDMHDN_00328 1.13e-48 yaaA - - S ko:K14761 - ko00000,ko03009 S4 domain protein YaaA
BONDMHDN_00329 4.22e-267 recF - - L ko:K03629 ko03440,map03440 ko00000,ko00001,ko03400 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BONDMHDN_00330 0.0 gyrB 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BONDMHDN_00331 0.0 gyrA 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BONDMHDN_00332 6.72e-66 rpsF - - J ko:K02990 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Binds together with S18 to 16S ribosomal RNA
BONDMHDN_00333 4.83e-104 ssb - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
BONDMHDN_00334 1.89e-47 rpsR - - J ko:K02963 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BONDMHDN_00335 0.0 yybT - - T - - - signaling protein consisting of a modified GGDEF domain and a DHH domain
BONDMHDN_00336 3.87e-97 rplI - - J ko:K02939 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
BONDMHDN_00337 0.0 dnaB 3.6.4.12 - L ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Participates in initiation and elongation during chromosome replication
BONDMHDN_00338 5.56e-217 phnD - - P ko:K02044 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, phosphonate, periplasmic substrate-binding protein
BONDMHDN_00339 2.26e-215 degV1 - - S - - - DegV family
BONDMHDN_00340 1.23e-170 - - - V - - - ABC transporter transmembrane region
BONDMHDN_00341 4.76e-213 scrK 2.7.1.4 - GK ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 ko00000,ko00001,ko01000 ROK family
BONDMHDN_00342 3.81e-18 - - - S - - - CsbD-like
BONDMHDN_00343 2.26e-31 - - - S - - - Transglycosylase associated protein
BONDMHDN_00344 1.37e-287 - - - I - - - Protein of unknown function (DUF2974)
BONDMHDN_00345 3.92e-153 - - - S ko:K07507 - ko00000,ko02000 MgtC family
BONDMHDN_00347 6.48e-167 - - - K - - - Helix-turn-helix XRE-family like proteins
BONDMHDN_00348 4.95e-98 - - - - - - - -
BONDMHDN_00349 6.59e-115 - - - - - - - -
BONDMHDN_00350 5.01e-55 ybhL - - S ko:K06890 - ko00000 Belongs to the BI1 family
BONDMHDN_00351 4.39e-268 - - - S ko:K09963 - ko00000 Bacterial protein of unknown function (DUF871)
BONDMHDN_00353 1.28e-162 sagD - - S - - - YcaO cyclodehydratase, ATP-ad Mg2+-binding
BONDMHDN_00354 8.08e-108 - - - S - - - PFAM Archaeal ATPase
BONDMHDN_00355 1.32e-105 - - - S - - - PFAM Archaeal ATPase
BONDMHDN_00356 7.02e-36 - - - - - - - -
BONDMHDN_00357 2.78e-70 - 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 UbiA prenyltransferase family
BONDMHDN_00358 3.61e-60 - - - - - - - -
BONDMHDN_00359 4.53e-76 - - - T ko:K07171 - ko00000,ko01000,ko02048 PemK-like, MazF-like toxin of type II toxin-antitoxin system
BONDMHDN_00361 2.18e-34 - - - S - - - PFAM Archaeal ATPase
BONDMHDN_00362 7.14e-91 - - - EGP - - - Major Facilitator
BONDMHDN_00363 2.58e-45 - - - - - - - -
BONDMHDN_00364 9.13e-157 - - - L - - - PFAM transposase IS116 IS110 IS902
BONDMHDN_00365 2.99e-114 tpx 1.11.1.15 - O ko:K11065 - ko00000,ko01000 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
BONDMHDN_00367 1.27e-42 - - - K - - - Bacterial regulatory helix-turn-helix protein, lysR family
BONDMHDN_00368 5.51e-35 - - - - - - - -
BONDMHDN_00369 8.71e-31 - - - G - - - Ribose/Galactose Isomerase
BONDMHDN_00370 6.13e-70 - - - K - - - sequence-specific DNA binding
BONDMHDN_00371 5.97e-55 - - - S - - - SnoaL-like domain
BONDMHDN_00372 0.0 - - - L - - - PLD-like domain
BONDMHDN_00373 6.83e-133 yrgI 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Histidine phosphatase superfamily (branch 1)
BONDMHDN_00374 0.0 lysC 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the aspartokinase family
BONDMHDN_00375 0.0 thrC 4.2.3.1 - E ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Threonine synthase
BONDMHDN_00376 2.95e-283 hom 1.1.1.3 - E ko:K00003 ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 homoserine dehydrogenase
BONDMHDN_00377 3.06e-202 thrB 2.7.1.39 - F ko:K00872 ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
BONDMHDN_00378 3.06e-140 - - - - - - - -
BONDMHDN_00379 2.83e-205 yitT - - S - - - Uncharacterised 5xTM membrane BCR, YitT family COG1284
BONDMHDN_00381 4.88e-12 msrA 1.8.4.11, 1.8.4.12 - O ko:K07304,ko:K12267 - ko00000,ko01000 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BONDMHDN_00382 6.69e-155 - - - L - - - Belongs to the 'phage' integrase family
BONDMHDN_00384 1.64e-73 - - - V - - - Abi-like protein
BONDMHDN_00385 8.17e-84 - - - K - - - Peptidase S24-like
BONDMHDN_00392 2.38e-28 - - - L - - - Psort location Cytoplasmic, score
BONDMHDN_00396 1.75e-104 - - - L - - - Belongs to the 'phage' integrase family
BONDMHDN_00397 2.73e-103 - - - V - - - site-specific DNA-methyltransferase (adenine-specific) activity
BONDMHDN_00400 1.85e-12 - - - - - - - -
BONDMHDN_00401 3.93e-20 - - - S - - - HNH endonuclease
BONDMHDN_00410 3.49e-48 - - - L - - - HNH endonuclease
BONDMHDN_00412 0.000922 - - - S - - - Phage terminase, small subunit
BONDMHDN_00413 2.77e-220 terL - - S - - - overlaps another CDS with the same product name
BONDMHDN_00415 5.61e-125 - - - S - - - Phage portal protein
BONDMHDN_00416 2.3e-70 - - - OU - - - Belongs to the peptidase S14 family
BONDMHDN_00417 5.72e-108 - - - S - - - Phage capsid family
BONDMHDN_00420 9.66e-39 - - - S - - - Bacteriophage HK97-gp10, putative tail-component
BONDMHDN_00425 1.9e-185 - - - D - - - domain protein
BONDMHDN_00426 3.24e-290 - - - L - - - COG3547 Transposase and inactivated derivatives
BONDMHDN_00427 1.44e-07 - - - S - - - YSIRK type signal peptide
BONDMHDN_00429 3.52e-296 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2325)
BONDMHDN_00430 7.55e-53 - - - S - - - Transglycosylase associated protein
BONDMHDN_00431 7.7e-126 - - - L - - - Helix-turn-helix domain
BONDMHDN_00433 1.22e-98 - - - S - - - ECF transporter, substrate-specific component
BONDMHDN_00434 1.7e-69 coaD 2.7.7.3 - H ko:K00954 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BONDMHDN_00435 2.15e-127 - - - L - - - Helix-turn-helix domain
BONDMHDN_00436 1.31e-231 - - - S ko:K07133 - ko00000 cog cog1373
BONDMHDN_00437 2.91e-217 mprF - - S ko:K07027 - ko00000,ko02000 Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
BONDMHDN_00438 9.03e-257 cpoA 2.4.1.208 GT4 M ko:K13677,ko:K13678 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000,ko01003 Glycosyltransferase, group 1 family protein
BONDMHDN_00439 1.72e-286 - 2.4.1.337 GT4 M ko:K19002 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000,ko01003 Glycosyl transferase 4-like domain
BONDMHDN_00451 1.14e-28 - - - - - - - -
BONDMHDN_00457 6.01e-66 - - - - - - - -
BONDMHDN_00461 1.51e-76 - - - - - - - -
BONDMHDN_00462 6.65e-45 - - - - - - - -
BONDMHDN_00464 2.46e-207 - - - S - - - Baseplate J-like protein
BONDMHDN_00466 1.61e-58 - - - - - - - -
BONDMHDN_00467 1.43e-143 - - - - - - - -
BONDMHDN_00468 9.3e-57 - - - - - - - -
BONDMHDN_00469 4.47e-105 - - - M - - - LysM domain
BONDMHDN_00470 6.98e-273 - - - L - - - Phage tail tape measure protein TP901
BONDMHDN_00474 4.04e-147 - - - S - - - Protein of unknown function (DUF3383)
BONDMHDN_00477 9.75e-36 - - - - - - - -
BONDMHDN_00480 8.2e-45 - - - - - - - -
BONDMHDN_00481 2.04e-78 - - - S ko:K09960 - ko00000 Uncharacterized protein conserved in bacteria (DUF2213)
BONDMHDN_00482 4.13e-28 - - - S - - - Lysin motif
BONDMHDN_00483 4.88e-85 - - - S - - - Phage Mu protein F like protein
BONDMHDN_00484 4.55e-138 - - - S ko:K09961 - ko00000 Protein of unknown function (DUF1073)
BONDMHDN_00485 1.36e-248 - - - S - - - Terminase-like family
BONDMHDN_00486 2.92e-26 - - - L ko:K07474 - ko00000 Terminase small subunit
BONDMHDN_00488 1.75e-20 bcgIA 2.1.1.72 - V ko:K03427 - ko00000,ko01000,ko02048 site-specific DNA-methyltransferase (adenine-specific) activity
BONDMHDN_00489 1.97e-88 - 2.1.1.72 - V ko:K03427 - ko00000,ko01000,ko02048 site-specific DNA-methyltransferase (adenine-specific) activity
BONDMHDN_00494 4.36e-272 XK27_11280 - - S - - - Psort location CytoplasmicMembrane, score
BONDMHDN_00496 6.94e-54 - - - S - - - VRR_NUC
BONDMHDN_00498 3.74e-180 - - - L - - - Transposase DDE domain
BONDMHDN_00499 2.37e-190 - - - U ko:K05340 - ko00000,ko02000 sugar transport
BONDMHDN_00500 6.59e-160 - - - S - - - Protein of unknown function (DUF1275)
BONDMHDN_00501 3.01e-210 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
BONDMHDN_00502 3.85e-180 pnuC - - H ko:K03811 - ko00000,ko02000 nicotinamide mononucleotide transporter
BONDMHDN_00503 1.55e-09 - - - S - - - Protein of unknown function (DUF3290)
BONDMHDN_00504 1.29e-115 - - - EGP - - - Major Facilitator
BONDMHDN_00505 1.26e-62 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
BONDMHDN_00506 5.98e-119 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
BONDMHDN_00507 5.28e-215 - - - GKT ko:K03491 - ko00000,ko03000 Mga helix-turn-helix domain
BONDMHDN_00508 3.53e-63 hxlB 5.3.1.27 - M ko:K08094 ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230 ko00000,ko00001,ko00002,ko01000 SIS domain
BONDMHDN_00509 1.55e-82 - - - M - - - SIS domain
BONDMHDN_00510 8.46e-98 - - - S - - - Uncharacterised protein family UPF0047
BONDMHDN_00511 1.88e-44 - 2.7.1.200 - G ko:K02774 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
BONDMHDN_00512 3.94e-254 - - - G ko:K02775 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system sugar-specific permease component
BONDMHDN_00513 3.05e-53 - 2.7.1.200 - GT ko:K02773 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BONDMHDN_00514 2.39e-85 rpe 5.1.3.1 - G ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the ribulose-phosphate 3-epimerase family
BONDMHDN_00515 2.76e-188 - - - S ko:K03328 - ko00000 Membrane protein involved in the export of O-antigen and teichoic acid
BONDMHDN_00516 1.92e-90 - - - M - - - Glycosyltransferase like family 2
BONDMHDN_00518 2.94e-94 - - - S - - - Bacterial transferase hexapeptide (six repeats)
BONDMHDN_00519 5.18e-109 - - - M - - - Glycosyltransferase like family 2
BONDMHDN_00520 2.56e-66 - - - M - - - Domain of unknown function (DUF1919)
BONDMHDN_00521 2.38e-130 - - GT4 M ko:K19424 - ko00000,ko01000,ko01003 Glycosyl transferases group 1
BONDMHDN_00522 2.82e-97 - - - S - - - Glycosyltransferase family 28 C-terminal domain
BONDMHDN_00523 1.53e-102 - - - M - - - Oligosaccharide biosynthesis protein Alg14 like
BONDMHDN_00524 5.25e-137 - - - M - - - Glycosyltransferase
BONDMHDN_00525 6.23e-40 - - - M - - - Glycosyltransferase
BONDMHDN_00526 6.65e-155 epsE2 - - M - - - Bacterial sugar transferase
BONDMHDN_00527 6.64e-186 ywqE 3.1.3.48 - GM ko:K01104 - ko00000,ko01000 PHP domain protein
BONDMHDN_00528 2.78e-160 ywqD - - D - - - Capsular exopolysaccharide family
BONDMHDN_00529 4.34e-184 epsB - - M - - - biosynthesis protein
BONDMHDN_00530 1.47e-243 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
BONDMHDN_00534 1.3e-282 hflX - - S ko:K03665 - ko00000,ko03009 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BONDMHDN_00535 1.26e-223 - - - S - - - Cysteine-rich secretory protein family
BONDMHDN_00536 3.01e-54 - - - - - - - -
BONDMHDN_00537 1.73e-167 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC/P60 family
BONDMHDN_00538 1.28e-174 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC P60 family protein
BONDMHDN_00539 4.39e-116 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC/P60 family
BONDMHDN_00540 2.11e-115 gmk2 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Guanylate kinase homologues.
BONDMHDN_00541 4.52e-56 - - - - - - - -
BONDMHDN_00542 0.0 - - - S - - - O-antigen ligase like membrane protein
BONDMHDN_00543 8.77e-144 - - - - - - - -
BONDMHDN_00544 6.96e-286 tnpB - - L ko:K07496 - ko00000 Putative transposase DNA-binding domain
BONDMHDN_00545 4.75e-101 nrdI - - F ko:K03647 - ko00000 NrdI Flavodoxin like
BONDMHDN_00546 3.4e-227 nrdF 1.17.4.1 - F ko:K00526 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BONDMHDN_00547 1.16e-101 - - - - - - - -
BONDMHDN_00548 2.72e-144 - - - S - - - Peptidase_C39 like family
BONDMHDN_00549 7.36e-109 - - - S - - - Threonine/Serine exporter, ThrE
BONDMHDN_00550 7.35e-174 - - - S - - - Putative threonine/serine exporter
BONDMHDN_00551 0.0 - - - S - - - ABC transporter
BONDMHDN_00552 1.64e-81 - - - - - - - -
BONDMHDN_00553 1.1e-125 rimL - - J ko:K03817 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
BONDMHDN_00554 2.8e-160 - - - S ko:K07150 - ko00000 Protein of unknown function (DUF554)
BONDMHDN_00555 7.9e-272 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
BONDMHDN_00556 4.3e-175 - - - S - - - Alpha/beta hydrolase family
BONDMHDN_00557 8.77e-102 comA - - V ko:K06147,ko:K06148,ko:K12292,ko:K20344 ko02010,ko02020,ko02024,map02010,map02020,map02024 ko00000,ko00001,ko01000,ko02000 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
BONDMHDN_00559 1.07e-153 yjhB 3.6.1.13 - F ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 NUDIX domain
BONDMHDN_00561 2.84e-108 - - - K - - - FR47-like protein
BONDMHDN_00562 1e-22 - - - S - - - Domain of Unknown Function with PDB structure (DUF3850)
BONDMHDN_00564 1.72e-127 - - - M - - - Protein of unknown function (DUF3737)
BONDMHDN_00565 1.72e-288 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I
BONDMHDN_00566 1.93e-242 manA 5.3.1.8 - G ko:K01809 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 mannose-6-phosphate isomerase
BONDMHDN_00567 9.01e-90 - - - S - - - SdpI/YhfL protein family
BONDMHDN_00568 4.96e-167 - - - K - - - Transcriptional regulatory protein, C terminal
BONDMHDN_00569 0.0 yclK - - T - - - Histidine kinase
BONDMHDN_00570 0.0 ltaS 2.7.8.20 - M ko:K19005 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
BONDMHDN_00571 5.3e-137 vanZ - - V - - - VanZ like family
BONDMHDN_00572 0.0 pgi 5.3.1.9 - G ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GPI family
BONDMHDN_00573 3.26e-274 - - - EGP - - - Major Facilitator
BONDMHDN_00574 7.95e-250 ampC - - V - - - Beta-lactamase
BONDMHDN_00577 0.0 murE2 6.3.2.13 - M ko:K01928 ko00300,ko00550,map00300,map00550 ko00000,ko00001,ko01000,ko01011 Domain of unknown function (DUF1727)
BONDMHDN_00578 7.02e-146 tdk 2.7.1.21 - F ko:K00857 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 thymidine kinase
BONDMHDN_00579 6.6e-237 prfA - - J ko:K02835 - ko00000,ko03012 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BONDMHDN_00580 1.24e-198 prmC 2.1.1.297 - J ko:K02493 - ko00000,ko01000,ko03012 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
BONDMHDN_00581 1.66e-243 ywlC 2.7.7.87 - J ko:K07566 - ko00000,ko01000,ko03009,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
BONDMHDN_00582 5.28e-146 upp 2.4.2.9 - F ko:K00761 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BONDMHDN_00583 5.87e-166 atpB - - C ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko03110 it plays a direct role in the translocation of protons across the membrane
BONDMHDN_00584 4.83e-37 atpE - - C ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BONDMHDN_00585 2.48e-83 atpF - - C ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
BONDMHDN_00586 6.55e-120 atpH - - C ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BONDMHDN_00587 0.0 atpA 3.6.3.14 - C ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
BONDMHDN_00588 1.48e-221 atpG - - C ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BONDMHDN_00589 0.0 atpD 3.6.3.14 - C ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BONDMHDN_00590 2.45e-93 atpC - - C ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane
BONDMHDN_00591 2.54e-42 - - - S - - - Protein of unknown function (DUF1146)
BONDMHDN_00592 4.81e-227 mbl - - D ko:K03569 - ko00000,ko02048,ko03036,ko04812 Cell shape determining protein MreB Mrl
BONDMHDN_00593 1.59e-68 ytjA - - S ko:K08998 - ko00000 Could be involved in insertion of integral membrane proteins into the membrane
BONDMHDN_00594 5.13e-46 - - - S - - - Protein of unknown function (DUF2969)
BONDMHDN_00595 1.18e-275 rodA - - D ko:K05837 - ko00000,ko03036 Belongs to the SEDS family
BONDMHDN_00596 9.45e-104 uspA - - T - - - universal stress protein
BONDMHDN_00597 1.35e-56 - - - - - - - -
BONDMHDN_00598 1.47e-302 rarA - - L ko:K07478 - ko00000 recombination factor protein RarA
BONDMHDN_00599 8.08e-110 - - - S - - - Protein of unknown function (DUF1694)
BONDMHDN_00600 3.07e-142 rpsD - - J ko:K02986 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
BONDMHDN_00601 0.0 ezrA - - D ko:K06286 - ko00000,ko03036 modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
BONDMHDN_00602 3.52e-272 iscS2 2.8.1.7 - E ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Aminotransferase class V
BONDMHDN_00603 2.86e-287 thiI 2.8.1.4 - H ko:K03151 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BONDMHDN_00604 3.1e-92 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
BONDMHDN_00605 3.24e-112 yxaM - - EGP - - - Major facilitator Superfamily
BONDMHDN_00606 6.13e-110 - - - K - - - Acetyltransferase (GNAT) domain
BONDMHDN_00608 1.35e-191 - - - P ko:K02077 - ko00000,ko00002,ko02000 Belongs to the bacterial solute-binding protein 9 family
BONDMHDN_00611 1.72e-285 metK 2.5.1.6 - H ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BONDMHDN_00612 5.03e-313 mdr - - EGP - - - Major Facilitator
BONDMHDN_00613 0.0 pts32BC 2.7.1.211 - G ko:K02808,ko:K02809,ko:K02810 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
BONDMHDN_00614 1.54e-194 murQ 4.2.1.126 - G ko:K07106 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
BONDMHDN_00615 7.56e-225 ybbE 3.4.16.4 - V ko:K21469 ko00550,map00550 ko00000,ko00001,ko01000,ko01002,ko01011 Beta-lactamase
BONDMHDN_00616 5.06e-237 - - - S ko:K09963 - ko00000 Bacterial protein of unknown function (DUF871)
BONDMHDN_00617 3.22e-185 - - - K - - - rpiR family
BONDMHDN_00618 0.0 cydA 1.10.3.14 - C ko:K00425 ko00190,ko01100,ko02020,map00190,map01100,map02020 ko00000,ko00001,ko00002,ko01000 ubiquinol oxidase
BONDMHDN_00619 4.87e-236 cydB 1.10.3.14 - C ko:K00426 ko00190,ko01100,ko02020,map00190,map01100,map02020 ko00000,ko00001,ko00002,ko01000 Cytochrome d ubiquinol oxidase subunit II
BONDMHDN_00620 0.0 cydC - - CO ko:K16013 ko02010,map02010 ko00000,ko00001,ko02000 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
BONDMHDN_00621 0.0 cydD - - CO ko:K16012 ko02010,map02010 ko00000,ko00001,ko02000 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BONDMHDN_00622 1.76e-165 menG 2.1.1.163, 2.1.1.201 - H ko:K03183 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
BONDMHDN_00623 7.38e-168 hepT 2.5.1.30 - H ko:K00805 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Belongs to the FPP GGPP synthase family
BONDMHDN_00624 4e-204 menA 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 1,4-dihydroxy-2-naphthoate
BONDMHDN_00625 1.74e-293 yumB 1.6.99.3 - C ko:K03885 ko00190,map00190 ko00000,ko00001,ko01000 NADH dehydrogenase
BONDMHDN_00626 3.16e-52 - 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
BONDMHDN_00627 2.82e-110 - - - S - - - PD-(D/E)XK nuclease family transposase
BONDMHDN_00628 6.75e-216 - - - K - - - LysR substrate binding domain
BONDMHDN_00629 1.39e-156 yodM 3.6.1.27 - I ko:K19302 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Acid phosphatase homologues
BONDMHDN_00630 0.0 leuS 6.1.1.4 - J ko:K01869 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Belongs to the class-I aminoacyl-tRNA synthetase family
BONDMHDN_00631 0.0 ytgP - - S ko:K03328 - ko00000 Polysaccharide biosynthesis protein
BONDMHDN_00632 2.52e-151 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
BONDMHDN_00633 2.96e-42 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
