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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
BMDPJNLG_00001	7.01e-160	aapA	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
BMDPJNLG_00002	2.87e-126	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
BMDPJNLG_00003	1.01e-33	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BMDPJNLG_00004	5.34e-77	tnpR1	-	-	L	-	-	-	Resolvase, N terminal domain
BMDPJNLG_00005	4.51e-60	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
BMDPJNLG_00006	5.3e-32	-	-	-	-	-	-	-	-
BMDPJNLG_00007	9.71e-47	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
BMDPJNLG_00008	7e-131	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
BMDPJNLG_00009	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
BMDPJNLG_00010	1.15e-121	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BMDPJNLG_00011	8.75e-197	-	-	-	-	-	-	-	-
BMDPJNLG_00012	0.0	malH	3.2.1.122	GH4	G	ko:K01232	ko00500,map00500	ko00000,ko00001,ko01000	Family 4 glycosyl hydrolase C-terminal domain
BMDPJNLG_00013	8.28e-176	-	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
BMDPJNLG_00014	4.71e-239	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase, type I
BMDPJNLG_00015	3.61e-85	-	-	-	L	-	-	-	DDE superfamily endonuclease
BMDPJNLG_00016	4.78e-261	-	-	-	S	-	-	-	Domain of unknown function (DUF389)
BMDPJNLG_00017	2.82e-125	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
BMDPJNLG_00018	6.49e-137	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
BMDPJNLG_00021	8.95e-70	-	-	-	K	-	-	-	LytTr DNA-binding domain
BMDPJNLG_00022	9.29e-51	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
BMDPJNLG_00023	1.08e-217	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
BMDPJNLG_00024	2.25e-30	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	domain protein
BMDPJNLG_00025	2.8e-25	-	-	-	V	ko:K01990,ko:K01992	-	ko00000,ko00002,ko02000	Transport permease protein
BMDPJNLG_00026	9.75e-80	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
BMDPJNLG_00028	3.5e-280	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
BMDPJNLG_00029	4.04e-36	-	-	-	-	-	-	-	-
BMDPJNLG_00030	1.33e-72	-	-	-	-	-	-	-	-
BMDPJNLG_00031	1.74e-185	-	-	-	S	-	-	-	Replication initiation factor
BMDPJNLG_00032	2.67e-180	-	-	-	D	-	-	-	Ftsk spoiiie family protein
BMDPJNLG_00033	1.45e-59	-	-	-	-	-	-	-	-
BMDPJNLG_00034	2.5e-136	fabK	1.3.1.9	-	S	ko:K02371	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Nitronate monooxygenase
BMDPJNLG_00035	8.45e-102	pct	2.8.3.1	-	I	ko:K01026	ko00620,ko00640,ko00643,ko01100,ko01120,map00620,map00640,map00643,map01100,map01120	ko00000,ko00001,ko01000	Coenzyme A transferase
BMDPJNLG_00036	5.53e-203	pct	2.8.3.1	-	I	ko:K01026	ko00620,ko00640,ko00643,ko01100,ko01120,map00620,map00640,map00643,map01100,map01120	ko00000,ko00001,ko01000	Coenzyme A transferase
BMDPJNLG_00037	5.38e-184	-	-	-	K	-	-	-	LysR substrate binding domain
BMDPJNLG_00038	1.47e-70	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BMDPJNLG_00039	1.41e-97	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
BMDPJNLG_00041	3.64e-53	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
BMDPJNLG_00042	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
BMDPJNLG_00043	6.55e-97	-	-	-	-	-	-	-	-
BMDPJNLG_00044	3.75e-48	-	-	-	S	-	-	-	PFAM Archaeal ATPase
BMDPJNLG_00046	4.53e-76	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
BMDPJNLG_00047	3.61e-60	-	-	-	-	-	-	-	-
BMDPJNLG_00048	1.47e-303	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
BMDPJNLG_00049	3.46e-32	-	-	-	S	-	-	-	Alpha beta hydrolase
BMDPJNLG_00050	0.0	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
BMDPJNLG_00051	7.1e-136	ybbB	-	-	S	-	-	-	Protein of unknown function (DUF1211)
BMDPJNLG_00052	1.43e-309	lctO	1.13.12.4	-	C	ko:K00467,ko:K10530	ko00620,map00620	ko00000,ko00001,ko01000	L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
BMDPJNLG_00053	7.68e-63	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
BMDPJNLG_00054	5.01e-150	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
BMDPJNLG_00055	6.51e-69	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
BMDPJNLG_00056	7.73e-199	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
BMDPJNLG_00057	9.46e-159	-	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
BMDPJNLG_00059	1.02e-19	-	-	-	S	-	-	-	Phage portal protein
BMDPJNLG_00061	6.8e-273	-	-	-	S	-	-	-	Phage Terminase
BMDPJNLG_00064	6.95e-71	-	-	-	L	-	-	-	Phage terminase, small subunit
BMDPJNLG_00065	3.73e-80	-	-	-	L	-	-	-	HNH nucleases
BMDPJNLG_00066	2.57e-108	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BMDPJNLG_00067	8.08e-160	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BMDPJNLG_00068	1.25e-17	-	-	-	-	-	-	-	-
BMDPJNLG_00069	2.77e-220	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase
BMDPJNLG_00070	1.04e-41	-	-	-	-	-	-	-	-
BMDPJNLG_00072	3.65e-90	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
BMDPJNLG_00073	1.08e-145	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
BMDPJNLG_00074	4.51e-77	psiE	-	-	S	ko:K13256	-	ko00000	Phosphate-starvation-inducible E
BMDPJNLG_00076	6.58e-175	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
BMDPJNLG_00077	1.22e-289	amt	-	-	P	ko:K03320	-	ko00000,ko02000	ammonium transporter
BMDPJNLG_00078	7.82e-80	-	-	-	-	-	-	-	-
BMDPJNLG_00079	0.0	-	-	-	L	ko:K03724	-	ko00000,ko01000,ko03400	DEAD DEAH box helicase
BMDPJNLG_00080	4.13e-310	-	-	-	P	-	-	-	P-loop Domain of unknown function (DUF2791)
BMDPJNLG_00081	0.0	-	-	-	S	-	-	-	TerB-C domain
BMDPJNLG_00082	0.0	pckA	4.1.1.49	-	H	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Phosphoenolpyruvate carboxykinase
BMDPJNLG_00083	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
BMDPJNLG_00084	6.94e-202	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
BMDPJNLG_00085	9.05e-78	apfA	3.6.1.61	-	F	ko:K18445	ko00230,map00230	ko00000,ko00001,ko01000	Nudix hydrolase
BMDPJNLG_00086	3.36e-42	-	-	-	-	-	-	-	-
BMDPJNLG_00087	2.53e-100	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
BMDPJNLG_00088	5.26e-36	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
BMDPJNLG_00089	2.7e-277	mtlD	1.1.1.17	-	C	ko:K00009	ko00051,map00051	ko00000,ko00001,ko01000	mannitol-1-phosphate 5-dehydrogenase activity
BMDPJNLG_00090	4.73e-102	mtlF	2.7.1.197	-	G	ko:K02798	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BMDPJNLG_00091	0.0	mtlA	2.7.1.197	-	G	ko:K02799,ko:K02800	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
BMDPJNLG_00092	0.0	mtlR	-	-	K	ko:K03483	-	ko00000,ko03000	Mga helix-turn-helix domain
BMDPJNLG_00093	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
BMDPJNLG_00094	1.74e-295	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
BMDPJNLG_00095	9.97e-306	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
BMDPJNLG_00096	5.88e-311	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
BMDPJNLG_00097	8.01e-85	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
BMDPJNLG_00098	2.94e-203	-	-	-	K	-	-	-	Transcriptional regulator
BMDPJNLG_00099	1.31e-81	-	-	-	S	-	-	-	Domain of unknown function (DUF956)
BMDPJNLG_00100	3.51e-222	manN	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	system, mannose fructose sorbose family IID component
BMDPJNLG_00101	9.65e-181	manY	-	-	G	ko:K02746,ko:K02795	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system
BMDPJNLG_00102	2.72e-236	manL	2.7.1.191	-	G	ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
BMDPJNLG_00104	9.39e-195	-	-	-	-	-	-	-	-
BMDPJNLG_00106	3.25e-315	-	-	-	M	-	-	-	Glycosyl transferase
BMDPJNLG_00107	1.03e-262	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
BMDPJNLG_00108	8.66e-85	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
BMDPJNLG_00109	3.46e-18	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
BMDPJNLG_00110	5.66e-16	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
BMDPJNLG_00111	0.0	-	-	-	L	-	-	-	PLD-like domain
BMDPJNLG_00112	5.97e-55	-	-	-	S	-	-	-	SnoaL-like domain
BMDPJNLG_00113	6.13e-70	-	-	-	K	-	-	-	sequence-specific DNA binding
BMDPJNLG_00114	8.71e-31	-	-	-	G	-	-	-	Ribose/Galactose Isomerase
BMDPJNLG_00115	5.51e-35	-	-	-	-	-	-	-	-
BMDPJNLG_00116	2.25e-241	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
BMDPJNLG_00117	0.0	uvrA2	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC, A subunit
BMDPJNLG_00118	3.54e-123	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
BMDPJNLG_00120	2.32e-313	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
BMDPJNLG_00121	0.0	-	-	-	L	-	-	-	Plasmid pRiA4b ORF-3-like protein
BMDPJNLG_00122	1.28e-226	-	-	-	S	-	-	-	PFAM Archaeal ATPase
BMDPJNLG_00123	3.11e-250	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
BMDPJNLG_00124	4.95e-164	citG	2.4.2.52	-	H	ko:K05966	ko02020,map02020	ko00000,ko00001,ko01000	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
BMDPJNLG_00125	4.34e-166	-	-	-	S	-	-	-	Peptidase family M23
BMDPJNLG_00126	5.37e-106	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
BMDPJNLG_00127	2.8e-159	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
BMDPJNLG_00128	4.7e-195	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BMDPJNLG_00129	2.86e-307	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
BMDPJNLG_00130	1.25e-80	lexA	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator, GntR family
BMDPJNLG_00131	5.4e-161	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
BMDPJNLG_00132	1.65e-180	-	-	-	-	-	-	-	-
BMDPJNLG_00133	8.48e-175	-	-	-	-	-	-	-	-
BMDPJNLG_00134	1.91e-107	-	-	-	-	-	-	-	-
BMDPJNLG_00135	3.49e-36	-	-	-	-	-	-	-	-
BMDPJNLG_00136	1.27e-133	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
BMDPJNLG_00137	4.01e-184	-	-	-	-	-	-	-	-
BMDPJNLG_00138	4.4e-215	-	-	-	-	-	-	-	-
BMDPJNLG_00139	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
BMDPJNLG_00140	1.28e-150	-	3.1.3.102, 3.1.3.104, 3.1.3.23	-	G	ko:K07757,ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sucrose-6F-phosphate phosphohydrolase
BMDPJNLG_00141	4.87e-236	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
BMDPJNLG_00142	6.67e-261	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
BMDPJNLG_00143	5.87e-228	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
BMDPJNLG_00144	2.12e-173	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	GHMP kinases N terminal domain
BMDPJNLG_00145	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
BMDPJNLG_00146	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
BMDPJNLG_00147	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
BMDPJNLG_00148	9.62e-116	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
BMDPJNLG_00149	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
BMDPJNLG_00150	6.91e-149	dnaD	-	-	L	ko:K02086	-	ko00000	DnaD domain protein
BMDPJNLG_00151	5.5e-148	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BMDPJNLG_00152	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
BMDPJNLG_00153	8.47e-152	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
BMDPJNLG_00154	1.18e-139	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
BMDPJNLG_00155	1.85e-90	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
BMDPJNLG_00156	5.87e-278	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
BMDPJNLG_00157	6.74e-309	cpdA	-	-	S	-	-	-	Calcineurin-like phosphoesterase
BMDPJNLG_00158	9.67e-104	-	-	-	-	-	-	-	-
BMDPJNLG_00159	5.62e-95	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
BMDPJNLG_00160	2.91e-186	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
BMDPJNLG_00161	8.12e-144	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BMDPJNLG_00162	8.22e-38	-	-	-	-	-	-	-	-
BMDPJNLG_00164	6.31e-84	-	-	-	-	-	-	-	-
BMDPJNLG_00165	6.84e-70	-	-	-	-	-	-	-	-
BMDPJNLG_00167	2.97e-163	-	-	-	S	-	-	-	PAS domain
BMDPJNLG_00168	1.29e-115	-	-	-	EGP	-	-	-	Major Facilitator
BMDPJNLG_00169	3.73e-300	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
BMDPJNLG_00170	7.14e-91	-	-	-	EGP	-	-	-	Major Facilitator
BMDPJNLG_00171	6.29e-38	-	-	-	-	-	-	-	-
BMDPJNLG_00173	1.61e-48	-	-	-	S	-	-	-	Cytochrome B5
BMDPJNLG_00174	3.22e-214	arbZ	-	-	I	-	-	-	Phosphate acyltransferases
BMDPJNLG_00175	3.04e-232	-	-	-	M	-	-	-	Glycosyl transferase family 8
BMDPJNLG_00176	2.04e-183	-	-	-	M	-	-	-	Glycosyl transferase family 8
BMDPJNLG_00177	1.44e-184	arbx	-	-	M	-	-	-	Glycosyl transferase family 8
BMDPJNLG_00178	1.46e-192	-	-	-	I	-	-	-	Acyl-transferase
BMDPJNLG_00180	1.09e-46	-	-	-	-	-	-	-	-
BMDPJNLG_00182	4.65e-168	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
BMDPJNLG_00183	2.62e-199	epsV	-	-	S	-	-	-	glycosyl transferase family 2
BMDPJNLG_00184	4.69e-158	-	-	-	S	-	-	-	Alpha/beta hydrolase family
BMDPJNLG_00185	5.02e-190	-	-	-	K	-	-	-	Helix-turn-helix domain
BMDPJNLG_00187	7.33e-19	-	-	-	-	-	-	-	-
BMDPJNLG_00188	1.19e-31	-	-	-	L	ko:K07473	-	ko00000,ko02048	Addiction module antitoxin, RelB DinJ family
BMDPJNLG_00189	1.86e-56	-	-	-	E	-	-	-	Pfam:DUF955
BMDPJNLG_00191	1.91e-243	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
BMDPJNLG_00192	9.14e-317	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BMDPJNLG_00193	4.77e-294	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
BMDPJNLG_00194	2.2e-308	srrA1	-	-	G	ko:K02027,ko:K17244	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
BMDPJNLG_00195	1.04e-208	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
BMDPJNLG_00196	7.3e-216	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BMDPJNLG_00197	6.36e-162	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
BMDPJNLG_00198	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
BMDPJNLG_00199	1.01e-222	rihC	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
BMDPJNLG_00200	6.63e-174	gntR	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
BMDPJNLG_00201	7.49e-197	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
BMDPJNLG_00202	2.9e-79	-	-	-	S	-	-	-	Enterocin A Immunity
BMDPJNLG_00203	4.44e-174	-	-	-	K	ko:K22103	-	ko00000,ko03000	DeoR C terminal sensor domain
BMDPJNLG_00204	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
BMDPJNLG_00205	1.85e-205	-	-	-	S	-	-	-	Phospholipase, patatin family
BMDPJNLG_00206	1.75e-187	-	-	-	S	-	-	-	hydrolase
BMDPJNLG_00207	0.0	glvC	2.7.1.208	-	G	ko:K02749,ko:K02750	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
BMDPJNLG_00208	6.89e-190	glvR	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
BMDPJNLG_00209	1.52e-103	-	-	-	-	-	-	-	-
BMDPJNLG_00210	1.96e-113	ptbA	2.7.1.208	-	G	ko:K02755,ko:K02777,ko:K20107,ko:K20108	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
BMDPJNLG_00211	1.76e-52	-	-	-	-	-	-	-	-
BMDPJNLG_00212	2.14e-154	-	-	-	C	-	-	-	nitroreductase
BMDPJNLG_00213	0.0	yhdP	-	-	S	-	-	-	Transporter associated domain
BMDPJNLG_00214	8.59e-133	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
BMDPJNLG_00215	9.14e-163	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
BMDPJNLG_00216	7.91e-232	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
BMDPJNLG_00217	7.06e-114	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
BMDPJNLG_00218	5.83e-67	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
BMDPJNLG_00219	0.0	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
BMDPJNLG_00220	1.29e-295	-	-	-	E	ko:K03294	-	ko00000	amino acid
BMDPJNLG_00221	2.13e-167	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
BMDPJNLG_00222	5.96e-283	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
BMDPJNLG_00223	1.97e-315	chbC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BMDPJNLG_00225	4.65e-278	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
BMDPJNLG_00226	8e-68	-	-	-	L	-	-	-	Transposase DDE domain
BMDPJNLG_00227	9.82e-80	-	-	-	F	-	-	-	NUDIX domain
BMDPJNLG_00228	1.83e-103	-	-	-	S	-	-	-	AAA domain
BMDPJNLG_00229	1.5e-150	-	-	-	S	-	-	-	F420-0:Gamma-glutamyl ligase
BMDPJNLG_00230	3.06e-85	yxaM	-	-	EGP	-	-	-	Major facilitator Superfamily
BMDPJNLG_00231	3.24e-112	yxaM	-	-	EGP	-	-	-	Major facilitator Superfamily
BMDPJNLG_00233	7.01e-32	-	-	-	K	-	-	-	Transcriptional regulator
BMDPJNLG_00234	0.0	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
BMDPJNLG_00235	0.0	-	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
BMDPJNLG_00236	4.97e-64	-	-	-	S	-	-	-	Metal binding domain of Ada
BMDPJNLG_00237	2.77e-248	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BMDPJNLG_00238	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
BMDPJNLG_00239	1.44e-234	-	-	-	L	-	-	-	Phage integrase family
BMDPJNLG_00240	3.94e-85	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
BMDPJNLG_00241	3.22e-103	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BMDPJNLG_00242	1.06e-185	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
BMDPJNLG_00243	5.12e-174	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BMDPJNLG_00244	5.5e-202	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BMDPJNLG_00245	1.02e-198	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BMDPJNLG_00246	2.23e-80	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
BMDPJNLG_00247	3.62e-218	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BMDPJNLG_00248	3.82e-82	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BMDPJNLG_00249	3.44e-72	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BMDPJNLG_00250	1.89e-21	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
BMDPJNLG_00251	3.13e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BMDPJNLG_00252	3.7e-155	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
BMDPJNLG_00253	1.25e-301	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
BMDPJNLG_00254	4.95e-93	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
BMDPJNLG_00255	2.22e-34	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
BMDPJNLG_00256	3.73e-110	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
BMDPJNLG_00257	2.8e-72	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
BMDPJNLG_00258	7.18e-121	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BMDPJNLG_00259	7.94e-90	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
BMDPJNLG_00260	1e-39	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BMDPJNLG_00261	1.23e-123	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
BMDPJNLG_00262	3.03e-44	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
BMDPJNLG_00263	3.62e-79	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
BMDPJNLG_00264	1.56e-55	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
BMDPJNLG_00265	1.45e-34	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
BMDPJNLG_00266	1.66e-100	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BMDPJNLG_00267	8.7e-157	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
BMDPJNLG_00268	9.07e-73	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
BMDPJNLG_00269	1.14e-62	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BMDPJNLG_00270	4.01e-198	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
BMDPJNLG_00271	1.14e-63	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
BMDPJNLG_00272	4.68e-138	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
BMDPJNLG_00273	6.64e-146	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
BMDPJNLG_00274	6.34e-66	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
