ORF_ID e_value Gene_name EC_number CAZy COGs KEGG_ko KEGG_Pathway BRITE Description
GDDEPIKL_00001 1.64e-55 - - - L - - - Transposase, Mutator family
GDDEPIKL_00002 2.01e-136 - - - K - - - Bacterial regulatory proteins, tetR family
GDDEPIKL_00003 0.0 - - - S - - - Psort location Cytoplasmic, score 8.87
GDDEPIKL_00004 4.08e-117 ogt 2.1.1.63 - L ko:K00567,ko:K07443 - ko00000,ko01000,ko03400 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
GDDEPIKL_00005 5.21e-103 acpS 2.7.8.7 - I ko:K00997 ko00770,map00770 ko00000,ko00001,ko01000 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
GDDEPIKL_00006 4.26e-91 ams 2.4.1.4 GH13 G ko:K05341 ko00500,map00500 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain
GDDEPIKL_00009 1.71e-09 - - - - - - - -
GDDEPIKL_00010 1.49e-104 - - - - - - - -
GDDEPIKL_00011 0.0 - - - Q - - - von Willebrand factor (vWF) type A domain
GDDEPIKL_00012 0.0 - - - M - - - LPXTG cell wall anchor motif
GDDEPIKL_00014 2.46e-113 - - - - - - - -
GDDEPIKL_00015 5.54e-146 - - - - - - - -
GDDEPIKL_00016 2.04e-56 rpsO - - J ko:K02956 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
GDDEPIKL_00017 0.0 pnp 2.7.7.8 - J ko:K00962 ko00230,ko00240,ko03018,map00230,map00240,map03018 ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
GDDEPIKL_00018 1.41e-152 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
GDDEPIKL_00019 1.35e-87 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
GDDEPIKL_00020 2.57e-118 lemA - - S ko:K03744 - ko00000 LemA family
GDDEPIKL_00021 0.0 - - - S - - - Predicted membrane protein (DUF2207)
GDDEPIKL_00022 3.74e-13 - - - S - - - Predicted membrane protein (DUF2207)
GDDEPIKL_00023 4.74e-224 - - - S - - - Predicted membrane protein (DUF2207)
GDDEPIKL_00024 2.61e-80 - - - S - - - Predicted membrane protein (DUF2207)
GDDEPIKL_00025 1.42e-28 - - - - - - - -
GDDEPIKL_00026 8.24e-216 - - - C - - - Oxidoreductase, aldo keto reductase family protein
GDDEPIKL_00027 2.23e-259 - 3.2.2.1 - F ko:K01239 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 Inosine-uridine preferring nucleoside hydrolase
GDDEPIKL_00028 2.1e-137 rimM - - J ko:K02860 - ko00000,ko03009 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
GDDEPIKL_00029 3.56e-47 - - - S ko:K06960 - ko00000 Belongs to the UPF0109 family
GDDEPIKL_00030 5.48e-84 rpsP - - J ko:K02959 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bS16 family
GDDEPIKL_00031 1.33e-270 - - - S - - - Endonuclease/Exonuclease/phosphatase family
GDDEPIKL_00032 0.0 ffh 3.6.5.4 - U ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko01000,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
GDDEPIKL_00033 1.58e-207 - - - P - - - Cation efflux family
GDDEPIKL_00034 0.0 cysS 6.1.1.16 - J ko:K01883 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
GDDEPIKL_00035 1.69e-172 - 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Peptidase C26
GDDEPIKL_00036 0.0 yjjK - - S ko:K15738 - ko00000,ko02000 ABC transporter
GDDEPIKL_00037 9.42e-95 vapC - - S ko:K07062 - ko00000,ko01000,ko02048 Toxic component of a toxin-antitoxin (TA) module. An RNase
GDDEPIKL_00038 1.52e-57 - - - S ko:K21495 - ko00000,ko02048 Plasmid stability protein
GDDEPIKL_00039 1.66e-119 ilvN 2.2.1.6 - E ko:K01653 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 ACT domain
GDDEPIKL_00040 0.0 ilvB 2.2.1.6 - H ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Thiamine pyrophosphate enzyme, central domain
GDDEPIKL_00041 6.09e-173 rnc 3.1.26.3 - J ko:K03685 ko03008,ko05205,map03008,map05205 ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
GDDEPIKL_00042 4.87e-37 rpmF - - J ko:K02911 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bL32 family
GDDEPIKL_00043 1.59e-150 - - - S ko:K07040 - ko00000 Uncharacterized ACR, COG1399
GDDEPIKL_00044 3.24e-159 - - - - - - - -
GDDEPIKL_00045 9.97e-114 coaD 2.7.7.3 - H ko:K00954 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
GDDEPIKL_00046 2.31e-66 - - - S - - - Protein of unknown function (DUF3039)
GDDEPIKL_00047 7.62e-248 - - - C ko:K19265 - ko00000,ko01000 Aldo/keto reductase family
GDDEPIKL_00048 7.41e-102 - - - K - - - MerR, DNA binding
GDDEPIKL_00049 5.52e-152 - - - - - - - -
GDDEPIKL_00050 9.45e-317 pncB 6.3.4.21 - F ko:K00763 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GDDEPIKL_00051 3.84e-186 rph 2.7.7.56 - J ko:K00989 - ko00000,ko01000,ko03016 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
GDDEPIKL_00052 4.4e-171 rdgB 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
GDDEPIKL_00053 2.67e-226 - - - S ko:K07088 - ko00000 Auxin Efflux Carrier
GDDEPIKL_00056 0.0 pgi 5.3.1.9 - G ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GPI family
GDDEPIKL_00057 0.0 - - - P ko:K02049 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
GDDEPIKL_00058 0.0 - - - P ko:K02050 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_00060 1.37e-78 rplS - - J ko:K02884 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
GDDEPIKL_00061 3.25e-223 lepB 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
GDDEPIKL_00062 7.82e-204 rnhB 3.1.26.4 - L ko:K03470 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GDDEPIKL_00063 5.57e-270 - - - K - - - helix_turn _helix lactose operon repressor
GDDEPIKL_00064 0.0 fadD 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 AMP-binding enzyme
GDDEPIKL_00065 3.67e-47 - - - U ko:K02100 - ko00000,ko02000 Sugar (and other) transporter
GDDEPIKL_00066 3.25e-29 - - - U ko:K02100 - ko00000,ko02000 Sugar (and other) transporter
GDDEPIKL_00067 0.0 - - - V ko:K06147,ko:K06148,ko:K16013 ko02010,map02010 ko00000,ko00001,ko02000 ABC transporter transmembrane region
GDDEPIKL_00068 0.0 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDDEPIKL_00069 6.1e-76 - - - L - - - HTH-like domain
GDDEPIKL_00070 1.9e-31 - - - L - - - Transposase
GDDEPIKL_00072 4.34e-79 - - - L - - - Resolvase, N terminal domain
GDDEPIKL_00073 2.95e-266 - - - G ko:K10117 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDDEPIKL_00074 1.1e-160 - - - P ko:K02025,ko:K10118 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_00075 3.7e-166 - - - P ko:K10119 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport systems inner membrane component
GDDEPIKL_00076 0.0 - - - M - - - Protein of unknown function (DUF2961)
GDDEPIKL_00077 6.48e-300 - 3.2.1.26 GH32 G ko:K01193 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 32 family
GDDEPIKL_00078 1.29e-185 scrR - - K ko:K02529,ko:K03484 - ko00000,ko03000 helix_turn _helix lactose operon repressor
GDDEPIKL_00079 1.61e-65 - - - L - - - PFAM Integrase catalytic
GDDEPIKL_00080 5.05e-169 - - - L - - - PFAM Integrase catalytic
GDDEPIKL_00081 1.02e-07 - - - - - - - -
GDDEPIKL_00082 1.37e-149 - - - K - - - Fic/DOC family
GDDEPIKL_00083 2.07e-11 - - - - - - - -
GDDEPIKL_00084 6.67e-44 - - - - - - - -
GDDEPIKL_00090 2.92e-79 int8 - - L - - - Phage integrase family
GDDEPIKL_00091 4.54e-17 int8 - - L - - - Phage integrase family
GDDEPIKL_00092 0.000853 - - - L - - - Phage integrase family
GDDEPIKL_00093 1.16e-121 - - - - - - - -
GDDEPIKL_00094 0.0 sdaA 4.3.1.17 - E ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko01000 Serine dehydratase alpha chain
GDDEPIKL_00095 8.17e-98 fkbP 5.2.1.8 - G ko:K01802 - ko00000,ko01000 Peptidyl-prolyl cis-trans
GDDEPIKL_00096 7.1e-106 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GDDEPIKL_00097 7.18e-194 hlyIII - - S ko:K11068 - ko00000,ko02042 Haemolysin-III related
GDDEPIKL_00098 0.0 pdtaS 2.7.13.3 - T ko:K00936 - ko00000,ko00002,ko01000,ko01001,ko02022 ATPase histidine kinase DNA gyrase B HSP90 domain protein
GDDEPIKL_00099 8.13e-62 whiB - - K ko:K18955 - ko00000,ko03000 Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
GDDEPIKL_00100 0.0 - - - D ko:K03466 - ko00000,ko03036 FtsK/SpoIIIE family
GDDEPIKL_00101 3.61e-303 lytR2 - - K - - - Cell envelope-related transcriptional attenuator domain
GDDEPIKL_00102 2.06e-74 whiB2 - - K ko:K18955 - ko00000,ko03000 Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
GDDEPIKL_00103 0.0 - - - S - - - Glycosyl transferase, family 2
GDDEPIKL_00104 0.0 - - - - - - - -
GDDEPIKL_00105 1.23e-100 - - - S - - - Zincin-like metallopeptidase
GDDEPIKL_00106 2.92e-190 - - - T - - - Eukaryotic phosphomannomutase
GDDEPIKL_00107 9.12e-159 pyrE_1 - - S - - - Phosphoribosyl transferase domain
GDDEPIKL_00108 1.43e-249 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
GDDEPIKL_00109 3.51e-164 cseB - - T - - - Response regulator receiver domain protein
GDDEPIKL_00110 0.0 glgB 2.4.1.18 CBM48,GH13 G ko:K00700 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
GDDEPIKL_00111 2.16e-130 carD - - K ko:K07736 - ko00000,ko03000 CarD-like/TRCF domain
GDDEPIKL_00112 2.52e-114 ispF 2.7.7.60, 4.6.1.12 - H ko:K01770,ko:K12506 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
GDDEPIKL_00113 7.76e-175 znuB - - U ko:K02075 - ko00000,ko00002,ko02000 ABC 3 transport family
GDDEPIKL_00114 1.29e-206 - - - P ko:K02074 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
GDDEPIKL_00115 9.16e-265 - - - P ko:K02077 - ko00000,ko00002,ko02000 Zinc-uptake complex component A periplasmic
GDDEPIKL_00116 6.48e-211 folD 1.5.1.5, 3.5.4.9 - F ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
GDDEPIKL_00117 0.0 rpsA - - J ko:K02945 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein S1
GDDEPIKL_00118 9.58e-138 coaE 2.7.1.24 - H ko:K00859 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
GDDEPIKL_00119 0.0 uvrB - - L ko:K03702 ko03420,map03420 ko00000,ko00001,ko03400 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
GDDEPIKL_00120 2.2e-227 terC - - P ko:K05794 - ko00000 Integral membrane protein, TerC family
GDDEPIKL_00121 0.0 pyk 2.7.1.40 - G ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Pyruvate kinase
GDDEPIKL_00122 6.48e-142 aspA 3.6.1.13 - L ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 NUDIX domain
GDDEPIKL_00124 1.77e-168 pdtaR - - T ko:K22010 - ko00000,ko00002,ko02022 Response regulator receiver domain protein
GDDEPIKL_00125 0.0 polA 2.7.7.7 - L ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 ko00000,ko00001,ko01000,ko03032,ko03400 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GDDEPIKL_00126 1.89e-226 - - - L - - - NIF3 (NGG1p interacting factor 3)
GDDEPIKL_00127 4.87e-163 - - - L - - - NUDIX domain
GDDEPIKL_00128 0.0 glgX 3.2.1.68 CBM48,GH13 G ko:K01214 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the glycosyl hydrolase 13 family
GDDEPIKL_00129 1.09e-34 zntR - - K - - - bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
GDDEPIKL_00130 5e-116 - - - K - - - Putative zinc ribbon domain
GDDEPIKL_00131 7.23e-161 - - - S - - - GyrI-like small molecule binding domain
GDDEPIKL_00133 2.25e-28 - 3.2.2.20 - L ko:K01246 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Methyladenine glycosylase
GDDEPIKL_00135 2.85e-134 - - - L ko:K07450 - ko00000 Resolvase, N terminal domain
GDDEPIKL_00136 2.94e-188 - - GT2 M ko:K20534 - ko00000,ko01000,ko01005,ko02000 Glycosyl transferase family 2
GDDEPIKL_00137 1.74e-290 - - - GM ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
GDDEPIKL_00138 6.02e-184 tagG - - U ko:K01992 - ko00000,ko00002,ko02000 Transport permease protein
GDDEPIKL_00139 1.63e-260 rfbB 4.2.1.46 - M ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