BONDMHDN_00634 4.84e-42 - - - - - - - -
BONDMHDN_00635 9.14e-187 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 Phosphate
BONDMHDN_00636 8.73e-205 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
BONDMHDN_00637 8.63e-195 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphate transport system permease protein PstA
BONDMHDN_00638 4.66e-179 pstB 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
BONDMHDN_00639 8.62e-138 - - - P ko:K02039 - ko00000 Plays a role in the regulation of phosphate uptake
BONDMHDN_00640 1.56e-155 phoB - - T ko:K07658 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Transcriptional regulatory protein, C terminal
BONDMHDN_00641 0.0 phoR 2.7.13.3 - T ko:K07636 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
BONDMHDN_00642 8.89e-57 sagB - - C - - - Nitroreductase family
BONDMHDN_00643 9.23e-106 - - - L - - - PFAM Transposase DDE domain
BONDMHDN_00644 2.09e-110 - - - - - - - -
BONDMHDN_00645 9.91e-150 - 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Ham1 family
BONDMHDN_00646 9.67e-104 - - - - - - - -
BONDMHDN_00647 6.74e-309 cpdA - - S - - - Calcineurin-like phosphoesterase
BONDMHDN_00648 6.85e-277 ypsC - - L ko:K07444 - ko00000,ko01000 Belongs to the methyltransferase superfamily
BONDMHDN_00649 1.85e-90 gpsB - - D - - - Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
BONDMHDN_00650 1.18e-139 ypsA - - S - - - Belongs to the UPF0398 family
BONDMHDN_00651 8.47e-152 recU - - L ko:K03700 - ko00000,ko03400 Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
BONDMHDN_00652 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M ko:K05366 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 penicillin-binding protein 1A
BONDMHDN_00653 1.92e-148 nth 4.2.99.18 - L ko:K10773 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BONDMHDN_00654 6.91e-149 dnaD - - L ko:K02086 - ko00000 DnaD domain protein
BONDMHDN_00655 0.0 asnS 6.1.1.22 - J ko:K01893 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Asparaginyl-tRNA synthetase
BONDMHDN_00656 9.62e-116 ypmB - - S - - - Protein conserved in bacteria
BONDMHDN_00657 0.0 dinG 3.6.4.12 - L ko:K03722 - ko00000,ko01000,ko03400 helicase involved in DNA repair and perhaps also replication
BONDMHDN_00658 0.0 addA 3.6.4.12 - L ko:K16898 - ko00000,ko01000,ko03400 ATP-dependent helicase nuclease subunit A
BONDMHDN_00659 0.0 rexB 3.6.4.12 - L ko:K16899 - ko00000,ko01000,ko03400 The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
BONDMHDN_00660 2.12e-173 mvk 2.7.1.36 - I ko:K00869 ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146 ko00000,ko00001,ko00002,ko01000 GHMP kinases N terminal domain
BONDMHDN_00661 5.87e-228 mvaD 4.1.1.33 - I ko:K01597 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 diphosphomevalonate decarboxylase
BONDMHDN_00662 6.67e-261 mvaK2 2.7.4.2 - I ko:K00938 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 phosphomevalonate kinase
BONDMHDN_00663 4.87e-236 fni 5.3.3.2 - C ko:K01823 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
BONDMHDN_00664 1.28e-150 - 3.1.3.102, 3.1.3.104, 3.1.3.23 - G ko:K07757,ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Sucrose-6F-phosphate phosphohydrolase
BONDMHDN_00665 0.0 rsmF - - J - - - NOL1 NOP2 sun family protein
BONDMHDN_00666 4.4e-215 - - - - - - - -
BONDMHDN_00667 4.68e-183 - - - - - - - -
BONDMHDN_00668 1.27e-133 lepB 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
BONDMHDN_00669 3.49e-36 - - - - - - - -
BONDMHDN_00670 3.85e-193 - - - - - - - -
BONDMHDN_00671 2.54e-176 - - - - - - - -
BONDMHDN_00672 1.65e-180 - - - - - - - -
BONDMHDN_00673 1.33e-161 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
BONDMHDN_00674 1.25e-80 lexA - - K ko:K07979 - ko00000,ko03000 Transcriptional regulator, GntR family
BONDMHDN_00675 4.97e-122 pepT 3.4.11.4 - E ko:K01258 - ko00000,ko01000,ko01002 Cleaves the N-terminal amino acid of tripeptides
BONDMHDN_00676 3.02e-151 pepT 3.4.11.4 - E ko:K01258 - ko00000,ko01000,ko01002 Cleaves the N-terminal amino acid of tripeptides
BONDMHDN_00677 8.12e-196 yqfO - - S - - - Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BONDMHDN_00678 2.8e-159 trmK 2.1.1.217 - S ko:K06967 - ko00000,ko01000,ko03016 SAM-dependent methyltransferase
BONDMHDN_00679 5.37e-106 - 3.6.1.55 - F ko:K03574 - ko00000,ko01000,ko03400 NUDIX domain
BONDMHDN_00680 4.34e-166 - - - S - - - Peptidase family M23
BONDMHDN_00681 1.38e-162 B4168_4126 - - L ko:K07493 - ko00000 Transposase
BONDMHDN_00682 2.82e-17 - - - L ko:K07473 - ko00000,ko02048 RelB antitoxin
BONDMHDN_00683 2.73e-21 - - - L ko:K07473 - ko00000,ko02048 RelB antitoxin
BONDMHDN_00684 6.8e-48 - - - S ko:K19157 - ko00000,ko01000,ko02048 Bacterial toxin of type II toxin-antitoxin system, YafQ
BONDMHDN_00685 4.82e-102 - - - V - - - Type I restriction modification DNA specificity domain
BONDMHDN_00686 5.44e-299 - - - V - - - N-6 DNA Methylase
BONDMHDN_00687 9.56e-129 - - - L - - - An automated process has identified a potential problem with this gene model
BONDMHDN_00688 1.71e-156 araD 5.1.3.4 - G ko:K03077 ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120 ko00000,ko00001,ko00002,ko01000 links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
BONDMHDN_00689 7.98e-35 - - - GKT - - - Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BONDMHDN_00690 4.68e-25 - 2.7.1.200 - G ko:K02774 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
BONDMHDN_00691 8.24e-257 - - - G ko:K02775 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system sugar-specific permease component
BONDMHDN_00692 7.62e-32 - 2.7.1.200 - G ko:K02773 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BONDMHDN_00694 1.78e-21 - - - L - - - An automated process has identified a potential problem with this gene model
BONDMHDN_00695 5.85e-67 - - - L - - - An automated process has identified a potential problem with this gene model
BONDMHDN_00697 1.54e-87 doc - - S ko:K07341 - ko00000,ko02048 Fic/DOC family
BONDMHDN_00698 2.78e-45 - - - - - - - -
BONDMHDN_00699 1.51e-27 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
BONDMHDN_00701 2.72e-158 - - - L - - - This gene contains a nucleotide ambiguity which may be the result of a sequencing error
BONDMHDN_00703 1.33e-22 - - - S - - - PemK-like, MazF-like toxin of type II toxin-antitoxin system
BONDMHDN_00704 1.69e-31 - - - L ko:K07473 - ko00000,ko02048 Addiction module antitoxin, RelB DinJ family
BONDMHDN_00705 4.16e-55 - - - E - - - Pfam:DUF955
BONDMHDN_00707 2.63e-24 - - - L - - - Psort location Cytoplasmic, score
BONDMHDN_00708 1.72e-33 - - - L - - - four-way junction helicase activity
BONDMHDN_00717 2.23e-24 lysM - - M - - - LysM domain
BONDMHDN_00718 3.25e-194 - - - S - - - COG0433 Predicted ATPase
BONDMHDN_00722 1.14e-163 - - - U ko:K03205 ko03070,map03070 ko00000,ko00001,ko00002,ko02044 TraM recognition site of TraD and TraG
BONDMHDN_00727 3.76e-13 - - - S - - - SLAP domain
BONDMHDN_00728 6.55e-05 - - - M - - - Conserved repeat domain
BONDMHDN_00729 2.46e-10 - - - M - - - oxidoreductase activity
BONDMHDN_00731 3.61e-20 srtA 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
BONDMHDN_00732 2.48e-15 - - - S - - - SLAP domain
BONDMHDN_00736 2.59e-10 ssb - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
BONDMHDN_00744 2.38e-32 - - - S - - - Domain of unknown function (DUF771)
BONDMHDN_00745 9.39e-39 - - - K - - - Helix-turn-helix domain
BONDMHDN_00746 5.58e-33 - - - K - - - Helix-turn-helix XRE-family like proteins
BONDMHDN_00747 3.74e-20 - - - K - - - Cro/C1-type HTH DNA-binding domain
BONDMHDN_00749 2.63e-194 int3 - - L - - - Belongs to the 'phage' integrase family
BONDMHDN_00752 1.07e-281 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BONDMHDN_00753 4.37e-241 ytxK 2.1.1.72 - L ko:K00571 - ko00000,ko01000,ko02048 N-6 DNA Methylase
BONDMHDN_00754 3.69e-30 - - - - - - - -
BONDMHDN_00755 1.31e-98 - - - U ko:K02248 - ko00000,ko00002,ko02044 Putative Competence protein ComGF
BONDMHDN_00756 1.96e-54 - - - - - - - -
BONDMHDN_00757 8.52e-93 - - - - ko:K02246 - ko00000,ko00002,ko02044 -
BONDMHDN_00758 7.88e-63 comGC - - U ko:K02245 - ko00000,ko00002,ko02044 competence protein ComGC
BONDMHDN_00759 5.15e-224 comGB - - NU ko:K02244 - ko00000,ko00002,ko02044 type II secretion system
BONDMHDN_00760 5.04e-231 comGA - - NU ko:K02243 - ko00000,ko00002,ko02044 Type II IV secretion system protein
BONDMHDN_00761 5.65e-171 yebC - - K - - - Transcriptional regulatory protein
BONDMHDN_00762 3.31e-120 - - - S - - - VanZ like family
BONDMHDN_00763 7.83e-140 ylbE - - GM - - - NAD(P)H-binding
BONDMHDN_00764 4.8e-38 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BONDMHDN_00766 0.0 - - - E - - - Amino acid permease
BONDMHDN_00767 5.92e-235 ybcH - - D ko:K06889 - ko00000 Alpha beta
BONDMHDN_00768 0.0 - 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
BONDMHDN_00769 0.0 pts33BCA - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
BONDMHDN_00770 8.39e-195 bglG5 - - K ko:K03488 - ko00000,ko03000 CAT RNA binding domain
BONDMHDN_00771 1.25e-262 glxK 2.7.1.165 - G ko:K00865 ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130 ko00000,ko00001,ko01000 Belongs to the glycerate kinase type-1 family
BONDMHDN_00772 3.07e-112 ptpA 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BONDMHDN_00773 2.85e-153 - - - - - - - -
BONDMHDN_00774 3.23e-98 copY - - K ko:K02171 ko01501,map01501 ko00000,ko00001,ko00002,ko01504,ko03000 Penicillinase repressor
BONDMHDN_00775 8.04e-190 - - - S - - - hydrolase
BONDMHDN_00776 0.0 glmM 5.4.2.10 - G ko:K03431 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko01000 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BONDMHDN_00777 2.76e-221 ybbR - - S - - - YbbR-like protein
BONDMHDN_00778 2.13e-194 dacA 2.7.7.85 - S ko:K18672 - ko00000,ko01000 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
BONDMHDN_00779 3.46e-266 potD - - P ko:K11069 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
BONDMHDN_00780 3.69e-170 potC - - P ko:K11070 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
BONDMHDN_00781 8.77e-173 potB - - P ko:K11071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
BONDMHDN_00782 1.25e-263 potA 3.6.3.30, 3.6.3.31 - P ko:K02010,ko:K11072 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
BONDMHDN_00783 2.84e-208 murB 1.3.1.98 - M ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation
BONDMHDN_00784 1.51e-127 dnaQ 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
BONDMHDN_00785 4.82e-113 ydiB - - O ko:K06925 - ko00000,ko03016 Hydrolase, P-loop family
BONDMHDN_00786 1.1e-232 pta 2.3.1.8, 3.6.3.21 - C ko:K00625,ko:K02028 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000,ko02000 phosphate acetyltransferase
BONDMHDN_00787 1.64e-174 ung 3.2.2.27 - L ko:K03648 ko03410,ko05340,map03410,map05340 ko00000,ko00001,ko01000,ko03400 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
BONDMHDN_00788 2.81e-200 ycsE - - S - - - Sucrose-6F-phosphate phosphohydrolase
BONDMHDN_00789 3.07e-124 - - - - - - - -
BONDMHDN_00790 6.12e-94 - - - L - - - COG2826 Transposase and inactivated derivatives, IS30 family
BONDMHDN_00792 2.13e-171 tagA 2.4.1.187 GT26 F ko:K05946 ko05111,map05111 ko00000,ko00001,ko01000,ko01003 Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
BONDMHDN_00793 2.94e-261 - - - M - - - Glycosyl transferases group 1
BONDMHDN_00794 0.0 pncB 6.3.4.21 - F ko:K00763 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BONDMHDN_00795 1.91e-195 nadE 6.3.1.5 - F ko:K01916 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
BONDMHDN_00796 4e-260 tnpB - - L ko:K07496 - ko00000 Putative transposase DNA-binding domain
BONDMHDN_00797 0.0 pacL 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
BONDMHDN_00798 9.16e-287 - - - M - - - CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
BONDMHDN_00799 0.0 epsU - - S ko:K03328 - ko00000 Polysaccharide biosynthesis protein
BONDMHDN_00800 5.48e-173 - - - M - - - Glycosyltransferase sugar-binding region containing DXD motif
BONDMHDN_00801 2.24e-110 ydcK - - S ko:K03095 - ko00000 Belongs to the SprT family
BONDMHDN_00803 3.29e-127 acmA 3.2.1.17, 3.2.1.96 - NU ko:K01185,ko:K01227 ko00511,map00511 ko00000,ko00001,ko01000 mannosyl-glycoprotein
BONDMHDN_00804 0.0 pcrA 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase
BONDMHDN_00805 0.0 ligA 6.5.1.2 - L ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 ko00000,ko00001,ko01000,ko03032,ko03400 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
BONDMHDN_00806 6.25e-268 camS - - S - - - sex pheromone
BONDMHDN_00807 5.42e-67 gatC 6.3.5.6, 6.3.5.7 - J ko:K02435 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BONDMHDN_00808 0.0 gatA 6.3.5.6, 6.3.5.7 - J ko:K02433 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
BONDMHDN_00809 0.0 gatB 6.3.5.6, 6.3.5.7 - J ko:K02434 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BONDMHDN_00810 3.93e-219 dagK 2.7.1.107 - G ko:K07029 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko01000 Lipid kinase
BONDMHDN_00812 4.45e-84 - - - K - - - transcriptional regulator
BONDMHDN_00813 4.83e-144 ybhL - - S ko:K06890 - ko00000 Belongs to the BI1 family
BONDMHDN_00814 1.64e-65 - - - - - - - -
BONDMHDN_00815 7.58e-291 nhaC - - C ko:K03315 - ko00000,ko02000 Na H antiporter NhaC
BONDMHDN_00816 5.63e-254 flp - - V - - - Beta-lactamase
BONDMHDN_00817 0.0 rumA_2 2.1.1.190 - J ko:K03215 - ko00000,ko01000,ko03009 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BONDMHDN_00818 1.42e-122 - - - K - - - Acetyltransferase (GNAT) domain
BONDMHDN_00823 0.0 qacA - - EGP - - - Major Facilitator
BONDMHDN_00824 1.46e-117 - - - K - - - Bacterial regulatory proteins, tetR family
BONDMHDN_00825 0.0 - 4.2.1.53 - S ko:K10254 - ko00000,ko01000 Myosin-crossreactive antigen
BONDMHDN_00827 3.35e-101 menA 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 UbiA prenyltransferase family
BONDMHDN_00828 1.25e-17 - - - - - - - -
BONDMHDN_00829 2.77e-220 pphA 3.1.3.16 - T ko:K07313 - ko00000,ko01000 Calcineurin-like phosphoesterase
BONDMHDN_00830 1.04e-41 - - - - - - - -
BONDMHDN_00832 3.65e-90 - - - S - - - Iron-sulphur cluster biosynthesis
BONDMHDN_00833 1.08e-145 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
BONDMHDN_00834 4.51e-77 psiE - - S ko:K13256 - ko00000 Phosphate-starvation-inducible E
BONDMHDN_00836 6.58e-175 nfrA 1.5.1.38 - C ko:K19285 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 nitroreductase
BONDMHDN_00837 1.49e-290 amt - - P ko:K03320 - ko00000,ko02000 ammonium transporter
BONDMHDN_00838 7.82e-80 - - - - - - - -
BONDMHDN_00839 0.0 - - - L ko:K03724 - ko00000,ko01000,ko03400 DEAD DEAH box helicase
BONDMHDN_00840 4.13e-310 - - - P - - - P-loop Domain of unknown function (DUF2791)
BONDMHDN_00841 0.0 - - - S - - - TerB-C domain
BONDMHDN_00842 0.0 pckA 4.1.1.49 - H ko:K01610 ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Phosphoenolpyruvate carboxykinase
BONDMHDN_00843 0.0 - - - V ko:K06147,ko:K06148 - ko00000,ko02000 ABC transporter transmembrane region
BONDMHDN_00844 6.94e-202 - - - K - - - Helix-turn-helix XRE-family like proteins
BONDMHDN_00845 9.05e-78 apfA 3.6.1.61 - F ko:K18445 ko00230,map00230 ko00000,ko00001,ko01000 Nudix hydrolase
BONDMHDN_00846 3.36e-42 - - - - - - - -
BONDMHDN_00847 2.53e-100 - 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Carboxymuconolactone decarboxylase family
BONDMHDN_00848 5.26e-36 - 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Carboxymuconolactone decarboxylase family
BONDMHDN_00849 2.7e-277 mtlD 1.1.1.17 - C ko:K00009 ko00051,map00051 ko00000,ko00001,ko01000 mannitol-1-phosphate 5-dehydrogenase activity
BONDMHDN_00850 5.75e-103 mtlF 2.7.1.197 - G ko:K02798 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BONDMHDN_00851 0.0 mtlA 2.7.1.197 - G ko:K02799,ko:K02800 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
BONDMHDN_00852 0.0 mtlR - - K ko:K03483 - ko00000,ko03000 Mga helix-turn-helix domain
BONDMHDN_00853 0.0 glmS 2.6.1.16 - M ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 ko00000,ko00001,ko01000,ko01002 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
BONDMHDN_00854 1.14e-144 adhE 1.1.1.1, 1.2.1.10 - C ko:K04072 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 belongs to the iron- containing alcohol dehydrogenase family
BONDMHDN_00855 0.0 adhE 1.1.1.1, 1.2.1.10 - C ko:K04072 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 belongs to the iron- containing alcohol dehydrogenase family
BONDMHDN_00856 1.38e-309 cycA - - E ko:K03293,ko:K11737 - ko00000,ko02000 Amino acid permease
BONDMHDN_00857 7.06e-111 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 transferase hexapeptide repeat
BONDMHDN_00858 3.57e-204 - - - K - - - Transcriptional regulator
BONDMHDN_00859 1.31e-81 - - - S - - - Domain of unknown function (DUF956)
BONDMHDN_00860 3.51e-222 manN - - G ko:K02796 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 system, mannose fructose sorbose family IID component
BONDMHDN_00861 9.65e-181 manY - - G ko:K02746,ko:K02795 ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system
BONDMHDN_00862 4.5e-235 manL 2.7.1.191 - G ko:K02793,ko:K02794 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system sorbose subfamily IIB component
BONDMHDN_00864 3.79e-175 purD 6.3.4.13 - F ko:K01945 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the GARS family
BONDMHDN_00865 7.36e-135 - - - C - - - Flavodoxin
BONDMHDN_00866 2.27e-191 hflC - - O ko:K04087 - ko00000,ko00002,ko01000 prohibitin homologues
BONDMHDN_00867 1.8e-66 - - - L ko:K07473 - ko00000,ko02048 RelB antitoxin
BONDMHDN_00868 2.39e-26 - - - - - - - -
BONDMHDN_00869 1.79e-245 - - - S - - - Bacteriocin helveticin-J
BONDMHDN_00870 1.86e-197 - - - M - - - Peptidase family M1 domain
BONDMHDN_00871 9.84e-108 - - - L - - - Resolvase, N-terminal
BONDMHDN_00872 4.5e-107 tnpB - - L ko:K07496 - ko00000 Putative transposase DNA-binding domain
BONDMHDN_00873 4.2e-93 tnpB - - L ko:K07496 - ko00000 Putative transposase DNA-binding domain
BONDMHDN_00874 7.29e-220 - - - S - - - SLAP domain
BONDMHDN_00875 3.31e-299 mepA - - V ko:K18908 - ko00000,ko00002,ko01504,ko02000 MATE efflux family protein
BONDMHDN_00876 2.23e-314 murC 6.3.2.8 - M ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Belongs to the MurCDEF family
BONDMHDN_00877 5.28e-251 - - - - - - - -
BONDMHDN_00878 8.78e-157 XK27_10290 - - J ko:K06878 - ko00000 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
BONDMHDN_00879 1.35e-71 ytpP - - CO - - - Thioredoxin
BONDMHDN_00881 2.16e-163 trmB 2.1.1.33 - J ko:K03439 - ko00000,ko01000,ko03016 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
BONDMHDN_00882 5.7e-282 ecsB - - U ko:K01992 - ko00000,ko00002,ko02000 ABC transporter
BONDMHDN_00883 1.05e-173 ecsA - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
BONDMHDN_00884 1.61e-101 hit - - FG ko:K02503 - ko00000,ko04147 Scavenger mRNA decapping enzyme C-term binding
BONDMHDN_00885 1.2e-41 - - - - - - - -
BONDMHDN_00886 1.09e-196 prsA 5.2.1.8 - M ko:K07533 - ko00000,ko01000,ko03110 Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
BONDMHDN_00887 5.74e-96 eda 4.1.2.14, 4.1.3.42 - G ko:K01625 ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 KDPG and KHG aldolase
BONDMHDN_00888 0.0 - - - - - - - -
BONDMHDN_00889 9.67e-33 - - - S - - - Domain of unknown function DUF1829
BONDMHDN_00891 4.53e-239 yhaM - - S ko:K03698 - ko00000,ko01000,ko03019 Metal dependent phosphohydrolases with conserved 'HD' motif.