BMDPJNLG_00275	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BMDPJNLG_00276	1.39e-106	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
BMDPJNLG_00277	1.47e-91	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
BMDPJNLG_00278	7.71e-157	comC	3.4.23.43	-	NOU	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	Bacterial Peptidase A24 N-terminal domain
BMDPJNLG_00279	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BMDPJNLG_00280	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BMDPJNLG_00281	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
BMDPJNLG_00282	1.92e-106	ytsP	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
BMDPJNLG_00286	1.69e-49	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
BMDPJNLG_00287	1.45e-133	-	-	-	-	-	-	-	-
BMDPJNLG_00289	3.46e-16	-	-	-	M	-	-	-	Rib/alpha-like repeat
BMDPJNLG_00290	1.05e-176	-	-	-	F	-	-	-	Phosphorylase superfamily
BMDPJNLG_00291	6.64e-185	-	-	-	F	-	-	-	Phosphorylase superfamily
BMDPJNLG_00292	2.16e-193	-	2.3.1.81	-	V	ko:K00662	-	ko00000,ko01000,ko01504	Aminoglycoside 3-N-acetyltransferase
BMDPJNLG_00293	1.76e-38	-	-	-	-	-	-	-	-
BMDPJNLG_00294	6.31e-27	-	-	-	-	-	-	-	-
BMDPJNLG_00297	2.12e-27	-	-	-	S	-	-	-	Phage uncharacterised protein (Phage_XkdX)
BMDPJNLG_00298	6.36e-38	-	-	-	-	-	-	-	-
BMDPJNLG_00299	9.56e-33	sagD	-	-	S	-	-	-	YcaO cyclodehydratase, ATP-ad Mg2+-binding
BMDPJNLG_00300	3.98e-97	-	-	-	M	-	-	-	LysM domain
BMDPJNLG_00301	3.3e-42	-	-	-	-	-	-	-	-
BMDPJNLG_00304	3.7e-258	XK27_00915	-	-	C	-	-	-	Luciferase-like monooxygenase
BMDPJNLG_00305	7.94e-114	-	-	-	K	-	-	-	GNAT family
BMDPJNLG_00306	1.46e-161	-	-	-	S	-	-	-	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
BMDPJNLG_00308	6.04e-49	-	-	-	-	-	-	-	-
BMDPJNLG_00309	0.0	-	-	-	P	ko:K06148	-	ko00000,ko02000	ABC transporter
BMDPJNLG_00310	8.44e-306	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
BMDPJNLG_00311	0.0	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
BMDPJNLG_00312	3.53e-228	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
BMDPJNLG_00313	5.55e-119	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BMDPJNLG_00314	0.0	aha1	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
BMDPJNLG_00315	1.33e-225	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
BMDPJNLG_00316	4.37e-205	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
BMDPJNLG_00317	1.92e-241	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BMDPJNLG_00318	2.34e-122	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
BMDPJNLG_00319	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
BMDPJNLG_00320	0.0	frdA	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
BMDPJNLG_00321	1.66e-217	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
BMDPJNLG_00322	0.0	pepC4	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
BMDPJNLG_00323	5.26e-171	-	-	-	H	-	-	-	Aldolase/RraA
BMDPJNLG_00324	0.0	citP	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
BMDPJNLG_00325	2.43e-196	-	-	-	I	-	-	-	Alpha/beta hydrolase family
BMDPJNLG_00326	6.29e-250	citC	6.2.1.22	-	H	ko:K01910	ko02020,map02020	ko00000,ko00001,ko01000	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
BMDPJNLG_00327	1.6e-59	citD	-	-	C	ko:K01646	ko02020,map02020	ko00000,ko00001	Covalent carrier of the coenzyme of citrate lyase
BMDPJNLG_00328	3.46e-212	citE	4.1.3.34	-	G	ko:K01644	ko02020,map02020	ko00000,ko00001,ko01000	Belongs to the HpcH HpaI aldolase family
BMDPJNLG_00329	0.0	citF	2.8.3.10	-	H	ko:K01643	ko02020,map02020	ko00000,ko00001,ko01000	Citrate (pro-3S)-lyase alpha chain
BMDPJNLG_00330	7.19e-93	ytwI	-	-	S	-	-	-	Protein of unknown function (DUF441)
BMDPJNLG_00331	1.46e-31	-	-	-	-	-	-	-	-
BMDPJNLG_00332	3.51e-187	cbiQ	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt transport
BMDPJNLG_00333	0.0	ykoD	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
BMDPJNLG_00334	5.38e-125	-	-	-	S	ko:K16924	-	ko00000,ko00002,ko02000	UPF0397 protein
BMDPJNLG_00337	6.56e-86	sagB	-	-	C	-	-	-	Nitroreductase family
BMDPJNLG_00339	1.55e-72	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
BMDPJNLG_00340	4.83e-114	-	-	-	S	-	-	-	PFAM Archaeal ATPase
BMDPJNLG_00341	2.92e-115	-	-	-	S	-	-	-	PFAM Archaeal ATPase
BMDPJNLG_00342	7.02e-36	-	-	-	-	-	-	-	-
BMDPJNLG_00343	2.34e-105	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	UbiA prenyltransferase family
BMDPJNLG_00344	4.53e-209	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
BMDPJNLG_00345	3.09e-289	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
BMDPJNLG_00346	1.04e-211	-	-	-	S	-	-	-	Protein of unknown function (DUF2974)
BMDPJNLG_00347	8.58e-140	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
BMDPJNLG_00348	7.42e-123	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
BMDPJNLG_00349	1.5e-190	glnH	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
BMDPJNLG_00350	1.19e-174	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
BMDPJNLG_00351	6.42e-147	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Zeta toxin
BMDPJNLG_00352	5.15e-190	-	-	-	G	-	-	-	MFS/sugar transport protein
BMDPJNLG_00353	1.34e-106	-	-	-	G	-	-	-	MFS/sugar transport protein
BMDPJNLG_00354	7.3e-131	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
BMDPJNLG_00355	0.0	XK27_09605	-	-	V	ko:K18892	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter transmembrane region
BMDPJNLG_00356	0.0	XK27_09600	-	-	V	ko:K06147,ko:K18891	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
BMDPJNLG_00357	2.53e-106	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
BMDPJNLG_00358	2.05e-188	peb1A	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
BMDPJNLG_00359	6.43e-167	-	-	-	F	-	-	-	glutamine amidotransferase
BMDPJNLG_00360	5.64e-311	steT	-	-	E	ko:K03294	-	ko00000	amino acid
BMDPJNLG_00361	7.64e-307	steT	-	-	E	ko:K03294	-	ko00000	amino acid
BMDPJNLG_00362	6.41e-194	-	-	-	-	-	-	-	-
BMDPJNLG_00363	6.07e-223	ydhF	-	-	S	-	-	-	Aldo keto reductase
BMDPJNLG_00364	0.0	ykpA	-	-	S	-	-	-	ABC transporter, ATP-binding protein
BMDPJNLG_00365	5.1e-265	pepA	-	-	E	-	-	-	M42 glutamyl aminopeptidase
BMDPJNLG_00366	8.06e-56	-	-	-	-	-	-	-	-
BMDPJNLG_00367	2.2e-171	-	-	-	-	-	-	-	-
BMDPJNLG_00368	6.86e-276	pmrA	-	-	EGP	ko:K08161	-	ko00000,ko02000	MFS_1 like family
BMDPJNLG_00369	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
BMDPJNLG_00370	1.51e-117	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
BMDPJNLG_00371	1.66e-303	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
BMDPJNLG_00372	0.0	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative DNA-binding domain
BMDPJNLG_00373	1.05e-45	-	-	-	-	-	-	-	-
BMDPJNLG_00374	1.2e-199	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
BMDPJNLG_00375	6.13e-110	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
BMDPJNLG_00376	1.73e-79	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
BMDPJNLG_00377	1.45e-36	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
BMDPJNLG_00378	1.77e-298	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
BMDPJNLG_00380	1.49e-151	-	-	-	V	-	-	-	Abi-like protein
BMDPJNLG_00382	1.34e-175	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
BMDPJNLG_00383	1.3e-31	-	-	-	-	-	-	-	-
BMDPJNLG_00384	2.61e-195	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
BMDPJNLG_00385	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BMDPJNLG_00386	3.56e-186	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
BMDPJNLG_00387	5.23e-229	yvdE	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
BMDPJNLG_00388	1.28e-258	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BMDPJNLG_00389	4.65e-65	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
BMDPJNLG_00390	0.0	malA1	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain
BMDPJNLG_00391	0.0	nplT	3.2.1.133, 3.2.1.135, 3.2.1.54	GH13	G	ko:K01208	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
BMDPJNLG_00392	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
BMDPJNLG_00393	7.7e-149	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
BMDPJNLG_00394	2.85e-266	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
BMDPJNLG_00395	5.5e-282	-	-	-	G	ko:K15770	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
BMDPJNLG_00396	0.0	malF	-	-	P	ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
BMDPJNLG_00397	1.39e-197	malG	-	-	P	ko:K15772	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
BMDPJNLG_00398	1.45e-74	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
BMDPJNLG_00404	5.95e-114	ymdB	-	-	S	-	-	-	Macro domain protein
BMDPJNLG_00405	2.41e-127	mdtG2	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
BMDPJNLG_00406	1.05e-143	mdtG2	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
BMDPJNLG_00407	7.62e-223	-	-	-	-	-	-	-	-
BMDPJNLG_00408	2.2e-79	lysM	-	-	M	-	-	-	LysM domain
BMDPJNLG_00409	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
BMDPJNLG_00410	6.24e-210	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
BMDPJNLG_00411	1.41e-166	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
BMDPJNLG_00412	2.16e-220	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
BMDPJNLG_00413	5e-53	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
BMDPJNLG_00414	1.86e-50	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
BMDPJNLG_00415	0.0	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
BMDPJNLG_00416	2.48e-129	yjcK	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
BMDPJNLG_00417	1.31e-142	-	-	-	S	-	-	-	SNARE associated Golgi protein
BMDPJNLG_00418	2.52e-194	-	-	-	I	-	-	-	alpha/beta hydrolase fold
BMDPJNLG_00419	2.71e-200	plcR	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
BMDPJNLG_00420	2.73e-107	-	-	-	F	-	-	-	Nucleoside 2-deoxyribosyltransferase
BMDPJNLG_00421	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
BMDPJNLG_00422	9.76e-200	-	-	-	-	-	-	-	-
BMDPJNLG_00423	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
BMDPJNLG_00424	3.76e-128	yobS	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
BMDPJNLG_00425	7.69e-205	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
BMDPJNLG_00426	1.34e-205	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
BMDPJNLG_00427	3.51e-309	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
BMDPJNLG_00428	0.0	-	-	-	S	-	-	-	Zn-dependent metallo-hydrolase RNA specificity domain
BMDPJNLG_00429	5.62e-187	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
BMDPJNLG_00430	1.64e-202	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	ABC-type sugar transport systems, permease components
BMDPJNLG_00431	8.72e-258	malK	-	-	P	ko:K10112,ko:K17240	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
BMDPJNLG_00432	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
BMDPJNLG_00433	7.24e-204	endA	-	-	F	ko:K15051	-	ko00000	DNA RNA non-specific endonuclease
BMDPJNLG_00434	1.83e-230	-	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	EXOIII
BMDPJNLG_00435	5.96e-202	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BMDPJNLG_00436	2.23e-150	yviA	-	-	S	-	-	-	Protein of unknown function (DUF421)
BMDPJNLG_00437	2.94e-74	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
BMDPJNLG_00441	3.26e-23	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
BMDPJNLG_00442	2.65e-81	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
BMDPJNLG_00443	3.37e-192	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
BMDPJNLG_00444	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
BMDPJNLG_00445	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
BMDPJNLG_00446	0.0	pox1	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
BMDPJNLG_00447	2.42e-40	-	-	-	-	-	-	-	-
BMDPJNLG_00448	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BMDPJNLG_00449	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
BMDPJNLG_00450	1.21e-42	-	-	-	E	-	-	-	Zn peptidase
BMDPJNLG_00451	8.29e-76	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
BMDPJNLG_00452	4.75e-58	-	-	-	-	-	-	-	-
BMDPJNLG_00453	4.54e-135	-	-	-	S	-	-	-	Bacteriocin helveticin-J
BMDPJNLG_00454	2.66e-153	-	-	-	S	-	-	-	SLAP domain
BMDPJNLG_00455	6.57e-175	-	-	-	S	-	-	-	SLAP domain
BMDPJNLG_00456	3.91e-269	-	-	-	-	-	-	-	-
BMDPJNLG_00457	6.46e-27	-	-	-	-	-	-	-	-
BMDPJNLG_00458	1.83e-316	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
BMDPJNLG_00459	3.14e-137	-	-	-	-	-	-	-	-
BMDPJNLG_00460	6.63e-147	crp2	-	-	K	ko:K10914,ko:K21562	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	helix_turn_helix, cAMP Regulatory protein
BMDPJNLG_00461	0.0	copA	3.6.3.3, 3.6.3.5, 3.6.3.54	-	P	ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
BMDPJNLG_00462	3.27e-58	-	-	-	S	-	-	-	Cupredoxin-like domain
BMDPJNLG_00463	5.94e-75	-	-	-	S	-	-	-	Cupredoxin-like domain
BMDPJNLG_00464	3.15e-48	-	-	-	-	-	-	-	-
BMDPJNLG_00468	2.27e-179	-	-	-	-	-	-	-	-
BMDPJNLG_00469	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
BMDPJNLG_00470	7.23e-50	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
BMDPJNLG_00471	3.66e-46	rbtT	-	-	P	ko:K13021	-	ko00000,ko02000	Major Facilitator Superfamily
BMDPJNLG_00472	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
BMDPJNLG_00473	4.19e-92	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
BMDPJNLG_00474	1.05e-289	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
BMDPJNLG_00475	6.72e-261	pbpX	-	-	V	-	-	-	Beta-lactamase
BMDPJNLG_00476	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
BMDPJNLG_00477	2.17e-201	-	-	-	L	-	-	-	Helicase C-terminal domain protein
BMDPJNLG_00478	0.0	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
BMDPJNLG_00479	1.2e-202	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
BMDPJNLG_00481	1.44e-07	-	-	-	S	-	-	-	YSIRK type signal peptide
BMDPJNLG_00482	9.62e-247	ldhA	1.1.1.28	-	C	ko:K03778,ko:K18347	ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01504	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BMDPJNLG_00483	1.07e-179	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
BMDPJNLG_00484	3.16e-192	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	haloacid dehalogenase-like hydrolase
BMDPJNLG_00485	0.0	fusA1	-	-	J	-	-	-	elongation factor G
BMDPJNLG_00486	1.65e-205	yvgN	-	-	C	-	-	-	Aldo keto reductase
BMDPJNLG_00487	7.2e-202	-	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
BMDPJNLG_00488	7.75e-170	ysaA	3.1.3.5, 3.8.1.2	-	S	ko:K01560,ko:K07025,ko:K08723	ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
BMDPJNLG_00489	3.35e-223	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
BMDPJNLG_00490	4.76e-168	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
BMDPJNLG_00491	8.64e-176	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
BMDPJNLG_00492	1.59e-315	-	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
BMDPJNLG_00493	2.55e-26	-	-	-	-	-	-	-	-
BMDPJNLG_00494	3.93e-134	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
BMDPJNLG_00495	4.4e-226	ydbI	-	-	K	-	-	-	AI-2E family transporter
BMDPJNLG_00496	1.82e-135	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
BMDPJNLG_00497	5.14e-264	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
BMDPJNLG_00498	3.82e-149	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BMDPJNLG_00499	1.21e-44	-	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
BMDPJNLG_00500	0.0	ctrA	-	-	E	ko:K03294	-	ko00000	amino acid
BMDPJNLG_00501	5.56e-72	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
BMDPJNLG_00502	2.32e-290	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BMDPJNLG_00503	6.78e-60	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
BMDPJNLG_00504	2.08e-122	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
BMDPJNLG_00505	1.63e-173	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
BMDPJNLG_00506	1.64e-74	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
BMDPJNLG_00507	1.66e-268	-	-	-	S	-	-	-	SLAP domain
BMDPJNLG_00508	3.84e-153	ung2	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil-DNA glycosylase
BMDPJNLG_00509	6.01e-147	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
BMDPJNLG_00510	3.45e-144	-	-	-	L	-	-	-	Resolvase, N-terminal
BMDPJNLG_00511	8.59e-258	-	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
BMDPJNLG_00513	9.86e-146	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BMDPJNLG_00514	4.16e-51	ynzC	-	-	S	-	-	-	UPF0291 protein
BMDPJNLG_00515	1.3e-40	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
BMDPJNLG_00516	0.0	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
BMDPJNLG_00517	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
BMDPJNLG_00518	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
BMDPJNLG_00519	2.01e-291	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
BMDPJNLG_00520	1.65e-151	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
BMDPJNLG_00521	2.03e-251	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
BMDPJNLG_00522	2.21e-180	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
BMDPJNLG_00523	1.76e-235	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
BMDPJNLG_00524	5.86e-168	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
BMDPJNLG_00525	1.22e-121	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
BMDPJNLG_00526	6.38e-178	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BMDPJNLG_00527	3.93e-181	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
BMDPJNLG_00528	6.38e-254	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
BMDPJNLG_00529	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
BMDPJNLG_00530	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BMDPJNLG_00531	3.4e-108	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
BMDPJNLG_00532	1.19e-259	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
BMDPJNLG_00533	3.75e-63	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
BMDPJNLG_00534	1.61e-64	ylxQ	-	-	J	-	-	-	ribosomal protein
BMDPJNLG_00535	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
BMDPJNLG_00536	1.67e-79	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
BMDPJNLG_00537	1.35e-197	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BMDPJNLG_00538	5.35e-223	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
BMDPJNLG_00539	2.56e-248	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
BMDPJNLG_00540	3.74e-109	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BMDPJNLG_00541	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
BMDPJNLG_00542	5.88e-278	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
BMDPJNLG_00543	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
BMDPJNLG_00544	1.09e-226	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
BMDPJNLG_00550	7e-19	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
BMDPJNLG_00551	1.21e-16	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
BMDPJNLG_00552	1.71e-102	-	-	-	S	-	-	-	DNA binding
BMDPJNLG_00557	8.72e-07	-	-	-	-	-	-	-	-
BMDPJNLG_00558	4.52e-95	-	-	-	K	ko:K07741	-	ko00000	Phage antirepressor protein
BMDPJNLG_00564	2.36e-08	-	-	-	K	-	-	-	DNA-binding protein
BMDPJNLG_00568	1.11e-70	-	-	-	S	-	-	-	Protein of unknown function (DUF1071)
BMDPJNLG_00569	3.2e-41	-	-	-	S	-	-	-	Conserved phage C-terminus (Phg_2220_C)
BMDPJNLG_00570	4.6e-64	-	-	-	L	ko:K02315	-	ko00000,ko03032	IstB-like ATP binding protein
