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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
AMFGONCA_00002	4.26e-108	-	-	-	M	-	-	-	NlpC/P60 family
AMFGONCA_00003	6.16e-168	cobQ	-	-	S	ko:K07009	-	ko00000	glutamine amidotransferase
AMFGONCA_00004	6.69e-84	-	-	-	L	-	-	-	RelB antitoxin
AMFGONCA_00005	4.91e-253	-	-	-	V	-	-	-	ABC transporter transmembrane region
AMFGONCA_00006	5.19e-248	-	-	-	G	-	-	-	Transmembrane secretion effector
AMFGONCA_00007	7.01e-160	aapA	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
AMFGONCA_00008	2.87e-126	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMFGONCA_00009	1.01e-33	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AMFGONCA_00010	5.34e-77	tnpR1	-	-	L	-	-	-	Resolvase, N terminal domain
AMFGONCA_00011	1.15e-121	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AMFGONCA_00012	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
AMFGONCA_00013	7e-131	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
AMFGONCA_00014	9.71e-47	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
AMFGONCA_00015	5.3e-32	-	-	-	-	-	-	-	-
AMFGONCA_00016	4.51e-60	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
AMFGONCA_00017	3.61e-85	-	-	-	L	-	-	-	DDE superfamily endonuclease
AMFGONCA_00018	4.71e-239	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase, type I
AMFGONCA_00019	8.28e-176	-	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
AMFGONCA_00020	0.0	malH	3.2.1.122	GH4	G	ko:K01232	ko00500,map00500	ko00000,ko00001,ko01000	Family 4 glycosyl hydrolase C-terminal domain
AMFGONCA_00021	8.75e-197	-	-	-	-	-	-	-	-
AMFGONCA_00022	1.69e-94	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
AMFGONCA_00024	1.41e-97	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
AMFGONCA_00025	1.47e-70	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
AMFGONCA_00026	5.38e-184	-	-	-	K	-	-	-	LysR substrate binding domain
AMFGONCA_00027	5.53e-203	pct	2.8.3.1	-	I	ko:K01026	ko00620,ko00640,ko00643,ko01100,ko01120,map00620,map00640,map00643,map01100,map01120	ko00000,ko00001,ko01000	Coenzyme A transferase
AMFGONCA_00028	8.45e-102	pct	2.8.3.1	-	I	ko:K01026	ko00620,ko00640,ko00643,ko01100,ko01120,map00620,map00640,map00643,map01100,map01120	ko00000,ko00001,ko01000	Coenzyme A transferase
AMFGONCA_00029	2.5e-136	fabK	1.3.1.9	-	S	ko:K02371	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Nitronate monooxygenase
AMFGONCA_00030	4.78e-261	-	-	-	S	-	-	-	Domain of unknown function (DUF389)
AMFGONCA_00031	2.82e-125	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMFGONCA_00032	6.49e-137	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMFGONCA_00035	8.95e-70	-	-	-	K	-	-	-	LytTr DNA-binding domain
AMFGONCA_00036	9.29e-51	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
AMFGONCA_00037	1.08e-217	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
AMFGONCA_00038	2.25e-30	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	domain protein
AMFGONCA_00039	2.8e-25	-	-	-	V	ko:K01990,ko:K01992	-	ko00000,ko00002,ko02000	Transport permease protein
AMFGONCA_00040	9.75e-80	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
AMFGONCA_00042	3.5e-280	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
AMFGONCA_00043	4.04e-36	-	-	-	-	-	-	-	-
AMFGONCA_00044	1.33e-72	-	-	-	-	-	-	-	-
AMFGONCA_00045	1.74e-185	-	-	-	S	-	-	-	Replication initiation factor
AMFGONCA_00046	2.67e-180	-	-	-	D	-	-	-	Ftsk spoiiie family protein
AMFGONCA_00047	1.45e-59	-	-	-	-	-	-	-	-
AMFGONCA_00048	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
AMFGONCA_00049	6.55e-97	-	-	-	-	-	-	-	-
AMFGONCA_00050	3.75e-48	-	-	-	S	-	-	-	PFAM Archaeal ATPase
AMFGONCA_00052	4.53e-76	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
AMFGONCA_00053	3.61e-60	-	-	-	-	-	-	-	-
AMFGONCA_00054	7.1e-136	ybbB	-	-	S	-	-	-	Protein of unknown function (DUF1211)
AMFGONCA_00055	0.0	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
AMFGONCA_00056	3.46e-32	-	-	-	S	-	-	-	Alpha beta hydrolase
AMFGONCA_00057	1.47e-303	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
AMFGONCA_00058	3.6e-106	-	-	-	C	-	-	-	Flavodoxin
AMFGONCA_00059	0.0	uvrA2	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC, A subunit
AMFGONCA_00060	2.25e-241	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
AMFGONCA_00061	4.34e-166	-	-	-	S	-	-	-	Peptidase family M23
AMFGONCA_00062	5.37e-106	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
AMFGONCA_00063	2.8e-159	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
AMFGONCA_00064	4.7e-195	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AMFGONCA_00065	2.86e-307	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
AMFGONCA_00066	1.25e-80	lexA	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator, GntR family
AMFGONCA_00067	5.4e-161	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
AMFGONCA_00068	1.65e-180	-	-	-	-	-	-	-	-
AMFGONCA_00069	8.48e-175	-	-	-	-	-	-	-	-
AMFGONCA_00070	1.91e-107	-	-	-	-	-	-	-	-
AMFGONCA_00071	3.49e-36	-	-	-	-	-	-	-	-
AMFGONCA_00072	1.27e-133	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
AMFGONCA_00073	4.01e-184	-	-	-	-	-	-	-	-
AMFGONCA_00074	4.4e-215	-	-	-	-	-	-	-	-
AMFGONCA_00075	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
AMFGONCA_00076	1.28e-150	-	3.1.3.102, 3.1.3.104, 3.1.3.23	-	G	ko:K07757,ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sucrose-6F-phosphate phosphohydrolase
AMFGONCA_00077	4.87e-236	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
AMFGONCA_00078	6.67e-261	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
AMFGONCA_00079	5.87e-228	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
AMFGONCA_00080	2.12e-173	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	GHMP kinases N terminal domain
AMFGONCA_00081	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
AMFGONCA_00082	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
AMFGONCA_00083	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
AMFGONCA_00084	9.62e-116	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
AMFGONCA_00085	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
AMFGONCA_00086	6.91e-149	dnaD	-	-	L	ko:K02086	-	ko00000	DnaD domain protein
AMFGONCA_00087	5.5e-148	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AMFGONCA_00088	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
AMFGONCA_00089	8.47e-152	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
AMFGONCA_00090	1.18e-139	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
AMFGONCA_00091	1.85e-90	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
AMFGONCA_00092	5.87e-278	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
AMFGONCA_00093	6.74e-309	cpdA	-	-	S	-	-	-	Calcineurin-like phosphoesterase
AMFGONCA_00094	9.67e-104	-	-	-	-	-	-	-	-
AMFGONCA_00095	9.46e-159	-	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
AMFGONCA_00096	7.73e-199	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
AMFGONCA_00097	6.51e-69	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
AMFGONCA_00098	5.01e-150	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
AMFGONCA_00099	7.68e-63	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
AMFGONCA_00100	1.43e-309	lctO	1.13.12.4	-	C	ko:K00467,ko:K10530	ko00620,map00620	ko00000,ko00001,ko01000	L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
AMFGONCA_00101	9.39e-195	-	-	-	-	-	-	-	-
AMFGONCA_00103	3.25e-315	-	-	-	M	-	-	-	Glycosyl transferase
AMFGONCA_00104	1.03e-262	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
AMFGONCA_00105	8.66e-85	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMFGONCA_00106	3.46e-18	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMFGONCA_00107	5.66e-16	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMFGONCA_00108	0.0	-	-	-	L	-	-	-	PLD-like domain
AMFGONCA_00109	5.97e-55	-	-	-	S	-	-	-	SnoaL-like domain
AMFGONCA_00110	6.13e-70	-	-	-	K	-	-	-	sequence-specific DNA binding
AMFGONCA_00111	8.71e-31	-	-	-	G	-	-	-	Ribose/Galactose Isomerase
AMFGONCA_00112	5.51e-35	-	-	-	-	-	-	-	-
AMFGONCA_00113	1.42e-184	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
AMFGONCA_00114	2.55e-65	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
AMFGONCA_00115	6.65e-180	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMFGONCA_00116	1.33e-44	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
AMFGONCA_00118	1.29e-41	-	-	-	O	-	-	-	OsmC-like protein
AMFGONCA_00119	2.32e-313	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
AMFGONCA_00120	0.0	-	-	-	L	-	-	-	Plasmid pRiA4b ORF-3-like protein
AMFGONCA_00121	1.28e-226	-	-	-	S	-	-	-	PFAM Archaeal ATPase
AMFGONCA_00122	3.11e-250	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
AMFGONCA_00123	4.95e-164	citG	2.4.2.52	-	H	ko:K05966	ko02020,map02020	ko00000,ko00001,ko01000	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
AMFGONCA_00124	6.31e-84	-	-	-	-	-	-	-	-
AMFGONCA_00125	5.12e-69	-	-	-	-	-	-	-	-
AMFGONCA_00127	2.97e-163	-	-	-	S	-	-	-	PAS domain
AMFGONCA_00128	6.29e-38	-	-	-	-	-	-	-	-
AMFGONCA_00129	7.14e-91	-	-	-	EGP	-	-	-	Major Facilitator
AMFGONCA_00130	3.73e-300	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMFGONCA_00131	1.29e-115	-	-	-	EGP	-	-	-	Major Facilitator
AMFGONCA_00132	2.04e-183	-	-	-	M	-	-	-	Glycosyl transferase family 8
AMFGONCA_00133	3.04e-232	-	-	-	M	-	-	-	Glycosyl transferase family 8
AMFGONCA_00134	3.22e-214	arbZ	-	-	I	-	-	-	Phosphate acyltransferases
AMFGONCA_00135	1.61e-48	-	-	-	S	-	-	-	Cytochrome B5
AMFGONCA_00137	8.97e-174	-	-	-	L	-	-	-	Transposase DDE domain
AMFGONCA_00138	4.65e-278	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
AMFGONCA_00140	1.97e-315	chbC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AMFGONCA_00141	5.96e-283	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
AMFGONCA_00142	2.13e-167	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
AMFGONCA_00143	1.29e-295	-	-	-	E	ko:K03294	-	ko00000	amino acid
AMFGONCA_00144	0.0	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
AMFGONCA_00145	5.83e-67	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMFGONCA_00146	7.06e-114	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMFGONCA_00147	7.91e-232	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
AMFGONCA_00148	9.14e-163	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
AMFGONCA_00149	8.59e-133	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
AMFGONCA_00150	0.0	yhdP	-	-	S	-	-	-	Transporter associated domain
AMFGONCA_00151	2.14e-154	-	-	-	C	-	-	-	nitroreductase
AMFGONCA_00152	1.76e-52	-	-	-	-	-	-	-	-
AMFGONCA_00153	1.96e-113	ptbA	2.7.1.208	-	G	ko:K02755,ko:K02777,ko:K20107,ko:K20108	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
AMFGONCA_00154	1.52e-103	-	-	-	-	-	-	-	-
AMFGONCA_00155	6.89e-190	glvR	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
AMFGONCA_00156	0.0	glvC	2.7.1.208	-	G	ko:K02749,ko:K02750	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
AMFGONCA_00157	1.75e-187	-	-	-	S	-	-	-	hydrolase
AMFGONCA_00158	1.85e-205	-	-	-	S	-	-	-	Phospholipase, patatin family
AMFGONCA_00159	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
AMFGONCA_00160	4.44e-174	-	-	-	K	ko:K22103	-	ko00000,ko03000	DeoR C terminal sensor domain
AMFGONCA_00161	2.9e-79	-	-	-	S	-	-	-	Enterocin A Immunity
AMFGONCA_00162	7.49e-197	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
AMFGONCA_00163	6.63e-174	gntR	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
AMFGONCA_00164	1.01e-222	rihC	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
AMFGONCA_00165	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
AMFGONCA_00166	6.36e-162	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
AMFGONCA_00167	7.3e-216	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AMFGONCA_00168	1.04e-208	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
AMFGONCA_00169	2.2e-308	srrA1	-	-	G	ko:K02027,ko:K17244	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
AMFGONCA_00170	4.77e-294	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
AMFGONCA_00171	1.44e-184	arbx	-	-	M	-	-	-	Glycosyl transferase family 8
AMFGONCA_00172	1.46e-192	-	-	-	I	-	-	-	Acyl-transferase
AMFGONCA_00174	1.09e-46	-	-	-	-	-	-	-	-
AMFGONCA_00176	4.65e-168	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
AMFGONCA_00178	5.02e-190	-	-	-	K	-	-	-	Helix-turn-helix domain
AMFGONCA_00179	4.69e-158	-	-	-	S	-	-	-	Alpha/beta hydrolase family
AMFGONCA_00180	2.62e-199	epsV	-	-	S	-	-	-	glycosyl transferase family 2
AMFGONCA_00181	7.33e-19	-	-	-	-	-	-	-	-
AMFGONCA_00182	1.19e-31	-	-	-	L	ko:K07473	-	ko00000,ko02048	Addiction module antitoxin, RelB DinJ family
AMFGONCA_00183	1.86e-56	-	-	-	E	-	-	-	Pfam:DUF955
AMFGONCA_00185	2.84e-160	-	-	-	-	-	-	-	-
AMFGONCA_00188	4.13e-83	-	-	-	-	-	-	-	-
AMFGONCA_00189	3.56e-47	-	-	-	-	-	-	-	-
AMFGONCA_00190	9.14e-317	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
AMFGONCA_00191	1.91e-243	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
AMFGONCA_00192	9.82e-80	-	-	-	F	-	-	-	NUDIX domain
AMFGONCA_00193	1.83e-103	-	-	-	S	-	-	-	AAA domain
AMFGONCA_00194	1.5e-150	-	-	-	S	-	-	-	F420-0:Gamma-glutamyl ligase
AMFGONCA_00195	3.06e-85	yxaM	-	-	EGP	-	-	-	Major facilitator Superfamily
AMFGONCA_00196	3.24e-112	yxaM	-	-	EGP	-	-	-	Major facilitator Superfamily
AMFGONCA_00198	7.01e-32	-	-	-	K	-	-	-	Transcriptional regulator
AMFGONCA_00199	0.0	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
AMFGONCA_00200	4.97e-64	-	-	-	S	-	-	-	Metal binding domain of Ada
AMFGONCA_00201	0.0	-	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
AMFGONCA_00203	1.45e-133	-	-	-	-	-	-	-	-
AMFGONCA_00204	1.69e-49	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMFGONCA_00211	1.92e-106	ytsP	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
AMFGONCA_00212	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
AMFGONCA_00213	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AMFGONCA_00214	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AMFGONCA_00215	7.71e-157	comC	3.4.23.43	-	NOU	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	Bacterial Peptidase A24 N-terminal domain
AMFGONCA_00216	1.47e-91	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
AMFGONCA_00217	1.39e-106	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
AMFGONCA_00218	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AMFGONCA_00219	6.34e-66	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
AMFGONCA_00220	6.64e-146	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
AMFGONCA_00221	4.68e-138	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
AMFGONCA_00222	1.14e-63	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
AMFGONCA_00223	4.01e-198	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
AMFGONCA_00224	1.14e-62	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AMFGONCA_00225	9.07e-73	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
AMFGONCA_00226	8.7e-157	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
AMFGONCA_00227	1.66e-100	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AMFGONCA_00228	1.45e-34	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
AMFGONCA_00229	1.56e-55	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
AMFGONCA_00230	3.62e-79	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
AMFGONCA_00231	3.03e-44	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
AMFGONCA_00232	1.23e-123	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
AMFGONCA_00233	1e-39	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AMFGONCA_00234	7.94e-90	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
AMFGONCA_00235	7.18e-121	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
AMFGONCA_00236	2.8e-72	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
AMFGONCA_00237	3.73e-110	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
AMFGONCA_00238	2.22e-34	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
AMFGONCA_00239	4.95e-93	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
AMFGONCA_00240	1.25e-301	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
AMFGONCA_00241	3.7e-155	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
AMFGONCA_00242	3.13e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
AMFGONCA_00243	1.89e-21	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
AMFGONCA_00244	3.44e-72	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
AMFGONCA_00245	3.82e-82	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AMFGONCA_00246	3.62e-218	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AMFGONCA_00247	2.23e-80	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
AMFGONCA_00248	1.02e-198	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AMFGONCA_00249	5.5e-202	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AMFGONCA_00250	5.12e-174	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AMFGONCA_00251	1.06e-185	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
AMFGONCA_00252	3.22e-103	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AMFGONCA_00253	3.94e-85	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
AMFGONCA_00254	1.44e-234	-	-	-	L	-	-	-	Phage integrase family
AMFGONCA_00255	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
AMFGONCA_00256	2.77e-248	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AMFGONCA_00257	1.05e-176	-	-	-	F	-	-	-	Phosphorylase superfamily
AMFGONCA_00258	6.64e-185	-	-	-	F	-	-	-	Phosphorylase superfamily
AMFGONCA_00259	2.16e-193	-	2.3.1.81	-	V	ko:K00662	-	ko00000,ko01000,ko01504	Aminoglycoside 3-N-acetyltransferase
AMFGONCA_00260	1.76e-38	-	-	-	-	-	-	-	-
AMFGONCA_00261	6.31e-27	-	-	-	-	-	-	-	-
AMFGONCA_00264	2.12e-27	-	-	-	S	-	-	-	Phage uncharacterised protein (Phage_XkdX)
AMFGONCA_00265	6.36e-38	-	-	-	-	-	-	-	-
AMFGONCA_00266	3.98e-97	-	-	-	M	-	-	-	LysM domain
AMFGONCA_00267	3.3e-42	-	-	-	-	-	-	-	-
AMFGONCA_00272	6.56e-86	sagB	-	-	C	-	-	-	Nitroreductase family
AMFGONCA_00274	4.83e-114	-	-	-	S	-	-	-	PFAM Archaeal ATPase
AMFGONCA_00275	2.92e-115	-	-	-	S	-	-	-	PFAM Archaeal ATPase
AMFGONCA_00276	7.02e-36	-	-	-	-	-	-	-	-
AMFGONCA_00277	2.34e-105	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	UbiA prenyltransferase family
AMFGONCA_00278	4.53e-209	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
AMFGONCA_00279	3.09e-289	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMFGONCA_00280	1.73e-79	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
AMFGONCA_00281	1.45e-36	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
AMFGONCA_00282	1.77e-298	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMFGONCA_00286	5.38e-125	-	-	-	S	ko:K16924	-	ko00000,ko00002,ko02000	UPF0397 protein
AMFGONCA_00287	0.0	ykoD	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
AMFGONCA_00288	3.51e-187	cbiQ	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt transport
AMFGONCA_00289	1.46e-31	-	-	-	-	-	-	-	-
AMFGONCA_00290	7.19e-93	ytwI	-	-	S	-	-	-	Protein of unknown function (DUF441)
AMFGONCA_00291	0.0	citF	2.8.3.10	-	H	ko:K01643	ko02020,map02020	ko00000,ko00001,ko01000	Citrate (pro-3S)-lyase alpha chain
AMFGONCA_00292	3.46e-212	citE	4.1.3.34	-	G	ko:K01644	ko02020,map02020	ko00000,ko00001,ko01000	Belongs to the HpcH HpaI aldolase family