BONDMHDN_00892 0.0 yhaN - - L - - - AAA domain
BONDMHDN_00893 1.88e-292 yhaO - - L ko:K03547 - ko00000,ko03400 Ser Thr phosphatase family protein
BONDMHDN_00894 8.43e-73 yheA - - S - - - Belongs to the UPF0342 family
BONDMHDN_00895 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M ko:K12555 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 penicillin-binding protein
BONDMHDN_00896 2.09e-208 rluA 5.4.99.23, 5.4.99.28, 5.4.99.29 - J ko:K06177,ko:K06180 - ko00000,ko01000,ko03009,ko03016 Responsible for synthesis of pseudouridine from uracil
BONDMHDN_00897 0.0 pps 2.7.9.2 - H ko:K01007 ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
BONDMHDN_00898 1.49e-13 - - - G - - - Phosphoglycerate mutase family
BONDMHDN_00899 1.91e-102 - - - G - - - Phosphoglycerate mutase family
BONDMHDN_00900 4.24e-127 B4168_4126 - - L ko:K07493 - ko00000 Transposase
BONDMHDN_00901 1.44e-234 - - - L - - - Phage integrase family
BONDMHDN_00902 3.94e-85 rpsI - - J ko:K02996 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS9 family
BONDMHDN_00903 3.22e-103 rplM - - J ko:K02871 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BONDMHDN_00904 1.06e-185 truA 5.4.99.12 - J ko:K06173 - ko00000,ko01000,ko03016 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
BONDMHDN_00905 5.12e-174 ecfT - - U ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BONDMHDN_00906 5.5e-202 ecfA2 - - P ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BONDMHDN_00907 1.02e-198 ecfA1 - - P ko:K16786 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BONDMHDN_00908 2.23e-80 rplQ - - J ko:K02879 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L17
BONDMHDN_00909 3.62e-218 rpoA 2.7.7.6 - K ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BONDMHDN_00910 3.82e-82 rpsK - - J ko:K02948 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BONDMHDN_00911 3.44e-72 rpsM - - J ko:K02952 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BONDMHDN_00912 1.89e-21 rpmJ - - J ko:K02919 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL36 family
BONDMHDN_00913 3.13e-46 infA - - J ko:K02518 - ko00000,ko03012 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BONDMHDN_00914 3.7e-155 adk 2.7.4.3 - F ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
BONDMHDN_00915 1.25e-301 secY - - U ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
BONDMHDN_00916 4.95e-93 rplO - - J ko:K02876 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
BONDMHDN_00917 2.22e-34 rpmD - - J ko:K02907 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L30
BONDMHDN_00918 3.73e-110 rpsE - - J ko:K02988 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
BONDMHDN_00919 2.8e-72 rplR - - J ko:K02881 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
BONDMHDN_00920 7.18e-121 rplF - - J ko:K02933 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BONDMHDN_00921 7.94e-90 rpsH - - J ko:K02994 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
BONDMHDN_00922 1e-39 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BONDMHDN_00923 1.23e-123 rplE - - J ko:K02931 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
BONDMHDN_00924 3.03e-44 rplX - - J ko:K02895 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
BONDMHDN_00925 3.62e-79 rplN - - J ko:K02874 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
BONDMHDN_00926 1.56e-55 rpsQ - - J ko:K02961 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
BONDMHDN_00927 1.45e-34 rpmC - - J ko:K02904 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uL29 family
BONDMHDN_00928 1.66e-100 rplP - - J ko:K02878 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BONDMHDN_00929 8.7e-157 rpsC - - J ko:K02982 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
BONDMHDN_00930 9.07e-73 rplV - - J ko:K02890 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
BONDMHDN_00931 1.14e-62 rpsS - - J ko:K02965 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BONDMHDN_00932 4.01e-198 rplB - - J ko:K02886 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
BONDMHDN_00933 1.14e-63 rplW - - J ko:K02892 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
BONDMHDN_00934 4.68e-138 rplD - - J ko:K02926 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the polypeptide exit tunnel
BONDMHDN_00935 6.64e-146 rplC - - J ko:K02906 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
BONDMHDN_00936 6.34e-66 rpsJ - - J ko:K02946 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Involved in the binding of tRNA to the ribosomes
BONDMHDN_00937 0.0 fusA - - J ko:K02355 - ko00000,ko03012,ko03029 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BONDMHDN_00938 8.05e-106 rpsG - - J ko:K02992 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
BONDMHDN_00939 1.47e-91 rpsL - - J ko:K02950 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
BONDMHDN_00940 7.71e-157 comC 3.4.23.43 - NOU ko:K02236 - ko00000,ko00002,ko01000,ko02044 Bacterial Peptidase A24 N-terminal domain
BONDMHDN_00941 0.0 rpoC 2.7.7.6 - K ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BONDMHDN_00942 0.0 rpoB 2.7.7.6 - K ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BONDMHDN_00943 0.0 clpC - - O ko:K03696 ko01100,map01100 ko00000,ko03110 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
BONDMHDN_00944 1.92e-106 ytsP 1.8.4.14 - T ko:K08968 ko00270,map00270 ko00000,ko00001,ko01000 GAF domain-containing protein
BONDMHDN_00948 3.09e-71 - - - - - - - -
BONDMHDN_00949 2.96e-23 ytxG - - S - - - protein containing a divergent version of the methyl-accepting chemotaxis-like domain
BONDMHDN_00950 8.56e-181 ykuT - - M ko:K16052,ko:K22044 - ko00000,ko02000 mechanosensitive ion channel
BONDMHDN_00952 7.95e-06 - - - - - - - -
BONDMHDN_00953 2.84e-150 - - - K - - - sequence-specific DNA binding
BONDMHDN_00955 2.43e-145 rdgB 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BONDMHDN_00956 2.91e-186 murI 3.6.1.66, 5.1.1.3 - M ko:K01776,ko:K02428 ko00230,ko00471,ko01100,map00230,map00471,map01100 ko00000,ko00001,ko01000,ko01011 Provides the (R)-glutamate required for cell wall biosynthesis
BONDMHDN_00957 5.62e-95 yslB - - S - - - Protein of unknown function (DUF2507)
BONDMHDN_00958 2.34e-76 mscL - - M ko:K03282 - ko00000,ko02000 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
BONDMHDN_00959 2.19e-71 trxA - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Belongs to the thioredoxin family
BONDMHDN_00960 0.0 mutS2 - - L ko:K07456 ko03430,map03430 ko00000,ko00001,ko03400 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
BONDMHDN_00961 1.18e-66 yrzB - - S - - - Belongs to the UPF0473 family
BONDMHDN_00962 9.37e-96 yrrK - - J ko:K07447 - ko00000,ko01000 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
BONDMHDN_00963 5.32e-57 yrzL - - S - - - Belongs to the UPF0297 family
BONDMHDN_00964 0.0 alaS 6.1.1.7 - J ko:K01872 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BONDMHDN_00965 1.32e-305 cshB 3.6.4.13 - JKL ko:K05592,ko:K18692 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
BONDMHDN_00966 7.44e-230 nrnA 3.1.13.3, 3.1.3.7 - S ko:K06881 ko00920,ko01100,ko01120,map00920,map01100,map01120 ko00000,ko00001,ko01000,ko03400 DHHA1 domain protein
BONDMHDN_00967 6.15e-268 dinB 2.7.7.7 - L ko:K02346 - ko00000,ko01000,ko03400 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BONDMHDN_00968 0.0 zwf 1.1.1.363, 1.1.1.49 - G ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BONDMHDN_00969 7.58e-69 yajC - - U ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase
BONDMHDN_00970 1.39e-237 ruvB 3.6.4.12 - L ko:K03551 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
BONDMHDN_00971 3.89e-132 ruvA 3.6.4.12 - L ko:K03550 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
BONDMHDN_00972 0.0 mutL - - L ko:K03572 ko03430,map03430 ko00000,ko00001,ko03400 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
BONDMHDN_00973 0.0 mutS - - L ko:K03555 ko03430,map03430 ko00000,ko00001,ko03400 that it carries out the mismatch recognition step. This protein has a weak ATPase activity
BONDMHDN_00974 0.0 groL - - O ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
BONDMHDN_00975 1.06e-58 groS - - O ko:K04078 - ko00000,ko03029,ko03110 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BONDMHDN_00976 2.79e-102 - - - - - - - -
BONDMHDN_00977 2.14e-231 - - - M - - - CHAP domain
BONDMHDN_00978 0.0 scrA 2.7.1.211 - G ko:K02808,ko:K02809,ko:K02810 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
BONDMHDN_00979 0.0 scrB 3.2.1.26 GH32 G ko:K01193 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 invertase
BONDMHDN_00980 2.14e-234 scrR - - K ko:K03484 - ko00000,ko03000 helix_turn _helix lactose operon repressor
BONDMHDN_00982 1.01e-240 yagE - - E - - - Amino acid permease
BONDMHDN_00983 9.58e-112 - 3.4.21.96 - S ko:K01361 - ko00000,ko01000,ko01002,ko03110 SLAP domain
BONDMHDN_00984 1.15e-205 XK27_10395 - - S - - - Uncharacterised 5xTM membrane BCR, YitT family COG1284
BONDMHDN_00985 5.13e-287 cca 2.7.7.72 - J ko:K00974 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
BONDMHDN_00986 1.8e-143 hlyIII - - S ko:K11068 - ko00000,ko02042 protein, hemolysin III
BONDMHDN_00987 8.83e-187 degV3 - - S - - - Uncharacterised protein, DegV family COG1307
BONDMHDN_00988 9.85e-49 yozE - - S - - - Belongs to the UPF0346 family
BONDMHDN_00989 3.67e-88 - - - P - - - NhaP-type Na H and K H
BONDMHDN_00990 7.2e-49 nhaP4 - - P ko:K03316 - ko00000 Sodium proton antiporter
BONDMHDN_00991 2.4e-118 nhaP4 - - P ko:K03316 - ko00000 Sodium proton antiporter
BONDMHDN_00992 2.15e-198 rbgA - - S ko:K14540 - ko00000,ko03009 Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BONDMHDN_00993 1e-168 rnhB 3.1.26.4 - L ko:K03470 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BONDMHDN_00994 1.5e-195 dprA - - LU ko:K04096 - ko00000 DNA protecting protein DprA
BONDMHDN_00995 0.0 topA 5.99.1.2 - L ko:K03168 - ko00000,ko01000,ko03032,ko03400 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BONDMHDN_00996 8.35e-315 trmFO 2.1.1.74 - J ko:K04094 - ko00000,ko01000,ko03016,ko03036 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
BONDMHDN_00997 5.99e-180 xerC - - D ko:K03733,ko:K04763 - ko00000,ko03036 Phage integrase, N-terminal SAM-like domain
BONDMHDN_00998 4.67e-116 hslV 3.4.25.2 - O ko:K01419 - ko00000,ko01000,ko01002 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
BONDMHDN_00999 1.4e-313 hslU - - O ko:K03667 - ko00000,ko03110 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
BONDMHDN_01000 9.4e-232 lacX 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Aldose 1-epimerase
BONDMHDN_01001 6.42e-110 - - - C - - - Aldo keto reductase
BONDMHDN_01002 8.85e-121 - - - M - - - LysM domain protein
BONDMHDN_01003 3.71e-195 - - - L - - - Phage integrase, N-terminal SAM-like domain
BONDMHDN_01004 9.28e-89 crcB1 - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BONDMHDN_01005 2.95e-84 crcB - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BONDMHDN_01006 1.31e-16 mmuM 2.1.1.10 - H ko:K00547 ko00270,ko01100,ko01110,map00270,map01100,map01110 ko00000,ko00001,ko01000 homocysteine S-methyltransferase
BONDMHDN_01007 2.47e-144 ybgF - - E ko:K02205,ko:K03293,ko:K16235,ko:K16236 - ko00000,ko02000 amino acid
BONDMHDN_01008 0.0 pepV 3.5.1.18 - E ko:K01270,ko:K01274,ko:K01439 ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000,ko01002 dipeptidase PepV
BONDMHDN_01009 9.58e-122 - - - C - - - Pyridoxamine 5'-phosphate oxidase
BONDMHDN_01010 0.0 - - - E - - - Amino acid permease
BONDMHDN_01011 0.0 speA 4.1.1.17, 4.1.1.18, 4.1.1.19 - E ko:K01581,ko:K01582,ko:K01585 ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Orn/Lys/Arg decarboxylase, C-terminal domain
BONDMHDN_01012 5.81e-310 ynbB - - P - - - aluminum resistance
BONDMHDN_01013 0.0 recQ 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
BONDMHDN_01014 3.6e-106 - - - C - - - Flavodoxin
BONDMHDN_01015 5.62e-134 - - - K - - - Helix-turn-helix domain, rpiR family
BONDMHDN_01016 1.52e-105 - - - L - - - MgsA AAA+ ATPase C terminal
BONDMHDN_01017 2.53e-287 lacE 2.7.1.207 - G ko:K02761,ko:K02787,ko:K02788 ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BONDMHDN_01019 2.77e-135 - - - K ko:K06977 - ko00000 acetyltransferase
BONDMHDN_01020 5.45e-121 hpt 2.4.2.8 - F ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the purine pyrimidine phosphoribosyltransferase family
BONDMHDN_01021 6.16e-14 - - - - - - - -
BONDMHDN_01022 8.75e-197 - - - - - - - -
BONDMHDN_01023 0.0 malH 3.2.1.122 GH4 G ko:K01232 ko00500,map00500 ko00000,ko00001,ko01000 Family 4 glycosyl hydrolase C-terminal domain
BONDMHDN_01024 8.28e-176 - - - K ko:K03481 - ko00000,ko03000 Helix-turn-helix domain, rpiR family
BONDMHDN_01025 4.71e-239 ansA 3.5.1.1 - EJ ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 ko00000,ko00001,ko01000 L-asparaginase, type I
BONDMHDN_01026 4.65e-14 - - - - - - - -
BONDMHDN_01027 1.42e-57 - - - - - - - -
BONDMHDN_01028 7.34e-86 - 2.7.1.191 - G ko:K02793 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system fructose IIA component
BONDMHDN_01029 0.0 pacL3 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
BONDMHDN_01030 2.7e-162 - - - - - - - -
BONDMHDN_01031 1.87e-308 - - - S - - - response to antibiotic
BONDMHDN_01032 7.53e-163 gpm2 - - G - - - Phosphoglycerate mutase family
BONDMHDN_01033 1.02e-148 XK27_08875 - - O - - - PFAM peptidase M10A and M12B, matrixin and adamalysin
BONDMHDN_01034 0.0 helD 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
BONDMHDN_01035 3e-139 yecS_2 - - P ko:K02029,ko:K02030 - ko00000,ko00002,ko02000 ABC transporter permease
BONDMHDN_01036 6.89e-136 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter
BONDMHDN_01037 7.09e-184 aatB - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein
BONDMHDN_01038 2.34e-97 yjcF - - S - - - Acetyltransferase (GNAT) domain
BONDMHDN_01039 1.13e-126 - - - E - - - GDSL-like Lipase/Acylhydrolase
BONDMHDN_01040 1.43e-220 coaA 2.7.1.33 - F ko:K00867 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Pantothenic acid kinase
BONDMHDN_01041 5.16e-135 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BONDMHDN_01043 1.02e-74 - - - S - - - Peptidase propeptide and YPEB domain
BONDMHDN_01044 1.45e-74 - - - K - - - Helix-turn-helix XRE-family like proteins
BONDMHDN_01045 1.39e-197 malG - - P ko:K15772 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
BONDMHDN_01046 0.0 malF - - P ko:K15771 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
BONDMHDN_01047 5.5e-282 - - - G ko:K15770 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
BONDMHDN_01048 7e-267 msmX - - P ko:K10112 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
BONDMHDN_01049 9.37e-150 pgmB 5.4.2.6 - S ko:K01838 ko00500,map00500 ko00000,ko00001,ko01000 beta-phosphoglucomutase
BONDMHDN_01050 0.0 mapA 2.4.1.8 GH65 G ko:K00691 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 hydrolase, family 65, central catalytic
BONDMHDN_01051 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G ko:K01208 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 13 family
BONDMHDN_01052 0.0 malA1 3.2.1.10, 3.2.1.20 GH13,GH31 G ko:K01182,ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain
BONDMHDN_01053 1.42e-42 XK27_04775 - - S ko:K09155 - ko00000 PAS domain
BONDMHDN_01054 3.2e-28 XK27_04775 - - S ko:K09155 - ko00000 PAS domain
BONDMHDN_01055 3.15e-259 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BONDMHDN_01056 6.1e-228 yvdE - - K - - - helix_turn _helix lactose operon repressor
BONDMHDN_01057 3.56e-186 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
BONDMHDN_01058 0.0 glpK 2.7.1.30 - F ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 ko00000,ko00001,ko01000,ko04147 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BONDMHDN_01059 2.61e-195 thiD 2.7.1.49, 2.7.4.7 - H ko:K00941 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Phosphomethylpyrimidine kinase
BONDMHDN_01060 1.3e-31 - - - - - - - -
BONDMHDN_01061 1.34e-175 - - - K - - - Helix-turn-helix XRE-family like proteins
BONDMHDN_01063 1.49e-151 - - - V - - - Abi-like protein
BONDMHDN_01064 5.19e-248 - - - G - - - Transmembrane secretion effector
BONDMHDN_01065 3.28e-133 - - - V - - - ABC transporter transmembrane region
BONDMHDN_01066 2.89e-151 phoU - - P ko:K02039 - ko00000 Plays a role in the regulation of phosphate uptake
BONDMHDN_01067 3.83e-178 pstB1 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
BONDMHDN_01068 5.24e-187 pstB2 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
BONDMHDN_01069 3.01e-197 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphate transport system permease protein PstA
BONDMHDN_01070 2.29e-210 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
BONDMHDN_01071 5.48e-201 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 Phosphate
BONDMHDN_01072 1.05e-160 rplA - - J ko:K02863 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
BONDMHDN_01073 3.82e-90 rplK - - J ko:K02867 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
BONDMHDN_01074 1.23e-130 nusG - - K ko:K02601 - ko00000,ko03009,ko03021 Participates in transcription elongation, termination and antitermination
BONDMHDN_01075 3.73e-33 secE - - U ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
BONDMHDN_01076 0.0 dxs 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
BONDMHDN_01077 0.0 gntK 2.7.1.12 - G ko:K00851 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko01000 Belongs to the FGGY kinase family
BONDMHDN_01078 1.19e-45 - - - - - - - -
BONDMHDN_01079 3.81e-123 comX - - K ko:K03088,ko:K03091,ko:K12296 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko03000,ko03021 Belongs to the sigma-70 factor family
BONDMHDN_01080 1.56e-177 trmH 2.1.1.185 - J ko:K03218 - ko00000,ko01000,ko03009 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BONDMHDN_01081 4.95e-98 mrnC - - J ko:K11145 - ko00000,ko01000,ko03009 Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
BONDMHDN_01082 0.0 cysS 6.1.1.16 - J ko:K01883 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
BONDMHDN_01083 0.0 gltX 6.1.1.24 - J ko:K09698 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BONDMHDN_01084 0.0 radA - - O ko:K04485 - ko00000,ko03400 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BONDMHDN_01085 5.22e-131 dut 3.6.1.23 - F ko:K01520 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 dUTP diphosphatase
BONDMHDN_01086 2.23e-69 - - - - - - - -
BONDMHDN_01087 0.0 pepC 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
BONDMHDN_01088 1.99e-235 - - - S - - - AAA domain
BONDMHDN_01089 3.43e-164 gpmA1 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BONDMHDN_01090 2.42e-33 - - - - - - - -
BONDMHDN_01091 8.43e-206 - - - P ko:K16264 - ko00000,ko02000 cation diffusion facilitator family transporter
BONDMHDN_01092 3.16e-160 - - - G - - - Belongs to the phosphoglycerate mutase family
BONDMHDN_01093 8.08e-160 licC - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BONDMHDN_01094 2.57e-108 licC - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BONDMHDN_01095 1.33e-130 - - - M - - - LysM domain protein
BONDMHDN_01096 5.68e-211 - - - D - - - nuclear chromosome segregation
BONDMHDN_01097 8.92e-136 - - - G - - - Phosphoglycerate mutase family
BONDMHDN_01098 9.01e-115 - - - G - - - Histidine phosphatase superfamily (branch 1)
BONDMHDN_01099 1.9e-153 - - - G - - - Antibiotic biosynthesis monooxygenase
BONDMHDN_01100 2.67e-148 glpQ1 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 glycerophosphoryl diester phosphodiesterase
BONDMHDN_01102 0.0 mgtA 3.6.3.2 - P ko:K01531 - ko00000,ko01000 COG0474 Cation transport ATPase
BONDMHDN_01104 1.93e-266 araT 2.6.1.57 - E ko:K00832,ko:K00841 ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
BONDMHDN_01105 1.03e-237 XK27_10475 - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
BONDMHDN_01106 3.01e-154 rpiA1 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
BONDMHDN_01107 1.43e-186 - - - K - - - SIS domain
BONDMHDN_01108 9.6e-309 slpX - - S - - - SLAP domain
BONDMHDN_01109 5.24e-31 - - - S - - - transposase or invertase
BONDMHDN_01110 1.48e-14 - - - - - - - -
BONDMHDN_01111 7.62e-306 npr 1.11.1.1 - C ko:K05910 - ko00000,ko01000 NADH oxidase
BONDMHDN_01114 0.0 oppA2 - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
BONDMHDN_01115 1.53e-232 - - - - - - - -
BONDMHDN_01116 1.87e-159 gntR1 - - K ko:K03710 - ko00000,ko03000 UTRA
BONDMHDN_01117 3.68e-93 tagD 2.7.7.39 - IM ko:K00980 ko00564,map00564 ko00000,ko00001,ko01000 Glycerol-3-phosphate cytidylyltransferase
BONDMHDN_01118 9.7e-127 - - - E ko:K02054 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
BONDMHDN_01119 6.18e-123 rihC 3.2.2.1 - F ko:K01239,ko:K01250,ko:K12700 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 Nucleoside
BONDMHDN_01120 1.07e-93 infC - - J ko:K02520 - ko00000,ko03012,ko03029 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BONDMHDN_01121 9.64e-38 rpmI - - J ko:K02916 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL35 family
BONDMHDN_01122 8.69e-76 rplT - - J ko:K02887 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