GDDEPIKL_00140 0.0 rfbD 1.1.1.133, 5.1.3.13 - M ko:K00067,ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
GDDEPIKL_00141 1.61e-220 rfbA 2.7.7.24 - H ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
GDDEPIKL_00142 1.07e-286 - - - M - - - Glycosyl hydrolases family 25
GDDEPIKL_00143 2.67e-24 - - - - - - - -
GDDEPIKL_00144 6.86e-246 yvhJ - - K - - - Cell envelope-related transcriptional attenuator domain
GDDEPIKL_00145 0.0 - - - V - - - ABC transporter permease
GDDEPIKL_00146 1.32e-243 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
GDDEPIKL_00147 7.76e-184 - - - T ko:K06950 - ko00000 HD domain
GDDEPIKL_00148 8.58e-206 - - - S - - - Glutamine amidotransferase domain
GDDEPIKL_00149 0.0 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
GDDEPIKL_00150 3.31e-238 tatD - - L ko:K03424 - ko00000,ko01000 TatD related DNase
GDDEPIKL_00151 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter
GDDEPIKL_00152 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter
GDDEPIKL_00153 5.54e-29 - - - S ko:K06921 - ko00000 ATPase domain predominantly from Archaea
GDDEPIKL_00154 0.0 - - - S ko:K07133 - ko00000 Domain of unknown function (DUF4143)
GDDEPIKL_00155 8.8e-55 - - - G - - - Glycosyl hydrolases family 43
GDDEPIKL_00156 0.0 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding proteins, family 5 Middle
GDDEPIKL_00157 8.57e-227 - - - E ko:K02031,ko:K02032,ko:K10823 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
GDDEPIKL_00158 8.61e-227 oppC - - EP ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 N-terminal TM domain of oligopeptide transport permease C
GDDEPIKL_00159 8.66e-229 oppB1 - - EP ko:K02033 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_00160 0.0 - 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
GDDEPIKL_00161 7.04e-63 - - - - - - - -
GDDEPIKL_00162 0.0 metG 6.1.1.10 - J ko:K01874 ko00450,ko00970,map00450,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GDDEPIKL_00163 5.33e-156 - - - - - - - -
GDDEPIKL_00164 1.06e-235 rsmI 2.1.1.198 - H ko:K07056 - ko00000,ko01000,ko03009 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GDDEPIKL_00166 0.0 - - - G - - - MFS/sugar transport protein
GDDEPIKL_00167 3.69e-232 - 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
GDDEPIKL_00168 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter transmembrane region
GDDEPIKL_00169 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter, ATP-binding protein
GDDEPIKL_00170 9.48e-120 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
GDDEPIKL_00171 1.38e-10 - - - JM - - - Carbohydrate binding module (family 6)
GDDEPIKL_00173 2.92e-111 - - - L ko:K07485 - ko00000 Transposase
GDDEPIKL_00174 2.43e-34 - - - L ko:K07485 - ko00000 Transposase
GDDEPIKL_00175 4.11e-96 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Bacterial transferase hexapeptide repeat protein
GDDEPIKL_00176 4.43e-16 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Bacterial transferase hexapeptide repeat protein
GDDEPIKL_00177 1.81e-252 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
GDDEPIKL_00178 2.4e-185 - - - - - - - -
GDDEPIKL_00179 0.0 - 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 Glycosyl hydrolases family 35
GDDEPIKL_00180 8.64e-190 - - - U ko:K02057,ko:K10440 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Branched-chain amino acid transport system / permease component
GDDEPIKL_00181 0.0 - 3.6.3.17 - G ko:K10441 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
GDDEPIKL_00182 2.46e-270 - - - G ko:K10439 ko02010,ko02030,map02010,map02030 ko00000,ko00001,ko00002,ko02000 Periplasmic binding protein domain
GDDEPIKL_00183 5.48e-60 - - - L ko:K07485 - ko00000 Transposase
GDDEPIKL_00184 7.05e-290 - - - L - - - Belongs to the 'phage' integrase family
GDDEPIKL_00185 2.26e-246 - - - L - - - Phage integrase family
GDDEPIKL_00186 6.38e-259 - - - L ko:K03733 - ko00000,ko03036 Phage integrase, N-terminal SAM-like domain
GDDEPIKL_00188 9.07e-234 ppx 3.6.1.11, 3.6.1.40 - FP ko:K01524 ko00230,map00230 ko00000,ko00001,ko01000 Ppx/GppA phosphatase family
GDDEPIKL_00189 1.13e-132 - - - S ko:K09009 - ko00000 Protein of unknown function (DUF501)
GDDEPIKL_00190 4.64e-114 - - - D - - - Septum formation initiator
GDDEPIKL_00191 2.49e-313 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
GDDEPIKL_00192 7.72e-229 - - - C - - - Aldo/keto reductase family
GDDEPIKL_00193 0.0 mfd - - L ko:K03723 ko03420,map03420 ko00000,ko00001,ko01000,ko03400 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
GDDEPIKL_00194 4.23e-147 pth 3.1.1.29 - J ko:K01056 - ko00000,ko01000,ko03012 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
GDDEPIKL_00195 6.43e-119 - 2.3.1.183 - M ko:K03823 ko00440,ko01130,map00440,map01130 ko00000,ko00001,ko01000 Acetyltransferase (GNAT) domain
GDDEPIKL_00196 0.0 - - - S ko:K09118 - ko00000 Uncharacterised protein family (UPF0182)
GDDEPIKL_00197 1.05e-30 - 3.2.1.52 - G ko:K01207 ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501 ko00000,ko00001,ko00002,ko01000 Glycosyl hydrolase family 3 N-terminal domain protein
GDDEPIKL_00198 2.08e-115 - 3.2.1.52 - G ko:K01207 ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501 ko00000,ko00001,ko00002,ko01000 Glycosyl hydrolase family 3 N-terminal domain protein
GDDEPIKL_00199 1.1e-177 nadD 2.7.7.18 - H ko:K00969 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
GDDEPIKL_00200 2.28e-127 - - - - - - - -
GDDEPIKL_00201 1.15e-300 proA 1.2.1.41 - E ko:K00147 ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
GDDEPIKL_00202 0.0 thrC 4.2.3.1 - E ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Threonine synthase N terminus
GDDEPIKL_00203 7.19e-53 - - - S - - - Psort location Cytoplasmic, score
GDDEPIKL_00204 2.08e-93 - - - S - - - ABC-2 family transporter protein
GDDEPIKL_00205 1.12e-141 - - - S - - - ABC-2 family transporter protein
GDDEPIKL_00206 6.07e-223 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
GDDEPIKL_00207 3.46e-78 - - - K ko:K07979 - ko00000,ko03000 helix_turn_helix gluconate operon transcriptional repressor
GDDEPIKL_00208 3.33e-24 - - - J - - - Acetyltransferase (GNAT) domain
GDDEPIKL_00209 1.37e-17 - - - J - - - Acetyltransferase (GNAT) domain
GDDEPIKL_00210 2.23e-150 - - - S - - - Haloacid dehalogenase-like hydrolase
GDDEPIKL_00211 0.0 recN - - L ko:K03631 - ko00000,ko03400 May be involved in recombinational repair of damaged DNA
GDDEPIKL_00212 1.57e-235 nadK 2.7.1.23 - H ko:K00858 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GDDEPIKL_00214 5.33e-89 trkA - - P ko:K03499 - ko00000,ko02000 TrkA-N domain
GDDEPIKL_00215 1.59e-143 - - - - - - - -
GDDEPIKL_00216 1.28e-179 tlyA 2.1.1.226, 2.1.1.227 - J ko:K06442 - ko00000,ko01000,ko03009 Ribosomal RNA large subunit methyltransferase J
GDDEPIKL_00218 4.84e-257 - - - G - - - Haloacid dehalogenase-like hydrolase
GDDEPIKL_00219 2.07e-285 - - - L - - - Tetratricopeptide repeat
GDDEPIKL_00220 0.0 tyrS 6.1.1.1 - J ko:K01866 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
GDDEPIKL_00221 1.88e-129 - - - S - - - Protein of unknown function (DUF975)
GDDEPIKL_00222 1.13e-276 - - - S - - - Protein of unknown function (DUF975)
GDDEPIKL_00223 1.26e-169 - - - S - - - Putative ABC-transporter type IV
GDDEPIKL_00224 6.92e-133 - - - S ko:K06950 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
GDDEPIKL_00225 5.26e-84 - - - P - - - Rhodanese Homology Domain
GDDEPIKL_00226 3.41e-190 thiF 2.7.7.73, 2.7.7.80, 2.8.1.11 - H ko:K03148,ko:K21147 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000 ThiF family
GDDEPIKL_00227 1.02e-201 thiG 2.8.1.10 - H ko:K03149 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
GDDEPIKL_00228 3.55e-39 thiS - - H ko:K03154 ko04122,map04122 ko00000,ko00001 ThiS family
GDDEPIKL_00229 0.0 argH 4.3.2.1 - E ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 argininosuccinate lyase
GDDEPIKL_00230 1.62e-44 - - - L ko:K07473 - ko00000,ko02048 RelB antitoxin
GDDEPIKL_00231 1.72e-58 - - - S ko:K19158 - ko00000,ko01000,ko02048 YoeB-like toxin of bacterial type II toxin-antitoxin system
GDDEPIKL_00232 2.93e-42 - - - L - - - PFAM Integrase catalytic
GDDEPIKL_00233 3.43e-55 - - - L - - - PFAM Integrase catalytic
GDDEPIKL_00234 9.28e-58 - - - L - - - Transposase
GDDEPIKL_00235 2.82e-193 - - - L - - - IstB-like ATP binding protein
GDDEPIKL_00237 3.91e-246 - - - G - - - Acyltransferase family
GDDEPIKL_00238 1.19e-135 - - - S - - - EpsG family
GDDEPIKL_00240 3.88e-239 - - - M - - - Glycosyltransferase like family 2
GDDEPIKL_00241 1.42e-271 - - - S - - - Polysaccharide pyruvyl transferase
GDDEPIKL_00242 3.84e-171 - - - H - - - Hexapeptide repeat of succinyl-transferase
GDDEPIKL_00243 3.97e-255 - - - M - - - Glycosyltransferase like family 2
GDDEPIKL_00244 0.0 - - - S - - - Polysaccharide biosynthesis protein
GDDEPIKL_00245 1.1e-296 - - - M ko:K00713 - ko00000,ko01000,ko01003,ko01005 Glycosyl transferases group 1
GDDEPIKL_00246 1.58e-259 - - GT4 M ko:K19424 - ko00000,ko01000,ko01003 Psort location Cytoplasmic, score 8.87
GDDEPIKL_00247 8.82e-141 etp 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Low molecular weight phosphatase family
GDDEPIKL_00248 2.12e-277 rfbP - - M - - - Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
GDDEPIKL_00249 0.0 - - - H - - - Protein of unknown function (DUF4012)
GDDEPIKL_00250 4.2e-185 - - - U - - - Drug resistance MFS transporter, drug H antiporter-2 family
GDDEPIKL_00251 2.1e-152 - - - U - - - Drug resistance MFS transporter, drug H antiporter-2 family
GDDEPIKL_00252 6.72e-302 mntH - - P ko:K03322 - ko00000,ko02000 H( )-stimulated, divalent metal cation uptake system
GDDEPIKL_00253 6.38e-182 - - - L - - - Protein of unknown function (DUF1524)
GDDEPIKL_00254 7.6e-213 - - - S - - - Oxidoreductase, aldo keto reductase family protein
GDDEPIKL_00255 0.0 galA 3.2.1.89 - G ko:K01224 - ko00000,ko01000 Glycosyl hydrolase family 53
GDDEPIKL_00256 1e-246 - - - K - - - helix_turn _helix lactose operon repressor
GDDEPIKL_00257 0.0 bga1 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
GDDEPIKL_00258 1.01e-43 - - - L ko:K07485 - ko00000 Transposase
GDDEPIKL_00259 3.77e-09 - - - L ko:K07485 - ko00000 Transposase
GDDEPIKL_00260 1.52e-59 - - - L - - - Transposase DDE domain
GDDEPIKL_00261 8.65e-53 - - - L - - - Transposase
GDDEPIKL_00262 0.0 - - - E ko:K03293 - ko00000 Amino acid permease
GDDEPIKL_00263 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
GDDEPIKL_00264 2.49e-165 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
GDDEPIKL_00265 0.0 aroP - - E ko:K03293,ko:K11732 - ko00000,ko02000 aromatic amino acid transport protein AroP K03293
GDDEPIKL_00266 8.13e-137 - - - S - - - Protein of unknown function, DUF624
GDDEPIKL_00267 4.49e-196 - - - G ko:K02026,ko:K10119 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
GDDEPIKL_00268 3.16e-198 msmF - - G ko:K10118 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_00269 1.7e-236 - - - K - - - Psort location Cytoplasmic, score
GDDEPIKL_00270 0.0 amyE - - G ko:K10117 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDDEPIKL_00271 1.29e-132 gpm2 3.1.3.73 - G ko:K02226 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 Phosphoglycerate mutase family