BMDPJNLG_00576	5.99e-52	-	-	-	L	-	-	-	Endodeoxyribonuclease RusA
BMDPJNLG_00577	1.08e-10	-	-	-	-	-	-	-	-
BMDPJNLG_00586	8.27e-46	-	-	-	S	-	-	-	HicB_like antitoxin of bacterial toxin-antitoxin system
BMDPJNLG_00587	7.69e-16	-	-	-	N	-	-	-	HicA toxin of bacterial toxin-antitoxin,
BMDPJNLG_00588	6.3e-48	-	-	-	L	ko:K07474	-	ko00000	Terminase small subunit
BMDPJNLG_00589	1.22e-24	-	-	-	S	-	-	-	Terminase-like family
BMDPJNLG_00590	6.33e-235	-	-	-	S	-	-	-	Terminase-like family
BMDPJNLG_00591	3.24e-178	-	-	-	S	ko:K09961	-	ko00000	Protein of unknown function (DUF1073)
BMDPJNLG_00592	5.89e-127	-	-	-	S	-	-	-	Phage Mu protein F like protein
BMDPJNLG_00593	1.14e-16	-	-	-	S	-	-	-	Lysin motif
BMDPJNLG_00594	2.77e-137	-	-	-	S	ko:K09960	-	ko00000	Uncharacterized protein conserved in bacteria (DUF2213)
BMDPJNLG_00595	5.09e-76	-	-	-	-	-	-	-	-
BMDPJNLG_00596	1.83e-181	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2184)
BMDPJNLG_00598	1.26e-88	-	-	-	-	-	-	-	-
BMDPJNLG_00599	1.8e-59	-	-	-	-	-	-	-	-
BMDPJNLG_00600	7.95e-69	-	-	-	-	-	-	-	-
BMDPJNLG_00601	1.75e-190	-	-	-	S	-	-	-	Protein of unknown function (DUF3383)
BMDPJNLG_00602	1.1e-72	-	-	-	-	-	-	-	-
BMDPJNLG_00605	0.0	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
BMDPJNLG_00606	1.19e-68	-	-	-	M	-	-	-	LysM domain
BMDPJNLG_00607	6.91e-61	-	-	-	-	-	-	-	-
BMDPJNLG_00608	1.57e-128	-	-	-	-	-	-	-	-
BMDPJNLG_00609	1.15e-64	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
BMDPJNLG_00610	3.03e-300	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
BMDPJNLG_00613	4.39e-268	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
BMDPJNLG_00615	5.01e-55	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
BMDPJNLG_00616	2.14e-234	scrR	-	-	K	ko:K03484	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
BMDPJNLG_00617	0.0	scrB	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
BMDPJNLG_00618	0.0	scrA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
BMDPJNLG_00619	2.14e-231	-	-	-	M	-	-	-	CHAP domain
BMDPJNLG_00620	2.79e-102	-	-	-	-	-	-	-	-
BMDPJNLG_00621	1.06e-58	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BMDPJNLG_00622	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
BMDPJNLG_00623	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
BMDPJNLG_00624	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
BMDPJNLG_00625	3.89e-132	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
BMDPJNLG_00626	1.39e-237	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
BMDPJNLG_00627	7.58e-69	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
BMDPJNLG_00628	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BMDPJNLG_00629	4.29e-275	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BMDPJNLG_00630	3.16e-231	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
BMDPJNLG_00631	1.32e-305	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
BMDPJNLG_00632	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BMDPJNLG_00633	5.32e-57	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
BMDPJNLG_00634	9.37e-96	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
BMDPJNLG_00635	1.18e-66	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
BMDPJNLG_00636	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
BMDPJNLG_00637	5.37e-72	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
BMDPJNLG_00638	2.34e-76	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
BMDPJNLG_00639	2.15e-63	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
BMDPJNLG_00640	2.55e-65	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
BMDPJNLG_00641	1.42e-184	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
BMDPJNLG_00642	1.17e-209	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
BMDPJNLG_00643	5.7e-208	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
BMDPJNLG_00644	1.6e-215	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
BMDPJNLG_00645	8.62e-273	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
BMDPJNLG_00646	3.65e-273	mvaA	1.1.1.88, 2.3.1.9	-	C	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the HMG-CoA reductase family
BMDPJNLG_00647	7.15e-277	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
BMDPJNLG_00648	2.6e-59	-	-	-	-	-	-	-	-
BMDPJNLG_00649	1.52e-34	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
BMDPJNLG_00650	1.17e-151	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
BMDPJNLG_00651	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BMDPJNLG_00652	3.39e-186	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
BMDPJNLG_00653	1.43e-110	-	-	-	-	-	-	-	-
BMDPJNLG_00654	3.85e-98	-	-	-	-	-	-	-	-
BMDPJNLG_00655	1.51e-182	hlyX	-	-	S	ko:K03699	-	ko00000,ko02042	Transporter associated domain
BMDPJNLG_00656	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
BMDPJNLG_00657	8.42e-60	XK27_09445	-	-	S	-	-	-	Domain of unknown function (DUF1827)
BMDPJNLG_00658	0.0	clpE	-	-	O	ko:K03697	-	ko00000,ko03110	Belongs to the ClpA ClpB family
BMDPJNLG_00659	1.29e-54	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
BMDPJNLG_00660	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BMDPJNLG_00661	6.28e-87	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
BMDPJNLG_00662	1.5e-178	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
BMDPJNLG_00663	7.37e-158	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
BMDPJNLG_00664	3.83e-17	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
BMDPJNLG_00665	5.74e-148	yjbH	-	-	Q	-	-	-	Thioredoxin
BMDPJNLG_00666	1.71e-143	-	-	-	S	-	-	-	CYTH
BMDPJNLG_00667	1.7e-147	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
BMDPJNLG_00668	1.91e-195	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BMDPJNLG_00669	7.96e-221	rluD2	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
BMDPJNLG_00670	0.0	mycA	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
BMDPJNLG_00671	3.77e-122	-	-	-	S	-	-	-	SNARE associated Golgi protein
BMDPJNLG_00672	1.36e-45	-	-	-	-	-	-	-	-
BMDPJNLG_00673	1.04e-31	-	-	-	-	-	-	-	-
BMDPJNLG_00674	6.48e-167	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
BMDPJNLG_00675	3.15e-33	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
BMDPJNLG_00676	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
BMDPJNLG_00677	1.28e-09	-	-	-	S	-	-	-	PFAM HicB family
BMDPJNLG_00678	1.44e-161	-	-	-	S	-	-	-	interspecies interaction between organisms
BMDPJNLG_00679	6.78e-47	-	-	-	-	-	-	-	-
BMDPJNLG_00683	8.51e-205	-	-	-	-	-	-	-	-
BMDPJNLG_00684	2.37e-219	-	-	-	-	-	-	-	-
BMDPJNLG_00685	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
BMDPJNLG_00686	5.88e-286	ynbB	-	-	P	-	-	-	aluminum resistance
BMDPJNLG_00687	3.84e-216	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BMDPJNLG_00688	4.95e-89	yqhL	-	-	P	-	-	-	Rhodanese-like protein
BMDPJNLG_00689	4.1e-47	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
BMDPJNLG_00690	3.25e-154	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Rhomboid family
BMDPJNLG_00691	7.92e-126	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BMDPJNLG_00692	6.25e-29	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
BMDPJNLG_00693	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
BMDPJNLG_00694	0.0	-	-	-	S	-	-	-	membrane
BMDPJNLG_00695	7.04e-218	-	-	-	G	-	-	-	BadF/BadG/BcrA/BcrD ATPase family
BMDPJNLG_00696	9.43e-52	-	-	-	S	ko:K07473	-	ko00000,ko02048	RelB antitoxin
BMDPJNLG_00697	2.74e-69	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	Bacterial toxin of type II toxin-antitoxin system, YafQ
BMDPJNLG_00698	2.22e-60	hupB2	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
BMDPJNLG_00699	4.28e-178	-	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	abc transporter atp-binding protein
BMDPJNLG_00700	1.55e-201	isdF	-	-	U	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BMDPJNLG_00701	2.07e-203	isdE	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
BMDPJNLG_00702	7.04e-159	-	-	-	M	ko:K14193	ko05150,map05150	ko00000,ko00001	Iron Transport-associated domain
BMDPJNLG_00704	6.09e-121	-	-	-	-	-	-	-	-
BMDPJNLG_00705	3.21e-175	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
BMDPJNLG_00706	7.7e-126	-	-	-	L	-	-	-	Helix-turn-helix domain
BMDPJNLG_00707	3.4e-169	-	-	-	EGP	-	-	-	Major Facilitator
BMDPJNLG_00708	1.66e-44	-	-	-	K	-	-	-	Transcriptional regulator
BMDPJNLG_00709	8.88e-178	-	-	-	P	-	-	-	Voltage gated chloride channel
BMDPJNLG_00710	3.44e-238	-	-	-	C	-	-	-	FMN-dependent dehydrogenase
BMDPJNLG_00711	8.68e-69	-	-	-	-	-	-	-	-
BMDPJNLG_00712	1.17e-56	-	-	-	-	-	-	-	-
BMDPJNLG_00713	1.33e-295	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BMDPJNLG_00714	0.0	-	-	-	E	-	-	-	amino acid
BMDPJNLG_00715	1.64e-200	yhaX	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
BMDPJNLG_00716	0.0	dexB	3.2.1.70	-	G	ko:K01215	-	ko00000,ko01000	Alpha amylase, catalytic domain protein
BMDPJNLG_00717	1.07e-52	rpmE	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
BMDPJNLG_00718	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
BMDPJNLG_00719	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
BMDPJNLG_00720	9.39e-80	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
BMDPJNLG_00721	1.62e-276	alr	5.1.1.1, 5.1.1.5	-	E	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BMDPJNLG_00722	1.23e-166	-	-	-	S	-	-	-	(CBS) domain
BMDPJNLG_00723	2.93e-234	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
BMDPJNLG_00724	1.89e-134	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
BMDPJNLG_00725	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BMDPJNLG_00726	7.32e-46	yabO	-	-	J	-	-	-	S4 domain protein
BMDPJNLG_00727	7.52e-78	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
BMDPJNLG_00728	1.61e-81	-	-	-	J	ko:K07571	-	ko00000	S1 RNA binding domain
BMDPJNLG_00729	3.35e-308	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
BMDPJNLG_00730	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BMDPJNLG_00731	3.91e-214	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
BMDPJNLG_00732	2.28e-122	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
BMDPJNLG_00733	4.45e-84	-	-	-	K	-	-	-	transcriptional regulator
BMDPJNLG_00734	4.83e-144	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
BMDPJNLG_00735	9.13e-157	-	-	-	L	-	-	-	PFAM transposase IS116 IS110 IS902
BMDPJNLG_00736	0.0	XK27_08315	-	-	M	-	-	-	Sulfatase
BMDPJNLG_00737	1.03e-145	plsY1	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
BMDPJNLG_00738	6.88e-257	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
BMDPJNLG_00739	5.18e-128	-	-	-	G	-	-	-	Aldose 1-epimerase
BMDPJNLG_00740	4.51e-171	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BMDPJNLG_00741	1.72e-149	-	-	-	-	-	-	-	-
BMDPJNLG_00742	3.27e-167	-	-	-	-	-	-	-	-
BMDPJNLG_00743	9.7e-207	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
BMDPJNLG_00744	1.22e-138	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
BMDPJNLG_00745	7.07e-141	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
BMDPJNLG_00746	1.64e-222	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
BMDPJNLG_00747	7.32e-232	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
BMDPJNLG_00748	2.09e-286	-	-	-	NU	-	-	-	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
BMDPJNLG_00750	7.39e-165	-	-	-	S	-	-	-	SLAP domain
BMDPJNLG_00752	2.85e-54	-	-	-	-	-	-	-	-
BMDPJNLG_00753	3.6e-101	-	-	-	K	-	-	-	DNA-templated transcription, initiation
BMDPJNLG_00755	1.08e-186	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
BMDPJNLG_00756	5.58e-143	-	-	-	S	-	-	-	SLAP domain
BMDPJNLG_00757	3.39e-07	-	-	-	S	-	-	-	Protein of unknown function (DUF2922)
BMDPJNLG_00758	1.21e-40	-	-	-	-	-	-	-	-
BMDPJNLG_00759	0.0	pulA	3.2.1.41	CBM48,GH13	G	ko:K01200	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko01000	belongs to the glycosyl hydrolase 13 family
BMDPJNLG_00760	2.51e-52	-	-	-	K	ko:K03484	-	ko00000,ko03000	Periplasmic binding protein domain
BMDPJNLG_00761	7.63e-43	-	-	-	K	ko:K03484	-	ko00000,ko03000	Periplasmic binding protein domain
BMDPJNLG_00762	1.29e-155	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
BMDPJNLG_00763	3.73e-55	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
BMDPJNLG_00764	5.32e-42	-	-	-	-	ko:K18829	-	ko00000,ko02048	-
BMDPJNLG_00765	1.64e-90	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	Toxin-antitoxin system, toxin component, MazF family
BMDPJNLG_00766	9e-132	-	-	-	L	-	-	-	Integrase
BMDPJNLG_00767	6.53e-194	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
BMDPJNLG_00768	3.87e-73	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
BMDPJNLG_00769	5.1e-139	-	-	-	L	-	-	-	PFAM Integrase catalytic
BMDPJNLG_00770	6.08e-148	eriC	-	-	P	ko:K03281	-	ko00000	chloride
BMDPJNLG_00771	6.55e-76	eriC	-	-	P	ko:K03281	-	ko00000	chloride
BMDPJNLG_00772	1.45e-34	-	-	-	K	-	-	-	FCD
BMDPJNLG_00773	1.43e-19	-	-	-	K	-	-	-	FCD
BMDPJNLG_00774	4.37e-132	-	-	-	GM	-	-	-	NmrA-like family
BMDPJNLG_00775	5.5e-154	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BMDPJNLG_00776	6.35e-164	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
BMDPJNLG_00777	1.52e-212	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
BMDPJNLG_00778	1.01e-122	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
BMDPJNLG_00779	2.13e-229	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
BMDPJNLG_00780	2.04e-313	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
BMDPJNLG_00781	3.47e-268	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
BMDPJNLG_00782	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
BMDPJNLG_00783	6.69e-115	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
BMDPJNLG_00785	8.25e-16	-	-	-	S	-	-	-	Protein conserved in bacteria
BMDPJNLG_00786	4.26e-27	-	-	-	E	-	-	-	Pfam:DUF955
BMDPJNLG_00787	0.0	-	-	-	L	-	-	-	Transposase DDE domain
BMDPJNLG_00788	1.79e-42	-	-	-	K	-	-	-	Bacterial regulatory helix-turn-helix protein, lysR family
BMDPJNLG_00790	2.99e-114	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
BMDPJNLG_00791	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
BMDPJNLG_00792	0.0	yycH	-	-	S	-	-	-	YycH protein
BMDPJNLG_00793	7.44e-192	yycI	-	-	S	-	-	-	YycH protein
BMDPJNLG_00794	9.78e-188	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
BMDPJNLG_00795	2.87e-227	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
BMDPJNLG_00796	8.64e-107	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
BMDPJNLG_00797	1.68e-44	-	-	-	G	-	-	-	Peptidase_C39 like family
BMDPJNLG_00798	9.23e-209	-	-	-	M	-	-	-	NlpC/P60 family
BMDPJNLG_00799	1.16e-115	-	-	-	G	-	-	-	Peptidase_C39 like family
BMDPJNLG_00800	1.09e-223	pepI	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
BMDPJNLG_00801	2.05e-115	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
BMDPJNLG_00802	0.0	-	-	-	S	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
BMDPJNLG_00803	1.05e-222	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
BMDPJNLG_00804	9.49e-207	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
BMDPJNLG_00805	6.78e-124	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
BMDPJNLG_00806	1.99e-205	ysdE	-	-	P	-	-	-	Citrate transporter
BMDPJNLG_00807	4.43e-25	ysdE	-	-	P	-	-	-	Citrate transporter
BMDPJNLG_00808	1.94e-91	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
BMDPJNLG_00809	5.88e-275	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
BMDPJNLG_00810	1.42e-102	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
BMDPJNLG_00811	9.69e-25	-	-	-	-	-	-	-	-
BMDPJNLG_00812	1.34e-09	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
BMDPJNLG_00813	1.66e-239	-	-	-	M	-	-	-	Glycosyl transferase
BMDPJNLG_00814	1.43e-222	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
BMDPJNLG_00815	2.61e-153	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
BMDPJNLG_00816	3.15e-212	-	-	-	L	-	-	-	HNH nucleases
BMDPJNLG_00817	2.15e-127	-	-	-	L	-	-	-	Helix-turn-helix domain
BMDPJNLG_00818	2.13e-171	tagA	2.4.1.187	GT26	F	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
BMDPJNLG_00819	2.94e-261	-	-	-	M	-	-	-	Glycosyl transferases group 1
BMDPJNLG_00820	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BMDPJNLG_00821	1.91e-195	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
BMDPJNLG_00822	2.7e-258	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
BMDPJNLG_00823	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
BMDPJNLG_00824	9.16e-287	-	-	-	M	-	-	-	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
BMDPJNLG_00825	0.0	epsU	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
BMDPJNLG_00826	5.48e-173	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
BMDPJNLG_00827	1.3e-109	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
BMDPJNLG_00829	3.29e-127	acmA	3.2.1.17, 3.2.1.96	-	NU	ko:K01185,ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	mannosyl-glycoprotein
BMDPJNLG_00830	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
BMDPJNLG_00831	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
BMDPJNLG_00832	6.25e-268	camS	-	-	S	-	-	-	sex pheromone
BMDPJNLG_00833	5.42e-67	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BMDPJNLG_00834	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
BMDPJNLG_00835	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BMDPJNLG_00836	3.93e-219	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
BMDPJNLG_00837	1.33e-44	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
BMDPJNLG_00839	1.29e-41	-	-	-	O	-	-	-	OsmC-like protein
BMDPJNLG_00840	5.22e-131	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
BMDPJNLG_00841	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BMDPJNLG_00842	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BMDPJNLG_00843	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
BMDPJNLG_00844	4.95e-98	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
BMDPJNLG_00845	1.56e-177	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BMDPJNLG_00846	3.81e-123	comX	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	Belongs to the sigma-70 factor family
BMDPJNLG_00847	1.19e-45	-	-	-	-	-	-	-	-
BMDPJNLG_00848	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
BMDPJNLG_00849	1.52e-87	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
BMDPJNLG_00850	1.34e-310	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
BMDPJNLG_00851	3.73e-33	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
BMDPJNLG_00852	1.23e-130	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
BMDPJNLG_00853	3.82e-90	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
BMDPJNLG_00854	1.05e-160	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
BMDPJNLG_00855	5.48e-201	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
BMDPJNLG_00856	2.29e-210	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
BMDPJNLG_00857	3.01e-197	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
BMDPJNLG_00858	5.24e-187	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
BMDPJNLG_00859	3.83e-178	pstB1	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
BMDPJNLG_00860	1.37e-149	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
BMDPJNLG_00861	5.61e-118	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