BONDMHDN_01123 5.28e-193 add 3.5.4.2, 3.5.4.4 - F ko:K01488,ko:K02029,ko:K21053 ko00230,ko01100,ko05340,map00230,map01100,map05340 ko00000,ko00001,ko00002,ko01000,ko02000 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BONDMHDN_01124 3.01e-255 tnpB - - L ko:K07496 - ko00000 Putative transposase DNA-binding domain
BONDMHDN_01125 6.85e-109 yqeG - - S ko:K07015 - ko00000 HAD phosphatase, family IIIA
BONDMHDN_01126 5.03e-256 yqeH - - S ko:K06948 - ko00000,ko03009 Ribosome biogenesis GTPase YqeH
BONDMHDN_01127 1.77e-157 nadD 2.7.7.18 - H ko:K00969 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BONDMHDN_01128 9.22e-141 yqeK - - H - - - Hydrolase, HD family
BONDMHDN_01129 5.95e-77 rsfS - - J ko:K09710 - ko00000,ko03009 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
BONDMHDN_01130 8.01e-276 ylbM - - S - - - Belongs to the UPF0348 family
BONDMHDN_01131 2.19e-125 ylbN - - S ko:K07040 - ko00000 Uncharacterized ACR, COG1399
BONDMHDN_01132 3.52e-163 csrR - - K - - - response regulator
BONDMHDN_01133 0.0 arlS 2.7.13.3 - T ko:K18940 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
BONDMHDN_01134 2.19e-18 - - - - - - - -
BONDMHDN_01135 4.28e-125 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
BONDMHDN_01136 4.76e-170 - - - S - - - SLAP domain
BONDMHDN_01137 2.05e-107 - - - S - - - SLAP domain
BONDMHDN_01138 1.13e-108 - - - S ko:K19055 - ko00000,ko01000,ko03016 Aminoacyl-tRNA editing domain
BONDMHDN_01139 2.43e-216 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
BONDMHDN_01140 5.58e-59 acyP 3.6.1.7 - C ko:K01512 ko00620,ko00627,ko01120,map00620,map00627,map01120 ko00000,ko00001,ko01000 Belongs to the acylphosphatase family
BONDMHDN_01141 1.37e-173 spoU - - J ko:K03437 - ko00000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BONDMHDN_01142 3.71e-76 yodB - - K - - - Transcriptional regulator, HxlR family
BONDMHDN_01144 1.81e-139 glnP9 - - P ko:K02029 - ko00000,ko00002,ko02000 ABC transporter, permease protein
BONDMHDN_01145 1.96e-148 glnP7 - - P ko:K02029 - ko00000,ko00002,ko02000 ABC transporter permease
BONDMHDN_01146 7.91e-164 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
BONDMHDN_01147 1.2e-202 cjaA - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein
BONDMHDN_01148 2.9e-254 pheS 6.1.1.20 - J ko:K01889 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BONDMHDN_01149 0.0 pheT 6.1.1.20 - J ko:K01890 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
BONDMHDN_01150 2.55e-94 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
BONDMHDN_01151 3.9e-213 ldh3 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 lactate/malate dehydrogenase, alpha/beta C-terminal domain
BONDMHDN_01152 5.88e-181 metQ - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the nlpA lipoprotein family
BONDMHDN_01153 1.8e-34 - - - - - - - -
BONDMHDN_01154 0.0 sufI - - Q - - - Multicopper oxidase
BONDMHDN_01155 1.76e-193 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
BONDMHDN_01156 0.0 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter
BONDMHDN_01157 8.29e-294 - - - Q - - - Imidazolonepropionase and related amidohydrolases
BONDMHDN_01158 2.48e-313 - - - S ko:K12941 - ko00000,ko01002 Peptidase dimerisation domain
BONDMHDN_01159 3.2e-176 - - - S - - - Protein of unknown function (DUF3100)
BONDMHDN_01160 2.04e-60 - - - S - - - An automated process has identified a potential problem with this gene model
BONDMHDN_01161 6.91e-67 - 2.7.7.49 - L ko:K00986 - ko00000,ko01000 PFAM RNA-directed DNA polymerase (Reverse transcriptase)
BONDMHDN_01162 3.7e-164 - - - S - - - SLAP domain
BONDMHDN_01163 1.75e-120 - - - - - - - -
BONDMHDN_01165 4.07e-158 - - - M ko:K14193 ko05150,map05150 ko00000,ko00001 Iron Transport-associated domain
BONDMHDN_01166 1.7e-202 isdE - - P ko:K02016 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Periplasmic binding protein
BONDMHDN_01167 2.2e-201 isdF - - U ko:K02015 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BONDMHDN_01168 1.49e-178 - 3.6.3.34 - HP ko:K02013 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 abc transporter atp-binding protein
BONDMHDN_01169 2.22e-60 hupB2 - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
BONDMHDN_01170 2.74e-69 - - - S ko:K19157 - ko00000,ko01000,ko02048 Bacterial toxin of type II toxin-antitoxin system, YafQ
BONDMHDN_01171 9.43e-52 - - - S ko:K07473 - ko00000,ko02048 RelB antitoxin
BONDMHDN_01172 7.04e-218 - - - G - - - BadF/BadG/BcrA/BcrD ATPase family
BONDMHDN_01173 0.0 - - - S - - - membrane
BONDMHDN_01174 0.0 pbp2b - - M ko:K00687,ko:K12553,ko:K21465,ko:K21466 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011 Penicillin-binding Protein
BONDMHDN_01175 6.25e-29 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL33 family
BONDMHDN_01176 1.94e-126 fthC 6.3.3.2 - H ko:K01934 ko00670,ko01100,map00670,map01100 ko00000,ko00001,ko01000 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BONDMHDN_01177 9.32e-154 gluP 3.4.21.105 - S ko:K19225 - ko00000,ko01000,ko01002 Rhomboid family
BONDMHDN_01178 1e-47 yqgQ - - S - - - Bacterial protein of unknown function (DUF910)
BONDMHDN_01179 4.95e-89 yqhL - - P - - - Rhodanese-like protein
BONDMHDN_01180 1.9e-216 miaA 2.5.1.75 - F ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 ko00000,ko00001,ko01000,ko01006,ko03016 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BONDMHDN_01181 1.74e-282 ynbB - - P - - - aluminum resistance
BONDMHDN_01182 0.0 glnA 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 glutamine synthetase
BONDMHDN_01183 9.64e-219 - - - - - - - -
BONDMHDN_01184 1.21e-204 - - - - - - - -
BONDMHDN_01188 6.78e-47 - - - - - - - -
BONDMHDN_01189 1.94e-165 - - - S - - - interspecies interaction between organisms
BONDMHDN_01190 1.28e-09 - - - S - - - PFAM HicB family
BONDMHDN_01191 2.86e-13 - - - K ko:K15773 - ko00000,ko02048,ko03000 peptidyl-tyrosine sulfation
BONDMHDN_01192 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
BONDMHDN_01193 1.57e-84 - - - K - - - Helix-turn-helix domain, rpiR family
BONDMHDN_01194 5.61e-156 nanA 4.1.3.3 - EM ko:K01639 ko00520,map00520 ko00000,ko00001,ko01000 Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
BONDMHDN_01195 1.03e-112 nanK - - GK - - - ROK family
BONDMHDN_01196 3.74e-70 - - - G - - - Xylose isomerase domain protein TIM barrel
BONDMHDN_01197 6.95e-165 napA - - P - - - Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
BONDMHDN_01198 6.48e-279 - - - E ko:K03307 - ko00000 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BONDMHDN_01199 2.82e-84 cah 3.1.1.41 - Q ko:K01060 ko00311,ko01130,map00311,map01130 ko00000,ko00001,ko01000 Acetyl xylan esterase (AXE1)
BONDMHDN_01200 1.48e-28 axe1 3.1.1.41 - Q ko:K01060 ko00311,ko01130,map00311,map01130 ko00000,ko00001,ko01000 acetyl xylan esterase
BONDMHDN_01201 1.19e-141 nanE 5.1.3.9 - G ko:K01788 ko00520,map00520 ko00000,ko00001,ko01000 Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
BONDMHDN_01202 1.1e-155 nagA 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Belongs to the metallo-dependent hydrolases superfamily. NagA family
BONDMHDN_01203 3.07e-136 - - - S - - - Alpha/beta hydrolase family
BONDMHDN_01204 7.93e-139 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
BONDMHDN_01205 1.64e-19 - - - - - - - -
BONDMHDN_01207 0.0 uvrA2 - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 excinuclease ABC, A subunit
BONDMHDN_01208 3.73e-240 mmuM 2.1.1.10 - H ko:K00547 ko00270,ko01100,ko01110,map00270,map01100,map01110 ko00000,ko00001,ko01000 homocysteine S-methyltransferase
BONDMHDN_01209 5.94e-148 - - - I - - - Acid phosphatase homologues
BONDMHDN_01210 1.12e-104 yvbK - - K - - - COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
BONDMHDN_01211 8.83e-147 maa3 2.3.1.79 - S ko:K00661 - ko00000,ko01000 transferase hexapeptide repeat
BONDMHDN_01212 1.59e-259 pbpX1 - - V - - - Beta-lactamase
BONDMHDN_01213 3.1e-127 pdxK 2.7.1.35 - H ko:K00868 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko01000 Phosphomethylpyrimidine kinase
BONDMHDN_01214 7.89e-124 - - - S - - - ECF-type riboflavin transporter, S component
BONDMHDN_01215 4.6e-291 - - - S - - - Putative peptidoglycan binding domain
BONDMHDN_01216 1.41e-108 - - - K - - - Acetyltransferase (GNAT) domain
BONDMHDN_01217 0.0 yqjE 3.4.11.14, 3.4.11.4 - E ko:K01258,ko:K01263 - ko00000,ko01000,ko01002 Cleaves the N-terminal amino acid of tripeptides
BONDMHDN_01218 1.13e-241 - - - L ko:K07478 - ko00000 AAA C-terminal domain
BONDMHDN_01219 2.76e-86 spxA - - K ko:K16509 - ko00000 Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
BONDMHDN_01220 0.0 treB - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
BONDMHDN_01221 2.09e-129 treR - - K ko:K03486 - ko00000,ko03000 UTRA
BONDMHDN_01222 0.0 treC 3.2.1.93 GH13 G ko:K01226 ko00500,map00500 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain protein
BONDMHDN_01224 2.55e-177 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
BONDMHDN_01225 6.73e-107 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
BONDMHDN_01226 4.09e-80 - - - S ko:K07006 - ko00000 Pyridoxamine 5'-phosphate oxidase
BONDMHDN_01227 4e-300 XK27_01810 - - S - - - Calcineurin-like phosphoesterase
BONDMHDN_01233 5.95e-114 ymdB - - S - - - Macro domain protein
BONDMHDN_01234 7e-242 mdtG2 - - EGP ko:K08161 - ko00000,ko02000 Transporter, major facilitator family protein
BONDMHDN_01235 7.62e-223 - - - - - - - -
BONDMHDN_01236 0.0 phoR 2.7.13.3 - T ko:K07636 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
BONDMHDN_01237 6.08e-153 phoB - - T ko:K07658 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Transcriptional regulatory protein, C terminal
BONDMHDN_01238 3.12e-135 - - - P ko:K02039 - ko00000 Plays a role in the regulation of phosphate uptake
BONDMHDN_01239 1.68e-177 pstB 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
BONDMHDN_01240 4.1e-193 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphate transport system permease protein PstA
BONDMHDN_01241 5.64e-201 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
BONDMHDN_01242 2.34e-187 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 Phosphate
BONDMHDN_01243 5.68e-34 - - - L - - - Phage integrase, N-terminal SAM-like domain
BONDMHDN_01244 7.06e-102 yveB - - I - - - PAP2 superfamily
BONDMHDN_01245 0.0 pepN 3.4.11.2 - E ko:K01256 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 aminopeptidase
BONDMHDN_01246 2.2e-79 lysM - - M - - - LysM domain
BONDMHDN_01247 0.0 - - - L - - - Transposase
BONDMHDN_01248 4.92e-43 - - - L - - - Transposase DDE domain
BONDMHDN_01249 0.0 dtpT - - U ko:K03305 - ko00000 amino acid peptide transporter
BONDMHDN_01250 3.77e-122 - - - S - - - SNARE associated Golgi protein
BONDMHDN_01251 0.0 mycA 4.2.1.53 - S ko:K10254 - ko00000,ko01000 Myosin-crossreactive antigen
BONDMHDN_01252 9.29e-220 rluD2 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
BONDMHDN_01253 1.91e-195 nadK 2.7.1.23 - F ko:K00858 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BONDMHDN_01254 1.7e-147 yjbM 2.7.6.5 - S ko:K07816 ko00230,map00230 ko00000,ko00001,ko01000 RelA SpoT domain protein
BONDMHDN_01255 1.71e-143 - - - S - - - CYTH
BONDMHDN_01256 5.74e-148 yjbH - - Q - - - Thioredoxin
BONDMHDN_01257 6.73e-208 coiA - - S ko:K06198 - ko00000 Competence protein
BONDMHDN_01258 1.5e-178 mecA - - NOT ko:K16511 - ko00000 Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
BONDMHDN_01259 4.25e-85 spxA - - K ko:K16509 - ko00000 Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
BONDMHDN_01260 0.0 ptsI 2.7.3.9 - G ko:K08483 ko02060,map02060 ko00000,ko00001,ko01000,ko02000 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BONDMHDN_01261 1.29e-54 ptsH - - G ko:K11189 - ko00000,ko02000 phosphocarrier protein HPR
BONDMHDN_01262 2.6e-37 - - - - - - - -
BONDMHDN_01263 0.0 clpE - - O ko:K03697 - ko00000,ko03110 Belongs to the ClpA ClpB family
BONDMHDN_01264 8.42e-60 XK27_09445 - - S - - - Domain of unknown function (DUF1827)
BONDMHDN_01265 0.0 prfC - - J ko:K02837 - ko00000,ko03012 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
BONDMHDN_01266 1.45e-180 hlyX - - S ko:K03699 - ko00000,ko02042 Transporter associated domain
BONDMHDN_01267 7.76e-98 - - - - - - - -
BONDMHDN_01268 1.74e-111 - - - - - - - -
BONDMHDN_01269 7.99e-185 recX - - S ko:K03565 - ko00000,ko03400 Regulatory protein RecX
BONDMHDN_01270 0.0 rumA_1 2.1.1.190, 2.1.1.35 - J ko:K00557,ko:K03215 - ko00000,ko01000,ko03009,ko03016 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BONDMHDN_01271 1.15e-155 ybcH - - D ko:K06889 - ko00000 Alpha beta
BONDMHDN_01272 1.04e-48 ybcH - - D ko:K06889 - ko00000 Alpha beta
BONDMHDN_01273 7.74e-61 - - - - - - - -
BONDMHDN_01274 1.29e-190 - - - P ko:K02042 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
BONDMHDN_01275 4.7e-169 phnB - - P ko:K02042 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
BONDMHDN_01276 6.34e-180 phnC 3.6.3.28 - P ko:K02041 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
BONDMHDN_01277 1.57e-208 phnD - - P ko:K02044 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphonate ABC transporter
BONDMHDN_01279 3.92e-110 usp5 - - T - - - universal stress protein
BONDMHDN_01280 1.02e-190 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
BONDMHDN_01281 6.51e-114 - 2.7.1.200, 2.7.1.204 - G ko:K02773,ko:K20112 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BONDMHDN_01282 4.83e-117 ntd 2.4.2.6 - F ko:K08728 ko00240,map00240 ko00000,ko00001,ko01000 Nucleoside
BONDMHDN_01284 3.47e-19 - - - - ko:K07473 - ko00000,ko02048 -
BONDMHDN_01285 1.03e-275 nagA 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Belongs to the metallo-dependent hydrolases superfamily. NagA family
BONDMHDN_01286 0.0 - - - G - - - Belongs to the glycosyl hydrolase 31 family
BONDMHDN_01287 1.2e-202 - - - I - - - alpha/beta hydrolase fold
BONDMHDN_01288 7.8e-167 yibF - - S - - - overlaps another CDS with the same product name
BONDMHDN_01289 1.69e-258 yibE - - S - - - overlaps another CDS with the same product name
BONDMHDN_01290 3.47e-164 - - - - - - - -
BONDMHDN_01291 2.43e-263 ddl 6.3.2.4 - F ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Belongs to the D-alanine--D-alanine ligase family
BONDMHDN_01292 7.36e-291 - - - S - - - Cysteine-rich secretory protein family
BONDMHDN_01293 7.26e-136 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
BONDMHDN_01294 6.39e-21 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
BONDMHDN_01295 7.21e-140 glnPH2 - - P ko:K02029,ko:K02030 - ko00000,ko00002,ko02000 ABC transporter permease
BONDMHDN_01296 1.21e-40 - - - - - - - -
BONDMHDN_01297 1.05e-54 - - - S - - - Protein of unknown function (DUF2922)
BONDMHDN_01298 6.77e-139 - - - S - - - SLAP domain
BONDMHDN_01299 6.35e-28 - - - S - - - PD-(D/E)XK nuclease family transposase
BONDMHDN_01300 4.56e-191 - - - S - - - PD-(D/E)XK nuclease family transposase
BONDMHDN_01302 2.45e-65 - - - K - - - DNA-templated transcription, initiation
BONDMHDN_01303 2.85e-54 - - - - - - - -
BONDMHDN_01305 7.39e-165 - - - S - - - SLAP domain
BONDMHDN_01307 2.09e-286 - - - NU - - - Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
BONDMHDN_01308 7.32e-232 - 3.2.1.96, 3.5.1.28 GH73 M ko:K01227,ko:K01447,ko:K13714,ko:K13731 ko00511,ko05100,map00511,map05100 ko00000,ko00001,ko01000 N-acetylmuramoyl-L-alanine amidase
BONDMHDN_01309 0.0 yjbQ - - P ko:K03455,ko:K03499 - ko00000,ko02000 TrkA C-terminal domain protein
BONDMHDN_01310 2.47e-138 pcp 3.4.19.3 - O ko:K01304 - ko00000,ko01000,ko01002 Removes 5-oxoproline from various penultimate amino acid residues except L-proline
BONDMHDN_01311 1.68e-207 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
BONDMHDN_01312 1.98e-168 - - - - - - - -
BONDMHDN_01313 1.72e-149 - - - - - - - -
BONDMHDN_01314 4.51e-171 gpmA 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BONDMHDN_01315 1.71e-128 - - - M - - - Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
BONDMHDN_01316 3.82e-149 tnpA1 - - L - - - PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BONDMHDN_01317 3.62e-264 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
BONDMHDN_01318 5.18e-135 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
BONDMHDN_01319 4.4e-226 ydbI - - K - - - AI-2E family transporter
BONDMHDN_01320 3.93e-134 - - - E - - - GDSL-like Lipase/Acylhydrolase
BONDMHDN_01321 2.55e-26 - - - - - - - -
BONDMHDN_01322 1.59e-315 - - - G ko:K16211 - ko00000,ko02000 Major Facilitator
BONDMHDN_01323 8.64e-176 XK27_08845 - - S ko:K05833 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
BONDMHDN_01324 4.76e-168 XK27_08840 - - U ko:K05832 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
BONDMHDN_01325 9.61e-223 ABC-SBP - - S ko:K01989 - ko00000,ko00002,ko02000 ABC transporter
BONDMHDN_01326 7.75e-170 ysaA 3.1.3.5, 3.8.1.2 - S ko:K01560,ko:K07025,ko:K08723 ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
BONDMHDN_01327 7.2e-202 - - - P ko:K03284 - ko00000,ko02000 CorA-like Mg2+ transporter protein
BONDMHDN_01328 9.52e-205 yvgN - - C - - - Aldo keto reductase
BONDMHDN_01329 0.0 fusA1 - - J - - - elongation factor G
BONDMHDN_01330 3.16e-192 - 3.1.3.102, 3.1.3.104 - S ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 haloacid dehalogenase-like hydrolase
BONDMHDN_01331 1.07e-179 - - - EGP - - - Major Facilitator Superfamily
BONDMHDN_01332 9.62e-247 ldhA 1.1.1.28 - C ko:K03778,ko:K18347 ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020 ko00000,ko00001,ko00002,ko01000,ko01504 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BONDMHDN_01333 5.61e-138 tag 3.2.2.20 - L ko:K01246 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 glycosylase
BONDMHDN_01334 2.47e-107 - - - - - - - -
BONDMHDN_01335 0.0 - - - S - - - Calcineurin-like phosphoesterase
BONDMHDN_01336 0.0 asnB 6.3.5.4 - E ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 ko00000,ko00001,ko01000,ko01002 Asparagine synthase
BONDMHDN_01337 0.0 yxbA 6.3.1.12 - S ko:K17810 - ko00000,ko01000 ATP-grasp enzyme
BONDMHDN_01338 0.0 nrdD 1.1.98.6 - F ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Ribonucleoside-triphosphate reductase
BONDMHDN_01339 1.35e-180 nrdG 1.97.1.4 - O ko:K04068 - ko00000,ko01000 Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BONDMHDN_01340 3.41e-132 yitW - - S - - - Iron-sulfur cluster assembly protein
BONDMHDN_01341 2.19e-292 XK27_04775 - - S ko:K09155 - ko00000 PAS domain
BONDMHDN_01342 2.31e-277 yqjV - - EGP - - - Major Facilitator Superfamily
BONDMHDN_01343 0.0 pepO - - O ko:K07386 - ko00000,ko01000,ko01002 Peptidase family M13
BONDMHDN_01344 0.0 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
BONDMHDN_01345 6.55e-97 - - - - - - - -
BONDMHDN_01346 3.47e-05 - - - S - - - PFAM Archaeal ATPase
BONDMHDN_01347 0.0 - - - C - - - FMN_bind
BONDMHDN_01348 3.53e-287 - - - P ko:K03319 - ko00000 Sodium:sulfate symporter transmembrane region
BONDMHDN_01349 2.52e-140 - - - K - - - LysR family
BONDMHDN_01350 0.0 - - - C - - - FMN_bind
BONDMHDN_01351 4.07e-140 - - - K - - - LysR family
BONDMHDN_01352 1.18e-89 - - - S - - - PD-(D/E)XK nuclease family transposase
BONDMHDN_01353 2.28e-21 - - - S - - - PD-(D/E)XK nuclease family transposase
BONDMHDN_01354 1.22e-157 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
BONDMHDN_01355 4.92e-73 dhaM 2.7.1.121 - S ko:K05881 ko00561,map00561 ko00000,ko00001,ko01000,ko02000 PTS system fructose IIA component
BONDMHDN_01356 1.39e-120 dhaL 2.7.1.121 - S ko:K05879 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Dak2
BONDMHDN_01357 2.55e-223 dhaK 2.7.1.121 - G ko:K05878 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Dak1 domain
BONDMHDN_01358 0.0 prtB 3.4.21.96 - O ko:K01361 - ko00000,ko01000,ko01002,ko03110 Belongs to the peptidase S8 family
BONDMHDN_01359 2.43e-93 coaA 2.7.1.33 - F ko:K00867 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Pantothenic acid kinase
BONDMHDN_01360 0.0 ydgH - - S ko:K06994 - ko00000 MMPL family
BONDMHDN_01361 3.76e-128 yobS - - K - - - Bacterial regulatory proteins, tetR family
BONDMHDN_01362 2.68e-205 - 3.5.2.6 - V ko:K17836 ko00311,ko01130,ko01501,map00311,map01130,map01501 ko00000,ko00001,ko00002,ko01000,ko01504 Beta-lactamase enzyme family
BONDMHDN_01363 1.4e-207 corA - - P ko:K03284 - ko00000,ko02000 CorA-like Mg2+ transporter protein
BONDMHDN_01364 6.07e-310 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
BONDMHDN_01365 0.0 - - - S - - - Zn-dependent metallo-hydrolase RNA specificity domain
BONDMHDN_01366 5.62e-187 - - - P ko:K02026 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
BONDMHDN_01367 3.85e-201 - - - P ko:K02025 - ko00000,ko00002,ko02000 ABC-type sugar transport systems, permease components
BONDMHDN_01368 3.7e-259 malK - - P ko:K10112,ko:K17240 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ATPases associated with a variety of cellular activities
BONDMHDN_01369 0.0 pepD1 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
BONDMHDN_01370 7.24e-204 endA - - F ko:K15051 - ko00000 DNA RNA non-specific endonuclease
BONDMHDN_01371 2.22e-231 - 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 EXOIII
BONDMHDN_01372 5.96e-202 - - - K - - - NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BONDMHDN_01373 2.23e-150 yviA - - S - - - Protein of unknown function (DUF421)
