ORF_ID e_value Gene_name EC_number CAZy COGs KEGG_ko KEGG_Pathway BRITE Description
GDEDEPGN_00001 1.47e-303 brnQ - - U ko:K03311 - ko00000 Component of the transport system for branched-chain amino acids
GDEDEPGN_00002 3.46e-32 - - - S - - - Alpha beta hydrolase
GDEDEPGN_00003 0.0 yjcA - - S ko:K19350 ko02010,map02010 ko00000,ko00001,ko01504,ko02000 ABC transporter
GDEDEPGN_00004 7.1e-136 ybbB - - S - - - Protein of unknown function (DUF1211)
GDEDEPGN_00006 8.81e-40 - - - M - - - Mycoplasma protein of unknown function, DUF285
GDEDEPGN_00007 9.86e-146 - - - F ko:K15051 - ko00000 DNA/RNA non-specific endonuclease
GDEDEPGN_00008 3.39e-88 - - - S ko:K06915 - ko00000 cog cog0433
GDEDEPGN_00009 1.28e-226 - - - S - - - PFAM Archaeal ATPase
GDEDEPGN_00010 3.11e-250 - - - I - - - transferase activity, transferring acyl groups other than amino-acyl groups
GDEDEPGN_00011 4.95e-164 citG 2.4.2.52 - H ko:K05966 ko02020,map02020 ko00000,ko00001,ko01000 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
GDEDEPGN_00012 9.44e-183 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
GDEDEPGN_00013 1.19e-128 - - - T - - - Region found in RelA / SpoT proteins
GDEDEPGN_00014 1.52e-135 dltr - - K - - - response regulator
GDEDEPGN_00015 2.05e-146 sptS - - T - - - Histidine kinase
GDEDEPGN_00016 2.27e-132 sptS - - T - - - Histidine kinase
GDEDEPGN_00017 6.74e-267 - - - EGP - - - Major Facilitator Superfamily
GDEDEPGN_00018 3.91e-91 - - - O - - - OsmC-like protein
GDEDEPGN_00019 3.72e-111 yhaH - - S - - - Protein of unknown function (DUF805)
GDEDEPGN_00020 2.9e-48 - - - - - - - -
GDEDEPGN_00021 1.24e-08 - - - - - - - -
GDEDEPGN_00022 4.83e-136 pncA - - Q - - - Isochorismatase family
GDEDEPGN_00023 7.5e-160 - - - - - - - -
GDEDEPGN_00026 4.13e-83 - - - - - - - -
GDEDEPGN_00027 3.56e-47 - - - - - - - -
GDEDEPGN_00028 5.66e-16 - - - L - - - Transposase and inactivated derivatives, IS30 family
GDEDEPGN_00029 3.46e-18 - - - L - - - Transposase and inactivated derivatives, IS30 family
GDEDEPGN_00030 1.14e-87 - - - L - - - Transposase and inactivated derivatives, IS30 family
GDEDEPGN_00031 1.03e-262 - - - G - - - Glycosyl hydrolases family 8
GDEDEPGN_00032 3.25e-315 - - - M - - - Glycosyl transferase
GDEDEPGN_00034 9.39e-195 - - - - - - - -
GDEDEPGN_00035 3.42e-30 - - - S - - - HicA toxin of bacterial toxin-antitoxin,
GDEDEPGN_00036 1.23e-313 purB 4.3.2.2 - F ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
GDEDEPGN_00037 0.0 purA 6.3.4.4 - F ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
GDEDEPGN_00038 6.69e-239 guaC 1.7.1.7 - F ko:K00364 ko00230,map00230 ko00000,ko00001,ko01000 Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
GDEDEPGN_00039 7.19e-281 galK 2.7.1.6 - F ko:K00849 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
GDEDEPGN_00040 0.0 galT 2.7.7.12 - G ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 ko00000,ko00001,ko00002,ko01000 UDP-glucose--hexose-1-phosphate uridylyltransferase
GDEDEPGN_00041 3.94e-252 galM 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the interconversion of alpha and beta anomers of maltose
GDEDEPGN_00042 0.0 glvC 2.7.1.208 - G ko:K02749,ko:K02750 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system, EIIB
GDEDEPGN_00043 4.3e-188 - - - S - - - hydrolase
GDEDEPGN_00044 3.98e-125 - - - S - - - Phospholipase, patatin family
GDEDEPGN_00045 4.4e-165 - - - S - - - PAS domain
GDEDEPGN_00047 6.84e-70 - - - - - - - -
GDEDEPGN_00048 6.31e-84 - - - - - - - -
GDEDEPGN_00049 3.24e-45 - - - T ko:K07171 - ko00000,ko01000,ko02048 PemK-like, MazF-like toxin of type II toxin-antitoxin system
GDEDEPGN_00050 5.3e-32 - - - - - - - -
GDEDEPGN_00051 2.48e-226 - - - M - - - Glycosyl hydrolases family 25
GDEDEPGN_00052 9.28e-41 - - - - - - - -
GDEDEPGN_00053 1.22e-24 - - - - - - - -
GDEDEPGN_00056 2.12e-27 - - - S - - - Phage uncharacterised protein (Phage_XkdX)
GDEDEPGN_00057 1.01e-54 - - - - - - - -
GDEDEPGN_00060 3.95e-17 - - - S - - - N-acetylmuramoyl-L-alanine amidase activity
GDEDEPGN_00062 4.11e-140 - - - S - - - Baseplate J-like protein
GDEDEPGN_00063 1.55e-40 - - - - - - - -
GDEDEPGN_00064 4.1e-49 - - - - - - - -
GDEDEPGN_00065 2.3e-128 - - - - - - - -
GDEDEPGN_00066 9.82e-61 - - - - - - - -
GDEDEPGN_00067 7.64e-54 - - - M - - - LysM domain
GDEDEPGN_00068 1.18e-225 - - - L - - - Phage tail tape measure protein TP901
GDEDEPGN_00071 8.17e-168 - - - S - - - Protein of unknown function (DUF3383)
GDEDEPGN_00074 5.56e-22 - - - - - - - -
GDEDEPGN_00075 4.47e-35 - - - S - - - Protein of unknown function (DUF4054)
GDEDEPGN_00077 8.98e-25 - - - - - - - -
GDEDEPGN_00078 7.53e-73 - - - S ko:K09960 - ko00000 Uncharacterized protein conserved in bacteria (DUF2213)
GDEDEPGN_00079 2.38e-28 - - - S - - - Lysin motif
GDEDEPGN_00080 3.33e-70 - - - S - - - Phage Mu protein F like protein
GDEDEPGN_00081 2.32e-110 - - - S ko:K09961 - ko00000 Protein of unknown function (DUF1073)
GDEDEPGN_00082 4.27e-234 - - - S - - - Terminase-like family
GDEDEPGN_00085 9.77e-27 - - - S - - - N-methyltransferase activity
GDEDEPGN_00093 8.55e-49 - - - S - - - VRR_NUC
GDEDEPGN_00095 7.58e-90 - - - S - - - ORF6C domain
GDEDEPGN_00100 3.9e-53 - - - Q - - - methyltransferase
GDEDEPGN_00104 5.95e-24 radC - - E ko:K03630 - ko00000 Belongs to the UPF0758 family
GDEDEPGN_00106 2.6e-21 ansR - - K - - - Transcriptional regulator
GDEDEPGN_00107 1.3e-40 - - - K - - - Helix-turn-helix domain
GDEDEPGN_00108 8.26e-56 - - - S - - - ERF superfamily
GDEDEPGN_00109 2.49e-67 - - - S - - - Protein of unknown function (DUF1351)
GDEDEPGN_00112 1.04e-06 - - - K - - - Tetratricopeptide repeat
GDEDEPGN_00115 2.78e-32 - - - S - - - Domain of unknown function (DUF771)
GDEDEPGN_00117 3.05e-19 - - - K - - - Helix-turn-helix domain
GDEDEPGN_00120 2.63e-194 int3 - - L - - - Belongs to the 'phage' integrase family
GDEDEPGN_00122 0.0 nrdE 1.17.4.1 - F ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GDEDEPGN_00123 1.82e-97 nrdI - - F ko:K03647 - ko00000 NrdI Flavodoxin like
GDEDEPGN_00124 2.11e-249 nrdF 1.17.4.1 - F ko:K00526 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GDEDEPGN_00125 8.56e-126 - - - V - - - ABC transporter transmembrane region
GDEDEPGN_00126 6.69e-84 - - - L - - - RelB antitoxin
GDEDEPGN_00127 1.51e-168 cobQ - - S ko:K07009 - ko00000 glutamine amidotransferase
GDEDEPGN_00128 4.26e-108 - - - M - - - NlpC/P60 family
GDEDEPGN_00130 1.48e-84 - - - L - - - Transposase and inactivated derivatives, IS30 family
GDEDEPGN_00131 0.0 mngB 3.2.1.170 GH38 G ko:K15524 - ko00000,ko01000 Glycosyl hydrolases family 38 N-terminal domain
GDEDEPGN_00132 2.75e-43 - - - G ko:K03491 - ko00000,ko03000 Mga helix-turn-helix domain
GDEDEPGN_00133 2.32e-313 brnQ - - U ko:K03311 - ko00000 Component of the transport system for branched-chain amino acids
GDEDEPGN_00134 0.0 - - - L - - - Plasmid pRiA4b ORF-3-like protein
GDEDEPGN_00135 9.48e-204 - - - S - - - EDD domain protein, DegV family
GDEDEPGN_00136 2.06e-88 - - - - - - - -
GDEDEPGN_00137 0.0 FbpA - - K - - - Fibronectin-binding protein
GDEDEPGN_00138 6.15e-36 - - - - - - - -
GDEDEPGN_00139 5.31e-149 rsmC 2.1.1.172 - J ko:K00564 - ko00000,ko01000,ko03009 Methyltransferase
GDEDEPGN_00140 3.64e-188 - 2.1.1.172 - J ko:K00564,ko:K10716 - ko00000,ko01000,ko02000,ko03009 Ion channel
GDEDEPGN_00141 1.61e-72 rplL - - J ko:K02935 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
GDEDEPGN_00142 3.72e-111 rplJ - - J ko:K02864 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
GDEDEPGN_00144 1.41e-87 - - - V - - - HNH endonuclease
GDEDEPGN_00146 6.65e-179 puuD - - S ko:K07010 - ko00000,ko01002 peptidase C26
GDEDEPGN_00147 6.45e-291 - - - E - - - amino acid
GDEDEPGN_00148 5.22e-05 - - - - - - - -
GDEDEPGN_00149 2.75e-96 - 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 UbiA prenyltransferase family
GDEDEPGN_00150 3.74e-125 - - - - - - - -
GDEDEPGN_00151 5.34e-143 crt 4.2.1.17 - I ko:K01715 ko00650,ko01200,map00650,map01200 ko00000,ko00001,ko01000 Enoyl-CoA hydratase/isomerase
GDEDEPGN_00152 5.89e-192 fabK 1.3.1.9 - S ko:K02371 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Nitronate monooxygenase
GDEDEPGN_00153 4.7e-183 pct 2.8.3.1 - I ko:K01026 ko00620,ko00640,ko00643,ko01100,ko01120,map00620,map00640,map00643,map01100,map01120 ko00000,ko00001,ko01000 Coenzyme A transferase
GDEDEPGN_00154 2.63e-50 - - - - - - - -
GDEDEPGN_00155 1.25e-143 - - - K - - - WHG domain
GDEDEPGN_00156 3.41e-125 azo1 1.5.1.36, 1.7.1.6 - S ko:K03206,ko:K19784,ko:K22393 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 NADPH-dependent FMN reductase
GDEDEPGN_00157 2.58e-126 azr 1.5.1.36 - S ko:K22394 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 NADPH-dependent FMN reductase
GDEDEPGN_00158 9.48e-194 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
GDEDEPGN_00159 5.24e-230 apbE 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
GDEDEPGN_00160 2.99e-75 cvpA - - S - - - Colicin V production protein
GDEDEPGN_00161 3.66e-166 rsmG 2.1.1.170 - J ko:K03501 - ko00000,ko01000,ko03009,ko03036 Specifically methylates the N7 position of a guanine in 16S rRNA
GDEDEPGN_00162 5.86e-191 noc - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
GDEDEPGN_00163 4.99e-178 soj - - D ko:K03496 - ko00000,ko03036,ko04812 Sporulation initiation inhibitor
GDEDEPGN_00164 4.28e-197 spo0J - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
GDEDEPGN_00165 1.1e-59 yyzM - - S - - - Bacterial protein of unknown function (DUF951)
GDEDEPGN_00166 6.88e-257 ychF - - J ko:K06942 - ko00000,ko03009 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
GDEDEPGN_00167 3.93e-176 - - - S - - - Protein of unknown function (DUF1129)
GDEDEPGN_00168 1.22e-190 - - - V ko:K06147,ko:K06148 - ko00000,ko02000 ABC transporter, ATP-binding protein
GDEDEPGN_00169 1.68e-179 - - - V ko:K06147,ko:K06148 - ko00000,ko02000 ABC transporter, ATP-binding protein
GDEDEPGN_00170 0.0 ndvA - - V ko:K06147 - ko00000,ko02000 ABC transporter
GDEDEPGN_00172 8.32e-157 vanR - - K - - - response regulator
GDEDEPGN_00173 9.28e-271 - - - T - - - His Kinase A (phosphoacceptor) domain
GDEDEPGN_00174 0.0 murE 6.3.2.13, 6.3.2.7 - M ko:K01928,ko:K05362 ko00300,ko00550,ko01100,map00300,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GDEDEPGN_00175 7.79e-186 racD 5.1.1.13 - M ko:K01779 ko00250,ko01054,map00250,map01054 ko00000,ko00001,ko01000 Belongs to the aspartate glutamate racemases family
GDEDEPGN_00176 6.94e-70 - - - S - - - Enterocin A Immunity
GDEDEPGN_00177 1.95e-45 - - - - - - - -
GDEDEPGN_00178 1.07e-35 - - - - - - - -
GDEDEPGN_00179 4.48e-34 - - - - - - - -
GDEDEPGN_00180 0.0 glcD 1.1.3.15 - C ko:K00104 ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130 ko00000,ko00001,ko01000 FAD linked oxidases, C-terminal domain
GDEDEPGN_00181 0.0 agl 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 31 family
GDEDEPGN_00182 0.0 - - - S ko:K06921 - ko00000 Archaea bacterial proteins of unknown function
GDEDEPGN_00183 1.89e-23 - - - - - - - -
GDEDEPGN_00184 7.34e-178 - 2.7.13.3 - T ko:K07706 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 GHKL domain
GDEDEPGN_00185 2.08e-164 - - - K ko:K07707 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko02022 LytTr DNA-binding domain
GDEDEPGN_00186 0.0 comA - - V ko:K06147,ko:K06148,ko:K12292,ko:K20344 ko02010,ko02020,ko02024,map02010,map02020,map02024 ko00000,ko00001,ko01000,ko02000 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
GDEDEPGN_00187 4.85e-122 mesE - - M ko:K12293,ko:K20345 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko02000 Transport protein ComB
GDEDEPGN_00188 5.02e-180 blpT - - - - - - -
GDEDEPGN_00192 7.87e-30 - - - - - - - -
GDEDEPGN_00193 4.74e-107 - - - - - - - -
GDEDEPGN_00194 6.32e-42 - - - K ko:K07727 - ko00000,ko03000 Transcriptional regulator
GDEDEPGN_00195 2.52e-32 - - - - - - - -
GDEDEPGN_00196 3.41e-88 - - - - - - - -
GDEDEPGN_00197 3.09e-212 natA - - S ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
GDEDEPGN_00198 6.39e-279 natB - - CP ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
GDEDEPGN_00199 3.14e-175 fruR - - K ko:K03436 - ko00000,ko03000 DeoR C terminal sensor domain
GDEDEPGN_00200 2.18e-215 pfkB 2.7.1.56 - H ko:K00882 ko00051,map00051 ko00000,ko00001,ko01000 Belongs to the carbohydrate kinase PfkB family. LacC subfamily
GDEDEPGN_00201 0.0 fruA 2.7.1.202 - GT ko:K02768,ko:K02769,ko:K02770 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphotransferase System
GDEDEPGN_00202 4.47e-56 - - - K ko:K21903 - ko00000,ko03000 helix_turn_helix, Arsenical Resistance Operon Repressor
GDEDEPGN_00203 2.43e-209 - - - P ko:K02077 - ko00000,ko00002,ko02000 Belongs to the bacterial solute-binding protein 9 family
GDEDEPGN_00204 1.63e-152 adcC - - P ko:K02074,ko:K09817,ko:K11710 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
GDEDEPGN_00205 1.59e-172 znuB - - U ko:K02075,ko:K09816 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC 3 transport family
GDEDEPGN_00206 1.64e-45 - - - - - - - -
GDEDEPGN_00207 3.31e-154 - - - K - - - helix_turn_helix, mercury resistance
GDEDEPGN_00208 3.82e-294 pbuG - - S ko:K06901 - ko00000,ko02000 permease
GDEDEPGN_00209 5.12e-242 asnA 6.3.1.1 - F ko:K01914 ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230 ko00000,ko00001,ko01000 aspartate--ammonia ligase
GDEDEPGN_00210 1.84e-263 - 4.2.1.126 - S ko:K07106,ko:K09963 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Bacterial protein of unknown function (DUF871)
GDEDEPGN_00215 4.73e-32 - - - S - - - Domain of unknown function (DUF4417)
GDEDEPGN_00216 2.72e-05 - - - M ko:K11021 - ko00000,ko02042 COG3209 Rhs family protein
GDEDEPGN_00218 8.25e-16 - - - S - - - Protein conserved in bacteria
GDEDEPGN_00219 4.26e-27 - - - E - - - Pfam:DUF955
GDEDEPGN_00220 7.57e-190 - - - S ko:K09704 - ko00000 Metal-independent alpha-mannosidase (GH125)
GDEDEPGN_00222 1.91e-233 manA 5.3.1.8 - G ko:K01809 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 mannose-6-phosphate isomerase
GDEDEPGN_00223 1.05e-176 - - - F - - - Phosphorylase superfamily
GDEDEPGN_00224 6.64e-185 - - - F - - - Phosphorylase superfamily
GDEDEPGN_00225 2.16e-193 - 2.3.1.81 - V ko:K00662 - ko00000,ko01000,ko01504 Aminoglycoside 3-N-acetyltransferase
GDEDEPGN_00226 2.05e-96 - 2.7.13.3 - T ko:K07706 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 GHKL domain
GDEDEPGN_00227 7.12e-100 - - - K ko:K07707 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko02022 LytTr DNA-binding domain
GDEDEPGN_00228 1.87e-104 comA - - V ko:K06147,ko:K06148,ko:K12292,ko:K20344 ko02010,ko02020,ko02024,map02010,map02020,map02024 ko00000,ko00001,ko01000,ko02000 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
GDEDEPGN_00229 3.98e-97 - - - M - - - LysM domain
GDEDEPGN_00230 3.3e-42 - - - - - - - -
GDEDEPGN_00232 8.6e-128 ltrA - - S - - - Bacterial low temperature requirement A protein (LtrA)
GDEDEPGN_00233 1.28e-168 - - - L - - - PFAM transposase IS116 IS110 IS902
GDEDEPGN_00234 1.08e-69 - - - L - - - Transposase and inactivated derivatives
GDEDEPGN_00235 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
GDEDEPGN_00236 5.41e-172 cysA - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
GDEDEPGN_00237 2.1e-31 - - - - - - - -
GDEDEPGN_00238 1.69e-06 - - - - - - - -
GDEDEPGN_00239 0.0 pepD2 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
GDEDEPGN_00240 1.72e-228 ftsY - - U ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
GDEDEPGN_00241 0.0 smc - - D ko:K03529 - ko00000,ko03036 Required for chromosome condensation and partitioning
GDEDEPGN_00242 2.8e-160 rnc 3.1.26.3 - J ko:K03685 ko03008,ko05205,map03008,map05205 ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
GDEDEPGN_00243 0.0 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
GDEDEPGN_00244 4.14e-154 oppC5 - - P ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDEDEPGN_00245 1.49e-225 oppB - - P ko:K02033,ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
GDEDEPGN_00246 4.31e-231 oppF - - P ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
GDEDEPGN_00247 5.15e-247 oppD - - P ko:K02031,ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
GDEDEPGN_00248 4.4e-47 acpP - - IQ ko:K02078 - ko00000,ko00001 Carrier of the growing fatty acid chain in fatty acid biosynthesis
GDEDEPGN_00249 3.69e-233 plsX 2.3.1.15 - I ko:K03621 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
GDEDEPGN_00250 0.0 recG 3.6.4.12 - L ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
GDEDEPGN_00251 0.0 yloV - - S ko:K07030 - ko00000 DAK2 domain fusion protein YloV
GDEDEPGN_00252 8.29e-75 yloU - - S - - - Asp23 family, cell envelope-related function
GDEDEPGN_00253 1.33e-35 rpmB - - J ko:K02902 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL28 family
GDEDEPGN_00254 2.29e-41 - - - - - - - -
GDEDEPGN_00255 9.44e-161 thiN 2.7.6.2 - H ko:K00949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 thiamine pyrophosphokinase
GDEDEPGN_00256 7.49e-154 rpe 5.1.3.1 - G ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the ribulose-phosphate 3-epimerase family
GDEDEPGN_00257 1.71e-208 rsgA 3.1.3.100 - S ko:K06949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
GDEDEPGN_00258 0.0 prkC 2.7.11.1 - KLT ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 serine threonine protein kinase
GDEDEPGN_00259 3.28e-179 stp 3.1.3.16 - T ko:K20074 - ko00000,ko01000,ko01009 phosphatase
GDEDEPGN_00260 1.84e-309 sun 2.1.1.176 - J ko:K03500 - ko00000,ko01000,ko03009 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
GDEDEPGN_00261 5.15e-219 fmt 2.1.2.9 - J ko:K00604 ko00670,ko00970,map00670,map00970 ko00000,ko00001,ko01000 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
GDEDEPGN_00262 0.0 priA - - L ko:K04066 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GDEDEPGN_00263 2.37e-46 rpoZ 2.7.7.6 - K ko:K03060 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
GDEDEPGN_00264 5.97e-145 gmk 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Essential for recycling GMP and indirectly, cGMP
GDEDEPGN_00265 2.19e-100 - - - S - - - ASCH
GDEDEPGN_00266 0.0 recN - - L ko:K03631 - ko00000,ko03400 May be involved in recombinational repair of damaged DNA
GDEDEPGN_00267 7.22e-197 rrmJ 2.1.1.226, 2.1.1.227 - J ko:K06442 - ko00000,ko01000,ko03009 Ribosomal RNA large subunit methyltransferase J
GDEDEPGN_00268 6.44e-205 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29 - H ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the FPP GGPP synthase family
GDEDEPGN_00269 1.53e-47 xseB 3.1.11.6 - L ko:K03602 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GDEDEPGN_00270 1.97e-248 xseA 3.1.11.6 - L ko:K03601 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GDEDEPGN_00271 7.19e-199 folD 1.5.1.5, 3.5.4.9 - F ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
GDEDEPGN_00272 2.78e-85 nusB - - K ko:K03625 - ko00000,ko03009,ko03021 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GDEDEPGN_00273 7.98e-93 WQ51_04310 - - S ko:K10947 - ko00000,ko03000 Asp23 family, cell envelope-related function
GDEDEPGN_00274 2.11e-133 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GDEDEPGN_00275 2.14e-257 pepP 3.4.11.9, 3.4.13.9 - E ko:K01262,ko:K01271 - ko00000,ko01000,ko01002 Creatinase/Prolidase N-terminal domain
GDEDEPGN_00276 3.94e-64 rpmA - - J ko:K02899 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL27 family
GDEDEPGN_00277 6.82e-66 rplU - - J ko:K02888 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to 23S rRNA in the presence of protein L20
GDEDEPGN_00278 5.24e-194 - - - S - - - Uncharacterised 5xTM membrane BCR, YitT family COG1284
GDEDEPGN_00279 0.0 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2325)
GDEDEPGN_00280 0.0 cas9 - - L ko:K09952 - ko00000,ko01000,ko02048 CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
GDEDEPGN_00281 0.0 - - - S - - - Predicted membrane protein (DUF2207)
GDEDEPGN_00282 2.07e-38 dmpI 5.3.2.6 - G ko:K01821 ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220 ko00000,ko00001,ko00002,ko01000 Belongs to the 4-oxalocrotonate tautomerase family
GDEDEPGN_00284 0.0 lctP - - C ko:K03303 - ko00000,ko02000 L-lactate permease
GDEDEPGN_00285 4.52e-29 - - - K - - - Transcriptional regulator
GDEDEPGN_00286 2.14e-48 - - - - - - - -
GDEDEPGN_00287 1.14e-208 - - - K ko:K03484 - ko00000,ko03000 Periplasmic binding protein domain
GDEDEPGN_00288 5.69e-179 msmE - - G ko:K10117 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDEDEPGN_00289 2.18e-51 - - - K - - - Helix-turn-helix domain
GDEDEPGN_00290 4.82e-144 - - - K - - - Helix-turn-helix XRE-family like proteins
GDEDEPGN_00293 2.61e-30 - - - - - - - -
GDEDEPGN_00294 8.99e-59 yxaM - - EGP - - - Major facilitator Superfamily
GDEDEPGN_00295 1.5e-150 - - - S - - - F420-0:Gamma-glutamyl ligase
GDEDEPGN_00296 1.83e-103 - - - S - - - AAA domain
GDEDEPGN_00297 9.82e-80 - - - F - - - NUDIX domain
GDEDEPGN_00298 2e-299 cls - - I ko:K06131 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GDEDEPGN_00299 1.23e-125 XK27_05225 - - S - - - Tetratricopeptide repeat protein
GDEDEPGN_00300 4.01e-84 XK27_01125 - - L ko:K07484 - ko00000 PFAM IS66 Orf2 family protein
GDEDEPGN_00301 5.51e-46 - - - S - - - Transposase C of IS166 homeodomain
GDEDEPGN_00302 1.28e-311 - - - L ko:K07484 - ko00000 Transposase IS66 family
GDEDEPGN_00303 7.23e-50 - - - S ko:K11621 ko02020,map02020 ko00000,ko00001 Putative adhesin
GDEDEPGN_00304 1.8e-222 - - - V - - - ABC transporter transmembrane region
GDEDEPGN_00305 0.0 celD - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GDEDEPGN_00306 2.92e-79 - - - - - - - -
GDEDEPGN_00307 2.71e-222 - - - EGP ko:K08368 - ko00000,ko02000 Sugar (and other) transporter
GDEDEPGN_00308 6.46e-27 - - - - - - - -
GDEDEPGN_00309 1.12e-268 - - - - - - - -
GDEDEPGN_00310 6.57e-175 - - - S - - - SLAP domain
GDEDEPGN_00311 1.14e-154 - - - S - - - SLAP domain
GDEDEPGN_00312 1.06e-133 - - - S - - - Bacteriocin helveticin-J
GDEDEPGN_00313 2.35e-58 - - - - - - - -
GDEDEPGN_00314 8.29e-76 - - - K - - - Helix-turn-helix XRE-family like proteins
GDEDEPGN_00315 1.98e-41 - - - E - - - Zn peptidase
GDEDEPGN_00316 0.0 eriC - - P ko:K03281 - ko00000 chloride
GDEDEPGN_00317 0.0 gnd 1.1.1.343, 1.1.1.44 - H ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
GDEDEPGN_00318 5.38e-39 - - - - - - - -
GDEDEPGN_00319 0.0 pox1 1.2.3.3 - EH ko:K00158 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000 Belongs to the TPP enzyme family
GDEDEPGN_00320 0.0 gidA - - D ko:K03495 - ko00000,ko03016,ko03036 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
GDEDEPGN_00321 0.0 mnmE - - S ko:K03650 - ko00000,ko01000,ko03016 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
GDEDEPGN_00322 3.37e-192 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
GDEDEPGN_00323 2.65e-81 rnpA 3.1.26.5 - J ko:K03536 - ko00000,ko01000,ko03016 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
GDEDEPGN_00324 3.26e-23 rpmH - - J ko:K02914 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL34 family
GDEDEPGN_00325 6.57e-253 - - - L - - - Transposase and inactivated derivatives, IS30 family
GDEDEPGN_00326 9.14e-317 dnaA - - L ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GDEDEPGN_00327 8.11e-245 dnaN 2.7.7.7 - L ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
GDEDEPGN_00328 1.13e-48 yaaA - - S ko:K14761 - ko00000,ko03009 S4 domain protein YaaA
GDEDEPGN_00329 4.22e-267 recF - - L ko:K03629 ko03440,map03440 ko00000,ko00001,ko03400 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
GDEDEPGN_00330 0.0 gyrB 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GDEDEPGN_00331 0.0 gyrA 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GDEDEPGN_00332 6.72e-66 rpsF - - J ko:K02990 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Binds together with S18 to 16S ribosomal RNA