BMDPJNLG_00863	3.72e-111	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BMDPJNLG_00864	1.61e-72	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
BMDPJNLG_00865	2.67e-188	-	2.1.1.172	-	J	ko:K00564,ko:K10716	-	ko00000,ko01000,ko02000,ko03009	Ion channel
BMDPJNLG_00866	5.31e-149	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
BMDPJNLG_00867	6.15e-36	-	-	-	-	-	-	-	-
BMDPJNLG_00868	7.05e-103	-	-	-	L	-	-	-	COG3385 FOG Transposase and inactivated derivatives
BMDPJNLG_00869	3.74e-125	-	-	-	-	-	-	-	-
BMDPJNLG_00870	1.94e-96	-	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	UbiA prenyltransferase family
BMDPJNLG_00871	1.82e-05	-	-	-	-	-	-	-	-
BMDPJNLG_00872	1.38e-225	-	-	-	M	-	-	-	Rib/alpha-like repeat
BMDPJNLG_00873	4.06e-147	-	-	-	M	-	-	-	Rib/alpha-like repeat
BMDPJNLG_00874	1.89e-129	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
BMDPJNLG_00876	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
BMDPJNLG_00877	1.1e-54	-	-	-	K	-	-	-	Helix-turn-helix
BMDPJNLG_00878	9.63e-136	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
BMDPJNLG_00879	8.34e-294	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
BMDPJNLG_00880	2.07e-196	msmR	-	-	K	-	-	-	AraC-like ligand binding domain
BMDPJNLG_00881	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
BMDPJNLG_00882	7.28e-97	-	-	-	K	-	-	-	acetyltransferase
BMDPJNLG_00883	1.89e-312	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BMDPJNLG_00884	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
BMDPJNLG_00885	2.38e-88	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
BMDPJNLG_00886	1.75e-89	-	-	-	S	-	-	-	Domain of unknown function (DUF1934)
BMDPJNLG_00887	0.0	-	-	-	S	ko:K06885	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
BMDPJNLG_00888	2.53e-56	-	-	-	-	-	-	-	-
BMDPJNLG_00889	1.37e-219	-	-	-	GK	-	-	-	ROK family
BMDPJNLG_00892	3.68e-40	-	-	-	-	-	-	-	-
BMDPJNLG_00894	5.06e-141	-	-	-	S	-	-	-	Baseplate J-like protein
BMDPJNLG_00895	7.13e-41	-	-	-	-	-	-	-	-
BMDPJNLG_00896	9.53e-48	-	-	-	-	-	-	-	-
BMDPJNLG_00897	1.87e-127	-	-	-	-	-	-	-	-
BMDPJNLG_00898	9.82e-61	-	-	-	-	-	-	-	-
BMDPJNLG_00899	7.64e-54	-	-	-	M	-	-	-	LysM domain
BMDPJNLG_00900	3.88e-276	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
BMDPJNLG_00903	5.24e-38	-	-	-	-	-	-	-	-
BMDPJNLG_00904	4.55e-127	-	-	-	S	-	-	-	Protein of unknown function (DUF3383)
BMDPJNLG_00906	5.58e-34	-	-	-	-	-	-	-	-
BMDPJNLG_00907	2.42e-23	-	-	-	-	-	-	-	-
BMDPJNLG_00909	5.88e-118	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2184)
BMDPJNLG_00911	1.1e-83	-	-	-	S	ko:K09960	-	ko00000	Uncharacterized protein conserved in bacteria (DUF2213)
BMDPJNLG_00913	7.9e-55	-	-	-	S	-	-	-	Phage Mu protein F like protein
BMDPJNLG_00914	4.77e-165	-	-	-	S	ko:K09961	-	ko00000	Protein of unknown function (DUF1073)
BMDPJNLG_00915	9.67e-251	-	-	-	S	-	-	-	Terminase-like family
BMDPJNLG_00916	2.21e-13	-	-	-	L	ko:K07474	-	ko00000	Terminase small subunit
BMDPJNLG_00922	1.32e-273	XK27_11280	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
BMDPJNLG_00930	4.02e-140	-	-	-	L	-	-	-	Helix-turn-helix domain
BMDPJNLG_00931	5.44e-168	-	-	-	S	-	-	-	ERF superfamily
BMDPJNLG_00932	6.7e-163	-	-	-	S	-	-	-	Protein of unknown function (DUF1351)
BMDPJNLG_00933	1.07e-58	-	-	-	-	-	-	-	-
BMDPJNLG_00935	2.12e-24	-	-	-	-	-	-	-	-
BMDPJNLG_00936	4.49e-42	-	-	-	S	-	-	-	Helix-turn-helix domain
BMDPJNLG_00942	1.38e-121	-	-	-	S	-	-	-	DNA binding
BMDPJNLG_00943	2.18e-24	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
BMDPJNLG_00944	3.24e-24	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
BMDPJNLG_00946	7.72e-09	-	-	-	M	-	-	-	Host cell surface-exposed lipoprotein
BMDPJNLG_00948	2.22e-113	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
BMDPJNLG_00949	4.29e-54	-	-	-	U	ko:K03205	ko03070,map03070	ko00000,ko00001,ko00002,ko02044	TraM recognition site of TraD and TraG
BMDPJNLG_00954	6.48e-10	-	-	-	M	-	-	-	oxidoreductase activity
BMDPJNLG_00956	2.63e-25	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
BMDPJNLG_00962	2.59e-10	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
BMDPJNLG_00969	3.16e-34	-	-	-	S	-	-	-	Domain of unknown function (DUF771)
BMDPJNLG_00970	4.02e-17	-	-	-	-	-	-	-	-
BMDPJNLG_00972	2.13e-14	-	-	-	S	-	-	-	Arc-like DNA binding domain
BMDPJNLG_00974	2.14e-40	-	-	-	K	-	-	-	Helix-turn-helix domain
BMDPJNLG_00975	6.74e-30	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix domain
BMDPJNLG_00976	6.66e-31	-	-	-	K	-	-	-	Helix-turn-helix domain
BMDPJNLG_00978	3.73e-194	int3	-	-	L	-	-	-	Belongs to the 'phage' integrase family
BMDPJNLG_00980	1.07e-281	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BMDPJNLG_00981	9.87e-238	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
BMDPJNLG_00982	3.69e-30	-	-	-	-	-	-	-	-
BMDPJNLG_00983	1.94e-100	-	-	-	U	ko:K02248	-	ko00000,ko00002,ko02044	Putative Competence protein ComGF
BMDPJNLG_00984	1.68e-55	-	-	-	-	-	-	-	-
BMDPJNLG_00985	8.19e-91	-	-	-	-	ko:K02246	-	ko00000,ko00002,ko02044	-
BMDPJNLG_00986	7.88e-63	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	competence protein ComGC
BMDPJNLG_00987	1.72e-222	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
BMDPJNLG_00988	5.04e-231	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
BMDPJNLG_00989	5.65e-171	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
BMDPJNLG_00990	2.33e-120	-	-	-	S	-	-	-	VanZ like family
BMDPJNLG_00991	1.49e-130	ylbE	-	-	GM	-	-	-	NAD(P)H-binding
BMDPJNLG_00992	3.96e-37	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BMDPJNLG_00994	3.24e-290	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
BMDPJNLG_00995	1.16e-101	-	-	-	-	-	-	-	-
BMDPJNLG_00996	1.58e-143	-	-	-	S	-	-	-	Peptidase_C39 like family
BMDPJNLG_00997	7.36e-109	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
BMDPJNLG_00998	7.35e-174	-	-	-	S	-	-	-	Putative threonine/serine exporter
BMDPJNLG_00999	0.0	-	-	-	S	-	-	-	ABC transporter
BMDPJNLG_01000	2.52e-76	-	-	-	-	-	-	-	-
BMDPJNLG_01001	1.9e-126	rimL	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
BMDPJNLG_01002	6.04e-26	-	-	-	-	-	-	-	-
BMDPJNLG_01003	3.75e-79	-	-	-	-	-	-	-	-
BMDPJNLG_01004	1.39e-160	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
BMDPJNLG_01005	3.81e-275	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
BMDPJNLG_01006	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
BMDPJNLG_01007	8.61e-54	-	-	-	S	-	-	-	Enterocin A Immunity
BMDPJNLG_01008	1.71e-172	-	-	-	S	ko:K07052	-	ko00000	CAAX amino terminal protease
BMDPJNLG_01012	6.21e-60	-	-	-	V	ko:K20345	ko02024,map02024	ko00000,ko00001,ko02000	HlyD family secretion protein
BMDPJNLG_01013	0.0	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
BMDPJNLG_01014	1.64e-101	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
BMDPJNLG_01015	4.9e-99	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
BMDPJNLG_01016	2e-90	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
BMDPJNLG_01017	2.34e-107	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
BMDPJNLG_01019	3.98e-116	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
BMDPJNLG_01020	2.29e-274	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
BMDPJNLG_01022	1.32e-47	-	-	-	-	-	-	-	-
BMDPJNLG_01023	6.79e-190	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
BMDPJNLG_01024	1.91e-233	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
BMDPJNLG_01027	4.7e-163	pgm	-	-	G	-	-	-	Phosphoglycerate mutase family
BMDPJNLG_01028	2.7e-147	-	-	-	S	-	-	-	repeat protein
BMDPJNLG_01029	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
BMDPJNLG_01030	0.0	-	-	-	L	-	-	-	Nuclease-related domain
BMDPJNLG_01031	1.11e-234	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
BMDPJNLG_01032	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BMDPJNLG_01033	9e-46	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
BMDPJNLG_01034	9.73e-132	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
BMDPJNLG_01035	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
BMDPJNLG_01036	9.6e-269	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
BMDPJNLG_01037	9.94e-71	ylbG	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2129)
BMDPJNLG_01038	2.12e-125	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
BMDPJNLG_01039	2.88e-106	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BMDPJNLG_01040	1.16e-243	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
BMDPJNLG_01041	2.7e-126	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
BMDPJNLG_01042	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
BMDPJNLG_01043	2.57e-226	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
BMDPJNLG_01044	6.28e-47	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
BMDPJNLG_01045	7.11e-57	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BMDPJNLG_01046	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BMDPJNLG_01047	1.28e-168	-	-	-	L	-	-	-	PFAM transposase IS116 IS110 IS902
BMDPJNLG_01048	6.83e-133	yrgI	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Histidine phosphatase superfamily (branch 1)
BMDPJNLG_01049	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
BMDPJNLG_01050	0.0	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase
BMDPJNLG_01051	2.95e-283	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
BMDPJNLG_01052	3.06e-202	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
BMDPJNLG_01053	1.34e-151	-	-	-	-	-	-	-	-
BMDPJNLG_01054	2.83e-205	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BMDPJNLG_01056	2.48e-12	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BMDPJNLG_01057	4.87e-154	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
BMDPJNLG_01058	8.96e-231	-	-	-	V	-	-	-	Abi-like protein
BMDPJNLG_01061	1.25e-24	-	-	-	S	-	-	-	Hypothetical protein (DUF2513)
BMDPJNLG_01062	5.53e-95	-	-	-	K	-	-	-	Peptidase S24-like
BMDPJNLG_01063	2.86e-15	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
BMDPJNLG_01071	5.65e-23	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
BMDPJNLG_01074	9.66e-13	-	-	-	-	-	-	-	-
BMDPJNLG_01080	1.21e-106	-	-	-	K	ko:K07741	-	ko00000	AntA/AntB antirepressor
BMDPJNLG_01087	2.44e-285	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BMDPJNLG_01088	0.0	potE	-	-	E	-	-	-	Amino Acid
BMDPJNLG_01089	2.65e-107	-	-	-	S	-	-	-	Fic/DOC family
BMDPJNLG_01090	1.66e-227	-	-	-	-	-	-	-	-
BMDPJNLG_01091	1.65e-125	-	-	-	-	-	-	-	-
BMDPJNLG_01092	5.87e-110	-	-	-	-	-	-	-	-
BMDPJNLG_01093	1.92e-113	yhaH	-	-	S	-	-	-	Protein of unknown function (DUF805)
BMDPJNLG_01094	2.65e-89	-	-	-	O	-	-	-	OsmC-like protein
BMDPJNLG_01095	5.3e-264	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
BMDPJNLG_01096	3e-290	sptS	-	-	T	-	-	-	Histidine kinase
BMDPJNLG_01097	2.14e-85	dltr	-	-	K	-	-	-	response regulator
BMDPJNLG_01098	4.52e-35	dltr	-	-	K	-	-	-	response regulator
BMDPJNLG_01099	6.17e-140	-	-	-	T	-	-	-	Region found in RelA / SpoT proteins
BMDPJNLG_01100	0.0	gtfA	2.4.1.7	GH13	G	ko:K00690	ko00500,map00500	ko00000,ko00001,ko01000	Sucrose glucosyltransferase
BMDPJNLG_01101	0.0	melA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
BMDPJNLG_01102	1.72e-268	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
BMDPJNLG_01103	1.02e-195	-	-	-	P	ko:K10119	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
BMDPJNLG_01104	8.41e-202	msmF	-	-	P	ko:K10118	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
BMDPJNLG_01105	1.52e-300	msmE	-	-	G	ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
BMDPJNLG_01106	3.13e-206	-	-	-	K	ko:K03484	-	ko00000,ko03000	Periplasmic binding protein domain
BMDPJNLG_01107	2.14e-48	-	-	-	-	-	-	-	-
BMDPJNLG_01108	8.29e-254	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
BMDPJNLG_01111	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
BMDPJNLG_01112	1.62e-277	yqjV	-	-	EGP	-	-	-	Major Facilitator Superfamily
BMDPJNLG_01113	2.19e-292	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
BMDPJNLG_01114	1.69e-132	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
BMDPJNLG_01115	1.35e-180	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BMDPJNLG_01116	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Ribonucleoside-triphosphate reductase
BMDPJNLG_01117	0.0	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
BMDPJNLG_01118	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
BMDPJNLG_01119	0.0	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
BMDPJNLG_01120	5.18e-109	-	-	-	-	-	-	-	-
BMDPJNLG_01121	6.82e-139	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
BMDPJNLG_01122	1.29e-190	-	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
BMDPJNLG_01123	2.72e-168	phnB	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
BMDPJNLG_01124	6.34e-180	phnC	3.6.3.28	-	P	ko:K02041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
BMDPJNLG_01125	1.78e-212	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphonate ABC transporter
BMDPJNLG_01127	4.76e-111	usp5	-	-	T	-	-	-	universal stress protein
BMDPJNLG_01128	1.24e-191	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
BMDPJNLG_01129	6.51e-114	-	2.7.1.200, 2.7.1.204	-	G	ko:K02773,ko:K20112	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BMDPJNLG_01130	1.14e-115	ntd	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside
BMDPJNLG_01132	4.94e-309	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
BMDPJNLG_01133	8.12e-60	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
BMDPJNLG_01134	0.0	sufB	-	-	O	ko:K07033,ko:K09014	-	ko00000	assembly protein SufB
BMDPJNLG_01135	6.98e-78	nifU	-	-	C	ko:K04488	-	ko00000	SUF system FeS assembly protein, NifU family
BMDPJNLG_01136	1.39e-224	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BMDPJNLG_01137	6.22e-232	sufD	-	-	O	ko:K07033,ko:K09015	-	ko00000	FeS assembly protein SufD
BMDPJNLG_01138	3.64e-178	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	FeS assembly ATPase SufC
BMDPJNLG_01139	1.51e-154	-	-	-	C	-	-	-	2Fe-2S iron-sulfur cluster binding domain
BMDPJNLG_01140	1.24e-188	-	5.2.1.13	-	Q	ko:K09835	ko00906,ko01100,ko01110,map00906,map01100,map01110	ko00000,ko00001,ko00002,ko01000	HI0933-like protein
BMDPJNLG_01141	7.13e-67	-	-	-	K	-	-	-	helix_turn_helix gluconate operon transcriptional repressor
BMDPJNLG_01142	1.9e-228	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
BMDPJNLG_01143	2.36e-213	adh2	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
BMDPJNLG_01144	2.24e-71	ykoJ	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
BMDPJNLG_01145	1.23e-175	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
BMDPJNLG_01147	7.14e-170	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BMDPJNLG_01148	3.05e-110	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin synthase
BMDPJNLG_01149	3.61e-288	ribBA	3.5.4.25, 4.1.99.12	-	H	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
BMDPJNLG_01150	1.91e-103	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
BMDPJNLG_01151	1.32e-114	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
BMDPJNLG_01152	1.16e-13	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
BMDPJNLG_01153	2.02e-35	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
BMDPJNLG_01157	0.0	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
BMDPJNLG_01158	4.2e-249	pbpX1	-	-	V	-	-	-	Beta-lactamase
BMDPJNLG_01159	1.05e-253	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BMDPJNLG_01160	2.22e-277	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
BMDPJNLG_01161	6.89e-185	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
BMDPJNLG_01162	3.01e-224	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BMDPJNLG_01163	1.4e-281	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
BMDPJNLG_01164	1.22e-104	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
BMDPJNLG_01165	5.89e-314	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
BMDPJNLG_01166	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
BMDPJNLG_01167	6.25e-246	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
BMDPJNLG_01168	1.36e-154	potE	-	-	E	-	-	-	Amino Acid
BMDPJNLG_01169	1.24e-57	potE	-	-	E	-	-	-	Amino acid permease
BMDPJNLG_01170	2.06e-46	potE	-	-	E	-	-	-	Amino Acid
BMDPJNLG_01171	3.9e-137	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
BMDPJNLG_01172	8.72e-297	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
BMDPJNLG_01173	4.43e-292	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
BMDPJNLG_01174	4.06e-287	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BMDPJNLG_01175	1.98e-193	-	-	-	-	-	-	-	-
BMDPJNLG_01176	4.73e-32	-	-	-	S	-	-	-	Domain of unknown function (DUF4417)
BMDPJNLG_01177	0.000145	-	-	-	M	ko:K11021	-	ko00000,ko02042	COG3209 Rhs family protein
BMDPJNLG_01178	8.49e-85	-	-	-	E	-	-	-	amino acid
BMDPJNLG_01179	6.08e-161	yagE	-	-	E	-	-	-	Amino acid permease
BMDPJNLG_01180	9.58e-112	-	3.4.21.96	-	S	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	SLAP domain
BMDPJNLG_01181	3.17e-203	XK27_10395	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BMDPJNLG_01182	5.13e-287	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
BMDPJNLG_01183	1.8e-143	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
BMDPJNLG_01184	8.63e-191	degV3	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
BMDPJNLG_01185	9.85e-49	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
BMDPJNLG_01186	3.67e-88	-	-	-	P	-	-	-	NhaP-type Na H and K H
BMDPJNLG_01187	7.56e-48	nhaP4	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
BMDPJNLG_01188	2.4e-118	nhaP4	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
BMDPJNLG_01189	2.15e-198	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BMDPJNLG_01190	1e-168	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BMDPJNLG_01191	1.5e-195	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
BMDPJNLG_01192	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BMDPJNLG_01193	8.35e-315	trmFO	2.1.1.74	-	J	ko:K04094	-	ko00000,ko01000,ko03016,ko03036	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
BMDPJNLG_01194	5.99e-180	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Phage integrase, N-terminal SAM-like domain
BMDPJNLG_01195	4.67e-116	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
BMDPJNLG_01196	1.4e-313	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
BMDPJNLG_01197	9.4e-232	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
BMDPJNLG_01198	6.42e-110	-	-	-	C	-	-	-	Aldo keto reductase
BMDPJNLG_01199	8.85e-121	-	-	-	M	-	-	-	LysM domain protein
BMDPJNLG_01200	4.19e-10	-	-	-	-	ko:K07473	-	ko00000,ko02048	-
BMDPJNLG_01201	1.78e-276	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BMDPJNLG_01202	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 31 family
BMDPJNLG_01203	2.82e-201	-	-	-	I	-	-	-	alpha/beta hydrolase fold
BMDPJNLG_01204	7.8e-167	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
BMDPJNLG_01205	1.69e-258	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
BMDPJNLG_01206	2.01e-163	-	-	-	-	-	-	-	-
BMDPJNLG_01207	2.43e-263	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
BMDPJNLG_01208	7.36e-291	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
BMDPJNLG_01209	5.01e-171	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