BONDMHDN_01374 2.94e-74 - - - S - - - Protein of unknown function (DUF3290)
BONDMHDN_01375 9e-255 sigA - - K ko:K03086 - ko00000,ko03021 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
BONDMHDN_01376 0.0 dnaG - - L ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
BONDMHDN_01377 0.0 glyS 6.1.1.14 - J ko:K01879 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Glycyl-tRNA synthetase beta subunit
BONDMHDN_01378 9.03e-229 glyQ 6.1.1.14 - J ko:K01878 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 glycyl-tRNA synthetase alpha subunit
BONDMHDN_01379 4.11e-173 recO - - L ko:K03584 ko03440,map03440 ko00000,ko00001,ko03400 Involved in DNA repair and RecF pathway recombination
BONDMHDN_01380 1.37e-216 era - - S ko:K03595 - ko00000,ko03009,ko03029 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BONDMHDN_01381 3.58e-129 ybeY - - S ko:K07042 - ko00000,ko03009 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
BONDMHDN_01382 3.51e-224 phoH - - T ko:K06217 - ko00000 phosphate starvation-inducible protein PhoH
BONDMHDN_01383 1.08e-92 yqeY - - S ko:K09117 - ko00000 YqeY-like protein
BONDMHDN_01384 4.83e-30 rpsU - - J ko:K02970 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bS21 family
BONDMHDN_01385 6.94e-199 yqfL 2.7.11.33, 2.7.4.28 - F ko:K09773 - ko00000,ko01000 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
BONDMHDN_01386 1.34e-22 - - - S - - - CRISPR-associated protein (Cas_Csn2)
BONDMHDN_01387 1.16e-284 B4168_4126 - - L ko:K07493 - ko00000 Transposase
BONDMHDN_01388 9.07e-51 - - - S - - - CRISPR-associated protein (Cas_Csn2)
BONDMHDN_01389 1.39e-53 cas2 - - L ko:K09951 - ko00000,ko02048 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BONDMHDN_01390 1.44e-164 cas1 - - L ko:K15342 - ko00000,ko02048,ko03400 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BONDMHDN_01391 1.92e-212 cas9 - - L ko:K09952 - ko00000,ko01000,ko02048 CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
BONDMHDN_01392 2.06e-92 XK27_05225 - - S - - - Tetratricopeptide repeat protein
BONDMHDN_01393 8.21e-57 hup - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
BONDMHDN_01394 1.34e-314 der - - S ko:K03977 - ko00000,ko03009 GTPase that plays an essential role in the late steps of ribosome biogenesis
BONDMHDN_01395 1.4e-281 rpsA - - J ko:K02945 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein S1
BONDMHDN_01396 1.96e-148 cmk 2.7.4.25 - F ko:K00945 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the cytidylate kinase family. Type 1 subfamily
BONDMHDN_01397 1.13e-41 - - - M - - - Lysin motif
BONDMHDN_01398 8.49e-146 ribU - - U - - - Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
BONDMHDN_01399 4.65e-168 rluB 5.4.99.22 - J ko:K06178 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
BONDMHDN_01400 7.57e-135 scpB - - D ko:K06024 - ko00000,ko03036 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
BONDMHDN_01401 1.81e-169 scpA - - D ko:K05896 - ko00000,ko03036 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
BONDMHDN_01402 7.97e-82 ribT - - K ko:K02859 - ko00000 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
BONDMHDN_01403 6.74e-213 xerD - - D ko:K04763 - ko00000,ko03036 recombinase XerD
BONDMHDN_01404 1.21e-213 yitL - - S ko:K00243 - ko00000 S1 domain
BONDMHDN_01405 0.0 pyk 2.7.1.40 - G ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the pyruvate kinase family
BONDMHDN_01406 5.46e-233 pfkA 2.7.1.11 - F ko:K00850 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230 ko00000,ko00001,ko00002,ko01000,ko01009,ko03019 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
BONDMHDN_01407 0.0 dnaE 2.7.7.7 - L ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase
BONDMHDN_01408 1.25e-38 - - - S - - - Protein of unknown function (DUF2929)
BONDMHDN_01409 0.0 yfkN 3.1.3.6, 3.1.4.16 - F ko:K01119 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the 5'-nucleotidase family
BONDMHDN_01410 4.97e-102 - - - S - - - N-acetylmuramoyl-L-alanine amidase activity
BONDMHDN_01411 5.77e-39 - - - S - - - Bacteriophage holin of superfamily 6 (Holin_LLH)
BONDMHDN_01420 7.82e-158 - - - S - - - Phage minor structural protein
BONDMHDN_01422 2.31e-134 - - - L - - - Phage tail tape measure protein TP901
BONDMHDN_01430 8.25e-69 - - - S - - - Phage capsid family
BONDMHDN_01431 1.59e-110 - 3.4.21.92 - OU ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S14 family
BONDMHDN_01432 4.25e-167 - - - S - - - Phage portal protein
BONDMHDN_01434 2.37e-263 - - - S - - - Phage Terminase
BONDMHDN_01436 1.71e-72 - - - S - - - Phage terminase, small subunit
BONDMHDN_01440 3.85e-49 - - - S - - - VRR_NUC
BONDMHDN_01451 0.0 - - - S ko:K06919 - ko00000 Phage plasmid primase, P4
BONDMHDN_01452 1e-23 - - - S - - - Protein of unknown function (DUF669)
BONDMHDN_01453 4.6e-184 - - - L - - - Helicase C-terminal domain protein
BONDMHDN_01455 9.54e-88 - - - S - - - AAA domain
BONDMHDN_01456 8.93e-33 - - - S - - - HNH endonuclease
BONDMHDN_01463 2.87e-93 - - - K ko:K07741 - ko00000 AntA/AntB antirepressor
BONDMHDN_01464 1.7e-23 - - - - - - - -
BONDMHDN_01467 1.8e-20 - - - K - - - Helix-turn-helix XRE-family like proteins
BONDMHDN_01469 2.99e-31 - - - S - - - Hypothetical protein (DUF2513)
BONDMHDN_01472 1.56e-166 - - - L - - - Belongs to the 'phage' integrase family
BONDMHDN_01473 5.14e-38 rpmF - - J ko:K02911 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bL32 family
BONDMHDN_01474 3.57e-47 - - - S - - - Lipopolysaccharide assembly protein A domain
BONDMHDN_01475 3.65e-180 - - - S ko:K07124 - ko00000 Belongs to the short-chain dehydrogenases reductases (SDR) family
BONDMHDN_01476 6.82e-223 rnz 3.1.26.11 - J ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
BONDMHDN_01477 0.0 oatA - - I - - - Acyltransferase
BONDMHDN_01478 1.88e-309 obg - - S ko:K03979 - ko00000,ko01000,ko03009 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BONDMHDN_01479 0.0 uvrC - - L ko:K03703 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
BONDMHDN_01480 1.58e-140 yngC - - S - - - SNARE associated Golgi protein
BONDMHDN_01481 0.0 yhdG - - E ko:K03294 - ko00000 Amino Acid
BONDMHDN_01482 6.61e-230 gyaR 1.1.1.26, 1.1.1.399, 1.1.1.95 - CH ko:K00015,ko:K00058 ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BONDMHDN_01483 4.63e-32 - - - - - - - -
BONDMHDN_01484 6.72e-177 - - - EP - - - Plasmid replication protein
BONDMHDN_01485 8.28e-102 - - - S - - - helix_turn_helix, Deoxyribose operon repressor
BONDMHDN_01486 6.33e-221 ulaG - - S ko:K03476 ko00053,ko01100,ko01120,map00053,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Beta-lactamase superfamily domain
BONDMHDN_01487 4.93e-80 - 2.7.1.194 - G ko:K02821 ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BONDMHDN_01488 2.8e-294 sgaT - - S ko:K03475 ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko02000 PTS system sugar-specific permease component
BONDMHDN_01489 4.82e-42 ulaB 2.7.1.194 - G ko:K02822 ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
BONDMHDN_01490 2.85e-115 ulaD 4.1.1.85, 4.1.2.43 - G ko:K03078,ko:K08093 ko00030,ko00040,ko00053,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00040,map00053,map00680,map01100,map01120,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Orotidine 5'-phosphate decarboxylase / HUMPS family
BONDMHDN_01491 1.78e-163 sga 5.1.3.22 - G ko:K03079 ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Xylose isomerase-like TIM barrel
BONDMHDN_01492 1.52e-157 araD 5.1.3.4 - G ko:K03077 ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120 ko00000,ko00001,ko00002,ko01000 links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
BONDMHDN_01493 5.85e-86 nt5e 3.1.3.18 - L ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 ko00000,ko00001,ko01000 haloacid dehalogenase-like hydrolase
BONDMHDN_01494 0.0 xfp 4.1.2.22, 4.1.2.9 - G ko:K01621 ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120 ko00000,ko00001,ko01000 Phosphoketolase
BONDMHDN_01495 9.78e-216 xfp 4.1.2.22, 4.1.2.9 - G ko:K01621 ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120 ko00000,ko00001,ko01000 Phosphoketolase
BONDMHDN_01496 1.01e-22 - - - L - - - Transposase
BONDMHDN_01497 7.51e-16 - - - L - - - Transposase
BONDMHDN_01498 1.21e-72 - - - K - - - Acetyltransferase (GNAT) domain
BONDMHDN_01500 4.4e-86 - - - K - - - LytTr DNA-binding domain
BONDMHDN_01501 6.11e-66 - - - S - - - Protein of unknown function (DUF3021)
BONDMHDN_01502 4.57e-135 - 3.5.1.124 - S ko:K03152 - ko00000,ko01000,ko01002 DJ-1/PfpI family
BONDMHDN_01503 1.1e-152 - 3.8.1.2 - S ko:K01560 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
BONDMHDN_01504 1.64e-99 - - - S ko:K07090 - ko00000 membrane transporter protein
BONDMHDN_01505 6.89e-190 glvR - - K ko:K03481 - ko00000,ko03000 Helix-turn-helix domain, rpiR family
BONDMHDN_01506 1.52e-103 - - - - - - - -
BONDMHDN_01507 1.96e-113 ptbA 2.7.1.208 - G ko:K02755,ko:K02777,ko:K20107,ko:K20108 ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111 ko00000,ko00001,ko00002,ko01000,ko02000 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
BONDMHDN_01508 1.76e-52 - - - - - - - -
BONDMHDN_01509 2.14e-154 - - - C - - - nitroreductase
BONDMHDN_01510 0.0 yhdP - - S - - - Transporter associated domain
BONDMHDN_01511 8.59e-133 hpt 2.4.2.8 - F ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the purine pyrimidine phosphoribosyltransferase family
BONDMHDN_01512 0.0 - 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
BONDMHDN_01513 1.66e-112 - - - L - - - PFAM transposase, IS4 family protein
BONDMHDN_01514 5.83e-67 - - - L - - - PFAM transposase, IS4 family protein
BONDMHDN_01515 0.0 - 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
BONDMHDN_01516 1.29e-295 - - - E ko:K03294 - ko00000 amino acid
BONDMHDN_01517 2.13e-167 lys - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
BONDMHDN_01518 5.96e-283 yfmL - - L - - - DEAD DEAH box helicase
BONDMHDN_01519 1.97e-315 chbC - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BONDMHDN_01521 4.65e-278 mnaA 5.1.3.14 - G ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 ko00000,ko00001,ko00002,ko01000,ko01005 Belongs to the UDP-N-acetylglucosamine 2-epimerase family
BONDMHDN_01522 7.07e-126 - - - L - - - PFAM Integrase catalytic
BONDMHDN_01523 6.08e-148 eriC - - P ko:K03281 - ko00000 chloride
BONDMHDN_01524 6.55e-76 eriC - - P ko:K03281 - ko00000 chloride
BONDMHDN_01525 1.45e-34 - - - K - - - FCD
BONDMHDN_01526 1.43e-19 - - - K - - - FCD
BONDMHDN_01527 4.37e-132 - - - GM - - - NmrA-like family
BONDMHDN_01528 5.5e-154 pyrE 2.4.2.10 - F ko:K00762 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BONDMHDN_01529 6.35e-164 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
BONDMHDN_01530 1.52e-212 pyrD 1.3.1.14, 1.3.98.1 - F ko:K00226,ko:K17828 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
BONDMHDN_01531 1.01e-122 pyrR 2.4.2.9 - F ko:K02825 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000,ko03000 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
BONDMHDN_01532 9.05e-231 pyrB 2.1.3.2 - F ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
BONDMHDN_01533 6.83e-312 pyrC 3.5.2.3 - F ko:K01465 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
BONDMHDN_01534 3.47e-268 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase glutamine chain
BONDMHDN_01535 0.0 carB 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase
BONDMHDN_01536 0.0 lctP - - C ko:K03303 - ko00000,ko02000 L-lactate permease
BONDMHDN_01537 4.34e-174 glnPH2 - - P ko:K02029,ko:K02030 - ko00000,ko00002,ko02000 ABC transporter permease
BONDMHDN_01538 2.62e-176 - - - - - - - -
BONDMHDN_01539 8.37e-161 - - - K - - - Bacterial regulatory proteins, tetR family
BONDMHDN_01540 1.45e-232 prs2 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BONDMHDN_01541 5.46e-181 noxC 1.5.1.39 - C ko:K19286 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 coenzyme F420-1:gamma-L-glutamate ligase activity
BONDMHDN_01542 2.15e-253 - - - EGP - - - Major Facilitator Superfamily
BONDMHDN_01544 2.7e-79 - - - - - - - -
BONDMHDN_01546 5.02e-190 - - - K - - - Helix-turn-helix domain
BONDMHDN_01547 4.69e-158 - - - S - - - Alpha/beta hydrolase family
BONDMHDN_01548 2.62e-199 epsV - - S - - - glycosyl transferase family 2
BONDMHDN_01549 7.53e-186 - - - S - - - Protein of unknown function (DUF1002)
BONDMHDN_01550 2.94e-189 rnhA 3.1.26.4 - L ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BONDMHDN_01551 6.14e-233 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
BONDMHDN_01552 0.0 cls - - I ko:K06131 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BONDMHDN_01553 2.29e-112 - - - - - - - -
BONDMHDN_01554 1.23e-166 - - - S - - - (CBS) domain
BONDMHDN_01555 2.93e-234 ldh 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily. LDH family
BONDMHDN_01556 1.89e-134 pth 3.1.1.29 - J ko:K01056 - ko00000,ko01000,ko03012 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
BONDMHDN_01557 0.0 mfd - - L ko:K03723 ko03420,map03420 ko00000,ko00001,ko01000,ko03400 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BONDMHDN_01558 7.32e-46 yabO - - J - - - S4 domain protein
BONDMHDN_01559 7.52e-78 divIC - - D ko:K13052 - ko00000,ko03036 Septum formation initiator
BONDMHDN_01560 1.61e-81 - - - J ko:K07571 - ko00000 S1 RNA binding domain
BONDMHDN_01561 3.35e-308 tilS 2.4.2.8, 6.3.4.19 - J ko:K04075,ko:K15780 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000,ko03016 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
BONDMHDN_01562 0.0 ftsH - - O ko:K03798 - ko00000,ko00002,ko01000,ko01002,ko03110 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BONDMHDN_01563 3.91e-214 hslO - - O ko:K04083 - ko00000,ko03110 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
BONDMHDN_01564 6.51e-247 dus - - J ko:K05540 - ko00000,ko01000,ko03016 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BONDMHDN_01565 0.0 lysS 6.1.1.6 - J ko:K04567 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family
BONDMHDN_01566 5.55e-80 - - - L ko:K07497 - ko00000 COG2963 Transposase and inactivated derivatives
BONDMHDN_01583 6.35e-90 - - - L - - - Belongs to the 'phage' integrase family
BONDMHDN_01584 2.14e-45 - - - V - - - Abi-like protein
BONDMHDN_01587 5.63e-57 - - - K - - - Peptidase S24-like
BONDMHDN_01588 8.39e-07 - - - K - - - Helix-turn-helix XRE-family like proteins
BONDMHDN_01589 3.28e-144 - - - K ko:K07741 - ko00000 BRO family, N-terminal domain
BONDMHDN_01595 3.84e-81 - - - S - - - ERF superfamily
BONDMHDN_01596 1.95e-71 - - - S - - - calcium ion binding
BONDMHDN_01597 5.39e-106 - - - L ko:K02315 - ko00000,ko03032 IstB-like ATP binding protein
BONDMHDN_01611 7.1e-106 rlmH 2.1.1.177 - J ko:K00783 - ko00000,ko01000,ko03009 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
BONDMHDN_01612 3.17e-224 htrA 3.4.21.107 - O ko:K04771 ko01503,ko02020,map01503,map02020 ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 serine protease
BONDMHDN_01613 1.19e-188 vicX 3.1.26.11 - S ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 domain protein
BONDMHDN_01614 7.44e-192 yycI - - S - - - YycH protein
BONDMHDN_01615 0.0 yycH - - S - - - YycH protein
BONDMHDN_01616 0.0 vicK 2.7.13.3 - T ko:K07652 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
BONDMHDN_01617 3.98e-169 yycF - - K ko:K07668 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 response regulator
BONDMHDN_01619 1.09e-46 - - - - - - - -
BONDMHDN_01621 4.19e-192 - - - I - - - Acyl-transferase
BONDMHDN_01622 7.23e-201 arbx - - M - - - Glycosyl transferase family 8
BONDMHDN_01623 1.91e-236 - - - M - - - Glycosyl transferase family 8
BONDMHDN_01624 5.48e-235 - - - M - - - Glycosyl transferase family 8
BONDMHDN_01625 3.92e-215 arbZ - - I - - - Phosphate acyltransferases
BONDMHDN_01626 6.8e-50 - - - S - - - Cytochrome B5
BONDMHDN_01627 1.39e-312 lysA 4.1.1.20 - E ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
BONDMHDN_01628 0.0 lysC 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the aspartokinase family
BONDMHDN_01629 6.25e-246 dapF 5.1.1.7 - E ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
BONDMHDN_01630 1.27e-220 potE - - E - - - Amino Acid
BONDMHDN_01631 2.58e-48 potE - - E - - - Amino Acid
BONDMHDN_01632 1.59e-136 engB - - D ko:K03978 - ko00000,ko03036 Necessary for normal cell division and for the maintenance of normal septation
BONDMHDN_01633 3.04e-297 clpX - - O ko:K03544 ko04112,map04112 ko00000,ko00001,ko03110 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
BONDMHDN_01634 1.09e-292 tig - - D ko:K03545 - ko00000 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
BONDMHDN_01635 5.76e-287 tuf - - J ko:K02358,ko:K15771 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BONDMHDN_01636 9e-190 - - - - - - - -
BONDMHDN_01637 0.0 rnjB - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BONDMHDN_01638 7.11e-57 rpsO - - J ko:K02956 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BONDMHDN_01639 3.64e-46 rpsT - - J ko:K02968 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 16S ribosomal RNA
BONDMHDN_01640 3.61e-85 - - - L - - - DDE superfamily endonuclease
BONDMHDN_01641 0.0 pepF - - E ko:K08602 - ko00000,ko01000,ko01002 oligoendopeptidase F
BONDMHDN_01642 8.61e-54 - - - S - - - Enterocin A Immunity
BONDMHDN_01643 1.71e-172 - - - S ko:K07052 - ko00000 CAAX amino terminal protease
BONDMHDN_01647 6.21e-60 - - - V ko:K20345 ko02024,map02024 ko00000,ko00001,ko02000 HlyD family secretion protein
BONDMHDN_01648 0.0 comA - - V ko:K06147,ko:K06148,ko:K12292,ko:K20344 ko02010,ko02020,ko02024,map02010,map02020,map02024 ko00000,ko00001,ko01000,ko02000 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
BONDMHDN_01649 1.64e-101 - - - K ko:K07707 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko02022 LytTr DNA-binding domain
BONDMHDN_01650 1.72e-97 - 2.7.13.3 - T ko:K07706 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 GHKL domain
BONDMHDN_01653 2.02e-35 - - - K ko:K07729 - ko00000,ko03000 Helix-turn-helix XRE-family like proteins
BONDMHDN_01654 9.66e-12 - - - - - - - -
BONDMHDN_01655 2.29e-274 metE 2.1.1.14 - E ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 methionine synthase, vitamin-B12 independent
BONDMHDN_01656 3.98e-116 luxS 4.4.1.21 - H ko:K07173 ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111 ko00000,ko00001,ko00002,ko01000 Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
BONDMHDN_01658 5.02e-189 peb1A - - ET ko:K10039 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
BONDMHDN_01659 2.62e-166 - - - F - - - glutamine amidotransferase
BONDMHDN_01660 9.76e-312 steT - - E ko:K03294 - ko00000 amino acid
BONDMHDN_01661 1.8e-305 steT - - E ko:K03294 - ko00000 amino acid
BONDMHDN_01662 6.41e-194 - - - - - - - -
BONDMHDN_01663 6.07e-223 ydhF - - S - - - Aldo keto reductase
BONDMHDN_01664 0.0 ykpA - - S - - - ABC transporter, ATP-binding protein
BONDMHDN_01665 4.37e-266 pepA - - E - - - M42 glutamyl aminopeptidase
BONDMHDN_01666 7.33e-59 - - - - - - - -
BONDMHDN_01667 5.43e-172 - - - - - - - -
BONDMHDN_01668 6.86e-276 pmrA - - EGP ko:K08161 - ko00000,ko02000 MFS_1 like family
BONDMHDN_01669 0.0 qacA - - EGP - - - Major Facilitator
BONDMHDN_01670 0.0 - - - S - - - Fibronectin type III domain
BONDMHDN_01671 7.03e-307 tyrS 6.1.1.1 - J ko:K01866 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BONDMHDN_01672 9.39e-71 - - - - - - - -
BONDMHDN_01674 0.0 pepC2 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 aminopeptidase
BONDMHDN_01675 1.77e-157 ypgQ - - S ko:K06950 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
BONDMHDN_01676 0.0 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
BONDMHDN_01677 0.0 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
BONDMHDN_01678 0.0 - - - L - - - Transposase DDE domain
BONDMHDN_01679 2.64e-266 guaB 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
BONDMHDN_01680 5.46e-191 oppB - - P ko:K15581 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC-type dipeptide oligopeptide nickel transport systems, permease components
BONDMHDN_01681 7.82e-240 oppC - - EP ko:K15582 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC-type dipeptide oligopeptide nickel transport systems, permease components
BONDMHDN_01682 7.1e-252 oppD - - P ko:K02031,ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
BONDMHDN_01683 1.8e-190 oppF - - P ko:K10823 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
BONDMHDN_01684 0.0 pepE 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 aminopeptidase
BONDMHDN_01685 8.35e-94 hsp - - O ko:K13993 ko04141,map04141 ko00000,ko00001,ko03110 Belongs to the small heat shock protein (HSP20) family
BONDMHDN_01686 5.69e-100 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
BONDMHDN_01687 1.67e-143 - - - - - - - -
BONDMHDN_01689 1.66e-143 - - - E - - - Belongs to the SOS response-associated peptidase family
BONDMHDN_01690 4.07e-245 trpS 6.1.1.2 - J ko:K01867 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
BONDMHDN_01691 1.5e-116 comEB 3.5.4.12 - F ko:K01493 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko02044 MafB19-like deaminase
BONDMHDN_01692 4.57e-135 - - - S ko:K06872 - ko00000 TPM domain
BONDMHDN_01693 4.37e-173 mgtA 3.6.3.2 - P ko:K01531 - ko00000,ko01000 COG0474 Cation transport ATPase