GDEDEPGN_00333 4.83e-104 ssb - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
GDEDEPGN_00334 1.89e-47 rpsR - - J ko:K02963 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
GDEDEPGN_00335 0.0 yybT - - T - - - signaling protein consisting of a modified GGDEF domain and a DHH domain
GDEDEPGN_00336 3.87e-97 rplI - - J ko:K02939 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
GDEDEPGN_00337 0.0 dnaB 3.6.4.12 - L ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Participates in initiation and elongation during chromosome replication
GDEDEPGN_00338 5.56e-217 phnD - - P ko:K02044 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, phosphonate, periplasmic substrate-binding protein
GDEDEPGN_00339 2.26e-215 degV1 - - S - - - DegV family
GDEDEPGN_00340 1.23e-170 - - - V - - - ABC transporter transmembrane region
GDEDEPGN_00341 4.76e-213 scrK 2.7.1.4 - GK ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 ko00000,ko00001,ko01000 ROK family
GDEDEPGN_00342 3.81e-18 - - - S - - - CsbD-like
GDEDEPGN_00343 2.26e-31 - - - S - - - Transglycosylase associated protein
GDEDEPGN_00344 1.37e-287 - - - I - - - Protein of unknown function (DUF2974)
GDEDEPGN_00345 3.92e-153 - - - S ko:K07507 - ko00000,ko02000 MgtC family
GDEDEPGN_00347 6.48e-167 - - - K - - - Helix-turn-helix XRE-family like proteins
GDEDEPGN_00348 4.95e-98 - - - - - - - -
GDEDEPGN_00349 6.59e-115 - - - - - - - -
GDEDEPGN_00350 1.12e-213 - - - EGP - - - Major Facilitator
GDEDEPGN_00351 1.66e-44 - - - K - - - Transcriptional regulator
GDEDEPGN_00352 5.52e-49 - 3.1.21.3 - V ko:K01154 - ko00000,ko01000,ko02048 Type I restriction modification DNA specificity domain
GDEDEPGN_00353 3.01e-73 - - - - - - - -
GDEDEPGN_00354 2.31e-77 - - - GK - - - ROK family
GDEDEPGN_00355 5.01e-55 ybhL - - S ko:K06890 - ko00000 Belongs to the BI1 family
GDEDEPGN_00356 4.39e-268 - - - S ko:K09963 - ko00000 Bacterial protein of unknown function (DUF871)
GDEDEPGN_00357 9e-132 - - - L - - - Integrase
GDEDEPGN_00358 1.64e-90 - - - T ko:K07171 - ko00000,ko01000,ko02048 Toxin-antitoxin system, toxin component, MazF family
GDEDEPGN_00359 5.32e-42 - - - - ko:K18829 - ko00000,ko02048 -
GDEDEPGN_00360 1.28e-162 sagD - - S - - - YcaO cyclodehydratase, ATP-ad Mg2+-binding
GDEDEPGN_00362 8.08e-108 - - - S - - - PFAM Archaeal ATPase
GDEDEPGN_00363 1.32e-105 - - - S - - - PFAM Archaeal ATPase
GDEDEPGN_00364 7.02e-36 - - - - - - - -
GDEDEPGN_00365 2.78e-70 - 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 UbiA prenyltransferase family
GDEDEPGN_00366 2.58e-45 - - - - - - - -
GDEDEPGN_00367 7.14e-91 - - - EGP - - - Major Facilitator
GDEDEPGN_00368 9.13e-157 - - - L - - - PFAM transposase IS116 IS110 IS902
GDEDEPGN_00369 1.27e-42 - - - K - - - Bacterial regulatory helix-turn-helix protein, lysR family
GDEDEPGN_00371 2.99e-114 tpx 1.11.1.15 - O ko:K11065 - ko00000,ko01000 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
GDEDEPGN_00372 5.51e-35 - - - - - - - -
GDEDEPGN_00373 8.71e-31 - - - G - - - Ribose/Galactose Isomerase
GDEDEPGN_00374 6.13e-70 - - - K - - - sequence-specific DNA binding
GDEDEPGN_00375 5.97e-55 - - - S - - - SnoaL-like domain
GDEDEPGN_00376 0.0 - - - L - - - PLD-like domain
GDEDEPGN_00377 6.83e-133 yrgI 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Histidine phosphatase superfamily (branch 1)
GDEDEPGN_00378 0.0 lysC 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the aspartokinase family
GDEDEPGN_00379 0.0 thrC 4.2.3.1 - E ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Threonine synthase
GDEDEPGN_00380 2.95e-283 hom 1.1.1.3 - E ko:K00003 ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 homoserine dehydrogenase
GDEDEPGN_00381 3.06e-202 thrB 2.7.1.39 - F ko:K00872 ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
GDEDEPGN_00382 3.06e-140 - - - - - - - -
GDEDEPGN_00383 2.83e-205 yitT - - S - - - Uncharacterised 5xTM membrane BCR, YitT family COG1284
GDEDEPGN_00385 4.88e-12 msrA 1.8.4.11, 1.8.4.12 - O ko:K07304,ko:K12267 - ko00000,ko01000 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GDEDEPGN_00386 6.69e-155 - - - L - - - Belongs to the 'phage' integrase family
GDEDEPGN_00388 1.64e-73 - - - V - - - Abi-like protein
GDEDEPGN_00389 8.17e-84 - - - K - - - Peptidase S24-like
GDEDEPGN_00396 2.38e-28 - - - L - - - Psort location Cytoplasmic, score
GDEDEPGN_00400 1.75e-104 - - - L - - - Belongs to the 'phage' integrase family
GDEDEPGN_00401 2.73e-103 - - - V - - - site-specific DNA-methyltransferase (adenine-specific) activity
GDEDEPGN_00404 1.85e-12 - - - - - - - -
GDEDEPGN_00405 3.93e-20 - - - S - - - HNH endonuclease
GDEDEPGN_00414 3.49e-48 - - - L - - - HNH endonuclease
GDEDEPGN_00416 0.000922 - - - S - - - Phage terminase, small subunit
GDEDEPGN_00417 2.77e-220 terL - - S - - - overlaps another CDS with the same product name
GDEDEPGN_00419 5.61e-125 - - - S - - - Phage portal protein
GDEDEPGN_00420 2.3e-70 - - - OU - - - Belongs to the peptidase S14 family
GDEDEPGN_00421 5.72e-108 - - - S - - - Phage capsid family
GDEDEPGN_00424 9.66e-39 - - - S - - - Bacteriophage HK97-gp10, putative tail-component
GDEDEPGN_00429 1.9e-185 - - - D - - - domain protein
GDEDEPGN_00430 3.24e-290 - - - L - - - COG3547 Transposase and inactivated derivatives
GDEDEPGN_00431 1.44e-07 - - - S - - - YSIRK type signal peptide
GDEDEPGN_00433 3.52e-296 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2325)
GDEDEPGN_00434 7.55e-53 - - - S - - - Transglycosylase associated protein
GDEDEPGN_00435 7.7e-126 - - - L - - - Helix-turn-helix domain
GDEDEPGN_00436 1.7e-69 coaD 2.7.7.3 - H ko:K00954 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
GDEDEPGN_00437 1.22e-98 - - - S - - - ECF transporter, substrate-specific component
GDEDEPGN_00439 2.15e-127 - - - L - - - Helix-turn-helix domain
GDEDEPGN_00440 1.31e-231 - - - S ko:K07133 - ko00000 cog cog1373
GDEDEPGN_00441 3.74e-180 - - - L - - - Transposase DDE domain
GDEDEPGN_00442 2.37e-190 - - - U ko:K05340 - ko00000,ko02000 sugar transport
GDEDEPGN_00444 6.94e-54 - - - S - - - VRR_NUC
GDEDEPGN_00446 4.36e-272 XK27_11280 - - S - - - Psort location CytoplasmicMembrane, score
GDEDEPGN_00451 1.97e-88 - 2.1.1.72 - V ko:K03427 - ko00000,ko01000,ko02048 site-specific DNA-methyltransferase (adenine-specific) activity
GDEDEPGN_00452 1.75e-20 bcgIA 2.1.1.72 - V ko:K03427 - ko00000,ko01000,ko02048 site-specific DNA-methyltransferase (adenine-specific) activity
GDEDEPGN_00454 2.92e-26 - - - L ko:K07474 - ko00000 Terminase small subunit
GDEDEPGN_00455 1.36e-248 - - - S - - - Terminase-like family
GDEDEPGN_00456 4.55e-138 - - - S ko:K09961 - ko00000 Protein of unknown function (DUF1073)
GDEDEPGN_00457 4.88e-85 - - - S - - - Phage Mu protein F like protein
GDEDEPGN_00458 4.13e-28 - - - S - - - Lysin motif
GDEDEPGN_00459 2.04e-78 - - - S ko:K09960 - ko00000 Uncharacterized protein conserved in bacteria (DUF2213)
GDEDEPGN_00460 8.2e-45 - - - - - - - -
GDEDEPGN_00463 9.75e-36 - - - - - - - -
GDEDEPGN_00466 4.04e-147 - - - S - - - Protein of unknown function (DUF3383)
GDEDEPGN_00470 6.98e-273 - - - L - - - Phage tail tape measure protein TP901
GDEDEPGN_00471 4.47e-105 - - - M - - - LysM domain
GDEDEPGN_00472 9.3e-57 - - - - - - - -
GDEDEPGN_00473 1.43e-143 - - - - - - - -
GDEDEPGN_00474 1.61e-58 - - - - - - - -
GDEDEPGN_00476 2.46e-207 - - - S - - - Baseplate J-like protein
GDEDEPGN_00478 6.65e-45 - - - - - - - -
GDEDEPGN_00479 1.51e-76 - - - - - - - -
GDEDEPGN_00483 6.01e-66 - - - - - - - -
GDEDEPGN_00489 1.14e-28 - - - - - - - -
GDEDEPGN_00501 1.72e-286 - 2.4.1.337 GT4 M ko:K19002 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000,ko01003 Glycosyl transferase 4-like domain
GDEDEPGN_00502 9.03e-257 cpoA 2.4.1.208 GT4 M ko:K13677,ko:K13678 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000,ko01003 Glycosyltransferase, group 1 family protein
GDEDEPGN_00503 2.91e-217 mprF - - S ko:K07027 - ko00000,ko02000 Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
GDEDEPGN_00504 6.59e-160 - - - S - - - Protein of unknown function (DUF1275)
GDEDEPGN_00505 3.01e-210 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
GDEDEPGN_00506 1.55e-09 - - - S - - - Protein of unknown function (DUF3290)
GDEDEPGN_00507 3.85e-180 pnuC - - H ko:K03811 - ko00000,ko02000 nicotinamide mononucleotide transporter
GDEDEPGN_00508 1.29e-115 - - - EGP - - - Major Facilitator
GDEDEPGN_00509 1.26e-62 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
GDEDEPGN_00510 5.98e-119 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
GDEDEPGN_00511 4.3e-175 - - - S - - - Alpha/beta hydrolase family
GDEDEPGN_00512 3.1e-155 - - - L - - - DDE superfamily endonuclease
GDEDEPGN_00513 8.77e-102 comA - - V ko:K06147,ko:K06148,ko:K12292,ko:K20344 ko02010,ko02020,ko02024,map02010,map02020,map02024 ko00000,ko00001,ko01000,ko02000 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
GDEDEPGN_00515 3.1e-92 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
GDEDEPGN_00516 2.86e-287 thiI 2.8.1.4 - H ko:K03151 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GDEDEPGN_00517 3.52e-272 iscS2 2.8.1.7 - E ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Aminotransferase class V
GDEDEPGN_00518 0.0 ezrA - - D ko:K06286 - ko00000,ko03036 modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
GDEDEPGN_00519 3.07e-142 rpsD - - J ko:K02986 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
GDEDEPGN_00520 8.08e-110 - - - S - - - Protein of unknown function (DUF1694)
GDEDEPGN_00521 1.47e-302 rarA - - L ko:K07478 - ko00000 recombination factor protein RarA
GDEDEPGN_00522 1.35e-56 - - - - - - - -
GDEDEPGN_00523 9.45e-104 uspA - - T - - - universal stress protein
GDEDEPGN_00524 1.18e-275 rodA - - D ko:K05837 - ko00000,ko03036 Belongs to the SEDS family
GDEDEPGN_00525 5.13e-46 - - - S - - - Protein of unknown function (DUF2969)
GDEDEPGN_00526 1.59e-68 ytjA - - S ko:K08998 - ko00000 Could be involved in insertion of integral membrane proteins into the membrane
GDEDEPGN_00527 4.81e-227 mbl - - D ko:K03569 - ko00000,ko02048,ko03036,ko04812 Cell shape determining protein MreB Mrl
GDEDEPGN_00528 2.54e-42 - - - S - - - Protein of unknown function (DUF1146)
GDEDEPGN_00529 2.45e-93 atpC - - C ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane
GDEDEPGN_00530 0.0 atpD 3.6.3.14 - C ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
GDEDEPGN_00531 1.48e-221 atpG - - C ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
GDEDEPGN_00532 0.0 atpA 3.6.3.14 - C ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
GDEDEPGN_00533 6.55e-120 atpH - - C ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GDEDEPGN_00534 2.48e-83 atpF - - C ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
GDEDEPGN_00535 4.83e-37 atpE - - C ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GDEDEPGN_00536 5.87e-166 atpB - - C ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko03110 it plays a direct role in the translocation of protons across the membrane
GDEDEPGN_00537 5.28e-146 upp 2.4.2.9 - F ko:K00761 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
GDEDEPGN_00538 1.66e-243 ywlC 2.7.7.87 - J ko:K07566 - ko00000,ko01000,ko03009,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
GDEDEPGN_00539 1.24e-198 prmC 2.1.1.297 - J ko:K02493 - ko00000,ko01000,ko03012 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
GDEDEPGN_00540 6.6e-237 prfA - - J ko:K02835 - ko00000,ko03012 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
GDEDEPGN_00541 7.02e-146 tdk 2.7.1.21 - F ko:K00857 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 thymidine kinase
GDEDEPGN_00542 0.0 murE2 6.3.2.13 - M ko:K01928 ko00300,ko00550,map00300,map00550 ko00000,ko00001,ko01000,ko01011 Domain of unknown function (DUF1727)
GDEDEPGN_00545 7.95e-250 ampC - - V - - - Beta-lactamase
GDEDEPGN_00546 3.26e-274 - - - EGP - - - Major Facilitator
GDEDEPGN_00547 0.0 pgi 5.3.1.9 - G ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GPI family
GDEDEPGN_00548 5.3e-137 vanZ - - V - - - VanZ like family
GDEDEPGN_00549 0.0 ltaS 2.7.8.20 - M ko:K19005 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
GDEDEPGN_00550 0.0 yclK - - T - - - Histidine kinase
GDEDEPGN_00551 4.96e-167 - - - K - - - Transcriptional regulatory protein, C terminal
GDEDEPGN_00552 9.01e-90 - - - S - - - SdpI/YhfL protein family
GDEDEPGN_00553 1.93e-242 manA 5.3.1.8 - G ko:K01809 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 mannose-6-phosphate isomerase
GDEDEPGN_00554 1.72e-288 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I
GDEDEPGN_00555 1.72e-127 - - - M - - - Protein of unknown function (DUF3737)
GDEDEPGN_00557 1e-22 - - - S - - - Domain of Unknown Function with PDB structure (DUF3850)
GDEDEPGN_00558 1.07e-153 yjhB 3.6.1.13 - F ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 NUDIX domain
GDEDEPGN_00560 2.84e-108 - - - K - - - FR47-like protein
GDEDEPGN_00561 3.24e-112 yxaM - - EGP - - - Major facilitator Superfamily
GDEDEPGN_00562 6.13e-110 - - - K - - - Acetyltransferase (GNAT) domain
GDEDEPGN_00564 8.89e-57 sagB - - C - - - Nitroreductase family
GDEDEPGN_00565 4.34e-166 - - - S - - - Peptidase family M23
GDEDEPGN_00566 5.37e-106 - 3.6.1.55 - F ko:K03574 - ko00000,ko01000,ko03400 NUDIX domain
GDEDEPGN_00567 2.8e-159 trmK 2.1.1.217 - S ko:K06967 - ko00000,ko01000,ko03016 SAM-dependent methyltransferase
GDEDEPGN_00568 8.12e-196 yqfO - - S - - - Belongs to the GTP cyclohydrolase I type 2 NIF3 family
GDEDEPGN_00569 3.02e-151 pepT 3.4.11.4 - E ko:K01258 - ko00000,ko01000,ko01002 Cleaves the N-terminal amino acid of tripeptides
GDEDEPGN_00570 4.97e-122 pepT 3.4.11.4 - E ko:K01258 - ko00000,ko01000,ko01002 Cleaves the N-terminal amino acid of tripeptides
GDEDEPGN_00571 1.25e-80 lexA - - K ko:K07979 - ko00000,ko03000 Transcriptional regulator, GntR family
GDEDEPGN_00572 1.33e-161 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
GDEDEPGN_00573 1.65e-180 - - - - - - - -
GDEDEPGN_00574 2.54e-176 - - - - - - - -
GDEDEPGN_00575 3.85e-193 - - - - - - - -
GDEDEPGN_00576 3.49e-36 - - - - - - - -
GDEDEPGN_00577 1.27e-133 lepB 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
GDEDEPGN_00578 4.68e-183 - - - - - - - -
GDEDEPGN_00579 4.4e-215 - - - - - - - -
GDEDEPGN_00580 0.0 rsmF - - J - - - NOL1 NOP2 sun family protein
GDEDEPGN_00581 1.28e-150 - 3.1.3.102, 3.1.3.104, 3.1.3.23 - G ko:K07757,ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Sucrose-6F-phosphate phosphohydrolase
GDEDEPGN_00582 4.87e-236 fni 5.3.3.2 - C ko:K01823 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
GDEDEPGN_00583 6.67e-261 mvaK2 2.7.4.2 - I ko:K00938 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 phosphomevalonate kinase
GDEDEPGN_00584 5.87e-228 mvaD 4.1.1.33 - I ko:K01597 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 diphosphomevalonate decarboxylase
GDEDEPGN_00585 2.12e-173 mvk 2.7.1.36 - I ko:K00869 ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146 ko00000,ko00001,ko00002,ko01000 GHMP kinases N terminal domain
GDEDEPGN_00586 0.0 rexB 3.6.4.12 - L ko:K16899 - ko00000,ko01000,ko03400 The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
GDEDEPGN_00587 0.0 addA 3.6.4.12 - L ko:K16898 - ko00000,ko01000,ko03400 ATP-dependent helicase nuclease subunit A
GDEDEPGN_00588 0.0 dinG 3.6.4.12 - L ko:K03722 - ko00000,ko01000,ko03400 helicase involved in DNA repair and perhaps also replication
GDEDEPGN_00589 9.62e-116 ypmB - - S - - - Protein conserved in bacteria
GDEDEPGN_00590 0.0 asnS 6.1.1.22 - J ko:K01893 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Asparaginyl-tRNA synthetase
GDEDEPGN_00591 6.91e-149 dnaD - - L ko:K02086 - ko00000 DnaD domain protein
GDEDEPGN_00592 1.92e-148 nth 4.2.99.18 - L ko:K10773 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GDEDEPGN_00593 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M ko:K05366 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 penicillin-binding protein 1A
GDEDEPGN_00594 8.47e-152 recU - - L ko:K03700 - ko00000,ko03400 Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
GDEDEPGN_00595 1.18e-139 ypsA - - S - - - Belongs to the UPF0398 family
GDEDEPGN_00596 1.85e-90 gpsB - - D - - - Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
GDEDEPGN_00597 6.85e-277 ypsC - - L ko:K07444 - ko00000,ko01000 Belongs to the methyltransferase superfamily
GDEDEPGN_00598 6.74e-309 cpdA - - S - - - Calcineurin-like phosphoesterase
GDEDEPGN_00599 9.67e-104 - - - - - - - -
GDEDEPGN_00600 9.91e-150 - 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Ham1 family
GDEDEPGN_00601 9.23e-106 - - - L - - - PFAM Transposase DDE domain
GDEDEPGN_00602 2.09e-110 - - - - - - - -
GDEDEPGN_00604 3.35e-101 menA 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 UbiA prenyltransferase family
GDEDEPGN_00606 0.0 - 4.2.1.53 - S ko:K10254 - ko00000,ko01000 Myosin-crossreactive antigen
GDEDEPGN_00607 1.46e-117 - - - K - - - Bacterial regulatory proteins, tetR family
GDEDEPGN_00608 0.0 qacA - - EGP - - - Major Facilitator
GDEDEPGN_00613 1.42e-122 - - - K - - - Acetyltransferase (GNAT) domain
GDEDEPGN_00614 0.0 rumA_2 2.1.1.190 - J ko:K03215 - ko00000,ko01000,ko03009 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GDEDEPGN_00615 5.63e-254 flp - - V - - - Beta-lactamase
GDEDEPGN_00616 7.58e-291 nhaC - - C ko:K03315 - ko00000,ko02000 Na H antiporter NhaC
GDEDEPGN_00617 1.64e-65 - - - - - - - -
GDEDEPGN_00618 4.83e-144 ybhL - - S ko:K06890 - ko00000 Belongs to the BI1 family
GDEDEPGN_00619 4.45e-84 - - - K - - - transcriptional regulator
GDEDEPGN_00621 3.93e-219 dagK 2.7.1.107 - G ko:K07029 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko01000 Lipid kinase
GDEDEPGN_00622 0.0 gatB 6.3.5.6, 6.3.5.7 - J ko:K02434 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GDEDEPGN_00623 0.0 gatA 6.3.5.6, 6.3.5.7 - J ko:K02433 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
GDEDEPGN_00624 5.42e-67 gatC 6.3.5.6, 6.3.5.7 - J ko:K02435 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GDEDEPGN_00625 6.25e-268 camS - - S - - - sex pheromone
GDEDEPGN_00626 0.0 ligA 6.5.1.2 - L ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 ko00000,ko00001,ko01000,ko03032,ko03400 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
GDEDEPGN_00627 0.0 pcrA 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase
GDEDEPGN_00628 3.29e-127 acmA 3.2.1.17, 3.2.1.96 - NU ko:K01185,ko:K01227 ko00511,map00511 ko00000,ko00001,ko01000 mannosyl-glycoprotein
GDEDEPGN_00630 2.24e-110 ydcK - - S ko:K03095 - ko00000 Belongs to the SprT family
GDEDEPGN_00631 5.48e-173 - - - M - - - Glycosyltransferase sugar-binding region containing DXD motif
GDEDEPGN_00632 0.0 epsU - - S ko:K03328 - ko00000 Polysaccharide biosynthesis protein
GDEDEPGN_00633 9.16e-287 - - - M - - - CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
GDEDEPGN_00634 0.0 pacL 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
GDEDEPGN_00635 4e-260 tnpB - - L ko:K07496 - ko00000 Putative transposase DNA-binding domain
GDEDEPGN_00636 1.91e-195 nadE 6.3.1.5 - F ko:K01916 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
GDEDEPGN_00637 0.0 pncB 6.3.4.21 - F ko:K00763 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GDEDEPGN_00638 2.94e-261 - - - M - - - Glycosyl transferases group 1
GDEDEPGN_00639 2.13e-171 tagA 2.4.1.187 GT26 F ko:K05946 ko05111,map05111 ko00000,ko00001,ko01000,ko01003 Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
GDEDEPGN_00641 1.25e-17 - - - - - - - -
GDEDEPGN_00642 2.77e-220 pphA 3.1.3.16 - T ko:K07313 - ko00000,ko01000 Calcineurin-like phosphoesterase
GDEDEPGN_00643 1.04e-41 - - - - - - - -
GDEDEPGN_00645 3.65e-90 - - - S - - - Iron-sulphur cluster biosynthesis
GDEDEPGN_00646 1.08e-145 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
GDEDEPGN_00647 4.51e-77 psiE - - S ko:K13256 - ko00000 Phosphate-starvation-inducible E
GDEDEPGN_00649 6.58e-175 nfrA 1.5.1.38 - C ko:K19285 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 nitroreductase
GDEDEPGN_00650 1.49e-290 amt - - P ko:K03320 - ko00000,ko02000 ammonium transporter
GDEDEPGN_00651 7.82e-80 - - - - - - - -
GDEDEPGN_00652 0.0 - - - L ko:K03724 - ko00000,ko01000,ko03400 DEAD DEAH box helicase
GDEDEPGN_00653 4.13e-310 - - - P - - - P-loop Domain of unknown function (DUF2791)
GDEDEPGN_00654 0.0 - - - S - - - TerB-C domain
GDEDEPGN_00655 0.0 pckA 4.1.1.49 - H ko:K01610 ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Phosphoenolpyruvate carboxykinase
GDEDEPGN_00656 0.0 - - - V ko:K06147,ko:K06148 - ko00000,ko02000 ABC transporter transmembrane region
GDEDEPGN_00657 6.94e-202 - - - K - - - Helix-turn-helix XRE-family like proteins
GDEDEPGN_00658 9.05e-78 apfA 3.6.1.61 - F ko:K18445 ko00230,map00230 ko00000,ko00001,ko01000 Nudix hydrolase
GDEDEPGN_00659 3.36e-42 - - - - - - - -
GDEDEPGN_00660 2.53e-100 - 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Carboxymuconolactone decarboxylase family
GDEDEPGN_00661 5.26e-36 - 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Carboxymuconolactone decarboxylase family
GDEDEPGN_00662 2.7e-277 mtlD 1.1.1.17 - C ko:K00009 ko00051,map00051 ko00000,ko00001,ko01000 mannitol-1-phosphate 5-dehydrogenase activity
GDEDEPGN_00663 5.75e-103 mtlF 2.7.1.197 - G ko:K02798 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GDEDEPGN_00664 0.0 mtlA 2.7.1.197 - G ko:K02799,ko:K02800 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
GDEDEPGN_00665 0.0 mtlR - - K ko:K03483 - ko00000,ko03000 Mga helix-turn-helix domain
GDEDEPGN_00666 0.0 glmS 2.6.1.16 - M ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 ko00000,ko00001,ko01000,ko01002 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
GDEDEPGN_00667 1.14e-144 adhE 1.1.1.1, 1.2.1.10 - C ko:K04072 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 belongs to the iron- containing alcohol dehydrogenase family
GDEDEPGN_00668 0.0 adhE 1.1.1.1, 1.2.1.10 - C ko:K04072 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 belongs to the iron- containing alcohol dehydrogenase family
GDEDEPGN_00669 1.38e-309 cycA - - E ko:K03293,ko:K11737 - ko00000,ko02000 Amino acid permease
GDEDEPGN_00670 7.06e-111 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 transferase hexapeptide repeat
GDEDEPGN_00671 3.57e-204 - - - K - - - Transcriptional regulator
GDEDEPGN_00672 1.31e-81 - - - S - - - Domain of unknown function (DUF956)
GDEDEPGN_00673 3.51e-222 manN - - G ko:K02796 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 system, mannose fructose sorbose family IID component
GDEDEPGN_00674 9.65e-181 manY - - G ko:K02746,ko:K02795 ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system
GDEDEPGN_00675 4.5e-235 manL 2.7.1.191 - G ko:K02793,ko:K02794 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system sorbose subfamily IIB component
GDEDEPGN_00677 6.12e-94 - - - L - - - COG2826 Transposase and inactivated derivatives, IS30 family
GDEDEPGN_00678 3.07e-124 - - - - - - - -
GDEDEPGN_00679 2.81e-200 ycsE - - S - - - Sucrose-6F-phosphate phosphohydrolase
GDEDEPGN_00680 1.64e-174 ung 3.2.2.27 - L ko:K03648 ko03410,ko05340,map03410,map05340 ko00000,ko00001,ko01000,ko03400 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
GDEDEPGN_00681 1.1e-232 pta 2.3.1.8, 3.6.3.21 - C ko:K00625,ko:K02028 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000,ko02000 phosphate acetyltransferase
GDEDEPGN_00682 4.82e-113 ydiB - - O ko:K06925 - ko00000,ko03016 Hydrolase, P-loop family
GDEDEPGN_00683 1.51e-127 dnaQ 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