AMFGONCA_00293	1.6e-59	citD	-	-	C	ko:K01646	ko02020,map02020	ko00000,ko00001	Covalent carrier of the coenzyme of citrate lyase
AMFGONCA_00294	6.29e-250	citC	6.2.1.22	-	H	ko:K01910	ko02020,map02020	ko00000,ko00001,ko01000	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
AMFGONCA_00295	2.43e-196	-	-	-	I	-	-	-	Alpha/beta hydrolase family
AMFGONCA_00296	0.0	citP	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
AMFGONCA_00297	5.26e-171	-	-	-	H	-	-	-	Aldolase/RraA
AMFGONCA_00298	0.0	pepC4	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
AMFGONCA_00299	1.66e-217	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
AMFGONCA_00300	0.0	frdA	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
AMFGONCA_00301	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
AMFGONCA_00302	2.34e-122	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
AMFGONCA_00303	1.92e-241	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AMFGONCA_00304	4.37e-205	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
AMFGONCA_00305	1.33e-225	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
AMFGONCA_00306	0.0	aha1	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
AMFGONCA_00307	5.55e-119	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AMFGONCA_00308	3.53e-228	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
AMFGONCA_00309	0.0	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
AMFGONCA_00310	8.44e-306	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
AMFGONCA_00311	0.0	-	-	-	P	ko:K06148	-	ko00000,ko02000	ABC transporter
AMFGONCA_00312	6.04e-49	-	-	-	-	-	-	-	-
AMFGONCA_00314	3.44e-160	-	-	-	S	-	-	-	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
AMFGONCA_00315	7.94e-114	-	-	-	K	-	-	-	GNAT family
AMFGONCA_00316	3.7e-258	XK27_00915	-	-	C	-	-	-	Luciferase-like monooxygenase
AMFGONCA_00317	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
AMFGONCA_00318	3.03e-300	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
AMFGONCA_00319	1.15e-64	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
AMFGONCA_00320	4.39e-268	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
AMFGONCA_00322	5.01e-55	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
AMFGONCA_00323	1.36e-45	-	-	-	-	-	-	-	-
AMFGONCA_00324	1.04e-31	-	-	-	-	-	-	-	-
AMFGONCA_00325	6.48e-167	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
AMFGONCA_00326	3.21e-175	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
AMFGONCA_00327	7.7e-126	-	-	-	L	-	-	-	Helix-turn-helix domain
AMFGONCA_00330	3.4e-169	-	-	-	EGP	-	-	-	Major Facilitator
AMFGONCA_00331	1.66e-44	-	-	-	K	-	-	-	Transcriptional regulator
AMFGONCA_00332	4.83e-144	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
AMFGONCA_00333	4.45e-84	-	-	-	K	-	-	-	transcriptional regulator
AMFGONCA_00334	9.13e-157	-	-	-	L	-	-	-	PFAM transposase IS116 IS110 IS902
AMFGONCA_00336	8.22e-38	-	-	-	-	-	-	-	-
AMFGONCA_00337	8.12e-144	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AMFGONCA_00338	2.91e-186	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
AMFGONCA_00339	5.62e-95	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
AMFGONCA_00340	1.1e-178	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMFGONCA_00341	2.34e-76	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
AMFGONCA_00342	5.37e-72	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
AMFGONCA_00343	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
AMFGONCA_00344	1.18e-66	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
AMFGONCA_00345	9.37e-96	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
AMFGONCA_00346	5.32e-57	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
AMFGONCA_00347	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AMFGONCA_00348	1.32e-305	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
AMFGONCA_00349	3.16e-231	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
AMFGONCA_00350	4.29e-275	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AMFGONCA_00351	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AMFGONCA_00352	7.58e-69	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
AMFGONCA_00353	1.39e-237	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
AMFGONCA_00354	3.89e-132	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
AMFGONCA_00355	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
AMFGONCA_00356	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
AMFGONCA_00357	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
AMFGONCA_00358	1.06e-58	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AMFGONCA_00359	2.79e-102	-	-	-	-	-	-	-	-
AMFGONCA_00360	2.14e-231	-	-	-	M	-	-	-	CHAP domain
AMFGONCA_00361	0.0	scrA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
AMFGONCA_00362	0.0	scrB	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
AMFGONCA_00363	2.14e-234	scrR	-	-	K	ko:K03484	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
AMFGONCA_00364	1.28e-168	-	-	-	L	-	-	-	PFAM transposase IS116 IS110 IS902
AMFGONCA_00366	8.25e-16	-	-	-	S	-	-	-	Protein conserved in bacteria
AMFGONCA_00367	4.26e-27	-	-	-	E	-	-	-	Pfam:DUF955
AMFGONCA_00368	2.99e-114	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
AMFGONCA_00370	1.79e-42	-	-	-	K	-	-	-	Bacterial regulatory helix-turn-helix protein, lysR family
AMFGONCA_00371	2.15e-127	-	-	-	L	-	-	-	Helix-turn-helix domain
AMFGONCA_00372	3.24e-290	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
AMFGONCA_00373	1.32e-47	-	-	-	-	-	-	-	-
AMFGONCA_00374	6.79e-190	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
AMFGONCA_00375	6.43e-143	-	-	-	S	-	-	-	Fic/DOC family
AMFGONCA_00376	1.91e-233	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
AMFGONCA_00379	6.13e-110	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
AMFGONCA_00380	1.2e-199	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
AMFGONCA_00381	1.05e-45	-	-	-	-	-	-	-	-
AMFGONCA_00382	0.0	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative DNA-binding domain
AMFGONCA_00383	1.66e-303	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
AMFGONCA_00384	1.51e-117	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
AMFGONCA_00385	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
AMFGONCA_00386	6.86e-276	pmrA	-	-	EGP	ko:K08161	-	ko00000,ko02000	MFS_1 like family
AMFGONCA_00387	2.2e-171	-	-	-	-	-	-	-	-
AMFGONCA_00388	8.06e-56	-	-	-	-	-	-	-	-
AMFGONCA_00389	5.1e-265	pepA	-	-	E	-	-	-	M42 glutamyl aminopeptidase
AMFGONCA_00390	0.0	ykpA	-	-	S	-	-	-	ABC transporter, ATP-binding protein
AMFGONCA_00391	6.07e-223	ydhF	-	-	S	-	-	-	Aldo keto reductase
AMFGONCA_00392	6.41e-194	-	-	-	-	-	-	-	-
AMFGONCA_00393	7.64e-307	steT	-	-	E	ko:K03294	-	ko00000	amino acid
AMFGONCA_00394	5.64e-311	steT	-	-	E	ko:K03294	-	ko00000	amino acid
AMFGONCA_00395	6.43e-167	-	-	-	F	-	-	-	glutamine amidotransferase
AMFGONCA_00396	2.05e-188	peb1A	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
AMFGONCA_00397	2.53e-106	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
AMFGONCA_00398	0.0	XK27_09600	-	-	V	ko:K06147,ko:K18891	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
AMFGONCA_00399	0.0	XK27_09605	-	-	V	ko:K18892	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter transmembrane region
AMFGONCA_00400	7.3e-131	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
AMFGONCA_00401	1.34e-106	-	-	-	G	-	-	-	MFS/sugar transport protein
AMFGONCA_00402	5.15e-190	-	-	-	G	-	-	-	MFS/sugar transport protein
AMFGONCA_00403	6.42e-147	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Zeta toxin
AMFGONCA_00404	1.19e-174	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
AMFGONCA_00405	1.5e-190	glnH	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
AMFGONCA_00406	7.42e-123	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
AMFGONCA_00407	8.58e-140	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
AMFGONCA_00408	1.04e-211	-	-	-	S	-	-	-	Protein of unknown function (DUF2974)
AMFGONCA_00412	2.02e-35	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
AMFGONCA_00413	4.73e-32	-	-	-	S	-	-	-	Domain of unknown function (DUF4417)
AMFGONCA_00414	0.000145	-	-	-	M	ko:K11021	-	ko00000,ko02042	COG3209 Rhs family protein
AMFGONCA_00415	1.31e-231	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
AMFGONCA_00416	3.7e-113	gtcA1	-	-	S	-	-	-	Teichoic acid glycosylation protein
AMFGONCA_00417	5.14e-105	ykuP	-	-	C	ko:K03839	-	ko00000	Flavodoxin
AMFGONCA_00418	9.97e-306	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
AMFGONCA_00419	7.05e-295	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
AMFGONCA_00420	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
AMFGONCA_00421	0.0	mtlR	-	-	K	ko:K03483	-	ko00000,ko03000	Mga helix-turn-helix domain
AMFGONCA_00422	0.0	mtlA	2.7.1.197	-	G	ko:K02799,ko:K02800	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
AMFGONCA_00423	4.73e-102	mtlF	2.7.1.197	-	G	ko:K02798	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AMFGONCA_00424	2.7e-277	mtlD	1.1.1.17	-	C	ko:K00009	ko00051,map00051	ko00000,ko00001,ko01000	mannitol-1-phosphate 5-dehydrogenase activity
AMFGONCA_00425	5.26e-36	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
AMFGONCA_00426	2.53e-100	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
AMFGONCA_00427	3.36e-42	-	-	-	-	-	-	-	-
AMFGONCA_00428	9.05e-78	apfA	3.6.1.61	-	F	ko:K18445	ko00230,map00230	ko00000,ko00001,ko01000	Nudix hydrolase
AMFGONCA_00429	6.94e-202	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
AMFGONCA_00430	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
AMFGONCA_00431	0.0	pckA	4.1.1.49	-	H	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Phosphoenolpyruvate carboxykinase
AMFGONCA_00432	0.0	-	-	-	S	-	-	-	TerB-C domain
AMFGONCA_00433	4.13e-310	-	-	-	P	-	-	-	P-loop Domain of unknown function (DUF2791)
AMFGONCA_00434	0.0	-	-	-	L	ko:K03724	-	ko00000,ko01000,ko03400	DEAD DEAH box helicase
AMFGONCA_00435	7.82e-80	-	-	-	-	-	-	-	-
AMFGONCA_00436	1.22e-289	amt	-	-	P	ko:K03320	-	ko00000,ko02000	ammonium transporter
AMFGONCA_00437	6.58e-175	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
AMFGONCA_00439	4.51e-77	psiE	-	-	S	ko:K13256	-	ko00000	Phosphate-starvation-inducible E
AMFGONCA_00440	1.08e-145	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
AMFGONCA_00441	3.65e-90	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
AMFGONCA_00443	1.04e-41	-	-	-	-	-	-	-	-
AMFGONCA_00444	2.77e-220	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase
AMFGONCA_00445	1.25e-17	-	-	-	-	-	-	-	-
AMFGONCA_00446	8.08e-160	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AMFGONCA_00447	2.57e-108	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AMFGONCA_00448	6.59e-160	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
AMFGONCA_00449	5.94e-148	-	-	-	I	-	-	-	Acid phosphatase homologues
AMFGONCA_00450	1.49e-151	-	-	-	V	-	-	-	Abi-like protein
AMFGONCA_00452	1.34e-175	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
AMFGONCA_00453	1.3e-31	-	-	-	-	-	-	-	-
AMFGONCA_00454	2.61e-195	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
AMFGONCA_00455	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AMFGONCA_00456	3.56e-186	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
AMFGONCA_00457	5.23e-229	yvdE	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
AMFGONCA_00458	1.28e-258	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AMFGONCA_00459	4.65e-65	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
AMFGONCA_00460	0.0	malA1	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain
AMFGONCA_00461	0.0	nplT	3.2.1.133, 3.2.1.135, 3.2.1.54	GH13	G	ko:K01208	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
AMFGONCA_00462	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
AMFGONCA_00463	7.7e-149	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
AMFGONCA_00464	2.85e-266	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
AMFGONCA_00465	5.5e-282	-	-	-	G	ko:K15770	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
AMFGONCA_00466	0.0	malF	-	-	P	ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
AMFGONCA_00467	1.39e-197	malG	-	-	P	ko:K15772	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
AMFGONCA_00468	1.45e-74	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
AMFGONCA_00474	5.95e-114	ymdB	-	-	S	-	-	-	Macro domain protein
AMFGONCA_00475	2.41e-127	mdtG2	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
AMFGONCA_00476	1.05e-143	mdtG2	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
AMFGONCA_00477	7.62e-223	-	-	-	-	-	-	-	-
AMFGONCA_00478	2.2e-79	lysM	-	-	M	-	-	-	LysM domain
AMFGONCA_00479	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
AMFGONCA_00480	2.26e-153	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
AMFGONCA_00481	7.8e-10	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
AMFGONCA_00482	3.85e-180	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
AMFGONCA_00483	9.91e-150	-	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Ham1 family
AMFGONCA_00484	8.6e-128	ltrA	-	-	S	-	-	-	Bacterial low temperature requirement A protein (LtrA)
AMFGONCA_00485	4.3e-175	-	-	-	S	-	-	-	Alpha/beta hydrolase family
AMFGONCA_00486	7.81e-169	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMFGONCA_00487	1.21e-44	-	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
AMFGONCA_00488	3.82e-149	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMFGONCA_00489	5.14e-264	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
AMFGONCA_00490	1.82e-135	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
AMFGONCA_00491	4.4e-226	ydbI	-	-	K	-	-	-	AI-2E family transporter
AMFGONCA_00492	3.93e-134	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
AMFGONCA_00493	2.55e-26	-	-	-	-	-	-	-	-
AMFGONCA_00494	1.59e-315	-	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
AMFGONCA_00495	8.64e-176	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
AMFGONCA_00496	4.76e-168	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
AMFGONCA_00497	3.35e-223	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
AMFGONCA_00498	7.75e-170	ysaA	3.1.3.5, 3.8.1.2	-	S	ko:K01560,ko:K07025,ko:K08723	ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
AMFGONCA_00499	7.2e-202	-	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
AMFGONCA_00500	1.65e-205	yvgN	-	-	C	-	-	-	Aldo keto reductase
AMFGONCA_00501	0.0	fusA1	-	-	J	-	-	-	elongation factor G
AMFGONCA_00502	3.16e-192	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	haloacid dehalogenase-like hydrolase
AMFGONCA_00503	1.07e-179	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
AMFGONCA_00504	9.62e-247	ldhA	1.1.1.28	-	C	ko:K03778,ko:K18347	ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01504	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AMFGONCA_00505	1.44e-07	-	-	-	S	-	-	-	YSIRK type signal peptide
AMFGONCA_00507	1.2e-202	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
AMFGONCA_00508	0.0	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
AMFGONCA_00509	2.17e-201	-	-	-	L	-	-	-	Helicase C-terminal domain protein
AMFGONCA_00510	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
AMFGONCA_00511	6.72e-261	pbpX	-	-	V	-	-	-	Beta-lactamase
AMFGONCA_00512	1.05e-289	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
AMFGONCA_00513	4.19e-92	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
AMFGONCA_00514	2.45e-95	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
AMFGONCA_00516	1.47e-66	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain
AMFGONCA_00517	1.41e-166	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
AMFGONCA_00518	2.16e-220	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
AMFGONCA_00519	5e-53	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
AMFGONCA_00520	1.86e-50	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
AMFGONCA_00521	0.0	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AMFGONCA_00522	2.48e-129	yjcK	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
AMFGONCA_00523	1.31e-142	-	-	-	S	-	-	-	SNARE associated Golgi protein
AMFGONCA_00524	2.52e-194	-	-	-	I	-	-	-	alpha/beta hydrolase fold
AMFGONCA_00525	2.71e-200	plcR	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
AMFGONCA_00526	2.73e-107	-	-	-	F	-	-	-	Nucleoside 2-deoxyribosyltransferase
AMFGONCA_00527	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
AMFGONCA_00528	9.76e-200	-	-	-	-	-	-	-	-
AMFGONCA_00529	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
AMFGONCA_00530	3.76e-128	yobS	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
AMFGONCA_00531	7.69e-205	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
AMFGONCA_00532	1.34e-205	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
AMFGONCA_00533	3.51e-309	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
AMFGONCA_00534	0.0	-	-	-	S	-	-	-	Zn-dependent metallo-hydrolase RNA specificity domain
AMFGONCA_00535	5.62e-187	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
AMFGONCA_00536	1.64e-202	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	ABC-type sugar transport systems, permease components
AMFGONCA_00537	8.72e-258	malK	-	-	P	ko:K10112,ko:K17240	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
AMFGONCA_00538	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
AMFGONCA_00539	7.24e-204	endA	-	-	F	ko:K15051	-	ko00000	DNA RNA non-specific endonuclease
AMFGONCA_00540	1.83e-230	-	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	EXOIII
AMFGONCA_00541	5.96e-202	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AMFGONCA_00542	2.23e-150	yviA	-	-	S	-	-	-	Protein of unknown function (DUF421)
AMFGONCA_00543	2.94e-74	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
AMFGONCA_00544	1.57e-128	-	-	-	-	-	-	-	-
AMFGONCA_00545	6.91e-61	-	-	-	-	-	-	-	-
AMFGONCA_00546	1.19e-68	-	-	-	M	-	-	-	LysM domain
AMFGONCA_00547	0.0	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
AMFGONCA_00550	1.1e-72	-	-	-	-	-	-	-	-
AMFGONCA_00551	1.75e-190	-	-	-	S	-	-	-	Protein of unknown function (DUF3383)
AMFGONCA_00552	7.95e-69	-	-	-	-	-	-	-	-
AMFGONCA_00553	1.8e-59	-	-	-	-	-	-	-	-
AMFGONCA_00554	1.26e-88	-	-	-	-	-	-	-	-
AMFGONCA_00556	1.83e-181	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2184)
AMFGONCA_00557	5.09e-76	-	-	-	-	-	-	-	-
AMFGONCA_00558	2.77e-137	-	-	-	S	ko:K09960	-	ko00000	Uncharacterized protein conserved in bacteria (DUF2213)
AMFGONCA_00559	1.14e-16	-	-	-	S	-	-	-	Lysin motif
AMFGONCA_00560	2.92e-127	-	-	-	S	-	-	-	Phage Mu protein F like protein
AMFGONCA_00561	3.24e-178	-	-	-	S	ko:K09961	-	ko00000	Protein of unknown function (DUF1073)
AMFGONCA_00562	6.33e-235	-	-	-	S	-	-	-	Terminase-like family
AMFGONCA_00563	1.22e-24	-	-	-	S	-	-	-	Terminase-like family
AMFGONCA_00564	6.3e-48	-	-	-	L	ko:K07474	-	ko00000	Terminase small subunit
AMFGONCA_00565	7.69e-16	-	-	-	N	-	-	-	HicA toxin of bacterial toxin-antitoxin,
AMFGONCA_00566	8.27e-46	-	-	-	S	-	-	-	HicB_like antitoxin of bacterial toxin-antitoxin system
AMFGONCA_00575	1.08e-10	-	-	-	-	-	-	-	-
AMFGONCA_00576	5.99e-52	-	-	-	L	-	-	-	Endodeoxyribonuclease RusA