BONDMHDN_01694 0.0 mgtA 3.6.3.2 - P ko:K01531 - ko00000,ko01000 COG0474 Cation transport ATPase
BONDMHDN_01695 3.02e-49 mgtA 3.6.3.2 - P ko:K01531 - ko00000,ko01000 COG0474 Cation transport ATPase
BONDMHDN_01696 0.0 metG 6.1.1.10 - J ko:K01874 ko00450,ko00970,map00450,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BONDMHDN_01697 1.11e-188 tatD - - L ko:K03424 - ko00000,ko01000 hydrolase, TatD family
BONDMHDN_01698 5.17e-129 rnmV 3.1.26.8 - J ko:K05985 - ko00000,ko01000 Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
BONDMHDN_01699 1.57e-203 ksgA 2.1.1.182 - J ko:K02528 - ko00000,ko01000,ko03009 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
BONDMHDN_01700 1.42e-52 veg - - S - - - Biofilm formation stimulator VEG
BONDMHDN_01701 5.03e-191 purR - - F ko:K09685 - ko00000,ko03000 pur operon repressor
BONDMHDN_01702 5.17e-307 glmU 2.3.1.157, 2.7.7.23 - M ko:K04042 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BONDMHDN_01703 5.52e-113 - - - - - - - -
BONDMHDN_01704 0.0 - - - S - - - SLAP domain
BONDMHDN_01705 5.4e-226 prs 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BONDMHDN_01706 0.0 - 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
BONDMHDN_01707 2.3e-169 yecA - - K - - - Helix-turn-helix domain, rpiR family
BONDMHDN_01708 8.39e-314 ptcC - - U ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BONDMHDN_01709 7.03e-216 - - - GK - - - ROK family
BONDMHDN_01710 3.56e-56 - - - - - - - -
BONDMHDN_01711 0.0 - - - S ko:K06885 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
BONDMHDN_01712 1.75e-89 - - - S - - - Domain of unknown function (DUF1934)
BONDMHDN_01713 2.38e-88 rpoE - - K ko:K03048 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko03021,ko03400 Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
BONDMHDN_01714 0.0 pyrG 6.3.4.2 - F ko:K01937 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
BONDMHDN_01715 6.58e-311 murA 2.5.1.7 - M ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BONDMHDN_01716 4.61e-104 - - - K - - - acetyltransferase
BONDMHDN_01717 1.69e-61 - - - F - - - AAA domain
BONDMHDN_01718 0.0 pepDA - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
BONDMHDN_01719 6.38e-191 msmR - - K - - - AraC-like ligand binding domain
BONDMHDN_01720 8.34e-294 pbuX - - F ko:K03458,ko:K16169 - ko00000,ko02000 xanthine permease
BONDMHDN_01721 9.63e-136 xpt 2.4.2.22 - F ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000 Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
BONDMHDN_01722 6.18e-54 - - - K - - - Helix-turn-helix
BONDMHDN_01723 0.0 guaA 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the synthesis of GMP from XMP
BONDMHDN_01725 1.89e-129 - - - L - - - Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
BONDMHDN_01726 1.91e-24 - - - D - - - GA module
BONDMHDN_01727 1.62e-276 alr 5.1.1.1, 5.1.1.5 - E ko:K01775,ko:K20707 ko00473,ko01100,ko01502,map00473,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BONDMHDN_01728 9.39e-80 acpS 2.7.8.7 - I ko:K00997 ko00770,map00770 ko00000,ko00001,ko01000 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
BONDMHDN_01729 0.0 cshA 3.6.4.13 - F ko:K05592 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
BONDMHDN_01730 0.0 murF 6.3.2.10 - M ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
BONDMHDN_01731 1.07e-52 rpmE - - J ko:K02909 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L31
BONDMHDN_01732 0.0 dexB 3.2.1.70 - G ko:K01215 - ko00000,ko01000 Alpha amylase, catalytic domain protein
BONDMHDN_01733 1.64e-200 yhaX - - S - - - Sucrose-6F-phosphate phosphohydrolase
BONDMHDN_01734 0.0 - - - E - - - amino acid
BONDMHDN_01735 5.66e-297 glyA 2.1.2.1 - E ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BONDMHDN_01736 1.17e-56 - - - - - - - -
BONDMHDN_01737 8.68e-69 - - - - - - - -
BONDMHDN_01738 3.44e-238 - - - C - - - FMN-dependent dehydrogenase
BONDMHDN_01739 9.69e-184 - - - P - - - Voltage gated chloride channel
BONDMHDN_01740 2.65e-197 cinI - - S ko:K06889 - ko00000 Serine hydrolase (FSH1)
BONDMHDN_01741 1.16e-269 - - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
BONDMHDN_01743 3.31e-185 lipA - - I - - - Carboxylesterase family
BONDMHDN_01744 1.82e-86 yusI 1.20.4.1 - P ko:K00537 - ko00000,ko01000 Belongs to the ArsC family
BONDMHDN_01745 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
BONDMHDN_01746 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
BONDMHDN_01747 7.71e-188 supH - - S - - - haloacid dehalogenase-like hydrolase
BONDMHDN_01748 4.3e-66 - - - - - - - -
BONDMHDN_01749 8.51e-50 - - - - - - - -
BONDMHDN_01750 2.1e-82 - - - S - - - Alpha beta hydrolase
BONDMHDN_01751 2.19e-49 - - - S - - - Alpha beta hydrolase
BONDMHDN_01752 0.0 pepX 3.4.14.11 - E ko:K01281 - ko00000,ko01000,ko01002 Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
BONDMHDN_01753 2.88e-105 msrB 1.8.4.12 - O ko:K07305 - ko00000,ko01000 peptide methionine sulfoxide reductase
BONDMHDN_01754 8.74e-62 - - - - - - - -
BONDMHDN_01755 8.94e-308 srrA1 - - G ko:K02027,ko:K17244 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
BONDMHDN_01756 7.29e-209 - - - C - - - Domain of unknown function (DUF4931)
BONDMHDN_01757 8.52e-215 rbsK 2.7.1.15 - H ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BONDMHDN_01758 1.82e-161 rpiA 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
BONDMHDN_01759 0.0 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
BONDMHDN_01760 1.01e-222 rihC 3.2.2.1 - F ko:K01239,ko:K01250,ko:K12700 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 Nucleoside
BONDMHDN_01761 6.63e-174 gntR - - K - - - UbiC transcription regulator-associated domain protein
BONDMHDN_01762 3.18e-198 - 3.1.3.102, 3.1.3.104 - S ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 hydrolase
BONDMHDN_01763 2.9e-79 - - - S - - - Enterocin A Immunity
BONDMHDN_01764 4.44e-174 - - - K ko:K22103 - ko00000,ko03000 DeoR C terminal sensor domain
BONDMHDN_01765 0.0 xfp 4.1.2.22, 4.1.2.9 - G ko:K01621 ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120 ko00000,ko00001,ko01000 Phosphoketolase
BONDMHDN_01766 4.17e-65 - - - S - - - Phospholipase, patatin family
BONDMHDN_01767 2.32e-127 - - - S - - - Domain of unknown function (DUF4767)
BONDMHDN_01768 1.01e-310 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
BONDMHDN_01769 2.81e-193 - - - S - - - Uncharacterised protein, DegV family COG1307
BONDMHDN_01770 1.31e-128 - - - I - - - PAP2 superfamily
BONDMHDN_01771 5e-227 cbh 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
BONDMHDN_01773 4.35e-221 - - - S - - - Conserved hypothetical protein 698
BONDMHDN_01774 1.03e-34 - - - S - - - Pyridoxamine 5'-phosphate oxidase
BONDMHDN_01775 6.34e-40 - - - S - - - Pyridoxamine 5'-phosphate oxidase
BONDMHDN_01776 0.0 cadA 3.6.3.3, 3.6.3.5 - P ko:K01534 - ko00000,ko01000 E1-E2 ATPase
BONDMHDN_01777 4.22e-41 - - - C - - - Heavy-metal-associated domain
BONDMHDN_01778 1.45e-102 dpsB - - P - - - Belongs to the Dps family
BONDMHDN_01779 2.6e-110 fnr - - K ko:K21562 - ko00000,ko03000 Transcriptional regulator, Crp Fnr family
BONDMHDN_01780 1.85e-164 yobV3 - - K - - - WYL domain
BONDMHDN_01781 5.61e-72 - - - S - - - pyridoxamine 5-phosphate
BONDMHDN_01782 5.68e-110 dps - - P ko:K04047 - ko00000,ko03036 Belongs to the Dps family
BONDMHDN_01783 1.43e-33 - - - L ko:K07497 - ko00000 hmm pf00665
BONDMHDN_01784 0.0 thrS 6.1.1.3 - J ko:K01868 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BONDMHDN_01785 3.09e-214 dnaI - - L ko:K11144 - ko00000,ko03032 Primosomal protein DnaI
BONDMHDN_01786 5.62e-316 dnaB2 - - L ko:K03346 - ko00000,ko03032 Replication initiation and membrane attachment
BONDMHDN_01787 3.04e-105 nrdR - - K ko:K07738 - ko00000,ko03000 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BONDMHDN_01788 2.16e-136 coaE 2.7.1.24 - F ko:K00859 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BONDMHDN_01789 2.24e-198 fpg 3.2.2.23, 4.2.99.18 - L ko:K10563 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
BONDMHDN_01790 0.0 polA 2.7.7.7 - L ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 ko00000,ko00001,ko01000,ko03032,ko03400 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BONDMHDN_01791 1.05e-40 - - - - - - - -
BONDMHDN_01792 2.25e-209 msmX - - P ko:K10112 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
BONDMHDN_01793 7.28e-288 B4168_4126 - - L ko:K07493 - ko00000 Transposase
BONDMHDN_01796 4.81e-77 - - - S - - - SIR2-like domain
BONDMHDN_01797 2.08e-118 - 3.1.21.3 - V ko:K01154 - ko00000,ko01000,ko02048 Type I restriction modification DNA specificity domain
BONDMHDN_01798 0.0 hsdM 2.1.1.72 - V ko:K03427 - ko00000,ko01000,ko02048 type I restriction-modification system
BONDMHDN_01799 5.22e-54 - - - S - - - RloB-like protein
BONDMHDN_01800 1.35e-208 - - - S ko:K06926 - ko00000 AAA domain, putative AbiEii toxin, Type IV TA system
BONDMHDN_01801 0.0 hsdR 3.1.21.3 - L ko:K01153 - ko00000,ko01000,ko02048 DEAD/DEAH box helicase
BONDMHDN_01802 0.0 - - - S - - - SLAP domain
BONDMHDN_01804 0.0 snf - - KL - - - domain protein
BONDMHDN_01805 9.39e-141 plsY 2.3.1.15 - I ko:K08591 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
BONDMHDN_01806 0.0 parE - - L ko:K02622 - ko00000,ko01000,ko02048,ko03032,ko03036 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
BONDMHDN_01807 0.0 parC - - L ko:K02621 - ko00000,ko01000,ko02048,ko03032,ko03036 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
BONDMHDN_01808 1.11e-234 - - - K - - - Transcriptional regulator
BONDMHDN_01809 1.05e-221 ppaC 3.6.1.1 - C ko:K15986 ko00190,map00190 ko00000,ko00001,ko01000 inorganic pyrophosphatase
BONDMHDN_01810 1.17e-144 ppiB 5.2.1.8 - G ko:K03768 - ko00000,ko01000,ko03110 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BONDMHDN_01811 5.03e-76 - - - K - - - Helix-turn-helix domain
BONDMHDN_01812 2.34e-241 - - - K ko:K02529 - ko00000,ko03000 Periplasmic binding protein-like domain
BONDMHDN_01813 1.12e-136 - - - K - - - Transcriptional regulator, AbiEi antitoxin
BONDMHDN_01814 1.16e-208 - - - S - - - Nucleotidyl transferase AbiEii toxin, Type IV TA system
BONDMHDN_01815 6.69e-239 galE 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family
BONDMHDN_01816 4.35e-185 lacM 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 beta-galactosidase
BONDMHDN_01817 0.0 lacL 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
BONDMHDN_01818 1.73e-209 lacR - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator
BONDMHDN_01819 0.0 lacS - - G ko:K11104,ko:K16209 - ko00000,ko02000 Transporter
BONDMHDN_01820 0.0 lacZ 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 -beta-galactosidase
BONDMHDN_01821 4.97e-64 - - - S - - - Metal binding domain of Ada
BONDMHDN_01822 0.0 - - - P - - - Cation transporter/ATPase, N-terminus
BONDMHDN_01823 6.12e-177 lysR5 - - K - - - LysR substrate binding domain
BONDMHDN_01824 2.06e-298 arcA 3.5.3.6 - E ko:K01478 ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130 ko00000,ko00001,ko01000 Arginine
BONDMHDN_01825 5.39e-84 argF 2.1.3.3 - E ko:K00611 ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BONDMHDN_01826 4.72e-134 arcC 2.7.2.2 - E ko:K00926 ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200 ko00000,ko00001,ko01000 Belongs to the carbamate kinase family
BONDMHDN_01827 1.76e-122 citX 2.7.7.61 - HI ko:K05964 ko02020,map02020 ko00000,ko00001,ko01000 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
BONDMHDN_01828 1.07e-287 - - - S - - - Sterol carrier protein domain
BONDMHDN_01829 9.97e-08 - - - - - - - -
BONDMHDN_01830 6.93e-140 - - - K - - - LysR substrate binding domain
BONDMHDN_01831 1.13e-126 - - - - - - - -
BONDMHDN_01832 5.04e-154 - - - G - - - Antibiotic biosynthesis monooxygenase
BONDMHDN_01833 5.73e-153 - - - - - - - -
BONDMHDN_01834 1.71e-150 - - - S - - - Peptidase family M23
BONDMHDN_01835 6.57e-141 msrA 1.8.4.11, 1.8.4.12 - O ko:K07304,ko:K12267 - ko00000,ko01000 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BONDMHDN_01836 1.24e-125 - - - M - - - hydrolase, family 25
BONDMHDN_01837 3.09e-22 - - - - - - - -
BONDMHDN_01845 9.43e-300 - - - S - - - Phage minor structural protein
BONDMHDN_01847 6.21e-116 - - - V - - - HNH endonuclease
BONDMHDN_01848 6.36e-173 - - - S - - - PFAM Archaeal ATPase
BONDMHDN_01849 5.27e-314 yifK - - E ko:K03293 - ko00000 Amino acid permease
BONDMHDN_01850 1.05e-309 aapA - - E ko:K03293,ko:K11737 - ko00000,ko02000 Amino acid permease
BONDMHDN_01851 5.08e-149 sipS3 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
BONDMHDN_01852 0.0 clpE - - O ko:K03697,ko:K04086 - ko00000,ko03110 AAA domain (Cdc48 subfamily)
BONDMHDN_01853 7.86e-212 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
BONDMHDN_01854 3.09e-304 pts13C - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BONDMHDN_01855 1.68e-161 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
BONDMHDN_01856 0.0 ylbB - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
BONDMHDN_01857 1.96e-49 - - - - - - - -
BONDMHDN_01858 0.0 ytgP - - S ko:K03328 - ko00000 Polysaccharide biosynthesis protein
BONDMHDN_01859 1.34e-183 lysA2 - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
BONDMHDN_01860 2.5e-172 - - - S - - - Protein of unknown function (DUF975)
BONDMHDN_01861 1.97e-227 pbpX2 - - V - - - Beta-lactamase
BONDMHDN_01862 6.8e-316 dltD - - M ko:K03740 ko01503,ko02020,ko05150,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01504 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
BONDMHDN_01863 4.98e-48 dltC 6.1.1.13 - J ko:K14188 ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01000,ko01504 Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
BONDMHDN_01864 2.95e-304 dltB - - M ko:K03739 ko01503,ko02020,ko05150,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01504 MBOAT, membrane-bound O-acyltransferase family
BONDMHDN_01865 0.0 dltA 6.1.1.13 - H ko:K03367 ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01000,ko01504 Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
BONDMHDN_01866 1.3e-26 - - - S - - - D-Ala-teichoic acid biosynthesis protein
BONDMHDN_01867 1.42e-58 - - - - - - - -
BONDMHDN_01868 5.11e-265 - - - S - - - Membrane
BONDMHDN_01869 3.41e-107 ykuL - - S - - - (CBS) domain
BONDMHDN_01870 0.0 cadA - - P - - - P-type ATPase
BONDMHDN_01871 5.71e-263 napA - - P - - - Sodium/hydrogen exchanger family
BONDMHDN_01872 2.49e-63 - - - D ko:K19159 - ko00000,ko02048 Antitoxin component of a toxin-antitoxin (TA) module
BONDMHDN_01873 1.68e-55 yoeB - - S ko:K19158 - ko00000,ko01000,ko02048 YoeB-like toxin of bacterial type II toxin-antitoxin system
BONDMHDN_01874 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC transporter transmembrane region
BONDMHDN_01875 1.91e-200 mutR - - K - - - Helix-turn-helix XRE-family like proteins
BONDMHDN_01876 1.05e-67 - - - - - - - -
BONDMHDN_01877 3.62e-202 - - - EGP - - - Major facilitator Superfamily
BONDMHDN_01878 1.49e-141 ywdE - - K ko:K20375 ko02024,map02024 ko00000,ko00001,ko03000 Transcriptional regulator
BONDMHDN_01879 3.43e-155 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
BONDMHDN_01880 5.14e-248 - - - S - - - DUF218 domain
BONDMHDN_01881 0.0 - - - V ko:K02003,ko:K02004 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
BONDMHDN_01882 0.0 ppc 4.1.1.31 - H ko:K01595 ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
BONDMHDN_01883 5.9e-130 - - - S - - - ECF transporter, substrate-specific component
BONDMHDN_01884 1.97e-255 tcsA - - S ko:K02058,ko:K07335 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein PnrA-like
BONDMHDN_01885 4.57e-232 tcsA - - S ko:K02058,ko:K07335 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein PnrA-like
BONDMHDN_01886 0.0 mglA 3.6.3.17 - S ko:K02056,ko:K06400 - ko00000,ko00002,ko01000,ko02000 ABC transporter
BONDMHDN_01887 8.8e-262 mglC - - S ko:K02057 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
BONDMHDN_01888 3.63e-221 yufQ - - S ko:K02057 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
BONDMHDN_01889 3.08e-205 - - - S - - - Aldo/keto reductase family
BONDMHDN_01890 1.15e-173 nagB 3.5.99.6 - G ko:K02564 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
BONDMHDN_01891 9.85e-154 dak 2.7.1.76 - F ko:K10353 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000 deoxynucleoside kinase
BONDMHDN_01892 1.06e-159 dgk2 2.7.1.76 - F ko:K10353 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000 deoxynucleoside kinase
BONDMHDN_01893 6.64e-94 - - - - - - - -
BONDMHDN_01894 2.56e-179 - - - S - - - haloacid dehalogenase-like hydrolase
BONDMHDN_01895 9.69e-292 pbuG - - S ko:K06901 - ko00000,ko02000 permease
BONDMHDN_01896 3.85e-97 - - - S ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
BONDMHDN_01897 4.03e-75 - - - S ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
BONDMHDN_01898 8.34e-116 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
BONDMHDN_01899 7.81e-169 - - - S - - - Uncharacterised protein family (UPF0236)
BONDMHDN_01900 2.94e-166 - - - M - - - LPXTG-motif cell wall anchor domain protein
BONDMHDN_01901 4.55e-221 - - - M - - - LPXTG-motif cell wall anchor domain protein
BONDMHDN_01902 5e-53 - - - M - - - LPXTG-motif cell wall anchor domain protein
BONDMHDN_01903 3.88e-52 - - - M - - - LPXTG-motif cell wall anchor domain protein
BONDMHDN_01904 0.0 serS 6.1.1.11 - J ko:K01875 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
BONDMHDN_01905 8.32e-128 yjcK 2.3.1.128 - J ko:K03790 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
BONDMHDN_01906 3.2e-143 - - - S - - - SNARE associated Golgi protein
BONDMHDN_01907 1.52e-195 - - - I - - - alpha/beta hydrolase fold
BONDMHDN_01908 2.71e-200 plcR - - K ko:K20480 ko02024,map02024 ko00000,ko00001,ko03000 Helix-turn-helix
BONDMHDN_01909 2.73e-107 - - - F - - - Nucleoside 2-deoxyribosyltransferase
BONDMHDN_01910 0.0 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 - C ko:K00135 ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Belongs to the aldehyde dehydrogenase family
BONDMHDN_01911 7.51e-205 - - - - - - - -
BONDMHDN_01912 1.08e-117 tadA 3.5.4.33 - F ko:K11991 - ko00000,ko01000,ko03016 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
BONDMHDN_01913 0.0 dnaX 2.7.7.7 - L ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BONDMHDN_01914 4.55e-106 - - - M - - - family 8
BONDMHDN_01915 6.31e-68 yaaK - - S ko:K09747 - ko00000 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
BONDMHDN_01916 9.21e-142 recR - - L ko:K06187 ko03440,map03440 ko00000,ko00001,ko03400 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
BONDMHDN_01917 1.18e-46 - - - S - - - Protein of unknown function (DUF2508)
BONDMHDN_01918 1.15e-146 tmk 2.7.4.9 - F ko:K00943 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BONDMHDN_01919 1.58e-70 yaaQ - - S - - - Cyclic-di-AMP receptor
BONDMHDN_01920 8.4e-199 holB 2.7.7.7 - L ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
BONDMHDN_01921 1.4e-80 yabA - - L - - - Involved in initiation control of chromosome replication
BONDMHDN_01922 3.05e-200 rsmI 2.1.1.198 - H ko:K07056 - ko00000,ko01000,ko03009 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BONDMHDN_01923 4.27e-167 fat 3.1.2.21 - I ko:K01071 ko00061,ko01100,map00061,map01100 ko00000,ko00001,ko01000,ko01004 Acyl-ACP thioesterase
BONDMHDN_01924 8.72e-111 - - - S - - - ECF transporter, substrate-specific component
BONDMHDN_01925 3.69e-171 yeaZ 2.3.1.234 - O ko:K01409,ko:K14742 - ko00000,ko01000,ko03016 Universal bacterial protein YeaZ
BONDMHDN_01926 4.59e-124 rimI 2.3.1.128 - K ko:K03789 - ko00000,ko01000,ko03009 Ribosomal-protein-alanine acetyltransferase
BONDMHDN_01927 4.76e-248 tsaD 2.3.1.234 - J ko:K01409 - ko00000,ko01000,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BONDMHDN_01928 2.53e-106 - - - K - - - Transcriptional regulator, MarR family
BONDMHDN_01929 0.0 XK27_09600 - - V ko:K06147,ko:K18891 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, ATP-binding protein
BONDMHDN_01930 0.0 XK27_09605 - - V ko:K18892 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter transmembrane region
BONDMHDN_01931 7.3e-131 ykoE - - S ko:K16925 - ko00000,ko00002,ko02000 ABC-type cobalt transport system, permease component
BONDMHDN_01932 0.0 - - - G - - - MFS/sugar transport protein
BONDMHDN_01933 1.24e-144 udk 2.7.1.48 - F ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 Zeta toxin
BONDMHDN_01934 1.19e-174 glnQ - - E ko:K10041 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
BONDMHDN_01935 8.69e-190 glnH - - ET ko:K10039 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
BONDMHDN_01936 7.42e-123 glnM - - P ko:K10040 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
BONDMHDN_01937 3.65e-141 glnP - - P ko:K10040 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
BONDMHDN_01938 4.22e-211 - - - S - - - Protein of unknown function (DUF2974)
BONDMHDN_01940 7.63e-43 - - - K ko:K03484 - ko00000,ko03000 Periplasmic binding protein domain
BONDMHDN_01941 2.51e-52 - - - K ko:K03484 - ko00000,ko03000 Periplasmic binding protein domain
BONDMHDN_01942 0.0 pulA 3.2.1.41 CBM48,GH13 G ko:K01200 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko01000 belongs to the glycosyl hydrolase 13 family