GDEDEPGN_00684 2.84e-208 murB 1.3.1.98 - M ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation
GDEDEPGN_00685 1.25e-263 potA 3.6.3.30, 3.6.3.31 - P ko:K02010,ko:K11072 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
GDEDEPGN_00686 8.77e-173 potB - - P ko:K11071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
GDEDEPGN_00687 3.69e-170 potC - - P ko:K11070 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
GDEDEPGN_00688 3.46e-266 potD - - P ko:K11069 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
GDEDEPGN_00689 2.13e-194 dacA 2.7.7.85 - S ko:K18672 - ko00000,ko01000 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
GDEDEPGN_00690 2.76e-221 ybbR - - S - - - YbbR-like protein
GDEDEPGN_00691 0.0 glmM 5.4.2.10 - G ko:K03431 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko01000 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GDEDEPGN_00692 8.04e-190 - - - S - - - hydrolase
GDEDEPGN_00693 3.23e-98 copY - - K ko:K02171 ko01501,map01501 ko00000,ko00001,ko00002,ko01504,ko03000 Penicillinase repressor
GDEDEPGN_00694 2.85e-153 - - - - - - - -
GDEDEPGN_00695 3.07e-112 ptpA 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Belongs to the low molecular weight phosphotyrosine protein phosphatase family
GDEDEPGN_00696 1.25e-262 glxK 2.7.1.165 - G ko:K00865 ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130 ko00000,ko00001,ko01000 Belongs to the glycerate kinase type-1 family
GDEDEPGN_00697 8.39e-195 bglG5 - - K ko:K03488 - ko00000,ko03000 CAT RNA binding domain
GDEDEPGN_00698 0.0 pts33BCA - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
GDEDEPGN_00699 0.0 - 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
GDEDEPGN_00700 5.92e-235 ybcH - - D ko:K06889 - ko00000 Alpha beta
GDEDEPGN_00701 0.0 - - - E - - - Amino acid permease
GDEDEPGN_00703 4.8e-38 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GDEDEPGN_00704 7.83e-140 ylbE - - GM - - - NAD(P)H-binding
GDEDEPGN_00705 3.31e-120 - - - S - - - VanZ like family
GDEDEPGN_00706 5.65e-171 yebC - - K - - - Transcriptional regulatory protein
GDEDEPGN_00707 5.04e-231 comGA - - NU ko:K02243 - ko00000,ko00002,ko02044 Type II IV secretion system protein
GDEDEPGN_00708 5.15e-224 comGB - - NU ko:K02244 - ko00000,ko00002,ko02044 type II secretion system
GDEDEPGN_00709 7.88e-63 comGC - - U ko:K02245 - ko00000,ko00002,ko02044 competence protein ComGC
GDEDEPGN_00710 8.52e-93 - - - - ko:K02246 - ko00000,ko00002,ko02044 -
GDEDEPGN_00711 1.96e-54 - - - - - - - -
GDEDEPGN_00712 1.31e-98 - - - U ko:K02248 - ko00000,ko00002,ko02044 Putative Competence protein ComGF
GDEDEPGN_00713 3.69e-30 - - - - - - - -
GDEDEPGN_00714 4.37e-241 ytxK 2.1.1.72 - L ko:K00571 - ko00000,ko01000,ko02048 N-6 DNA Methylase
GDEDEPGN_00715 1.07e-281 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GDEDEPGN_00717 2.63e-194 int3 - - L - - - Belongs to the 'phage' integrase family
GDEDEPGN_00719 3.74e-20 - - - K - - - Cro/C1-type HTH DNA-binding domain
GDEDEPGN_00720 5.58e-33 - - - K - - - Helix-turn-helix XRE-family like proteins
GDEDEPGN_00721 9.39e-39 - - - K - - - Helix-turn-helix domain
GDEDEPGN_00722 2.38e-32 - - - S - - - Domain of unknown function (DUF771)
GDEDEPGN_00730 2.59e-10 ssb - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
GDEDEPGN_00734 2.48e-15 - - - S - - - SLAP domain
GDEDEPGN_00735 3.61e-20 srtA 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
GDEDEPGN_00737 2.46e-10 - - - M - - - oxidoreductase activity
GDEDEPGN_00738 6.55e-05 - - - M - - - Conserved repeat domain
GDEDEPGN_00739 3.76e-13 - - - S - - - SLAP domain
GDEDEPGN_00744 1.14e-163 - - - U ko:K03205 ko03070,map03070 ko00000,ko00001,ko00002,ko02044 TraM recognition site of TraD and TraG
GDEDEPGN_00748 3.25e-194 - - - S - - - COG0433 Predicted ATPase
GDEDEPGN_00749 2.23e-24 lysM - - M - - - LysM domain
GDEDEPGN_00758 1.72e-33 - - - L - - - four-way junction helicase activity
GDEDEPGN_00759 2.63e-24 - - - L - - - Psort location Cytoplasmic, score
GDEDEPGN_00761 4.16e-55 - - - E - - - Pfam:DUF955
GDEDEPGN_00762 1.69e-31 - - - L ko:K07473 - ko00000,ko02048 Addiction module antitoxin, RelB DinJ family
GDEDEPGN_00763 1.33e-22 - - - S - - - PemK-like, MazF-like toxin of type II toxin-antitoxin system
GDEDEPGN_00765 2.72e-158 - - - L - - - This gene contains a nucleotide ambiguity which may be the result of a sequencing error
GDEDEPGN_00767 1.51e-27 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
GDEDEPGN_00768 2.78e-45 - - - - - - - -
GDEDEPGN_00769 1.54e-87 doc - - S ko:K07341 - ko00000,ko02048 Fic/DOC family
GDEDEPGN_00771 5.85e-67 - - - L - - - An automated process has identified a potential problem with this gene model
GDEDEPGN_00772 1.78e-21 - - - L - - - An automated process has identified a potential problem with this gene model
GDEDEPGN_00774 7.62e-32 - 2.7.1.200 - G ko:K02773 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GDEDEPGN_00775 8.24e-257 - - - G ko:K02775 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system sugar-specific permease component
GDEDEPGN_00776 4.68e-25 - 2.7.1.200 - G ko:K02774 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
GDEDEPGN_00777 7.98e-35 - - - GKT - - - Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GDEDEPGN_00778 1.71e-156 araD 5.1.3.4 - G ko:K03077 ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120 ko00000,ko00001,ko00002,ko01000 links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
GDEDEPGN_00779 9.56e-129 - - - L - - - An automated process has identified a potential problem with this gene model
GDEDEPGN_00780 5.44e-299 - - - V - - - N-6 DNA Methylase
GDEDEPGN_00781 4.82e-102 - - - V - - - Type I restriction modification DNA specificity domain
GDEDEPGN_00782 6.8e-48 - - - S ko:K19157 - ko00000,ko01000,ko02048 Bacterial toxin of type II toxin-antitoxin system, YafQ
GDEDEPGN_00783 2.73e-21 - - - L ko:K07473 - ko00000,ko02048 RelB antitoxin
GDEDEPGN_00784 2.82e-17 - - - L ko:K07473 - ko00000,ko02048 RelB antitoxin
GDEDEPGN_00785 2e-90 B4168_4126 - - L ko:K07493 - ko00000 Transposase
GDEDEPGN_00786 7.9e-272 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
GDEDEPGN_00787 2.8e-160 - - - S ko:K07150 - ko00000 Protein of unknown function (DUF554)
GDEDEPGN_00788 1.1e-125 rimL - - J ko:K03817 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
GDEDEPGN_00789 1.64e-81 - - - - - - - -
GDEDEPGN_00790 0.0 - - - S - - - ABC transporter
GDEDEPGN_00791 7.35e-174 - - - S - - - Putative threonine/serine exporter
GDEDEPGN_00792 7.36e-109 - - - S - - - Threonine/Serine exporter, ThrE
GDEDEPGN_00793 2.72e-144 - - - S - - - Peptidase_C39 like family
GDEDEPGN_00794 1.16e-101 - - - - - - - -
GDEDEPGN_00795 3.4e-227 nrdF 1.17.4.1 - F ko:K00526 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GDEDEPGN_00796 4.75e-101 nrdI - - F ko:K03647 - ko00000 NrdI Flavodoxin like
GDEDEPGN_00797 6.96e-286 tnpB - - L ko:K07496 - ko00000 Putative transposase DNA-binding domain
GDEDEPGN_00798 8.77e-144 - - - - - - - -
GDEDEPGN_00799 0.0 - - - S - - - O-antigen ligase like membrane protein
GDEDEPGN_00800 4.52e-56 - - - - - - - -
GDEDEPGN_00801 2.11e-115 gmk2 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Guanylate kinase homologues.
GDEDEPGN_00802 4.39e-116 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC/P60 family
GDEDEPGN_00803 1.28e-174 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC P60 family protein
GDEDEPGN_00804 1.73e-167 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC/P60 family
GDEDEPGN_00805 3.01e-54 - - - - - - - -
GDEDEPGN_00806 1.26e-223 - - - S - - - Cysteine-rich secretory protein family
GDEDEPGN_00807 1.3e-282 hflX - - S ko:K03665 - ko00000,ko03009 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GDEDEPGN_00811 1.47e-243 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
GDEDEPGN_00812 4.34e-184 epsB - - M - - - biosynthesis protein
GDEDEPGN_00813 2.78e-160 ywqD - - D - - - Capsular exopolysaccharide family
GDEDEPGN_00814 6.64e-186 ywqE 3.1.3.48 - GM ko:K01104 - ko00000,ko01000 PHP domain protein
GDEDEPGN_00815 6.65e-155 epsE2 - - M - - - Bacterial sugar transferase
GDEDEPGN_00816 6.23e-40 - - - M - - - Glycosyltransferase
GDEDEPGN_00817 5.25e-137 - - - M - - - Glycosyltransferase
GDEDEPGN_00818 1.53e-102 - - - M - - - Oligosaccharide biosynthesis protein Alg14 like
GDEDEPGN_00819 2.82e-97 - - - S - - - Glycosyltransferase family 28 C-terminal domain
GDEDEPGN_00820 2.38e-130 - - GT4 M ko:K19424 - ko00000,ko01000,ko01003 Glycosyl transferases group 1
GDEDEPGN_00821 2.56e-66 - - - M - - - Domain of unknown function (DUF1919)
GDEDEPGN_00822 5.18e-109 - - - M - - - Glycosyltransferase like family 2
GDEDEPGN_00823 2.94e-94 - - - S - - - Bacterial transferase hexapeptide (six repeats)
GDEDEPGN_00825 1.92e-90 - - - M - - - Glycosyltransferase like family 2
GDEDEPGN_00826 6.42e-185 - - - S ko:K03328 - ko00000 Membrane protein involved in the export of O-antigen and teichoic acid
GDEDEPGN_00827 1.64e-19 - - - - - - - -
GDEDEPGN_00829 1.91e-102 - - - G - - - Phosphoglycerate mutase family
GDEDEPGN_00830 1.49e-13 - - - G - - - Phosphoglycerate mutase family
GDEDEPGN_00831 0.0 pps 2.7.9.2 - H ko:K01007 ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
GDEDEPGN_00832 2.09e-208 rluA 5.4.99.23, 5.4.99.28, 5.4.99.29 - J ko:K06177,ko:K06180 - ko00000,ko01000,ko03009,ko03016 Responsible for synthesis of pseudouridine from uracil
GDEDEPGN_00833 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M ko:K12555 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 penicillin-binding protein
GDEDEPGN_00834 8.43e-73 yheA - - S - - - Belongs to the UPF0342 family
GDEDEPGN_00835 1.88e-292 yhaO - - L ko:K03547 - ko00000,ko03400 Ser Thr phosphatase family protein
GDEDEPGN_00836 0.0 yhaN - - L - - - AAA domain
GDEDEPGN_00837 4.53e-239 yhaM - - S ko:K03698 - ko00000,ko01000,ko03019 Metal dependent phosphohydrolases with conserved 'HD' motif.
GDEDEPGN_00839 9.67e-33 - - - S - - - Domain of unknown function DUF1829
GDEDEPGN_00840 0.0 - - - - - - - -
GDEDEPGN_00841 5.74e-96 eda 4.1.2.14, 4.1.3.42 - G ko:K01625 ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 KDPG and KHG aldolase
GDEDEPGN_00842 1.09e-196 prsA 5.2.1.8 - M ko:K07533 - ko00000,ko01000,ko03110 Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
GDEDEPGN_00843 1.2e-41 - - - - - - - -
GDEDEPGN_00844 1.61e-101 hit - - FG ko:K02503 - ko00000,ko04147 Scavenger mRNA decapping enzyme C-term binding
GDEDEPGN_00845 1.05e-173 ecsA - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
GDEDEPGN_00846 5.7e-282 ecsB - - U ko:K01992 - ko00000,ko00002,ko02000 ABC transporter
GDEDEPGN_00847 2.16e-163 trmB 2.1.1.33 - J ko:K03439 - ko00000,ko01000,ko03016 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
GDEDEPGN_00849 1.35e-71 ytpP - - CO - - - Thioredoxin
GDEDEPGN_00850 8.78e-157 XK27_10290 - - J ko:K06878 - ko00000 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
GDEDEPGN_00851 5.28e-251 - - - - - - - -
GDEDEPGN_00852 2.23e-314 murC 6.3.2.8 - M ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Belongs to the MurCDEF family
GDEDEPGN_00853 3.31e-299 mepA - - V ko:K18908 - ko00000,ko00002,ko01504,ko02000 MATE efflux family protein
GDEDEPGN_00854 7.29e-220 - - - S - - - SLAP domain
GDEDEPGN_00855 4.2e-93 tnpB - - L ko:K07496 - ko00000 Putative transposase DNA-binding domain
GDEDEPGN_00856 4.5e-107 tnpB - - L ko:K07496 - ko00000 Putative transposase DNA-binding domain
GDEDEPGN_00857 9.84e-108 - - - L - - - Resolvase, N-terminal
GDEDEPGN_00858 1.86e-197 - - - M - - - Peptidase family M1 domain
GDEDEPGN_00859 1.79e-245 - - - S - - - Bacteriocin helveticin-J
GDEDEPGN_00860 2.39e-26 - - - - - - - -
GDEDEPGN_00861 1.8e-66 - - - L ko:K07473 - ko00000,ko02048 RelB antitoxin
GDEDEPGN_00862 2.27e-191 hflC - - O ko:K04087 - ko00000,ko00002,ko01000 prohibitin homologues
GDEDEPGN_00863 7.36e-135 - - - C - - - Flavodoxin
GDEDEPGN_00864 3.79e-175 purD 6.3.4.13 - F ko:K01945 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the GARS family
GDEDEPGN_00865 1.44e-234 - - - L - - - Phage integrase family
GDEDEPGN_00866 3.94e-85 rpsI - - J ko:K02996 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS9 family
GDEDEPGN_00867 3.22e-103 rplM - - J ko:K02871 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
GDEDEPGN_00868 1.06e-185 truA 5.4.99.12 - J ko:K06173 - ko00000,ko01000,ko03016 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
GDEDEPGN_00869 5.12e-174 ecfT - - U ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GDEDEPGN_00870 5.5e-202 ecfA2 - - P ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GDEDEPGN_00871 1.02e-198 ecfA1 - - P ko:K16786 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GDEDEPGN_00872 2.23e-80 rplQ - - J ko:K02879 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L17
GDEDEPGN_00873 3.62e-218 rpoA 2.7.7.6 - K ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GDEDEPGN_00874 3.82e-82 rpsK - - J ko:K02948 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
GDEDEPGN_00875 3.44e-72 rpsM - - J ko:K02952 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
GDEDEPGN_00876 1.89e-21 rpmJ - - J ko:K02919 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL36 family
GDEDEPGN_00877 3.13e-46 infA - - J ko:K02518 - ko00000,ko03012 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
GDEDEPGN_00878 3.7e-155 adk 2.7.4.3 - F ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
GDEDEPGN_00879 1.25e-301 secY - - U ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
GDEDEPGN_00880 4.95e-93 rplO - - J ko:K02876 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
GDEDEPGN_00881 2.22e-34 rpmD - - J ko:K02907 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L30
GDEDEPGN_00882 3.73e-110 rpsE - - J ko:K02988 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
GDEDEPGN_00883 2.8e-72 rplR - - J ko:K02881 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
GDEDEPGN_00884 7.18e-121 rplF - - J ko:K02933 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
GDEDEPGN_00885 7.94e-90 rpsH - - J ko:K02994 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
GDEDEPGN_00886 1e-39 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GDEDEPGN_00887 1.23e-123 rplE - - J ko:K02931 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
GDEDEPGN_00888 3.03e-44 rplX - - J ko:K02895 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
GDEDEPGN_00889 3.62e-79 rplN - - J ko:K02874 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
GDEDEPGN_00890 1.56e-55 rpsQ - - J ko:K02961 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
GDEDEPGN_00891 1.45e-34 rpmC - - J ko:K02904 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uL29 family
GDEDEPGN_00892 1.66e-100 rplP - - J ko:K02878 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
GDEDEPGN_00893 8.7e-157 rpsC - - J ko:K02982 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
GDEDEPGN_00894 9.07e-73 rplV - - J ko:K02890 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
GDEDEPGN_00895 1.14e-62 rpsS - - J ko:K02965 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
GDEDEPGN_00896 4.01e-198 rplB - - J ko:K02886 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
GDEDEPGN_00897 1.14e-63 rplW - - J ko:K02892 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
GDEDEPGN_00898 4.68e-138 rplD - - J ko:K02926 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the polypeptide exit tunnel
GDEDEPGN_00899 6.64e-146 rplC - - J ko:K02906 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
GDEDEPGN_00900 6.34e-66 rpsJ - - J ko:K02946 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Involved in the binding of tRNA to the ribosomes
GDEDEPGN_00901 0.0 fusA - - J ko:K02355 - ko00000,ko03012,ko03029 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GDEDEPGN_00902 8.05e-106 rpsG - - J ko:K02992 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
GDEDEPGN_00903 1.47e-91 rpsL - - J ko:K02950 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
GDEDEPGN_00904 7.71e-157 comC 3.4.23.43 - NOU ko:K02236 - ko00000,ko00002,ko01000,ko02044 Bacterial Peptidase A24 N-terminal domain
GDEDEPGN_00905 0.0 rpoC 2.7.7.6 - K ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GDEDEPGN_00906 0.0 rpoB 2.7.7.6 - K ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GDEDEPGN_00907 0.0 clpC - - O ko:K03696 ko01100,map01100 ko00000,ko03110 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
GDEDEPGN_00908 1.92e-106 ytsP 1.8.4.14 - T ko:K08968 ko00270,map00270 ko00000,ko00001,ko01000 GAF domain-containing protein
GDEDEPGN_00912 2.14e-234 scrR - - K ko:K03484 - ko00000,ko03000 helix_turn _helix lactose operon repressor
GDEDEPGN_00913 0.0 scrB 3.2.1.26 GH32 G ko:K01193 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 invertase
GDEDEPGN_00914 0.0 scrA 2.7.1.211 - G ko:K02808,ko:K02809,ko:K02810 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
GDEDEPGN_00915 2.14e-231 - - - M - - - CHAP domain
GDEDEPGN_00916 2.79e-102 - - - - - - - -
GDEDEPGN_00917 1.06e-58 groS - - O ko:K04078 - ko00000,ko03029,ko03110 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GDEDEPGN_00918 0.0 groL - - O ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
GDEDEPGN_00919 0.0 mutS - - L ko:K03555 ko03430,map03430 ko00000,ko00001,ko03400 that it carries out the mismatch recognition step. This protein has a weak ATPase activity
GDEDEPGN_00920 0.0 mutL - - L ko:K03572 ko03430,map03430 ko00000,ko00001,ko03400 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
GDEDEPGN_00921 3.89e-132 ruvA 3.6.4.12 - L ko:K03550 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
GDEDEPGN_00922 1.39e-237 ruvB 3.6.4.12 - L ko:K03551 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
GDEDEPGN_00923 7.58e-69 yajC - - U ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase
GDEDEPGN_00924 0.0 zwf 1.1.1.363, 1.1.1.49 - G ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
GDEDEPGN_00925 6.15e-268 dinB 2.7.7.7 - L ko:K02346 - ko00000,ko01000,ko03400 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GDEDEPGN_00926 7.44e-230 nrnA 3.1.13.3, 3.1.3.7 - S ko:K06881 ko00920,ko01100,ko01120,map00920,map01100,map01120 ko00000,ko00001,ko01000,ko03400 DHHA1 domain protein
GDEDEPGN_00927 1.32e-305 cshB 3.6.4.13 - JKL ko:K05592,ko:K18692 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
GDEDEPGN_00928 0.0 alaS 6.1.1.7 - J ko:K01872 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GDEDEPGN_00929 5.32e-57 yrzL - - S - - - Belongs to the UPF0297 family
GDEDEPGN_00930 9.37e-96 yrrK - - J ko:K07447 - ko00000,ko01000 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
GDEDEPGN_00931 1.18e-66 yrzB - - S - - - Belongs to the UPF0473 family
GDEDEPGN_00932 0.0 mutS2 - - L ko:K07456 ko03430,map03430 ko00000,ko00001,ko03400 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
GDEDEPGN_00933 2.19e-71 trxA - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Belongs to the thioredoxin family
GDEDEPGN_00934 2.34e-76 mscL - - M ko:K03282 - ko00000,ko02000 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
GDEDEPGN_00935 5.62e-95 yslB - - S - - - Protein of unknown function (DUF2507)
GDEDEPGN_00936 2.91e-186 murI 3.6.1.66, 5.1.1.3 - M ko:K01776,ko:K02428 ko00230,ko00471,ko01100,map00230,map00471,map01100 ko00000,ko00001,ko01000,ko01011 Provides the (R)-glutamate required for cell wall biosynthesis
GDEDEPGN_00937 2.43e-145 rdgB 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
GDEDEPGN_00939 2.84e-150 - - - K - - - sequence-specific DNA binding
GDEDEPGN_00940 7.95e-06 - - - - - - - -
GDEDEPGN_00942 8.56e-181 ykuT - - M ko:K16052,ko:K22044 - ko00000,ko02000 mechanosensitive ion channel
GDEDEPGN_00943 2.96e-23 ytxG - - S - - - protein containing a divergent version of the methyl-accepting chemotaxis-like domain
GDEDEPGN_00944 3.09e-71 - - - - - - - -
GDEDEPGN_00945 3.6e-106 - - - C - - - Flavodoxin
GDEDEPGN_00946 0.0 recQ 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
GDEDEPGN_00947 5.81e-310 ynbB - - P - - - aluminum resistance
GDEDEPGN_00948 0.0 speA 4.1.1.17, 4.1.1.18, 4.1.1.19 - E ko:K01581,ko:K01582,ko:K01585 ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Orn/Lys/Arg decarboxylase, C-terminal domain
GDEDEPGN_00949 0.0 - - - E - - - Amino acid permease
GDEDEPGN_00950 9.58e-122 - - - C - - - Pyridoxamine 5'-phosphate oxidase
GDEDEPGN_00951 0.0 pepV 3.5.1.18 - E ko:K01270,ko:K01274,ko:K01439 ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000,ko01002 dipeptidase PepV
GDEDEPGN_00952 2.47e-144 ybgF - - E ko:K02205,ko:K03293,ko:K16235,ko:K16236 - ko00000,ko02000 amino acid
GDEDEPGN_00953 1.31e-16 mmuM 2.1.1.10 - H ko:K00547 ko00270,ko01100,ko01110,map00270,map01100,map01110 ko00000,ko00001,ko01000 homocysteine S-methyltransferase
GDEDEPGN_00954 2.95e-84 crcB - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GDEDEPGN_00955 9.28e-89 crcB1 - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GDEDEPGN_00956 3.71e-195 - - - L - - - Phage integrase, N-terminal SAM-like domain
GDEDEPGN_00957 8.85e-121 - - - M - - - LysM domain protein
GDEDEPGN_00958 6.42e-110 - - - C - - - Aldo keto reductase
GDEDEPGN_00959 9.4e-232 lacX 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Aldose 1-epimerase
GDEDEPGN_00960 1.4e-313 hslU - - O ko:K03667 - ko00000,ko03110 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
GDEDEPGN_00961 4.67e-116 hslV 3.4.25.2 - O ko:K01419 - ko00000,ko01000,ko01002 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
GDEDEPGN_00962 5.99e-180 xerC - - D ko:K03733,ko:K04763 - ko00000,ko03036 Phage integrase, N-terminal SAM-like domain
GDEDEPGN_00963 8.35e-315 trmFO 2.1.1.74 - J ko:K04094 - ko00000,ko01000,ko03016,ko03036 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
GDEDEPGN_00964 0.0 topA 5.99.1.2 - L ko:K03168 - ko00000,ko01000,ko03032,ko03400 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GDEDEPGN_00965 1.5e-195 dprA - - LU ko:K04096 - ko00000 DNA protecting protein DprA
GDEDEPGN_00966 1e-168 rnhB 3.1.26.4 - L ko:K03470 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GDEDEPGN_00967 2.15e-198 rbgA - - S ko:K14540 - ko00000,ko03009 Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
GDEDEPGN_00968 2.4e-118 nhaP4 - - P ko:K03316 - ko00000 Sodium proton antiporter
GDEDEPGN_00969 7.2e-49 nhaP4 - - P ko:K03316 - ko00000 Sodium proton antiporter
GDEDEPGN_00970 3.67e-88 - - - P - - - NhaP-type Na H and K H
GDEDEPGN_00971 9.85e-49 yozE - - S - - - Belongs to the UPF0346 family
GDEDEPGN_00972 8.83e-187 degV3 - - S - - - Uncharacterised protein, DegV family COG1307
GDEDEPGN_00973 1.8e-143 hlyIII - - S ko:K11068 - ko00000,ko02042 protein, hemolysin III
GDEDEPGN_00974 5.13e-287 cca 2.7.7.72 - J ko:K00974 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
GDEDEPGN_00975 1.15e-205 XK27_10395 - - S - - - Uncharacterised 5xTM membrane BCR, YitT family COG1284
GDEDEPGN_00976 9.58e-112 - 3.4.21.96 - S ko:K01361 - ko00000,ko01000,ko01002,ko03110 SLAP domain
GDEDEPGN_00977 1.01e-240 yagE - - E - - - Amino acid permease
GDEDEPGN_00978 5.62e-134 - - - K - - - Helix-turn-helix domain, rpiR family
GDEDEPGN_00979 1.52e-105 - - - L - - - MgsA AAA+ ATPase C terminal
GDEDEPGN_00980 2.53e-287 lacE 2.7.1.207 - G ko:K02761,ko:K02787,ko:K02788 ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GDEDEPGN_00982 2.77e-135 - - - K ko:K06977 - ko00000 acetyltransferase
GDEDEPGN_00983 5.45e-121 hpt 2.4.2.8 - F ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the purine pyrimidine phosphoribosyltransferase family
GDEDEPGN_00984 6.16e-14 - - - - - - - -
GDEDEPGN_00985 8.75e-197 - - - - - - - -