AMFGONCA_00582	4.6e-64	-	-	-	L	ko:K02315	-	ko00000,ko03032	IstB-like ATP binding protein
AMFGONCA_00583	3.2e-41	-	-	-	S	-	-	-	Conserved phage C-terminus (Phg_2220_C)
AMFGONCA_00584	1.11e-70	-	-	-	S	-	-	-	Protein of unknown function (DUF1071)
AMFGONCA_00588	2.36e-08	-	-	-	K	-	-	-	DNA-binding protein
AMFGONCA_00594	5.23e-122	-	-	-	S	-	-	-	AntA/AntB antirepressor
AMFGONCA_00595	8.72e-07	-	-	-	-	-	-	-	-
AMFGONCA_00600	1.71e-102	-	-	-	S	-	-	-	DNA binding
AMFGONCA_00601	1.21e-16	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
AMFGONCA_00602	7e-19	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
AMFGONCA_00608	1.09e-226	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
AMFGONCA_00609	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
AMFGONCA_00610	5.88e-278	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
AMFGONCA_00611	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
AMFGONCA_00612	3.74e-109	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
AMFGONCA_00613	2.56e-248	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
AMFGONCA_00614	5.35e-223	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
AMFGONCA_00615	1.35e-197	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AMFGONCA_00616	1.67e-79	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
AMFGONCA_00617	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
AMFGONCA_00618	1.61e-64	ylxQ	-	-	J	-	-	-	ribosomal protein
AMFGONCA_00619	3.75e-63	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
AMFGONCA_00620	1.19e-259	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
AMFGONCA_00621	3.4e-108	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
AMFGONCA_00622	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AMFGONCA_00623	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
AMFGONCA_00624	6.38e-254	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
AMFGONCA_00625	3.93e-181	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
AMFGONCA_00626	6.38e-178	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AMFGONCA_00627	1.22e-121	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
AMFGONCA_00628	5.86e-168	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
AMFGONCA_00629	1.76e-235	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
AMFGONCA_00630	2.21e-180	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
AMFGONCA_00631	2.03e-251	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
AMFGONCA_00632	1.65e-151	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
AMFGONCA_00633	2.01e-291	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
AMFGONCA_00634	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
AMFGONCA_00635	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
AMFGONCA_00636	0.0	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
AMFGONCA_00637	1.3e-40	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
AMFGONCA_00638	4.16e-51	ynzC	-	-	S	-	-	-	UPF0291 protein
AMFGONCA_00639	9.86e-146	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AMFGONCA_00641	8.59e-258	-	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
AMFGONCA_00642	3.45e-144	-	-	-	L	-	-	-	Resolvase, N-terminal
AMFGONCA_00643	6.01e-147	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
AMFGONCA_00644	3.84e-153	ung2	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil-DNA glycosylase
AMFGONCA_00645	1.66e-268	-	-	-	S	-	-	-	SLAP domain
AMFGONCA_00646	1.64e-74	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
AMFGONCA_00647	1.63e-173	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
AMFGONCA_00648	2.08e-122	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AMFGONCA_00649	6.78e-60	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
AMFGONCA_00650	2.32e-290	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AMFGONCA_00651	5.56e-72	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
AMFGONCA_00652	0.0	ctrA	-	-	E	ko:K03294	-	ko00000	amino acid
AMFGONCA_00653	8.17e-177	-	-	-	L	-	-	-	COG3385 FOG Transposase and inactivated derivatives
AMFGONCA_00654	2.14e-103	-	-	-	-	-	-	-	-
AMFGONCA_00655	3.26e-23	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
AMFGONCA_00656	2.65e-81	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
AMFGONCA_00657	3.37e-192	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
AMFGONCA_00658	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
AMFGONCA_00659	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
AMFGONCA_00660	0.0	pox1	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
AMFGONCA_00661	2.42e-40	-	-	-	-	-	-	-	-
AMFGONCA_00662	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
AMFGONCA_00663	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
AMFGONCA_00664	1.21e-42	-	-	-	E	-	-	-	Zn peptidase
AMFGONCA_00665	8.29e-76	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
AMFGONCA_00666	4.75e-58	-	-	-	-	-	-	-	-
AMFGONCA_00667	4.54e-135	-	-	-	S	-	-	-	Bacteriocin helveticin-J
AMFGONCA_00668	2.66e-153	-	-	-	S	-	-	-	SLAP domain
AMFGONCA_00669	6.57e-175	-	-	-	S	-	-	-	SLAP domain
AMFGONCA_00670	3.91e-269	-	-	-	-	-	-	-	-
AMFGONCA_00671	6.46e-27	-	-	-	-	-	-	-	-
AMFGONCA_00672	1.83e-316	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
AMFGONCA_00673	3.14e-137	-	-	-	-	-	-	-	-
AMFGONCA_00674	6.63e-147	crp2	-	-	K	ko:K10914,ko:K21562	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	helix_turn_helix, cAMP Regulatory protein
AMFGONCA_00675	0.0	copA	3.6.3.3, 3.6.3.5, 3.6.3.54	-	P	ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
AMFGONCA_00676	3.27e-58	-	-	-	S	-	-	-	Cupredoxin-like domain
AMFGONCA_00677	5.94e-75	-	-	-	S	-	-	-	Cupredoxin-like domain
AMFGONCA_00678	3.15e-48	-	-	-	-	-	-	-	-
AMFGONCA_00682	2.27e-179	-	-	-	-	-	-	-	-
AMFGONCA_00683	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
AMFGONCA_00684	7.23e-50	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
AMFGONCA_00685	1.46e-125	-	-	-	L	-	-	-	Bifunctional protein
AMFGONCA_00686	1.17e-209	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
AMFGONCA_00687	5.7e-208	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
AMFGONCA_00688	1.6e-215	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
AMFGONCA_00689	8.62e-273	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
AMFGONCA_00690	3.65e-273	mvaA	1.1.1.88, 2.3.1.9	-	C	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the HMG-CoA reductase family
AMFGONCA_00691	7.15e-277	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
AMFGONCA_00692	2.6e-59	-	-	-	-	-	-	-	-
AMFGONCA_00693	1.52e-34	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
AMFGONCA_00694	1.17e-151	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
AMFGONCA_00695	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AMFGONCA_00696	3.39e-186	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
AMFGONCA_00697	1.43e-110	-	-	-	-	-	-	-	-
AMFGONCA_00698	3.85e-98	-	-	-	-	-	-	-	-
AMFGONCA_00699	1.51e-182	hlyX	-	-	S	ko:K03699	-	ko00000,ko02042	Transporter associated domain
AMFGONCA_00700	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
AMFGONCA_00701	8.42e-60	XK27_09445	-	-	S	-	-	-	Domain of unknown function (DUF1827)
AMFGONCA_00702	0.0	clpE	-	-	O	ko:K03697	-	ko00000,ko03110	Belongs to the ClpA ClpB family
AMFGONCA_00703	1.29e-54	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
AMFGONCA_00704	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AMFGONCA_00705	6.28e-87	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
AMFGONCA_00706	1.5e-178	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
AMFGONCA_00707	7.37e-158	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
AMFGONCA_00708	3.83e-17	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
AMFGONCA_00709	5.74e-148	yjbH	-	-	Q	-	-	-	Thioredoxin
AMFGONCA_00710	1.71e-143	-	-	-	S	-	-	-	CYTH
AMFGONCA_00711	1.7e-147	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
AMFGONCA_00712	1.91e-195	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AMFGONCA_00713	7.96e-221	rluD2	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
AMFGONCA_00714	0.0	mycA	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
AMFGONCA_00715	3.77e-122	-	-	-	S	-	-	-	SNARE associated Golgi protein
AMFGONCA_00716	6.09e-121	-	-	-	-	-	-	-	-
AMFGONCA_00718	7.04e-159	-	-	-	M	ko:K14193	ko05150,map05150	ko00000,ko00001	Iron Transport-associated domain
AMFGONCA_00719	2.07e-203	isdE	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
AMFGONCA_00720	1.55e-201	isdF	-	-	U	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AMFGONCA_00721	4.28e-178	-	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	abc transporter atp-binding protein
AMFGONCA_00722	2.22e-60	hupB2	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
AMFGONCA_00723	2.74e-69	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	Bacterial toxin of type II toxin-antitoxin system, YafQ
AMFGONCA_00724	9.43e-52	-	-	-	S	ko:K07473	-	ko00000,ko02048	RelB antitoxin
AMFGONCA_00725	7.04e-218	-	-	-	G	-	-	-	BadF/BadG/BcrA/BcrD ATPase family
AMFGONCA_00726	0.0	-	-	-	S	-	-	-	membrane
AMFGONCA_00727	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
AMFGONCA_00728	6.25e-29	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
AMFGONCA_00729	7.92e-126	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AMFGONCA_00730	3.25e-154	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Rhomboid family
AMFGONCA_00731	4.1e-47	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
AMFGONCA_00732	4.95e-89	yqhL	-	-	P	-	-	-	Rhodanese-like protein
AMFGONCA_00733	3.84e-216	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
AMFGONCA_00734	5.88e-286	ynbB	-	-	P	-	-	-	aluminum resistance
AMFGONCA_00735	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
AMFGONCA_00736	2.37e-219	-	-	-	-	-	-	-	-
AMFGONCA_00737	8.51e-205	-	-	-	-	-	-	-	-
AMFGONCA_00741	6.78e-47	-	-	-	-	-	-	-	-
AMFGONCA_00742	1.44e-161	-	-	-	S	-	-	-	interspecies interaction between organisms
AMFGONCA_00743	1.28e-09	-	-	-	S	-	-	-	PFAM HicB family
AMFGONCA_00744	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
AMFGONCA_00745	3.15e-33	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
AMFGONCA_00746	1.02e-19	-	-	-	S	-	-	-	Phage portal protein
AMFGONCA_00748	6.8e-273	-	-	-	S	-	-	-	Phage Terminase
AMFGONCA_00751	6.95e-71	-	-	-	L	-	-	-	Phage terminase, small subunit
AMFGONCA_00752	3.73e-80	-	-	-	L	-	-	-	HNH nucleases
AMFGONCA_00753	2.55e-09	-	-	-	-	-	-	-	-
AMFGONCA_00759	1.21e-106	-	-	-	K	ko:K07741	-	ko00000	AntA/AntB antirepressor
AMFGONCA_00765	9.66e-13	-	-	-	-	-	-	-	-
AMFGONCA_00768	5.65e-23	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
AMFGONCA_00776	2.86e-15	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
AMFGONCA_00777	5.53e-95	-	-	-	K	-	-	-	Peptidase S24-like
AMFGONCA_00778	1.25e-24	-	-	-	S	-	-	-	Hypothetical protein (DUF2513)
AMFGONCA_00781	8.96e-231	-	-	-	V	-	-	-	Abi-like protein
AMFGONCA_00782	4.87e-154	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
AMFGONCA_00783	2.48e-12	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AMFGONCA_00785	2.83e-205	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AMFGONCA_00786	1.34e-151	-	-	-	-	-	-	-	-
AMFGONCA_00787	3.06e-202	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
AMFGONCA_00788	2.95e-283	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
AMFGONCA_00789	0.0	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase
AMFGONCA_00790	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
AMFGONCA_00791	6.83e-133	yrgI	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Histidine phosphatase superfamily (branch 1)
AMFGONCA_00792	2.84e-108	-	-	-	K	-	-	-	FR47-like protein
AMFGONCA_00793	1.24e-93	-	-	-	L	-	-	-	Transposase DDE domain
AMFGONCA_00794	9.23e-106	-	-	-	L	-	-	-	PFAM Transposase DDE domain
AMFGONCA_00795	8.88e-178	-	-	-	P	-	-	-	Voltage gated chloride channel
AMFGONCA_00796	3.44e-238	-	-	-	C	-	-	-	FMN-dependent dehydrogenase
AMFGONCA_00797	8.68e-69	-	-	-	-	-	-	-	-
AMFGONCA_00798	1.17e-56	-	-	-	-	-	-	-	-
AMFGONCA_00799	1.33e-295	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AMFGONCA_00800	0.0	-	-	-	E	-	-	-	amino acid
AMFGONCA_00801	1.64e-200	yhaX	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
AMFGONCA_00802	0.0	dexB	3.2.1.70	-	G	ko:K01215	-	ko00000,ko01000	Alpha amylase, catalytic domain protein
AMFGONCA_00803	1.07e-52	rpmE	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
AMFGONCA_00804	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
AMFGONCA_00805	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
AMFGONCA_00806	9.39e-80	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
AMFGONCA_00807	1.62e-276	alr	5.1.1.1, 5.1.1.5	-	E	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AMFGONCA_00808	1.23e-166	-	-	-	S	-	-	-	(CBS) domain
AMFGONCA_00809	2.93e-234	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
AMFGONCA_00810	1.89e-134	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
AMFGONCA_00811	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AMFGONCA_00812	7.32e-46	yabO	-	-	J	-	-	-	S4 domain protein
AMFGONCA_00813	7.52e-78	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
AMFGONCA_00814	1.61e-81	-	-	-	J	ko:K07571	-	ko00000	S1 RNA binding domain
AMFGONCA_00815	3.35e-308	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
AMFGONCA_00816	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AMFGONCA_00817	3.91e-214	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
AMFGONCA_00818	6.95e-50	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMFGONCA_00819	2.97e-110	-	-	-	-	-	-	-	-
AMFGONCA_00820	0.0	XK27_08315	-	-	M	-	-	-	Sulfatase
AMFGONCA_00821	1.03e-145	plsY1	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
AMFGONCA_00822	6.88e-257	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
AMFGONCA_00823	5.18e-128	-	-	-	G	-	-	-	Aldose 1-epimerase
AMFGONCA_00824	4.51e-171	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AMFGONCA_00825	1.72e-149	-	-	-	-	-	-	-	-
AMFGONCA_00826	3.27e-167	-	-	-	-	-	-	-	-
AMFGONCA_00827	9.7e-207	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
AMFGONCA_00828	1.22e-138	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
AMFGONCA_00829	7.07e-141	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
AMFGONCA_00830	1.64e-222	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
AMFGONCA_00831	7.32e-232	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
AMFGONCA_00832	2.09e-286	-	-	-	NU	-	-	-	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
AMFGONCA_00834	7.39e-165	-	-	-	S	-	-	-	SLAP domain
AMFGONCA_00836	2.85e-54	-	-	-	-	-	-	-	-
AMFGONCA_00837	3.6e-101	-	-	-	K	-	-	-	DNA-templated transcription, initiation
AMFGONCA_00839	1.08e-186	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
AMFGONCA_00840	5.58e-143	-	-	-	S	-	-	-	SLAP domain
AMFGONCA_00841	3.39e-07	-	-	-	S	-	-	-	Protein of unknown function (DUF2922)
AMFGONCA_00842	1.21e-40	-	-	-	-	-	-	-	-
AMFGONCA_00843	3.87e-46	sagD	-	-	S	-	-	-	YcaO cyclodehydratase, ATP-ad Mg2+-binding
AMFGONCA_00844	0.0	pulA	3.2.1.41	CBM48,GH13	G	ko:K01200	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko01000	belongs to the glycosyl hydrolase 13 family
AMFGONCA_00845	2.51e-52	-	-	-	K	ko:K03484	-	ko00000,ko03000	Periplasmic binding protein domain
AMFGONCA_00846	7.63e-43	-	-	-	K	ko:K03484	-	ko00000,ko03000	Periplasmic binding protein domain
AMFGONCA_00847	1.35e-157	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMFGONCA_00848	3.73e-55	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMFGONCA_00849	5.32e-42	-	-	-	-	ko:K18829	-	ko00000,ko02048	-
AMFGONCA_00850	1.64e-90	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	Toxin-antitoxin system, toxin component, MazF family
AMFGONCA_00851	9e-132	-	-	-	L	-	-	-	Integrase
AMFGONCA_00852	6.53e-194	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMFGONCA_00853	3.1e-72	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMFGONCA_00854	5.1e-139	-	-	-	L	-	-	-	PFAM Integrase catalytic
AMFGONCA_00855	6.08e-148	eriC	-	-	P	ko:K03281	-	ko00000	chloride
AMFGONCA_00856	6.55e-76	eriC	-	-	P	ko:K03281	-	ko00000	chloride
AMFGONCA_00857	1.45e-34	-	-	-	K	-	-	-	FCD
AMFGONCA_00858	1.43e-19	-	-	-	K	-	-	-	FCD
AMFGONCA_00859	4.37e-132	-	-	-	GM	-	-	-	NmrA-like family
AMFGONCA_00860	5.5e-154	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
AMFGONCA_00861	6.35e-164	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
AMFGONCA_00862	1.52e-212	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
AMFGONCA_00863	1.01e-122	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
AMFGONCA_00864	2.13e-229	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
AMFGONCA_00865	2.04e-313	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
AMFGONCA_00866	3.47e-268	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
AMFGONCA_00867	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
AMFGONCA_00868	6.69e-115	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
AMFGONCA_00869	3.15e-212	-	-	-	L	-	-	-	HNH nucleases
AMFGONCA_00870	2.61e-153	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
AMFGONCA_00871	1.43e-222	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
AMFGONCA_00872	1.66e-239	-	-	-	M	-	-	-	Glycosyl transferase
AMFGONCA_00873	1.34e-09	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMFGONCA_00874	9.69e-25	-	-	-	-	-	-	-	-
AMFGONCA_00875	1.42e-102	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
AMFGONCA_00876	5.88e-275	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
AMFGONCA_00877	1.94e-91	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
AMFGONCA_00878	4.43e-25	ysdE	-	-	P	-	-	-	Citrate transporter
AMFGONCA_00879	1.99e-205	ysdE	-	-	P	-	-	-	Citrate transporter
AMFGONCA_00880	6.78e-124	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
AMFGONCA_00881	9.49e-207	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
AMFGONCA_00882	1.05e-222	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
AMFGONCA_00883	0.0	-	-	-	S	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
AMFGONCA_00884	2.05e-115	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
AMFGONCA_00885	1.09e-223	pepI	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
AMFGONCA_00886	1.16e-115	-	-	-	G	-	-	-	Peptidase_C39 like family
AMFGONCA_00887	9.23e-209	-	-	-	M	-	-	-	NlpC/P60 family
AMFGONCA_00888	1.68e-44	-	-	-	G	-	-	-	Peptidase_C39 like family
AMFGONCA_00889	8.64e-107	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
AMFGONCA_00890	2.87e-227	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
AMFGONCA_00891	9.78e-188	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
AMFGONCA_00892	7.44e-192	yycI	-	-	S	-	-	-	YycH protein
AMFGONCA_00893	0.0	yycH	-	-	S	-	-	-	YycH protein
AMFGONCA_00894	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
AMFGONCA_00895	3.39e-88	-	-	-	S	ko:K06915	-	ko00000	cog cog0433
AMFGONCA_00896	9.86e-146	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
AMFGONCA_00897	8.81e-40	-	-	-	M	-	-	-	Mycoplasma protein of unknown function, DUF285
AMFGONCA_00899	1.61e-70	-	-	-	-	-	-	-	-
AMFGONCA_00900	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