GDDEPIKL_00272 6.43e-79 - - - S - - - Protein of unknown function (DUF4235)
GDDEPIKL_00273 9.42e-119 nfrA - - C - - - Nitroreductase family
GDDEPIKL_00274 4.19e-46 nfrA - - C - - - Nitroreductase family
GDDEPIKL_00275 0.0 - - - S ko:K01421 - ko00000 YhgE Pip domain protein
GDDEPIKL_00276 0.0 - - - S ko:K01421 - ko00000 YhgE Pip domain protein
GDDEPIKL_00277 6.32e-55 - - - - - - - -
GDDEPIKL_00278 2.11e-219 - 1.1.1.339 - GM ko:K19180 ko00523,ko01130,map00523,map01130 ko00000,ko00001,ko01000 NAD dependent epimerase/dehydratase family
GDDEPIKL_00279 1.16e-243 - - - I - - - Acyltransferase family
GDDEPIKL_00280 0.0 - - - M ko:K07272 - ko00000,ko01000,ko01003,ko01005 Rhamnan synthesis protein F
GDDEPIKL_00281 2.72e-316 - - - S - - - Polysaccharide pyruvyl transferase
GDDEPIKL_00282 0.0 - - - S - - - Glucosyl transferase GtrII
GDDEPIKL_00284 9.01e-95 - - - S - - - KAP family P-loop domain
GDDEPIKL_00285 2.15e-192 - - - S - - - KAP family P-loop domain
GDDEPIKL_00287 0.0 - - - L - - - Transposase
GDDEPIKL_00289 2.06e-49 - - - K ko:K03088 - ko00000,ko03021 Psort location Cytoplasmic, score
GDDEPIKL_00292 1.47e-136 bcp 1.11.1.15 - O ko:K03564 - ko00000,ko01000 Redoxin
GDDEPIKL_00293 1.04e-182 - - - - - - - -
GDDEPIKL_00294 2.82e-31 - - - L - - - Transposase, Mutator family
GDDEPIKL_00295 1.68e-227 - - - I - - - alpha/beta hydrolase fold
GDDEPIKL_00296 1.16e-118 lppD - - S - - - Appr-1'-p processing enzyme
GDDEPIKL_00297 1.99e-187 - - - S - - - phosphoesterase or phosphohydrolase
GDDEPIKL_00298 4.16e-181 tenA 3.5.99.2 - K ko:K03707 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03000 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
GDDEPIKL_00300 1.19e-169 - - - S ko:K06999 - ko00000 Phospholipase/Carboxylesterase
GDDEPIKL_00301 4.3e-255 trmI 2.1.1.219, 2.1.1.220 - J ko:K07442 - ko00000,ko01000,ko03016 Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
GDDEPIKL_00302 1.38e-127 sixA - - T ko:K08296 - ko00000,ko01000 Phosphoglycerate mutase family
GDDEPIKL_00304 0.0 metE 2.1.1.14 - E ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
GDDEPIKL_00305 9.57e-209 metF 1.5.1.20 - E ko:K00297 ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523 ko00000,ko00001,ko00002,ko01000 Methylenetetrahydrofolate reductase
GDDEPIKL_00306 1.2e-239 cbh 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
GDDEPIKL_00307 0.0 glnE 2.7.7.42, 2.7.7.89 - H ko:K00982 - ko00000,ko01000 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
GDDEPIKL_00308 5.17e-228 pyrB 2.1.3.2 - F ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
GDDEPIKL_00309 2.61e-96 pyrI - - F ko:K00610 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002 Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
GDDEPIKL_00310 0.0 pyrC 3.5.2.3 - F ko:K01465 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
GDDEPIKL_00311 6.06e-224 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the OMP decarboxylase family. Type 2 subfamily
GDDEPIKL_00312 2.25e-202 pyrK - - C ko:K02823 ko00240,ko01100,map00240,map01100 ko00000,ko00001 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
GDDEPIKL_00313 4.86e-233 pyrD 1.3.1.14 - F ko:K17828 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
GDDEPIKL_00314 4.64e-160 pyrE 2.4.2.10 - F ko:K00762 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GDDEPIKL_00315 8.87e-39 - - - - - - - -
GDDEPIKL_00316 3.01e-275 - - - S - - - Psort location Cytoplasmic, score 8.87
GDDEPIKL_00317 1.55e-221 - - - K - - - Bacterial regulatory helix-turn-helix protein, lysR family
GDDEPIKL_00318 1.93e-157 - 3.8.1.2 - S ko:K01560,ko:K07025 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
GDDEPIKL_00319 0.0 nnrD 4.2.1.136, 5.1.99.6 - H ko:K17758,ko:K17759 - ko00000,ko01000 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
GDDEPIKL_00320 0.0 ybiT - - S ko:K06158 - ko00000,ko03012 ABC transporter
GDDEPIKL_00321 6.37e-169 - - - S - - - Enoyl-(Acyl carrier protein) reductase
GDDEPIKL_00322 6.87e-72 - - - P ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
GDDEPIKL_00323 6.73e-76 - - - P ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
GDDEPIKL_00324 9.21e-64 - - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Cobalt transport protein
GDDEPIKL_00325 2.22e-41 - - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Cobalt transport protein
GDDEPIKL_00326 1.43e-296 - 2.6.1.1 - E ko:K11358 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko01000,ko01007 Psort location Cytoplasmic, score 8.87
GDDEPIKL_00327 0.0 uvrA - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
GDDEPIKL_00328 0.0 uvrC - - L ko:K03703 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
GDDEPIKL_00329 8.83e-242 aroE 1.1.1.25 - E ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Shikimate dehydrogenase substrate binding domain
GDDEPIKL_00330 5.67e-231 yvcJ - - S ko:K06958 - ko00000,ko03019 Displays ATPase and GTPase activities
GDDEPIKL_00331 2.86e-217 whiA - - K ko:K09762 - ko00000 May be required for sporulation
GDDEPIKL_00332 1.02e-278 pgk 2.7.2.3, 5.3.1.1 - F ko:K00927,ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Phosphoglycerate kinase
GDDEPIKL_00333 1.7e-188 tpiA 5.3.1.1 - G ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
GDDEPIKL_00334 2.51e-47 secG - - U ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase SecG subunit
GDDEPIKL_00335 4.81e-225 ldh 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily
GDDEPIKL_00336 6.7e-204 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
GDDEPIKL_00337 0.0 aspC 2.6.1.1, 2.6.1.2, 2.6.1.66 - E ko:K00812,ko:K08969,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase, class I II
GDDEPIKL_00338 7.19e-248 - - - - - - - -
GDDEPIKL_00339 3.05e-303 brnQ - - U ko:K03311 - ko00000 Component of the transport system for branched-chain amino acids
GDDEPIKL_00340 2.71e-259 tal 2.2.1.2 - H ko:K00616 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
GDDEPIKL_00341 0.0 tkt 2.2.1.1 - H ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the transketolase family
GDDEPIKL_00342 4.92e-245 hrcA - - K ko:K03705 - ko00000,ko03000 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
GDDEPIKL_00343 2.29e-274 dnaJ - - O ko:K03686 - ko00000,ko03029,ko03110 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
GDDEPIKL_00344 7.54e-200 - - - G - - - Fructosamine kinase
GDDEPIKL_00345 1.51e-201 uppP 3.6.1.27 - V ko:K06153 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
GDDEPIKL_00346 4.38e-169 - - - S - - - PAC2 family
GDDEPIKL_00352 0.0 thrS 6.1.1.3 - J ko:K01868 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GDDEPIKL_00353 3.78e-143 - 2.7.7.53 - FG ko:K19710 ko00230,map00230 ko00000,ko00001,ko01000 HIT domain
GDDEPIKL_00354 1.19e-156 yebC - - K - - - transcriptional regulatory protein
GDDEPIKL_00355 4.21e-131 ruvC 3.1.22.4 - L ko:K01159 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
GDDEPIKL_00356 5.04e-139 ruvA 3.6.4.12 - L ko:K03550 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
GDDEPIKL_00357 1.82e-255 ruvB 3.6.4.12 - L ko:K03551 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
GDDEPIKL_00358 5.33e-73 yajC - - U ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase subunit
GDDEPIKL_00359 5.54e-131 apt 2.4.2.7 - F ko:K00759 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000,ko04147 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
GDDEPIKL_00360 1.2e-281 sucC 6.2.1.5 - F ko:K01903 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
GDDEPIKL_00361 3.07e-210 sucD 6.2.1.5 - C ko:K01902 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
GDDEPIKL_00362 1.39e-296 - - - - - - - -
GDDEPIKL_00363 0.0 purH 2.1.2.3, 3.5.4.10 - F ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 ko00000,ko00001,ko00002,ko01000,ko04147 Bifunctional purine biosynthesis protein PurH
GDDEPIKL_00364 2.5e-43 - - - - - - - -
GDDEPIKL_00365 1.34e-181 - - - U ko:K06188 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
GDDEPIKL_00366 1.57e-184 rluB 5.4.99.19, 5.4.99.22 - J ko:K06178,ko:K06183 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
GDDEPIKL_00367 0.0 der - - F ko:K03977 - ko00000,ko03009 GTPase that plays an essential role in the late steps of ribosome biogenesis
GDDEPIKL_00369 4.56e-209 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
GDDEPIKL_00370 0.0 ugp 2.7.7.9 - G ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 UTP-glucose-1-phosphate uridylyltransferase
GDDEPIKL_00371 0.0 - - - K - - - WYL domain
GDDEPIKL_00372 4.22e-70 - - - - - - - -
GDDEPIKL_00373 0.0 helY - - L ko:K03727 - ko00000,ko01000 DEAD DEAH box helicase
GDDEPIKL_00374 3.18e-81 rbpA - - K - - - Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
GDDEPIKL_00375 2.61e-179 nt5e 3.1.3.18 - S ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 ko00000,ko00001,ko01000 HAD-hyrolase-like
GDDEPIKL_00376 2.44e-50 - - - - - - - -
GDDEPIKL_00377 4.37e-84 - - - - - - - -
GDDEPIKL_00378 3.04e-141 merR2 - - K - - - helix_turn_helix, mercury resistance
GDDEPIKL_00379 2.02e-97 garA - - T - - - Inner membrane component of T3SS, cytoplasmic domain
GDDEPIKL_00380 2.17e-179 - - - S - - - Bacterial protein of unknown function (DUF881)
GDDEPIKL_00381 6.08e-61 sbp - - S - - - Protein of unknown function (DUF1290)
GDDEPIKL_00382 7.29e-220 - - - S - - - Bacterial protein of unknown function (DUF881)
GDDEPIKL_00383 6.65e-138 pgsA2 2.7.8.41, 2.7.8.5 - I ko:K00995,ko:K08744 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GDDEPIKL_00384 3.05e-200 hisG 2.4.2.17 - F ko:K00765,ko:K02502 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 ATP phosphoribosyltransferase
GDDEPIKL_00385 5.07e-56 hisE 3.6.1.31 - E ko:K01523 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Phosphoribosyl-ATP pyrophosphohydrolase
GDDEPIKL_00386 7.16e-155 rpe 5.1.3.1 - G ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Ribulose-phosphate 3-epimerase
GDDEPIKL_00387 5.51e-240 lgt - - M - - - Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
GDDEPIKL_00388 7.23e-207 trpA 4.2.1.20 - E ko:K01695 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
GDDEPIKL_00389 0.0 trpB 4.2.1.20 - E ko:K01696 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
GDDEPIKL_00390 3.05e-169 - - - S - - - SOS response associated peptidase (SRAP)
GDDEPIKL_00391 3.3e-200 nfo 3.1.21.2 - L ko:K01151 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
GDDEPIKL_00392 0.0 - - - E ko:K16235 - ko00000,ko02000 amino acid
GDDEPIKL_00393 4.07e-76 - - - EGP - - - Major Facilitator Superfamily
GDDEPIKL_00394 2.96e-241 - - - V - - - VanZ like family
GDDEPIKL_00395 7.7e-81 cefD 5.1.1.17 - E ko:K04127 ko00311,ko01100,ko01130,map00311,map01100,map01130 ko00000,ko00001,ko00002,ko01000 Aminotransferase, class V
GDDEPIKL_00396 1.1e-129 - - - S - - - Acetyltransferase (GNAT) domain
GDDEPIKL_00397 1.5e-65 - - - - - - - -
GDDEPIKL_00398 1.39e-155 - - - - - - - -
GDDEPIKL_00401 6.56e-19 - - - T - - - Histidine kinase
GDDEPIKL_00402 3.3e-261 - - - T - - - Histidine kinase
GDDEPIKL_00403 3.69e-166 - - - K - - - helix_turn_helix, Lux Regulon
GDDEPIKL_00404 5.1e-125 - - - - - - - -
GDDEPIKL_00405 2.91e-200 - - - M - - - Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GDDEPIKL_00406 7.99e-119 - - - Q ko:K02003 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