GDEDEPGN_00986 0.0 malH 3.2.1.122 GH4 G ko:K01232 ko00500,map00500 ko00000,ko00001,ko01000 Family 4 glycosyl hydrolase C-terminal domain
GDEDEPGN_00987 8.28e-176 - - - K ko:K03481 - ko00000,ko03000 Helix-turn-helix domain, rpiR family
GDEDEPGN_00988 4.71e-239 ansA 3.5.1.1 - EJ ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 ko00000,ko00001,ko01000 L-asparaginase, type I
GDEDEPGN_00989 4.65e-14 - - - - - - - -
GDEDEPGN_00990 1.42e-57 - - - - - - - -
GDEDEPGN_00991 7.34e-86 - 2.7.1.191 - G ko:K02793 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system fructose IIA component
GDEDEPGN_00992 0.0 pacL3 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
GDEDEPGN_00993 2.7e-162 - - - - - - - -
GDEDEPGN_00994 1.87e-308 - - - S - - - response to antibiotic
GDEDEPGN_00995 7.53e-163 gpm2 - - G - - - Phosphoglycerate mutase family
GDEDEPGN_00996 9.95e-157 XK27_08875 - - O - - - PFAM peptidase M10A and M12B, matrixin and adamalysin
GDEDEPGN_00997 0.0 helD 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
GDEDEPGN_00998 3e-139 yecS_2 - - P ko:K02029,ko:K02030 - ko00000,ko00002,ko02000 ABC transporter permease
GDEDEPGN_00999 6.89e-136 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter
GDEDEPGN_01000 7.09e-184 aatB - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein
GDEDEPGN_01001 2.34e-97 yjcF - - S - - - Acetyltransferase (GNAT) domain
GDEDEPGN_01002 1.13e-126 - - - E - - - GDSL-like Lipase/Acylhydrolase
GDEDEPGN_01003 1.43e-220 coaA 2.7.1.33 - F ko:K00867 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Pantothenic acid kinase
GDEDEPGN_01004 5.16e-135 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GDEDEPGN_01006 1.02e-74 - - - S - - - Peptidase propeptide and YPEB domain
GDEDEPGN_01007 0.0 leuS 6.1.1.4 - J ko:K01869 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Belongs to the class-I aminoacyl-tRNA synthetase family
GDEDEPGN_01008 1.39e-156 yodM 3.6.1.27 - I ko:K19302 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Acid phosphatase homologues
GDEDEPGN_01009 6.75e-216 - - - K - - - LysR substrate binding domain
GDEDEPGN_01010 2.82e-110 - - - S - - - PD-(D/E)XK nuclease family transposase
GDEDEPGN_01011 3.16e-52 - 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
GDEDEPGN_01012 1.74e-293 yumB 1.6.99.3 - C ko:K03885 ko00190,map00190 ko00000,ko00001,ko01000 NADH dehydrogenase
GDEDEPGN_01013 4e-204 menA 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 1,4-dihydroxy-2-naphthoate
GDEDEPGN_01014 7.38e-168 hepT 2.5.1.30 - H ko:K00805 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Belongs to the FPP GGPP synthase family
GDEDEPGN_01015 1.76e-165 menG 2.1.1.163, 2.1.1.201 - H ko:K03183 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
GDEDEPGN_01016 0.0 cydD - - CO ko:K16012 ko02010,map02010 ko00000,ko00001,ko02000 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
GDEDEPGN_01017 0.0 cydC - - CO ko:K16013 ko02010,map02010 ko00000,ko00001,ko02000 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
GDEDEPGN_01018 4.87e-236 cydB 1.10.3.14 - C ko:K00426 ko00190,ko01100,ko02020,map00190,map01100,map02020 ko00000,ko00001,ko00002,ko01000 Cytochrome d ubiquinol oxidase subunit II
GDEDEPGN_01019 0.0 cydA 1.10.3.14 - C ko:K00425 ko00190,ko01100,ko02020,map00190,map01100,map02020 ko00000,ko00001,ko00002,ko01000 ubiquinol oxidase
GDEDEPGN_01020 3.22e-185 - - - K - - - rpiR family
GDEDEPGN_01021 5.06e-237 - - - S ko:K09963 - ko00000 Bacterial protein of unknown function (DUF871)
GDEDEPGN_01022 7.56e-225 ybbE 3.4.16.4 - V ko:K21469 ko00550,map00550 ko00000,ko00001,ko01000,ko01002,ko01011 Beta-lactamase
GDEDEPGN_01023 1.54e-194 murQ 4.2.1.126 - G ko:K07106 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
GDEDEPGN_01024 0.0 pts32BC 2.7.1.211 - G ko:K02808,ko:K02809,ko:K02810 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
GDEDEPGN_01025 5.03e-313 mdr - - EGP - - - Major Facilitator
GDEDEPGN_01026 1.72e-285 metK 2.5.1.6 - H ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
GDEDEPGN_01029 1.35e-191 - - - P ko:K02077 - ko00000,ko00002,ko02000 Belongs to the bacterial solute-binding protein 9 family
GDEDEPGN_01030 2.42e-50 - - - L - - - An automated process has identified a potential problem with this gene model
GDEDEPGN_01031 3.28e-133 - - - V - - - ABC transporter transmembrane region
GDEDEPGN_01032 5.19e-248 - - - G - - - Transmembrane secretion effector
GDEDEPGN_01033 1.49e-151 - - - V - - - Abi-like protein
GDEDEPGN_01034 1.34e-175 - - - K - - - Helix-turn-helix XRE-family like proteins
GDEDEPGN_01035 1.3e-31 - - - - - - - -
GDEDEPGN_01036 2.61e-195 thiD 2.7.1.49, 2.7.4.7 - H ko:K00941 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Phosphomethylpyrimidine kinase
GDEDEPGN_01037 0.0 glpK 2.7.1.30 - F ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 ko00000,ko00001,ko01000,ko04147 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
GDEDEPGN_01038 3.56e-186 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
GDEDEPGN_01039 6.1e-228 yvdE - - K - - - helix_turn _helix lactose operon repressor
GDEDEPGN_01040 3.15e-259 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GDEDEPGN_01041 3.2e-28 XK27_04775 - - S ko:K09155 - ko00000 PAS domain
GDEDEPGN_01042 1.42e-42 XK27_04775 - - S ko:K09155 - ko00000 PAS domain
GDEDEPGN_01043 0.0 malA1 3.2.1.10, 3.2.1.20 GH13,GH31 G ko:K01182,ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain
GDEDEPGN_01044 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G ko:K01208 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 13 family
GDEDEPGN_01045 0.0 mapA 2.4.1.8 GH65 G ko:K00691 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 hydrolase, family 65, central catalytic
GDEDEPGN_01046 9.37e-150 pgmB 5.4.2.6 - S ko:K01838 ko00500,map00500 ko00000,ko00001,ko01000 beta-phosphoglucomutase
GDEDEPGN_01047 7e-267 msmX - - P ko:K10112 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
GDEDEPGN_01048 5.5e-282 - - - G ko:K15770 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDEDEPGN_01049 0.0 malF - - P ko:K15771 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDEDEPGN_01050 1.39e-197 malG - - P ko:K15772 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
GDEDEPGN_01051 1.45e-74 - - - K - - - Helix-turn-helix XRE-family like proteins
GDEDEPGN_01052 2.89e-151 phoU - - P ko:K02039 - ko00000 Plays a role in the regulation of phosphate uptake
GDEDEPGN_01053 3.83e-178 pstB1 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GDEDEPGN_01054 5.24e-187 pstB2 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GDEDEPGN_01055 3.01e-197 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphate transport system permease protein PstA
GDEDEPGN_01056 2.29e-210 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
GDEDEPGN_01057 5.48e-201 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 Phosphate
GDEDEPGN_01058 1.05e-160 rplA - - J ko:K02863 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
GDEDEPGN_01059 3.82e-90 rplK - - J ko:K02867 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
GDEDEPGN_01060 1.23e-130 nusG - - K ko:K02601 - ko00000,ko03009,ko03021 Participates in transcription elongation, termination and antitermination
GDEDEPGN_01061 3.73e-33 secE - - U ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
GDEDEPGN_01062 0.0 dxs 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
GDEDEPGN_01063 0.0 gntK 2.7.1.12 - G ko:K00851 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko01000 Belongs to the FGGY kinase family
GDEDEPGN_01064 1.19e-45 - - - - - - - -
GDEDEPGN_01065 3.81e-123 comX - - K ko:K03088,ko:K03091,ko:K12296 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko03000,ko03021 Belongs to the sigma-70 factor family
GDEDEPGN_01066 1.56e-177 trmH 2.1.1.185 - J ko:K03218 - ko00000,ko01000,ko03009 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GDEDEPGN_01067 4.95e-98 mrnC - - J ko:K11145 - ko00000,ko01000,ko03009 Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
GDEDEPGN_01068 0.0 cysS 6.1.1.16 - J ko:K01883 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
GDEDEPGN_01069 0.0 gltX 6.1.1.24 - J ko:K09698 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GDEDEPGN_01070 0.0 radA - - O ko:K04485 - ko00000,ko03400 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
GDEDEPGN_01071 5.22e-131 dut 3.6.1.23 - F ko:K01520 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 dUTP diphosphatase
GDEDEPGN_01072 2.23e-69 - - - - - - - -
GDEDEPGN_01073 0.0 pepC 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
GDEDEPGN_01074 1.99e-235 - - - S - - - AAA domain
GDEDEPGN_01075 3.43e-164 gpmA1 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GDEDEPGN_01076 2.42e-33 - - - - - - - -
GDEDEPGN_01077 8.43e-206 - - - P ko:K16264 - ko00000,ko02000 cation diffusion facilitator family transporter
GDEDEPGN_01078 3.16e-160 - - - G - - - Belongs to the phosphoglycerate mutase family
GDEDEPGN_01080 3.68e-93 tagD 2.7.7.39 - IM ko:K00980 ko00564,map00564 ko00000,ko00001,ko01000 Glycerol-3-phosphate cytidylyltransferase
GDEDEPGN_01081 1.87e-159 gntR1 - - K ko:K03710 - ko00000,ko03000 UTRA
GDEDEPGN_01082 1.53e-232 - - - - - - - -
GDEDEPGN_01083 0.0 oppA2 - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
GDEDEPGN_01086 7.62e-306 npr 1.11.1.1 - C ko:K05910 - ko00000,ko01000 NADH oxidase
GDEDEPGN_01087 1.48e-14 - - - - - - - -
GDEDEPGN_01088 5.24e-31 - - - S - - - transposase or invertase
GDEDEPGN_01089 9.6e-309 slpX - - S - - - SLAP domain
GDEDEPGN_01090 1.43e-186 - - - K - - - SIS domain
GDEDEPGN_01091 3.01e-154 rpiA1 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
GDEDEPGN_01092 1.03e-237 XK27_10475 - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
GDEDEPGN_01093 1.93e-266 araT 2.6.1.57 - E ko:K00832,ko:K00841 ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
GDEDEPGN_01095 0.0 mgtA 3.6.3.2 - P ko:K01531 - ko00000,ko01000 COG0474 Cation transport ATPase
GDEDEPGN_01097 2.67e-148 glpQ1 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 glycerophosphoryl diester phosphodiesterase
GDEDEPGN_01098 1.9e-153 - - - G - - - Antibiotic biosynthesis monooxygenase
GDEDEPGN_01099 9.01e-115 - - - G - - - Histidine phosphatase superfamily (branch 1)
GDEDEPGN_01100 8.92e-136 - - - G - - - Phosphoglycerate mutase family
GDEDEPGN_01101 5.68e-211 - - - D - - - nuclear chromosome segregation
GDEDEPGN_01102 1.33e-130 - - - M - - - LysM domain protein
GDEDEPGN_01103 2.57e-108 licC - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GDEDEPGN_01104 8.08e-160 licC - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GDEDEPGN_01105 9.7e-127 - - - E ko:K02054 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDEDEPGN_01106 6.18e-123 rihC 3.2.2.1 - F ko:K01239,ko:K01250,ko:K12700 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 Nucleoside
GDEDEPGN_01107 1.07e-93 infC - - J ko:K02520 - ko00000,ko03012,ko03029 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
GDEDEPGN_01108 9.64e-38 rpmI - - J ko:K02916 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL35 family
GDEDEPGN_01109 8.69e-76 rplT - - J ko:K02887 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
GDEDEPGN_01110 5.28e-193 add 3.5.4.2, 3.5.4.4 - F ko:K01488,ko:K02029,ko:K21053 ko00230,ko01100,ko05340,map00230,map01100,map05340 ko00000,ko00001,ko00002,ko01000,ko02000 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
GDEDEPGN_01111 3.01e-255 tnpB - - L ko:K07496 - ko00000 Putative transposase DNA-binding domain
GDEDEPGN_01112 6.85e-109 yqeG - - S ko:K07015 - ko00000 HAD phosphatase, family IIIA
GDEDEPGN_01113 5.03e-256 yqeH - - S ko:K06948 - ko00000,ko03009 Ribosome biogenesis GTPase YqeH
GDEDEPGN_01114 1.77e-157 nadD 2.7.7.18 - H ko:K00969 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
GDEDEPGN_01115 9.22e-141 yqeK - - H - - - Hydrolase, HD family
GDEDEPGN_01116 5.95e-77 rsfS - - J ko:K09710 - ko00000,ko03009 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
GDEDEPGN_01117 8.01e-276 ylbM - - S - - - Belongs to the UPF0348 family
GDEDEPGN_01118 2.19e-125 ylbN - - S ko:K07040 - ko00000 Uncharacterized ACR, COG1399
GDEDEPGN_01119 3.52e-163 csrR - - K - - - response regulator
GDEDEPGN_01120 0.0 arlS 2.7.13.3 - T ko:K18940 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
GDEDEPGN_01121 2.19e-18 - - - - - - - -
GDEDEPGN_01122 4.28e-125 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
GDEDEPGN_01123 4.76e-170 - - - S - - - SLAP domain
GDEDEPGN_01124 2.05e-107 - - - S - - - SLAP domain
GDEDEPGN_01125 1.13e-108 - - - S ko:K19055 - ko00000,ko01000,ko03016 Aminoacyl-tRNA editing domain
GDEDEPGN_01126 2.43e-216 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
GDEDEPGN_01127 5.58e-59 acyP 3.6.1.7 - C ko:K01512 ko00620,ko00627,ko01120,map00620,map00627,map01120 ko00000,ko00001,ko01000 Belongs to the acylphosphatase family
GDEDEPGN_01128 1.37e-173 spoU - - J ko:K03437 - ko00000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GDEDEPGN_01129 3.71e-76 yodB - - K - - - Transcriptional regulator, HxlR family
GDEDEPGN_01131 1.81e-139 glnP9 - - P ko:K02029 - ko00000,ko00002,ko02000 ABC transporter, permease protein
GDEDEPGN_01132 1.96e-148 glnP7 - - P ko:K02029 - ko00000,ko00002,ko02000 ABC transporter permease
GDEDEPGN_01133 7.91e-164 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
GDEDEPGN_01134 1.2e-202 cjaA - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein
GDEDEPGN_01135 2.9e-254 pheS 6.1.1.20 - J ko:K01889 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
GDEDEPGN_01136 0.0 pheT 6.1.1.20 - J ko:K01890 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
GDEDEPGN_01137 2.55e-94 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GDEDEPGN_01138 3.9e-213 ldh3 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 lactate/malate dehydrogenase, alpha/beta C-terminal domain
GDEDEPGN_01139 5.88e-181 metQ - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the nlpA lipoprotein family
GDEDEPGN_01140 1.8e-34 - - - - - - - -
GDEDEPGN_01141 0.0 sufI - - Q - - - Multicopper oxidase
GDEDEPGN_01142 1.76e-193 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
GDEDEPGN_01143 0.0 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter
GDEDEPGN_01144 8.29e-294 - - - Q - - - Imidazolonepropionase and related amidohydrolases
GDEDEPGN_01145 2.48e-313 - - - S ko:K12941 - ko00000,ko01002 Peptidase dimerisation domain
GDEDEPGN_01146 3.2e-176 - - - S - - - Protein of unknown function (DUF3100)
GDEDEPGN_01147 2.04e-60 - - - S - - - An automated process has identified a potential problem with this gene model
GDEDEPGN_01148 6.91e-67 - 2.7.7.49 - L ko:K00986 - ko00000,ko01000 PFAM RNA-directed DNA polymerase (Reverse transcriptase)
GDEDEPGN_01149 3.7e-164 - - - S - - - SLAP domain
GDEDEPGN_01150 1.75e-120 - - - - - - - -
GDEDEPGN_01152 4.07e-158 - - - M ko:K14193 ko05150,map05150 ko00000,ko00001 Iron Transport-associated domain
GDEDEPGN_01153 1.7e-202 isdE - - P ko:K02016 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Periplasmic binding protein
GDEDEPGN_01154 2.2e-201 isdF - - U ko:K02015 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GDEDEPGN_01155 1.49e-178 - 3.6.3.34 - HP ko:K02013 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 abc transporter atp-binding protein
GDEDEPGN_01156 2.22e-60 hupB2 - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
GDEDEPGN_01157 2.74e-69 - - - S ko:K19157 - ko00000,ko01000,ko02048 Bacterial toxin of type II toxin-antitoxin system, YafQ
GDEDEPGN_01158 9.43e-52 - - - S ko:K07473 - ko00000,ko02048 RelB antitoxin
GDEDEPGN_01159 7.04e-218 - - - G - - - BadF/BadG/BcrA/BcrD ATPase family
GDEDEPGN_01160 0.0 - - - S - - - membrane
GDEDEPGN_01161 0.0 pbp2b - - M ko:K00687,ko:K12553,ko:K21465,ko:K21466 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011 Penicillin-binding Protein
GDEDEPGN_01162 6.25e-29 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL33 family
GDEDEPGN_01163 1.94e-126 fthC 6.3.3.2 - H ko:K01934 ko00670,ko01100,map00670,map01100 ko00000,ko00001,ko01000 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
GDEDEPGN_01164 9.32e-154 gluP 3.4.21.105 - S ko:K19225 - ko00000,ko01000,ko01002 Rhomboid family
GDEDEPGN_01165 1e-47 yqgQ - - S - - - Bacterial protein of unknown function (DUF910)
GDEDEPGN_01166 4.95e-89 yqhL - - P - - - Rhodanese-like protein
GDEDEPGN_01167 1.9e-216 miaA 2.5.1.75 - F ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 ko00000,ko00001,ko01000,ko01006,ko03016 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
GDEDEPGN_01168 1.74e-282 ynbB - - P - - - aluminum resistance
GDEDEPGN_01169 0.0 glnA 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 glutamine synthetase
GDEDEPGN_01170 9.64e-219 - - - - - - - -
GDEDEPGN_01171 1.21e-204 - - - - - - - -
GDEDEPGN_01175 6.78e-47 - - - - - - - -
GDEDEPGN_01176 1.94e-165 - - - S - - - interspecies interaction between organisms
GDEDEPGN_01177 1.28e-09 - - - S - - - PFAM HicB family
GDEDEPGN_01178 2.86e-13 - - - K ko:K15773 - ko00000,ko02048,ko03000 peptidyl-tyrosine sulfation
GDEDEPGN_01179 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
GDEDEPGN_01180 1.57e-84 - - - K - - - Helix-turn-helix domain, rpiR family
GDEDEPGN_01181 5.61e-156 nanA 4.1.3.3 - EM ko:K01639 ko00520,map00520 ko00000,ko00001,ko01000 Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
GDEDEPGN_01182 1.03e-112 nanK - - GK - - - ROK family
GDEDEPGN_01183 3.74e-70 - - - G - - - Xylose isomerase domain protein TIM barrel
GDEDEPGN_01184 6.95e-165 napA - - P - - - Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
GDEDEPGN_01185 6.48e-279 - - - E ko:K03307 - ko00000 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GDEDEPGN_01186 2.82e-84 cah 3.1.1.41 - Q ko:K01060 ko00311,ko01130,map00311,map01130 ko00000,ko00001,ko01000 Acetyl xylan esterase (AXE1)
GDEDEPGN_01187 1.48e-28 axe1 3.1.1.41 - Q ko:K01060 ko00311,ko01130,map00311,map01130 ko00000,ko00001,ko01000 acetyl xylan esterase
GDEDEPGN_01188 1.19e-141 nanE 5.1.3.9 - G ko:K01788 ko00520,map00520 ko00000,ko00001,ko01000 Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
GDEDEPGN_01189 1.1e-155 nagA 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Belongs to the metallo-dependent hydrolases superfamily. NagA family
GDEDEPGN_01190 3.07e-136 - - - S - - - Alpha/beta hydrolase family
GDEDEPGN_01191 7.93e-139 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
GDEDEPGN_01192 0.0 uvrA2 - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 excinuclease ABC, A subunit
GDEDEPGN_01193 3.73e-240 mmuM 2.1.1.10 - H ko:K00547 ko00270,ko01100,ko01110,map00270,map01100,map01110 ko00000,ko00001,ko01000 homocysteine S-methyltransferase
GDEDEPGN_01194 5.94e-148 - - - I - - - Acid phosphatase homologues
GDEDEPGN_01195 1.12e-104 yvbK - - K - - - COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
GDEDEPGN_01196 8.83e-147 maa3 2.3.1.79 - S ko:K00661 - ko00000,ko01000 transferase hexapeptide repeat
GDEDEPGN_01197 1.59e-259 pbpX1 - - V - - - Beta-lactamase
GDEDEPGN_01198 3.1e-127 pdxK 2.7.1.35 - H ko:K00868 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko01000 Phosphomethylpyrimidine kinase
GDEDEPGN_01199 7.89e-124 - - - S - - - ECF-type riboflavin transporter, S component
GDEDEPGN_01200 4.6e-291 - - - S - - - Putative peptidoglycan binding domain
GDEDEPGN_01201 1.41e-108 - - - K - - - Acetyltransferase (GNAT) domain
GDEDEPGN_01202 0.0 yqjE 3.4.11.14, 3.4.11.4 - E ko:K01258,ko:K01263 - ko00000,ko01000,ko01002 Cleaves the N-terminal amino acid of tripeptides
GDEDEPGN_01203 1.13e-241 - - - L ko:K07478 - ko00000 AAA C-terminal domain
GDEDEPGN_01204 2.76e-86 spxA - - K ko:K16509 - ko00000 Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
GDEDEPGN_01205 0.0 treB - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
GDEDEPGN_01206 2.09e-129 treR - - K ko:K03486 - ko00000,ko03000 UTRA
GDEDEPGN_01207 0.0 treC 3.2.1.93 GH13 G ko:K01226 ko00500,map00500 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain protein
GDEDEPGN_01209 2.55e-177 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDEDEPGN_01210 6.73e-107 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDEDEPGN_01211 4.09e-80 - - - S ko:K07006 - ko00000 Pyridoxamine 5'-phosphate oxidase
GDEDEPGN_01212 4e-300 XK27_01810 - - S - - - Calcineurin-like phosphoesterase
GDEDEPGN_01218 5.95e-114 ymdB - - S - - - Macro domain protein
GDEDEPGN_01219 7e-242 mdtG2 - - EGP ko:K08161 - ko00000,ko02000 Transporter, major facilitator family protein
GDEDEPGN_01220 7.62e-223 - - - - - - - -
GDEDEPGN_01221 0.0 phoR 2.7.13.3 - T ko:K07636 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
GDEDEPGN_01222 6.08e-153 phoB - - T ko:K07658 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Transcriptional regulatory protein, C terminal
GDEDEPGN_01223 3.12e-135 - - - P ko:K02039 - ko00000 Plays a role in the regulation of phosphate uptake
GDEDEPGN_01224 1.68e-177 pstB 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GDEDEPGN_01225 4.1e-193 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphate transport system permease protein PstA
GDEDEPGN_01226 5.64e-201 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
GDEDEPGN_01227 2.34e-187 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 Phosphate
GDEDEPGN_01228 5.68e-34 - - - L - - - Phage integrase, N-terminal SAM-like domain
GDEDEPGN_01229 7.06e-102 yveB - - I - - - PAP2 superfamily
GDEDEPGN_01230 0.0 pepN 3.4.11.2 - E ko:K01256 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 aminopeptidase
GDEDEPGN_01231 2.2e-79 lysM - - M - - - LysM domain
GDEDEPGN_01232 0.0 - - - L - - - Transposase
GDEDEPGN_01233 4.92e-43 - - - L - - - Transposase DDE domain
GDEDEPGN_01234 0.0 dtpT - - U ko:K03305 - ko00000 amino acid peptide transporter
GDEDEPGN_01235 7.74e-61 - - - - - - - -
GDEDEPGN_01236 1.04e-48 ybcH - - D ko:K06889 - ko00000 Alpha beta
GDEDEPGN_01237 1.15e-155 ybcH - - D ko:K06889 - ko00000 Alpha beta
GDEDEPGN_01238 0.0 rumA_1 2.1.1.190, 2.1.1.35 - J ko:K00557,ko:K03215 - ko00000,ko01000,ko03009,ko03016 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GDEDEPGN_01239 7.99e-185 recX - - S ko:K03565 - ko00000,ko03400 Regulatory protein RecX
GDEDEPGN_01240 1.74e-111 - - - - - - - -
GDEDEPGN_01241 7.76e-98 - - - - - - - -
GDEDEPGN_01242 1.45e-180 hlyX - - S ko:K03699 - ko00000,ko02042 Transporter associated domain
GDEDEPGN_01243 0.0 prfC - - J ko:K02837 - ko00000,ko03012 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
GDEDEPGN_01244 8.42e-60 XK27_09445 - - S - - - Domain of unknown function (DUF1827)
GDEDEPGN_01245 0.0 clpE - - O ko:K03697 - ko00000,ko03110 Belongs to the ClpA ClpB family
GDEDEPGN_01246 2.6e-37 - - - - - - - -
GDEDEPGN_01247 1.29e-54 ptsH - - G ko:K11189 - ko00000,ko02000 phosphocarrier protein HPR
GDEDEPGN_01248 0.0 ptsI 2.7.3.9 - G ko:K08483 ko02060,map02060 ko00000,ko00001,ko01000,ko02000 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GDEDEPGN_01249 4.25e-85 spxA - - K ko:K16509 - ko00000 Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
GDEDEPGN_01250 1.5e-178 mecA - - NOT ko:K16511 - ko00000 Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
GDEDEPGN_01251 6.73e-208 coiA - - S ko:K06198 - ko00000 Competence protein
GDEDEPGN_01252 5.74e-148 yjbH - - Q - - - Thioredoxin
GDEDEPGN_01253 1.71e-143 - - - S - - - CYTH
GDEDEPGN_01254 1.7e-147 yjbM 2.7.6.5 - S ko:K07816 ko00230,map00230 ko00000,ko00001,ko01000 RelA SpoT domain protein
GDEDEPGN_01255 1.91e-195 nadK 2.7.1.23 - F ko:K00858 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GDEDEPGN_01256 9.29e-220 rluD2 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