AMFGONCA_00901	6.39e-102	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
AMFGONCA_00902	2.28e-221	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
AMFGONCA_00903	4.13e-255	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
AMFGONCA_00904	0.0	carB1	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
AMFGONCA_00905	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
AMFGONCA_00906	2.06e-88	-	-	-	-	-	-	-	-
AMFGONCA_00907	1.15e-204	-	-	-	S	-	-	-	EDD domain protein, DegV family
AMFGONCA_00908	7e-74	mutS1	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
AMFGONCA_00909	1.22e-277	mutS1	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
AMFGONCA_00910	1.24e-258	xerS	-	-	L	ko:K03733	-	ko00000,ko03036	Belongs to the 'phage' integrase family
AMFGONCA_00911	3.03e-90	-	-	-	-	-	-	-	-
AMFGONCA_00912	4.36e-142	XK27_00160	-	-	S	-	-	-	Domain of unknown function (DUF5052)
AMFGONCA_00913	4.08e-270	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
AMFGONCA_00914	7.55e-53	-	-	-	S	-	-	-	Transglycosylase associated protein
AMFGONCA_00915	3.93e-219	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
AMFGONCA_00916	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AMFGONCA_00917	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
AMFGONCA_00918	5.42e-67	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AMFGONCA_00919	6.25e-268	camS	-	-	S	-	-	-	sex pheromone
AMFGONCA_00920	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AMFGONCA_00921	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
AMFGONCA_00922	3.29e-127	acmA	3.2.1.17, 3.2.1.96	-	NU	ko:K01185,ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	mannosyl-glycoprotein
AMFGONCA_00924	1.3e-109	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
AMFGONCA_00925	5.48e-173	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
AMFGONCA_00926	0.0	epsU	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
AMFGONCA_00927	9.16e-287	-	-	-	M	-	-	-	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
AMFGONCA_00928	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
AMFGONCA_00929	2.7e-258	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
AMFGONCA_00930	1.91e-195	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
AMFGONCA_00931	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AMFGONCA_00932	2.94e-261	-	-	-	M	-	-	-	Glycosyl transferases group 1
AMFGONCA_00933	2.13e-171	tagA	2.4.1.187	GT26	F	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
AMFGONCA_00936	3.68e-40	-	-	-	-	-	-	-	-
AMFGONCA_00938	5.06e-141	-	-	-	S	-	-	-	Baseplate J-like protein
AMFGONCA_00939	7.13e-41	-	-	-	-	-	-	-	-
AMFGONCA_00940	9.53e-48	-	-	-	-	-	-	-	-
AMFGONCA_00941	1.87e-127	-	-	-	-	-	-	-	-
AMFGONCA_00942	9.82e-61	-	-	-	-	-	-	-	-
AMFGONCA_00943	7.64e-54	-	-	-	M	-	-	-	LysM domain
AMFGONCA_00944	3.88e-276	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
AMFGONCA_00947	5.24e-38	-	-	-	-	-	-	-	-
AMFGONCA_00948	4.55e-127	-	-	-	S	-	-	-	Protein of unknown function (DUF3383)
AMFGONCA_00950	5.58e-34	-	-	-	-	-	-	-	-
AMFGONCA_00951	2.42e-23	-	-	-	-	-	-	-	-
AMFGONCA_00953	5.88e-118	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2184)
AMFGONCA_00955	1.1e-83	-	-	-	S	ko:K09960	-	ko00000	Uncharacterized protein conserved in bacteria (DUF2213)
AMFGONCA_00957	7.9e-55	-	-	-	S	-	-	-	Phage Mu protein F like protein
AMFGONCA_00958	4.77e-165	-	-	-	S	ko:K09961	-	ko00000	Protein of unknown function (DUF1073)
AMFGONCA_00959	9.67e-251	-	-	-	S	-	-	-	Terminase-like family
AMFGONCA_00960	2.21e-13	-	-	-	L	ko:K07474	-	ko00000	Terminase small subunit
AMFGONCA_00966	1.32e-273	XK27_11280	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
AMFGONCA_00974	4.02e-140	-	-	-	L	-	-	-	Helix-turn-helix domain
AMFGONCA_00975	5.44e-168	-	-	-	S	-	-	-	ERF superfamily
AMFGONCA_00976	6.7e-163	-	-	-	S	-	-	-	Protein of unknown function (DUF1351)
AMFGONCA_00977	1.07e-58	-	-	-	-	-	-	-	-
AMFGONCA_00979	2.12e-24	-	-	-	-	-	-	-	-
AMFGONCA_00980	4.49e-42	-	-	-	S	-	-	-	Helix-turn-helix domain
AMFGONCA_00986	1.38e-121	-	-	-	S	-	-	-	DNA binding
AMFGONCA_00987	2.18e-24	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
AMFGONCA_00988	3.24e-24	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
AMFGONCA_00990	7.72e-09	-	-	-	M	-	-	-	Host cell surface-exposed lipoprotein
AMFGONCA_00992	2.22e-113	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
AMFGONCA_00993	4.29e-54	-	-	-	U	ko:K03205	ko03070,map03070	ko00000,ko00001,ko00002,ko02044	TraM recognition site of TraD and TraG
AMFGONCA_00998	6.48e-10	-	-	-	M	-	-	-	oxidoreductase activity
AMFGONCA_01000	2.63e-25	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
AMFGONCA_01006	2.59e-10	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
AMFGONCA_01013	3.16e-34	-	-	-	S	-	-	-	Domain of unknown function (DUF771)
AMFGONCA_01014	4.02e-17	-	-	-	-	-	-	-	-
AMFGONCA_01016	2.13e-14	-	-	-	S	-	-	-	Arc-like DNA binding domain
AMFGONCA_01018	2.14e-40	-	-	-	K	-	-	-	Helix-turn-helix domain
AMFGONCA_01019	6.74e-30	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix domain
AMFGONCA_01020	6.66e-31	-	-	-	K	-	-	-	Helix-turn-helix domain
AMFGONCA_01022	3.73e-194	int3	-	-	L	-	-	-	Belongs to the 'phage' integrase family
AMFGONCA_01024	1.07e-281	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AMFGONCA_01025	9.87e-238	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
AMFGONCA_01026	3.69e-30	-	-	-	-	-	-	-	-
AMFGONCA_01027	1.94e-100	-	-	-	U	ko:K02248	-	ko00000,ko00002,ko02044	Putative Competence protein ComGF
AMFGONCA_01028	1.68e-55	-	-	-	-	-	-	-	-
AMFGONCA_01029	8.19e-91	-	-	-	-	ko:K02246	-	ko00000,ko00002,ko02044	-
AMFGONCA_01030	7.88e-63	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	competence protein ComGC
AMFGONCA_01031	1.72e-222	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
AMFGONCA_01032	5.04e-231	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
AMFGONCA_01033	5.65e-171	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
AMFGONCA_01034	2.33e-120	-	-	-	S	-	-	-	VanZ like family
AMFGONCA_01035	1.49e-130	ylbE	-	-	GM	-	-	-	NAD(P)H-binding
AMFGONCA_01036	3.96e-37	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AMFGONCA_01038	5.22e-131	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
AMFGONCA_01039	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
AMFGONCA_01040	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AMFGONCA_01041	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
AMFGONCA_01042	4.95e-98	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
AMFGONCA_01043	1.56e-177	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AMFGONCA_01044	3.81e-123	comX	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	Belongs to the sigma-70 factor family
AMFGONCA_01045	1.19e-45	-	-	-	-	-	-	-	-
AMFGONCA_01046	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
AMFGONCA_01047	1.52e-87	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AMFGONCA_01048	1.34e-310	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AMFGONCA_01049	3.73e-33	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
AMFGONCA_01050	1.23e-130	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
AMFGONCA_01051	3.82e-90	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
AMFGONCA_01052	1.05e-160	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
AMFGONCA_01053	5.48e-201	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
AMFGONCA_01054	2.29e-210	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
AMFGONCA_01055	3.01e-197	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
AMFGONCA_01056	5.24e-187	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
AMFGONCA_01057	3.83e-178	pstB1	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
AMFGONCA_01058	1.37e-149	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
AMFGONCA_01059	5.61e-118	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMFGONCA_01061	3.72e-111	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
AMFGONCA_01062	1.61e-72	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
AMFGONCA_01063	2.67e-188	-	2.1.1.172	-	J	ko:K00564,ko:K10716	-	ko00000,ko01000,ko02000,ko03009	Ion channel
AMFGONCA_01064	1.24e-91	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
AMFGONCA_01065	1.58e-33	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
AMFGONCA_01066	6.15e-36	-	-	-	-	-	-	-	-
AMFGONCA_01067	7.05e-103	-	-	-	L	-	-	-	COG3385 FOG Transposase and inactivated derivatives
AMFGONCA_01068	1.37e-219	-	-	-	GK	-	-	-	ROK family
AMFGONCA_01069	2.53e-56	-	-	-	-	-	-	-	-
AMFGONCA_01070	0.0	-	-	-	S	ko:K06885	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
AMFGONCA_01071	1.75e-89	-	-	-	S	-	-	-	Domain of unknown function (DUF1934)
AMFGONCA_01072	2.38e-88	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
AMFGONCA_01073	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
AMFGONCA_01074	1.89e-312	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AMFGONCA_01075	7.28e-97	-	-	-	K	-	-	-	acetyltransferase
AMFGONCA_01076	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
AMFGONCA_01077	2.07e-196	msmR	-	-	K	-	-	-	AraC-like ligand binding domain
AMFGONCA_01078	8.34e-294	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
AMFGONCA_01079	9.63e-136	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
AMFGONCA_01080	1.1e-54	-	-	-	K	-	-	-	Helix-turn-helix
AMFGONCA_01081	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
AMFGONCA_01083	1.89e-129	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
AMFGONCA_01084	4.06e-147	-	-	-	M	-	-	-	Rib/alpha-like repeat
AMFGONCA_01085	1.38e-225	-	-	-	M	-	-	-	Rib/alpha-like repeat
AMFGONCA_01086	1.82e-05	-	-	-	-	-	-	-	-
AMFGONCA_01087	1.94e-96	-	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	UbiA prenyltransferase family
AMFGONCA_01088	3.74e-125	-	-	-	-	-	-	-	-
AMFGONCA_01090	1.16e-101	-	-	-	-	-	-	-	-
AMFGONCA_01091	1.58e-143	-	-	-	S	-	-	-	Peptidase_C39 like family
AMFGONCA_01092	7.36e-109	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
AMFGONCA_01093	7.35e-174	-	-	-	S	-	-	-	Putative threonine/serine exporter
AMFGONCA_01094	0.0	-	-	-	S	-	-	-	ABC transporter
AMFGONCA_01095	2.52e-76	-	-	-	-	-	-	-	-
AMFGONCA_01096	1.9e-126	rimL	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
AMFGONCA_01097	6.04e-26	-	-	-	-	-	-	-	-
AMFGONCA_01098	3.75e-79	-	-	-	-	-	-	-	-
AMFGONCA_01099	1.39e-160	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
AMFGONCA_01100	3.81e-275	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
AMFGONCA_01101	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
AMFGONCA_01102	8.61e-54	-	-	-	S	-	-	-	Enterocin A Immunity
AMFGONCA_01103	1.71e-172	-	-	-	S	ko:K07052	-	ko00000	CAAX amino terminal protease
AMFGONCA_01107	6.21e-60	-	-	-	V	ko:K20345	ko02024,map02024	ko00000,ko00001,ko02000	HlyD family secretion protein
AMFGONCA_01108	0.0	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
AMFGONCA_01109	1.64e-101	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
AMFGONCA_01110	4.9e-99	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
AMFGONCA_01111	2e-90	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMFGONCA_01112	2.34e-107	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMFGONCA_01114	3.98e-116	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
AMFGONCA_01115	2.29e-274	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
AMFGONCA_01117	4.7e-163	pgm	-	-	G	-	-	-	Phosphoglycerate mutase family
AMFGONCA_01118	2.7e-147	-	-	-	S	-	-	-	repeat protein
AMFGONCA_01119	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
AMFGONCA_01120	0.0	-	-	-	L	-	-	-	Nuclease-related domain
AMFGONCA_01121	1.11e-234	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
AMFGONCA_01122	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AMFGONCA_01123	9e-46	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
AMFGONCA_01124	9.73e-132	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
AMFGONCA_01125	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
AMFGONCA_01126	9.6e-269	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
AMFGONCA_01127	9.94e-71	ylbG	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2129)
AMFGONCA_01128	2.12e-125	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
AMFGONCA_01129	2.88e-106	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
AMFGONCA_01130	1.16e-243	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
AMFGONCA_01131	2.7e-126	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
AMFGONCA_01132	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
AMFGONCA_01133	2.57e-226	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
AMFGONCA_01134	6.28e-47	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
AMFGONCA_01135	7.11e-57	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
AMFGONCA_01136	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AMFGONCA_01137	2.44e-285	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AMFGONCA_01138	0.0	potE	-	-	E	-	-	-	Amino Acid
AMFGONCA_01139	2.65e-107	-	-	-	S	-	-	-	Fic/DOC family
AMFGONCA_01140	1.66e-227	-	-	-	-	-	-	-	-
AMFGONCA_01141	1.65e-125	-	-	-	-	-	-	-	-
AMFGONCA_01142	5.87e-110	-	-	-	-	-	-	-	-
AMFGONCA_01143	1.92e-113	yhaH	-	-	S	-	-	-	Protein of unknown function (DUF805)
AMFGONCA_01144	2.65e-89	-	-	-	O	-	-	-	OsmC-like protein
AMFGONCA_01145	5.3e-264	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
AMFGONCA_01146	3e-290	sptS	-	-	T	-	-	-	Histidine kinase
AMFGONCA_01147	2.14e-85	dltr	-	-	K	-	-	-	response regulator
AMFGONCA_01148	4.52e-35	dltr	-	-	K	-	-	-	response regulator
AMFGONCA_01149	6.17e-140	-	-	-	T	-	-	-	Region found in RelA / SpoT proteins
AMFGONCA_01150	0.0	gtfA	2.4.1.7	GH13	G	ko:K00690	ko00500,map00500	ko00000,ko00001,ko01000	Sucrose glucosyltransferase
AMFGONCA_01151	0.0	melA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
AMFGONCA_01152	1.72e-268	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
AMFGONCA_01153	1.02e-195	-	-	-	P	ko:K10119	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
AMFGONCA_01154	8.41e-202	msmF	-	-	P	ko:K10118	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
AMFGONCA_01155	1.52e-300	msmE	-	-	G	ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
AMFGONCA_01156	3.13e-206	-	-	-	K	ko:K03484	-	ko00000,ko03000	Periplasmic binding protein domain
AMFGONCA_01157	2.14e-48	-	-	-	-	-	-	-	-
AMFGONCA_01158	8.29e-254	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
AMFGONCA_01159	3.54e-123	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMFGONCA_01161	4.94e-309	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
AMFGONCA_01162	8.12e-60	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
AMFGONCA_01163	0.0	sufB	-	-	O	ko:K07033,ko:K09014	-	ko00000	assembly protein SufB
AMFGONCA_01164	6.98e-78	nifU	-	-	C	ko:K04488	-	ko00000	SUF system FeS assembly protein, NifU family
AMFGONCA_01165	1.39e-224	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AMFGONCA_01166	6.22e-232	sufD	-	-	O	ko:K07033,ko:K09015	-	ko00000	FeS assembly protein SufD
AMFGONCA_01167	3.64e-178	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	FeS assembly ATPase SufC
AMFGONCA_01168	1.51e-154	-	-	-	C	-	-	-	2Fe-2S iron-sulfur cluster binding domain
AMFGONCA_01169	1.24e-188	-	5.2.1.13	-	Q	ko:K09835	ko00906,ko01100,ko01110,map00906,map01100,map01110	ko00000,ko00001,ko00002,ko01000	HI0933-like protein
AMFGONCA_01170	7.13e-67	-	-	-	K	-	-	-	helix_turn_helix gluconate operon transcriptional repressor
AMFGONCA_01171	1.9e-228	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
AMFGONCA_01172	2.36e-213	adh2	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
AMFGONCA_01173	2.24e-71	ykoJ	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
AMFGONCA_01174	1.23e-175	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMFGONCA_01176	7.14e-170	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AMFGONCA_01177	3.05e-110	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin synthase
AMFGONCA_01178	3.61e-288	ribBA	3.5.4.25, 4.1.99.12	-	H	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
AMFGONCA_01179	1.91e-103	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
AMFGONCA_01180	1.32e-114	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
AMFGONCA_01181	1.16e-13	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
AMFGONCA_01182	0.0	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
AMFGONCA_01183	4.2e-249	pbpX1	-	-	V	-	-	-	Beta-lactamase
AMFGONCA_01184	1.05e-253	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AMFGONCA_01185	2.22e-277	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
AMFGONCA_01186	6.89e-185	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
AMFGONCA_01187	3.01e-224	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AMFGONCA_01188	1.4e-281	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
AMFGONCA_01189	1.22e-104	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
AMFGONCA_01190	5.89e-314	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
AMFGONCA_01191	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
AMFGONCA_01192	6.25e-246	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
AMFGONCA_01193	1.36e-154	potE	-	-	E	-	-	-	Amino Acid
AMFGONCA_01194	1.24e-57	potE	-	-	E	-	-	-	Amino acid permease
AMFGONCA_01195	2.06e-46	potE	-	-	E	-	-	-	Amino Acid
AMFGONCA_01196	3.9e-137	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
AMFGONCA_01197	8.72e-297	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AMFGONCA_01198	4.43e-292	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
AMFGONCA_01199	4.06e-287	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AMFGONCA_01200	1.98e-193	-	-	-	-	-	-	-	-
AMFGONCA_01201	8.49e-85	-	-	-	E	-	-	-	amino acid
AMFGONCA_01202	6.08e-161	yagE	-	-	E	-	-	-	Amino acid permease
AMFGONCA_01203	9.58e-112	-	3.4.21.96	-	S	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	SLAP domain
AMFGONCA_01204	3.17e-203	XK27_10395	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AMFGONCA_01205	5.13e-287	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
AMFGONCA_01206	1.8e-143	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
AMFGONCA_01207	8.63e-191	degV3	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
AMFGONCA_01208	9.85e-49	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
AMFGONCA_01209	3.67e-88	-	-	-	P	-	-	-	NhaP-type Na H and K H
AMFGONCA_01210	7.56e-48	nhaP4	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
AMFGONCA_01211	2.4e-118	nhaP4	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
AMFGONCA_01212	2.15e-198	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
AMFGONCA_01213	1e-168	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AMFGONCA_01214	1.5e-195	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
AMFGONCA_01215	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AMFGONCA_01216	8.35e-315	trmFO	2.1.1.74	-	J	ko:K04094	-	ko00000,ko01000,ko03016,ko03036	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
AMFGONCA_01217	5.99e-180	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Phage integrase, N-terminal SAM-like domain
AMFGONCA_01218	4.67e-116	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