GDDEPIKL_00407 7.81e-235 - - - V ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
GDDEPIKL_00408 1.27e-54 - - - L ko:K07473 - ko00000,ko02048 RelB antitoxin
GDDEPIKL_00409 8.87e-66 - - - S ko:K19157 - ko00000,ko01000,ko02048 Bacterial toxin of type II toxin-antitoxin system, YafQ
GDDEPIKL_00411 6.57e-125 - - - K ko:K03088 - ko00000,ko03021 Sigma-70 region 2
GDDEPIKL_00413 3.55e-139 - - - - - - - -
GDDEPIKL_00414 2.87e-173 - - - - ko:K01992 - ko00000,ko00002,ko02000 -
GDDEPIKL_00415 2.73e-207 - - - V - - - ATPases associated with a variety of cellular activities
GDDEPIKL_00416 3.5e-93 - - - - - - - -
GDDEPIKL_00417 3.95e-82 - - - - - - - -
GDDEPIKL_00418 2.76e-191 - - - S ko:K11939 - ko00000,ko02000 EamA-like transporter family
GDDEPIKL_00419 5.85e-133 - - - - - - - -
GDDEPIKL_00420 3.51e-165 - - - - - - - -
GDDEPIKL_00421 2.23e-156 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
GDDEPIKL_00423 1.31e-32 - - - - - - - -
GDDEPIKL_00424 3.98e-143 - - - - - - - -
GDDEPIKL_00425 2.36e-61 - - - K ko:K20391 ko02024,map02024 ko00000,ko00001,ko03000 sequence-specific DNA binding
GDDEPIKL_00426 6.89e-63 hipA 2.7.11.1 - S ko:K07154 - ko00000,ko01000,ko01001,ko02048 kinase activity
GDDEPIKL_00428 5.41e-52 - - - EGP - - - Major Facilitator Superfamily
GDDEPIKL_00429 1.77e-27 - - - G - - - Major facilitator Superfamily
GDDEPIKL_00430 0.0 - - - E ko:K16235 - ko00000,ko02000 amino acid
GDDEPIKL_00431 5.32e-11 - - - - - - - -
GDDEPIKL_00432 5.5e-84 - - - K - - - Protein of unknown function, DUF488
GDDEPIKL_00433 5.87e-99 - - - - - - - -
GDDEPIKL_00434 9.65e-227 - - - - - - - -
GDDEPIKL_00435 5.16e-84 - - - S ko:K09974 - ko00000 Domain of unknown function (DUF1287)
GDDEPIKL_00436 0.0 trpE 4.1.3.27 - E ko:K01657 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
GDDEPIKL_00437 2.28e-93 hisI 3.5.4.19, 3.6.1.31 - E ko:K01496,ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
GDDEPIKL_00438 4.13e-180 hisF 4.1.3.27 - E ko:K01657,ko:K02500 ko00340,ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00340,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
GDDEPIKL_00439 1.61e-91 - 3.5.1.124 - S ko:K05520 - ko00000,ko01000,ko01002 DJ-1/PfpI family
GDDEPIKL_00440 1.36e-286 rlmN 2.1.1.192 - J ko:K06941 - ko00000,ko01000,ko03009 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
GDDEPIKL_00441 8.23e-223 cdsA 2.7.7.41 - I ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 ko00000,ko00001,ko00002,ko01000 Cytidylyltransferase family
GDDEPIKL_00442 4.97e-120 frr - - J ko:K02838 - ko00000,ko03012 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
GDDEPIKL_00443 3.81e-171 pyrH 2.7.4.22 - F ko:K09903 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphorylation of UMP to UDP
GDDEPIKL_00444 7.92e-187 tsf - - J ko:K02357 - ko00000,ko03012,ko03029 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
GDDEPIKL_00445 2.69e-192 rpsB - - J ko:K02967 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS2 family
GDDEPIKL_00446 1.96e-113 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GDDEPIKL_00447 0.0 fadD3 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 long-chain-fatty acid CoA ligase
GDDEPIKL_00448 5.83e-120 - - - - - - - -
GDDEPIKL_00449 8.81e-264 guaB3 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 IMP dehydrogenase family protein
GDDEPIKL_00450 8.16e-308 icd 1.1.1.42 - C ko:K00031 ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146 br01601,ko00000,ko00001,ko00002,ko01000 Belongs to the isocitrate and isopropylmalate dehydrogenases family
GDDEPIKL_00451 0.0 - - - G - - - ABC transporter substrate-binding protein
GDDEPIKL_00452 3.7e-125 - - - M - - - Peptidase family M23
GDDEPIKL_00453 7.36e-222 - - - L - - - Phage integrase family
GDDEPIKL_00455 6.82e-170 - - - S - - - Nucleotidyl transferase AbiEii toxin, Type IV TA system
GDDEPIKL_00456 1.72e-111 - - - K - - - Psort location Cytoplasmic, score
GDDEPIKL_00457 8.77e-37 - - - S - - - Fic/DOC family
GDDEPIKL_00461 2.71e-28 - - - S - - - Antirestriction protein (ArdA)
GDDEPIKL_00463 9.84e-110 - - - M ko:K21688 - ko00000 G5 domain protein
GDDEPIKL_00464 1.82e-85 - - - - - - - -
GDDEPIKL_00467 1.69e-301 - 5.99.1.2 - L ko:K03169 - ko00000,ko01000,ko03032 DNA topoisomerase
GDDEPIKL_00470 1.36e-19 - - - K - - - Bacterial mobilisation protein (MobC)
GDDEPIKL_00471 4.16e-32 - - - S - - - Pfam:CtkA_N
GDDEPIKL_00473 6.45e-67 - - - L - - - EcoRII C terminal
GDDEPIKL_00474 6.27e-30 - - - L - - - PFAM Relaxase mobilization nuclease family protein
GDDEPIKL_00475 1.23e-183 - - - S - - - Fic/DOC family
GDDEPIKL_00476 3.52e-173 - - - L - - - PFAM Relaxase mobilization nuclease family protein
GDDEPIKL_00477 6.35e-36 - 2.7.11.1 - S ko:K07154 - ko00000,ko01000,ko01001,ko02048 Pfam:HipA_N
GDDEPIKL_00479 1.45e-45 - - - - - - - -
GDDEPIKL_00480 8.41e-63 - - - S - - - Domain of unknown function (DUF4913)
GDDEPIKL_00481 6.39e-288 - - - U - - - TraM recognition site of TraD and TraG
GDDEPIKL_00482 1e-28 - - - - - - - -
GDDEPIKL_00486 2.02e-248 - - - S - - - COG0433 Predicted ATPase
GDDEPIKL_00487 4.38e-237 - - - - - - - -
GDDEPIKL_00488 4.45e-200 - - - - - - - -
GDDEPIKL_00489 5.19e-41 - - - - - - - -
GDDEPIKL_00490 4.25e-44 - - - - - - - -
GDDEPIKL_00493 2.85e-317 - - - D - - - Cell surface antigen C-terminus
GDDEPIKL_00494 8.94e-51 - - - - ko:K03646 - ko00000,ko02000 -
GDDEPIKL_00495 1.21e-44 - - - - - - - -
GDDEPIKL_00496 6.12e-30 - - - - - - - -
GDDEPIKL_00498 2.84e-38 - - - D ko:K03496 - ko00000,ko03036,ko04812 VirC1 protein
GDDEPIKL_00500 3.83e-14 - - - K - - - Helix-turn-helix domain
GDDEPIKL_00506 3.64e-24 - - - - - - - -
GDDEPIKL_00509 1.32e-249 tsaD 2.3.1.234 - O ko:K01409 - ko00000,ko01000,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
GDDEPIKL_00510 6.98e-137 rimI 2.3.1.128 - K ko:K03789 - ko00000,ko01000,ko03009 FR47-like protein
GDDEPIKL_00511 1.45e-203 yeaZ - - O ko:K14742 - ko00000,ko03016 Glycoprotease family
GDDEPIKL_00512 2.49e-111 tsaE - - S ko:K06925 - ko00000,ko03016 Threonylcarbamoyl adenosine biosynthesis protein TsaE
GDDEPIKL_00513 2.06e-220 holA 2.7.7.7 - L ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III delta subunit
GDDEPIKL_00514 0.0 comEC - - S ko:K02238 - ko00000,ko00002,ko02044 Competence protein
GDDEPIKL_00515 1.75e-145 comEA - - L ko:K02237 - ko00000,ko00002,ko02044 Helix-hairpin-helix motif
GDDEPIKL_00516 0.0 leuS 6.1.1.4 - J ko:K01869 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Belongs to the class-I aminoacyl-tRNA synthetase family
GDDEPIKL_00517 2.62e-206 - - - ET ko:K10005 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial periplasmic substrate-binding proteins
GDDEPIKL_00518 4.06e-217 corA - - P ko:K03284 - ko00000,ko02000 CorA-like Mg2+ transporter protein
GDDEPIKL_00519 2.1e-215 gpmB 3.1.3.85, 5.4.2.11 - G ko:K01834,ko:K22306 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Phosphoglycerate mutase family
GDDEPIKL_00520 2.98e-296 - - - L - - - ribosomal rna small subunit methyltransferase
GDDEPIKL_00521 2.35e-92 pdxH - - S ko:K07006 - ko00000 Pfam:Pyridox_oxidase
GDDEPIKL_00522 3.5e-220 - - - EG - - - EamA-like transporter family
GDDEPIKL_00523 6.15e-170 - - - C - - - Putative TM nitroreductase
GDDEPIKL_00524 2.26e-41 - - - - - - - -
GDDEPIKL_00525 0.0 - - - S ko:K09704 - ko00000 Metal-independent alpha-mannosidase (GH125)
GDDEPIKL_00526 6.16e-301 - - - G - - - N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
GDDEPIKL_00527 2.66e-266 - - - K - - - helix_turn _helix lactose operon repressor
GDDEPIKL_00528 0.0 - 3.2.1.96 - G ko:K01227 ko00511,map00511 ko00000,ko00001,ko01000 Glycosyl hydrolase family 85
GDDEPIKL_00529 0.0 - - - G - - - Belongs to the glycosyl hydrolase 31 family
GDDEPIKL_00530 0.0 - - - G - - - Belongs to the glycosyl hydrolase 5 (cellulase A) family
GDDEPIKL_00531 3.57e-200 - - - G ko:K02026 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_00532 4.6e-221 - - - G ko:K02025,ko:K17330 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_00533 1.01e-312 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDDEPIKL_00534 0.0 - 3.2.1.24 GH38 G ko:K01191 ko00511,map00511 ko00000,ko00001,ko01000,ko04131 Alpha mannosidase, middle domain
GDDEPIKL_00535 0.0 - 3.2.1.24 GH38 G ko:K01191 ko00511,map00511 ko00000,ko00001,ko01000,ko04131 Alpha mannosidase, middle domain
GDDEPIKL_00536 0.0 - 3.2.1.24 GH38 G ko:K01191 ko00511,map00511 ko00000,ko00001,ko01000,ko04131 Alpha mannosidase, middle domain
GDDEPIKL_00537 3.13e-19 intA - - L - - - Phage integrase family
GDDEPIKL_00538 2.79e-53 - - - - - - - -
GDDEPIKL_00539 9.93e-220 - - - S - - - Fic/DOC family
GDDEPIKL_00540 0.0 - - - S - - - HipA-like C-terminal domain
GDDEPIKL_00542 1.31e-98 - - - - - - - -
GDDEPIKL_00543 4.67e-132 ppiA 5.2.1.8 - G ko:K03767,ko:K03768 ko01503,ko04217,map01503,map04217 ko00000,ko00001,ko01000,ko03110,ko04147 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
GDDEPIKL_00544 0.0 relA 2.7.6.5, 3.1.7.2 - KT ko:K00951,ko:K01139 ko00230,map00230 ko00000,ko00001,ko01000,ko03009 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GDDEPIKL_00545 5.02e-110 dut 3.6.1.23 - F ko:K01520 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
GDDEPIKL_00546 4.95e-63 - - - S - - - Domain of unknown function (DUF4193)
GDDEPIKL_00547 1.51e-212 - - - S - - - Protein of unknown function (DUF3071)
GDDEPIKL_00548 2e-296 - - - S - - - Type I phosphodiesterase / nucleotide pyrophosphatase
GDDEPIKL_00549 0.0 gyrA2 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 DNA topoisomerase (ATP-hydrolyzing)
GDDEPIKL_00553 0.0 lhr - - L ko:K03724 - ko00000,ko01000,ko03400 DEAD DEAH box helicase
GDDEPIKL_00554 1.73e-220 rbsK 2.7.1.15 - H ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GDDEPIKL_00555 2.17e-285 - - - G - - - Major Facilitator Superfamily
GDDEPIKL_00556 0.0 gyrB2 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 DNA topoisomerase (ATP-hydrolyzing)
GDDEPIKL_00557 1.24e-248 sigA - - K ko:K03086 - ko00000,ko03021 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
GDDEPIKL_00558 6.88e-146 - - - - - - - -
GDDEPIKL_00559 7.55e-247 idsA 2.5.1.1, 2.5.1.10, 2.5.1.29 - H ko:K13787 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the FPP GGPP synthase family
GDDEPIKL_00560 0.0 pknL 2.7.11.1 - KLT ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 PASTA
GDDEPIKL_00561 2.4e-169 plsC2 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Phosphate acyltransferases
GDDEPIKL_00562 1.33e-158 - - - - - - - -
GDDEPIKL_00563 4.78e-248 trpD 2.4.2.18 - F ko:K00766 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
GDDEPIKL_00564 0.0 secA - - U ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
GDDEPIKL_00565 6.14e-155 hpf - - J ko:K05808 - ko00000,ko03009 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GDDEPIKL_00566 2.62e-132 recX - - S ko:K03565 - ko00000,ko03400 Modulates RecA activity
GDDEPIKL_00567 1.29e-261 recA - - L ko:K03553 ko03440,map03440 ko00000,ko00001,ko00002,ko03400 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GDDEPIKL_00568 9.3e-42 - - - S - - - Protein of unknown function (DUF3046)
GDDEPIKL_00569 1.39e-102 - - - K - - - Helix-turn-helix XRE-family like proteins