BMDPJNLG_01210	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
BMDPJNLG_01211	2.62e-176	-	-	-	-	-	-	-	-
BMDPJNLG_01212	8.37e-161	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
BMDPJNLG_01213	4.15e-232	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BMDPJNLG_01214	3.57e-29	noxC	1.5.1.39	-	C	ko:K19286	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	coenzyme F420-1:gamma-L-glutamate ligase activity
BMDPJNLG_01215	9.95e-59	noxC	1.5.1.39	-	C	ko:K19286	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	coenzyme F420-1:gamma-L-glutamate ligase activity
BMDPJNLG_01216	4.14e-251	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
BMDPJNLG_01218	2.7e-79	-	-	-	-	-	-	-	-
BMDPJNLG_01220	3.92e-153	-	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
BMDPJNLG_01221	1.37e-287	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
BMDPJNLG_01222	2.26e-31	-	-	-	S	-	-	-	Transglycosylase associated protein
BMDPJNLG_01223	3.81e-18	-	-	-	S	-	-	-	CsbD-like
BMDPJNLG_01224	4.76e-213	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
BMDPJNLG_01225	6.11e-171	-	-	-	V	-	-	-	ABC transporter transmembrane region
BMDPJNLG_01226	2.36e-217	degV1	-	-	S	-	-	-	DegV family
BMDPJNLG_01227	5.56e-217	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, phosphonate, periplasmic substrate-binding protein
BMDPJNLG_01228	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
BMDPJNLG_01229	3.87e-97	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
BMDPJNLG_01230	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
BMDPJNLG_01231	1.89e-47	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BMDPJNLG_01232	4.83e-104	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
BMDPJNLG_01233	2.74e-65	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
BMDPJNLG_01234	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BMDPJNLG_01235	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BMDPJNLG_01236	5.14e-268	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BMDPJNLG_01237	1.13e-48	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain protein YaaA
BMDPJNLG_01238	7.72e-279	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
BMDPJNLG_01239	2.97e-76	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
BMDPJNLG_01240	1.33e-275	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
BMDPJNLG_01241	2.05e-163	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BMDPJNLG_01242	6.03e-56	-	-	-	-	-	-	-	-
BMDPJNLG_01243	1.27e-134	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
BMDPJNLG_01244	9.48e-43	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
BMDPJNLG_01245	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BMDPJNLG_01246	3.63e-137	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
BMDPJNLG_01247	1.9e-190	ylmH	-	-	S	-	-	-	S4 domain protein
BMDPJNLG_01248	2.42e-60	yggT	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
BMDPJNLG_01249	1.43e-96	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
BMDPJNLG_01250	2.52e-300	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BMDPJNLG_01251	1.54e-309	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
BMDPJNLG_01252	3.14e-194	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
BMDPJNLG_01253	1.65e-265	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BMDPJNLG_01254	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BMDPJNLG_01255	4.43e-224	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BMDPJNLG_01256	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
BMDPJNLG_01257	6.55e-72	ftsL	-	-	D	-	-	-	Cell division protein FtsL
BMDPJNLG_01258	8.61e-223	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
BMDPJNLG_01259	5.63e-102	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
BMDPJNLG_01260	1.02e-72	-	-	-	S	-	-	-	Protein of unknown function (DUF3397)
BMDPJNLG_01261	1.4e-09	-	-	-	S	-	-	-	Protein of unknown function (DUF4044)
BMDPJNLG_01262	5.43e-122	mreD	-	-	-	ko:K03571	-	ko00000,ko03036	-
BMDPJNLG_01263	8.27e-189	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
BMDPJNLG_01264	8.26e-226	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
BMDPJNLG_01265	6.18e-150	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
BMDPJNLG_01266	1.06e-162	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
BMDPJNLG_01267	1.22e-306	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
BMDPJNLG_01268	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
BMDPJNLG_01269	2.91e-67	-	-	-	-	-	-	-	-
BMDPJNLG_01270	1.41e-164	-	-	-	S	ko:K06926	-	ko00000	AAA domain, putative AbiEii toxin, Type IV TA system
BMDPJNLG_01271	0.0	yoaB	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
BMDPJNLG_01272	9.25e-13	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
BMDPJNLG_01273	2.09e-59	-	-	-	-	-	-	-	-
BMDPJNLG_01274	3.33e-123	-	-	-	S	-	-	-	Protein of unknown function (DUF3990)
BMDPJNLG_01275	5.55e-216	yfdH	-	GT2	M	ko:K12999	-	ko00000,ko01000,ko01003,ko01005	Glycosyltransferase, group 2 family protein
BMDPJNLG_01276	1.06e-86	-	-	-	S	-	-	-	GtrA-like protein
BMDPJNLG_01277	3.97e-57	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
BMDPJNLG_01278	6.01e-153	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
BMDPJNLG_01279	2.1e-232	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
BMDPJNLG_01280	2.35e-286	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BMDPJNLG_01281	1.13e-272	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
BMDPJNLG_01282	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
BMDPJNLG_01283	3.07e-142	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
BMDPJNLG_01284	8.08e-110	-	-	-	S	-	-	-	Protein of unknown function (DUF1694)
BMDPJNLG_01285	1.47e-302	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
BMDPJNLG_01286	1.35e-56	-	-	-	-	-	-	-	-
BMDPJNLG_01287	9.45e-104	uspA	-	-	T	-	-	-	universal stress protein
BMDPJNLG_01288	1.18e-275	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
BMDPJNLG_01289	5.13e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
BMDPJNLG_01290	1.59e-68	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
BMDPJNLG_01291	4.81e-227	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
BMDPJNLG_01292	2.54e-42	-	-	-	S	-	-	-	Protein of unknown function (DUF1146)
BMDPJNLG_01293	2.45e-93	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
BMDPJNLG_01294	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BMDPJNLG_01295	1.48e-221	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BMDPJNLG_01296	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
BMDPJNLG_01297	5.38e-119	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BMDPJNLG_01298	2.48e-83	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
BMDPJNLG_01299	4.83e-37	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BMDPJNLG_01300	5.87e-166	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
BMDPJNLG_01301	4.34e-145	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BMDPJNLG_01302	1.66e-243	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
BMDPJNLG_01303	1.24e-198	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
BMDPJNLG_01304	6.6e-237	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BMDPJNLG_01305	7.02e-146	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
BMDPJNLG_01306	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Domain of unknown function (DUF1727)
BMDPJNLG_01309	7.95e-250	ampC	-	-	V	-	-	-	Beta-lactamase
BMDPJNLG_01310	1.19e-106	-	-	-	EGP	-	-	-	Major Facilitator
BMDPJNLG_01311	7.86e-212	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
BMDPJNLG_01312	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	AAA domain (Cdc48 subfamily)
BMDPJNLG_01313	5.08e-149	sipS3	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
BMDPJNLG_01314	2.58e-310	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
BMDPJNLG_01315	5.27e-314	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
BMDPJNLG_01316	6.36e-173	-	-	-	S	-	-	-	PFAM Archaeal ATPase
BMDPJNLG_01317	1.95e-221	-	-	-	V	-	-	-	HNH endonuclease
BMDPJNLG_01319	6.65e-179	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
BMDPJNLG_01320	6.45e-291	-	-	-	E	-	-	-	amino acid
BMDPJNLG_01321	5.12e-242	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
BMDPJNLG_01322	1.84e-263	-	4.2.1.126	-	S	ko:K07106,ko:K09963	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Bacterial protein of unknown function (DUF871)
BMDPJNLG_01325	6.69e-239	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
BMDPJNLG_01326	0.0	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BMDPJNLG_01327	1.23e-313	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BMDPJNLG_01328	3.42e-30	-	-	-	S	-	-	-	HicA toxin of bacterial toxin-antitoxin,
BMDPJNLG_01329	2.82e-17	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
BMDPJNLG_01330	2.73e-21	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
BMDPJNLG_01331	1.18e-48	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	Bacterial toxin of type II toxin-antitoxin system, YafQ
BMDPJNLG_01332	3.48e-105	-	-	-	V	-	-	-	Type I restriction modification DNA specificity domain
BMDPJNLG_01333	5.44e-299	-	-	-	V	-	-	-	N-6 DNA Methylase
BMDPJNLG_01334	3.89e-128	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
BMDPJNLG_01335	1.71e-156	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
BMDPJNLG_01336	7.98e-35	-	-	-	GKT	-	-	-	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BMDPJNLG_01337	4.68e-25	-	2.7.1.200	-	G	ko:K02774	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
BMDPJNLG_01338	8.24e-257	-	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
BMDPJNLG_01339	7.62e-32	-	2.7.1.200	-	G	ko:K02773	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BMDPJNLG_01341	1.78e-21	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
BMDPJNLG_01342	5.85e-67	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
BMDPJNLG_01344	1.54e-87	doc	-	-	S	ko:K07341	-	ko00000,ko02048	Fic/DOC family
BMDPJNLG_01345	2.78e-45	-	-	-	-	-	-	-	-
BMDPJNLG_01347	7.63e-28	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
BMDPJNLG_01349	2.62e-155	-	-	-	L	-	-	-	This gene contains a nucleotide ambiguity which may be the result of a sequencing error
BMDPJNLG_01351	1.31e-231	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
BMDPJNLG_01354	2.37e-194	-	-	-	S	-	-	-	Phage minor structural protein
BMDPJNLG_01355	3.54e-36	-	-	-	S	-	-	-	phage tail
BMDPJNLG_01356	2.4e-69	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
BMDPJNLG_01357	1.69e-178	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
BMDPJNLG_01362	1.42e-23	-	-	-	S	-	-	-	Bacteriophage HK97-gp10, putative tail-component
BMDPJNLG_01364	1.2e-23	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
BMDPJNLG_01365	7.4e-57	-	-	-	S	-	-	-	Phage capsid family
BMDPJNLG_01366	2.67e-95	-	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S14 family
BMDPJNLG_01367	2.91e-103	-	-	-	S	-	-	-	Phage portal protein
BMDPJNLG_01368	5.14e-105	ykuP	-	-	C	ko:K03839	-	ko00000	Flavodoxin
BMDPJNLG_01369	3.7e-113	gtcA1	-	-	S	-	-	-	Teichoic acid glycosylation protein
BMDPJNLG_01370	1.67e-143	-	-	-	-	-	-	-	-
BMDPJNLG_01372	1.66e-143	-	-	-	E	-	-	-	Belongs to the SOS response-associated peptidase family
BMDPJNLG_01373	1.66e-244	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
BMDPJNLG_01374	4.29e-116	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	MafB19-like deaminase
BMDPJNLG_01375	4.57e-135	-	-	-	S	ko:K06872	-	ko00000	TPM domain
BMDPJNLG_01376	1.71e-173	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
BMDPJNLG_01377	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
BMDPJNLG_01378	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BMDPJNLG_01379	2.72e-189	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
BMDPJNLG_01380	5.17e-129	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
BMDPJNLG_01381	2.56e-193	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
BMDPJNLG_01382	9.99e-53	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
BMDPJNLG_01383	2.91e-190	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
BMDPJNLG_01384	3.12e-308	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BMDPJNLG_01385	5.52e-113	-	-	-	-	-	-	-	-
BMDPJNLG_01386	0.0	-	-	-	S	-	-	-	SLAP domain
BMDPJNLG_01387	5.4e-226	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BMDPJNLG_01388	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
BMDPJNLG_01389	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
BMDPJNLG_01390	4.86e-157	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
BMDPJNLG_01391	5.79e-217	-	-	-	K	-	-	-	LysR substrate binding domain
BMDPJNLG_01392	4.91e-111	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
BMDPJNLG_01393	3.16e-52	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
BMDPJNLG_01394	1.74e-293	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
BMDPJNLG_01395	4e-204	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
BMDPJNLG_01396	5.61e-226	hepT	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
BMDPJNLG_01397	1.76e-165	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
BMDPJNLG_01398	0.0	cydD	-	-	CO	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BMDPJNLG_01399	0.0	cydC	-	-	CO	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
BMDPJNLG_01400	7.95e-302	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
BMDPJNLG_01401	6.59e-160	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
BMDPJNLG_01402	1.17e-210	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
BMDPJNLG_01403	1.44e-164	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BMDPJNLG_01404	4.67e-54	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BMDPJNLG_01405	9.07e-51	-	-	-	S	-	-	-	CRISPR-associated protein (Cas_Csn2)
BMDPJNLG_01406	1.16e-284	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
BMDPJNLG_01407	1.34e-22	-	-	-	S	-	-	-	CRISPR-associated protein (Cas_Csn2)
BMDPJNLG_01408	6.94e-199	yqfL	2.7.11.33, 2.7.4.28	-	F	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
BMDPJNLG_01409	4.83e-30	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
BMDPJNLG_01410	1.08e-92	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
BMDPJNLG_01411	3.51e-224	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
BMDPJNLG_01412	3.58e-129	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
BMDPJNLG_01413	1.37e-216	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BMDPJNLG_01414	4.11e-173	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
BMDPJNLG_01415	9.03e-229	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
BMDPJNLG_01416	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
BMDPJNLG_01417	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
BMDPJNLG_01418	9e-255	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
BMDPJNLG_01419	5.03e-76	-	-	-	K	-	-	-	Helix-turn-helix domain
BMDPJNLG_01420	1.17e-144	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BMDPJNLG_01421	1.05e-221	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
BMDPJNLG_01422	1.11e-234	-	-	-	K	-	-	-	Transcriptional regulator
BMDPJNLG_01423	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
BMDPJNLG_01424	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
BMDPJNLG_01425	9.39e-141	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
BMDPJNLG_01426	0.0	snf	-	-	KL	-	-	-	domain protein
BMDPJNLG_01427	1.73e-48	-	-	-	-	-	-	-	-
BMDPJNLG_01428	1.24e-08	-	-	-	-	-	-	-	-
BMDPJNLG_01429	4.83e-136	pncA	-	-	Q	-	-	-	Isochorismatase family
BMDPJNLG_01430	1.51e-159	-	-	-	-	-	-	-	-
BMDPJNLG_01433	4.13e-83	-	-	-	-	-	-	-	-
BMDPJNLG_01434	3.56e-47	-	-	-	-	-	-	-	-
BMDPJNLG_01435	1.42e-101	yveB	-	-	I	-	-	-	PAP2 superfamily
BMDPJNLG_01436	5.68e-34	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
BMDPJNLG_01437	7.81e-186	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
BMDPJNLG_01438	6.87e-202	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
BMDPJNLG_01439	7.4e-196	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
BMDPJNLG_01440	1.68e-177	pstB	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
BMDPJNLG_01441	3.12e-135	-	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
BMDPJNLG_01442	7.4e-154	phoB	-	-	T	ko:K07658	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C terminal
BMDPJNLG_01443	0.0	phoR	2.7.13.3	-	T	ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
BMDPJNLG_01444	6.04e-249	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BMDPJNLG_01445	8.69e-96	nrdI	-	-	F	ko:K03647	-	ko00000	NrdI Flavodoxin like
BMDPJNLG_01446	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BMDPJNLG_01447	0.0	-	-	-	L	-	-	-	Transposase
BMDPJNLG_01448	4.92e-43	-	-	-	L	-	-	-	Transposase DDE domain
BMDPJNLG_01449	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
BMDPJNLG_01450	1.15e-204	-	-	-	S	-	-	-	EDD domain protein, DegV family
BMDPJNLG_01451	2.06e-88	-	-	-	-	-	-	-	-
BMDPJNLG_01452	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
BMDPJNLG_01453	0.0	carB1	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
BMDPJNLG_01454	4.13e-255	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
BMDPJNLG_01455	2.28e-221	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
BMDPJNLG_01456	6.39e-102	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
BMDPJNLG_01457	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
BMDPJNLG_01458	1.61e-70	-	-	-	-	-	-	-	-
BMDPJNLG_01462	9.86e-146	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
BMDPJNLG_01463	3.39e-88	-	-	-	S	ko:K06915	-	ko00000	cog cog0433
BMDPJNLG_01464	5.94e-148	-	-	-	I	-	-	-	Acid phosphatase homologues
BMDPJNLG_01466	9.55e-303	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
BMDPJNLG_01467	1.61e-80	-	-	-	S	ko:K07006	-	ko00000	Pyridoxamine 5'-phosphate oxidase
BMDPJNLG_01468	5.93e-302	XK27_01810	-	-	S	-	-	-	Calcineurin-like phosphoesterase
BMDPJNLG_01470	0.0	-	-	-	S	-	-	-	SLAP domain
BMDPJNLG_01471	0.0	hsdR	3.1.21.3	-	L	ko:K01153	-	ko00000,ko01000,ko02048	DEAD/DEAH box helicase
BMDPJNLG_01472	1.35e-208	-	-	-	S	ko:K06926	-	ko00000	AAA domain, putative AbiEii toxin, Type IV TA system
BMDPJNLG_01473	5.22e-54	-	-	-	S	-	-	-	RloB-like protein
BMDPJNLG_01474	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
BMDPJNLG_01475	7.36e-119	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
BMDPJNLG_01476	4.81e-77	-	-	-	S	-	-	-	SIR2-like domain
BMDPJNLG_01478	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
BMDPJNLG_01479	5.41e-172	cysA	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
BMDPJNLG_01480	2.1e-31	-	-	-	-	-	-	-	-
BMDPJNLG_01481	1.69e-06	-	-	-	-	-	-	-	-
BMDPJNLG_01482	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
BMDPJNLG_01483	3.78e-230	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
BMDPJNLG_01484	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
BMDPJNLG_01485	8.03e-160	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
BMDPJNLG_01486	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
BMDPJNLG_01487	1.21e-19	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
BMDPJNLG_01488	5.76e-144	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
BMDPJNLG_01489	2.26e-148	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