GDEDEPGN_01257 0.0 mycA 4.2.1.53 - S ko:K10254 - ko00000,ko01000 Myosin-crossreactive antigen
GDEDEPGN_01258 3.77e-122 - - - S - - - SNARE associated Golgi protein
GDEDEPGN_01259 1.29e-190 - - - P ko:K02042 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDEDEPGN_01260 4.7e-169 phnB - - P ko:K02042 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDEDEPGN_01261 6.34e-180 phnC 3.6.3.28 - P ko:K02041 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
GDEDEPGN_01262 1.57e-208 phnD - - P ko:K02044 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphonate ABC transporter
GDEDEPGN_01264 3.92e-110 usp5 - - T - - - universal stress protein
GDEDEPGN_01265 1.02e-190 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
GDEDEPGN_01266 6.51e-114 - 2.7.1.200, 2.7.1.204 - G ko:K02773,ko:K20112 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GDEDEPGN_01267 4.83e-117 ntd 2.4.2.6 - F ko:K08728 ko00240,map00240 ko00000,ko00001,ko01000 Nucleoside
GDEDEPGN_01269 3.47e-19 - - - - ko:K07473 - ko00000,ko02048 -
GDEDEPGN_01270 1.03e-275 nagA 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Belongs to the metallo-dependent hydrolases superfamily. NagA family
GDEDEPGN_01271 0.0 - - - G - - - Belongs to the glycosyl hydrolase 31 family
GDEDEPGN_01272 1.2e-202 - - - I - - - alpha/beta hydrolase fold
GDEDEPGN_01273 7.8e-167 yibF - - S - - - overlaps another CDS with the same product name
GDEDEPGN_01274 1.69e-258 yibE - - S - - - overlaps another CDS with the same product name
GDEDEPGN_01275 3.47e-164 - - - - - - - -
GDEDEPGN_01276 2.43e-263 ddl 6.3.2.4 - F ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Belongs to the D-alanine--D-alanine ligase family
GDEDEPGN_01277 7.36e-291 - - - S - - - Cysteine-rich secretory protein family
GDEDEPGN_01278 7.26e-136 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
GDEDEPGN_01279 6.39e-21 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
GDEDEPGN_01280 7.21e-140 glnPH2 - - P ko:K02029,ko:K02030 - ko00000,ko00002,ko02000 ABC transporter permease
GDEDEPGN_01281 4.51e-171 gpmA 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GDEDEPGN_01282 1.72e-149 - - - - - - - -
GDEDEPGN_01283 1.98e-168 - - - - - - - -
GDEDEPGN_01284 1.68e-207 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
GDEDEPGN_01285 2.47e-138 pcp 3.4.19.3 - O ko:K01304 - ko00000,ko01000,ko01002 Removes 5-oxoproline from various penultimate amino acid residues except L-proline
GDEDEPGN_01286 0.0 yjbQ - - P ko:K03455,ko:K03499 - ko00000,ko02000 TrkA C-terminal domain protein
GDEDEPGN_01287 7.32e-232 - 3.2.1.96, 3.5.1.28 GH73 M ko:K01227,ko:K01447,ko:K13714,ko:K13731 ko00511,ko05100,map00511,map05100 ko00000,ko00001,ko01000 N-acetylmuramoyl-L-alanine amidase
GDEDEPGN_01288 2.09e-286 - - - NU - - - Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
GDEDEPGN_01290 7.39e-165 - - - S - - - SLAP domain
GDEDEPGN_01292 2.85e-54 - - - - - - - -
GDEDEPGN_01293 2.45e-65 - - - K - - - DNA-templated transcription, initiation
GDEDEPGN_01295 4.56e-191 - - - S - - - PD-(D/E)XK nuclease family transposase
GDEDEPGN_01296 6.35e-28 - - - S - - - PD-(D/E)XK nuclease family transposase
GDEDEPGN_01297 6.77e-139 - - - S - - - SLAP domain
GDEDEPGN_01298 1.05e-54 - - - S - - - Protein of unknown function (DUF2922)
GDEDEPGN_01299 1.21e-40 - - - - - - - -
GDEDEPGN_01300 5.61e-138 tag 3.2.2.20 - L ko:K01246 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 glycosylase
GDEDEPGN_01301 2.47e-107 - - - - - - - -
GDEDEPGN_01302 0.0 - - - S - - - Calcineurin-like phosphoesterase
GDEDEPGN_01303 0.0 asnB 6.3.5.4 - E ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 ko00000,ko00001,ko01000,ko01002 Asparagine synthase
GDEDEPGN_01304 0.0 yxbA 6.3.1.12 - S ko:K17810 - ko00000,ko01000 ATP-grasp enzyme
GDEDEPGN_01305 0.0 nrdD 1.1.98.6 - F ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Ribonucleoside-triphosphate reductase
GDEDEPGN_01306 1.35e-180 nrdG 1.97.1.4 - O ko:K04068 - ko00000,ko01000 Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GDEDEPGN_01307 3.41e-132 yitW - - S - - - Iron-sulfur cluster assembly protein
GDEDEPGN_01308 2.19e-292 XK27_04775 - - S ko:K09155 - ko00000 PAS domain
GDEDEPGN_01309 2.31e-277 yqjV - - EGP - - - Major Facilitator Superfamily
GDEDEPGN_01310 0.0 pepO - - O ko:K07386 - ko00000,ko01000,ko01002 Peptidase family M13
GDEDEPGN_01311 0.0 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
GDEDEPGN_01312 6.55e-97 - - - - - - - -
GDEDEPGN_01313 3.75e-48 - - - S - - - PFAM Archaeal ATPase
GDEDEPGN_01315 4.53e-76 - - - T ko:K07171 - ko00000,ko01000,ko02048 PemK-like, MazF-like toxin of type II toxin-antitoxin system
GDEDEPGN_01316 3.61e-60 - - - - - - - -
GDEDEPGN_01317 5.76e-66 - - - M - - - Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
GDEDEPGN_01318 3.82e-149 tnpA1 - - L - - - PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
GDEDEPGN_01319 3.62e-264 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
GDEDEPGN_01320 5.18e-135 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
GDEDEPGN_01321 4.4e-226 ydbI - - K - - - AI-2E family transporter
GDEDEPGN_01322 3.93e-134 - - - E - - - GDSL-like Lipase/Acylhydrolase
GDEDEPGN_01323 2.55e-26 - - - - - - - -
GDEDEPGN_01324 1.59e-315 - - - G ko:K16211 - ko00000,ko02000 Major Facilitator
GDEDEPGN_01325 8.64e-176 XK27_08845 - - S ko:K05833 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
GDEDEPGN_01326 4.76e-168 XK27_08840 - - U ko:K05832 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
GDEDEPGN_01327 9.61e-223 ABC-SBP - - S ko:K01989 - ko00000,ko00002,ko02000 ABC transporter
GDEDEPGN_01328 7.75e-170 ysaA 3.1.3.5, 3.8.1.2 - S ko:K01560,ko:K07025,ko:K08723 ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
GDEDEPGN_01329 7.2e-202 - - - P ko:K03284 - ko00000,ko02000 CorA-like Mg2+ transporter protein
GDEDEPGN_01330 9.52e-205 yvgN - - C - - - Aldo keto reductase
GDEDEPGN_01331 0.0 fusA1 - - J - - - elongation factor G
GDEDEPGN_01332 3.16e-192 - 3.1.3.102, 3.1.3.104 - S ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 haloacid dehalogenase-like hydrolase
GDEDEPGN_01333 1.07e-179 - - - EGP - - - Major Facilitator Superfamily
GDEDEPGN_01334 9.62e-247 ldhA 1.1.1.28 - C ko:K03778,ko:K18347 ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020 ko00000,ko00001,ko00002,ko01000,ko01504 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GDEDEPGN_01335 2.43e-93 coaA 2.7.1.33 - F ko:K00867 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Pantothenic acid kinase
GDEDEPGN_01336 0.0 prtB 3.4.21.96 - O ko:K01361 - ko00000,ko01000,ko01002,ko03110 Belongs to the peptidase S8 family
GDEDEPGN_01337 2.55e-223 dhaK 2.7.1.121 - G ko:K05878 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Dak1 domain
GDEDEPGN_01338 1.39e-120 dhaL 2.7.1.121 - S ko:K05879 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Dak2
GDEDEPGN_01339 4.92e-73 dhaM 2.7.1.121 - S ko:K05881 ko00561,map00561 ko00000,ko00001,ko01000,ko02000 PTS system fructose IIA component
GDEDEPGN_01340 1.22e-157 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
GDEDEPGN_01341 2.28e-21 - - - S - - - PD-(D/E)XK nuclease family transposase
GDEDEPGN_01342 1.18e-89 - - - S - - - PD-(D/E)XK nuclease family transposase
GDEDEPGN_01343 4.07e-140 - - - K - - - LysR family
GDEDEPGN_01344 0.0 - - - C - - - FMN_bind
GDEDEPGN_01345 2.52e-140 - - - K - - - LysR family
GDEDEPGN_01346 3.53e-287 - - - P ko:K03319 - ko00000 Sodium:sulfate symporter transmembrane region
GDEDEPGN_01347 0.0 - - - C - - - FMN_bind
GDEDEPGN_01348 0.0 ydgH - - S ko:K06994 - ko00000 MMPL family
GDEDEPGN_01349 3.76e-128 yobS - - K - - - Bacterial regulatory proteins, tetR family
GDEDEPGN_01350 2.68e-205 - 3.5.2.6 - V ko:K17836 ko00311,ko01130,ko01501,map00311,map01130,map01501 ko00000,ko00001,ko00002,ko01000,ko01504 Beta-lactamase enzyme family
GDEDEPGN_01351 1.4e-207 corA - - P ko:K03284 - ko00000,ko02000 CorA-like Mg2+ transporter protein
GDEDEPGN_01352 6.07e-310 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDEDEPGN_01353 0.0 - - - S - - - Zn-dependent metallo-hydrolase RNA specificity domain
GDEDEPGN_01354 5.62e-187 - - - P ko:K02026 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDEDEPGN_01355 3.85e-201 - - - P ko:K02025 - ko00000,ko00002,ko02000 ABC-type sugar transport systems, permease components
GDEDEPGN_01356 3.7e-259 malK - - P ko:K10112,ko:K17240 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ATPases associated with a variety of cellular activities
GDEDEPGN_01357 0.0 pepD1 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
GDEDEPGN_01358 7.24e-204 endA - - F ko:K15051 - ko00000 DNA RNA non-specific endonuclease
GDEDEPGN_01359 2.22e-231 - 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 EXOIII
GDEDEPGN_01360 5.96e-202 - - - K - - - NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
GDEDEPGN_01361 2.23e-150 yviA - - S - - - Protein of unknown function (DUF421)
GDEDEPGN_01362 2.94e-74 - - - S - - - Protein of unknown function (DUF3290)
GDEDEPGN_01363 1.92e-212 cas9 - - L ko:K09952 - ko00000,ko01000,ko02048 CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
GDEDEPGN_01364 1.44e-164 cas1 - - L ko:K15342 - ko00000,ko02048,ko03400 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
GDEDEPGN_01365 1.39e-53 cas2 - - L ko:K09951 - ko00000,ko02048 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
GDEDEPGN_01366 9.07e-51 - - - S - - - CRISPR-associated protein (Cas_Csn2)
GDEDEPGN_01367 2.34e-284 B4168_4126 - - L ko:K07493 - ko00000 Transposase
GDEDEPGN_01368 1.34e-22 - - - S - - - CRISPR-associated protein (Cas_Csn2)
GDEDEPGN_01369 6.94e-199 yqfL 2.7.11.33, 2.7.4.28 - F ko:K09773 - ko00000,ko01000 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
GDEDEPGN_01370 4.83e-30 rpsU - - J ko:K02970 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bS21 family
GDEDEPGN_01371 1.08e-92 yqeY - - S ko:K09117 - ko00000 YqeY-like protein
GDEDEPGN_01372 3.51e-224 phoH - - T ko:K06217 - ko00000 phosphate starvation-inducible protein PhoH
GDEDEPGN_01373 3.58e-129 ybeY - - S ko:K07042 - ko00000,ko03009 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
GDEDEPGN_01374 1.37e-216 era - - S ko:K03595 - ko00000,ko03009,ko03029 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
GDEDEPGN_01375 4.11e-173 recO - - L ko:K03584 ko03440,map03440 ko00000,ko00001,ko03400 Involved in DNA repair and RecF pathway recombination
GDEDEPGN_01376 9.03e-229 glyQ 6.1.1.14 - J ko:K01878 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 glycyl-tRNA synthetase alpha subunit
GDEDEPGN_01377 0.0 glyS 6.1.1.14 - J ko:K01879 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Glycyl-tRNA synthetase beta subunit
GDEDEPGN_01378 0.0 dnaG - - L ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
GDEDEPGN_01379 9e-255 sigA - - K ko:K03086 - ko00000,ko03021 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
GDEDEPGN_01380 2.06e-92 XK27_05225 - - S - - - Tetratricopeptide repeat protein
GDEDEPGN_01381 8.21e-57 hup - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
GDEDEPGN_01382 1.34e-314 der - - S ko:K03977 - ko00000,ko03009 GTPase that plays an essential role in the late steps of ribosome biogenesis
GDEDEPGN_01383 1.4e-281 rpsA - - J ko:K02945 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein S1
GDEDEPGN_01384 1.96e-148 cmk 2.7.4.25 - F ko:K00945 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the cytidylate kinase family. Type 1 subfamily
GDEDEPGN_01385 1.13e-41 - - - M - - - Lysin motif
GDEDEPGN_01386 8.49e-146 ribU - - U - - - Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
GDEDEPGN_01387 4.65e-168 rluB 5.4.99.22 - J ko:K06178 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
GDEDEPGN_01388 7.57e-135 scpB - - D ko:K06024 - ko00000,ko03036 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
GDEDEPGN_01389 1.81e-169 scpA - - D ko:K05896 - ko00000,ko03036 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
GDEDEPGN_01390 7.97e-82 ribT - - K ko:K02859 - ko00000 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
GDEDEPGN_01391 6.74e-213 xerD - - D ko:K04763 - ko00000,ko03036 recombinase XerD
GDEDEPGN_01392 1.21e-213 yitL - - S ko:K00243 - ko00000 S1 domain
GDEDEPGN_01393 0.0 pyk 2.7.1.40 - G ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the pyruvate kinase family
GDEDEPGN_01394 5.46e-233 pfkA 2.7.1.11 - F ko:K00850 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230 ko00000,ko00001,ko00002,ko01000,ko01009,ko03019 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
GDEDEPGN_01395 0.0 dnaE 2.7.7.7 - L ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase
GDEDEPGN_01396 1.25e-38 - - - S - - - Protein of unknown function (DUF2929)
GDEDEPGN_01397 0.0 yfkN 3.1.3.6, 3.1.4.16 - F ko:K01119 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the 5'-nucleotidase family
GDEDEPGN_01398 4.97e-102 - - - S - - - N-acetylmuramoyl-L-alanine amidase activity
GDEDEPGN_01399 5.77e-39 - - - S - - - Bacteriophage holin of superfamily 6 (Holin_LLH)
GDEDEPGN_01408 7.82e-158 - - - S - - - Phage minor structural protein
GDEDEPGN_01410 2.31e-134 - - - L - - - Phage tail tape measure protein TP901
GDEDEPGN_01418 8.25e-69 - - - S - - - Phage capsid family
GDEDEPGN_01419 1.59e-110 - 3.4.21.92 - OU ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S14 family
GDEDEPGN_01420 4.25e-167 - - - S - - - Phage portal protein
GDEDEPGN_01422 2.37e-263 - - - S - - - Phage Terminase
GDEDEPGN_01424 1.71e-72 - - - S - - - Phage terminase, small subunit
GDEDEPGN_01428 3.85e-49 - - - S - - - VRR_NUC
GDEDEPGN_01439 0.0 - - - S ko:K06919 - ko00000 Phage plasmid primase, P4
GDEDEPGN_01440 1e-23 - - - S - - - Protein of unknown function (DUF669)
GDEDEPGN_01441 4.6e-184 - - - L - - - Helicase C-terminal domain protein
GDEDEPGN_01443 9.54e-88 - - - S - - - AAA domain
GDEDEPGN_01444 8.93e-33 - - - S - - - HNH endonuclease
GDEDEPGN_01451 2.87e-93 - - - K ko:K07741 - ko00000 AntA/AntB antirepressor
GDEDEPGN_01452 1.7e-23 - - - - - - - -
GDEDEPGN_01455 1.8e-20 - - - K - - - Helix-turn-helix XRE-family like proteins
GDEDEPGN_01457 2.99e-31 - - - S - - - Hypothetical protein (DUF2513)
GDEDEPGN_01460 1.56e-166 - - - L - - - Belongs to the 'phage' integrase family
GDEDEPGN_01461 5.14e-38 rpmF - - J ko:K02911 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bL32 family
GDEDEPGN_01462 3.57e-47 - - - S - - - Lipopolysaccharide assembly protein A domain
GDEDEPGN_01463 3.65e-180 - - - S ko:K07124 - ko00000 Belongs to the short-chain dehydrogenases reductases (SDR) family
GDEDEPGN_01464 6.82e-223 rnz 3.1.26.11 - J ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
GDEDEPGN_01465 0.0 oatA - - I - - - Acyltransferase
GDEDEPGN_01466 1.88e-309 obg - - S ko:K03979 - ko00000,ko01000,ko03009 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
GDEDEPGN_01467 0.0 uvrC - - L ko:K03703 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
GDEDEPGN_01468 1.58e-140 yngC - - S - - - SNARE associated Golgi protein
GDEDEPGN_01469 0.0 yhdG - - E ko:K03294 - ko00000 Amino Acid
GDEDEPGN_01470 6.61e-230 gyaR 1.1.1.26, 1.1.1.399, 1.1.1.95 - CH ko:K00015,ko:K00058 ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GDEDEPGN_01471 1.4e-125 B4168_4126 - - L ko:K07493 - ko00000 Transposase
GDEDEPGN_01472 2.46e-128 - - - L - - - PFAM Integrase catalytic
GDEDEPGN_01473 6.08e-148 eriC - - P ko:K03281 - ko00000 chloride
GDEDEPGN_01474 6.55e-76 eriC - - P ko:K03281 - ko00000 chloride
GDEDEPGN_01475 1.45e-34 - - - K - - - FCD
GDEDEPGN_01476 1.43e-19 - - - K - - - FCD
GDEDEPGN_01477 4.37e-132 - - - GM - - - NmrA-like family
GDEDEPGN_01478 5.5e-154 pyrE 2.4.2.10 - F ko:K00762 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GDEDEPGN_01479 6.35e-164 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
GDEDEPGN_01480 1.52e-212 pyrD 1.3.1.14, 1.3.98.1 - F ko:K00226,ko:K17828 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
GDEDEPGN_01481 1.01e-122 pyrR 2.4.2.9 - F ko:K02825 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000,ko03000 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
GDEDEPGN_01482 9.05e-231 pyrB 2.1.3.2 - F ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
GDEDEPGN_01483 2.04e-313 pyrC 3.5.2.3 - F ko:K01465 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
GDEDEPGN_01484 3.47e-268 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase glutamine chain
GDEDEPGN_01485 0.0 carB 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase
GDEDEPGN_01486 0.0 lctP - - C ko:K03303 - ko00000,ko02000 L-lactate permease
GDEDEPGN_01488 4.63e-32 - - - - - - - -
GDEDEPGN_01489 6.72e-177 - - - EP - - - Plasmid replication protein
GDEDEPGN_01490 8.28e-102 - - - S - - - helix_turn_helix, Deoxyribose operon repressor
GDEDEPGN_01491 6.33e-221 ulaG - - S ko:K03476 ko00053,ko01100,ko01120,map00053,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Beta-lactamase superfamily domain
GDEDEPGN_01492 4.93e-80 - 2.7.1.194 - G ko:K02821 ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GDEDEPGN_01493 2.8e-294 sgaT - - S ko:K03475 ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko02000 PTS system sugar-specific permease component
GDEDEPGN_01494 4.82e-42 ulaB 2.7.1.194 - G ko:K02822 ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
GDEDEPGN_01495 2.85e-115 ulaD 4.1.1.85, 4.1.2.43 - G ko:K03078,ko:K08093 ko00030,ko00040,ko00053,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00040,map00053,map00680,map01100,map01120,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Orotidine 5'-phosphate decarboxylase / HUMPS family
GDEDEPGN_01496 1.78e-163 sga 5.1.3.22 - G ko:K03079 ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Xylose isomerase-like TIM barrel
GDEDEPGN_01497 1.52e-157 araD 5.1.3.4 - G ko:K03077 ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120 ko00000,ko00001,ko00002,ko01000 links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
GDEDEPGN_01498 5.85e-86 nt5e 3.1.3.18 - L ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 ko00000,ko00001,ko01000 haloacid dehalogenase-like hydrolase
GDEDEPGN_01499 0.0 xfp 4.1.2.22, 4.1.2.9 - G ko:K01621 ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120 ko00000,ko00001,ko01000 Phosphoketolase
GDEDEPGN_01500 9.78e-216 xfp 4.1.2.22, 4.1.2.9 - G ko:K01621 ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120 ko00000,ko00001,ko01000 Phosphoketolase
GDEDEPGN_01501 1.01e-22 - - - L - - - Transposase
GDEDEPGN_01502 7.51e-16 - - - L - - - Transposase
GDEDEPGN_01503 1.21e-72 - - - K - - - Acetyltransferase (GNAT) domain
GDEDEPGN_01505 4.4e-86 - - - K - - - LytTr DNA-binding domain
GDEDEPGN_01506 6.11e-66 - - - S - - - Protein of unknown function (DUF3021)
GDEDEPGN_01507 4.57e-135 - 3.5.1.124 - S ko:K03152 - ko00000,ko01000,ko01002 DJ-1/PfpI family
GDEDEPGN_01508 1.1e-152 - 3.8.1.2 - S ko:K01560 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
GDEDEPGN_01509 1.64e-99 - - - S ko:K07090 - ko00000 membrane transporter protein
GDEDEPGN_01510 4.65e-278 mnaA 5.1.3.14 - G ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 ko00000,ko00001,ko00002,ko01000,ko01005 Belongs to the UDP-N-acetylglucosamine 2-epimerase family
GDEDEPGN_01512 1.97e-315 chbC - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GDEDEPGN_01513 5.96e-283 yfmL - - L - - - DEAD DEAH box helicase
GDEDEPGN_01514 2.13e-167 lys - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
GDEDEPGN_01515 1.29e-295 - - - E ko:K03294 - ko00000 amino acid
GDEDEPGN_01516 0.0 - 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
GDEDEPGN_01517 5.83e-67 - - - L - - - PFAM transposase, IS4 family protein
GDEDEPGN_01518 2.02e-113 - - - L - - - PFAM transposase, IS4 family protein
GDEDEPGN_01519 0.0 - 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
GDEDEPGN_01520 8.59e-133 hpt 2.4.2.8 - F ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the purine pyrimidine phosphoribosyltransferase family
GDEDEPGN_01521 0.0 yhdP - - S - - - Transporter associated domain
GDEDEPGN_01522 2.14e-154 - - - C - - - nitroreductase
GDEDEPGN_01523 1.76e-52 - - - - - - - -
GDEDEPGN_01524 1.96e-113 ptbA 2.7.1.208 - G ko:K02755,ko:K02777,ko:K20107,ko:K20108 ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111 ko00000,ko00001,ko00002,ko01000,ko02000 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GDEDEPGN_01525 1.52e-103 - - - - - - - -
GDEDEPGN_01526 6.89e-190 glvR - - K ko:K03481 - ko00000,ko03000 Helix-turn-helix domain, rpiR family
GDEDEPGN_01527 4.34e-174 glnPH2 - - P ko:K02029,ko:K02030 - ko00000,ko00002,ko02000 ABC transporter permease
GDEDEPGN_01528 2.62e-176 - - - - - - - -
GDEDEPGN_01529 8.37e-161 - - - K - - - Bacterial regulatory proteins, tetR family
GDEDEPGN_01530 1.45e-232 prs2 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GDEDEPGN_01531 5.46e-181 noxC 1.5.1.39 - C ko:K19286 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 coenzyme F420-1:gamma-L-glutamate ligase activity
GDEDEPGN_01532 2.15e-253 - - - EGP - - - Major Facilitator Superfamily
GDEDEPGN_01534 2.7e-79 - - - - - - - -
GDEDEPGN_01536 5.02e-190 - - - K - - - Helix-turn-helix domain
GDEDEPGN_01537 4.69e-158 - - - S - - - Alpha/beta hydrolase family
GDEDEPGN_01538 2.62e-199 epsV - - S - - - glycosyl transferase family 2
GDEDEPGN_01539 7.53e-186 - - - S - - - Protein of unknown function (DUF1002)
GDEDEPGN_01540 2.94e-189 rnhA 3.1.26.4 - L ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GDEDEPGN_01541 6.14e-233 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
GDEDEPGN_01542 0.0 cls - - I ko:K06131 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GDEDEPGN_01543 2.29e-112 - - - - - - - -
GDEDEPGN_01544 1.23e-166 - - - S - - - (CBS) domain
GDEDEPGN_01545 2.93e-234 ldh 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily. LDH family
GDEDEPGN_01546 1.89e-134 pth 3.1.1.29 - J ko:K01056 - ko00000,ko01000,ko03012 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
GDEDEPGN_01547 0.0 mfd - - L ko:K03723 ko03420,map03420 ko00000,ko00001,ko01000,ko03400 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
GDEDEPGN_01548 7.32e-46 yabO - - J - - - S4 domain protein
GDEDEPGN_01549 7.52e-78 divIC - - D ko:K13052 - ko00000,ko03036 Septum formation initiator
GDEDEPGN_01550 1.61e-81 - - - J ko:K07571 - ko00000 S1 RNA binding domain
GDEDEPGN_01551 3.35e-308 tilS 2.4.2.8, 6.3.4.19 - J ko:K04075,ko:K15780 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000,ko03016 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
GDEDEPGN_01552 0.0 ftsH - - O ko:K03798 - ko00000,ko00002,ko01000,ko01002,ko03110 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GDEDEPGN_01553 3.91e-214 hslO - - O ko:K04083 - ko00000,ko03110 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
GDEDEPGN_01554 6.51e-247 dus - - J ko:K05540 - ko00000,ko01000,ko03016 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GDEDEPGN_01555 0.0 lysS 6.1.1.6 - J ko:K04567 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family
GDEDEPGN_01556 5.55e-80 - - - L ko:K07497 - ko00000 COG2963 Transposase and inactivated derivatives
GDEDEPGN_01570 5.39e-106 - - - L ko:K02315 - ko00000,ko03032 IstB-like ATP binding protein
GDEDEPGN_01571 1.95e-71 - - - S - - - calcium ion binding
GDEDEPGN_01572 3.84e-81 - - - S - - - ERF superfamily
GDEDEPGN_01578 3.28e-144 - - - K ko:K07741 - ko00000 BRO family, N-terminal domain
GDEDEPGN_01579 8.39e-07 - - - K - - - Helix-turn-helix XRE-family like proteins
GDEDEPGN_01580 5.63e-57 - - - K - - - Peptidase S24-like
GDEDEPGN_01583 2.14e-45 - - - V - - - Abi-like protein
GDEDEPGN_01584 6.35e-90 - - - L - - - Belongs to the 'phage' integrase family
GDEDEPGN_01601 6.8e-50 - - - S - - - Cytochrome B5