AMFGONCA_01219	1.4e-313	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
AMFGONCA_01220	9.4e-232	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
AMFGONCA_01221	6.42e-110	-	-	-	C	-	-	-	Aldo keto reductase
AMFGONCA_01222	8.85e-121	-	-	-	M	-	-	-	LysM domain protein
AMFGONCA_01223	2.7e-79	-	-	-	-	-	-	-	-
AMFGONCA_01225	4.14e-251	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
AMFGONCA_01226	9.95e-59	noxC	1.5.1.39	-	C	ko:K19286	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	coenzyme F420-1:gamma-L-glutamate ligase activity
AMFGONCA_01227	3.57e-29	noxC	1.5.1.39	-	C	ko:K19286	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	coenzyme F420-1:gamma-L-glutamate ligase activity
AMFGONCA_01228	4.15e-232	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AMFGONCA_01229	8.37e-161	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
AMFGONCA_01230	2.62e-176	-	-	-	-	-	-	-	-
AMFGONCA_01231	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
AMFGONCA_01232	5.01e-171	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
AMFGONCA_01233	7.36e-291	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
AMFGONCA_01234	2.43e-263	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
AMFGONCA_01235	2.01e-163	-	-	-	-	-	-	-	-
AMFGONCA_01236	1.69e-258	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
AMFGONCA_01237	7.8e-167	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
AMFGONCA_01238	2.82e-201	-	-	-	I	-	-	-	alpha/beta hydrolase fold
AMFGONCA_01239	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 31 family
AMFGONCA_01240	1.78e-276	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AMFGONCA_01241	4.19e-10	-	-	-	-	ko:K07473	-	ko00000,ko02048	-
AMFGONCA_01243	3.92e-153	-	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
AMFGONCA_01244	1.37e-287	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
AMFGONCA_01245	2.26e-31	-	-	-	S	-	-	-	Transglycosylase associated protein
AMFGONCA_01246	3.81e-18	-	-	-	S	-	-	-	CsbD-like
AMFGONCA_01247	4.76e-213	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
AMFGONCA_01248	6.11e-171	-	-	-	V	-	-	-	ABC transporter transmembrane region
AMFGONCA_01249	2.36e-217	degV1	-	-	S	-	-	-	DegV family
AMFGONCA_01250	5.56e-217	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, phosphonate, periplasmic substrate-binding protein
AMFGONCA_01251	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
AMFGONCA_01252	3.87e-97	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
AMFGONCA_01253	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
AMFGONCA_01254	1.89e-47	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AMFGONCA_01255	4.83e-104	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
AMFGONCA_01256	2.74e-65	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
AMFGONCA_01257	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AMFGONCA_01258	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AMFGONCA_01259	9.94e-266	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AMFGONCA_01260	1.13e-48	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain protein YaaA
AMFGONCA_01261	1.19e-106	-	-	-	EGP	-	-	-	Major Facilitator
AMFGONCA_01262	7.95e-250	ampC	-	-	V	-	-	-	Beta-lactamase
AMFGONCA_01265	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Domain of unknown function (DUF1727)
AMFGONCA_01266	7.02e-146	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
AMFGONCA_01267	6.6e-237	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
AMFGONCA_01268	1.24e-198	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
AMFGONCA_01269	1.66e-243	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
AMFGONCA_01270	4.34e-145	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
AMFGONCA_01271	5.87e-166	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
AMFGONCA_01272	4.83e-37	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AMFGONCA_01273	2.48e-83	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
AMFGONCA_01274	5.38e-119	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AMFGONCA_01275	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
AMFGONCA_01276	1.48e-221	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
AMFGONCA_01277	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
AMFGONCA_01278	2.45e-93	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
AMFGONCA_01279	2.54e-42	-	-	-	S	-	-	-	Protein of unknown function (DUF1146)
AMFGONCA_01280	4.81e-227	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
AMFGONCA_01281	1.59e-68	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
AMFGONCA_01282	5.13e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
AMFGONCA_01283	1.18e-275	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
AMFGONCA_01284	9.45e-104	uspA	-	-	T	-	-	-	universal stress protein
AMFGONCA_01285	1.35e-56	-	-	-	-	-	-	-	-
AMFGONCA_01286	1.47e-302	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
AMFGONCA_01287	8.08e-110	-	-	-	S	-	-	-	Protein of unknown function (DUF1694)
AMFGONCA_01288	3.07e-142	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
AMFGONCA_01289	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
AMFGONCA_01290	1.13e-272	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
AMFGONCA_01291	2.35e-286	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AMFGONCA_01292	2.1e-232	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
AMFGONCA_01293	6.01e-153	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
AMFGONCA_01294	3.97e-57	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
AMFGONCA_01295	1.06e-86	-	-	-	S	-	-	-	GtrA-like protein
AMFGONCA_01296	5.55e-216	yfdH	-	GT2	M	ko:K12999	-	ko00000,ko01000,ko01003,ko01005	Glycosyltransferase, group 2 family protein
AMFGONCA_01297	3.33e-123	-	-	-	S	-	-	-	Protein of unknown function (DUF3990)
AMFGONCA_01298	2.09e-59	-	-	-	-	-	-	-	-
AMFGONCA_01299	9.25e-13	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
AMFGONCA_01300	0.0	yoaB	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
AMFGONCA_01301	1.41e-164	-	-	-	S	ko:K06926	-	ko00000	AAA domain, putative AbiEii toxin, Type IV TA system
AMFGONCA_01302	2.91e-67	-	-	-	-	-	-	-	-
AMFGONCA_01303	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
AMFGONCA_01304	1.22e-306	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
AMFGONCA_01305	1.06e-162	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
AMFGONCA_01306	6.18e-150	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
AMFGONCA_01307	8.26e-226	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
AMFGONCA_01308	8.27e-189	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
AMFGONCA_01309	5.43e-122	mreD	-	-	-	ko:K03571	-	ko00000,ko03036	-
AMFGONCA_01310	1.4e-09	-	-	-	S	-	-	-	Protein of unknown function (DUF4044)
AMFGONCA_01311	1.02e-72	-	-	-	S	-	-	-	Protein of unknown function (DUF3397)
AMFGONCA_01312	5.63e-102	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
AMFGONCA_01313	8.61e-223	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
AMFGONCA_01314	6.55e-72	ftsL	-	-	D	-	-	-	Cell division protein FtsL
AMFGONCA_01315	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
AMFGONCA_01316	4.43e-224	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AMFGONCA_01317	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AMFGONCA_01318	1.65e-265	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AMFGONCA_01319	3.14e-194	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
AMFGONCA_01320	5.47e-314	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
AMFGONCA_01321	2.52e-300	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AMFGONCA_01322	1.43e-96	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
AMFGONCA_01323	2.42e-60	yggT	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
AMFGONCA_01324	1.9e-190	ylmH	-	-	S	-	-	-	S4 domain protein
AMFGONCA_01325	3.63e-137	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
AMFGONCA_01326	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AMFGONCA_01327	9.48e-43	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
AMFGONCA_01328	1.27e-134	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
AMFGONCA_01329	6.03e-56	-	-	-	-	-	-	-	-
AMFGONCA_01330	2.05e-163	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AMFGONCA_01331	1.33e-275	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
AMFGONCA_01332	2.97e-76	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
AMFGONCA_01333	7.72e-279	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
AMFGONCA_01334	3.42e-30	-	-	-	S	-	-	-	HicA toxin of bacterial toxin-antitoxin,
AMFGONCA_01335	1.23e-313	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AMFGONCA_01336	0.0	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AMFGONCA_01337	6.69e-239	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
AMFGONCA_01340	1.84e-263	-	4.2.1.126	-	S	ko:K07106,ko:K09963	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Bacterial protein of unknown function (DUF871)
AMFGONCA_01341	5.12e-242	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
AMFGONCA_01342	6.45e-291	-	-	-	E	-	-	-	amino acid
AMFGONCA_01343	6.65e-179	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
AMFGONCA_01345	1.95e-221	-	-	-	V	-	-	-	HNH endonuclease
AMFGONCA_01346	6.36e-173	-	-	-	S	-	-	-	PFAM Archaeal ATPase
AMFGONCA_01347	5.27e-314	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
AMFGONCA_01348	2.58e-310	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
AMFGONCA_01349	5.08e-149	sipS3	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
AMFGONCA_01350	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	AAA domain (Cdc48 subfamily)
AMFGONCA_01351	7.86e-212	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
AMFGONCA_01352	2.82e-17	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
AMFGONCA_01353	2.73e-21	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
AMFGONCA_01354	1.18e-48	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	Bacterial toxin of type II toxin-antitoxin system, YafQ
AMFGONCA_01355	3.48e-105	-	-	-	V	-	-	-	Type I restriction modification DNA specificity domain
AMFGONCA_01356	5.44e-299	-	-	-	V	-	-	-	N-6 DNA Methylase
AMFGONCA_01357	3.89e-128	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMFGONCA_01358	1.71e-156	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
AMFGONCA_01359	7.98e-35	-	-	-	GKT	-	-	-	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AMFGONCA_01360	4.68e-25	-	2.7.1.200	-	G	ko:K02774	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
AMFGONCA_01361	8.24e-257	-	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
AMFGONCA_01362	7.62e-32	-	2.7.1.200	-	G	ko:K02773	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AMFGONCA_01364	1.78e-21	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMFGONCA_01365	5.85e-67	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMFGONCA_01367	1.54e-87	doc	-	-	S	ko:K07341	-	ko00000,ko02048	Fic/DOC family
AMFGONCA_01368	2.78e-45	-	-	-	-	-	-	-	-
AMFGONCA_01370	7.63e-28	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
AMFGONCA_01372	2.62e-155	-	-	-	L	-	-	-	This gene contains a nucleotide ambiguity which may be the result of a sequencing error
AMFGONCA_01374	1.67e-143	-	-	-	-	-	-	-	-
AMFGONCA_01376	1.66e-143	-	-	-	E	-	-	-	Belongs to the SOS response-associated peptidase family
AMFGONCA_01377	1.66e-244	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
AMFGONCA_01378	4.29e-116	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	MafB19-like deaminase
AMFGONCA_01379	4.57e-135	-	-	-	S	ko:K06872	-	ko00000	TPM domain
AMFGONCA_01380	1.71e-173	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
AMFGONCA_01381	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
AMFGONCA_01382	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AMFGONCA_01383	2.72e-189	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
AMFGONCA_01384	5.17e-129	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
AMFGONCA_01385	2.56e-193	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
AMFGONCA_01386	9.99e-53	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
AMFGONCA_01387	2.91e-190	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
AMFGONCA_01388	3.12e-308	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AMFGONCA_01389	5.52e-113	-	-	-	-	-	-	-	-
AMFGONCA_01390	0.0	-	-	-	S	-	-	-	SLAP domain
AMFGONCA_01391	5.4e-226	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AMFGONCA_01392	3.46e-16	-	-	-	M	-	-	-	Rib/alpha-like repeat
AMFGONCA_01395	2.37e-194	-	-	-	S	-	-	-	Phage minor structural protein
AMFGONCA_01396	3.54e-36	-	-	-	S	-	-	-	phage tail
AMFGONCA_01397	2.4e-69	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
AMFGONCA_01398	1.69e-178	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
AMFGONCA_01403	1.42e-23	-	-	-	S	-	-	-	Bacteriophage HK97-gp10, putative tail-component
AMFGONCA_01405	1.2e-23	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
AMFGONCA_01406	7.4e-57	-	-	-	S	-	-	-	Phage capsid family
AMFGONCA_01407	2.67e-95	-	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S14 family
AMFGONCA_01408	2.91e-103	-	-	-	S	-	-	-	Phage portal protein
AMFGONCA_01409	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
AMFGONCA_01410	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
AMFGONCA_01411	4.86e-157	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
AMFGONCA_01412	5.79e-217	-	-	-	K	-	-	-	LysR substrate binding domain
AMFGONCA_01413	4.91e-111	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
AMFGONCA_01414	3.16e-52	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
AMFGONCA_01415	1.74e-293	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
AMFGONCA_01416	4e-204	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
AMFGONCA_01417	5.61e-226	hepT	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
AMFGONCA_01418	1.76e-165	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
AMFGONCA_01419	0.0	cydD	-	-	CO	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AMFGONCA_01420	0.0	cydC	-	-	CO	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
AMFGONCA_01421	7.95e-302	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
AMFGONCA_01422	9e-255	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
AMFGONCA_01423	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
AMFGONCA_01424	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
AMFGONCA_01425	9.03e-229	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
AMFGONCA_01426	4.11e-173	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
AMFGONCA_01427	1.37e-216	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
AMFGONCA_01428	3.58e-129	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
AMFGONCA_01429	3.51e-224	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
AMFGONCA_01430	1.08e-92	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
AMFGONCA_01431	4.83e-30	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
AMFGONCA_01432	6.94e-199	yqfL	2.7.11.33, 2.7.4.28	-	F	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
AMFGONCA_01433	1.34e-22	-	-	-	S	-	-	-	CRISPR-associated protein (Cas_Csn2)
AMFGONCA_01434	5.74e-285	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMFGONCA_01435	9.07e-51	-	-	-	S	-	-	-	CRISPR-associated protein (Cas_Csn2)
AMFGONCA_01436	4.67e-54	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
AMFGONCA_01437	1.44e-164	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
AMFGONCA_01438	1.17e-210	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
AMFGONCA_01439	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
AMFGONCA_01440	4.92e-43	-	-	-	L	-	-	-	Transposase DDE domain
AMFGONCA_01441	0.0	-	-	-	L	-	-	-	Transposase
AMFGONCA_01442	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AMFGONCA_01443	8.69e-96	nrdI	-	-	F	ko:K03647	-	ko00000	NrdI Flavodoxin like
AMFGONCA_01444	6.04e-249	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AMFGONCA_01445	0.0	phoR	2.7.13.3	-	T	ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
AMFGONCA_01446	7.4e-154	phoB	-	-	T	ko:K07658	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C terminal
AMFGONCA_01447	3.12e-135	-	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
AMFGONCA_01448	1.68e-177	pstB	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
AMFGONCA_01449	7.4e-196	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
AMFGONCA_01450	6.87e-202	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
AMFGONCA_01451	7.81e-186	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
AMFGONCA_01452	5.68e-34	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
AMFGONCA_01453	1.42e-101	yveB	-	-	I	-	-	-	PAP2 superfamily
AMFGONCA_01454	9.56e-33	sagD	-	-	S	-	-	-	YcaO cyclodehydratase, ATP-ad Mg2+-binding
AMFGONCA_01456	4.81e-77	-	-	-	S	-	-	-	SIR2-like domain
AMFGONCA_01457	7.36e-119	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
AMFGONCA_01458	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
AMFGONCA_01459	5.22e-54	-	-	-	S	-	-	-	RloB-like protein
AMFGONCA_01460	1.35e-208	-	-	-	S	ko:K06926	-	ko00000	AAA domain, putative AbiEii toxin, Type IV TA system
AMFGONCA_01461	0.0	hsdR	3.1.21.3	-	L	ko:K01153	-	ko00000,ko01000,ko02048	DEAD/DEAH box helicase
AMFGONCA_01462	0.0	-	-	-	S	-	-	-	SLAP domain
AMFGONCA_01464	5.93e-302	XK27_01810	-	-	S	-	-	-	Calcineurin-like phosphoesterase
AMFGONCA_01465	1.61e-80	-	-	-	S	ko:K07006	-	ko00000	Pyridoxamine 5'-phosphate oxidase
AMFGONCA_01466	9.55e-303	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
AMFGONCA_01468	4.65e-14	-	-	-	-	-	-	-	-
AMFGONCA_01469	1.42e-57	-	-	-	-	-	-	-	-
AMFGONCA_01470	7.34e-86	-	2.7.1.191	-	G	ko:K02793	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
AMFGONCA_01471	0.0	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
AMFGONCA_01472	1.82e-160	-	-	-	-	-	-	-	-
AMFGONCA_01473	1.87e-308	-	-	-	S	-	-	-	response to antibiotic
AMFGONCA_01474	7.53e-163	gpm2	-	-	G	-	-	-	Phosphoglycerate mutase family
AMFGONCA_01475	1.19e-147	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
AMFGONCA_01476	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
AMFGONCA_01477	3e-139	yecS_2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
AMFGONCA_01478	1.97e-135	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
AMFGONCA_01479	7.09e-184	aatB	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
AMFGONCA_01480	1.36e-96	yjcF	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
AMFGONCA_01481	1.88e-125	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
AMFGONCA_01482	7.92e-218	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
AMFGONCA_01483	1.48e-134	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AMFGONCA_01484	1.24e-75	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
AMFGONCA_01485	0.0	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
AMFGONCA_01486	2.09e-129	treR	-	-	K	ko:K03486	-	ko00000,ko03000	UTRA
AMFGONCA_01487	0.0	treB	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
AMFGONCA_01488	2.76e-86	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
AMFGONCA_01489	1.13e-241	-	-	-	L	ko:K07478	-	ko00000	AAA C-terminal domain