GDDEPIKL_00570 5.61e-127 cinA 3.5.1.42 - S ko:K03743 ko00760,map00760 ko00000,ko00001,ko01000 Belongs to the CinA family
GDDEPIKL_00571 5.95e-153 pgsA 2.7.8.41, 2.7.8.5 - I ko:K00995,ko:K08744 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GDDEPIKL_00572 0.0 ftsK - - D ko:K03466 - ko00000,ko03036 FtsK SpoIIIE family protein
GDDEPIKL_00573 9.15e-192 fic - - D ko:K04095 - ko00000,ko03036 Fic/DOC family
GDDEPIKL_00574 7.74e-232 miaA 2.5.1.75 - F ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 ko00000,ko00001,ko01000,ko01006,ko03016 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
GDDEPIKL_00575 0.0 miaB 2.8.4.3 - H ko:K06168 - ko00000,ko01000,ko03016 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
GDDEPIKL_00576 1.99e-192 ywaC 2.7.6.5 - S ko:K07816 ko00230,map00230 ko00000,ko00001,ko01000 Region found in RelA / SpoT proteins
GDDEPIKL_00577 4.49e-209 - - - EG - - - EamA-like transporter family
GDDEPIKL_00578 8.12e-175 - - - S ko:K06890 - ko00000 Belongs to the BI1 family
GDDEPIKL_00579 6.03e-141 - - - K - - - helix_turn_helix, Lux Regulon
GDDEPIKL_00580 2.33e-155 - - - E - - - Psort location Cytoplasmic, score 8.87
GDDEPIKL_00581 0.0 acnA 4.2.1.3 - C ko:K01681 ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
GDDEPIKL_00582 0.0 ctpE - - P ko:K12952 - ko00000,ko01000 E1-E2 ATPase
GDDEPIKL_00583 2.62e-127 - - - - - - - -
GDDEPIKL_00584 1.31e-306 rumA 2.1.1.190 - J ko:K03215 - ko00000,ko01000,ko03009 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GDDEPIKL_00585 2.99e-174 - - - S - - - Protein of unknown function (DUF3159)
GDDEPIKL_00586 2.93e-197 - - - S - - - Protein of unknown function (DUF3710)
GDDEPIKL_00587 1.13e-217 xth 3.1.11.2 - L ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Endonuclease/Exonuclease/phosphatase family
GDDEPIKL_00588 0.0 - - - EP ko:K02031,ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Oligopeptide/dipeptide transporter, C-terminal region
GDDEPIKL_00589 2.81e-233 dppC - - EP ko:K02034,ko:K15582 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 N-terminal TM domain of oligopeptide transport permease C
GDDEPIKL_00590 1.39e-204 dppB - - EP ko:K02033,ko:K15581 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_00591 0.0 dppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substrate-binding protein, family 5
GDDEPIKL_00592 5.73e-240 xerC - - D ko:K03733,ko:K04763 - ko00000,ko03036 Belongs to the 'phage' integrase family. XerC subfamily
GDDEPIKL_00593 7.44e-190 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
GDDEPIKL_00594 0.0 - - - MV ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
GDDEPIKL_00595 2.36e-56 - - - - - - - -
GDDEPIKL_00596 2.35e-243 tyrA 1.3.1.12 - E ko:K00210,ko:K04517 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Prephenate dehydrogenase
GDDEPIKL_00597 3.21e-241 pheA 4.2.1.51, 5.4.99.5 - E ko:K04518,ko:K14170 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Prephenate dehydratase
GDDEPIKL_00598 2.23e-102 - - - - - - - -
GDDEPIKL_00599 0.0 typA - - T ko:K06207 - ko00000 Elongation factor G C-terminus
GDDEPIKL_00600 2.95e-139 - - - K - - - Virulence activator alpha C-term
GDDEPIKL_00601 5.21e-177 - - - V ko:K02003 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
GDDEPIKL_00602 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
GDDEPIKL_00603 4.83e-24 nanT - - U ko:K03290,ko:K08178,ko:K08369 - ko00000,ko02000 Sugar (and other) transporter
GDDEPIKL_00604 2.1e-305 iscS1 2.8.1.7 - E ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Aminotransferase class-V
GDDEPIKL_00605 2.16e-207 nadC 2.4.2.19 - H ko:K00767 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Quinolinate phosphoribosyl transferase, N-terminal domain
GDDEPIKL_00606 0.0 nadB 1.4.3.16, 2.4.2.19 - H ko:K00278,ko:K00767 ko00250,ko00760,ko01100,map00250,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of L-aspartate to iminoaspartate
GDDEPIKL_00607 0.0 nadA 2.5.1.72 - H ko:K03517 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
GDDEPIKL_00608 3.89e-205 - 3.6.1.55 - F ko:K03574 - ko00000,ko01000,ko03400 NUDIX hydrolase
GDDEPIKL_00609 1.81e-149 scpB - - D ko:K06024 - ko00000,ko03036 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
GDDEPIKL_00610 9.39e-195 scpA - - D ko:K05896 - ko00000,ko03036 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
GDDEPIKL_00611 2.4e-193 soj - - D ko:K03496 - ko00000,ko03036,ko04812 CobQ CobB MinD ParA nucleotide binding domain protein
GDDEPIKL_00612 1.42e-201 xerD - - D ko:K03733,ko:K04763 - ko00000,ko03036 recombinase XerD
GDDEPIKL_00613 7.46e-245 glxK 2.7.1.165 - G ko:K00865 ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130 ko00000,ko00001,ko01000 Belongs to the glycerate kinase type-1 family
GDDEPIKL_00614 1.32e-206 - - - EG ko:K03299 - ko00000,ko02000 GntP family permease
GDDEPIKL_00615 7.67e-114 - - - KT ko:K02647 - ko00000,ko03000 Putative sugar diacid recognition
GDDEPIKL_00616 7.76e-81 rplT - - J ko:K02887 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
GDDEPIKL_00617 2.72e-34 rpmI - - J ko:K02916 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L35
GDDEPIKL_00618 1.72e-157 infC - - J ko:K02520 - ko00000,ko03012,ko03029 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
GDDEPIKL_00619 7.74e-173 - 2.7.6.2 - H ko:K00949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 Thiamin pyrophosphokinase, vitamin B1 binding domain
GDDEPIKL_00620 1.23e-252 gap 1.2.1.12 - G ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
GDDEPIKL_00621 4.92e-115 ybaK - - J ko:K03976 - ko00000,ko01000,ko03016 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GDDEPIKL_00622 5.06e-234 ispH 1.17.7.4 - IM ko:K03527 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
GDDEPIKL_00623 1.41e-243 - 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Aldose 1-epimerase
GDDEPIKL_00624 1.64e-240 - 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Aldose 1-epimerase
GDDEPIKL_00625 3.96e-69 - - - - - - - -
GDDEPIKL_00626 1.11e-176 sigH - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
GDDEPIKL_00627 0.0 murE 6.3.2.13 - M ko:K01928 ko00300,ko00550,map00300,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GDDEPIKL_00628 7.89e-245 - - - V - - - Acetyltransferase (GNAT) domain
GDDEPIKL_00629 2.08e-89 - - - V - - - Acetyltransferase (GNAT) domain
GDDEPIKL_00630 0.0 smc - - D ko:K03529 - ko00000,ko03036 Required for chromosome condensation and partitioning
GDDEPIKL_00631 0.0 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Mur ligase middle domain
GDDEPIKL_00632 0.0 pepP 3.4.11.9 - E ko:K01262 - ko00000,ko01000,ko01002 Aminopeptidase P, N-terminal domain
GDDEPIKL_00633 5.29e-126 - - - F - - - NUDIX domain
GDDEPIKL_00634 8.7e-315 nagA 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Amidohydrolase family
GDDEPIKL_00635 1.15e-193 nagB 3.5.99.6 - G ko:K02564 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GDDEPIKL_00636 1.59e-266 - - - GK - - - ROK family
GDDEPIKL_00637 2e-211 - 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
GDDEPIKL_00638 1.31e-287 - 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
GDDEPIKL_00639 2.87e-217 - 2.7.1.4 - G ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 ko00000,ko00001,ko01000 pfkB family carbohydrate kinase
GDDEPIKL_00640 1.19e-123 - - - G - - - Major Facilitator Superfamily
GDDEPIKL_00641 1.87e-107 dtd - - J ko:K07560 - ko00000,ko01000,ko03016 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
GDDEPIKL_00643 8.3e-231 ftsQ - - D ko:K03589 ko04112,map04112 ko00000,ko00001,ko03036 Cell division protein FtsQ
GDDEPIKL_00644 0.0 murC 6.3.2.8 - M ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Belongs to the MurCDEF family
GDDEPIKL_00645 1.02e-277 murG 2.4.1.227, 6.3.2.8 GT28 M ko:K01924,ko:K02563 ko00471,ko00550,ko01100,ko01502,ko04112,map00471,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GDDEPIKL_00646 2.45e-288 ftsW 2.4.1.227 GT28 D ko:K02563,ko:K03588 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011,ko02000,ko03036 Belongs to the SEDS family
GDDEPIKL_00647 0.0 murD 6.3.2.9 - M ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
GDDEPIKL_00648 3.33e-265 mraY 2.7.8.13 - M ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GDDEPIKL_00649 0.0 murF 6.3.2.10 - M ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
GDDEPIKL_00650 2.6e-200 - - - M - - - Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GDDEPIKL_00651 0.0 ftsI 3.4.16.4 - M ko:K03587 ko00550,ko01501,map00550,map01501 ko00000,ko00001,ko01000,ko01011,ko03036 Penicillin-binding protein, transpeptidase domain protein
GDDEPIKL_00652 2.23e-91 - - - D - - - Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
GDDEPIKL_00653 2e-241 rsmH 2.1.1.199 - J ko:K03438 - ko00000,ko01000,ko03009 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
GDDEPIKL_00654 2.33e-120 mraZ - - K ko:K03925 - ko00000 Belongs to the MraZ family
GDDEPIKL_00655 0.0 - - - L - - - DNA helicase
GDDEPIKL_00656 4.79e-292 serA 1.1.1.399, 1.1.1.95 - EH ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
GDDEPIKL_00657 4.08e-101 nrdR - - K ko:K07738 - ko00000,ko03000 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
GDDEPIKL_00658 7.41e-70 - - - M - - - Lysin motif
GDDEPIKL_00659 3.03e-168 lexA 3.4.21.88 - K ko:K01356 - ko00000,ko00002,ko01000,ko01002,ko03400 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GDDEPIKL_00660 2.3e-206 czcD - - P ko:K16264 - ko00000,ko02000 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GDDEPIKL_00661 1.61e-225 ldh 1.1.1.27, 1.1.1.37 - C ko:K00016,ko:K00024 ko00010,ko00020,ko00270,ko00620,ko00630,ko00640,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04922,map00010,map00020,map00270,map00620,map00630,map00640,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200,map04922 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the LDH MDH superfamily. LDH family
GDDEPIKL_00662 0.0 hflX - - S ko:K03665 - ko00000,ko03009 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GDDEPIKL_00663 1.99e-159 rsmC 2.1.1.172 - J ko:K00564 - ko00000,ko01000,ko03009 Ribosomal protein L11 methyltransferase (PrmA)
GDDEPIKL_00664 0.0 hrpA 3.6.4.13 - L ko:K03578 - ko00000,ko01000 Helicase associated domain (HA2) Add an annotation
GDDEPIKL_00665 1.3e-281 - - - EGP ko:K18567,ko:K19577 - ko00000,ko02000 Major Facilitator Superfamily
GDDEPIKL_00666 0.0 glnA2 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 glutamine synthetase
GDDEPIKL_00667 0.0 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2252)
GDDEPIKL_00668 7.13e-169 hisA 5.3.1.16, 5.3.1.24 - E ko:K01814,ko:K01817 ko00340,ko00400,ko01100,ko01110,ko01130,ko01230,map00340,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Histidine biosynthesis protein
GDDEPIKL_00669 8.43e-155 hisH - - E ko:K02501 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
GDDEPIKL_00670 7.57e-163 - - - - - - - -
GDDEPIKL_00671 1.66e-144 hisB 3.1.3.15, 4.2.1.19 - E ko:K01089,ko:K01693 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Imidazoleglycerol-phosphate dehydratase
GDDEPIKL_00672 3.03e-277 hisC 2.6.1.9 - E ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
GDDEPIKL_00673 0.0 hisD 1.1.1.23 - E ko:K00013 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