BMDPJNLG_01490	1.18e-177	oppC5	-	-	P	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
BMDPJNLG_01491	1.6e-220	oppB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
BMDPJNLG_01492	5.41e-228	oppF	-	-	P	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
BMDPJNLG_01493	5.15e-247	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
BMDPJNLG_01494	1.48e-45	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BMDPJNLG_01495	3.69e-233	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
BMDPJNLG_01496	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BMDPJNLG_01497	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
BMDPJNLG_01498	8.29e-75	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
BMDPJNLG_01499	1.33e-35	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
BMDPJNLG_01500	3.12e-41	-	-	-	-	-	-	-	-
BMDPJNLG_01501	3.84e-160	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
BMDPJNLG_01502	2.61e-154	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
BMDPJNLG_01503	1.03e-209	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
BMDPJNLG_01504	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
BMDPJNLG_01505	3.28e-179	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
BMDPJNLG_01506	7.82e-311	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BMDPJNLG_01507	5.15e-219	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BMDPJNLG_01508	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BMDPJNLG_01509	2.37e-46	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
BMDPJNLG_01510	5.97e-145	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
BMDPJNLG_01511	2.19e-100	-	-	-	S	-	-	-	ASCH
BMDPJNLG_01512	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
BMDPJNLG_01513	1.83e-190	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
BMDPJNLG_01514	4.47e-196	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
BMDPJNLG_01515	4.4e-47	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
BMDPJNLG_01516	1.08e-238	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
BMDPJNLG_01517	8.47e-182	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
BMDPJNLG_01518	3.38e-86	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BMDPJNLG_01519	7.98e-93	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
BMDPJNLG_01520	2.11e-133	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BMDPJNLG_01521	2.14e-257	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
BMDPJNLG_01522	3.94e-64	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
BMDPJNLG_01523	6.82e-66	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
BMDPJNLG_01524	5.24e-194	-	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BMDPJNLG_01525	0.0	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
BMDPJNLG_01526	0.0	-	-	-	L	-	-	-	Transposase
BMDPJNLG_01529	2.07e-38	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
BMDPJNLG_01530	1.24e-75	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
BMDPJNLG_01531	1.48e-134	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BMDPJNLG_01532	7.92e-218	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
BMDPJNLG_01533	1.88e-125	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
BMDPJNLG_01534	1.36e-96	yjcF	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
BMDPJNLG_01535	7.09e-184	aatB	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
BMDPJNLG_01536	6.89e-136	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
BMDPJNLG_01537	3e-139	yecS_2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
BMDPJNLG_01538	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
BMDPJNLG_01539	1.35e-154	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
BMDPJNLG_01540	7.53e-163	gpm2	-	-	G	-	-	-	Phosphoglycerate mutase family
BMDPJNLG_01541	1.87e-308	-	-	-	S	-	-	-	response to antibiotic
BMDPJNLG_01542	1.82e-160	-	-	-	-	-	-	-	-
BMDPJNLG_01543	0.0	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
BMDPJNLG_01544	7.34e-86	-	2.7.1.191	-	G	ko:K02793	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
BMDPJNLG_01545	1.42e-57	-	-	-	-	-	-	-	-
BMDPJNLG_01546	4.65e-14	-	-	-	-	-	-	-	-
BMDPJNLG_01547	2.26e-153	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
BMDPJNLG_01548	0.0	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
BMDPJNLG_01549	2.09e-129	treR	-	-	K	ko:K03486	-	ko00000,ko03000	UTRA
BMDPJNLG_01550	0.0	treB	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
BMDPJNLG_01551	2.76e-86	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
BMDPJNLG_01552	1.13e-241	-	-	-	L	ko:K07478	-	ko00000	AAA C-terminal domain
BMDPJNLG_01553	0.0	yqjE	3.4.11.14, 3.4.11.4	-	E	ko:K01258,ko:K01263	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
BMDPJNLG_01554	5.74e-108	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
BMDPJNLG_01555	1.87e-290	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
BMDPJNLG_01556	2.26e-123	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
BMDPJNLG_01557	3.1e-127	pdxK	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
BMDPJNLG_01558	1.59e-259	pbpX1	-	-	V	-	-	-	Beta-lactamase
BMDPJNLG_01559	1.12e-149	maa3	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
BMDPJNLG_01560	1.12e-104	yvbK	-	-	K	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
BMDPJNLG_01561	4e-261	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
BMDPJNLG_01562	3.85e-180	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
BMDPJNLG_01563	7.8e-10	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
BMDPJNLG_01564	9.91e-150	-	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Ham1 family
BMDPJNLG_01565	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2207)
BMDPJNLG_01566	2.99e-202	cinI	-	-	S	ko:K06889	-	ko00000	Serine hydrolase (FSH1)
BMDPJNLG_01567	5.27e-266	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
BMDPJNLG_01569	3.02e-228	lipA	-	-	I	-	-	-	Carboxylesterase family
BMDPJNLG_01570	1.82e-86	yusI	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	Belongs to the ArsC family
BMDPJNLG_01571	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
BMDPJNLG_01572	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
BMDPJNLG_01573	6.92e-145	supH	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
BMDPJNLG_01574	4.33e-69	-	-	-	-	-	-	-	-
BMDPJNLG_01575	8.51e-50	-	-	-	-	-	-	-	-
BMDPJNLG_01576	2.1e-82	-	-	-	S	-	-	-	Alpha beta hydrolase
BMDPJNLG_01577	2.19e-49	-	-	-	S	-	-	-	Alpha beta hydrolase
BMDPJNLG_01578	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
BMDPJNLG_01579	2.88e-105	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
BMDPJNLG_01580	8.6e-128	ltrA	-	-	S	-	-	-	Bacterial low temperature requirement A protein (LtrA)
BMDPJNLG_01581	6.82e-223	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
BMDPJNLG_01582	6.84e-183	-	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
BMDPJNLG_01583	3.57e-47	-	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
BMDPJNLG_01584	5.14e-38	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
BMDPJNLG_01585	0.0	yfkN	3.1.3.6, 3.1.4.16	-	F	ko:K01119	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
BMDPJNLG_01586	1.25e-38	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
BMDPJNLG_01587	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
BMDPJNLG_01588	5.46e-233	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
BMDPJNLG_01589	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
BMDPJNLG_01590	1.21e-213	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
BMDPJNLG_01591	6.74e-213	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
BMDPJNLG_01592	7.97e-82	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
BMDPJNLG_01593	1.81e-169	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
BMDPJNLG_01594	7.57e-135	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
BMDPJNLG_01595	4.65e-168	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
BMDPJNLG_01596	4.3e-175	-	-	-	S	-	-	-	Alpha/beta hydrolase family
BMDPJNLG_01597	3.6e-106	-	-	-	C	-	-	-	Flavodoxin
BMDPJNLG_01598	1.35e-71	ytpP	-	-	CO	-	-	-	Thioredoxin
BMDPJNLG_01599	4.18e-155	XK27_10290	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
BMDPJNLG_01600	2.05e-248	-	-	-	-	-	-	-	-
BMDPJNLG_01601	3.8e-315	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
BMDPJNLG_01602	3.31e-299	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
BMDPJNLG_01603	7.29e-220	-	-	-	S	-	-	-	SLAP domain
BMDPJNLG_01604	4.2e-93	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
BMDPJNLG_01605	4.5e-107	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
BMDPJNLG_01606	9.84e-108	-	-	-	L	-	-	-	Resolvase, N-terminal
BMDPJNLG_01607	1.86e-197	-	-	-	M	-	-	-	Peptidase family M1 domain
BMDPJNLG_01608	2.97e-244	-	-	-	S	-	-	-	Bacteriocin helveticin-J
BMDPJNLG_01609	2.39e-26	-	-	-	-	-	-	-	-
BMDPJNLG_01610	1.8e-66	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
BMDPJNLG_01611	2.27e-191	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
BMDPJNLG_01612	1.62e-250	purD	6.3.4.13	-	F	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the GARS family
BMDPJNLG_01614	1.41e-71	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
BMDPJNLG_01615	7.51e-16	-	-	-	L	-	-	-	Transposase
BMDPJNLG_01616	1.01e-22	-	-	-	L	-	-	-	Transposase
BMDPJNLG_01617	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
BMDPJNLG_01618	5.85e-86	nt5e	3.1.3.18	-	L	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	haloacid dehalogenase-like hydrolase
BMDPJNLG_01619	1.52e-157	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
BMDPJNLG_01620	1.78e-163	sga	5.1.3.22	-	G	ko:K03079	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Xylose isomerase-like TIM barrel
BMDPJNLG_01621	2.85e-115	ulaD	4.1.1.85, 4.1.2.43	-	G	ko:K03078,ko:K08093	ko00030,ko00040,ko00053,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00040,map00053,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Orotidine 5'-phosphate decarboxylase / HUMPS family
BMDPJNLG_01622	4.82e-42	ulaB	2.7.1.194	-	G	ko:K02822	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
BMDPJNLG_01623	1.14e-293	sgaT	-	-	S	ko:K03475	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
BMDPJNLG_01624	4.93e-80	-	2.7.1.194	-	G	ko:K02821	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BMDPJNLG_01625	6.33e-221	ulaG	-	-	S	ko:K03476	ko00053,ko01100,ko01120,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Beta-lactamase superfamily domain
BMDPJNLG_01626	1.67e-101	-	-	-	S	-	-	-	helix_turn_helix, Deoxyribose operon repressor
BMDPJNLG_01627	6.72e-177	-	-	-	EP	-	-	-	Plasmid replication protein
BMDPJNLG_01628	4.63e-32	-	-	-	-	-	-	-	-
BMDPJNLG_01629	0.0	oatA	-	-	I	-	-	-	Acyltransferase
BMDPJNLG_01630	1.88e-309	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BMDPJNLG_01631	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
BMDPJNLG_01632	1.58e-140	yngC	-	-	S	-	-	-	SNARE associated Golgi protein
BMDPJNLG_01633	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
BMDPJNLG_01634	1.14e-230	gyaR	1.1.1.26, 1.1.1.399, 1.1.1.95	-	CH	ko:K00015,ko:K00058	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BMDPJNLG_01635	2.13e-189	yxeH	-	-	S	-	-	-	hydrolase
BMDPJNLG_01636	6.32e-41	-	-	-	S	-	-	-	reductase
BMDPJNLG_01637	2.98e-50	-	-	-	S	-	-	-	reductase
BMDPJNLG_01638	1.19e-43	-	-	-	S	-	-	-	reductase
BMDPJNLG_01639	3.82e-276	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BMDPJNLG_01641	9.14e-283	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
BMDPJNLG_01642	7.81e-169	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
BMDPJNLG_01646	1.3e-282	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BMDPJNLG_01647	1.26e-223	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
BMDPJNLG_01648	3.01e-54	-	-	-	-	-	-	-	-
BMDPJNLG_01649	1.73e-167	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
BMDPJNLG_01650	1.28e-174	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
BMDPJNLG_01651	4.39e-116	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
BMDPJNLG_01652	2.11e-115	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase homologues.
BMDPJNLG_01653	4.52e-56	-	-	-	-	-	-	-	-
BMDPJNLG_01654	0.0	-	-	-	S	-	-	-	O-antigen ligase like membrane protein
BMDPJNLG_01655	8.77e-144	-	-	-	-	-	-	-	-
BMDPJNLG_01656	1.15e-284	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
BMDPJNLG_01657	8.66e-39	nrdI	-	-	F	ko:K03647	-	ko00000	NrdI Flavodoxin like
BMDPJNLG_01658	1.96e-226	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BMDPJNLG_01659	5.68e-110	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
BMDPJNLG_01660	5.61e-72	-	-	-	S	-	-	-	pyridoxamine 5-phosphate
BMDPJNLG_01661	1.85e-164	yobV3	-	-	K	-	-	-	WYL domain
BMDPJNLG_01662	2.6e-110	fnr	-	-	K	ko:K21562	-	ko00000,ko03000	Transcriptional regulator, Crp Fnr family
BMDPJNLG_01663	1.45e-102	dpsB	-	-	P	-	-	-	Belongs to the Dps family
BMDPJNLG_01664	4.22e-41	-	-	-	C	-	-	-	Heavy-metal-associated domain
BMDPJNLG_01665	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	E1-E2 ATPase
BMDPJNLG_01666	6.34e-40	-	-	-	S	-	-	-	Pyridoxamine 5'-phosphate oxidase
BMDPJNLG_01667	1.03e-34	-	-	-	S	-	-	-	Pyridoxamine 5'-phosphate oxidase
BMDPJNLG_01668	1.77e-220	-	-	-	S	-	-	-	Conserved hypothetical protein 698
BMDPJNLG_01670	5e-227	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
BMDPJNLG_01671	1.31e-128	-	-	-	I	-	-	-	PAP2 superfamily
BMDPJNLG_01672	1.14e-192	-	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
BMDPJNLG_01673	3.52e-311	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
BMDPJNLG_01674	2.32e-127	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
BMDPJNLG_01675	3.68e-93	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Glycerol-3-phosphate cytidylyltransferase
BMDPJNLG_01676	1.87e-159	gntR1	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
BMDPJNLG_01677	1.53e-232	-	-	-	-	-	-	-	-
BMDPJNLG_01678	0.0	oppA2	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
BMDPJNLG_01681	3.1e-305	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	NADH oxidase
BMDPJNLG_01682	1.48e-14	-	-	-	-	-	-	-	-
BMDPJNLG_01683	5.24e-31	-	-	-	S	-	-	-	transposase or invertase
BMDPJNLG_01684	9.6e-309	slpX	-	-	S	-	-	-	SLAP domain
BMDPJNLG_01685	1.43e-186	-	-	-	K	-	-	-	SIS domain
BMDPJNLG_01686	3.01e-154	rpiA1	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
BMDPJNLG_01687	1.03e-237	XK27_10475	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
BMDPJNLG_01688	1.93e-266	araT	2.6.1.57	-	E	ko:K00832,ko:K00841	ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
BMDPJNLG_01689	2.53e-117	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
BMDPJNLG_01690	4.03e-75	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
BMDPJNLG_01691	1.91e-97	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
BMDPJNLG_01692	6.82e-292	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
BMDPJNLG_01693	4.24e-178	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
BMDPJNLG_01694	6.64e-94	-	-	-	-	-	-	-	-
BMDPJNLG_01695	1.06e-159	dgk2	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
BMDPJNLG_01696	9.85e-154	dak	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
BMDPJNLG_01697	1.15e-173	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
BMDPJNLG_01698	4.04e-99	-	-	-	S	-	-	-	Aldo/keto reductase family
BMDPJNLG_01699	9.99e-89	-	-	-	S	-	-	-	Aldo/keto reductase family
BMDPJNLG_01700	3.63e-221	yufQ	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
BMDPJNLG_01701	2.07e-260	mglC	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
BMDPJNLG_01702	0.0	mglA	3.6.3.17	-	S	ko:K02056,ko:K06400	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
BMDPJNLG_01703	4.57e-232	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
BMDPJNLG_01704	9.76e-256	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
BMDPJNLG_01705	5.9e-130	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
BMDPJNLG_01706	0.0	ppc	4.1.1.31	-	H	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
BMDPJNLG_01707	0.0	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
BMDPJNLG_01708	5.26e-244	-	-	-	S	-	-	-	DUF218 domain
BMDPJNLG_01709	1.2e-155	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
BMDPJNLG_01710	3.49e-140	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Transcriptional regulator
BMDPJNLG_01711	3.62e-202	-	-	-	EGP	-	-	-	Major facilitator Superfamily
BMDPJNLG_01712	1.05e-67	-	-	-	-	-	-	-	-
BMDPJNLG_01713	1.91e-200	mutR	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
BMDPJNLG_01714	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
BMDPJNLG_01715	1.68e-55	yoeB	-	-	S	ko:K19158	-	ko00000,ko01000,ko02048	YoeB-like toxin of bacterial type II toxin-antitoxin system
BMDPJNLG_01716	2.49e-63	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
BMDPJNLG_01717	5.71e-263	napA	-	-	P	-	-	-	Sodium/hydrogen exchanger family
BMDPJNLG_01718	0.0	cadA	-	-	P	-	-	-	P-type ATPase
BMDPJNLG_01719	3.41e-107	ykuL	-	-	S	-	-	-	(CBS) domain
BMDPJNLG_01720	5.11e-265	-	-	-	S	-	-	-	Membrane
BMDPJNLG_01721	1.42e-58	-	-	-	-	-	-	-	-
BMDPJNLG_01722	1.3e-26	-	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
BMDPJNLG_01723	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
BMDPJNLG_01724	2.95e-304	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
BMDPJNLG_01725	4.98e-48	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
BMDPJNLG_01726	6.8e-316	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
BMDPJNLG_01727	1.97e-227	pbpX2	-	-	V	-	-	-	Beta-lactamase
BMDPJNLG_01728	2.5e-172	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
BMDPJNLG_01729	1.34e-183	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
BMDPJNLG_01730	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
BMDPJNLG_01731	1.96e-49	-	-	-	-	-	-	-	-
BMDPJNLG_01732	0.0	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
BMDPJNLG_01733	1.68e-161	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
BMDPJNLG_01734	1.89e-285	pts13C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BMDPJNLG_01735	2.45e-95	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
BMDPJNLG_01737	4.53e-239	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
BMDPJNLG_01738	0.0	yhaN	-	-	L	-	-	-	AAA domain
BMDPJNLG_01739	6.56e-293	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
BMDPJNLG_01740	8.43e-73	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
BMDPJNLG_01741	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
BMDPJNLG_01742	2.09e-208	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
BMDPJNLG_01743	0.0	pps	2.7.9.2	-	H	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
BMDPJNLG_01744	1.49e-13	-	-	-	G	-	-	-	Phosphoglycerate mutase family
BMDPJNLG_01745	1.91e-102	-	-	-	G	-	-	-	Phosphoglycerate mutase family
BMDPJNLG_01746	9.44e-183	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
BMDPJNLG_01747	0.0	-	-	-	S	-	-	-	Putative threonine/serine exporter
BMDPJNLG_01749	1.13e-45	-	-	-	-	-	-	-	-
BMDPJNLG_01750	7.7e-21	-	-	-	-	-	-	-	-
BMDPJNLG_01751	1.85e-115	ybaK	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BMDPJNLG_01752	1.38e-223	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
BMDPJNLG_01753	6.77e-49	-	-	-	-	-	-	-	-