GDEDEPGN_01602 3.92e-215 arbZ - - I - - - Phosphate acyltransferases
GDEDEPGN_01603 5.48e-235 - - - M - - - Glycosyl transferase family 8
GDEDEPGN_01604 1.91e-236 - - - M - - - Glycosyl transferase family 8
GDEDEPGN_01605 7.23e-201 arbx - - M - - - Glycosyl transferase family 8
GDEDEPGN_01606 4.19e-192 - - - I - - - Acyl-transferase
GDEDEPGN_01608 1.09e-46 - - - - - - - -
GDEDEPGN_01610 3.98e-169 yycF - - K ko:K07668 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 response regulator
GDEDEPGN_01611 0.0 vicK 2.7.13.3 - T ko:K07652 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
GDEDEPGN_01612 0.0 yycH - - S - - - YycH protein
GDEDEPGN_01613 7.44e-192 yycI - - S - - - YycH protein
GDEDEPGN_01614 1.19e-188 vicX 3.1.26.11 - S ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 domain protein
GDEDEPGN_01615 3.17e-224 htrA 3.4.21.107 - O ko:K04771 ko01503,ko02020,map01503,map02020 ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 serine protease
GDEDEPGN_01616 7.1e-106 rlmH 2.1.1.177 - J ko:K00783 - ko00000,ko01000,ko03009 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
GDEDEPGN_01617 3.64e-46 rpsT - - J ko:K02968 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 16S ribosomal RNA
GDEDEPGN_01618 7.11e-57 rpsO - - J ko:K02956 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
GDEDEPGN_01619 0.0 rnjB - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GDEDEPGN_01620 9e-190 - - - - - - - -
GDEDEPGN_01621 5.76e-287 tuf - - J ko:K02358,ko:K15771 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GDEDEPGN_01622 1.09e-292 tig - - D ko:K03545 - ko00000 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
GDEDEPGN_01623 3.04e-297 clpX - - O ko:K03544 ko04112,map04112 ko00000,ko00001,ko03110 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
GDEDEPGN_01624 1.59e-136 engB - - D ko:K03978 - ko00000,ko03036 Necessary for normal cell division and for the maintenance of normal septation
GDEDEPGN_01625 2.58e-48 potE - - E - - - Amino Acid
GDEDEPGN_01626 1.27e-220 potE - - E - - - Amino Acid
GDEDEPGN_01627 6.25e-246 dapF 5.1.1.7 - E ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
GDEDEPGN_01628 0.0 lysC 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the aspartokinase family
GDEDEPGN_01629 1.39e-312 lysA 4.1.1.20 - E ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
GDEDEPGN_01630 5.02e-189 peb1A - - ET ko:K10039 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
GDEDEPGN_01631 2.62e-166 - - - F - - - glutamine amidotransferase
GDEDEPGN_01632 9.76e-312 steT - - E ko:K03294 - ko00000 amino acid
GDEDEPGN_01633 1.8e-305 steT - - E ko:K03294 - ko00000 amino acid
GDEDEPGN_01634 6.41e-194 - - - - - - - -
GDEDEPGN_01635 6.07e-223 ydhF - - S - - - Aldo keto reductase
GDEDEPGN_01636 0.0 ykpA - - S - - - ABC transporter, ATP-binding protein
GDEDEPGN_01637 4.37e-266 pepA - - E - - - M42 glutamyl aminopeptidase
GDEDEPGN_01638 7.33e-59 - - - - - - - -
GDEDEPGN_01639 5.43e-172 - - - - - - - -
GDEDEPGN_01640 6.86e-276 pmrA - - EGP ko:K08161 - ko00000,ko02000 MFS_1 like family
GDEDEPGN_01641 0.0 qacA - - EGP - - - Major Facilitator
GDEDEPGN_01642 0.0 pepF - - E ko:K08602 - ko00000,ko01000,ko01002 oligoendopeptidase F
GDEDEPGN_01643 8.61e-54 - - - S - - - Enterocin A Immunity
GDEDEPGN_01644 1.71e-172 - - - S ko:K07052 - ko00000 CAAX amino terminal protease
GDEDEPGN_01648 6.21e-60 - - - V ko:K20345 ko02024,map02024 ko00000,ko00001,ko02000 HlyD family secretion protein
GDEDEPGN_01649 0.0 comA - - V ko:K06147,ko:K06148,ko:K12292,ko:K20344 ko02010,ko02020,ko02024,map02010,map02020,map02024 ko00000,ko00001,ko01000,ko02000 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
GDEDEPGN_01650 1.64e-101 - - - K ko:K07707 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko02022 LytTr DNA-binding domain
GDEDEPGN_01651 1.72e-97 - 2.7.13.3 - T ko:K07706 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 GHKL domain
GDEDEPGN_01654 2.02e-35 - - - K ko:K07729 - ko00000,ko03000 Helix-turn-helix XRE-family like proteins
GDEDEPGN_01655 9.66e-12 - - - - - - - -
GDEDEPGN_01656 2.29e-274 metE 2.1.1.14 - E ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 methionine synthase, vitamin-B12 independent
GDEDEPGN_01657 3.98e-116 luxS 4.4.1.21 - H ko:K07173 ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111 ko00000,ko00001,ko00002,ko01000 Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
GDEDEPGN_01659 0.0 - - - S - - - Fibronectin type III domain
GDEDEPGN_01660 7.03e-307 tyrS 6.1.1.1 - J ko:K01866 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
GDEDEPGN_01661 9.39e-71 - - - - - - - -
GDEDEPGN_01663 0.0 pepC2 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 aminopeptidase
GDEDEPGN_01664 1.77e-157 ypgQ - - S ko:K06950 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
GDEDEPGN_01665 0.0 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
GDEDEPGN_01666 0.0 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
GDEDEPGN_01667 0.0 - - - L - - - Transposase DDE domain
GDEDEPGN_01668 2.64e-266 guaB 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
GDEDEPGN_01669 5.46e-191 oppB - - P ko:K15581 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC-type dipeptide oligopeptide nickel transport systems, permease components
GDEDEPGN_01670 7.82e-240 oppC - - EP ko:K15582 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC-type dipeptide oligopeptide nickel transport systems, permease components
GDEDEPGN_01671 7.1e-252 oppD - - P ko:K02031,ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
GDEDEPGN_01672 1.8e-190 oppF - - P ko:K10823 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
GDEDEPGN_01673 0.0 pepE 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 aminopeptidase
GDEDEPGN_01674 8.35e-94 hsp - - O ko:K13993 ko04141,map04141 ko00000,ko00001,ko03110 Belongs to the small heat shock protein (HSP20) family
GDEDEPGN_01675 5.69e-100 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GDEDEPGN_01676 1.67e-143 - - - - - - - -
GDEDEPGN_01678 1.66e-143 - - - E - - - Belongs to the SOS response-associated peptidase family
GDEDEPGN_01679 4.07e-245 trpS 6.1.1.2 - J ko:K01867 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
GDEDEPGN_01680 1.5e-116 comEB 3.5.4.12 - F ko:K01493 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko02044 MafB19-like deaminase
GDEDEPGN_01681 4.57e-135 - - - S ko:K06872 - ko00000 TPM domain
GDEDEPGN_01682 4.37e-173 mgtA 3.6.3.2 - P ko:K01531 - ko00000,ko01000 COG0474 Cation transport ATPase
GDEDEPGN_01683 0.0 mgtA 3.6.3.2 - P ko:K01531 - ko00000,ko01000 COG0474 Cation transport ATPase
GDEDEPGN_01684 3.02e-49 mgtA 3.6.3.2 - P ko:K01531 - ko00000,ko01000 COG0474 Cation transport ATPase
GDEDEPGN_01685 0.0 metG 6.1.1.10 - J ko:K01874 ko00450,ko00970,map00450,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GDEDEPGN_01686 1.11e-188 tatD - - L ko:K03424 - ko00000,ko01000 hydrolase, TatD family
GDEDEPGN_01687 5.17e-129 rnmV 3.1.26.8 - J ko:K05985 - ko00000,ko01000 Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
GDEDEPGN_01688 1.57e-203 ksgA 2.1.1.182 - J ko:K02528 - ko00000,ko01000,ko03009 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
GDEDEPGN_01689 1.42e-52 veg - - S - - - Biofilm formation stimulator VEG
GDEDEPGN_01690 5.03e-191 purR - - F ko:K09685 - ko00000,ko03000 pur operon repressor
GDEDEPGN_01691 5.17e-307 glmU 2.3.1.157, 2.7.7.23 - M ko:K04042 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GDEDEPGN_01692 5.52e-113 - - - - - - - -
GDEDEPGN_01693 0.0 - - - S - - - SLAP domain
GDEDEPGN_01694 5.4e-226 prs 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GDEDEPGN_01695 0.0 - 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
GDEDEPGN_01696 2.3e-169 yecA - - K - - - Helix-turn-helix domain, rpiR family
GDEDEPGN_01697 8.39e-314 ptcC - - U ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GDEDEPGN_01698 7.03e-216 - - - GK - - - ROK family
GDEDEPGN_01699 3.56e-56 - - - - - - - -
GDEDEPGN_01700 0.0 - - - S ko:K06885 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
GDEDEPGN_01701 1.75e-89 - - - S - - - Domain of unknown function (DUF1934)
GDEDEPGN_01702 2.38e-88 rpoE - - K ko:K03048 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko03021,ko03400 Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
GDEDEPGN_01703 0.0 pyrG 6.3.4.2 - F ko:K01937 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
GDEDEPGN_01704 6.58e-311 murA 2.5.1.7 - M ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GDEDEPGN_01705 4.61e-104 - - - K - - - acetyltransferase
GDEDEPGN_01706 1.69e-61 - - - F - - - AAA domain
GDEDEPGN_01707 0.0 pepDA - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
GDEDEPGN_01708 6.38e-191 msmR - - K - - - AraC-like ligand binding domain
GDEDEPGN_01709 8.34e-294 pbuX - - F ko:K03458,ko:K16169 - ko00000,ko02000 xanthine permease
GDEDEPGN_01710 9.63e-136 xpt 2.4.2.22 - F ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000 Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
GDEDEPGN_01711 6.18e-54 - - - K - - - Helix-turn-helix
GDEDEPGN_01712 0.0 guaA 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the synthesis of GMP from XMP
GDEDEPGN_01714 1.89e-129 - - - L - - - Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
GDEDEPGN_01715 1.91e-24 - - - D - - - GA module
GDEDEPGN_01716 1.62e-276 alr 5.1.1.1, 5.1.1.5 - E ko:K01775,ko:K20707 ko00473,ko01100,ko01502,map00473,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GDEDEPGN_01717 9.39e-80 acpS 2.7.8.7 - I ko:K00997 ko00770,map00770 ko00000,ko00001,ko01000 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
GDEDEPGN_01718 0.0 cshA 3.6.4.13 - F ko:K05592 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
GDEDEPGN_01719 0.0 murF 6.3.2.10 - M ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
GDEDEPGN_01720 1.07e-52 rpmE - - J ko:K02909 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L31
GDEDEPGN_01721 0.0 dexB 3.2.1.70 - G ko:K01215 - ko00000,ko01000 Alpha amylase, catalytic domain protein
GDEDEPGN_01722 1.64e-200 yhaX - - S - - - Sucrose-6F-phosphate phosphohydrolase
GDEDEPGN_01723 0.0 - - - E - - - amino acid
GDEDEPGN_01724 5.66e-297 glyA 2.1.2.1 - E ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
GDEDEPGN_01725 1.17e-56 - - - - - - - -
GDEDEPGN_01726 8.68e-69 - - - - - - - -
GDEDEPGN_01727 3.44e-238 - - - C - - - FMN-dependent dehydrogenase
GDEDEPGN_01728 9.69e-184 - - - P - - - Voltage gated chloride channel
GDEDEPGN_01729 2.65e-197 cinI - - S ko:K06889 - ko00000 Serine hydrolase (FSH1)
GDEDEPGN_01730 1.16e-269 - - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
GDEDEPGN_01732 3.31e-185 lipA - - I - - - Carboxylesterase family
GDEDEPGN_01733 1.82e-86 yusI 1.20.4.1 - P ko:K00537 - ko00000,ko01000 Belongs to the ArsC family
GDEDEPGN_01734 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
GDEDEPGN_01735 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
GDEDEPGN_01736 7.71e-188 supH - - S - - - haloacid dehalogenase-like hydrolase
GDEDEPGN_01737 4.3e-66 - - - - - - - -
GDEDEPGN_01738 8.51e-50 - - - - - - - -
GDEDEPGN_01739 2.1e-82 - - - S - - - Alpha beta hydrolase
GDEDEPGN_01740 2.19e-49 - - - S - - - Alpha beta hydrolase
GDEDEPGN_01741 0.0 pepX 3.4.14.11 - E ko:K01281 - ko00000,ko01000,ko01002 Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
GDEDEPGN_01742 2.88e-105 msrB 1.8.4.12 - O ko:K07305 - ko00000,ko01000 peptide methionine sulfoxide reductase
GDEDEPGN_01743 8.74e-62 - - - - - - - -
GDEDEPGN_01744 4.17e-65 - - - S - - - Phospholipase, patatin family
GDEDEPGN_01745 0.0 xfp 4.1.2.22, 4.1.2.9 - G ko:K01621 ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120 ko00000,ko00001,ko01000 Phosphoketolase
GDEDEPGN_01746 4.44e-174 - - - K ko:K22103 - ko00000,ko03000 DeoR C terminal sensor domain
GDEDEPGN_01747 2.9e-79 - - - S - - - Enterocin A Immunity
GDEDEPGN_01748 3.18e-198 - 3.1.3.102, 3.1.3.104 - S ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 hydrolase
GDEDEPGN_01749 6.63e-174 gntR - - K - - - UbiC transcription regulator-associated domain protein
GDEDEPGN_01750 1.01e-222 rihC 3.2.2.1 - F ko:K01239,ko:K01250,ko:K12700 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 Nucleoside
GDEDEPGN_01751 0.0 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
GDEDEPGN_01752 1.82e-161 rpiA 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
GDEDEPGN_01753 8.52e-215 rbsK 2.7.1.15 - H ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GDEDEPGN_01754 7.29e-209 - - - C - - - Domain of unknown function (DUF4931)
GDEDEPGN_01755 8.94e-308 srrA1 - - G ko:K02027,ko:K17244 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDEDEPGN_01756 2.32e-127 - - - S - - - Domain of unknown function (DUF4767)
GDEDEPGN_01757 1.01e-310 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
GDEDEPGN_01758 2.81e-193 - - - S - - - Uncharacterised protein, DegV family COG1307
GDEDEPGN_01759 1.31e-128 - - - I - - - PAP2 superfamily
GDEDEPGN_01760 5e-227 cbh 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
GDEDEPGN_01762 4.35e-221 - - - S - - - Conserved hypothetical protein 698
GDEDEPGN_01763 1.03e-34 - - - S - - - Pyridoxamine 5'-phosphate oxidase
GDEDEPGN_01764 6.34e-40 - - - S - - - Pyridoxamine 5'-phosphate oxidase
GDEDEPGN_01765 0.0 cadA 3.6.3.3, 3.6.3.5 - P ko:K01534 - ko00000,ko01000 E1-E2 ATPase
GDEDEPGN_01766 4.22e-41 - - - C - - - Heavy-metal-associated domain
GDEDEPGN_01767 1.45e-102 dpsB - - P - - - Belongs to the Dps family
GDEDEPGN_01768 2.6e-110 fnr - - K ko:K21562 - ko00000,ko03000 Transcriptional regulator, Crp Fnr family
GDEDEPGN_01769 1.85e-164 yobV3 - - K - - - WYL domain
GDEDEPGN_01770 5.61e-72 - - - S - - - pyridoxamine 5-phosphate
GDEDEPGN_01771 5.68e-110 dps - - P ko:K04047 - ko00000,ko03036 Belongs to the Dps family
GDEDEPGN_01772 1.43e-33 - - - L ko:K07497 - ko00000 hmm pf00665
GDEDEPGN_01773 0.0 thrS 6.1.1.3 - J ko:K01868 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GDEDEPGN_01774 3.09e-214 dnaI - - L ko:K11144 - ko00000,ko03032 Primosomal protein DnaI
GDEDEPGN_01775 5.62e-316 dnaB2 - - L ko:K03346 - ko00000,ko03032 Replication initiation and membrane attachment
GDEDEPGN_01776 3.04e-105 nrdR - - K ko:K07738 - ko00000,ko03000 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
GDEDEPGN_01777 2.16e-136 coaE 2.7.1.24 - F ko:K00859 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
GDEDEPGN_01778 2.24e-198 fpg 3.2.2.23, 4.2.99.18 - L ko:K10563 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
GDEDEPGN_01779 0.0 polA 2.7.7.7 - L ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 ko00000,ko00001,ko01000,ko03032,ko03400 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GDEDEPGN_01780 1.05e-40 - - - - - - - -
GDEDEPGN_01781 2.25e-209 msmX - - P ko:K10112 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
GDEDEPGN_01782 1.26e-288 B4168_4126 - - L ko:K07493 - ko00000 Transposase
GDEDEPGN_01785 4.81e-77 - - - S - - - SIR2-like domain
GDEDEPGN_01786 2.08e-118 - 3.1.21.3 - V ko:K01154 - ko00000,ko01000,ko02048 Type I restriction modification DNA specificity domain
GDEDEPGN_01787 0.0 hsdM 2.1.1.72 - V ko:K03427 - ko00000,ko01000,ko02048 type I restriction-modification system
GDEDEPGN_01788 5.22e-54 - - - S - - - RloB-like protein
GDEDEPGN_01789 1.35e-208 - - - S ko:K06926 - ko00000 AAA domain, putative AbiEii toxin, Type IV TA system
GDEDEPGN_01790 0.0 hsdR 3.1.21.3 - L ko:K01153 - ko00000,ko01000,ko02048 DEAD/DEAH box helicase
GDEDEPGN_01791 0.0 - - - S - - - SLAP domain
GDEDEPGN_01793 5.03e-76 - - - K - - - Helix-turn-helix domain
GDEDEPGN_01794 1.17e-144 ppiB 5.2.1.8 - G ko:K03768 - ko00000,ko01000,ko03110 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
GDEDEPGN_01795 1.05e-221 ppaC 3.6.1.1 - C ko:K15986 ko00190,map00190 ko00000,ko00001,ko01000 inorganic pyrophosphatase
GDEDEPGN_01796 1.11e-234 - - - K - - - Transcriptional regulator
GDEDEPGN_01797 0.0 parC - - L ko:K02621 - ko00000,ko01000,ko02048,ko03032,ko03036 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
GDEDEPGN_01798 0.0 parE - - L ko:K02622 - ko00000,ko01000,ko02048,ko03032,ko03036 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
GDEDEPGN_01799 9.39e-141 plsY 2.3.1.15 - I ko:K08591 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
GDEDEPGN_01800 0.0 snf - - KL - - - domain protein
GDEDEPGN_01801 0.0 lacZ 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 -beta-galactosidase
GDEDEPGN_01802 0.0 lacS - - G ko:K11104,ko:K16209 - ko00000,ko02000 Transporter
GDEDEPGN_01803 1.73e-209 lacR - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator
GDEDEPGN_01804 0.0 lacL 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
GDEDEPGN_01805 4.35e-185 lacM 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 beta-galactosidase
GDEDEPGN_01806 6.69e-239 galE 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family
GDEDEPGN_01807 1.16e-208 - - - S - - - Nucleotidyl transferase AbiEii toxin, Type IV TA system
GDEDEPGN_01808 1.12e-136 - - - K - - - Transcriptional regulator, AbiEi antitoxin
GDEDEPGN_01809 2.34e-241 - - - K ko:K02529 - ko00000,ko03000 Periplasmic binding protein-like domain
GDEDEPGN_01810 5.73e-153 - - - - - - - -
GDEDEPGN_01811 5.04e-154 - - - G - - - Antibiotic biosynthesis monooxygenase
GDEDEPGN_01812 1.13e-126 - - - - - - - -
GDEDEPGN_01813 6.93e-140 - - - K - - - LysR substrate binding domain
GDEDEPGN_01814 9.97e-08 - - - - - - - -
GDEDEPGN_01815 1.07e-287 - - - S - - - Sterol carrier protein domain
GDEDEPGN_01816 1.76e-122 citX 2.7.7.61 - HI ko:K05964 ko02020,map02020 ko00000,ko00001,ko01000 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
GDEDEPGN_01817 4.72e-134 arcC 2.7.2.2 - E ko:K00926 ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200 ko00000,ko00001,ko01000 Belongs to the carbamate kinase family
GDEDEPGN_01818 5.39e-84 argF 2.1.3.3 - E ko:K00611 ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
GDEDEPGN_01819 2.06e-298 arcA 3.5.3.6 - E ko:K01478 ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130 ko00000,ko00001,ko01000 Arginine
GDEDEPGN_01820 6.12e-177 lysR5 - - K - - - LysR substrate binding domain
GDEDEPGN_01821 0.0 - - - P - - - Cation transporter/ATPase, N-terminus
GDEDEPGN_01822 4.97e-64 - - - S - - - Metal binding domain of Ada
GDEDEPGN_01824 9.43e-300 - - - S - - - Phage minor structural protein
GDEDEPGN_01832 3.09e-22 - - - - - - - -
GDEDEPGN_01833 1.24e-125 - - - M - - - hydrolase, family 25
GDEDEPGN_01834 6.57e-141 msrA 1.8.4.11, 1.8.4.12 - O ko:K07304,ko:K12267 - ko00000,ko01000 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GDEDEPGN_01835 1.71e-150 - - - S - - - Peptidase family M23
GDEDEPGN_01836 6.21e-116 - - - V - - - HNH endonuclease
GDEDEPGN_01837 6.36e-173 - - - S - - - PFAM Archaeal ATPase
GDEDEPGN_01838 5.27e-314 yifK - - E ko:K03293 - ko00000 Amino acid permease
GDEDEPGN_01839 1.05e-309 aapA - - E ko:K03293,ko:K11737 - ko00000,ko02000 Amino acid permease
GDEDEPGN_01840 5.08e-149 sipS3 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
GDEDEPGN_01841 0.0 clpE - - O ko:K03697,ko:K04086 - ko00000,ko03110 AAA domain (Cdc48 subfamily)
GDEDEPGN_01842 7.86e-212 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
GDEDEPGN_01843 3.09e-304 pts13C - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GDEDEPGN_01844 1.68e-161 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
GDEDEPGN_01845 0.0 ylbB - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
GDEDEPGN_01846 1.96e-49 - - - - - - - -
GDEDEPGN_01847 0.0 ytgP - - S ko:K03328 - ko00000 Polysaccharide biosynthesis protein
GDEDEPGN_01848 1.34e-183 lysA2 - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
GDEDEPGN_01849 2.5e-172 - - - S - - - Protein of unknown function (DUF975)
GDEDEPGN_01850 1.97e-227 pbpX2 - - V - - - Beta-lactamase
GDEDEPGN_01851 6.8e-316 dltD - - M ko:K03740 ko01503,ko02020,ko05150,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01504 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
GDEDEPGN_01852 4.98e-48 dltC 6.1.1.13 - J ko:K14188 ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01000,ko01504 Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GDEDEPGN_01853 2.95e-304 dltB - - M ko:K03739 ko01503,ko02020,ko05150,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01504 MBOAT, membrane-bound O-acyltransferase family
GDEDEPGN_01854 0.0 dltA 6.1.1.13 - H ko:K03367 ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01000,ko01504 Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GDEDEPGN_01855 1.3e-26 - - - S - - - D-Ala-teichoic acid biosynthesis protein
GDEDEPGN_01856 1.42e-58 - - - - - - - -
GDEDEPGN_01857 5.11e-265 - - - S - - - Membrane
GDEDEPGN_01858 3.41e-107 ykuL - - S - - - (CBS) domain
GDEDEPGN_01859 0.0 cadA - - P - - - P-type ATPase
GDEDEPGN_01860 5.71e-263 napA - - P - - - Sodium/hydrogen exchanger family
GDEDEPGN_01861 2.49e-63 - - - D ko:K19159 - ko00000,ko02048 Antitoxin component of a toxin-antitoxin (TA) module
GDEDEPGN_01862 1.68e-55 yoeB - - S ko:K19158 - ko00000,ko01000,ko02048 YoeB-like toxin of bacterial type II toxin-antitoxin system
GDEDEPGN_01863 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC transporter transmembrane region
GDEDEPGN_01864 1.91e-200 mutR - - K - - - Helix-turn-helix XRE-family like proteins
GDEDEPGN_01865 1.05e-67 - - - - - - - -
GDEDEPGN_01866 3.62e-202 - - - EGP - - - Major facilitator Superfamily
GDEDEPGN_01867 1.49e-141 ywdE - - K ko:K20375 ko02024,map02024 ko00000,ko00001,ko03000 Transcriptional regulator
GDEDEPGN_01868 3.43e-155 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
GDEDEPGN_01869 5.14e-248 - - - S - - - DUF218 domain
GDEDEPGN_01870 0.0 - - - V ko:K02003,ko:K02004 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
GDEDEPGN_01871 0.0 ppc 4.1.1.31 - H ko:K01595 ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
GDEDEPGN_01872 5.9e-130 - - - S - - - ECF transporter, substrate-specific component
GDEDEPGN_01873 1.97e-255 tcsA - - S ko:K02058,ko:K07335 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein PnrA-like
GDEDEPGN_01874 4.57e-232 tcsA - - S ko:K02058,ko:K07335 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein PnrA-like
GDEDEPGN_01875 0.0 mglA 3.6.3.17 - S ko:K02056,ko:K06400 - ko00000,ko00002,ko01000,ko02000 ABC transporter
GDEDEPGN_01876 8.8e-262 mglC - - S ko:K02057 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
GDEDEPGN_01877 3.63e-221 yufQ - - S ko:K02057 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
GDEDEPGN_01878 3.08e-205 - - - S - - - Aldo/keto reductase family
GDEDEPGN_01879 1.15e-173 nagB 3.5.99.6 - G ko:K02564 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GDEDEPGN_01880 9.85e-154 dak 2.7.1.76 - F ko:K10353 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000 deoxynucleoside kinase
GDEDEPGN_01881 1.06e-159 dgk2 2.7.1.76 - F ko:K10353 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000 deoxynucleoside kinase
GDEDEPGN_01882 6.64e-94 - - - - - - - -
GDEDEPGN_01883 2.56e-179 - - - S - - - haloacid dehalogenase-like hydrolase
GDEDEPGN_01884 9.69e-292 pbuG - - S ko:K06901 - ko00000,ko02000 permease
GDEDEPGN_01885 3.85e-97 - - - S ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
GDEDEPGN_01886 4.03e-75 - - - S ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
GDEDEPGN_01887 8.34e-116 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
GDEDEPGN_01888 7.81e-169 - - - S - - - Uncharacterised protein family (UPF0236)
GDEDEPGN_01889 7.51e-205 - - - - - - - -
GDEDEPGN_01890 0.0 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 - C ko:K00135 ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Belongs to the aldehyde dehydrogenase family