GDDEPIKL_00674 1.7e-70 acyP 3.6.1.7 - C ko:K01512 ko00620,ko00627,ko01120,map00620,map00627,map01120 ko00000,ko00001,ko01000 Acylphosphatase
GDDEPIKL_00675 3.87e-199 - - - S - - - Aldo/keto reductase family
GDDEPIKL_00676 0.0 - 3.2.1.51 GH95 G ko:K15923 ko00511,map00511 ko00000,ko00001,ko01000 Glycosyl hydrolase family 65, N-terminal domain
GDDEPIKL_00677 2.86e-212 - 4.1.2.28 - EM ko:K22397 ko00040,map00040 ko00000,ko00001,ko01000 Dihydrodipicolinate synthetase family
GDDEPIKL_00678 5.06e-194 - - - S - - - Amidohydrolase
GDDEPIKL_00679 2.8e-186 - 1.1.1.100, 1.1.1.413 - IQ ko:K00059,ko:K18333,ko:K22322 ko00051,ko00061,ko00333,ko00780,ko01040,ko01100,ko01120,ko01130,ko01212,map00051,map00061,map00333,map00780,map01040,map01100,map01120,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 KR domain
GDDEPIKL_00680 9.86e-211 - 4.2.1.68 - M ko:K18334 ko00051,ko01120,map00051,map01120 ko00000,ko00001,ko01000 Enolase C-terminal domain-like
GDDEPIKL_00681 4.33e-189 istB - - L - - - IstB-like ATP binding protein
GDDEPIKL_00682 0.0 - - - L - - - PFAM Integrase catalytic
GDDEPIKL_00683 7.85e-190 - - - G ko:K02025 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_00686 7.99e-41 - - - S - - - Putative regulatory protein
GDDEPIKL_00687 8.33e-38 - - - L - - - Transposase and inactivated derivatives IS30 family
GDDEPIKL_00688 4.88e-261 - - - P ko:K02055 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDDEPIKL_00689 2.4e-201 - - - U ko:K02054 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_00690 2.92e-206 - - - U ko:K02053 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_00691 2.94e-261 - - - E ko:K02052 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
GDDEPIKL_00692 1.78e-204 - - - I - - - type I phosphodiesterase nucleotide pyrophosphatase
GDDEPIKL_00694 8.84e-12 istB - - L - - - IstB-like ATP binding protein
GDDEPIKL_00695 1.61e-73 istB - - L - - - IstB-like ATP binding protein
GDDEPIKL_00696 0.0 - - - L - - - PFAM Integrase catalytic
GDDEPIKL_00697 5.19e-222 - - - L - - - Domain of unknown function (DUF4862)
GDDEPIKL_00698 7.15e-232 - 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
GDDEPIKL_00699 1.2e-162 nanE 5.1.3.9 - G ko:K01788 ko00520,map00520 ko00000,ko00001,ko01000 Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
GDDEPIKL_00700 2.85e-204 - 3.5.1.106 - I ko:K15357 ko00760,ko01120,map00760,map01120 ko00000,ko00001,ko00002,ko01000 carboxylic ester hydrolase activity
GDDEPIKL_00701 0.0 oppA7 - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding proteins, family 5 Middle
GDDEPIKL_00702 2.11e-204 oppB6 - - EP ko:K02033 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_00703 0.0 oppCD2 - - EP ko:K02031,ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Oligopeptide/dipeptide transporter, C-terminal region
GDDEPIKL_00704 2.91e-189 oppF - - E ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ATPases associated with a variety of cellular activities
GDDEPIKL_00705 2.23e-232 nanA 4.1.3.3, 4.3.3.7 - EM ko:K01639,ko:K01714 ko00261,ko00300,ko00520,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map00520,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Dihydrodipicolinate synthetase family
GDDEPIKL_00706 3.69e-190 nagB 3.5.99.6 - G ko:K02564 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GDDEPIKL_00707 9.97e-18 nagA 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Amidohydrolase family
GDDEPIKL_00708 0.0 neu 3.2.1.18 GH33 G ko:K01186 ko00511,ko00600,ko04142,map00511,map00600,map04142 ko00000,ko00001,ko01000,ko02042 BNR repeat-like domain
GDDEPIKL_00709 1.32e-306 - - - P ko:K07133 - ko00000 Domain of unknown function (DUF4143)
GDDEPIKL_00710 6.61e-195 - - - K - - - FCD
GDDEPIKL_00711 0.0 - - - S - - - Calcineurin-like phosphoesterase
GDDEPIKL_00712 0.0 leuA 2.3.3.13 - E ko:K01649 ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
GDDEPIKL_00713 0.0 pbp5 - - M - - - Transglycosylase
GDDEPIKL_00714 4.93e-222 - - - I - - - PAP2 superfamily
GDDEPIKL_00715 0.0 topA 5.99.1.2 - L ko:K03168 - ko00000,ko01000,ko03032,ko03400 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GDDEPIKL_00716 5.84e-150 tmk 2.7.4.9 - F ko:K00943 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
GDDEPIKL_00717 2.63e-265 holB 2.7.7.7 - L ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
GDDEPIKL_00718 1.5e-136 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
GDDEPIKL_00719 1.47e-50 hpr - - G ko:K11189 - ko00000,ko02000 PTS HPr component phosphorylation site
GDDEPIKL_00721 0.0 ptsI 2.7.3.9 - G ko:K08483 ko02060,map02060 ko00000,ko00001,ko01000,ko02000 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GDDEPIKL_00724 1.52e-137 - - - S ko:K06910 - ko00000 Phosphatidylethanolamine-binding protein
GDDEPIKL_00725 0.0 pepD - - E ko:K08659 - ko00000,ko01000,ko01002 Peptidase family C69
GDDEPIKL_00726 0.0 fhs 6.3.4.3 - F ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Formate-tetrahydrofolate ligase
GDDEPIKL_00727 9.13e-81 - - - S - - - Macrophage migration inhibitory factor (MIF)
GDDEPIKL_00728 1.29e-124 - - - S - - - GtrA-like protein
GDDEPIKL_00729 0.0 - - - EGP - - - Major Facilitator Superfamily
GDDEPIKL_00730 2.06e-157 - - - G - - - Phosphoglycerate mutase family
GDDEPIKL_00731 1.73e-205 - - - - - - - -
GDDEPIKL_00732 2.47e-296 - 3.1.1.31 - G ko:K07404 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Lactonase, 7-bladed beta-propeller
GDDEPIKL_00733 1.03e-240 - - - S - - - Protein of unknown function (DUF805)
GDDEPIKL_00735 0.0 gltX 6.1.1.17 - J ko:K01885 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GDDEPIKL_00738 8.81e-103 - - - - - - - -
GDDEPIKL_00739 5.06e-178 - - - S - - - Protein of unknown function (DUF1275)
GDDEPIKL_00740 8.36e-72 - - - K - - - HxlR-like helix-turn-helix
GDDEPIKL_00741 5.28e-105 - - - S ko:K07118 - ko00000 NAD(P)H-binding
GDDEPIKL_00742 0.0 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
GDDEPIKL_00743 0.0 - - - EGP - - - Major Facilitator Superfamily
GDDEPIKL_00744 0.0 - - - IQ - - - [acyl-carrier-protein] S-malonyltransferase activity
GDDEPIKL_00745 0.0 - - - H - - - Beta-ketoacyl synthase, C-terminal domain
GDDEPIKL_00746 2.15e-146 - - - K - - - WHG domain
GDDEPIKL_00747 2.04e-142 - - - Q - - - 4'-phosphopantetheinyl transferase superfamily
GDDEPIKL_00748 9.94e-142 recR - - L ko:K06187 ko03440,map03440 ko00000,ko00001,ko03400 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
GDDEPIKL_00749 0.0 dnaX 2.7.7.7 - L ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III subunit gamma tau
GDDEPIKL_00750 1.98e-127 - - - K - - - Bacterial regulatory proteins, tetR family
GDDEPIKL_00751 2.3e-276 - 2.7.1.107 - I ko:K07029 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko01000 Diacylglycerol kinase catalytic domain protein
GDDEPIKL_00752 1.74e-69 - - - S - - - TIGRFAM helicase secretion neighborhood TadE-like protein
GDDEPIKL_00753 5.04e-76 - - - U - - - TadE-like protein
GDDEPIKL_00754 3.68e-55 - - - S - - - Protein of unknown function (DUF4244)
GDDEPIKL_00755 6.89e-151 - - - NU - - - Type II secretion system (T2SS), protein F
GDDEPIKL_00756 7.27e-95 - - - U ko:K12510 - ko00000,ko02044 Type ii secretion system
GDDEPIKL_00757 1.31e-245 cpaF - - U ko:K02283 - ko00000,ko02035,ko02044 Type II IV secretion system protein
GDDEPIKL_00758 6.43e-160 - - - D - - - bacterial-type flagellum organization
GDDEPIKL_00759 9.04e-172 dedA1 - - S ko:K03975 - ko00000 SNARE associated Golgi protein
GDDEPIKL_00760 3.86e-164 - - - S - - - HAD hydrolase, family IA, variant 3
GDDEPIKL_00761 7.9e-182 - 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Oxidoreductase, short chain dehydrogenase reductase family protein
GDDEPIKL_00762 7.79e-142 - - - C - - - Acyl-CoA reductase (LuxC)
GDDEPIKL_00763 5.43e-21 - - - F - - - Psort location CytoplasmicMembrane, score 10.00
GDDEPIKL_00764 5.76e-134 hspR - - K ko:K13640 - ko00000,ko03000 transcriptional regulator, MerR family
GDDEPIKL_00765 2.45e-224 dnaJ - - O ko:K03686,ko:K05516 - ko00000,ko03029,ko03036,ko03110 DnaJ molecular chaperone homology domain
GDDEPIKL_00766 5.28e-116 grpE - - O ko:K03687 - ko00000,ko03029,ko03110 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
GDDEPIKL_00767 0.0 dnaK - - O ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Heat shock 70 kDa protein
GDDEPIKL_00768 0.0 - 3.2.1.1, 3.2.1.41 CBM48,GH13 M ko:K01176,ko:K01200 ko00500,ko01100,ko01110,ko04973,map00500,map01100,map01110,map04973 ko00000,ko00001,ko01000 Aamy_C
GDDEPIKL_00769 1.37e-248 - - - K - - - Psort location Cytoplasmic, score
GDDEPIKL_00770 8.38e-190 traX - - S - - - TraX protein
GDDEPIKL_00771 9.93e-213 malG - - G ko:K15772 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_00772 0.0 malC - - G ko:K15771 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_00773 2.41e-299 malE - - G ko:K15770 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDDEPIKL_00774 0.0 malL 2.4.1.4, 3.2.1.1, 3.2.1.20, 5.4.99.16 GH13,GH31 G ko:K01187,ko:K05341,ko:K05343 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha-amylase domain
GDDEPIKL_00775 0.0 malQ 2.4.1.25 GH77 G ko:K00705 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 4-alpha-glucanotransferase
GDDEPIKL_00776 5.58e-221 - 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
GDDEPIKL_00777 0.0 - - - M - - - domain protein
GDDEPIKL_00778 0.0 - - - M - - - cell wall anchor domain protein
GDDEPIKL_00779 2.24e-239 - - - K - - - Psort location Cytoplasmic, score
GDDEPIKL_00780 0.0 - 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha-amylase domain
GDDEPIKL_00781 2.92e-259 ilvC 1.1.1.86 - H ko:K00053 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
GDDEPIKL_00782 7.18e-260 ilvC 1.1.1.86 - H ko:K00053 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
GDDEPIKL_00783 0.0 - - - EGP - - - Sugar (and other) transporter
GDDEPIKL_00784 1.03e-243 - - - K ko:K03484 - ko00000,ko03000 helix_turn _helix lactose operon repressor
GDDEPIKL_00785 0.0 scrT - - G - - - Transporter major facilitator family protein
GDDEPIKL_00786 0.0 gtfA 2.4.1.7 GH13 G ko:K00690 ko00500,map00500 ko00000,ko00001,ko01000 Domain of unknown function (DUF1964)
GDDEPIKL_00788 2.31e-255 - - - K ko:K03484 - ko00000,ko03000 helix_turn _helix lactose operon repressor
GDDEPIKL_00789 1.8e-81 crcB - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GDDEPIKL_00790 3.82e-209 crcB - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GDDEPIKL_00791 0.0 - - - P ko:K03281 - ko00000 Voltage gated chloride channel
GDDEPIKL_00792 0.0 purA 6.3.4.4 - F ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
GDDEPIKL_00793 6.59e-254 fbaA 4.1.2.13 - G ko:K01624 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Fructose-bisphosphate aldolase class-II
GDDEPIKL_00794 1.55e-223 - - - EG - - - EamA-like transporter family
GDDEPIKL_00796 6.72e-218 htpX - - O ko:K03799 - ko00000,ko00002,ko01000,ko01002 Belongs to the peptidase M48B family
GDDEPIKL_00797 0.0 fprA 1.18.1.2, 1.19.1.1 - C ko:K00528 - ko00000,ko01000 Pyridine nucleotide-disulphide oxidoreductase
GDDEPIKL_00798 0.0 - 3.6.3.4, 3.6.3.54 - P ko:K01533,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 E1-E2 ATPase
GDDEPIKL_00799 0.0 degP - - O ko:K08372 ko02020,map02020 ko00000,ko00001,ko01000,ko01002 Domain present in PSD-95, Dlg, and ZO-1/2.