BMDPJNLG_01754	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BMDPJNLG_01755	1.8e-99	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
BMDPJNLG_01756	2.03e-310	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
BMDPJNLG_01757	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
BMDPJNLG_01759	8.44e-174	-	-	-	EGP	-	-	-	Major Facilitator
BMDPJNLG_01760	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
BMDPJNLG_01761	5.3e-137	vanZ	-	-	V	-	-	-	VanZ like family
BMDPJNLG_01762	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
BMDPJNLG_01763	0.0	yclK	-	-	T	-	-	-	Histidine kinase
BMDPJNLG_01764	4.96e-167	-	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
BMDPJNLG_01765	9.01e-90	-	-	-	S	-	-	-	SdpI/YhfL protein family
BMDPJNLG_01766	1.93e-242	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
BMDPJNLG_01767	1.72e-288	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
BMDPJNLG_01768	1.72e-127	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
BMDPJNLG_01770	1e-22	-	-	-	S	-	-	-	Domain of Unknown Function with PDB structure (DUF3850)
BMDPJNLG_01771	2.15e-194	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
BMDPJNLG_01772	9.93e-72	crcB1	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BMDPJNLG_01773	2.95e-84	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BMDPJNLG_01774	1.31e-16	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
BMDPJNLG_01775	3.03e-145	ybgF	-	-	E	ko:K02205,ko:K03293,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
BMDPJNLG_01776	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
BMDPJNLG_01777	9.58e-122	-	-	-	C	-	-	-	Pyridoxamine 5'-phosphate oxidase
BMDPJNLG_01778	0.0	-	-	-	E	-	-	-	Amino acid permease
BMDPJNLG_01779	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
BMDPJNLG_01780	1.43e-310	ynbB	-	-	P	-	-	-	aluminum resistance
BMDPJNLG_01781	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
BMDPJNLG_01809	1.72e-286	-	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyl transferase 4-like domain
BMDPJNLG_01810	3.68e-256	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
BMDPJNLG_01811	5.35e-224	mprF	-	-	S	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
BMDPJNLG_01812	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
BMDPJNLG_01813	1.3e-40	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
BMDPJNLG_01814	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
BMDPJNLG_01815	1.58e-101	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
BMDPJNLG_01816	1.47e-66	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain
BMDPJNLG_01817	3.43e-192	yhaH	-	-	S	-	-	-	Protein of unknown function (DUF805)
BMDPJNLG_01818	2.89e-173	glnQ	-	-	E	ko:K17076	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
BMDPJNLG_01819	0.0	XK27_05795	-	-	P	ko:K17073,ko:K17074	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
BMDPJNLG_01820	1.41e-155	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
BMDPJNLG_01821	1.54e-84	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
BMDPJNLG_01822	9.4e-164	terC	-	-	P	-	-	-	Integral membrane protein TerC family
BMDPJNLG_01823	1.77e-119	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	6-O-methylguanine DNA methyltransferase, DNA binding domain
BMDPJNLG_01824	2.81e-166	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
BMDPJNLG_01825	5.61e-113	-	-	-	-	-	-	-	-
BMDPJNLG_01826	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BMDPJNLG_01827	3.55e-232	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
BMDPJNLG_01828	2.51e-190	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BMDPJNLG_01829	3.21e-187	-	-	-	S	-	-	-	Protein of unknown function (DUF1002)
BMDPJNLG_01830	1.16e-192	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
BMDPJNLG_01833	1.72e-285	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BMDPJNLG_01834	5.03e-313	mdr	-	-	EGP	-	-	-	Major Facilitator
BMDPJNLG_01835	0.0	pts32BC	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
BMDPJNLG_01836	1.54e-194	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
BMDPJNLG_01837	7.56e-225	ybbE	3.4.16.4	-	V	ko:K21469	ko00550,map00550	ko00000,ko00001,ko01000,ko01002,ko01011	Beta-lactamase
BMDPJNLG_01838	5.06e-237	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
BMDPJNLG_01839	3.22e-185	-	-	-	K	-	-	-	rpiR family
BMDPJNLG_01840	1.29e-27	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
BMDPJNLG_01841	2.14e-103	-	-	-	-	-	-	-	-
BMDPJNLG_01843	6.45e-93	-	-	-	K	-	-	-	LytTr DNA-binding domain
BMDPJNLG_01844	1.48e-119	-	-	-	S	-	-	-	membrane
BMDPJNLG_01845	2.61e-23	-	-	-	-	-	-	-	-
BMDPJNLG_01846	7.9e-255	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
BMDPJNLG_01847	9.18e-202	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
BMDPJNLG_01848	1.58e-154	-	-	-	-	-	-	-	-
BMDPJNLG_01849	1.45e-183	XK27_08125	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
BMDPJNLG_01850	2.31e-179	-	-	-	S	ko:K06889	-	ko00000	Alpha/beta hydrolase family
BMDPJNLG_01851	1.93e-143	-	-	-	G	-	-	-	phosphoglycerate mutase
BMDPJNLG_01852	6.91e-118	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
BMDPJNLG_01853	1.05e-233	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
BMDPJNLG_01854	2.12e-132	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
BMDPJNLG_01855	0.0	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
BMDPJNLG_01856	4.13e-38	-	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
BMDPJNLG_01858	2.23e-189	-	-	-	S	-	-	-	Putative ABC-transporter type IV
BMDPJNLG_01860	4.11e-124	potE	-	-	E	-	-	-	thought to be involved in transport amino acids across the membrane
BMDPJNLG_01862	2.67e-35	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
BMDPJNLG_01863	6.66e-27	-	-	-	S	-	-	-	CAAX protease self-immunity
BMDPJNLG_01865	1.25e-94	-	-	-	K	-	-	-	Helix-turn-helix domain
BMDPJNLG_01866	4.48e-129	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
BMDPJNLG_01867	1.64e-65	-	-	-	-	-	-	-	-
BMDPJNLG_01868	7.58e-291	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
BMDPJNLG_01869	6.85e-255	flp	-	-	V	-	-	-	Beta-lactamase
BMDPJNLG_01870	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BMDPJNLG_01871	1.42e-122	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
BMDPJNLG_01876	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
BMDPJNLG_01877	1.46e-117	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
BMDPJNLG_01878	0.0	-	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
BMDPJNLG_01879	5.55e-80	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
BMDPJNLG_01880	1.59e-172	znuB	-	-	U	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
BMDPJNLG_01881	1.63e-152	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
BMDPJNLG_01882	2.96e-210	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
BMDPJNLG_01883	4.47e-56	-	-	-	K	ko:K21903	-	ko00000,ko03000	helix_turn_helix, Arsenical Resistance Operon Repressor
BMDPJNLG_01884	0.0	fruA	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase System
BMDPJNLG_01885	2.18e-215	pfkB	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family. LacC subfamily
BMDPJNLG_01886	3.14e-175	fruR	-	-	K	ko:K03436	-	ko00000,ko03000	DeoR C terminal sensor domain
BMDPJNLG_01887	6.39e-279	natB	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
BMDPJNLG_01888	3.09e-212	natA	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
BMDPJNLG_01889	3.41e-88	-	-	-	-	-	-	-	-
BMDPJNLG_01890	2.52e-32	-	-	-	-	-	-	-	-
BMDPJNLG_01891	6.32e-42	-	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
BMDPJNLG_01892	4.74e-107	-	-	-	-	-	-	-	-
BMDPJNLG_01893	7.87e-30	-	-	-	-	-	-	-	-
BMDPJNLG_01897	5.02e-180	blpT	-	-	-	-	-	-	-
BMDPJNLG_01898	7.86e-138	mesE	-	-	M	ko:K12293,ko:K20345	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko02000	Transport protein ComB
BMDPJNLG_01899	0.0	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
BMDPJNLG_01900	2.08e-164	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
BMDPJNLG_01901	7.34e-178	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
BMDPJNLG_01902	1.89e-23	-	-	-	-	-	-	-	-
BMDPJNLG_01903	0.0	-	-	-	S	ko:K06921	-	ko00000	Archaea bacterial proteins of unknown function
BMDPJNLG_01904	0.0	agl	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
BMDPJNLG_01905	0.0	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
BMDPJNLG_01906	4.48e-34	-	-	-	-	-	-	-	-
BMDPJNLG_01907	1.07e-35	-	-	-	-	-	-	-	-
BMDPJNLG_01908	1.95e-45	-	-	-	-	-	-	-	-
BMDPJNLG_01909	6.94e-70	-	-	-	S	-	-	-	Enterocin A Immunity
BMDPJNLG_01910	7.79e-186	racD	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
BMDPJNLG_01911	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BMDPJNLG_01912	9.28e-271	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
BMDPJNLG_01913	8.32e-157	vanR	-	-	K	-	-	-	response regulator
BMDPJNLG_01914	0.0	ndvA	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
BMDPJNLG_01915	9.66e-179	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter, ATP-binding protein
BMDPJNLG_01916	1.22e-190	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter, ATP-binding protein
BMDPJNLG_01917	3.93e-176	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
BMDPJNLG_01918	6.88e-257	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
BMDPJNLG_01919	4.49e-59	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
BMDPJNLG_01920	4.28e-197	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
BMDPJNLG_01921	4.99e-178	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
BMDPJNLG_01922	6.84e-190	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
BMDPJNLG_01923	3.66e-166	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
BMDPJNLG_01924	2.99e-75	cvpA	-	-	S	-	-	-	Colicin V production protein
BMDPJNLG_01926	5.24e-230	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
BMDPJNLG_01927	9.48e-194	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
BMDPJNLG_01928	2.58e-126	azr	1.5.1.36	-	S	ko:K22394	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
BMDPJNLG_01929	3.41e-125	azo1	1.5.1.36, 1.7.1.6	-	S	ko:K03206,ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
BMDPJNLG_01930	7.51e-145	-	-	-	K	-	-	-	WHG domain
BMDPJNLG_01931	3.66e-43	-	-	-	-	-	-	-	-
BMDPJNLG_01932	8.17e-177	-	-	-	L	-	-	-	COG3385 FOG Transposase and inactivated derivatives
BMDPJNLG_01934	4.2e-192	-	-	-	S	-	-	-	COG0433 Predicted ATPase
BMDPJNLG_01938	1.64e-98	-	-	-	U	ko:K03205	ko03070,map03070	ko00000,ko00001,ko00002,ko02044	TraM recognition site of TraD and TraG
BMDPJNLG_01939	4.47e-26	-	-	-	-	-	-	-	-
BMDPJNLG_01941	1.59e-59	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
BMDPJNLG_01942	2.28e-97	-	-	-	-	-	-	-	-
BMDPJNLG_01943	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BMDPJNLG_01944	1.31e-215	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
BMDPJNLG_01945	0.0	dnaB2	-	-	L	ko:K03346	-	ko00000,ko03032	Replication initiation and membrane attachment
BMDPJNLG_01946	3.04e-105	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BMDPJNLG_01947	2.16e-136	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BMDPJNLG_01948	2.24e-198	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
BMDPJNLG_01949	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BMDPJNLG_01950	1.05e-40	-	-	-	-	-	-	-	-
BMDPJNLG_01951	1.46e-125	-	-	-	L	-	-	-	Bifunctional protein
BMDPJNLG_01952	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
BMDPJNLG_01953	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
BMDPJNLG_01954	1.77e-157	ypgQ	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
BMDPJNLG_01955	0.0	pepC2	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
BMDPJNLG_01957	9.39e-71	-	-	-	-	-	-	-	-
BMDPJNLG_01958	7.03e-307	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BMDPJNLG_01959	0.0	-	-	-	S	-	-	-	Fibronectin type III domain
BMDPJNLG_01960	1.28e-292	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
BMDPJNLG_01961	8.73e-187	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
BMDPJNLG_01962	9.01e-287	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
BMDPJNLG_01963	3.87e-80	yneE	-	-	K	-	-	-	Transcriptional regulator
BMDPJNLG_01964	2.18e-122	yneE	-	-	K	-	-	-	Transcriptional regulator
BMDPJNLG_01965	3.58e-61	-	-	-	S	ko:K07124	-	ko00000	Enoyl-(Acyl carrier protein) reductase
BMDPJNLG_01966	5.05e-11	-	-	-	-	-	-	-	-
BMDPJNLG_01967	3.69e-54	-	-	-	L	ko:K07473	-	ko00000,ko02048	Addiction module antitoxin, RelB DinJ family
BMDPJNLG_01968	2.29e-162	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
BMDPJNLG_01969	8.06e-110	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
BMDPJNLG_01970	3.31e-154	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
BMDPJNLG_01971	1.65e-72	-	-	-	-	-	-	-	-
BMDPJNLG_01972	2.52e-52	-	-	-	-	-	-	-	-
BMDPJNLG_01973	5.7e-209	-	-	-	EG	-	-	-	EamA-like transporter family
BMDPJNLG_01974	6.7e-211	-	-	-	EG	-	-	-	EamA-like transporter family
BMDPJNLG_01975	1.28e-106	yicL	-	-	EG	-	-	-	EamA-like transporter family
BMDPJNLG_01976	7.81e-107	-	-	-	-	-	-	-	-
BMDPJNLG_01977	1.06e-141	-	-	-	-	-	-	-	-
BMDPJNLG_01978	2.9e-19	-	-	-	S	-	-	-	DUF218 domain
BMDPJNLG_01979	2.39e-182	-	-	-	S	-	-	-	DUF218 domain
BMDPJNLG_01980	0.0	yheS_2	-	-	S	ko:K18231,ko:K19349	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ATPases associated with a variety of cellular activities
BMDPJNLG_01981	8.23e-112	-	-	-	-	-	-	-	-
BMDPJNLG_01982	1.09e-74	-	-	-	-	-	-	-	-
BMDPJNLG_01983	7.26e-35	-	-	-	S	-	-	-	Protein conserved in bacteria
BMDPJNLG_01984	2.27e-71	-	-	-	S	-	-	-	protein encoded in hypervariable junctions of pilus gene clusters
BMDPJNLG_01985	3.47e-49	yfhC	-	-	C	-	-	-	nitroreductase
BMDPJNLG_01986	9.43e-47	yfhC	-	-	C	-	-	-	nitroreductase
BMDPJNLG_01987	1.22e-174	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
BMDPJNLG_01988	0.0	pbg6	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
BMDPJNLG_01989	1.8e-284	pts23C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BMDPJNLG_01990	9.5e-153	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA
BMDPJNLG_01991	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
BMDPJNLG_01992	4.04e-94	-	-	-	S	-	-	-	Domain of unknown function (DUF3284)
BMDPJNLG_01993	0.0	celD	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BMDPJNLG_01994	2.92e-79	-	-	-	-	-	-	-	-
BMDPJNLG_01995	8.72e-111	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
BMDPJNLG_01996	4.26e-165	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
BMDPJNLG_01997	8.75e-200	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BMDPJNLG_01998	1.4e-80	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
BMDPJNLG_01999	1.14e-196	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
BMDPJNLG_02000	7.55e-69	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
BMDPJNLG_02001	1.29e-143	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BMDPJNLG_02002	1.18e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2508)
BMDPJNLG_02003	3.08e-140	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
BMDPJNLG_02004	1.55e-68	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
BMDPJNLG_02005	1.15e-47	-	-	-	M	-	-	-	lipopolysaccharide 3-alpha-galactosyltransferase activity
BMDPJNLG_02006	1.12e-136	-	-	-	M	-	-	-	family 8
BMDPJNLG_02007	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BMDPJNLG_02008	3.03e-110	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
BMDPJNLG_02009	6.12e-177	lysR5	-	-	K	-	-	-	LysR substrate binding domain
BMDPJNLG_02010	2.06e-298	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
BMDPJNLG_02011	5.39e-84	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BMDPJNLG_02012	2.01e-135	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
BMDPJNLG_02013	1.76e-122	citX	2.7.7.61	-	HI	ko:K05964	ko02020,map02020	ko00000,ko00001,ko01000	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
BMDPJNLG_02014	2.53e-286	-	-	-	S	-	-	-	Sterol carrier protein domain
BMDPJNLG_02015	4.04e-29	-	-	-	-	-	-	-	-
BMDPJNLG_02016	6.93e-140	-	-	-	K	-	-	-	LysR substrate binding domain
BMDPJNLG_02017	1.13e-126	-	-	-	-	-	-	-	-
BMDPJNLG_02018	5.04e-154	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
BMDPJNLG_02019	1.81e-151	-	-	-	-	-	-	-	-
BMDPJNLG_02020	3.05e-235	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
BMDPJNLG_02021	4.86e-150	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
BMDPJNLG_02022	2.15e-137	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
BMDPJNLG_02023	1.1e-184	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
BMDPJNLG_02024	6.48e-136	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
BMDPJNLG_02025	0.0	sasH	3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45	-	F	ko:K01081,ko:K01119,ko:K07004,ko:K08693,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
BMDPJNLG_02026	9.89e-74	-	-	-	-	-	-	-	-
BMDPJNLG_02027	0.0	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
BMDPJNLG_02028	1.23e-231	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
BMDPJNLG_02029	1.6e-272	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
BMDPJNLG_02030	4.51e-69	-	-	-	-	-	-	-	-
BMDPJNLG_02031	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
BMDPJNLG_02032	2.13e-66	-	-	-	-	-	-	-	-
BMDPJNLG_02033	2.32e-234	-	-	-	S	-	-	-	AAA domain
BMDPJNLG_02034	9.82e-164	gpmA1	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BMDPJNLG_02035	2.42e-33	-	-	-	-	-	-	-	-
BMDPJNLG_02036	8.43e-206	-	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
BMDPJNLG_02037	3.16e-160	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
BMDPJNLG_02038	2.02e-169	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
BMDPJNLG_02039	1.1e-152	-	3.8.1.2	-	S	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
BMDPJNLG_02040	4.57e-135	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
BMDPJNLG_02041	6.11e-66	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
BMDPJNLG_02042	4.4e-86	-	-	-	K	-	-	-	LytTr DNA-binding domain
BMDPJNLG_02043	0.0	-	-	-	E	-	-	-	Amino acid permease
BMDPJNLG_02045	1.14e-99	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
BMDPJNLG_02046	1.96e-110	-	2.7.7.65	-	T	ko:K02488	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko00002,ko01000,ko02022	GGDEF domain
BMDPJNLG_02047	1.06e-45	-	-	-	-	-	-	-	-
BMDPJNLG_02048	3.43e-49	icaA	-	-	M	-	-	-	Glycosyl transferase family group 2
BMDPJNLG_02049	9.63e-81	icaA	-	-	M	-	-	-	Glycosyl transferase family group 2
BMDPJNLG_02050	2.21e-34	-	4.1.2.50, 4.2.3.12	-	H	ko:K01737	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000,ko03016	6-pyruvoyl tetrahydropterin synthase
BMDPJNLG_02051	6.91e-118	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
BMDPJNLG_02052	5.12e-199	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
BMDPJNLG_02053	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
BMDPJNLG_02054	0.0	pts33BCA	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
BMDPJNLG_02055	2.4e-194	bglG5	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
BMDPJNLG_02056	1.25e-262	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
BMDPJNLG_02057	3.07e-112	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BMDPJNLG_02058	2.85e-153	-	-	-	-	-	-	-	-
BMDPJNLG_02059	3.23e-98	copY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Penicillinase repressor