AMFGONCA_01490	0.0	yqjE	3.4.11.14, 3.4.11.4	-	E	ko:K01258,ko:K01263	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
AMFGONCA_01491	5.74e-108	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
AMFGONCA_01492	1.87e-290	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
AMFGONCA_01493	2.26e-123	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
AMFGONCA_01494	3.1e-127	pdxK	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
AMFGONCA_01495	1.59e-259	pbpX1	-	-	V	-	-	-	Beta-lactamase
AMFGONCA_01496	1.12e-149	maa3	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
AMFGONCA_01497	1.12e-104	yvbK	-	-	K	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
AMFGONCA_01498	4e-261	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
AMFGONCA_01499	2.07e-38	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
AMFGONCA_01502	0.0	-	-	-	L	-	-	-	Transposase
AMFGONCA_01503	0.0	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
AMFGONCA_01504	5.24e-194	-	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AMFGONCA_01505	6.82e-66	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
AMFGONCA_01506	3.94e-64	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
AMFGONCA_01507	2.14e-257	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
AMFGONCA_01508	2.11e-133	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AMFGONCA_01509	7.98e-93	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
AMFGONCA_01510	3.38e-86	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AMFGONCA_01511	8.47e-182	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
AMFGONCA_01512	8.84e-238	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
AMFGONCA_01513	4.4e-47	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
AMFGONCA_01514	4.47e-196	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
AMFGONCA_01515	1.83e-190	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
AMFGONCA_01516	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
AMFGONCA_01517	2.19e-100	-	-	-	S	-	-	-	ASCH
AMFGONCA_01518	5.97e-145	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
AMFGONCA_01519	2.37e-46	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
AMFGONCA_01520	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AMFGONCA_01521	5.15e-219	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AMFGONCA_01522	7.82e-311	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AMFGONCA_01523	3.28e-179	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
AMFGONCA_01524	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
AMFGONCA_01525	1.03e-209	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
AMFGONCA_01526	2.61e-154	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
AMFGONCA_01527	3.84e-160	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
AMFGONCA_01528	3.12e-41	-	-	-	-	-	-	-	-
AMFGONCA_01529	1.33e-35	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
AMFGONCA_01530	8.29e-75	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
AMFGONCA_01531	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
AMFGONCA_01532	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AMFGONCA_01533	3.69e-233	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
AMFGONCA_01534	1.48e-45	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AMFGONCA_01535	5.15e-247	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
AMFGONCA_01536	5.41e-228	oppF	-	-	P	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
AMFGONCA_01537	1.6e-220	oppB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
AMFGONCA_01538	1.18e-177	oppC5	-	-	P	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
AMFGONCA_01539	2.26e-148	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
AMFGONCA_01540	5.76e-144	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
AMFGONCA_01541	1.21e-19	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
AMFGONCA_01542	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
AMFGONCA_01543	8.03e-160	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
AMFGONCA_01544	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
AMFGONCA_01545	3.78e-230	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
AMFGONCA_01546	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
AMFGONCA_01547	1.69e-06	-	-	-	-	-	-	-	-
AMFGONCA_01548	2.1e-31	-	-	-	-	-	-	-	-
AMFGONCA_01549	5.41e-172	cysA	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
AMFGONCA_01550	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
AMFGONCA_01551	2.88e-105	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
AMFGONCA_01552	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
AMFGONCA_01553	2.19e-49	-	-	-	S	-	-	-	Alpha beta hydrolase
AMFGONCA_01554	2.1e-82	-	-	-	S	-	-	-	Alpha beta hydrolase
AMFGONCA_01555	8.51e-50	-	-	-	-	-	-	-	-
AMFGONCA_01556	4.33e-69	-	-	-	-	-	-	-	-
AMFGONCA_01557	6.92e-145	supH	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
AMFGONCA_01558	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
AMFGONCA_01559	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
AMFGONCA_01560	1.82e-86	yusI	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	Belongs to the ArsC family
AMFGONCA_01561	3.02e-228	lipA	-	-	I	-	-	-	Carboxylesterase family
AMFGONCA_01563	5.27e-266	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
AMFGONCA_01564	2.99e-202	cinI	-	-	S	ko:K06889	-	ko00000	Serine hydrolase (FSH1)
AMFGONCA_01565	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2207)
AMFGONCA_01566	6.82e-223	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
AMFGONCA_01567	6.84e-183	-	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
AMFGONCA_01568	3.57e-47	-	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
AMFGONCA_01569	5.14e-38	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
AMFGONCA_01570	0.0	yfkN	3.1.3.6, 3.1.4.16	-	F	ko:K01119	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
AMFGONCA_01571	1.25e-38	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
AMFGONCA_01572	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
AMFGONCA_01573	5.46e-233	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
AMFGONCA_01574	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
AMFGONCA_01575	1.21e-213	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
AMFGONCA_01576	6.74e-213	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
AMFGONCA_01577	7.97e-82	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
AMFGONCA_01578	1.81e-169	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
AMFGONCA_01579	7.57e-135	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
AMFGONCA_01580	4.65e-168	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
AMFGONCA_01582	1.35e-71	ytpP	-	-	CO	-	-	-	Thioredoxin
AMFGONCA_01583	4.18e-155	XK27_10290	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
AMFGONCA_01584	2.05e-248	-	-	-	-	-	-	-	-
AMFGONCA_01585	3.8e-315	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
AMFGONCA_01586	3.31e-299	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
AMFGONCA_01587	7.29e-220	-	-	-	S	-	-	-	SLAP domain
AMFGONCA_01588	4.2e-93	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
AMFGONCA_01589	4.5e-107	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
AMFGONCA_01590	9.84e-108	-	-	-	L	-	-	-	Resolvase, N-terminal
AMFGONCA_01591	1.86e-197	-	-	-	M	-	-	-	Peptidase family M1 domain
AMFGONCA_01592	2.97e-244	-	-	-	S	-	-	-	Bacteriocin helveticin-J
AMFGONCA_01593	2.39e-26	-	-	-	-	-	-	-	-
AMFGONCA_01594	1.8e-66	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
AMFGONCA_01595	2.27e-191	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
AMFGONCA_01596	1.62e-250	purD	6.3.4.13	-	F	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the GARS family
AMFGONCA_01597	5.03e-76	-	-	-	K	-	-	-	Helix-turn-helix domain
AMFGONCA_01598	1.17e-144	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AMFGONCA_01599	1.05e-221	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
AMFGONCA_01600	1.11e-234	-	-	-	K	-	-	-	Transcriptional regulator
AMFGONCA_01601	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
AMFGONCA_01602	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
AMFGONCA_01603	9.39e-141	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
AMFGONCA_01604	0.0	snf	-	-	KL	-	-	-	domain protein
AMFGONCA_01605	1.73e-48	-	-	-	-	-	-	-	-
AMFGONCA_01606	1.24e-08	-	-	-	-	-	-	-	-
AMFGONCA_01607	4.83e-136	pncA	-	-	Q	-	-	-	Isochorismatase family
AMFGONCA_01608	4.63e-32	-	-	-	-	-	-	-	-
AMFGONCA_01609	6.72e-177	-	-	-	EP	-	-	-	Plasmid replication protein
AMFGONCA_01610	1.67e-101	-	-	-	S	-	-	-	helix_turn_helix, Deoxyribose operon repressor
AMFGONCA_01611	6.33e-221	ulaG	-	-	S	ko:K03476	ko00053,ko01100,ko01120,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Beta-lactamase superfamily domain
AMFGONCA_01612	4.93e-80	-	2.7.1.194	-	G	ko:K02821	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AMFGONCA_01613	1.14e-293	sgaT	-	-	S	ko:K03475	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
AMFGONCA_01614	4.82e-42	ulaB	2.7.1.194	-	G	ko:K02822	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
AMFGONCA_01615	2.85e-115	ulaD	4.1.1.85, 4.1.2.43	-	G	ko:K03078,ko:K08093	ko00030,ko00040,ko00053,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00040,map00053,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Orotidine 5'-phosphate decarboxylase / HUMPS family
AMFGONCA_01616	1.78e-163	sga	5.1.3.22	-	G	ko:K03079	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Xylose isomerase-like TIM barrel
AMFGONCA_01617	1.52e-157	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
AMFGONCA_01618	5.85e-86	nt5e	3.1.3.18	-	L	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	haloacid dehalogenase-like hydrolase
AMFGONCA_01619	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
AMFGONCA_01620	1.01e-22	-	-	-	L	-	-	-	Transposase
AMFGONCA_01621	7.51e-16	-	-	-	L	-	-	-	Transposase
AMFGONCA_01622	1.41e-71	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
AMFGONCA_01624	9.14e-283	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
AMFGONCA_01626	3.82e-276	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AMFGONCA_01627	1.19e-43	-	-	-	S	-	-	-	reductase
AMFGONCA_01628	2.98e-50	-	-	-	S	-	-	-	reductase
AMFGONCA_01629	6.32e-41	-	-	-	S	-	-	-	reductase
AMFGONCA_01630	2.13e-189	yxeH	-	-	S	-	-	-	hydrolase
AMFGONCA_01631	1.14e-230	gyaR	1.1.1.26, 1.1.1.399, 1.1.1.95	-	CH	ko:K00015,ko:K00058	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AMFGONCA_01632	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
AMFGONCA_01633	1.58e-140	yngC	-	-	S	-	-	-	SNARE associated Golgi protein
AMFGONCA_01634	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
AMFGONCA_01635	1.88e-309	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
AMFGONCA_01636	0.0	oatA	-	-	I	-	-	-	Acyltransferase
AMFGONCA_01640	1.3e-282	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AMFGONCA_01641	1.26e-223	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
AMFGONCA_01642	3.01e-54	-	-	-	-	-	-	-	-
AMFGONCA_01643	1.73e-167	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
AMFGONCA_01644	1.28e-174	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
AMFGONCA_01645	4.39e-116	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
AMFGONCA_01646	2.11e-115	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase homologues.
AMFGONCA_01647	4.52e-56	-	-	-	-	-	-	-	-
AMFGONCA_01648	0.0	-	-	-	S	-	-	-	O-antigen ligase like membrane protein
AMFGONCA_01649	8.77e-144	-	-	-	-	-	-	-	-
AMFGONCA_01650	1.15e-284	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
AMFGONCA_01651	8.66e-39	nrdI	-	-	F	ko:K03647	-	ko00000	NrdI Flavodoxin like
AMFGONCA_01652	1.96e-226	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AMFGONCA_01653	0.0	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
AMFGONCA_01654	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
AMFGONCA_01655	0.0	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
AMFGONCA_01656	5.18e-109	-	-	-	-	-	-	-	-
AMFGONCA_01657	6.82e-139	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
AMFGONCA_01658	1.29e-190	-	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
AMFGONCA_01659	2.72e-168	phnB	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
AMFGONCA_01660	6.34e-180	phnC	3.6.3.28	-	P	ko:K02041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
AMFGONCA_01661	1.78e-212	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphonate ABC transporter
AMFGONCA_01663	4.76e-111	usp5	-	-	T	-	-	-	universal stress protein
AMFGONCA_01664	1.24e-191	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
AMFGONCA_01665	6.51e-114	-	2.7.1.200, 2.7.1.204	-	G	ko:K02773,ko:K20112	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AMFGONCA_01666	1.14e-115	ntd	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside
AMFGONCA_01668	2.32e-127	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
AMFGONCA_01669	3.52e-311	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
AMFGONCA_01670	1.14e-192	-	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
AMFGONCA_01671	1.31e-128	-	-	-	I	-	-	-	PAP2 superfamily
AMFGONCA_01672	5e-227	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
AMFGONCA_01674	1.77e-220	-	-	-	S	-	-	-	Conserved hypothetical protein 698
AMFGONCA_01675	1.03e-34	-	-	-	S	-	-	-	Pyridoxamine 5'-phosphate oxidase
AMFGONCA_01676	6.34e-40	-	-	-	S	-	-	-	Pyridoxamine 5'-phosphate oxidase
AMFGONCA_01677	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	E1-E2 ATPase
AMFGONCA_01678	4.22e-41	-	-	-	C	-	-	-	Heavy-metal-associated domain
AMFGONCA_01679	1.45e-102	dpsB	-	-	P	-	-	-	Belongs to the Dps family
AMFGONCA_01680	2.6e-110	fnr	-	-	K	ko:K21562	-	ko00000,ko03000	Transcriptional regulator, Crp Fnr family
AMFGONCA_01681	1.85e-164	yobV3	-	-	K	-	-	-	WYL domain
AMFGONCA_01682	5.61e-72	-	-	-	S	-	-	-	pyridoxamine 5-phosphate
AMFGONCA_01683	5.68e-110	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
AMFGONCA_01684	3.68e-93	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Glycerol-3-phosphate cytidylyltransferase
AMFGONCA_01685	1.87e-159	gntR1	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
AMFGONCA_01686	1.53e-232	-	-	-	-	-	-	-	-
AMFGONCA_01687	0.0	oppA2	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
AMFGONCA_01690	7.62e-306	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	NADH oxidase
AMFGONCA_01691	1.48e-14	-	-	-	-	-	-	-	-
AMFGONCA_01692	5.24e-31	-	-	-	S	-	-	-	transposase or invertase
AMFGONCA_01693	9.6e-309	slpX	-	-	S	-	-	-	SLAP domain
AMFGONCA_01694	1.43e-186	-	-	-	K	-	-	-	SIS domain
AMFGONCA_01695	3.01e-154	rpiA1	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
AMFGONCA_01696	1.03e-237	XK27_10475	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
AMFGONCA_01697	1.93e-266	araT	2.6.1.57	-	E	ko:K00832,ko:K00841	ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
AMFGONCA_01698	1.89e-285	pts13C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AMFGONCA_01699	1.68e-161	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
AMFGONCA_01700	0.0	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
AMFGONCA_01701	1.96e-49	-	-	-	-	-	-	-	-
AMFGONCA_01702	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
AMFGONCA_01703	1.34e-183	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
AMFGONCA_01704	2.5e-172	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
AMFGONCA_01705	1.97e-227	pbpX2	-	-	V	-	-	-	Beta-lactamase
AMFGONCA_01706	6.8e-316	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
AMFGONCA_01707	4.98e-48	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
AMFGONCA_01708	2.95e-304	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
AMFGONCA_01709	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
AMFGONCA_01710	1.3e-26	-	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
AMFGONCA_01711	1.42e-58	-	-	-	-	-	-	-	-
AMFGONCA_01712	5.11e-265	-	-	-	S	-	-	-	Membrane
AMFGONCA_01713	3.41e-107	ykuL	-	-	S	-	-	-	(CBS) domain
AMFGONCA_01714	0.0	cadA	-	-	P	-	-	-	P-type ATPase
AMFGONCA_01715	5.71e-263	napA	-	-	P	-	-	-	Sodium/hydrogen exchanger family
AMFGONCA_01716	2.49e-63	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
AMFGONCA_01717	1.68e-55	yoeB	-	-	S	ko:K19158	-	ko00000,ko01000,ko02048	YoeB-like toxin of bacterial type II toxin-antitoxin system
AMFGONCA_01718	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
AMFGONCA_01719	1.91e-200	mutR	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
AMFGONCA_01720	1.05e-67	-	-	-	-	-	-	-	-
AMFGONCA_01721	3.62e-202	-	-	-	EGP	-	-	-	Major facilitator Superfamily
AMFGONCA_01722	3.49e-140	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Transcriptional regulator
AMFGONCA_01723	1.2e-155	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
AMFGONCA_01724	5.26e-244	-	-	-	S	-	-	-	DUF218 domain
AMFGONCA_01725	0.0	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
AMFGONCA_01726	0.0	ppc	4.1.1.31	-	H	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
AMFGONCA_01727	2.8e-128	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
AMFGONCA_01728	9.76e-256	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
AMFGONCA_01729	4.57e-232	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
AMFGONCA_01730	0.0	mglA	3.6.3.17	-	S	ko:K02056,ko:K06400	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
AMFGONCA_01731	2.07e-260	mglC	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
AMFGONCA_01732	3.63e-221	yufQ	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
AMFGONCA_01733	9.99e-89	-	-	-	S	-	-	-	Aldo/keto reductase family
AMFGONCA_01734	4.04e-99	-	-	-	S	-	-	-	Aldo/keto reductase family
AMFGONCA_01735	1.15e-173	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
AMFGONCA_01736	9.85e-154	dak	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
AMFGONCA_01737	1.06e-159	dgk2	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
AMFGONCA_01738	6.64e-94	-	-	-	-	-	-	-	-
AMFGONCA_01739	4.24e-178	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
AMFGONCA_01740	6.82e-292	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
AMFGONCA_01741	1.91e-97	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
AMFGONCA_01742	4.03e-75	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
AMFGONCA_01743	2.53e-117	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
AMFGONCA_01744	9.44e-183	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
AMFGONCA_01745	1.91e-102	-	-	-	G	-	-	-	Phosphoglycerate mutase family
AMFGONCA_01746	1.49e-13	-	-	-	G	-	-	-	Phosphoglycerate mutase family
AMFGONCA_01747	0.0	pps	2.7.9.2	-	H	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
AMFGONCA_01748	2.09e-208	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
AMFGONCA_01749	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
AMFGONCA_01750	8.43e-73	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
AMFGONCA_01751	6.56e-293	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
AMFGONCA_01752	0.0	yhaN	-	-	L	-	-	-	AAA domain
AMFGONCA_01753	4.53e-239	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
AMFGONCA_01755	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
AMFGONCA_01756	2.03e-310	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