GDDEPIKL_00800 0.0 tgt 2.4.2.29 - F ko:K00773 - ko00000,ko01000,ko03016 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
GDDEPIKL_00802 1.49e-192 - - - S ko:K11068 - ko00000,ko02042 Haemolysin-III related
GDDEPIKL_00803 1.01e-68 - - - S - - - Putative heavy-metal-binding
GDDEPIKL_00804 9.5e-98 mutT 3.6.1.55 - L ko:K03574 - ko00000,ko01000,ko03400 NUDIX domain
GDDEPIKL_00805 0.0 - - - KL - - - Domain of unknown function (DUF3427)
GDDEPIKL_00806 2.82e-210 - - - M - - - Glycosyltransferase like family 2
GDDEPIKL_00807 7.68e-252 - - - S - - - Fic/DOC family
GDDEPIKL_00808 7.13e-169 - - - S ko:K07005 - ko00000 Pyridoxamine 5'-phosphate oxidase
GDDEPIKL_00809 1.82e-256 msrA 1.8.4.11, 1.8.4.12 - O ko:K07304,ko:K12267 - ko00000,ko01000 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GDDEPIKL_00810 0.0 lysX - - S - - - Uncharacterised conserved protein (DUF2156)
GDDEPIKL_00811 0.0 - - - S - - - Putative esterase
GDDEPIKL_00812 4.51e-36 - - - - - - - -
GDDEPIKL_00813 2.2e-226 - - - EG - - - EamA-like transporter family
GDDEPIKL_00814 1.79e-112 - - - O - - - Hsp20/alpha crystallin family
GDDEPIKL_00815 1.86e-271 pldB 3.1.1.5 - I ko:K01048 ko00564,map00564 ko00000,ko00001,ko01000 Serine aminopeptidase, S33
GDDEPIKL_00816 0.0 pepX 3.4.14.5 - E ko:K01278 ko04974,map04974 ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 Dipeptidyl peptidase IV (DPP IV) N-terminal region
GDDEPIKL_00817 8.7e-166 fhaA - - T - - - Protein of unknown function (DUF2662)
GDDEPIKL_00818 2.56e-104 fhaB - - T - - - Inner membrane component of T3SS, cytoplasmic domain
GDDEPIKL_00819 0.0 pstP 3.1.3.16 - T ko:K20074 - ko00000,ko01000,ko01009 Sigma factor PP2C-like phosphatases
GDDEPIKL_00820 0.0 rodA - - D ko:K03588 ko04112,map04112 ko00000,ko00001,ko02000,ko03036 Belongs to the SEDS family
GDDEPIKL_00821 0.0 pbpA - - M ko:K05364 ko00550,map00550 ko00000,ko00001,ko01011 penicillin-binding protein
GDDEPIKL_00822 5.61e-224 pknA 2.7.11.1 - T ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 Protein tyrosine kinase
GDDEPIKL_00823 0.0 pknB 2.7.11.1 - KLT ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 Protein tyrosine kinase
GDDEPIKL_00824 7.81e-155 trpG 2.6.1.85, 4.1.3.27 - EH ko:K01658,ko:K01664 ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 para-aminobenzoate synthase glutamine amidotransferase component II
GDDEPIKL_00825 9.28e-291 srtB 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
GDDEPIKL_00826 1.56e-162 - - - S - - - Bacterial protein of unknown function (DUF881)
GDDEPIKL_00827 2.41e-101 crgA - - D - - - Involved in cell division
GDDEPIKL_00828 5.93e-179 gluP 3.4.21.105 - S ko:K19225 - ko00000,ko01000,ko01002 Rhomboid family
GDDEPIKL_00829 1.46e-47 - - - - - - - -
GDDEPIKL_00830 0.0 glgP 2.4.1.1 GT35 G ko:K00688 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 ko00000,ko00001,ko01000 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
GDDEPIKL_00831 1.75e-93 - - - I - - - Sterol carrier protein
GDDEPIKL_00832 6.16e-289 - - - EGP - - - Major Facilitator Superfamily
GDDEPIKL_00833 2.26e-266 - - - T - - - Histidine kinase
GDDEPIKL_00834 2.66e-146 - - - K - - - COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
GDDEPIKL_00835 1.79e-61 - - - S - - - Protein of unknown function (DUF3073)
GDDEPIKL_00836 5.93e-261 trpS 6.1.1.2 - J ko:K01867 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
GDDEPIKL_00837 0.0 - - - S - - - Amidohydrolase family
GDDEPIKL_00838 3.07e-239 - - - S - - - Protein conserved in bacteria
GDDEPIKL_00839 0.0 - - - E ko:K11928 - ko00000,ko02000 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GDDEPIKL_00840 0.0 - - - S - - - Threonine/Serine exporter, ThrE
GDDEPIKL_00841 0.0 ppc 4.1.1.31 - H ko:K01595 ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
GDDEPIKL_00842 0.0 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
GDDEPIKL_00843 4.29e-160 - - - S ko:K07133 - ko00000 AAA domain
GDDEPIKL_00844 0.0 - 3.1.4.52 - T ko:K14051 ko02024,ko02026,map02024,map02026 ko00000,ko00001,ko01000 Putative diguanylate phosphodiesterase
GDDEPIKL_00845 2.97e-143 - - - S - - - Domain of unknown function (DUF4956)
GDDEPIKL_00846 1.16e-200 - - - P - - - VTC domain
GDDEPIKL_00847 0.0 - - - M ko:K06330 - ko00000 CotH kinase protein
GDDEPIKL_00848 0.0 - - - S ko:K21012 ko02025,map02025 ko00000,ko00001 Putative exopolysaccharide Exporter (EPS-E)
GDDEPIKL_00849 0.0 - - GT4 M ko:K21011 ko02025,map02025 ko00000,ko00001,ko01003 Domain of unknown function (DUF3492)
GDDEPIKL_00850 1.94e-264 - - - S - - - Uncharacterised protein conserved in bacteria (DUF2194)
GDDEPIKL_00851 5.57e-127 - - - S - - - Uncharacterised protein conserved in bacteria (DUF2194)
GDDEPIKL_00852 5.5e-209 - - - - - - - -
GDDEPIKL_00853 0.0 - 5.1.3.2 - GM ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 ADP-glyceromanno-heptose 6-epimerase activity
GDDEPIKL_00854 0.0 - 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Thioredoxin domain
GDDEPIKL_00855 1.68e-138 ahpC 1.11.1.15 - O ko:K03386 ko04214,map04214 ko00000,ko00001,ko01000,ko04147 C-terminal domain of 1-Cys peroxiredoxin
GDDEPIKL_00856 3.52e-153 cah 4.2.1.1 - P ko:K01673 ko00910,map00910 ko00000,ko00001,ko01000 Reversible hydration of carbon dioxide
GDDEPIKL_00857 8.47e-264 - - - S - - - AAA ATPase domain
GDDEPIKL_00858 9.82e-298 - - - P ko:K03699 - ko00000,ko02042 Transporter associated domain
GDDEPIKL_00859 2.21e-109 dps - - P ko:K04047 - ko00000,ko03036 Belongs to the Dps family
GDDEPIKL_00860 0.0 - - - G ko:K10117 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDDEPIKL_00861 5.95e-240 - - - K ko:K05499 - ko00000,ko03000 Periplasmic binding protein-like domain
GDDEPIKL_00862 0.0 amyE - - G ko:K10117 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDDEPIKL_00863 5.07e-293 - - - M - - - Protein of unknown function (DUF2961)
GDDEPIKL_00865 4.38e-147 amyE - - G ko:K10117 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDDEPIKL_00866 1.28e-95 amyE - - G ko:K10117 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDDEPIKL_00867 1.1e-91 - - - K - - - Psort location Cytoplasmic, score
GDDEPIKL_00868 2.79e-38 - - - K - - - Psort location Cytoplasmic, score
GDDEPIKL_00869 1.1e-198 msmF - - G ko:K10118 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_00870 3.16e-195 - - - G ko:K02026,ko:K10119 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
GDDEPIKL_00871 7.96e-93 - 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha-amylase domain
GDDEPIKL_00872 8.25e-63 - 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha-amylase domain
GDDEPIKL_00873 2.65e-185 - 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha-amylase domain
GDDEPIKL_00874 3.78e-271 - - - L - - - Transposase and inactivated derivatives IS30 family
GDDEPIKL_00875 2.43e-240 - - - K - - - Psort location Cytoplasmic, score
GDDEPIKL_00876 0.0 - - - G - - - Belongs to the glycosyl hydrolase 31 family
GDDEPIKL_00877 0.0 amyE - - G ko:K10117 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDDEPIKL_00878 0.0 - 3.2.1.26 GH32 G ko:K01193 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Glycosyl hydrolases family 32
GDDEPIKL_00879 3.26e-253 - - - K ko:K02529 - ko00000,ko03000 Periplasmic binding protein domain
GDDEPIKL_00880 3.39e-148 - - - S - - - Protein of unknown function, DUF624
GDDEPIKL_00881 9.48e-111 amyE - - G ko:K10117 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDDEPIKL_00882 6.35e-147 - - - L - - - Transposase and inactivated derivatives IS30 family
GDDEPIKL_00883 5.42e-110 dps - - P ko:K04047 - ko00000,ko03036 Belongs to the Dps family
GDDEPIKL_00884 0.0 - - - S ko:K07133 - ko00000 Domain of unknown function (DUF4143)
GDDEPIKL_00886 2.54e-159 - - - S ko:K07043 - ko00000 Protein of unknown function DUF45
GDDEPIKL_00889 3.64e-252 - - - S - - - Psort location CytoplasmicMembrane, score
GDDEPIKL_00890 0.0 gdhA 1.4.1.4 - E ko:K00262 ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100 ko00000,ko00001,ko01000 Belongs to the Glu Leu Phe Val dehydrogenases family
GDDEPIKL_00891 2.03e-262 - - - V - - - VanZ like family
GDDEPIKL_00892 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
GDDEPIKL_00894 7.16e-233 - - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator, LacI family
GDDEPIKL_00895 6.05e-89 - - - S - - - Transmembrane domain of unknown function (DUF3566)
GDDEPIKL_00896 0.0 gyrA 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GDDEPIKL_00897 0.0 gyrB 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GDDEPIKL_00898 3.41e-107 - - - S - - - Protein of unknown function (DUF721)
GDDEPIKL_00899 3.75e-255 recF - - L ko:K03629 ko03440,map03440 ko00000,ko00001,ko03400 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
GDDEPIKL_00900 5.94e-262 dnaN 2.7.7.7 - L ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
GDDEPIKL_00901 0.0 dnaA - - L ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GDDEPIKL_00902 4.62e-20 rpmH - - J ko:K02914 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL34 family
GDDEPIKL_00903 2.15e-75 rnpA 3.1.26.5 - J ko:K03536 - ko00000,ko01000,ko03016 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
GDDEPIKL_00904 2.16e-238 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Membrane protein insertase, YidC Oxa1 family
GDDEPIKL_00905 8.02e-119 jag - - S ko:K06346 - ko00000 Putative single-stranded nucleic acids-binding domain
GDDEPIKL_00906 4.33e-160 rsmG 2.1.1.170 - J ko:K03501 - ko00000,ko01000,ko03009,ko03036 Specifically methylates the N7 position of a guanine in 16S rRNA
GDDEPIKL_00907 5.17e-223 parA - - D ko:K03496 - ko00000,ko03036,ko04812 CobQ CobB MinD ParA nucleotide binding domain protein
GDDEPIKL_00908 9.54e-285 parB - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
GDDEPIKL_00909 5.17e-227 trxB 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
GDDEPIKL_00910 0.0 mviN - - KLT ko:K03980 - ko00000,ko01011,ko02000 MviN-like protein
GDDEPIKL_00911 0.0 - - - - - - - -
GDDEPIKL_00912 7.29e-219 mutT4 - - L - - - Belongs to the Nudix hydrolase family
GDDEPIKL_00913 0.0 pcnA 2.7.7.19, 2.7.7.72 - J ko:K00970,ko:K00974 ko03013,ko03018,map03013,map03018 ko00000,ko00001,ko01000,ko03016,ko03019 Probable RNA and SrmB- binding site of polymerase A
GDDEPIKL_00914 3.57e-144 - - - S - - - LytR cell envelope-related transcriptional attenuator
GDDEPIKL_00915 1.33e-226 ispE 2.7.1.148 - F ko:K00919 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