BONDMHDN_01943 3.86e-109 B4168_4126 - - L ko:K07493 - ko00000 Transposase
BONDMHDN_01944 6.38e-154 B4168_4126 - - L ko:K07493 - ko00000 Transposase
BONDMHDN_01945 0.0 yjcA - - S ko:K19350 ko02010,map02010 ko00000,ko00001,ko01504,ko02000 ABC transporter
BONDMHDN_01946 1.87e-58 - - - - - - - -
BONDMHDN_01947 9.46e-159 - 4.3.1.17 - E ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko01000 Serine dehydratase beta chain
BONDMHDN_01948 9.01e-198 sdaAA 4.3.1.17 - E ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko01000 L-serine dehydratase, iron-sulfur-dependent, alpha subunit
BONDMHDN_01949 6.51e-69 yitW - - S - - - Iron-sulfur cluster assembly protein
BONDMHDN_01950 2.13e-151 dapE 3.5.1.18 - E ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 succinyl-diaminopimelate desuccinylase
BONDMHDN_01951 6.95e-29 - - - S ko:K08987 - ko00000 Protein of unknown function (DUF1304)
BONDMHDN_01952 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
BONDMHDN_01953 1.13e-201 - - - V ko:K06147 - ko00000,ko02000 ABC transporter transmembrane region
BONDMHDN_01954 2.91e-83 - - - V ko:K06147 - ko00000,ko02000 ABC transporter transmembrane region
BONDMHDN_01955 8.64e-85 yybA - - K - - - Transcriptional regulator
BONDMHDN_01956 8e-108 XK27_03150 2.3.1.57 - K ko:K22441 - ko00000,ko01000 Acetyltransferase (GNAT) domain
BONDMHDN_01957 5.59e-109 - - - S - - - Peptidase propeptide and YPEB domain
BONDMHDN_01958 2.88e-98 ykoJ - - S - - - Peptidase propeptide and YPEB domain
BONDMHDN_01959 2.37e-242 - - - T - - - GHKL domain
BONDMHDN_01960 1.75e-168 - - - T - - - Transcriptional regulatory protein, C terminal
BONDMHDN_01961 1.28e-228 pepR 3.4.11.5 - E ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 Releases the N-terminal proline from various substrates
BONDMHDN_01962 0.0 - - - V - - - ABC transporter transmembrane region
BONDMHDN_01963 7.13e-67 - - - K - - - helix_turn_helix gluconate operon transcriptional repressor
BONDMHDN_01964 1.24e-188 - 5.2.1.13 - Q ko:K09835 ko00906,ko01100,ko01110,map00906,map01100,map01110 ko00000,ko00001,ko00002,ko01000 HI0933-like protein
BONDMHDN_01965 1.51e-154 - - - C - - - 2Fe-2S iron-sulfur cluster binding domain
BONDMHDN_01966 4.43e-179 sufC - - O ko:K09013 - ko00000,ko02000 FeS assembly ATPase SufC
BONDMHDN_01967 6.22e-232 sufD - - O ko:K07033,ko:K09015 - ko00000 FeS assembly protein SufD
BONDMHDN_01968 1.39e-224 sufS 2.8.1.7, 4.4.1.16 - E ko:K11717 ko00450,ko01100,map00450,map01100 ko00000,ko00001,ko01000 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BONDMHDN_01969 6.98e-78 nifU - - C ko:K04488 - ko00000 SUF system FeS assembly protein, NifU family
BONDMHDN_01970 0.0 sufB - - O ko:K07033,ko:K09014 - ko00000 assembly protein SufB
BONDMHDN_01971 8.12e-60 yitW - - S - - - Iron-sulfur cluster assembly protein
BONDMHDN_01972 1.27e-311 mntH - - P ko:K03322 - ko00000,ko02000 H( )-stimulated, divalent metal cation uptake system
BONDMHDN_01973 8.8e-207 - - - L - - - HNH nucleases
BONDMHDN_01974 1.11e-154 yfbR - - S ko:K07023 - ko00000 HD containing hydrolase-like enzyme
BONDMHDN_01975 2.59e-225 - - - G - - - Glycosyl hydrolases family 8
BONDMHDN_01976 8.22e-240 - - - M - - - Glycosyl transferase
BONDMHDN_01977 1.34e-09 - - - S - - - Uncharacterised protein family (UPF0236)
BONDMHDN_01978 9.69e-25 - - - - - - - -
BONDMHDN_01979 0.0 glpQ 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 Membrane domain of glycerophosphoryl diester phosphodiesterase
BONDMHDN_01980 3.34e-92 - - - S - - - Iron-sulphur cluster biosynthesis
BONDMHDN_01981 7.23e-244 ysdE - - P - - - Citrate transporter
BONDMHDN_01982 6.78e-124 lemA - - S ko:K03744 - ko00000 LemA family
BONDMHDN_01983 1.64e-207 htpX - - O ko:K03799 - ko00000,ko00002,ko01000,ko01002 Belongs to the peptidase M48B family
BONDMHDN_01984 1.05e-222 - - - K - - - helix_turn_helix, arabinose operon control protein
BONDMHDN_01985 1.23e-225 holA 2.7.7.7 - L ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III delta subunit
BONDMHDN_01986 0.0 comEC - - S ko:K02238 - ko00000,ko00002,ko02044 Competence protein ComEC
BONDMHDN_01987 2.7e-126 comEA - - L ko:K02237 - ko00000,ko00002,ko02044 Competence protein ComEA
BONDMHDN_01988 5.76e-244 lon - - T ko:K07177 ko02024,map02024 ko00000,ko00001,ko01002 Belongs to the peptidase S16 family
BONDMHDN_01989 7.07e-107 coaD 2.7.7.3 - H ko:K00954 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BONDMHDN_01990 5.21e-126 rsmD 2.1.1.171 - L ko:K08316 - ko00000,ko01000,ko03009 RNA methyltransferase, RsmD family
BONDMHDN_01991 9.94e-71 ylbG - - S - - - Uncharacterized protein conserved in bacteria (DUF2129)
BONDMHDN_01992 1.12e-267 ftsW - - D ko:K03588 ko04112,map04112 ko00000,ko00001,ko02000,ko03036 Belongs to the SEDS family
BONDMHDN_01993 0.0 typA - - T ko:K06207 - ko00000 GTP-binding protein TypA
BONDMHDN_01994 9.73e-132 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
BONDMHDN_01995 2.08e-33 - - - K - - - Helix-turn-helix domain
BONDMHDN_01997 6.66e-27 - - - S - - - CAAX protease self-immunity
BONDMHDN_01998 2.67e-35 - - - K ko:K07729 - ko00000,ko03000 Helix-turn-helix XRE-family like proteins
BONDMHDN_02000 4.11e-124 potE - - E - - - thought to be involved in transport amino acids across the membrane
BONDMHDN_02002 2.23e-189 - - - S - - - Putative ABC-transporter type IV
BONDMHDN_02003 4.13e-38 - - - M - - - Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
BONDMHDN_02004 3.85e-109 - - - - - - - -
BONDMHDN_02005 3.04e-53 - - - C - - - FMN_bind
BONDMHDN_02006 0.0 - - - I - - - Protein of unknown function (DUF2974)
BONDMHDN_02007 4.2e-249 pbpX1 - - V - - - Beta-lactamase
BONDMHDN_02008 1.05e-253 asd 1.2.1.11 - E ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BONDMHDN_02009 7.42e-276 aspC - - E ko:K00841 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
BONDMHDN_02010 6.89e-185 dapB 1.17.1.8 - E ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
BONDMHDN_02011 3.66e-225 dapA 4.3.3.7 - E ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BONDMHDN_02012 8.08e-281 hipO 3.5.1.47 - E ko:K05823 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
BONDMHDN_02013 1.17e-103 dapH 2.3.1.117, 2.3.1.89 - E ko:K00674,ko:K05822 ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
BONDMHDN_02014 5.46e-183 tpiA 5.3.1.1 - G ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
BONDMHDN_02015 2.86e-286 pgk 2.7.2.3 - F ko:K00927 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the phosphoglycerate kinase family
BONDMHDN_02016 2.86e-244 gap 1.2.1.12 - G ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
BONDMHDN_02017 9.53e-241 cggR - - K ko:K05311 - ko00000,ko03000 Putative sugar-binding domain
BONDMHDN_02019 0.0 - - - - - - - -
BONDMHDN_02020 0.0 ycaM - - E - - - amino acid
BONDMHDN_02021 5.21e-181 - - - S - - - Cysteine-rich secretory protein family
BONDMHDN_02022 3.87e-43 - - - S - - - Protein of unknown function (DUF3021)
BONDMHDN_02023 3.8e-60 - - - K - - - LytTr DNA-binding domain
BONDMHDN_02024 6.46e-119 cylB - - V ko:K11051 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC-2 type transporter
BONDMHDN_02025 3.23e-149 - - - V ko:K11050 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
BONDMHDN_02026 5.38e-101 - - - K - - - MerR HTH family regulatory protein
BONDMHDN_02027 0.0 ycnB - - U - - - Belongs to the major facilitator superfamily
BONDMHDN_02028 5.35e-121 - - - S - - - Domain of unknown function (DUF4811)
BONDMHDN_02029 2.75e-167 ybbM - - S ko:K02069 - ko00000,ko00002,ko02000 Uncharacterised protein family (UPF0014)
BONDMHDN_02030 3.16e-144 ybbL - - S ko:K02068 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
BONDMHDN_02031 0.0 - - - S - - - SH3-like domain
BONDMHDN_02032 1.16e-128 clpP 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
BONDMHDN_02033 8.59e-221 whiA - - K ko:K09762 - ko00000 May be required for sporulation
BONDMHDN_02034 1.61e-250 yvcK - - S - - - Required for morphogenesis under gluconeogenic growth conditions
BONDMHDN_02035 8.18e-210 yvcJ - - S ko:K06958 - ko00000,ko03019 Displays ATPase and GTPase activities
BONDMHDN_02036 1.55e-117 - - - S - - - Short repeat of unknown function (DUF308)
BONDMHDN_02037 0.0 uvrA - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
BONDMHDN_02038 0.0 uvrB - - L ko:K03702 ko03420,map03420 ko00000,ko00001,ko03400 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
BONDMHDN_02039 0.0 pgm 5.4.2.2 - G ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
BONDMHDN_02040 3.42e-232 trxB 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
BONDMHDN_02041 3.31e-239 gpsA 1.1.1.94 - I ko:K00057 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 Glycerol-3-phosphate dehydrogenase
BONDMHDN_02042 4.04e-203 lgt - - M ko:K13292 - ko00000,ko01000 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
BONDMHDN_02043 3.54e-230 hprK - - F ko:K06023 - ko00000,ko01000 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
BONDMHDN_02044 8.33e-27 - - - - - - - -
BONDMHDN_02045 2.24e-238 prfB - - J ko:K02836 - ko00000,ko03012 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BONDMHDN_02046 0.0 secA - - U ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
BONDMHDN_02047 1.55e-122 hpf - - J ko:K05808 - ko00000,ko03009 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BONDMHDN_02048 9.44e-169 comFC - - S ko:K02242 - ko00000,ko00002,ko02044 Competence protein
BONDMHDN_02049 2.68e-314 comFA - - L ko:K02240 - ko00000,ko00002,ko02044 Helicase C-terminal domain protein
BONDMHDN_02050 5.04e-154 yvyE 3.4.13.9 - S ko:K01271 - ko00000,ko01000,ko01002 YigZ family
BONDMHDN_02051 1.94e-268 tagO 2.7.8.33, 2.7.8.35 - M ko:K02851 - ko00000,ko01000,ko01003,ko01005 transferase
BONDMHDN_02052 3.52e-292 rny - - S ko:K18682 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Endoribonuclease that initiates mRNA decay
BONDMHDN_02053 1.17e-248 recA - - L ko:K03553 ko03440,map03440 ko00000,ko00001,ko00002,ko03400 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
BONDMHDN_02054 3.92e-123 pgsA 2.7.8.5 - I ko:K00995 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BONDMHDN_02055 1.63e-154 ymfM - - S ko:K15539 - ko00000 Helix-turn-helix domain
BONDMHDN_02056 1.39e-171 fabG 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Enoyl-(Acyl carrier protein) reductase
BONDMHDN_02057 1.06e-298 ymfH - - S - - - Peptidase M16
BONDMHDN_02058 4.2e-284 ymfF - - S - - - Peptidase M16 inactive domain protein
BONDMHDN_02059 0.0 ftsK - - D ko:K03466 - ko00000,ko03036 Belongs to the FtsK SpoIIIE SftA family
BONDMHDN_02060 3.12e-91 - - - S - - - Protein of unknown function (DUF1149)
BONDMHDN_02061 2.12e-136 cspR 2.1.1.207 - J ko:K03216 - ko00000,ko01000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
BONDMHDN_02062 2.19e-270 XK27_05220 - - S - - - AI-2E family transporter
BONDMHDN_02063 2.32e-86 srlB 2.7.1.198 - G ko:K02781 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system glucitol/sorbitol-specific IIA component
BONDMHDN_02064 2.9e-255 pgl 3.1.1.31 - G ko:K07404 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Lactonase, 7-bladed beta-propeller
BONDMHDN_02065 2.33e-230 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
BONDMHDN_02066 2.36e-213 adh2 1.1.1.1 - E ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 alcohol dehydrogenase
BONDMHDN_02067 2.24e-71 ykoJ - - S - - - Peptidase propeptide and YPEB domain
BONDMHDN_02068 3.02e-176 - - - L - - - An automated process has identified a potential problem with this gene model
BONDMHDN_02070 3.68e-176 ribD 1.1.1.193, 3.5.4.26 - H ko:K11752 ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024 ko00000,ko00001,ko00002,ko01000 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BONDMHDN_02071 3.05e-110 ribE 2.5.1.9 - H ko:K00793 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Riboflavin synthase
BONDMHDN_02072 3.61e-288 ribBA 3.5.4.25, 4.1.99.12 - H ko:K14652 ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
BONDMHDN_02073 1.91e-103 ribH 2.5.1.78 - H ko:K00794 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
BONDMHDN_02074 2.43e-118 - 2.7.7.49 - L ko:K00986 - ko00000,ko01000 PFAM RNA-directed DNA polymerase (Reverse transcriptase)
BONDMHDN_02075 1.16e-13 - - - L - - - Psort location Cytoplasmic, score
BONDMHDN_02076 3.7e-113 gtcA1 - - S - - - Teichoic acid glycosylation protein
BONDMHDN_02077 5.14e-105 ykuP - - C ko:K03839 - ko00000 Flavodoxin
BONDMHDN_02078 2.45e-211 map 3.4.11.18 - E ko:K01265 - ko00000,ko01000,ko01002 Methionine Aminopeptidase
BONDMHDN_02079 1.99e-208 rbn - - S ko:K07058 - ko00000 Belongs to the UPF0761 family
BONDMHDN_02080 3.22e-215 galU 2.7.7.9 - M ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 UTP-glucose-1-phosphate uridylyltransferase
BONDMHDN_02081 2.12e-273 atoB 1.1.1.88, 2.3.1.9 - I ko:K00054,ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the thiolase family
BONDMHDN_02082 8.22e-270 mvaA 1.1.1.88, 2.3.1.9 - C ko:K00054,ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the HMG-CoA reductase family
BONDMHDN_02083 2.49e-277 mvaS 2.3.3.10 - I ko:K01641 ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Hydroxymethylglutaryl-CoA synthase
BONDMHDN_02084 0.0 - - - L - - - Transposase
BONDMHDN_02085 5.27e-236 yumC 1.18.1.2, 1.19.1.1 - C ko:K21567 - ko00000,ko01000 Ferredoxin--NADP reductase
BONDMHDN_02086 8.39e-151 dedA - - S ko:K03975 - ko00000 SNARE-like domain protein
BONDMHDN_02087 2.15e-137 - - - S - - - Protein of unknown function (DUF1461)
BONDMHDN_02088 1.1e-184 nagD 3.1.3.41 - G ko:K01101 ko00627,ko01120,map00627,map01120 ko00000,ko00001,ko01000 Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
BONDMHDN_02089 3.75e-135 yutD - - S - - - Protein of unknown function (DUF1027)
BONDMHDN_02090 0.0 sasH 3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45 - F ko:K01081,ko:K01119,ko:K07004,ko:K08693,ko:K11751 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the 5'-nucleotidase family
BONDMHDN_02091 9.89e-74 - - - - - - - -
BONDMHDN_02092 0.0 - 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 glycerophosphoryl diester phosphodiesterase
BONDMHDN_02093 1.23e-231 ccpA - - K ko:K02529 - ko00000,ko03000 catabolite control protein A
BONDMHDN_02094 1.13e-272 pepQ 3.4.13.9 - E ko:K01271 - ko00000,ko01000,ko01002 Creatinase/Prolidase N-terminal domain
BONDMHDN_02095 2.52e-52 - - - - - - - -
BONDMHDN_02096 5.7e-209 - - - EG - - - EamA-like transporter family
BONDMHDN_02097 6.7e-211 - - - EG - - - EamA-like transporter family
BONDMHDN_02098 1.28e-106 yicL - - EG - - - EamA-like transporter family
BONDMHDN_02099 7.81e-107 - - - - - - - -
BONDMHDN_02100 1.06e-141 - - - - - - - -
BONDMHDN_02101 5.74e-185 - - - S - - - DUF218 domain
BONDMHDN_02102 0.0 yheS_2 - - S ko:K18231,ko:K19349 ko02010,map02010 br01600,ko00000,ko00001,ko01504,ko02000 ATPases associated with a variety of cellular activities
BONDMHDN_02103 8.23e-112 - - - - - - - -
BONDMHDN_02104 1.09e-74 - - - - - - - -
BONDMHDN_02105 7.26e-35 - - - S - - - Protein conserved in bacteria
BONDMHDN_02106 2.27e-71 - - - S - - - protein encoded in hypervariable junctions of pilus gene clusters
BONDMHDN_02107 1.77e-93 def2 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins
BONDMHDN_02108 1.05e-289 - - - N ko:K09384 - ko00000 Uncharacterized conserved protein (DUF2075)
BONDMHDN_02109 1.36e-260 pbpX - - V - - - Beta-lactamase
BONDMHDN_02110 0.0 - - - L - - - Helicase C-terminal domain protein
BONDMHDN_02111 0.0 - - - E ko:K20265 ko02024,map02024 ko00000,ko00001,ko02000 amino acid
BONDMHDN_02112 1.2e-202 xth 3.1.11.2 - L ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 exodeoxyribonuclease III
BONDMHDN_02113 3.54e-300 - - - L ko:K07497 - ko00000 COG2963 Transposase and inactivated derivatives
BONDMHDN_02114 1.59e-61 pspC - - KT ko:K03973 - ko00000,ko02048,ko03000 PspC domain
BONDMHDN_02116 7.92e-306 dacA 3.4.16.4 - M ko:K07258 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01002,ko01011 Belongs to the peptidase S11 family
BONDMHDN_02117 2.23e-197 nnrD 4.2.1.136, 5.1.99.6 - H ko:K17758,ko:K17759 - ko00000,ko01000 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BONDMHDN_02118 5.6e-129 - - - M - - - ErfK YbiS YcfS YnhG
BONDMHDN_02119 0.0 argS 6.1.1.19 - J ko:K01887 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Arginyl-tRNA synthetase
BONDMHDN_02120 6.03e-218 fba 4.1.2.13, 4.1.2.29 - G ko:K01624,ko:K03339 ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Fructose-1,6-bisphosphate aldolase, class II
BONDMHDN_02121 6.56e-118 - - - V - - - ABC transporter transmembrane region
BONDMHDN_02122 2.27e-179 - - - - - - - -
BONDMHDN_02126 1.95e-46 - - - - - - - -
BONDMHDN_02127 2.52e-76 - - - S - - - Cupredoxin-like domain
BONDMHDN_02128 4.44e-65 - - - S - - - Cupredoxin-like domain
BONDMHDN_02129 0.0 copA 3.6.3.3, 3.6.3.5, 3.6.3.54 - P ko:K01534,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 P-type ATPase
BONDMHDN_02130 6.63e-147 crp2 - - K ko:K10914,ko:K21562 ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111 ko00000,ko00001,ko03000 helix_turn_helix, cAMP Regulatory protein
BONDMHDN_02131 7.41e-136 - - - - - - - -
BONDMHDN_02132 1.03e-65 - - - EGP ko:K08368 - ko00000,ko02000 Sugar (and other) transporter
BONDMHDN_02133 6.66e-41 dapE 3.5.1.18 - E ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 succinyl-diaminopimelate desuccinylase
BONDMHDN_02134 1.22e-310 lctO 1.13.12.4 - C ko:K00467,ko:K10530 ko00620,map00620 ko00000,ko00001,ko01000 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
BONDMHDN_02135 2.44e-285 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BONDMHDN_02136 0.0 potE - - E - - - Amino Acid
BONDMHDN_02137 2.65e-107 - - - S - - - Fic/DOC family
BONDMHDN_02138 0.0 - - - - - - - -
BONDMHDN_02139 5.06e-111 - - - - - - - -
BONDMHDN_02140 1.61e-70 - - - - - - - -
BONDMHDN_02141 0.0 fhs 6.3.4.3 - F ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the formate--tetrahydrofolate ligase family
BONDMHDN_02142 3.16e-102 lspA 3.4.23.36 - MU ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 This protein specifically catalyzes the removal of signal peptides from prolipoproteins
BONDMHDN_02143 2.28e-221 rluD 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
BONDMHDN_02144 9.73e-254 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase glutamine chain
BONDMHDN_02145 0.0 carB1 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase
BONDMHDN_02146 1.17e-110 yfhC - - C - - - nitroreductase
BONDMHDN_02147 1.22e-174 ypbG 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
BONDMHDN_02148 0.0 pbg6 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
BONDMHDN_02149 1.8e-284 pts23C - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BONDMHDN_02150 5.73e-154 - - - K ko:K03492 - ko00000,ko03000 UTRA
BONDMHDN_02151 0.0 - 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
BONDMHDN_02152 4.04e-94 - - - S - - - Domain of unknown function (DUF3284)
BONDMHDN_02153 3.7e-258 XK27_00915 - - C - - - Luciferase-like monooxygenase
BONDMHDN_02154 7.94e-114 - - - K - - - GNAT family
BONDMHDN_02155 1.46e-161 - - - S - - - Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
BONDMHDN_02157 6.04e-49 - - - - - - - -
BONDMHDN_02158 0.0 - - - P ko:K06148 - ko00000,ko02000 ABC transporter
BONDMHDN_02159 8.44e-306 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
BONDMHDN_02160 0.0 yifK - - E ko:K03293 - ko00000 Amino acid permease
BONDMHDN_02161 3.53e-228 thyA 2.1.1.45 - F ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
BONDMHDN_02162 5.55e-119 folA 1.5.1.3 - H ko:K00287 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BONDMHDN_02163 0.0 aha1 - - P ko:K12952 - ko00000,ko01000 E1-E2 ATPase
BONDMHDN_02164 1.33e-225 - - - F ko:K15051 - ko00000 DNA/RNA non-specific endonuclease
BONDMHDN_02165 4.37e-205 metQ - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the nlpA lipoprotein family
BONDMHDN_02166 5.74e-243 metN - - P ko:K02071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BONDMHDN_02167 2.34e-122 metI - - P ko:K02072 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
BONDMHDN_02168 0.0 fumC 4.2.1.2 - C ko:K01679 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211 ko00000,ko00001,ko00002,ko01000 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
BONDMHDN_02169 0.0 frdA 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
BONDMHDN_02170 1.66e-217 ldh 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily. LDH family
BONDMHDN_02171 0.0 pepC4 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
BONDMHDN_02172 5.26e-171 - - - H - - - Aldolase/RraA
BONDMHDN_02173 0.0 citP - - P ko:K03319 - ko00000 Sodium:sulfate symporter transmembrane region
BONDMHDN_02174 8.12e-195 - - - I - - - Alpha/beta hydrolase family
BONDMHDN_02175 5.17e-249 citC 6.2.1.22 - H ko:K01910 ko02020,map02020 ko00000,ko00001,ko01000 Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
BONDMHDN_02176 1.6e-59 citD - - C ko:K01646 ko02020,map02020 ko00000,ko00001 Covalent carrier of the coenzyme of citrate lyase
BONDMHDN_02177 3.46e-212 citE 4.1.3.34 - G ko:K01644 ko02020,map02020 ko00000,ko00001,ko01000 Belongs to the HpcH HpaI aldolase family