GDEDEPGN_01891 2.73e-107 - - - F - - - Nucleoside 2-deoxyribosyltransferase
GDEDEPGN_01892 2.71e-200 plcR - - K ko:K20480 ko02024,map02024 ko00000,ko00001,ko03000 Helix-turn-helix
GDEDEPGN_01893 1.52e-195 - - - I - - - alpha/beta hydrolase fold
GDEDEPGN_01894 3.2e-143 - - - S - - - SNARE associated Golgi protein
GDEDEPGN_01895 8.32e-128 yjcK 2.3.1.128 - J ko:K03790 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
GDEDEPGN_01896 0.0 serS 6.1.1.11 - J ko:K01875 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
GDEDEPGN_01897 3.88e-52 - - - M - - - LPXTG-motif cell wall anchor domain protein
GDEDEPGN_01898 5e-53 - - - M - - - LPXTG-motif cell wall anchor domain protein
GDEDEPGN_01899 4.55e-221 - - - M - - - LPXTG-motif cell wall anchor domain protein
GDEDEPGN_01900 2.94e-166 - - - M - - - LPXTG-motif cell wall anchor domain protein
GDEDEPGN_01901 4.76e-248 tsaD 2.3.1.234 - J ko:K01409 - ko00000,ko01000,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
GDEDEPGN_01902 4.59e-124 rimI 2.3.1.128 - K ko:K03789 - ko00000,ko01000,ko03009 Ribosomal-protein-alanine acetyltransferase
GDEDEPGN_01903 3.69e-171 yeaZ 2.3.1.234 - O ko:K01409,ko:K14742 - ko00000,ko01000,ko03016 Universal bacterial protein YeaZ
GDEDEPGN_01904 8.72e-111 - - - S - - - ECF transporter, substrate-specific component
GDEDEPGN_01905 4.27e-167 fat 3.1.2.21 - I ko:K01071 ko00061,ko01100,map00061,map01100 ko00000,ko00001,ko01000,ko01004 Acyl-ACP thioesterase
GDEDEPGN_01906 3.05e-200 rsmI 2.1.1.198 - H ko:K07056 - ko00000,ko01000,ko03009 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GDEDEPGN_01907 1.4e-80 yabA - - L - - - Involved in initiation control of chromosome replication
GDEDEPGN_01908 8.4e-199 holB 2.7.7.7 - L ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
GDEDEPGN_01909 1.58e-70 yaaQ - - S - - - Cyclic-di-AMP receptor
GDEDEPGN_01910 1.15e-146 tmk 2.7.4.9 - F ko:K00943 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
GDEDEPGN_01911 1.18e-46 - - - S - - - Protein of unknown function (DUF2508)
GDEDEPGN_01912 9.21e-142 recR - - L ko:K06187 ko03440,map03440 ko00000,ko00001,ko03400 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
GDEDEPGN_01913 6.31e-68 yaaK - - S ko:K09747 - ko00000 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
GDEDEPGN_01914 4.55e-106 - - - M - - - family 8
GDEDEPGN_01915 0.0 dnaX 2.7.7.7 - L ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GDEDEPGN_01916 1.08e-117 tadA 3.5.4.33 - F ko:K11991 - ko00000,ko01000,ko03016 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
GDEDEPGN_01917 4.22e-211 - - - S - - - Protein of unknown function (DUF2974)
GDEDEPGN_01918 3.65e-141 glnP - - P ko:K10040 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
GDEDEPGN_01919 7.42e-123 glnM - - P ko:K10040 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
GDEDEPGN_01920 8.69e-190 glnH - - ET ko:K10039 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
GDEDEPGN_01921 1.19e-174 glnQ - - E ko:K10041 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
GDEDEPGN_01922 1.24e-144 udk 2.7.1.48 - F ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 Zeta toxin
GDEDEPGN_01923 0.0 - - - G - - - MFS/sugar transport protein
GDEDEPGN_01924 7.3e-131 ykoE - - S ko:K16925 - ko00000,ko00002,ko02000 ABC-type cobalt transport system, permease component
GDEDEPGN_01925 0.0 XK27_09605 - - V ko:K18892 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter transmembrane region
GDEDEPGN_01926 0.0 XK27_09600 - - V ko:K06147,ko:K18891 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, ATP-binding protein
GDEDEPGN_01927 2.53e-106 - - - K - - - Transcriptional regulator, MarR family
GDEDEPGN_01928 2.13e-151 dapE 3.5.1.18 - E ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 succinyl-diaminopimelate desuccinylase
GDEDEPGN_01929 6.51e-69 yitW - - S - - - Iron-sulfur cluster assembly protein
GDEDEPGN_01930 9.01e-198 sdaAA 4.3.1.17 - E ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko01000 L-serine dehydratase, iron-sulfur-dependent, alpha subunit
GDEDEPGN_01931 9.46e-159 - 4.3.1.17 - E ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko01000 Serine dehydratase beta chain
GDEDEPGN_01932 1.87e-58 - - - - - - - -
GDEDEPGN_01933 0.0 yjcA - - S ko:K19350 ko02010,map02010 ko00000,ko00001,ko01504,ko02000 ABC transporter
GDEDEPGN_01934 6.38e-154 B4168_4126 - - L ko:K07493 - ko00000 Transposase
GDEDEPGN_01935 3.86e-109 B4168_4126 - - L ko:K07493 - ko00000 Transposase
GDEDEPGN_01936 0.0 pulA 3.2.1.41 CBM48,GH13 G ko:K01200 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko01000 belongs to the glycosyl hydrolase 13 family
GDEDEPGN_01937 2.51e-52 - - - K ko:K03484 - ko00000,ko03000 Periplasmic binding protein domain
GDEDEPGN_01938 7.63e-43 - - - K ko:K03484 - ko00000,ko03000 Periplasmic binding protein domain
GDEDEPGN_01940 6.95e-29 - - - S ko:K08987 - ko00000 Protein of unknown function (DUF1304)
GDEDEPGN_01941 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
GDEDEPGN_01942 1.13e-201 - - - V ko:K06147 - ko00000,ko02000 ABC transporter transmembrane region
GDEDEPGN_01943 2.91e-83 - - - V ko:K06147 - ko00000,ko02000 ABC transporter transmembrane region
GDEDEPGN_01944 8.64e-85 yybA - - K - - - Transcriptional regulator
GDEDEPGN_01945 8e-108 XK27_03150 2.3.1.57 - K ko:K22441 - ko00000,ko01000 Acetyltransferase (GNAT) domain
GDEDEPGN_01946 5.59e-109 - - - S - - - Peptidase propeptide and YPEB domain
GDEDEPGN_01947 2.88e-98 ykoJ - - S - - - Peptidase propeptide and YPEB domain
GDEDEPGN_01948 2.37e-242 - - - T - - - GHKL domain
GDEDEPGN_01949 1.75e-168 - - - T - - - Transcriptional regulatory protein, C terminal
GDEDEPGN_01950 1.28e-228 pepR 3.4.11.5 - E ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 Releases the N-terminal proline from various substrates
GDEDEPGN_01951 0.0 - - - V - - - ABC transporter transmembrane region
GDEDEPGN_01952 0.0 ytgP - - S ko:K03328 - ko00000 Polysaccharide biosynthesis protein
GDEDEPGN_01953 2.52e-151 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
GDEDEPGN_01954 2.96e-42 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
GDEDEPGN_01955 4.84e-42 - - - - - - - -
GDEDEPGN_01956 9.14e-187 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 Phosphate
GDEDEPGN_01957 8.73e-205 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
GDEDEPGN_01958 8.63e-195 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphate transport system permease protein PstA
GDEDEPGN_01959 4.66e-179 pstB 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GDEDEPGN_01960 8.62e-138 - - - P ko:K02039 - ko00000 Plays a role in the regulation of phosphate uptake
GDEDEPGN_01961 1.56e-155 phoB - - T ko:K07658 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Transcriptional regulatory protein, C terminal
GDEDEPGN_01962 0.0 phoR 2.7.13.3 - T ko:K07636 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
GDEDEPGN_01963 7.13e-67 - - - K - - - helix_turn_helix gluconate operon transcriptional repressor
GDEDEPGN_01964 1.24e-188 - 5.2.1.13 - Q ko:K09835 ko00906,ko01100,ko01110,map00906,map01100,map01110 ko00000,ko00001,ko00002,ko01000 HI0933-like protein
GDEDEPGN_01965 1.51e-154 - - - C - - - 2Fe-2S iron-sulfur cluster binding domain
GDEDEPGN_01966 4.43e-179 sufC - - O ko:K09013 - ko00000,ko02000 FeS assembly ATPase SufC
GDEDEPGN_01967 6.22e-232 sufD - - O ko:K07033,ko:K09015 - ko00000 FeS assembly protein SufD
GDEDEPGN_01968 1.39e-224 sufS 2.8.1.7, 4.4.1.16 - E ko:K11717 ko00450,ko01100,map00450,map01100 ko00000,ko00001,ko01000 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
GDEDEPGN_01969 6.98e-78 nifU - - C ko:K04488 - ko00000 SUF system FeS assembly protein, NifU family
GDEDEPGN_01970 0.0 sufB - - O ko:K07033,ko:K09014 - ko00000 assembly protein SufB
GDEDEPGN_01971 8.12e-60 yitW - - S - - - Iron-sulfur cluster assembly protein
GDEDEPGN_01972 1.27e-311 mntH - - P ko:K03322 - ko00000,ko02000 H( )-stimulated, divalent metal cation uptake system
GDEDEPGN_01973 1.05e-222 - - - K - - - helix_turn_helix, arabinose operon control protein
GDEDEPGN_01974 1.64e-207 htpX - - O ko:K03799 - ko00000,ko00002,ko01000,ko01002 Belongs to the peptidase M48B family
GDEDEPGN_01975 6.78e-124 lemA - - S ko:K03744 - ko00000 LemA family
GDEDEPGN_01976 7.23e-244 ysdE - - P - - - Citrate transporter
GDEDEPGN_01977 3.34e-92 - - - S - - - Iron-sulphur cluster biosynthesis
GDEDEPGN_01978 0.0 glpQ 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 Membrane domain of glycerophosphoryl diester phosphodiesterase
GDEDEPGN_01979 9.69e-25 - - - - - - - -
GDEDEPGN_01980 1.34e-09 - - - S - - - Uncharacterised protein family (UPF0236)
GDEDEPGN_01981 8.22e-240 - - - M - - - Glycosyl transferase
GDEDEPGN_01982 2.59e-225 - - - G - - - Glycosyl hydrolases family 8
GDEDEPGN_01983 1.11e-154 yfbR - - S ko:K07023 - ko00000 HD containing hydrolase-like enzyme
GDEDEPGN_01984 8.8e-207 - - - L - - - HNH nucleases
GDEDEPGN_01985 9.73e-132 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GDEDEPGN_01986 0.0 typA - - T ko:K06207 - ko00000 GTP-binding protein TypA
GDEDEPGN_01987 1.12e-267 ftsW - - D ko:K03588 ko04112,map04112 ko00000,ko00001,ko02000,ko03036 Belongs to the SEDS family
GDEDEPGN_01988 9.94e-71 ylbG - - S - - - Uncharacterized protein conserved in bacteria (DUF2129)
GDEDEPGN_01989 5.21e-126 rsmD 2.1.1.171 - L ko:K08316 - ko00000,ko01000,ko03009 RNA methyltransferase, RsmD family
GDEDEPGN_01990 7.07e-107 coaD 2.7.7.3 - H ko:K00954 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
GDEDEPGN_01991 5.76e-244 lon - - T ko:K07177 ko02024,map02024 ko00000,ko00001,ko01002 Belongs to the peptidase S16 family
GDEDEPGN_01992 2.7e-126 comEA - - L ko:K02237 - ko00000,ko00002,ko02044 Competence protein ComEA
GDEDEPGN_01993 0.0 comEC - - S ko:K02238 - ko00000,ko00002,ko02044 Competence protein ComEC
GDEDEPGN_01994 1.23e-225 holA 2.7.7.7 - L ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III delta subunit
GDEDEPGN_01995 2.08e-33 - - - K - - - Helix-turn-helix domain
GDEDEPGN_01997 6.66e-27 - - - S - - - CAAX protease self-immunity
GDEDEPGN_01998 2.67e-35 - - - K ko:K07729 - ko00000,ko03000 Helix-turn-helix XRE-family like proteins
GDEDEPGN_02000 4.11e-124 potE - - E - - - thought to be involved in transport amino acids across the membrane
GDEDEPGN_02002 2.23e-189 - - - S - - - Putative ABC-transporter type IV
GDEDEPGN_02003 4.13e-38 - - - M - - - Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
GDEDEPGN_02004 2.9e-255 pgl 3.1.1.31 - G ko:K07404 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Lactonase, 7-bladed beta-propeller
GDEDEPGN_02005 2.32e-86 srlB 2.7.1.198 - G ko:K02781 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system glucitol/sorbitol-specific IIA component
GDEDEPGN_02006 2.19e-270 XK27_05220 - - S - - - AI-2E family transporter
GDEDEPGN_02007 2.12e-136 cspR 2.1.1.207 - J ko:K03216 - ko00000,ko01000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
GDEDEPGN_02008 3.12e-91 - - - S - - - Protein of unknown function (DUF1149)
GDEDEPGN_02009 0.0 ftsK - - D ko:K03466 - ko00000,ko03036 Belongs to the FtsK SpoIIIE SftA family
GDEDEPGN_02010 4.2e-284 ymfF - - S - - - Peptidase M16 inactive domain protein
GDEDEPGN_02011 1.06e-298 ymfH - - S - - - Peptidase M16
GDEDEPGN_02012 1.39e-171 fabG 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Enoyl-(Acyl carrier protein) reductase
GDEDEPGN_02013 1.63e-154 ymfM - - S ko:K15539 - ko00000 Helix-turn-helix domain
GDEDEPGN_02014 3.92e-123 pgsA 2.7.8.5 - I ko:K00995 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GDEDEPGN_02015 1.17e-248 recA - - L ko:K03553 ko03440,map03440 ko00000,ko00001,ko00002,ko03400 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GDEDEPGN_02016 3.52e-292 rny - - S ko:K18682 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Endoribonuclease that initiates mRNA decay
GDEDEPGN_02017 1.94e-268 tagO 2.7.8.33, 2.7.8.35 - M ko:K02851 - ko00000,ko01000,ko01003,ko01005 transferase
GDEDEPGN_02018 5.04e-154 yvyE 3.4.13.9 - S ko:K01271 - ko00000,ko01000,ko01002 YigZ family
GDEDEPGN_02019 2.68e-314 comFA - - L ko:K02240 - ko00000,ko00002,ko02044 Helicase C-terminal domain protein
GDEDEPGN_02020 9.44e-169 comFC - - S ko:K02242 - ko00000,ko00002,ko02044 Competence protein
GDEDEPGN_02021 1.55e-122 hpf - - J ko:K05808 - ko00000,ko03009 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GDEDEPGN_02022 0.0 secA - - U ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
GDEDEPGN_02023 2.24e-238 prfB - - J ko:K02836 - ko00000,ko03012 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
GDEDEPGN_02024 8.33e-27 - - - - - - - -
GDEDEPGN_02025 3.54e-230 hprK - - F ko:K06023 - ko00000,ko01000 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
GDEDEPGN_02026 4.04e-203 lgt - - M ko:K13292 - ko00000,ko01000 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
GDEDEPGN_02027 3.31e-239 gpsA 1.1.1.94 - I ko:K00057 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 Glycerol-3-phosphate dehydrogenase
GDEDEPGN_02028 3.42e-232 trxB 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
GDEDEPGN_02029 0.0 pgm 5.4.2.2 - G ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
GDEDEPGN_02030 0.0 uvrB - - L ko:K03702 ko03420,map03420 ko00000,ko00001,ko03400 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
GDEDEPGN_02031 0.0 uvrA - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
GDEDEPGN_02032 1.55e-117 - - - S - - - Short repeat of unknown function (DUF308)
GDEDEPGN_02033 8.18e-210 yvcJ - - S ko:K06958 - ko00000,ko03019 Displays ATPase and GTPase activities
GDEDEPGN_02034 1.61e-250 yvcK - - S - - - Required for morphogenesis under gluconeogenic growth conditions
GDEDEPGN_02035 8.59e-221 whiA - - K ko:K09762 - ko00000 May be required for sporulation
GDEDEPGN_02036 1.16e-128 clpP 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GDEDEPGN_02037 0.0 - - - S - - - SH3-like domain
GDEDEPGN_02038 3.16e-144 ybbL - - S ko:K02068 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
GDEDEPGN_02039 2.75e-167 ybbM - - S ko:K02069 - ko00000,ko00002,ko02000 Uncharacterised protein family (UPF0014)
GDEDEPGN_02040 5.35e-121 - - - S - - - Domain of unknown function (DUF4811)
GDEDEPGN_02041 0.0 ycnB - - U - - - Belongs to the major facilitator superfamily
GDEDEPGN_02042 5.38e-101 - - - K - - - MerR HTH family regulatory protein
GDEDEPGN_02043 3.23e-149 - - - V ko:K11050 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
GDEDEPGN_02044 6.46e-119 cylB - - V ko:K11051 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC-2 type transporter
GDEDEPGN_02045 3.8e-60 - - - K - - - LytTr DNA-binding domain
GDEDEPGN_02046 3.87e-43 - - - S - - - Protein of unknown function (DUF3021)
GDEDEPGN_02047 5.21e-181 - - - S - - - Cysteine-rich secretory protein family
GDEDEPGN_02048 0.0 ycaM - - E - - - amino acid
GDEDEPGN_02049 0.0 - - - - - - - -
GDEDEPGN_02051 9.26e-241 cggR - - K ko:K05311 - ko00000,ko03000 Putative sugar-binding domain
GDEDEPGN_02052 2.86e-244 gap 1.2.1.12 - G ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
GDEDEPGN_02053 2.86e-286 pgk 2.7.2.3 - F ko:K00927 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the phosphoglycerate kinase family
GDEDEPGN_02054 5.46e-183 tpiA 5.3.1.1 - G ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
GDEDEPGN_02055 1.17e-103 dapH 2.3.1.117, 2.3.1.89 - E ko:K00674,ko:K05822 ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
GDEDEPGN_02056 8.08e-281 hipO 3.5.1.47 - E ko:K05823 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
GDEDEPGN_02057 3.66e-225 dapA 4.3.3.7 - E ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GDEDEPGN_02058 6.89e-185 dapB 1.17.1.8 - E ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
GDEDEPGN_02059 7.42e-276 aspC - - E ko:K00841 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
GDEDEPGN_02060 1.05e-253 asd 1.2.1.11 - E ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GDEDEPGN_02061 4.2e-249 pbpX1 - - V - - - Beta-lactamase
GDEDEPGN_02062 0.0 - - - I - - - Protein of unknown function (DUF2974)
GDEDEPGN_02063 3.04e-53 - - - C - - - FMN_bind
GDEDEPGN_02064 3.85e-109 - - - - - - - -
GDEDEPGN_02065 5.27e-236 yumC 1.18.1.2, 1.19.1.1 - C ko:K21567 - ko00000,ko01000 Ferredoxin--NADP reductase
GDEDEPGN_02066 8.39e-151 dedA - - S ko:K03975 - ko00000 SNARE-like domain protein
GDEDEPGN_02067 2.15e-137 - - - S - - - Protein of unknown function (DUF1461)
GDEDEPGN_02068 1.1e-184 nagD 3.1.3.41 - G ko:K01101 ko00627,ko01120,map00627,map01120 ko00000,ko00001,ko01000 Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
GDEDEPGN_02069 3.75e-135 yutD - - S - - - Protein of unknown function (DUF1027)
GDEDEPGN_02070 0.0 sasH 3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45 - F ko:K01081,ko:K01119,ko:K07004,ko:K08693,ko:K11751 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the 5'-nucleotidase family
GDEDEPGN_02071 9.89e-74 - - - - - - - -
GDEDEPGN_02072 0.0 - 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 glycerophosphoryl diester phosphodiesterase
GDEDEPGN_02073 1.23e-231 ccpA - - K ko:K02529 - ko00000,ko03000 catabolite control protein A
GDEDEPGN_02074 1.13e-272 pepQ 3.4.13.9 - E ko:K01271 - ko00000,ko01000,ko01002 Creatinase/Prolidase N-terminal domain
GDEDEPGN_02075 3.7e-113 gtcA1 - - S - - - Teichoic acid glycosylation protein
GDEDEPGN_02076 5.14e-105 ykuP - - C ko:K03839 - ko00000 Flavodoxin
GDEDEPGN_02077 2.45e-211 map 3.4.11.18 - E ko:K01265 - ko00000,ko01000,ko01002 Methionine Aminopeptidase
GDEDEPGN_02078 1.99e-208 rbn - - S ko:K07058 - ko00000 Belongs to the UPF0761 family
GDEDEPGN_02079 3.22e-215 galU 2.7.7.9 - M ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 UTP-glucose-1-phosphate uridylyltransferase
GDEDEPGN_02080 2.12e-273 atoB 1.1.1.88, 2.3.1.9 - I ko:K00054,ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the thiolase family
GDEDEPGN_02081 8.22e-270 mvaA 1.1.1.88, 2.3.1.9 - C ko:K00054,ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the HMG-CoA reductase family
GDEDEPGN_02082 2.49e-277 mvaS 2.3.3.10 - I ko:K01641 ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Hydroxymethylglutaryl-CoA synthase
GDEDEPGN_02083 0.0 - - - L - - - Transposase
GDEDEPGN_02084 2.27e-71 - - - S - - - protein encoded in hypervariable junctions of pilus gene clusters
GDEDEPGN_02085 7.26e-35 - - - S - - - Protein conserved in bacteria
GDEDEPGN_02086 1.09e-74 - - - - - - - -
GDEDEPGN_02087 8.23e-112 - - - - - - - -
GDEDEPGN_02088 0.0 yheS_2 - - S ko:K18231,ko:K19349 ko02010,map02010 br01600,ko00000,ko00001,ko01504,ko02000 ATPases associated with a variety of cellular activities
GDEDEPGN_02089 5.74e-185 - - - S - - - DUF218 domain
GDEDEPGN_02090 1.06e-141 - - - - - - - -
GDEDEPGN_02091 7.81e-107 - - - - - - - -
GDEDEPGN_02092 1.28e-106 yicL - - EG - - - EamA-like transporter family
GDEDEPGN_02093 6.7e-211 - - - EG - - - EamA-like transporter family
GDEDEPGN_02094 5.7e-209 - - - EG - - - EamA-like transporter family
GDEDEPGN_02095 2.52e-52 - - - - - - - -
GDEDEPGN_02096 1.77e-93 def2 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins
GDEDEPGN_02097 1.05e-289 - - - N ko:K09384 - ko00000 Uncharacterized conserved protein (DUF2075)
GDEDEPGN_02098 1.36e-260 pbpX - - V - - - Beta-lactamase
GDEDEPGN_02099 0.0 - - - L - - - Helicase C-terminal domain protein
GDEDEPGN_02100 0.0 - - - E ko:K20265 ko02024,map02024 ko00000,ko00001,ko02000 amino acid
GDEDEPGN_02101 1.2e-202 xth 3.1.11.2 - L ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 exodeoxyribonuclease III
GDEDEPGN_02102 3.54e-300 - - - L ko:K07497 - ko00000 COG2963 Transposase and inactivated derivatives
GDEDEPGN_02103 1.59e-61 pspC - - KT ko:K03973 - ko00000,ko02048,ko03000 PspC domain
GDEDEPGN_02105 7.92e-306 dacA 3.4.16.4 - M ko:K07258 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01002,ko01011 Belongs to the peptidase S11 family
GDEDEPGN_02106 2.23e-197 nnrD 4.2.1.136, 5.1.99.6 - H ko:K17758,ko:K17759 - ko00000,ko01000 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
GDEDEPGN_02107 5.6e-129 - - - M - - - ErfK YbiS YcfS YnhG
GDEDEPGN_02108 0.0 argS 6.1.1.19 - J ko:K01887 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Arginyl-tRNA synthetase
GDEDEPGN_02109 6.03e-218 fba 4.1.2.13, 4.1.2.29 - G ko:K01624,ko:K03339 ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Fructose-1,6-bisphosphate aldolase, class II
GDEDEPGN_02110 1.03e-65 - - - EGP ko:K08368 - ko00000,ko02000 Sugar (and other) transporter
GDEDEPGN_02111 7.41e-136 - - - - - - - -
GDEDEPGN_02112 6.63e-147 crp2 - - K ko:K10914,ko:K21562 ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111 ko00000,ko00001,ko03000 helix_turn_helix, cAMP Regulatory protein
GDEDEPGN_02113 0.0 copA 3.6.3.3, 3.6.3.5, 3.6.3.54 - P ko:K01534,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 P-type ATPase
GDEDEPGN_02114 4.44e-65 - - - S - - - Cupredoxin-like domain
GDEDEPGN_02115 2.52e-76 - - - S - - - Cupredoxin-like domain
GDEDEPGN_02116 1.95e-46 - - - - - - - -
GDEDEPGN_02120 2.27e-179 - - - - - - - -
GDEDEPGN_02121 6.56e-118 - - - V - - - ABC transporter transmembrane region
GDEDEPGN_02122 5.06e-111 - - - - - - - -
GDEDEPGN_02123 0.0 - - - - - - - -
GDEDEPGN_02124 2.65e-107 - - - S - - - Fic/DOC family
GDEDEPGN_02125 0.0 potE - - E - - - Amino Acid
GDEDEPGN_02126 2.44e-285 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GDEDEPGN_02127 1.22e-310 lctO 1.13.12.4 - C ko:K00467,ko:K10530 ko00620,map00620 ko00000,ko00001,ko01000 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
GDEDEPGN_02128 6.66e-41 dapE 3.5.1.18 - E ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 succinyl-diaminopimelate desuccinylase
GDEDEPGN_02129 0.0 carB1 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase
GDEDEPGN_02130 9.73e-254 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase glutamine chain
GDEDEPGN_02131 2.28e-221 rluD 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
GDEDEPGN_02132 3.16e-102 lspA 3.4.23.36 - MU ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 This protein specifically catalyzes the removal of signal peptides from prolipoproteins
GDEDEPGN_02133 0.0 fhs 6.3.4.3 - F ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the formate--tetrahydrofolate ligase family
GDEDEPGN_02134 1.61e-70 - - - - - - - -
GDEDEPGN_02135 4.04e-94 - - - S - - - Domain of unknown function (DUF3284)
GDEDEPGN_02136 0.0 - 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
GDEDEPGN_02137 5.73e-154 - - - K ko:K03492 - ko00000,ko03000 UTRA
GDEDEPGN_02138 1.8e-284 pts23C - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GDEDEPGN_02139 0.0 pbg6 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
GDEDEPGN_02140 1.22e-174 ypbG 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
GDEDEPGN_02141 1.17e-110 yfhC - - C - - - nitroreductase
GDEDEPGN_02142 3.7e-258 XK27_00915 - - C - - - Luciferase-like monooxygenase
GDEDEPGN_02143 7.94e-114 - - - K - - - GNAT family
GDEDEPGN_02144 1.46e-161 - - - S - - - Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
GDEDEPGN_02146 6.04e-49 - - - - - - - -
GDEDEPGN_02147 0.0 - - - P ko:K06148 - ko00000,ko02000 ABC transporter
GDEDEPGN_02148 8.44e-306 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
GDEDEPGN_02149 2.69e-316 yifK - - E ko:K03293 - ko00000 Amino acid permease
GDEDEPGN_02150 3.53e-228 thyA 2.1.1.45 - F ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
GDEDEPGN_02151 5.55e-119 folA 1.5.1.3 - H ko:K00287 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
GDEDEPGN_02152 0.0 aha1 - - P ko:K12952 - ko00000,ko01000 E1-E2 ATPase
GDEDEPGN_02153 1.33e-225 - - - F ko:K15051 - ko00000 DNA/RNA non-specific endonuclease