AMFGONCA_01757	1.8e-99	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
AMFGONCA_01758	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AMFGONCA_01759	6.77e-49	-	-	-	-	-	-	-	-
AMFGONCA_01760	1.38e-223	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
AMFGONCA_01761	1.85e-115	ybaK	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AMFGONCA_01762	7.7e-21	-	-	-	-	-	-	-	-
AMFGONCA_01763	1.13e-45	-	-	-	-	-	-	-	-
AMFGONCA_01765	0.0	-	-	-	S	-	-	-	Putative threonine/serine exporter
AMFGONCA_01766	8.44e-174	-	-	-	EGP	-	-	-	Major Facilitator
AMFGONCA_01767	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
AMFGONCA_01768	5.3e-137	vanZ	-	-	V	-	-	-	VanZ like family
AMFGONCA_01769	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
AMFGONCA_01770	0.0	yclK	-	-	T	-	-	-	Histidine kinase
AMFGONCA_01771	4.96e-167	-	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
AMFGONCA_01772	9.01e-90	-	-	-	S	-	-	-	SdpI/YhfL protein family
AMFGONCA_01773	1.93e-242	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
AMFGONCA_01774	1.72e-288	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
AMFGONCA_01775	1.72e-127	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
AMFGONCA_01777	1e-22	-	-	-	S	-	-	-	Domain of Unknown Function with PDB structure (DUF3850)
AMFGONCA_01778	2.15e-194	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
AMFGONCA_01779	9.93e-72	crcB1	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AMFGONCA_01780	2.95e-84	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AMFGONCA_01781	1.31e-16	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
AMFGONCA_01782	3.03e-145	ybgF	-	-	E	ko:K02205,ko:K03293,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
AMFGONCA_01783	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
AMFGONCA_01784	9.58e-122	-	-	-	C	-	-	-	Pyridoxamine 5'-phosphate oxidase
AMFGONCA_01785	0.0	-	-	-	E	-	-	-	Amino acid permease
AMFGONCA_01786	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
AMFGONCA_01787	1.43e-310	ynbB	-	-	P	-	-	-	aluminum resistance
AMFGONCA_01788	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
AMFGONCA_01789	1.58e-101	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
AMFGONCA_01790	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
AMFGONCA_01791	1.3e-40	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
AMFGONCA_01792	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
AMFGONCA_01793	5.35e-224	mprF	-	-	S	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
AMFGONCA_01794	3.68e-256	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
AMFGONCA_01795	1.72e-286	-	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyl transferase 4-like domain
AMFGONCA_01823	1.64e-65	-	-	-	-	-	-	-	-
AMFGONCA_01824	7.58e-291	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
AMFGONCA_01825	6.85e-255	flp	-	-	V	-	-	-	Beta-lactamase
AMFGONCA_01826	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AMFGONCA_01827	1.42e-122	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
AMFGONCA_01832	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
AMFGONCA_01833	1.46e-117	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
AMFGONCA_01834	0.0	-	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
AMFGONCA_01835	6.97e-289	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
AMFGONCA_01836	3.43e-192	yhaH	-	-	S	-	-	-	Protein of unknown function (DUF805)
AMFGONCA_01837	2.89e-173	glnQ	-	-	E	ko:K17076	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
AMFGONCA_01838	0.0	XK27_05795	-	-	P	ko:K17073,ko:K17074	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
AMFGONCA_01839	1.41e-155	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
AMFGONCA_01840	1.54e-84	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
AMFGONCA_01841	9.4e-164	terC	-	-	P	-	-	-	Integral membrane protein TerC family
AMFGONCA_01842	1.77e-119	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	6-O-methylguanine DNA methyltransferase, DNA binding domain
AMFGONCA_01843	2.81e-166	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
AMFGONCA_01844	5.61e-113	-	-	-	-	-	-	-	-
AMFGONCA_01845	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AMFGONCA_01846	3.55e-232	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
AMFGONCA_01847	2.51e-190	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AMFGONCA_01848	3.21e-187	-	-	-	S	-	-	-	Protein of unknown function (DUF1002)
AMFGONCA_01849	3.66e-46	rbtT	-	-	P	ko:K13021	-	ko00000,ko02000	Major Facilitator Superfamily
AMFGONCA_01850	1.29e-27	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
AMFGONCA_01851	3.22e-185	-	-	-	K	-	-	-	rpiR family
AMFGONCA_01852	5.06e-237	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
AMFGONCA_01853	7.56e-225	ybbE	3.4.16.4	-	V	ko:K21469	ko00550,map00550	ko00000,ko00001,ko01000,ko01002,ko01011	Beta-lactamase
AMFGONCA_01854	1.54e-194	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
AMFGONCA_01855	0.0	pts32BC	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
AMFGONCA_01856	5.03e-313	mdr	-	-	EGP	-	-	-	Major Facilitator
AMFGONCA_01857	1.72e-285	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
AMFGONCA_01860	1.16e-192	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
AMFGONCA_01861	0.0	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
AMFGONCA_01862	2.12e-132	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
AMFGONCA_01863	1.05e-233	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
AMFGONCA_01864	6.91e-118	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
AMFGONCA_01865	1.93e-143	-	-	-	G	-	-	-	phosphoglycerate mutase
AMFGONCA_01866	2.31e-179	-	-	-	S	ko:K06889	-	ko00000	Alpha/beta hydrolase family
AMFGONCA_01867	1.45e-183	XK27_08125	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
AMFGONCA_01868	1.58e-154	-	-	-	-	-	-	-	-
AMFGONCA_01869	9.18e-202	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
AMFGONCA_01870	7.9e-255	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
AMFGONCA_01871	2.61e-23	-	-	-	-	-	-	-	-
AMFGONCA_01872	1.48e-119	-	-	-	S	-	-	-	membrane
AMFGONCA_01873	6.45e-93	-	-	-	K	-	-	-	LytTr DNA-binding domain
AMFGONCA_01875	4.48e-129	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
AMFGONCA_01876	1.25e-94	-	-	-	K	-	-	-	Helix-turn-helix domain
AMFGONCA_01878	6.66e-27	-	-	-	S	-	-	-	CAAX protease self-immunity
AMFGONCA_01879	2.67e-35	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
AMFGONCA_01881	4.11e-124	potE	-	-	E	-	-	-	thought to be involved in transport amino acids across the membrane
AMFGONCA_01883	2.23e-189	-	-	-	S	-	-	-	Putative ABC-transporter type IV
AMFGONCA_01885	4.13e-38	-	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
AMFGONCA_01886	3.66e-43	-	-	-	-	-	-	-	-
AMFGONCA_01887	7.51e-145	-	-	-	K	-	-	-	WHG domain
AMFGONCA_01888	3.41e-125	azo1	1.5.1.36, 1.7.1.6	-	S	ko:K03206,ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
AMFGONCA_01889	2.58e-126	azr	1.5.1.36	-	S	ko:K22394	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
AMFGONCA_01890	9.48e-194	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
AMFGONCA_01891	5.24e-230	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
AMFGONCA_01893	2.99e-75	cvpA	-	-	S	-	-	-	Colicin V production protein
AMFGONCA_01894	3.66e-166	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
AMFGONCA_01895	6.84e-190	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
AMFGONCA_01896	4.99e-178	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
AMFGONCA_01897	4.28e-197	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
AMFGONCA_01898	4.49e-59	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
AMFGONCA_01899	6.88e-257	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
AMFGONCA_01900	3.93e-176	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
AMFGONCA_01901	1.22e-190	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter, ATP-binding protein
AMFGONCA_01902	2.76e-178	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter, ATP-binding protein
AMFGONCA_01903	0.0	ndvA	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
AMFGONCA_01904	8.32e-157	vanR	-	-	K	-	-	-	response regulator
AMFGONCA_01905	9.28e-271	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
AMFGONCA_01906	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AMFGONCA_01907	7.79e-186	racD	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
AMFGONCA_01908	6.94e-70	-	-	-	S	-	-	-	Enterocin A Immunity
AMFGONCA_01909	1.95e-45	-	-	-	-	-	-	-	-
AMFGONCA_01910	1.07e-35	-	-	-	-	-	-	-	-
AMFGONCA_01911	4.48e-34	-	-	-	-	-	-	-	-
AMFGONCA_01912	0.0	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
AMFGONCA_01913	0.0	agl	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
AMFGONCA_01914	0.0	-	-	-	S	ko:K06921	-	ko00000	Archaea bacterial proteins of unknown function
AMFGONCA_01915	1.89e-23	-	-	-	-	-	-	-	-
AMFGONCA_01916	7.34e-178	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
AMFGONCA_01917	2.08e-164	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
AMFGONCA_01918	0.0	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
AMFGONCA_01919	7.86e-138	mesE	-	-	M	ko:K12293,ko:K20345	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko02000	Transport protein ComB
AMFGONCA_01920	5.02e-180	blpT	-	-	-	-	-	-	-
AMFGONCA_01924	7.87e-30	-	-	-	-	-	-	-	-
AMFGONCA_01925	4.74e-107	-	-	-	-	-	-	-	-
AMFGONCA_01926	6.32e-42	-	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
AMFGONCA_01927	2.52e-32	-	-	-	-	-	-	-	-
AMFGONCA_01928	3.41e-88	-	-	-	-	-	-	-	-
AMFGONCA_01929	3.09e-212	natA	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
AMFGONCA_01930	6.39e-279	natB	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
AMFGONCA_01931	3.14e-175	fruR	-	-	K	ko:K03436	-	ko00000,ko03000	DeoR C terminal sensor domain
AMFGONCA_01932	2.18e-215	pfkB	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family. LacC subfamily
AMFGONCA_01933	0.0	fruA	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase System
AMFGONCA_01934	4.47e-56	-	-	-	K	ko:K21903	-	ko00000,ko03000	helix_turn_helix, Arsenical Resistance Operon Repressor
AMFGONCA_01935	2.96e-210	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
AMFGONCA_01936	1.63e-152	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
AMFGONCA_01937	1.59e-172	znuB	-	-	U	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
AMFGONCA_01939	4.2e-192	-	-	-	S	-	-	-	COG0433 Predicted ATPase
AMFGONCA_01943	1.64e-98	-	-	-	U	ko:K03205	ko03070,map03070	ko00000,ko00001,ko00002,ko02044	TraM recognition site of TraD and TraG
AMFGONCA_01944	4.47e-26	-	-	-	-	-	-	-	-
AMFGONCA_01946	1.59e-59	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
AMFGONCA_01949	1.05e-40	-	-	-	-	-	-	-	-
AMFGONCA_01950	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AMFGONCA_01951	2.24e-198	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
AMFGONCA_01952	2.16e-136	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
AMFGONCA_01953	3.04e-105	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
AMFGONCA_01954	0.0	dnaB2	-	-	L	ko:K03346	-	ko00000,ko03032	Replication initiation and membrane attachment
AMFGONCA_01955	1.31e-215	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
AMFGONCA_01956	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AMFGONCA_01957	2.28e-97	-	-	-	-	-	-	-	-
AMFGONCA_01958	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
AMFGONCA_01959	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
AMFGONCA_01960	1.77e-157	ypgQ	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
AMFGONCA_01961	0.0	pepC2	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
AMFGONCA_01963	9.39e-71	-	-	-	-	-	-	-	-
AMFGONCA_01964	7.03e-307	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AMFGONCA_01965	0.0	-	-	-	S	-	-	-	Fibronectin type III domain
AMFGONCA_01966	1.65e-72	-	-	-	-	-	-	-	-
AMFGONCA_01967	3.31e-154	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
AMFGONCA_01968	8.06e-110	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
AMFGONCA_01969	2.29e-162	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
AMFGONCA_01970	3.69e-54	-	-	-	L	ko:K07473	-	ko00000,ko02048	Addiction module antitoxin, RelB DinJ family
AMFGONCA_01971	5.05e-11	-	-	-	-	-	-	-	-
AMFGONCA_01972	3.58e-61	-	-	-	S	ko:K07124	-	ko00000	Enoyl-(Acyl carrier protein) reductase
AMFGONCA_01973	2.18e-122	yneE	-	-	K	-	-	-	Transcriptional regulator
AMFGONCA_01974	3.87e-80	yneE	-	-	K	-	-	-	Transcriptional regulator
AMFGONCA_01975	9.01e-287	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
AMFGONCA_01976	8.73e-187	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
AMFGONCA_01977	1.28e-292	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
AMFGONCA_01978	2.52e-52	-	-	-	-	-	-	-	-
AMFGONCA_01979	5.7e-209	-	-	-	EG	-	-	-	EamA-like transporter family
AMFGONCA_01980	6.7e-211	-	-	-	EG	-	-	-	EamA-like transporter family
AMFGONCA_01981	1.28e-106	yicL	-	-	EG	-	-	-	EamA-like transporter family
AMFGONCA_01982	7.81e-107	-	-	-	-	-	-	-	-
AMFGONCA_01983	1.06e-141	-	-	-	-	-	-	-	-
AMFGONCA_01984	2.9e-19	-	-	-	S	-	-	-	DUF218 domain
AMFGONCA_01985	2.39e-182	-	-	-	S	-	-	-	DUF218 domain
AMFGONCA_01986	0.0	yheS_2	-	-	S	ko:K18231,ko:K19349	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ATPases associated with a variety of cellular activities
AMFGONCA_01987	8.23e-112	-	-	-	-	-	-	-	-
AMFGONCA_01988	1.09e-74	-	-	-	-	-	-	-	-
AMFGONCA_01989	7.26e-35	-	-	-	S	-	-	-	Protein conserved in bacteria
AMFGONCA_01990	2.27e-71	-	-	-	S	-	-	-	protein encoded in hypervariable junctions of pilus gene clusters
AMFGONCA_01991	2.92e-79	-	-	-	-	-	-	-	-
AMFGONCA_01992	0.0	celD	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AMFGONCA_01993	4.04e-94	-	-	-	S	-	-	-	Domain of unknown function (DUF3284)
AMFGONCA_01994	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
AMFGONCA_01995	9.5e-153	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA
AMFGONCA_01996	1.8e-284	pts23C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AMFGONCA_01997	0.0	pbg6	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
AMFGONCA_01998	1.22e-174	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
AMFGONCA_01999	9.43e-47	yfhC	-	-	C	-	-	-	nitroreductase
AMFGONCA_02000	3.47e-49	yfhC	-	-	C	-	-	-	nitroreductase
AMFGONCA_02001	8.72e-111	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
AMFGONCA_02002	4.26e-165	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
AMFGONCA_02003	8.75e-200	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AMFGONCA_02004	1.4e-80	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
AMFGONCA_02005	1.14e-196	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
AMFGONCA_02006	7.55e-69	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
AMFGONCA_02007	1.29e-143	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AMFGONCA_02008	1.18e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2508)
AMFGONCA_02009	3.08e-140	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
AMFGONCA_02010	1.55e-68	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
AMFGONCA_02011	1.15e-47	-	-	-	M	-	-	-	lipopolysaccharide 3-alpha-galactosyltransferase activity
AMFGONCA_02012	1.12e-136	-	-	-	M	-	-	-	family 8
AMFGONCA_02013	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AMFGONCA_02014	3.03e-110	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
AMFGONCA_02015	1.81e-151	-	-	-	-	-	-	-	-
AMFGONCA_02016	5.04e-154	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
AMFGONCA_02017	1.13e-126	-	-	-	-	-	-	-	-
AMFGONCA_02018	6.93e-140	-	-	-	K	-	-	-	LysR substrate binding domain
AMFGONCA_02019	4.04e-29	-	-	-	-	-	-	-	-
AMFGONCA_02020	2.53e-286	-	-	-	S	-	-	-	Sterol carrier protein domain
AMFGONCA_02021	1.76e-122	citX	2.7.7.61	-	HI	ko:K05964	ko02020,map02020	ko00000,ko00001,ko01000	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
AMFGONCA_02022	2.01e-135	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
AMFGONCA_02023	5.39e-84	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AMFGONCA_02024	2.06e-298	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
AMFGONCA_02025	6.12e-177	lysR5	-	-	K	-	-	-	LysR substrate binding domain
AMFGONCA_02026	3.05e-235	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
AMFGONCA_02027	4.86e-150	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
AMFGONCA_02028	2.15e-137	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
AMFGONCA_02029	1.1e-184	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
AMFGONCA_02030	6.48e-136	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
AMFGONCA_02031	0.0	sasH	3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45	-	F	ko:K01081,ko:K01119,ko:K07004,ko:K08693,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
AMFGONCA_02032	9.89e-74	-	-	-	-	-	-	-	-
AMFGONCA_02033	0.0	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
AMFGONCA_02034	1.23e-231	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
AMFGONCA_02035	1.6e-272	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
AMFGONCA_02036	4.51e-69	-	-	-	-	-	-	-	-
AMFGONCA_02037	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
AMFGONCA_02038	6.12e-66	-	-	-	-	-	-	-	-
AMFGONCA_02039	2.32e-234	-	-	-	S	-	-	-	AAA domain
AMFGONCA_02040	9.82e-164	gpmA1	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AMFGONCA_02041	2.42e-33	-	-	-	-	-	-	-	-
AMFGONCA_02042	8.43e-206	-	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
AMFGONCA_02043	3.16e-160	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
AMFGONCA_02044	2.02e-169	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
AMFGONCA_02045	1.1e-152	-	3.8.1.2	-	S	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
AMFGONCA_02046	4.57e-135	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
AMFGONCA_02047	6.11e-66	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
AMFGONCA_02048	4.4e-86	-	-	-	K	-	-	-	LytTr DNA-binding domain
AMFGONCA_02049	0.0	-	-	-	E	-	-	-	Amino acid permease
AMFGONCA_02051	1.14e-99	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AMFGONCA_02052	1.96e-110	-	2.7.7.65	-	T	ko:K02488	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko00002,ko01000,ko02022	GGDEF domain
AMFGONCA_02053	2.64e-46	-	-	-	-	-	-	-	-
AMFGONCA_02054	3.43e-49	icaA	-	-	M	-	-	-	Glycosyl transferase family group 2
AMFGONCA_02055	9.63e-81	icaA	-	-	M	-	-	-	Glycosyl transferase family group 2
AMFGONCA_02056	2.21e-34	-	4.1.2.50, 4.2.3.12	-	H	ko:K01737	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000,ko03016	6-pyruvoyl tetrahydropterin synthase
AMFGONCA_02057	6.91e-118	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
AMFGONCA_02058	5.12e-199	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
AMFGONCA_02059	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
AMFGONCA_02060	0.0	pts33BCA	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
AMFGONCA_02061	2.4e-194	bglG5	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
AMFGONCA_02062	1.25e-262	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
AMFGONCA_02063	3.07e-112	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AMFGONCA_02064	2.85e-153	-	-	-	-	-	-	-	-