BONDMHDN_02178 0.0 citF 2.8.3.10 - H ko:K01643 ko02020,map02020 ko00000,ko00001,ko01000 Citrate (pro-3S)-lyase alpha chain
BONDMHDN_02179 7.19e-93 ytwI - - S - - - Protein of unknown function (DUF441)
BONDMHDN_02180 1.46e-31 - - - - - - - -
BONDMHDN_02181 3.51e-187 cbiQ - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 cobalt transport
BONDMHDN_02182 0.0 ykoD - - P ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
BONDMHDN_02183 5.38e-125 - - - S ko:K16924 - ko00000,ko00002,ko02000 UPF0397 protein
BONDMHDN_02184 8.1e-87 - - - S - - - Domain of unknown function DUF1828
BONDMHDN_02185 7.91e-14 - - - - - - - -
BONDMHDN_02186 2.93e-67 - - - - - - - -
BONDMHDN_02187 1.05e-226 citR - - K - - - Putative sugar-binding domain
BONDMHDN_02188 0.0 - - - S - - - Putative threonine/serine exporter
BONDMHDN_02190 1.51e-44 - - - - - - - -
BONDMHDN_02191 7.7e-21 - - - - - - - -
BONDMHDN_02192 1.85e-115 ybaK - - S ko:K03976 - ko00000,ko01000,ko03016 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BONDMHDN_02193 1.38e-223 prmA - - J ko:K02687 - ko00000,ko01000,ko03009 Ribosomal protein L11 methyltransferase
BONDMHDN_02194 6.77e-49 - - - - - - - -
BONDMHDN_02195 0.0 relA 2.7.6.5 - KT ko:K00951 ko00230,map00230 ko00000,ko00001,ko01000 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BONDMHDN_02196 1.8e-99 dtd - - J ko:K07560 - ko00000,ko01000,ko03016 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
BONDMHDN_02197 2.03e-310 hisS 6.1.1.21 - J ko:K01892 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 histidyl-tRNA synthetase
BONDMHDN_02198 0.0 aspS 6.1.1.12 - J ko:K01876 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
BONDMHDN_02199 9.14e-283 aspC - - E ko:K00841 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
BONDMHDN_02201 3.82e-276 coaBC 4.1.1.36, 6.3.2.5 - H ko:K01598,ko:K13038 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BONDMHDN_02202 1.19e-43 - - - S - - - reductase
BONDMHDN_02203 2.98e-50 - - - S - - - reductase
BONDMHDN_02204 6.32e-41 - - - S - - - reductase
BONDMHDN_02205 1.77e-189 yxeH - - S - - - hydrolase
BONDMHDN_02206 5.74e-69 - - - - - - - -
BONDMHDN_02207 7.51e-174 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
BONDMHDN_02208 1.38e-144 tal 2.2.1.2 - H ko:K00616 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Transaldolase/Fructose-6-phosphate aldolase
BONDMHDN_02209 0.0 - - - G - - - PTS system sorbose-specific iic component
BONDMHDN_02210 3.59e-69 - 2.7.1.191 - G ko:K02793 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system fructose IIA component
BONDMHDN_02211 5.36e-100 - 2.7.1.191 - G ko:K02794 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system sorbose subfamily IIB component
BONDMHDN_02213 1.98e-191 yhaH - - S - - - Protein of unknown function (DUF805)
BONDMHDN_02214 2.89e-173 glnQ - - E ko:K17076 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
BONDMHDN_02215 0.0 XK27_05795 - - P ko:K17073,ko:K17074 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
BONDMHDN_02216 1.41e-155 yxlJ 3.2.2.21 - L ko:K03652 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Belongs to the DNA glycosylase MPG family
BONDMHDN_02217 1.54e-84 yeaO - - S - - - Protein of unknown function, DUF488
BONDMHDN_02218 9.4e-164 terC - - P - - - Integral membrane protein TerC family
BONDMHDN_02219 5.09e-119 adaB 2.1.1.63 - L ko:K00567,ko:K10778,ko:K13531 - ko00000,ko01000,ko03000,ko03400 6-O-methylguanine DNA methyltransferase, DNA binding domain
BONDMHDN_02220 1.24e-169 cobB - - K ko:K12410 - ko00000,ko01000 SIR2 family
BONDMHDN_02222 5.94e-100 - - - S ko:K06889 - ko00000 X-Pro dipeptidyl-peptidase (S15 family)
BONDMHDN_02223 2.25e-57 - - - K - - - Tetracycline repressor, C-terminal all-alpha domain
BONDMHDN_02225 3.49e-113 - - - K - - - LysR substrate binding domain
BONDMHDN_02226 6.46e-44 - - - S - - - Domain of unknown function (DUF4440)
BONDMHDN_02227 1.17e-87 - - - GM - - - NAD(P)H-binding
BONDMHDN_02228 1.64e-169 adh2 1.1.1.1 - E ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 alcohol dehydrogenase
BONDMHDN_02229 1.44e-62 - - - S - - - Belongs to the short-chain dehydrogenases reductases (SDR) family
BONDMHDN_02230 3.35e-269 - - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
BONDMHDN_02231 4.36e-142 XK27_00160 - - S - - - Domain of unknown function (DUF5052)
BONDMHDN_02232 1.5e-90 - - - - - - - -
BONDMHDN_02233 1.24e-258 xerS - - L ko:K03733 - ko00000,ko03036 Belongs to the 'phage' integrase family
BONDMHDN_02234 0.0 mutS1 - - L ko:K07456 ko03430,map03430 ko00000,ko00001,ko03400 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
BONDMHDN_02235 3.69e-54 - - - L ko:K07473 - ko00000,ko02048 Addiction module antitoxin, RelB DinJ family
BONDMHDN_02236 5.05e-11 - - - - - - - -
BONDMHDN_02237 3.58e-61 - - - S ko:K07124 - ko00000 Enoyl-(Acyl carrier protein) reductase
BONDMHDN_02238 2.18e-122 yneE - - K - - - Transcriptional regulator
BONDMHDN_02239 3.87e-80 yneE - - K - - - Transcriptional regulator
BONDMHDN_02240 9.01e-287 - - - S ko:K07133 - ko00000 cog cog1373
BONDMHDN_02241 8.73e-187 - - - S - - - haloacid dehalogenase-like hydrolase
BONDMHDN_02242 1.28e-292 pbuG - - S ko:K06901 - ko00000,ko02000 permease
BONDMHDN_02243 3.06e-53 bbsF_1 2.8.3.19 - C ko:K18702 - ko00000,ko01000 Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
BONDMHDN_02244 9.48e-261 frc 2.8.3.16 - C ko:K07749 - ko00000,ko01000 Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
BONDMHDN_02245 0.0 spxB 1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8 - EH ko:K00156,ko:K00158,ko:K01577,ko:K01652 ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the TPP enzyme family
BONDMHDN_02246 0.0 ydiF - - S ko:K06158 - ko00000,ko03012 ABC transporter, ATP-binding protein
BONDMHDN_02247 8.74e-146 rex - - K ko:K01926 - ko00000,ko03000 Modulates transcription in response to changes in cellular NADH NAD( ) redox state
BONDMHDN_02248 2.18e-112 - - - GKT - - - domain protein
BONDMHDN_02249 0.0 - 3.2.1.170, 3.2.1.24 GH38 G ko:K01191,ko:K15524 ko00511,map00511 ko00000,ko00001,ko01000,ko04131 Glycosyl hydrolases family 38 N-terminal domain
BONDMHDN_02250 4.34e-198 fptC - - U ko:K02770 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko02000 system, fructose-specific IIC component
BONDMHDN_02251 5.84e-50 - - - G - - - Psort location Cytoplasmic, score 9.98
BONDMHDN_02252 2.4e-54 - 2.7.1.202 - G ko:K02768 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BONDMHDN_02253 0.0 pepD4 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
BONDMHDN_02254 2.12e-132 lolD - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
BONDMHDN_02255 1.05e-233 yxeA - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
BONDMHDN_02256 1.45e-119 - - - K - - - Bacterial regulatory proteins, tetR family
BONDMHDN_02257 2.75e-143 - - - G - - - phosphoglycerate mutase
BONDMHDN_02258 8.05e-180 - - - S ko:K06889 - ko00000 Alpha/beta hydrolase family
BONDMHDN_02259 1.45e-183 XK27_08125 - - S ko:K09861 - ko00000 Belongs to the UPF0246 family
BONDMHDN_02260 2.14e-138 - - - D - - - Ftsk spoiiie family protein
BONDMHDN_02261 1.74e-185 - - - S - - - Replication initiation factor
BONDMHDN_02262 1.33e-72 - - - - - - - -
BONDMHDN_02263 4.04e-36 - - - - - - - -
BONDMHDN_02264 3.5e-280 - - - L - - - Belongs to the 'phage' integrase family
BONDMHDN_02266 9.75e-80 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
BONDMHDN_02267 8.25e-65 - - - V ko:K01990,ko:K01992 - ko00000,ko00002,ko02000 Transport permease protein
BONDMHDN_02269 2.36e-157 aapA - - M - - - Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
BONDMHDN_02270 7.44e-129 - - - L - - - An automated process has identified a potential problem with this gene model
BONDMHDN_02271 4.1e-34 dnaQ 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BONDMHDN_02272 5.34e-77 tnpR1 - - L - - - Resolvase, N terminal domain
BONDMHDN_02273 1.15e-121 apt 2.4.2.7 - F ko:K00759 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000,ko04147 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BONDMHDN_02274 0.0 recJ - - L ko:K07462 ko03410,ko03430,ko03440,map03410,map03430,map03440 ko00000,ko00001,ko01000,ko03400 Single-stranded-DNA-specific exonuclease RecJ
BONDMHDN_02275 7e-131 srtA 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 sortase family
BONDMHDN_02276 0.0 lepA - - M ko:K03596 ko05134,map05134 ko00000,ko00001 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
BONDMHDN_02277 5.88e-278 dnaJ - - O ko:K03686 - ko00000,ko03029,ko03110 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
BONDMHDN_02278 0.0 dnaK - - O ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Heat shock 70 kDa protein
BONDMHDN_02279 3.74e-109 grpE - - O ko:K03687 - ko00000,ko03029,ko03110 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BONDMHDN_02280 1.48e-247 hrcA - - K ko:K03705 - ko00000,ko03000 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
BONDMHDN_02281 5.35e-223 ribF 2.7.1.26, 2.7.7.2 - H ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the ribF family
BONDMHDN_02282 1.64e-198 truB 5.4.99.25 - J ko:K03177,ko:K03483 - ko00000,ko01000,ko03000,ko03016 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BONDMHDN_02283 1.67e-79 rbfA - - J ko:K02834 - ko00000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
BONDMHDN_02284 0.0 infB - - J ko:K02519 - ko00000,ko03012,ko03029 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
BONDMHDN_02285 1.61e-64 ylxQ - - J - - - ribosomal protein
BONDMHDN_02286 3.75e-63 ylxR - - K ko:K07742 - ko00000 Protein of unknown function (DUF448)
BONDMHDN_02287 1.19e-259 nusA - - K ko:K02600 - ko00000,ko03009,ko03021 Participates in both transcription termination and antitermination
BONDMHDN_02288 3.4e-108 rimP - - J ko:K09748 - ko00000,ko03009 Required for maturation of 30S ribosomal subunits
BONDMHDN_02289 0.0 polC 2.7.7.7 - L ko:K03763 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BONDMHDN_02290 0.0 proS 6.1.1.15 - J ko:K01881 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
BONDMHDN_02291 6.38e-254 rseP - - M ko:K11749 ko02024,ko04112,map02024,map04112 ko00000,ko00001,ko01000,ko01002 zinc metalloprotease
BONDMHDN_02292 3.93e-181 cdsA 2.7.7.41 - I ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 ko00000,ko00001,ko00002,ko01000 Belongs to the CDS family
BONDMHDN_02293 6.38e-178 uppS 2.5.1.31 - H ko:K00806 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BONDMHDN_02294 8.22e-120 frr - - J ko:K02838 - ko00000,ko03012 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
BONDMHDN_02295 5.86e-168 pyrH 2.7.4.22 - F ko:K09903 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphorylation of UMP to UDP
BONDMHDN_02296 1.76e-235 tsf - - J ko:K02357 - ko00000,ko03012,ko03029 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
BONDMHDN_02297 2.21e-180 rpsB - - J ko:K02967 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS2 family
BONDMHDN_02298 2.03e-251 yabB 2.1.1.223 - L ko:K07461,ko:K15460 - ko00000,ko01000,ko03016 Methyltransferase small domain
BONDMHDN_02299 1.65e-151 plsC 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Acyltransferase
BONDMHDN_02300 4.94e-292 cfa 2.1.1.79 - M ko:K00574 - ko00000,ko01000 cyclopropane-fatty-acyl-phospholipid synthase
BONDMHDN_02301 0.0 pepO - - O ko:K07386 - ko00000,ko01000,ko01002 Peptidase family M13
BONDMHDN_02302 0.0 mdlB - - V ko:K06147,ko:K18890 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
BONDMHDN_02303 0.0 mdlA - - V ko:K06148,ko:K18889 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
BONDMHDN_02304 1.3e-40 XK26_06720 - - S ko:K09976 - ko00000 Uncharacterised protein family (UPF0154)
BONDMHDN_02305 4.16e-51 ynzC - - S - - - UPF0291 protein
BONDMHDN_02306 9.86e-146 lexA 3.4.21.88 - K ko:K01356 - ko00000,ko00002,ko01000,ko01002,ko03400 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BONDMHDN_02307 7.18e-187 - - - E - - - GDSL-like Lipase/Acylhydrolase family
BONDMHDN_02308 1.15e-154 ung2 3.2.2.27 - L ko:K21929 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Uracil-DNA glycosylase
BONDMHDN_02309 4.96e-270 - - - S - - - SLAP domain
BONDMHDN_02310 1.64e-74 rplS - - J ko:K02884 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
BONDMHDN_02311 1.63e-173 trmD 2.1.1.228 - J ko:K00554 - ko00000,ko01000,ko03016 Belongs to the RNA methyltransferase TrmD family
BONDMHDN_02312 2.08e-122 rimM - - J ko:K02860 - ko00000,ko03009 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
BONDMHDN_02313 6.78e-60 rpsP - - J ko:K02959 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bS16 family
BONDMHDN_02314 2.32e-290 ffh 3.6.5.4 - U ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko01000,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BONDMHDN_02315 5.56e-72 ylxM - - S ko:K09787 - ko00000 Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
BONDMHDN_02316 0.0 ctrA - - E ko:K03294 - ko00000 amino acid
BONDMHDN_02317 4.22e-185 - - - M - - - Rib/alpha-like repeat
BONDMHDN_02318 0.0 - - - S ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
BONDMHDN_02319 2.05e-115 - - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Cobalt transport protein
BONDMHDN_02320 1.09e-223 pepI 3.4.11.5 - E ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 Releases the N-terminal proline from various substrates
BONDMHDN_02321 8.19e-116 - - - G - - - Peptidase_C39 like family
BONDMHDN_02322 9.23e-209 - - - M - - - NlpC/P60 family
BONDMHDN_02323 1.68e-44 - - - G - - - Peptidase_C39 like family
BONDMHDN_02324 1.58e-101 smpB - - J ko:K03664 - ko00000 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
BONDMHDN_02325 0.0 rnr - - J ko:K12573 ko03018,map03018 ko00000,ko00001,ko01000,ko03016,ko03019 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
BONDMHDN_02326 1.3e-40 secG - - U ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase
BONDMHDN_02327 0.0 ltaS 2.7.8.20 - M ko:K19005 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
BONDMHDN_02328 5.18e-128 - - - G - - - Aldose 1-epimerase
BONDMHDN_02329 9.78e-257 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
BONDMHDN_02330 1.03e-145 plsY1 2.3.1.15 - I ko:K08591 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
BONDMHDN_02331 0.0 XK27_08315 - - M - - - Sulfatase
BONDMHDN_02332 4.46e-226 iunH 3.2.2.1 - F ko:K01239 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 inosine-uridine preferring nucleoside hydrolase
BONDMHDN_02333 1.01e-116 alkD - - L - - - DNA alkylation repair enzyme
BONDMHDN_02334 0.0 pbg4 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
BONDMHDN_02335 1.33e-165 - - - K ko:K03492 - ko00000,ko03000 UTRA domain
BONDMHDN_02336 1.32e-74 pts20B 2.7.1.196, 2.7.1.205 - G ko:K02760 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
BONDMHDN_02337 4.56e-78 celC 2.7.1.196, 2.7.1.205 - G ko:K02759 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose Cellobiose specific IIA subunit
BONDMHDN_02338 2.72e-15 - - - - - - - -
BONDMHDN_02342 0.0 sacB 2.4.1.10, 2.4.1.9 GH68 M ko:K00692,ko:K20811 ko00500,ko01100,ko02020,map00500,map01100,map02020 ko00000,ko00001,ko01000,ko01003 Levansucrase/Invertase
BONDMHDN_02343 2.36e-12 - - - S - - - Bacteriophage abortive infection AbiH
BONDMHDN_02345 6.45e-93 - - - K - - - LytTr DNA-binding domain
BONDMHDN_02346 1.05e-119 - - - S - - - membrane
BONDMHDN_02347 2.61e-23 - - - - - - - -
BONDMHDN_02348 3.58e-251 - - - S - - - Putative peptidoglycan binding domain
BONDMHDN_02349 9.18e-202 - - - C - - - Domain of unknown function (DUF4931)
BONDMHDN_02350 5.5e-155 - - - - - - - -
BONDMHDN_02351 1.51e-117 pyrR 2.4.2.9 - F ko:K02825 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000,ko03000 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
BONDMHDN_02352 1.66e-303 pyrP - - F ko:K02824 - ko00000,ko02000 Permease
BONDMHDN_02353 0.0 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative DNA-binding domain
BONDMHDN_02354 1.05e-45 - - - - - - - -
BONDMHDN_02355 1.2e-199 - 1.1.1.346 - S ko:K06221 - ko00000,ko01000 reductase
BONDMHDN_02356 7.1e-136 ybbB - - S - - - Protein of unknown function (DUF1211)
BONDMHDN_02357 0.0 yjcA - - S ko:K19350 ko02010,map02010 ko00000,ko00001,ko01504,ko02000 ABC transporter
BONDMHDN_02358 3.46e-32 - - - S - - - Alpha beta hydrolase
BONDMHDN_02359 1.47e-303 brnQ - - U ko:K03311 - ko00000 Component of the transport system for branched-chain amino acids
BONDMHDN_02360 3.39e-88 - - - S ko:K06915 - ko00000 cog cog0433
BONDMHDN_02361 9.86e-146 - - - F ko:K15051 - ko00000 DNA/RNA non-specific endonuclease
BONDMHDN_02362 8.81e-40 - - - M - - - Mycoplasma protein of unknown function, DUF285
BONDMHDN_02364 1.51e-123 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
BONDMHDN_02365 6.01e-153 rsuA 5.4.99.19 - J ko:K06183 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
BONDMHDN_02366 3.97e-57 - - - S - - - PD-(D/E)XK nuclease family transposase
BONDMHDN_02367 1.06e-86 - - - S - - - GtrA-like protein
BONDMHDN_02368 1.73e-219 yfdH - GT2 M ko:K12999 - ko00000,ko01000,ko01003,ko01005 Glycosyltransferase, group 2 family protein
BONDMHDN_02369 3.33e-123 - - - S - - - Protein of unknown function (DUF3990)
BONDMHDN_02370 2.09e-59 - - - - - - - -
BONDMHDN_02371 9.25e-13 - - - S - - - PD-(D/E)XK nuclease family transposase
BONDMHDN_02372 0.0 yoaB 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
BONDMHDN_02373 1.73e-165 - - - S ko:K06926 - ko00000 AAA domain, putative AbiEii toxin, Type IV TA system
BONDMHDN_02374 2.91e-67 - - - - - - - -
BONDMHDN_02375 0.0 valS 6.1.1.9 - J ko:K01873 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
BONDMHDN_02376 1.22e-306 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the folylpolyglutamate synthase family
BONDMHDN_02377 1.06e-162 - - - S - - - Haloacid dehalogenase-like hydrolase
BONDMHDN_02378 6.18e-150 radC - - L ko:K03630 - ko00000 DNA repair protein
BONDMHDN_02379 8.26e-226 mreB - - D ko:K03569 - ko00000,ko02048,ko03036,ko04812 cell shape determining protein MreB
BONDMHDN_02380 8.27e-189 mreC - - M ko:K03570 - ko00000,ko03036 Involved in formation and maintenance of cell shape
BONDMHDN_02381 5.43e-122 mreD - - - ko:K03571 - ko00000,ko03036 -
BONDMHDN_02382 1.4e-09 - - - S - - - Protein of unknown function (DUF4044)
BONDMHDN_02383 1.02e-72 - - - S - - - Protein of unknown function (DUF3397)
BONDMHDN_02384 5.63e-102 mraZ - - K ko:K03925 - ko00000 Belongs to the MraZ family
BONDMHDN_02385 1.49e-223 rsmH 2.1.1.199 - J ko:K03438 - ko00000,ko01000,ko03009 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
BONDMHDN_02386 6.55e-72 ftsL - - D - - - Cell division protein FtsL
BONDMHDN_02387 0.0 pbpX - - M ko:K08724,ko:K12552,ko:K12556 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011 Penicillin-binding Protein
BONDMHDN_02388 4.43e-224 mraY 2.7.8.13 - M ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BONDMHDN_02389 0.0 murD 6.3.2.9 - M ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BONDMHDN_02390 1.65e-265 murG 2.4.1.227 GT28 M ko:K02563 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BONDMHDN_02391 3.14e-194 divIB - - D ko:K03589 ko04112,map04112 ko00000,ko00001,ko03036 Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
BONDMHDN_02392 1.54e-309 ftsA - - D ko:K03590 ko04112,map04112 ko00000,ko00001,ko03036,ko04812 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
BONDMHDN_02393 2.52e-300 ftsZ - - D ko:K03531 ko04112,map04112 ko00000,ko00001,ko02048,ko03036,ko04812 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BONDMHDN_02394 1.43e-96 sepF - - D ko:K09772 - ko00000,ko03036 Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
BONDMHDN_02395 2.42e-60 yggT - - S ko:K02221 - ko00000,ko02044 YGGT family
BONDMHDN_02396 4.68e-191 ylmH - - S - - - S4 domain protein
BONDMHDN_02397 6.3e-138 divIVA - - D ko:K04074 - ko00000,ko03036 DivIVA domain protein
BONDMHDN_02398 0.0 ileS 6.1.1.5 - J ko:K01870 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BONDMHDN_02399 2.32e-43 cspA - - K ko:K03704 - ko00000,ko03000 'Cold-shock' DNA-binding domain
BONDMHDN_02400 4.26e-133 nudF 3.6.1.13 - L ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 ADP-ribose pyrophosphatase
BONDMHDN_02401 1.22e-55 - - - - - - - -
BONDMHDN_02402 2.05e-163 mtnN 3.2.2.9 - E ko:K01243 ko00270,ko01100,ko01230,map00270,map01100,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BONDMHDN_02403 1.62e-276 iscS 2.8.1.7 - E ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Aminotransferase class V
BONDMHDN_02404 9.98e-75 XK27_04120 - - S - - - Putative amino acid metabolism
BONDMHDN_02405 4.47e-278 mnmA 2.8.1.13 - J ko:K00566 ko04122,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
BONDMHDN_02406 4.7e-163 pgm - - G - - - Phosphoglycerate mutase family
BONDMHDN_02407 2.31e-148 - - - S - - - repeat protein
BONDMHDN_02408 0.0 recD2 3.1.11.5 - L ko:K03581 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
BONDMHDN_02409 0.0 - - - L - - - Nuclease-related domain
BONDMHDN_02410 3.07e-235 ytlR - - I - - - Diacylglycerol kinase catalytic domain
BONDMHDN_02411 0.0 rnjA - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BONDMHDN_02412 5.22e-45 ykzG - - S - - - Belongs to the UPF0356 family

eggNOG-mapper v2.1.12 (Database: eggNOG v5.0.2, Mar. 2021 release)