BMDPJNLG_02060	8.04e-190	-	-	-	S	-	-	-	hydrolase
BMDPJNLG_02061	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BMDPJNLG_02062	2.76e-221	ybbR	-	-	S	-	-	-	YbbR-like protein
BMDPJNLG_02063	2.13e-194	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
BMDPJNLG_02064	3.46e-266	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
BMDPJNLG_02065	3.69e-170	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
BMDPJNLG_02066	8.77e-173	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
BMDPJNLG_02067	1.25e-263	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
BMDPJNLG_02068	2.84e-208	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
BMDPJNLG_02069	1.51e-127	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
BMDPJNLG_02070	4.82e-113	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
BMDPJNLG_02071	1.1e-232	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
BMDPJNLG_02072	1.64e-174	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
BMDPJNLG_02073	2.81e-200	ycsE	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
BMDPJNLG_02074	2.53e-123	-	-	-	-	-	-	-	-
BMDPJNLG_02075	1.18e-253	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
BMDPJNLG_02076	5.46e-183	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
BMDPJNLG_02077	2.86e-286	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
BMDPJNLG_02078	2.86e-244	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
BMDPJNLG_02079	9.53e-241	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	Putative sugar-binding domain
BMDPJNLG_02081	0.0	-	-	-	-	-	-	-	-
BMDPJNLG_02082	0.0	ycaM	-	-	E	-	-	-	amino acid
BMDPJNLG_02083	1.43e-178	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
BMDPJNLG_02084	7.65e-101	-	-	-	K	-	-	-	MerR HTH family regulatory protein
BMDPJNLG_02085	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
BMDPJNLG_02086	4.64e-63	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
BMDPJNLG_02087	4.89e-14	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
BMDPJNLG_02088	2.65e-154	nanA	4.1.3.3	-	EM	ko:K01639	ko00520,map00520	ko00000,ko00001,ko01000	Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
BMDPJNLG_02089	1.03e-112	nanK	-	-	GK	-	-	-	ROK family
BMDPJNLG_02090	3.74e-70	-	-	-	G	-	-	-	Xylose isomerase domain protein TIM barrel
BMDPJNLG_02091	1.48e-166	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
BMDPJNLG_02092	6.48e-279	-	-	-	E	ko:K03307	-	ko00000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BMDPJNLG_02093	1.4e-74	cah	3.1.1.41	-	Q	ko:K01060	ko00311,ko01130,map00311,map01130	ko00000,ko00001,ko01000	Acetyl xylan esterase (AXE1)
BMDPJNLG_02094	4.42e-45	cah	3.1.1.41	-	Q	ko:K01060	ko00311,ko01130,map00311,map01130	ko00000,ko00001,ko01000	Acetyl xylan esterase (AXE1)
BMDPJNLG_02095	6.9e-141	nanE	5.1.3.9	-	G	ko:K01788	ko00520,map00520	ko00000,ko00001,ko01000	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
BMDPJNLG_02096	2.58e-13	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BMDPJNLG_02097	1.59e-108	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BMDPJNLG_02098	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
BMDPJNLG_02099	1.28e-228	pepR	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
BMDPJNLG_02100	1.75e-168	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
BMDPJNLG_02101	2.37e-242	-	-	-	T	-	-	-	GHKL domain
BMDPJNLG_02102	5.81e-98	ykoJ	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
BMDPJNLG_02103	5.59e-109	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
BMDPJNLG_02104	8e-108	XK27_03150	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
BMDPJNLG_02105	8.64e-85	yybA	-	-	K	-	-	-	Transcriptional regulator
BMDPJNLG_02106	2.91e-83	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter transmembrane region
BMDPJNLG_02107	1.13e-201	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter transmembrane region
BMDPJNLG_02108	8.74e-146	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
BMDPJNLG_02109	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
BMDPJNLG_02110	0.0	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
BMDPJNLG_02111	8.98e-214	frc	2.8.3.16	-	C	ko:K07749	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
BMDPJNLG_02112	2.44e-64	bbsF_1	2.8.3.19	-	C	ko:K18702	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
BMDPJNLG_02113	1.42e-247	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BMDPJNLG_02114	4.59e-124	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
BMDPJNLG_02115	1.83e-171	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
BMDPJNLG_02116	6.43e-143	-	-	-	S	-	-	-	Fic/DOC family
BMDPJNLG_02117	1.72e-22	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
BMDPJNLG_02118	1.02e-34	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.87
BMDPJNLG_02127	2.84e-108	-	-	-	K	-	-	-	FR47-like protein
BMDPJNLG_02128	1.33e-130	-	-	-	M	-	-	-	LysM domain protein
BMDPJNLG_02129	5.68e-211	-	-	-	D	-	-	-	nuclear chromosome segregation
BMDPJNLG_02130	8.92e-136	-	-	-	G	-	-	-	Phosphoglycerate mutase family
BMDPJNLG_02131	9.01e-115	-	-	-	G	-	-	-	Histidine phosphatase superfamily (branch 1)
BMDPJNLG_02132	1.9e-153	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
BMDPJNLG_02133	2.67e-148	glpQ1	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
BMDPJNLG_02135	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
BMDPJNLG_02136	1.48e-210	lacR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
BMDPJNLG_02137	0.0	lacL	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
BMDPJNLG_02138	4.61e-180	lacM	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
BMDPJNLG_02139	2.84e-240	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
BMDPJNLG_02140	9.54e-208	-	-	-	S	-	-	-	Nucleotidyl transferase AbiEii toxin, Type IV TA system
BMDPJNLG_02141	5.55e-137	-	-	-	K	-	-	-	Transcriptional regulator, AbiEi antitoxin
BMDPJNLG_02142	4.05e-242	-	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding protein-like domain
BMDPJNLG_02143	9.23e-106	-	-	-	L	-	-	-	PFAM Transposase DDE domain
BMDPJNLG_02145	1.28e-311	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
BMDPJNLG_02146	5.51e-46	-	-	-	S	-	-	-	Transposase C of IS166 homeodomain
BMDPJNLG_02147	4.01e-84	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
BMDPJNLG_02148	9.48e-31	-	-	-	-	-	-	-	-
BMDPJNLG_02149	1.62e-77	-	-	-	M	-	-	-	Rib/alpha-like repeat
BMDPJNLG_02150	3.86e-145	-	-	-	M	-	-	-	Rib/alpha-like repeat
BMDPJNLG_02151	2.97e-110	-	-	-	-	-	-	-	-
BMDPJNLG_02152	9.67e-33	-	-	-	S	-	-	-	Domain of unknown function DUF1829
BMDPJNLG_02153	0.0	-	-	-	-	-	-	-	-
BMDPJNLG_02154	5.74e-96	eda	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	KDPG and KHG aldolase
BMDPJNLG_02155	1.09e-196	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
BMDPJNLG_02156	1.2e-41	-	-	-	-	-	-	-	-
BMDPJNLG_02157	1.61e-101	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
BMDPJNLG_02158	1.05e-173	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
BMDPJNLG_02159	5.7e-282	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
BMDPJNLG_02160	2.16e-163	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
BMDPJNLG_02161	1.08e-265	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
BMDPJNLG_02162	1.34e-191	oppB	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BMDPJNLG_02163	6.71e-241	oppC	-	-	EP	ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BMDPJNLG_02164	6.08e-253	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
BMDPJNLG_02165	6.54e-222	oppF	-	-	P	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
BMDPJNLG_02166	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
BMDPJNLG_02167	8.35e-94	hsp	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
BMDPJNLG_02168	2.02e-38	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
BMDPJNLG_02169	8.49e-146	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
BMDPJNLG_02170	1.13e-41	-	-	-	M	-	-	-	Lysin motif
BMDPJNLG_02171	5.6e-148	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
BMDPJNLG_02172	1.4e-281	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
BMDPJNLG_02173	1.34e-314	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
BMDPJNLG_02174	8.21e-57	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
BMDPJNLG_02175	7.11e-293	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
BMDPJNLG_02176	2e-299	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BMDPJNLG_02177	1.01e-255	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
BMDPJNLG_02178	1.99e-87	srlB	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
BMDPJNLG_02179	2.19e-270	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
BMDPJNLG_02180	2.48e-135	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
BMDPJNLG_02181	3.12e-91	-	-	-	S	-	-	-	Protein of unknown function (DUF1149)
BMDPJNLG_02182	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
BMDPJNLG_02183	1.47e-284	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
BMDPJNLG_02184	5.49e-301	ymfH	-	-	S	-	-	-	Peptidase M16
BMDPJNLG_02185	1.39e-171	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
BMDPJNLG_02186	2.13e-152	ymfM	-	-	S	ko:K15539	-	ko00000	Helix-turn-helix domain
BMDPJNLG_02187	3.92e-123	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BMDPJNLG_02188	1.17e-248	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
BMDPJNLG_02189	3.03e-293	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
BMDPJNLG_02190	1.94e-268	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	transferase
BMDPJNLG_02191	5.04e-154	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
BMDPJNLG_02192	2.68e-314	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
BMDPJNLG_02193	9.44e-169	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
BMDPJNLG_02194	1.55e-122	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BMDPJNLG_02195	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
BMDPJNLG_02196	2.24e-238	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BMDPJNLG_02197	8.33e-27	-	-	-	-	-	-	-	-
BMDPJNLG_02198	3.54e-230	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
BMDPJNLG_02199	4.04e-203	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
BMDPJNLG_02200	3.31e-239	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
BMDPJNLG_02201	3.42e-232	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
BMDPJNLG_02202	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
BMDPJNLG_02203	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
BMDPJNLG_02204	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
BMDPJNLG_02205	1.55e-117	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
BMDPJNLG_02206	2.44e-211	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
BMDPJNLG_02207	2.78e-251	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
BMDPJNLG_02208	8.59e-221	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
BMDPJNLG_02209	1.16e-128	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
BMDPJNLG_02210	0.0	-	-	-	S	-	-	-	SH3-like domain
BMDPJNLG_02211	3.16e-144	ybbL	-	-	S	ko:K02068	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
BMDPJNLG_02212	4.76e-168	ybbM	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
BMDPJNLG_02213	7e-74	mutS1	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
BMDPJNLG_02214	1.22e-277	mutS1	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
BMDPJNLG_02215	1.24e-258	xerS	-	-	L	ko:K03733	-	ko00000,ko03036	Belongs to the 'phage' integrase family
BMDPJNLG_02216	3.03e-90	-	-	-	-	-	-	-	-
BMDPJNLG_02217	4.36e-142	XK27_00160	-	-	S	-	-	-	Domain of unknown function (DUF5052)
BMDPJNLG_02218	4.08e-270	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
BMDPJNLG_02219	7.55e-53	-	-	-	S	-	-	-	Transglycosylase associated protein
BMDPJNLG_02220	1.95e-107	potC3	-	-	E	ko:K02053	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
BMDPJNLG_02221	9.95e-37	potA11	3.6.3.30	-	P	ko:K02010,ko:K02052	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
BMDPJNLG_02222	2.95e-107	potA11	3.6.3.30	-	P	ko:K02010,ko:K02052	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
BMDPJNLG_02223	1.73e-195	-	-	-	P	ko:K02055	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
BMDPJNLG_02224	8.09e-316	ade	3.5.4.2	-	F	ko:K01486	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	Adenine deaminase C-terminal domain
BMDPJNLG_02226	1.18e-95	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	domain protein
BMDPJNLG_02227	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
BMDPJNLG_02228	3.56e-281	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
BMDPJNLG_02229	0.0	lacZ	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	-beta-galactosidase
BMDPJNLG_02230	7.28e-299	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
BMDPJNLG_02231	2.17e-81	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
BMDPJNLG_02232	3.87e-46	sagD	-	-	S	-	-	-	YcaO cyclodehydratase, ATP-ad Mg2+-binding
BMDPJNLG_02233	1.44e-62	-	-	-	S	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
BMDPJNLG_02234	1.64e-169	adh2	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
BMDPJNLG_02235	1.17e-87	-	-	-	GM	-	-	-	NAD(P)H-binding
BMDPJNLG_02236	1.59e-44	-	-	-	S	-	-	-	Domain of unknown function (DUF4440)
BMDPJNLG_02237	3.49e-113	-	-	-	K	-	-	-	LysR substrate binding domain
BMDPJNLG_02239	2.25e-57	-	-	-	K	-	-	-	Tetracycline repressor, C-terminal all-alpha domain
BMDPJNLG_02240	5.94e-100	-	-	-	S	ko:K06889	-	ko00000	X-Pro dipeptidyl-peptidase (S15 family)
BMDPJNLG_02244	4.06e-132	-	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
BMDPJNLG_02245	8.32e-171	-	-	-	-	-	-	-	-
BMDPJNLG_02246	3.18e-126	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
BMDPJNLG_02247	7.4e-188	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
BMDPJNLG_02248	2.96e-23	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
BMDPJNLG_02249	3.09e-71	-	-	-	-	-	-	-	-
BMDPJNLG_02255	8.2e-07	-	-	-	-	-	-	-	-
BMDPJNLG_02257	3.71e-154	-	-	-	S	-	-	-	Baseplate J-like protein
BMDPJNLG_02258	2.37e-43	-	-	-	-	-	-	-	-
BMDPJNLG_02259	4.6e-63	-	-	-	-	-	-	-	-
BMDPJNLG_02260	7.33e-218	fba	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-1,6-bisphosphate aldolase, class II
BMDPJNLG_02261	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
BMDPJNLG_02262	5.86e-131	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
BMDPJNLG_02263	4.63e-192	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BMDPJNLG_02264	2.71e-297	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
BMDPJNLG_02266	3.04e-53	-	-	-	C	-	-	-	FMN_bind
BMDPJNLG_02267	3.85e-109	-	-	-	-	-	-	-	-
BMDPJNLG_02268	7.39e-225	iunH	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	inosine-uridine preferring nucleoside hydrolase
BMDPJNLG_02269	2.49e-117	alkD	-	-	L	-	-	-	DNA alkylation repair enzyme
BMDPJNLG_02270	0.0	pbg4	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
BMDPJNLG_02271	1.33e-165	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA domain
BMDPJNLG_02272	1.32e-74	pts20B	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
BMDPJNLG_02273	4.56e-78	celC	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose Cellobiose specific IIA subunit
BMDPJNLG_02274	2.72e-15	-	-	-	-	-	-	-	-
BMDPJNLG_02275	1.71e-150	-	-	-	S	-	-	-	Peptidase family M23
BMDPJNLG_02276	1.74e-136	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BMDPJNLG_02277	7.99e-87	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
BMDPJNLG_02283	4.26e-108	-	-	-	M	-	-	-	NlpC/P60 family
BMDPJNLG_02284	6.16e-168	cobQ	-	-	S	ko:K07009	-	ko00000	glutamine amidotransferase
BMDPJNLG_02285	6.69e-84	-	-	-	L	-	-	-	RelB antitoxin
BMDPJNLG_02286	4.91e-253	-	-	-	V	-	-	-	ABC transporter transmembrane region
BMDPJNLG_02287	5.19e-248	-	-	-	G	-	-	-	Transmembrane secretion effector
BMDPJNLG_02288	1.1e-128	-	-	-	E	ko:K02054	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
BMDPJNLG_02289	2.5e-122	rihC	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
BMDPJNLG_02290	1.07e-93	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BMDPJNLG_02291	9.64e-38	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
BMDPJNLG_02292	8.69e-76	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
BMDPJNLG_02293	1.52e-193	add	3.5.4.2, 3.5.4.4	-	F	ko:K01488,ko:K02029,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BMDPJNLG_02294	5.81e-253	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
BMDPJNLG_02295	6.85e-109	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
BMDPJNLG_02296	5.03e-256	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
BMDPJNLG_02297	1.77e-157	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BMDPJNLG_02298	9.22e-141	yqeK	-	-	H	-	-	-	Hydrolase, HD family
BMDPJNLG_02299	5.09e-78	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
BMDPJNLG_02300	8.01e-276	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
BMDPJNLG_02301	2.19e-125	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
BMDPJNLG_02302	3.52e-163	csrR	-	-	K	-	-	-	response regulator
BMDPJNLG_02303	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
BMDPJNLG_02304	2.19e-18	-	-	-	-	-	-	-	-
BMDPJNLG_02305	4.28e-125	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
BMDPJNLG_02306	2.95e-283	-	-	-	S	-	-	-	SLAP domain
BMDPJNLG_02307	3.23e-108	-	-	-	S	ko:K19055	-	ko00000,ko01000,ko03016	Aminoacyl-tRNA editing domain
BMDPJNLG_02308	2.43e-216	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
BMDPJNLG_02309	1.32e-57	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
BMDPJNLG_02310	1.37e-173	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BMDPJNLG_02311	3.71e-76	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
BMDPJNLG_02313	2.02e-97	glnP9	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter, permease protein
BMDPJNLG_02314	1.68e-149	glnP7	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter permease
BMDPJNLG_02315	4.57e-163	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
BMDPJNLG_02316	3.72e-202	cjaA	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
BMDPJNLG_02317	2.9e-254	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BMDPJNLG_02318	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
BMDPJNLG_02319	2.55e-94	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
BMDPJNLG_02320	6.74e-214	ldh3	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	lactate/malate dehydrogenase, alpha/beta C-terminal domain
BMDPJNLG_02321	3.55e-182	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
BMDPJNLG_02322	1.8e-34	-	-	-	-	-	-	-	-
BMDPJNLG_02323	0.0	sufI	-	-	Q	-	-	-	Multicopper oxidase
BMDPJNLG_02324	1.76e-193	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
BMDPJNLG_02325	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
BMDPJNLG_02326	1.43e-294	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
BMDPJNLG_02327	2.89e-312	-	-	-	S	ko:K12941	-	ko00000,ko01002	Peptidase dimerisation domain
BMDPJNLG_02328	1.3e-175	-	-	-	S	-	-	-	Protein of unknown function (DUF3100)
BMDPJNLG_02329	2.04e-60	-	-	-	S	-	-	-	An automated process has identified a potential problem with this gene model
BMDPJNLG_02330	4.34e-64	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
BMDPJNLG_02331	1.51e-163	-	-	-	S	-	-	-	SLAP domain