AMFGONCA_02065	6.52e-98	copY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Penicillinase repressor
AMFGONCA_02066	8.04e-190	-	-	-	S	-	-	-	hydrolase
AMFGONCA_02067	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AMFGONCA_02068	2.76e-221	ybbR	-	-	S	-	-	-	YbbR-like protein
AMFGONCA_02069	2.13e-194	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
AMFGONCA_02070	3.46e-266	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
AMFGONCA_02071	3.69e-170	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
AMFGONCA_02072	8.77e-173	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
AMFGONCA_02073	1.25e-263	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
AMFGONCA_02074	2.84e-208	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
AMFGONCA_02075	1.51e-127	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
AMFGONCA_02076	4.82e-113	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
AMFGONCA_02077	1.1e-232	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
AMFGONCA_02078	1.64e-174	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
AMFGONCA_02079	2.81e-200	ycsE	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
AMFGONCA_02080	2.53e-123	-	-	-	-	-	-	-	-
AMFGONCA_02081	1.18e-253	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
AMFGONCA_02082	5.46e-183	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
AMFGONCA_02083	2.86e-286	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
AMFGONCA_02084	2.86e-244	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
AMFGONCA_02085	9.53e-241	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	Putative sugar-binding domain
AMFGONCA_02087	0.0	-	-	-	-	-	-	-	-
AMFGONCA_02088	0.0	ycaM	-	-	E	-	-	-	amino acid
AMFGONCA_02089	1.43e-178	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
AMFGONCA_02090	7.65e-101	-	-	-	K	-	-	-	MerR HTH family regulatory protein
AMFGONCA_02091	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
AMFGONCA_02092	4.64e-63	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
AMFGONCA_02093	4.89e-14	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
AMFGONCA_02094	2.65e-154	nanA	4.1.3.3	-	EM	ko:K01639	ko00520,map00520	ko00000,ko00001,ko01000	Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
AMFGONCA_02095	1.03e-112	nanK	-	-	GK	-	-	-	ROK family
AMFGONCA_02096	3.74e-70	-	-	-	G	-	-	-	Xylose isomerase domain protein TIM barrel
AMFGONCA_02097	1.48e-166	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
AMFGONCA_02098	6.48e-279	-	-	-	E	ko:K03307	-	ko00000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AMFGONCA_02099	1.4e-74	cah	3.1.1.41	-	Q	ko:K01060	ko00311,ko01130,map00311,map01130	ko00000,ko00001,ko01000	Acetyl xylan esterase (AXE1)
AMFGONCA_02100	4.42e-45	cah	3.1.1.41	-	Q	ko:K01060	ko00311,ko01130,map00311,map01130	ko00000,ko00001,ko01000	Acetyl xylan esterase (AXE1)
AMFGONCA_02101	6.9e-141	nanE	5.1.3.9	-	G	ko:K01788	ko00520,map00520	ko00000,ko00001,ko01000	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
AMFGONCA_02102	2.58e-13	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AMFGONCA_02103	1.59e-108	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AMFGONCA_02104	1.13e-201	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter transmembrane region
AMFGONCA_02105	2.91e-83	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter transmembrane region
AMFGONCA_02106	8.64e-85	yybA	-	-	K	-	-	-	Transcriptional regulator
AMFGONCA_02107	8e-108	XK27_03150	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
AMFGONCA_02108	5.59e-109	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
AMFGONCA_02109	5.81e-98	ykoJ	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
AMFGONCA_02110	2.37e-242	-	-	-	T	-	-	-	GHKL domain
AMFGONCA_02111	1.75e-168	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
AMFGONCA_02112	1.28e-228	pepR	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
AMFGONCA_02113	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
AMFGONCA_02114	1.83e-171	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
AMFGONCA_02115	4.59e-124	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
AMFGONCA_02116	1.42e-247	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
AMFGONCA_02117	2.44e-64	bbsF_1	2.8.3.19	-	C	ko:K18702	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
AMFGONCA_02118	8.98e-214	frc	2.8.3.16	-	C	ko:K07749	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
AMFGONCA_02119	0.0	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
AMFGONCA_02120	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
AMFGONCA_02121	8.74e-146	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
AMFGONCA_02122	1.33e-130	-	-	-	M	-	-	-	LysM domain protein
AMFGONCA_02123	5.68e-211	-	-	-	D	-	-	-	nuclear chromosome segregation
AMFGONCA_02124	8.92e-136	-	-	-	G	-	-	-	Phosphoglycerate mutase family
AMFGONCA_02125	9.01e-115	-	-	-	G	-	-	-	Histidine phosphatase superfamily (branch 1)
AMFGONCA_02126	1.9e-153	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
AMFGONCA_02127	2.67e-148	glpQ1	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
AMFGONCA_02129	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
AMFGONCA_02131	9.67e-33	-	-	-	S	-	-	-	Domain of unknown function DUF1829
AMFGONCA_02132	0.0	-	-	-	-	-	-	-	-
AMFGONCA_02133	5.74e-96	eda	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	KDPG and KHG aldolase
AMFGONCA_02134	1.09e-196	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
AMFGONCA_02135	1.2e-41	-	-	-	-	-	-	-	-
AMFGONCA_02136	1.61e-101	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
AMFGONCA_02137	1.05e-173	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
AMFGONCA_02138	5.7e-282	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
AMFGONCA_02139	2.16e-163	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
AMFGONCA_02140	1.48e-210	lacR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
AMFGONCA_02141	0.0	lacL	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
AMFGONCA_02142	4.61e-180	lacM	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
AMFGONCA_02143	2.84e-240	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
AMFGONCA_02144	4.05e-209	-	-	-	S	-	-	-	Nucleotidyl transferase AbiEii toxin, Type IV TA system
AMFGONCA_02145	5.55e-137	-	-	-	K	-	-	-	Transcriptional regulator, AbiEi antitoxin
AMFGONCA_02146	4.05e-242	-	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding protein-like domain
AMFGONCA_02147	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
AMFGONCA_02148	1.62e-277	yqjV	-	-	EGP	-	-	-	Major Facilitator Superfamily
AMFGONCA_02149	2.19e-292	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
AMFGONCA_02150	1.69e-132	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
AMFGONCA_02151	1.35e-180	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AMFGONCA_02152	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Ribonucleoside-triphosphate reductase
AMFGONCA_02154	1.28e-311	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
AMFGONCA_02155	5.51e-46	-	-	-	S	-	-	-	Transposase C of IS166 homeodomain
AMFGONCA_02156	4.01e-84	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
AMFGONCA_02157	9.48e-31	-	-	-	-	-	-	-	-
AMFGONCA_02158	1.62e-77	-	-	-	M	-	-	-	Rib/alpha-like repeat
AMFGONCA_02159	3.86e-145	-	-	-	M	-	-	-	Rib/alpha-like repeat
AMFGONCA_02160	1.08e-265	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
AMFGONCA_02161	1.34e-191	oppB	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AMFGONCA_02162	6.71e-241	oppC	-	-	EP	ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AMFGONCA_02163	6.08e-253	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
AMFGONCA_02164	6.54e-222	oppF	-	-	P	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
AMFGONCA_02165	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
AMFGONCA_02166	8.35e-94	hsp	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
AMFGONCA_02167	2.02e-38	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
AMFGONCA_02168	8.49e-146	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
AMFGONCA_02169	1.13e-41	-	-	-	M	-	-	-	Lysin motif
AMFGONCA_02170	5.6e-148	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
AMFGONCA_02171	1.4e-281	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
AMFGONCA_02172	1.34e-314	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
AMFGONCA_02173	4.76e-56	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
AMFGONCA_02174	7.11e-293	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
AMFGONCA_02175	2e-299	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AMFGONCA_02176	1.01e-255	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
AMFGONCA_02177	1.99e-87	srlB	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
AMFGONCA_02178	2.19e-270	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
AMFGONCA_02179	2.48e-135	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
AMFGONCA_02180	3.12e-91	-	-	-	S	-	-	-	Protein of unknown function (DUF1149)
AMFGONCA_02181	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
AMFGONCA_02182	1.47e-284	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
AMFGONCA_02183	5.49e-301	ymfH	-	-	S	-	-	-	Peptidase M16
AMFGONCA_02184	1.39e-171	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
AMFGONCA_02185	2.13e-152	ymfM	-	-	S	ko:K15539	-	ko00000	Helix-turn-helix domain
AMFGONCA_02186	3.92e-123	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AMFGONCA_02187	1.17e-248	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
AMFGONCA_02188	3.03e-293	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
AMFGONCA_02189	1.94e-268	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	transferase
AMFGONCA_02190	5.04e-154	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
AMFGONCA_02191	2.68e-314	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
AMFGONCA_02192	9.44e-169	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
AMFGONCA_02193	1.55e-122	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AMFGONCA_02194	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
AMFGONCA_02195	2.24e-238	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AMFGONCA_02196	8.33e-27	-	-	-	-	-	-	-	-
AMFGONCA_02197	3.54e-230	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
AMFGONCA_02198	4.04e-203	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
AMFGONCA_02199	3.31e-239	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
AMFGONCA_02200	3.42e-232	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
AMFGONCA_02201	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
AMFGONCA_02202	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
AMFGONCA_02203	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
AMFGONCA_02204	1.55e-117	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
AMFGONCA_02205	2.44e-211	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
AMFGONCA_02206	2.78e-251	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
AMFGONCA_02207	8.59e-221	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
AMFGONCA_02208	1.16e-128	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
AMFGONCA_02209	0.0	-	-	-	S	-	-	-	SH3-like domain
AMFGONCA_02210	3.16e-144	ybbL	-	-	S	ko:K02068	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
AMFGONCA_02211	4.76e-168	ybbM	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
AMFGONCA_02212	1.72e-22	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
AMFGONCA_02213	1.02e-34	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.87
AMFGONCA_02222	1.18e-95	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	domain protein
AMFGONCA_02224	5.89e-316	ade	3.5.4.2	-	F	ko:K01486	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	Adenine deaminase C-terminal domain
AMFGONCA_02225	1.73e-195	-	-	-	P	ko:K02055	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
AMFGONCA_02226	2.95e-107	potA11	3.6.3.30	-	P	ko:K02010,ko:K02052	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
AMFGONCA_02227	9.95e-37	potA11	3.6.3.30	-	P	ko:K02010,ko:K02052	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
AMFGONCA_02228	1.95e-107	potC3	-	-	E	ko:K02053	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
AMFGONCA_02229	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
AMFGONCA_02230	3.56e-281	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
AMFGONCA_02231	0.0	lacZ	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	-beta-galactosidase
AMFGONCA_02232	7.28e-299	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
AMFGONCA_02233	2.17e-81	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
AMFGONCA_02234	1.44e-62	-	-	-	S	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
AMFGONCA_02235	1.64e-169	adh2	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
AMFGONCA_02236	1.17e-87	-	-	-	GM	-	-	-	NAD(P)H-binding
AMFGONCA_02237	1.59e-44	-	-	-	S	-	-	-	Domain of unknown function (DUF4440)
AMFGONCA_02238	3.49e-113	-	-	-	K	-	-	-	LysR substrate binding domain
AMFGONCA_02240	2.25e-57	-	-	-	K	-	-	-	Tetracycline repressor, C-terminal all-alpha domain
AMFGONCA_02241	5.94e-100	-	-	-	S	ko:K06889	-	ko00000	X-Pro dipeptidyl-peptidase (S15 family)
AMFGONCA_02243	3.09e-71	-	-	-	-	-	-	-	-
AMFGONCA_02244	2.96e-23	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
AMFGONCA_02245	7.4e-188	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
AMFGONCA_02246	3.18e-126	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
AMFGONCA_02247	8.32e-171	-	-	-	-	-	-	-	-
AMFGONCA_02248	4.06e-132	-	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
AMFGONCA_02251	5.88e-311	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
AMFGONCA_02252	8.01e-85	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
AMFGONCA_02253	2.94e-203	-	-	-	K	-	-	-	Transcriptional regulator
AMFGONCA_02254	1.31e-81	-	-	-	S	-	-	-	Domain of unknown function (DUF956)
AMFGONCA_02255	3.51e-222	manN	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	system, mannose fructose sorbose family IID component
AMFGONCA_02256	9.65e-181	manY	-	-	G	ko:K02746,ko:K02795	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system
AMFGONCA_02257	2.72e-236	manL	2.7.1.191	-	G	ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
AMFGONCA_02259	4.6e-63	-	-	-	-	-	-	-	-
AMFGONCA_02260	2.37e-43	-	-	-	-	-	-	-	-
AMFGONCA_02261	3.71e-154	-	-	-	S	-	-	-	Baseplate J-like protein
AMFGONCA_02263	8.2e-07	-	-	-	-	-	-	-	-
AMFGONCA_02270	2.71e-297	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
AMFGONCA_02271	4.63e-192	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AMFGONCA_02272	5.86e-131	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
AMFGONCA_02273	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
AMFGONCA_02274	7.33e-218	fba	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-1,6-bisphosphate aldolase, class II
AMFGONCA_02275	2.72e-15	-	-	-	-	-	-	-	-
AMFGONCA_02276	4.56e-78	celC	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose Cellobiose specific IIA subunit
AMFGONCA_02277	1.32e-74	pts20B	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
AMFGONCA_02278	1.33e-165	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA domain
AMFGONCA_02279	0.0	pbg4	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
AMFGONCA_02280	2.49e-117	alkD	-	-	L	-	-	-	DNA alkylation repair enzyme
AMFGONCA_02281	7.39e-225	iunH	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	inosine-uridine preferring nucleoside hydrolase
AMFGONCA_02282	3.85e-109	-	-	-	-	-	-	-	-
AMFGONCA_02283	3.04e-53	-	-	-	C	-	-	-	FMN_bind
AMFGONCA_02284	1.71e-150	-	-	-	S	-	-	-	Peptidase family M23
AMFGONCA_02285	1.74e-136	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AMFGONCA_02286	7.99e-87	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
AMFGONCA_02291	1.1e-128	-	-	-	E	ko:K02054	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
AMFGONCA_02292	2.5e-122	rihC	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
AMFGONCA_02293	1.07e-93	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
AMFGONCA_02294	9.64e-38	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
AMFGONCA_02295	8.69e-76	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AMFGONCA_02296	1.52e-193	add	3.5.4.2, 3.5.4.4	-	F	ko:K01488,ko:K02029,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AMFGONCA_02297	5.81e-253	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
AMFGONCA_02298	6.85e-109	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
AMFGONCA_02299	5.03e-256	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
AMFGONCA_02300	1.77e-157	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
AMFGONCA_02301	9.22e-141	yqeK	-	-	H	-	-	-	Hydrolase, HD family
AMFGONCA_02302	5.09e-78	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
AMFGONCA_02303	8.01e-276	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
AMFGONCA_02304	2.19e-125	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
AMFGONCA_02305	3.52e-163	csrR	-	-	K	-	-	-	response regulator
AMFGONCA_02306	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
AMFGONCA_02307	2.19e-18	-	-	-	-	-	-	-	-
AMFGONCA_02308	4.28e-125	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
AMFGONCA_02309	2.95e-283	-	-	-	S	-	-	-	SLAP domain
AMFGONCA_02310	3.23e-108	-	-	-	S	ko:K19055	-	ko00000,ko01000,ko03016	Aminoacyl-tRNA editing domain
AMFGONCA_02311	2.43e-216	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
AMFGONCA_02312	1.32e-57	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
AMFGONCA_02313	1.37e-173	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AMFGONCA_02314	3.71e-76	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
AMFGONCA_02316	2.02e-97	glnP9	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter, permease protein
AMFGONCA_02317	1.68e-149	glnP7	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter permease
AMFGONCA_02318	4.57e-163	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
AMFGONCA_02319	3.72e-202	cjaA	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
AMFGONCA_02320	2.9e-254	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
AMFGONCA_02321	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
AMFGONCA_02322	2.55e-94	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
AMFGONCA_02323	6.74e-214	ldh3	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	lactate/malate dehydrogenase, alpha/beta C-terminal domain
AMFGONCA_02324	3.55e-182	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
AMFGONCA_02325	1.8e-34	-	-	-	-	-	-	-	-
AMFGONCA_02326	0.0	sufI	-	-	Q	-	-	-	Multicopper oxidase
AMFGONCA_02327	1.76e-193	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
AMFGONCA_02328	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
AMFGONCA_02329	1.43e-294	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
AMFGONCA_02330	2.89e-312	-	-	-	S	ko:K12941	-	ko00000,ko01002	Peptidase dimerisation domain
AMFGONCA_02331	1.3e-175	-	-	-	S	-	-	-	Protein of unknown function (DUF3100)
AMFGONCA_02332	2.04e-60	-	-	-	S	-	-	-	An automated process has identified a potential problem with this gene model
AMFGONCA_02333	4.34e-64	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
AMFGONCA_02334	1.51e-163	-	-	-	S	-	-	-	SLAP domain