GDEDEPGN_02154 4.37e-205 metQ - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the nlpA lipoprotein family
GDEDEPGN_02155 5.74e-243 metN - - P ko:K02071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GDEDEPGN_02156 2.34e-122 metI - - P ko:K02072 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
GDEDEPGN_02157 0.0 fumC 4.2.1.2 - C ko:K01679 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211 ko00000,ko00001,ko00002,ko01000 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
GDEDEPGN_02158 0.0 frdA 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
GDEDEPGN_02159 1.66e-217 ldh 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily. LDH family
GDEDEPGN_02160 0.0 pepC4 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
GDEDEPGN_02161 5.26e-171 - - - H - - - Aldolase/RraA
GDEDEPGN_02162 0.0 citP - - P ko:K03319 - ko00000 Sodium:sulfate symporter transmembrane region
GDEDEPGN_02163 8.12e-195 - - - I - - - Alpha/beta hydrolase family
GDEDEPGN_02164 5.17e-249 citC 6.2.1.22 - H ko:K01910 ko02020,map02020 ko00000,ko00001,ko01000 Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
GDEDEPGN_02165 1.6e-59 citD - - C ko:K01646 ko02020,map02020 ko00000,ko00001 Covalent carrier of the coenzyme of citrate lyase
GDEDEPGN_02166 3.46e-212 citE 4.1.3.34 - G ko:K01644 ko02020,map02020 ko00000,ko00001,ko01000 Belongs to the HpcH HpaI aldolase family
GDEDEPGN_02167 0.0 citF 2.8.3.10 - H ko:K01643 ko02020,map02020 ko00000,ko00001,ko01000 Citrate (pro-3S)-lyase alpha chain
GDEDEPGN_02168 7.19e-93 ytwI - - S - - - Protein of unknown function (DUF441)
GDEDEPGN_02169 1.46e-31 - - - - - - - -
GDEDEPGN_02170 3.51e-187 cbiQ - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 cobalt transport
GDEDEPGN_02171 0.0 ykoD - - P ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
GDEDEPGN_02172 5.38e-125 - - - S ko:K16924 - ko00000,ko00002,ko02000 UPF0397 protein
GDEDEPGN_02173 8.1e-87 - - - S - - - Domain of unknown function DUF1828
GDEDEPGN_02174 7.91e-14 - - - - - - - -
GDEDEPGN_02175 2.93e-67 - - - - - - - -
GDEDEPGN_02176 1.05e-226 citR - - K - - - Putative sugar-binding domain
GDEDEPGN_02177 0.0 - - - S - - - Putative threonine/serine exporter
GDEDEPGN_02179 1.51e-44 - - - - - - - -
GDEDEPGN_02180 7.7e-21 - - - - - - - -
GDEDEPGN_02181 1.85e-115 ybaK - - S ko:K03976 - ko00000,ko01000,ko03016 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GDEDEPGN_02182 1.38e-223 prmA - - J ko:K02687 - ko00000,ko01000,ko03009 Ribosomal protein L11 methyltransferase
GDEDEPGN_02183 6.77e-49 - - - - - - - -
GDEDEPGN_02184 0.0 relA 2.7.6.5 - KT ko:K00951 ko00230,map00230 ko00000,ko00001,ko01000 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GDEDEPGN_02185 1.8e-99 dtd - - J ko:K07560 - ko00000,ko01000,ko03016 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
GDEDEPGN_02186 2.03e-310 hisS 6.1.1.21 - J ko:K01892 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 histidyl-tRNA synthetase
GDEDEPGN_02187 0.0 aspS 6.1.1.12 - J ko:K01876 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
GDEDEPGN_02188 9.14e-283 aspC - - E ko:K00841 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
GDEDEPGN_02190 3.82e-276 coaBC 4.1.1.36, 6.3.2.5 - H ko:K01598,ko:K13038 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
GDEDEPGN_02191 1.19e-43 - - - S - - - reductase
GDEDEPGN_02192 2.98e-50 - - - S - - - reductase
GDEDEPGN_02193 6.32e-41 - - - S - - - reductase
GDEDEPGN_02194 1.77e-189 yxeH - - S - - - hydrolase
GDEDEPGN_02195 5.74e-69 - - - - - - - -
GDEDEPGN_02196 7.51e-174 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
GDEDEPGN_02197 1.38e-144 tal 2.2.1.2 - H ko:K00616 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Transaldolase/Fructose-6-phosphate aldolase
GDEDEPGN_02198 0.0 - - - G - - - PTS system sorbose-specific iic component
GDEDEPGN_02199 3.59e-69 - 2.7.1.191 - G ko:K02793 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system fructose IIA component
GDEDEPGN_02200 5.36e-100 - 2.7.1.191 - G ko:K02794 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system sorbose subfamily IIB component
GDEDEPGN_02202 5.28e-215 - - - GKT ko:K03491 - ko00000,ko03000 Mga helix-turn-helix domain
GDEDEPGN_02203 3.53e-63 hxlB 5.3.1.27 - M ko:K08094 ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230 ko00000,ko00001,ko00002,ko01000 SIS domain
GDEDEPGN_02204 1.55e-82 - - - M - - - SIS domain
GDEDEPGN_02205 8.46e-98 - - - S - - - Uncharacterised protein family UPF0047
GDEDEPGN_02206 1.88e-44 - 2.7.1.200 - G ko:K02774 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
GDEDEPGN_02207 3.94e-254 - - - G ko:K02775 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system sugar-specific permease component
GDEDEPGN_02208 3.05e-53 - 2.7.1.200 - GT ko:K02773 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GDEDEPGN_02209 2.39e-85 rpe 5.1.3.1 - G ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the ribulose-phosphate 3-epimerase family
GDEDEPGN_02210 1.98e-191 yhaH - - S - - - Protein of unknown function (DUF805)
GDEDEPGN_02211 2.89e-173 glnQ - - E ko:K17076 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
GDEDEPGN_02212 0.0 XK27_05795 - - P ko:K17073,ko:K17074 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
GDEDEPGN_02213 1.41e-155 yxlJ 3.2.2.21 - L ko:K03652 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Belongs to the DNA glycosylase MPG family
GDEDEPGN_02214 1.54e-84 yeaO - - S - - - Protein of unknown function, DUF488
GDEDEPGN_02215 9.4e-164 terC - - P - - - Integral membrane protein TerC family
GDEDEPGN_02216 5.09e-119 adaB 2.1.1.63 - L ko:K00567,ko:K10778,ko:K13531 - ko00000,ko01000,ko03000,ko03400 6-O-methylguanine DNA methyltransferase, DNA binding domain
GDEDEPGN_02217 1.24e-169 cobB - - K ko:K12410 - ko00000,ko01000 SIR2 family
GDEDEPGN_02219 5.94e-100 - - - S ko:K06889 - ko00000 X-Pro dipeptidyl-peptidase (S15 family)
GDEDEPGN_02220 2.25e-57 - - - K - - - Tetracycline repressor, C-terminal all-alpha domain
GDEDEPGN_02222 3.49e-113 - - - K - - - LysR substrate binding domain
GDEDEPGN_02223 6.46e-44 - - - S - - - Domain of unknown function (DUF4440)
GDEDEPGN_02224 1.17e-87 - - - GM - - - NAD(P)H-binding
GDEDEPGN_02225 1.64e-169 adh2 1.1.1.1 - E ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 alcohol dehydrogenase
GDEDEPGN_02226 1.44e-62 - - - S - - - Belongs to the short-chain dehydrogenases reductases (SDR) family
GDEDEPGN_02227 0.0 mutS1 - - L ko:K07456 ko03430,map03430 ko00000,ko00001,ko03400 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
GDEDEPGN_02228 1.24e-258 xerS - - L ko:K03733 - ko00000,ko03036 Belongs to the 'phage' integrase family
GDEDEPGN_02229 1.5e-90 - - - - - - - -
GDEDEPGN_02230 4.36e-142 XK27_00160 - - S - - - Domain of unknown function (DUF5052)
GDEDEPGN_02231 3.35e-269 - - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
GDEDEPGN_02232 1.28e-292 pbuG - - S ko:K06901 - ko00000,ko02000 permease
GDEDEPGN_02233 8.73e-187 - - - S - - - haloacid dehalogenase-like hydrolase
GDEDEPGN_02234 9.01e-287 - - - S ko:K07133 - ko00000 cog cog1373
GDEDEPGN_02235 3.87e-80 yneE - - K - - - Transcriptional regulator
GDEDEPGN_02236 2.18e-122 yneE - - K - - - Transcriptional regulator
GDEDEPGN_02237 3.58e-61 - - - S ko:K07124 - ko00000 Enoyl-(Acyl carrier protein) reductase
GDEDEPGN_02238 5.05e-11 - - - - - - - -
GDEDEPGN_02239 3.69e-54 - - - L ko:K07473 - ko00000,ko02048 Addiction module antitoxin, RelB DinJ family
GDEDEPGN_02240 8.74e-146 rex - - K ko:K01926 - ko00000,ko03000 Modulates transcription in response to changes in cellular NADH NAD( ) redox state
GDEDEPGN_02241 0.0 ydiF - - S ko:K06158 - ko00000,ko03012 ABC transporter, ATP-binding protein
GDEDEPGN_02242 0.0 spxB 1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8 - EH ko:K00156,ko:K00158,ko:K01577,ko:K01652 ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the TPP enzyme family
GDEDEPGN_02243 9.48e-261 frc 2.8.3.16 - C ko:K07749 - ko00000,ko01000 Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
GDEDEPGN_02244 3.06e-53 bbsF_1 2.8.3.19 - C ko:K18702 - ko00000,ko01000 Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
GDEDEPGN_02245 2.18e-112 - - - GKT - - - domain protein
GDEDEPGN_02246 0.0 - 3.2.1.170, 3.2.1.24 GH38 G ko:K01191,ko:K15524 ko00511,map00511 ko00000,ko00001,ko01000,ko04131 Glycosyl hydrolases family 38 N-terminal domain
GDEDEPGN_02247 4.34e-198 fptC - - U ko:K02770 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko02000 system, fructose-specific IIC component
GDEDEPGN_02248 5.84e-50 - - - G - - - Psort location Cytoplasmic, score 9.98
GDEDEPGN_02249 2.4e-54 - 2.7.1.202 - G ko:K02768 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GDEDEPGN_02250 0.0 pepD4 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
GDEDEPGN_02251 2.12e-132 lolD - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
GDEDEPGN_02252 1.05e-233 yxeA - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
GDEDEPGN_02253 1.45e-119 - - - K - - - Bacterial regulatory proteins, tetR family
GDEDEPGN_02254 2.75e-143 - - - G - - - phosphoglycerate mutase
GDEDEPGN_02255 8.05e-180 - - - S ko:K06889 - ko00000 Alpha/beta hydrolase family
GDEDEPGN_02256 1.45e-183 XK27_08125 - - S ko:K09861 - ko00000 Belongs to the UPF0246 family
GDEDEPGN_02258 8.25e-65 - - - V ko:K01990,ko:K01992 - ko00000,ko00002,ko02000 Transport permease protein
GDEDEPGN_02259 9.75e-80 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
GDEDEPGN_02261 3.5e-280 - - - L - - - Belongs to the 'phage' integrase family
GDEDEPGN_02262 4.04e-36 - - - - - - - -
GDEDEPGN_02263 1.33e-72 - - - - - - - -
GDEDEPGN_02264 1.74e-185 - - - S - - - Replication initiation factor
GDEDEPGN_02265 2.14e-138 - - - D - - - Ftsk spoiiie family protein
GDEDEPGN_02266 1.15e-121 apt 2.4.2.7 - F ko:K00759 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000,ko04147 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
GDEDEPGN_02267 0.0 recJ - - L ko:K07462 ko03410,ko03430,ko03440,map03410,map03430,map03440 ko00000,ko00001,ko01000,ko03400 Single-stranded-DNA-specific exonuclease RecJ
GDEDEPGN_02268 7e-131 srtA 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 sortase family
GDEDEPGN_02269 0.0 lepA - - M ko:K03596 ko05134,map05134 ko00000,ko00001 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
GDEDEPGN_02270 5.88e-278 dnaJ - - O ko:K03686 - ko00000,ko03029,ko03110 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
GDEDEPGN_02271 0.0 dnaK - - O ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Heat shock 70 kDa protein
GDEDEPGN_02272 3.74e-109 grpE - - O ko:K03687 - ko00000,ko03029,ko03110 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
GDEDEPGN_02273 1.48e-247 hrcA - - K ko:K03705 - ko00000,ko03000 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
GDEDEPGN_02274 5.35e-223 ribF 2.7.1.26, 2.7.7.2 - H ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the ribF family
GDEDEPGN_02275 1.64e-198 truB 5.4.99.25 - J ko:K03177,ko:K03483 - ko00000,ko01000,ko03000,ko03016 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
GDEDEPGN_02276 1.67e-79 rbfA - - J ko:K02834 - ko00000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
GDEDEPGN_02277 0.0 infB - - J ko:K02519 - ko00000,ko03012,ko03029 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
GDEDEPGN_02278 1.61e-64 ylxQ - - J - - - ribosomal protein
GDEDEPGN_02279 3.75e-63 ylxR - - K ko:K07742 - ko00000 Protein of unknown function (DUF448)
GDEDEPGN_02280 1.19e-259 nusA - - K ko:K02600 - ko00000,ko03009,ko03021 Participates in both transcription termination and antitermination
GDEDEPGN_02281 3.4e-108 rimP - - J ko:K09748 - ko00000,ko03009 Required for maturation of 30S ribosomal subunits
GDEDEPGN_02282 0.0 polC 2.7.7.7 - L ko:K03763 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GDEDEPGN_02283 0.0 proS 6.1.1.15 - J ko:K01881 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
GDEDEPGN_02284 6.38e-254 rseP - - M ko:K11749 ko02024,ko04112,map02024,map04112 ko00000,ko00001,ko01000,ko01002 zinc metalloprotease
GDEDEPGN_02285 3.93e-181 cdsA 2.7.7.41 - I ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 ko00000,ko00001,ko00002,ko01000 Belongs to the CDS family
GDEDEPGN_02286 6.38e-178 uppS 2.5.1.31 - H ko:K00806 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
GDEDEPGN_02287 8.22e-120 frr - - J ko:K02838 - ko00000,ko03012 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
GDEDEPGN_02288 5.86e-168 pyrH 2.7.4.22 - F ko:K09903 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphorylation of UMP to UDP
GDEDEPGN_02289 1.76e-235 tsf - - J ko:K02357 - ko00000,ko03012,ko03029 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
GDEDEPGN_02290 2.21e-180 rpsB - - J ko:K02967 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS2 family
GDEDEPGN_02291 2.03e-251 yabB 2.1.1.223 - L ko:K07461,ko:K15460 - ko00000,ko01000,ko03016 Methyltransferase small domain
GDEDEPGN_02292 1.65e-151 plsC 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Acyltransferase
GDEDEPGN_02293 4.94e-292 cfa 2.1.1.79 - M ko:K00574 - ko00000,ko01000 cyclopropane-fatty-acyl-phospholipid synthase
GDEDEPGN_02294 0.0 pepO - - O ko:K07386 - ko00000,ko01000,ko01002 Peptidase family M13
GDEDEPGN_02295 0.0 mdlB - - V ko:K06147,ko:K18890 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
GDEDEPGN_02296 0.0 mdlA - - V ko:K06148,ko:K18889 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
GDEDEPGN_02297 1.3e-40 XK26_06720 - - S ko:K09976 - ko00000 Uncharacterised protein family (UPF0154)
GDEDEPGN_02298 4.16e-51 ynzC - - S - - - UPF0291 protein
GDEDEPGN_02299 9.86e-146 lexA 3.4.21.88 - K ko:K01356 - ko00000,ko00002,ko01000,ko01002,ko03400 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GDEDEPGN_02300 7.18e-187 - - - E - - - GDSL-like Lipase/Acylhydrolase family
GDEDEPGN_02301 1.15e-154 ung2 3.2.2.27 - L ko:K21929 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Uracil-DNA glycosylase
GDEDEPGN_02302 4.96e-270 - - - S - - - SLAP domain
GDEDEPGN_02303 1.64e-74 rplS - - J ko:K02884 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
GDEDEPGN_02304 1.63e-173 trmD 2.1.1.228 - J ko:K00554 - ko00000,ko01000,ko03016 Belongs to the RNA methyltransferase TrmD family
GDEDEPGN_02305 2.08e-122 rimM - - J ko:K02860 - ko00000,ko03009 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
GDEDEPGN_02306 6.78e-60 rpsP - - J ko:K02959 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bS16 family
GDEDEPGN_02307 2.32e-290 ffh 3.6.5.4 - U ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko01000,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
GDEDEPGN_02308 5.56e-72 ylxM - - S ko:K09787 - ko00000 Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
GDEDEPGN_02309 0.0 ctrA - - E ko:K03294 - ko00000 amino acid
GDEDEPGN_02310 2.36e-157 aapA - - M - - - Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
GDEDEPGN_02311 7.44e-129 - - - L - - - An automated process has identified a potential problem with this gene model
GDEDEPGN_02312 4.1e-34 dnaQ 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
GDEDEPGN_02313 5.34e-77 tnpR1 - - L - - - Resolvase, N terminal domain
GDEDEPGN_02314 4.22e-185 - - - M - - - Rib/alpha-like repeat
GDEDEPGN_02315 0.0 - - - S ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
GDEDEPGN_02316 2.05e-115 - - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Cobalt transport protein
GDEDEPGN_02317 1.09e-223 pepI 3.4.11.5 - E ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 Releases the N-terminal proline from various substrates
GDEDEPGN_02318 8.19e-116 - - - G - - - Peptidase_C39 like family
GDEDEPGN_02319 9.23e-209 - - - M - - - NlpC/P60 family
GDEDEPGN_02320 1.68e-44 - - - G - - - Peptidase_C39 like family
GDEDEPGN_02321 1.58e-101 smpB - - J ko:K03664 - ko00000 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
GDEDEPGN_02322 0.0 rnr - - J ko:K12573 ko03018,map03018 ko00000,ko00001,ko01000,ko03016,ko03019 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
GDEDEPGN_02323 1.3e-40 secG - - U ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase
GDEDEPGN_02324 0.0 ltaS 2.7.8.20 - M ko:K19005 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
GDEDEPGN_02325 0.0 XK27_08315 - - M - - - Sulfatase
GDEDEPGN_02326 1.03e-145 plsY1 2.3.1.15 - I ko:K08591 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
GDEDEPGN_02327 9.78e-257 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
GDEDEPGN_02328 5.18e-128 - - - G - - - Aldose 1-epimerase
GDEDEPGN_02330 3.68e-176 ribD 1.1.1.193, 3.5.4.26 - H ko:K11752 ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024 ko00000,ko00001,ko00002,ko01000 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
GDEDEPGN_02331 3.05e-110 ribE 2.5.1.9 - H ko:K00793 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Riboflavin synthase
GDEDEPGN_02332 3.61e-288 ribBA 3.5.4.25, 4.1.99.12 - H ko:K14652 ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
GDEDEPGN_02333 1.91e-103 ribH 2.5.1.78 - H ko:K00794 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
GDEDEPGN_02334 2.43e-118 - 2.7.7.49 - L ko:K00986 - ko00000,ko01000 PFAM RNA-directed DNA polymerase (Reverse transcriptase)
GDEDEPGN_02335 1.16e-13 - - - L - - - Psort location Cytoplasmic, score
GDEDEPGN_02336 4.46e-226 iunH 3.2.2.1 - F ko:K01239 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 inosine-uridine preferring nucleoside hydrolase
GDEDEPGN_02337 1.01e-116 alkD - - L - - - DNA alkylation repair enzyme
GDEDEPGN_02338 0.0 pbg4 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
GDEDEPGN_02339 1.33e-165 - - - K ko:K03492 - ko00000,ko03000 UTRA domain
GDEDEPGN_02340 1.32e-74 pts20B 2.7.1.196, 2.7.1.205 - G ko:K02760 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
GDEDEPGN_02341 4.56e-78 celC 2.7.1.196, 2.7.1.205 - G ko:K02759 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose Cellobiose specific IIA subunit
GDEDEPGN_02342 2.72e-15 - - - - - - - -
GDEDEPGN_02343 2.36e-12 - - - S - - - Bacteriophage abortive infection AbiH
GDEDEPGN_02344 0.0 sacB 2.4.1.10, 2.4.1.9 GH68 M ko:K00692,ko:K20811 ko00500,ko01100,ko02020,map00500,map01100,map02020 ko00000,ko00001,ko01000,ko01003 Levansucrase/Invertase
GDEDEPGN_02348 5.5e-155 - - - - - - - -
GDEDEPGN_02349 9.18e-202 - - - C - - - Domain of unknown function (DUF4931)
GDEDEPGN_02350 3.58e-251 - - - S - - - Putative peptidoglycan binding domain
GDEDEPGN_02351 2.61e-23 - - - - - - - -
GDEDEPGN_02352 1.05e-119 - - - S - - - membrane
GDEDEPGN_02353 6.45e-93 - - - K - - - LytTr DNA-binding domain
GDEDEPGN_02355 1.2e-199 - 1.1.1.346 - S ko:K06221 - ko00000,ko01000 reductase
GDEDEPGN_02356 1.05e-45 - - - - - - - -
GDEDEPGN_02357 0.0 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative DNA-binding domain
GDEDEPGN_02358 1.66e-303 pyrP - - F ko:K02824 - ko00000,ko02000 Permease
GDEDEPGN_02359 1.51e-117 pyrR 2.4.2.9 - F ko:K02825 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000,ko03000 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
GDEDEPGN_02360 1.51e-123 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
GDEDEPGN_02361 6.01e-153 rsuA 5.4.99.19 - J ko:K06183 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
GDEDEPGN_02362 3.97e-57 - - - S - - - PD-(D/E)XK nuclease family transposase
GDEDEPGN_02363 1.06e-86 - - - S - - - GtrA-like protein
GDEDEPGN_02364 1.73e-219 yfdH - GT2 M ko:K12999 - ko00000,ko01000,ko01003,ko01005 Glycosyltransferase, group 2 family protein
GDEDEPGN_02365 3.33e-123 - - - S - - - Protein of unknown function (DUF3990)
GDEDEPGN_02366 2.09e-59 - - - - - - - -
GDEDEPGN_02367 9.25e-13 - - - S - - - PD-(D/E)XK nuclease family transposase
GDEDEPGN_02368 0.0 yoaB 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
GDEDEPGN_02369 1.73e-165 - - - S ko:K06926 - ko00000 AAA domain, putative AbiEii toxin, Type IV TA system
GDEDEPGN_02370 2.91e-67 - - - - - - - -
GDEDEPGN_02371 0.0 valS 6.1.1.9 - J ko:K01873 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
GDEDEPGN_02372 1.22e-306 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the folylpolyglutamate synthase family
GDEDEPGN_02373 1.06e-162 - - - S - - - Haloacid dehalogenase-like hydrolase
GDEDEPGN_02374 6.18e-150 radC - - L ko:K03630 - ko00000 DNA repair protein
GDEDEPGN_02375 8.26e-226 mreB - - D ko:K03569 - ko00000,ko02048,ko03036,ko04812 cell shape determining protein MreB
GDEDEPGN_02376 8.27e-189 mreC - - M ko:K03570 - ko00000,ko03036 Involved in formation and maintenance of cell shape
GDEDEPGN_02377 5.43e-122 mreD - - - ko:K03571 - ko00000,ko03036 -
GDEDEPGN_02378 1.4e-09 - - - S - - - Protein of unknown function (DUF4044)
GDEDEPGN_02379 1.02e-72 - - - S - - - Protein of unknown function (DUF3397)
GDEDEPGN_02380 5.63e-102 mraZ - - K ko:K03925 - ko00000 Belongs to the MraZ family
GDEDEPGN_02381 1.49e-223 rsmH 2.1.1.199 - J ko:K03438 - ko00000,ko01000,ko03009 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
GDEDEPGN_02382 6.55e-72 ftsL - - D - - - Cell division protein FtsL
GDEDEPGN_02383 0.0 pbpX - - M ko:K08724,ko:K12552,ko:K12556 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011 Penicillin-binding Protein
GDEDEPGN_02384 4.43e-224 mraY 2.7.8.13 - M ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GDEDEPGN_02385 0.0 murD 6.3.2.9 - M ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
GDEDEPGN_02386 1.65e-265 murG 2.4.1.227 GT28 M ko:K02563 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GDEDEPGN_02387 3.14e-194 divIB - - D ko:K03589 ko04112,map04112 ko00000,ko00001,ko03036 Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
GDEDEPGN_02388 1.54e-309 ftsA - - D ko:K03590 ko04112,map04112 ko00000,ko00001,ko03036,ko04812 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
GDEDEPGN_02389 2.52e-300 ftsZ - - D ko:K03531 ko04112,map04112 ko00000,ko00001,ko02048,ko03036,ko04812 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
GDEDEPGN_02390 1.43e-96 sepF - - D ko:K09772 - ko00000,ko03036 Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
GDEDEPGN_02391 2.42e-60 yggT - - S ko:K02221 - ko00000,ko02044 YGGT family
GDEDEPGN_02392 4.68e-191 ylmH - - S - - - S4 domain protein
GDEDEPGN_02393 6.3e-138 divIVA - - D ko:K04074 - ko00000,ko03036 DivIVA domain protein
GDEDEPGN_02394 0.0 ileS 6.1.1.5 - J ko:K01870 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
GDEDEPGN_02395 2.32e-43 cspA - - K ko:K03704 - ko00000,ko03000 'Cold-shock' DNA-binding domain
GDEDEPGN_02396 4.26e-133 nudF 3.6.1.13 - L ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 ADP-ribose pyrophosphatase
GDEDEPGN_02397 1.22e-55 - - - - - - - -
GDEDEPGN_02398 2.05e-163 mtnN 3.2.2.9 - E ko:K01243 ko00270,ko01100,ko01230,map00270,map01100,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GDEDEPGN_02399 1.62e-276 iscS 2.8.1.7 - E ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Aminotransferase class V
GDEDEPGN_02400 9.98e-75 XK27_04120 - - S - - - Putative amino acid metabolism
GDEDEPGN_02401 4.47e-278 mnmA 2.8.1.13 - J ko:K00566 ko04122,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
GDEDEPGN_02402 4.7e-163 pgm - - G - - - Phosphoglycerate mutase family
GDEDEPGN_02403 2.31e-148 - - - S - - - repeat protein
GDEDEPGN_02404 0.0 recD2 3.1.11.5 - L ko:K03581 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
GDEDEPGN_02405 0.0 - - - L - - - Nuclease-related domain
GDEDEPGN_02406 3.07e-235 ytlR - - I - - - Diacylglycerol kinase catalytic domain
GDEDEPGN_02407 0.0 rnjA - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GDEDEPGN_02408 5.22e-45 ykzG - - S - - - Belongs to the UPF0356 family

eggNOG-mapper v2.1.12 (Database: eggNOG v5.0.2, Mar. 2021 release)