GDDEPIKL_00916 1.86e-214 ksgA 2.1.1.182 - J ko:K02528 - ko00000,ko01000,ko03009 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
GDDEPIKL_00917 4.63e-284 rpfB - - S ko:K21688 - ko00000 G5
GDDEPIKL_00919 1.08e-182 - - - O - - - Thioredoxin
GDDEPIKL_00920 0.0 - - - KLT - - - Protein tyrosine kinase
GDDEPIKL_00921 0.0 - 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Fibronectin type III-like domain
GDDEPIKL_00922 4.03e-43 - - - T - - - LytTr DNA-binding domain
GDDEPIKL_00923 3.63e-35 - - - T - - - LytTr DNA-binding domain
GDDEPIKL_00924 6.15e-153 - - - K - - - Helix-turn-helix XRE-family like proteins
GDDEPIKL_00925 0.0 - 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Glycosyl hydrolase family 3 N-terminal domain protein
GDDEPIKL_00926 3.06e-158 - - - S - - - Psort location CytoplasmicMembrane, score
GDDEPIKL_00927 4.65e-57 nrdH - - O ko:K06191 - ko00000 Glutaredoxin
GDDEPIKL_00928 1.72e-114 nrdI - - F ko:K03647 - ko00000 Probably involved in ribonucleotide reductase function
GDDEPIKL_00929 0.0 nrdE 1.17.4.1 - F ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GDDEPIKL_00931 1.26e-243 nrdF 1.17.4.1 - F ko:K00526 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GDDEPIKL_00932 1.91e-280 - - - M - - - Glycosyltransferase like family 2
GDDEPIKL_00933 1.66e-95 - 2.7.1.194 - G ko:K02821 ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GDDEPIKL_00934 2.09e-60 - 2.7.1.194 - G ko:K02822 ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
GDDEPIKL_00935 3.12e-307 - - - S ko:K03475 ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko02000 PTS system sugar-specific permease component
GDDEPIKL_00936 2.91e-175 - - - K ko:K03710 - ko00000,ko03000 UTRA domain
GDDEPIKL_00937 7.62e-270 ugpC - - E ko:K10112 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
GDDEPIKL_00938 4.11e-68 - - - S - - - LPXTG-motif cell wall anchor domain protein
GDDEPIKL_00939 2.72e-182 - - - L - - - Winged helix-turn helix
GDDEPIKL_00940 3.33e-232 - - - - - - - -
GDDEPIKL_00941 6.14e-191 - - - U ko:K10439,ko:K10440 ko02010,ko02030,map02010,map02030 ko00000,ko00001,ko00002,ko02000 Branched-chain amino acid transport system / permease component
GDDEPIKL_00942 4.51e-222 rbsA 3.6.3.17 - G ko:K10441,ko:K10542,ko:K17215 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
GDDEPIKL_00943 6.91e-187 rbsB - - G ko:K10439 ko02010,ko02030,map02010,map02030 ko00000,ko00001,ko00002,ko02000 Periplasmic binding protein domain
GDDEPIKL_00944 7.94e-167 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
GDDEPIKL_00945 7.31e-22 tnp3521a2 - - L - - - Integrase core domain
GDDEPIKL_00946 7.78e-200 - - - - - - - -
GDDEPIKL_00947 0.0 - - - KLT - - - Domain of unknown function (DUF4032)
GDDEPIKL_00948 0.0 galT 2.7.7.12 - G ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 ko00000,ko00001,ko00002,ko01000 UDP-glucose--hexose-1-phosphate uridylyltransferase
GDDEPIKL_00949 6.27e-215 - 5.1.3.15 - G ko:K01792 ko00010,ko01100,ko01110,ko01120,ko01130,map00010,map01100,map01110,map01120,map01130 ko00000,ko00001,ko01000 Aldose 1-epimerase
GDDEPIKL_00950 2.26e-222 rlmB 2.1.1.185 - J ko:K03218 - ko00000,ko01000,ko03009 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GDDEPIKL_00951 2.78e-273 - - - EGP - - - Transmembrane secretion effector
GDDEPIKL_00952 2.05e-314 nagE 2.7.1.193 - G ko:K02802,ko:K02803,ko:K02804 ko00520,ko02060,map00520,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system, EIIB
GDDEPIKL_00953 1.58e-112 - 2.7.1.208 - G ko:K02777,ko:K20107,ko:K20108 ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111 ko00000,ko00001,ko00002,ko01000,ko02000 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GDDEPIKL_00954 1.55e-20 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
GDDEPIKL_00955 0.0 pacL2 3.6.3.8 - P ko:K01537 - ko00000,ko01000 Cation transporter/ATPase, N-terminus
GDDEPIKL_00956 2.83e-133 - - - - - - - -
GDDEPIKL_00957 8.25e-142 dcd 3.5.4.13 - F ko:K01494 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dCTP deaminase family
GDDEPIKL_00958 7.72e-197 - - - - - - - -
GDDEPIKL_00959 1.46e-187 - - - S ko:K06999 - ko00000 Phospholipase/Carboxylesterase
GDDEPIKL_00960 5.53e-163 - - - S ko:K07090 - ko00000 membrane transporter protein
GDDEPIKL_00961 0.0 nhaP - - P ko:K03316 - ko00000 Sodium/hydrogen exchanger family
GDDEPIKL_00962 1.08e-105 tadA 3.5.4.1, 3.5.4.33 - FJ ko:K01485,ko:K11991 ko00240,ko00330,ko01100,map00240,map00330,map01100 ko00000,ko00001,ko01000,ko03016 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
GDDEPIKL_00963 0.0 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 Glycosyl hydrolase family 36 N-terminal domain
GDDEPIKL_00964 9.36e-296 - - - GK - - - ROK family
GDDEPIKL_00965 1.62e-312 - - - G ko:K10117 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDDEPIKL_00966 3.84e-208 - - - G ko:K10118 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_00967 3.04e-198 - - - G ko:K10119 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_00968 0.0 - 3.2.1.10 GH13 G ko:K01182 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain protein
GDDEPIKL_00969 1.91e-294 ilvA 4.3.1.19 - E ko:K01754 ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Pyridoxal-phosphate dependent enzyme
GDDEPIKL_00970 7.18e-183 cobB2 - - K ko:K12410 - ko00000,ko01000 Sir2 family
GDDEPIKL_00971 1.67e-30 - - - L - - - PFAM Integrase catalytic
GDDEPIKL_00972 9.72e-20 - - - L - - - PFAM Integrase catalytic
GDDEPIKL_00973 0.0 - 4.2.1.53 - S ko:K10254 - ko00000,ko01000 MCRA family
GDDEPIKL_00974 8.89e-214 dkgV - - C - - - Aldo/keto reductase family
GDDEPIKL_00976 0.0 dnaE 2.7.7.7 - L ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III alpha subunit
GDDEPIKL_00977 6.11e-256 - - - K - - - WYL domain
GDDEPIKL_00978 4.29e-227 rluD 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
GDDEPIKL_00979 1.72e-116 lspA 3.4.23.36 - MU ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 This protein specifically catalyzes the removal of signal peptides from prolipoproteins
GDDEPIKL_00980 1.2e-89 - - - V - - - DivIVA protein
GDDEPIKL_00981 3.44e-60 - - - S ko:K02221 - ko00000,ko02044 YGGT family
GDDEPIKL_00982 7.01e-92 sepF - - D ko:K09772 - ko00000,ko03036 Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
GDDEPIKL_00983 8.65e-275 ftsZ - - D ko:K03531 ko04112,map04112 ko00000,ko00001,ko02048,ko03036,ko04812 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
GDDEPIKL_00984 0.0 dus - - J - - - Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GDDEPIKL_00985 0.0 glyQS 6.1.1.14 - J ko:K01880 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of glycine to tRNA(Gly)
GDDEPIKL_00986 4.54e-197 thiM 2.7.1.50 - H ko:K00878 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
GDDEPIKL_00987 0.0 thiC 4.1.99.17 - H ko:K03147 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
GDDEPIKL_00988 2.76e-290 - - - O ko:K13525 ko04141,ko05134,map04141,map05134 ko00000,ko00001,ko00002,ko03019,ko04131,ko04147 AAA domain (Cdc48 subfamily)
GDDEPIKL_00989 6.39e-189 thiD 2.7.1.49, 2.7.4.7 - H ko:K00941 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Phosphomethylpyrimidine kinase
GDDEPIKL_00990 1.64e-81 - - - S - - - Thiamine-binding protein
GDDEPIKL_00991 0.0 - - - G ko:K08369 - ko00000,ko02000 Sugar (and other) transporter
GDDEPIKL_00992 6.21e-292 - - - T - - - Histidine kinase
GDDEPIKL_00993 8.31e-158 - - - K - - - helix_turn_helix, Lux Regulon
GDDEPIKL_00994 8.19e-244 - - - - - - - -
GDDEPIKL_00995 0.0 - - - O ko:K13963 ko05146,map05146 ko00000,ko00001 SERine Proteinase INhibitors
GDDEPIKL_00996 4.97e-249 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
GDDEPIKL_00997 1.8e-306 lacY - - P ko:K02532 - ko00000,ko02000 LacY proton/sugar symporter
GDDEPIKL_00998 0.0 fosC 3.2.1.26 GH32 G ko:K01193 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 32 family
GDDEPIKL_00999 6.61e-181 ppgK 2.7.1.2, 2.7.1.63 - GK ko:K00845,ko:K00886 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
GDDEPIKL_01000 8.77e-193 - - - C - - - Putative TM nitroreductase
GDDEPIKL_01001 1.55e-252 - - - S - - - Glycosyltransferase, group 2 family protein
GDDEPIKL_01002 4.04e-134 - - - U - - - Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
GDDEPIKL_01003 0.0 - - - GP ko:K16785,ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
GDDEPIKL_01004 4.67e-63 - - - J ko:K07574 - ko00000,ko03009 CRS1_YhbY
GDDEPIKL_01005 1e-71 - - - S ko:K08972 - ko00000 Mycobacterial 4 TMS phage holin, superfamily IV
GDDEPIKL_01006 1.59e-67 - - - - - - - -
GDDEPIKL_01007 4.03e-239 - - - EH - - - D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
GDDEPIKL_01008 0.0 - - - EGP - - - Major Facilitator Superfamily
GDDEPIKL_01009 6.11e-25 mtrB 2.7.13.3 - T ko:K07636,ko:K07654 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
GDDEPIKL_01011 0.0 rarA - - L ko:K07478 - ko00000 Recombination factor protein RarA
GDDEPIKL_01012 0.0 - - - L - - - DEAD DEAH box helicase
GDDEPIKL_01013 2.54e-255 - - - S - - - Polyphosphate kinase 2 (PPK2)
GDDEPIKL_01015 0.0 - - - EK ko:K05825,ko:K18907 ko00300,ko01100,ko01130,ko01210,map00300,map01100,map01130,map01210 ko00000,ko00001,ko00002,ko01000,ko01504,ko03000 Alanine-glyoxylate amino-transferase
GDDEPIKL_01016 1.88e-144 - - - S ko:K06895 - ko00000,ko02000 LysE type translocator
GDDEPIKL_01017 0.0 - - - I - - - PAP2 superfamily
GDDEPIKL_01018 1.27e-252 gluD - - E ko:K10007 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_01019 8.52e-144 gluC - - E ko:K10006 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_01020 3.16e-189 gluB - - ET ko:K10005 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the bacterial solute-binding protein 3 family
GDDEPIKL_01021 7.77e-197 gluA - - E ko:K10008 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding protein of ABC transporter for glutamate K02028
GDDEPIKL_01022 3.02e-130 - - - S - - - Aminoacyl-tRNA editing domain
GDDEPIKL_01023 0.0 aspS 6.1.1.12 - J ko:K01876 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
GDDEPIKL_01024 0.0 hisS 6.1.1.21 - J ko:K01892 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Histidyl-tRNA synthetase
GDDEPIKL_01025 8.64e-317 - - - S - - - Domain of Unknown Function (DUF349)
GDDEPIKL_01026 0.0 - 3.1.3.5 - F ko:K01081 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 5'-nucleotidase, C-terminal domain
GDDEPIKL_01027 2.35e-67 - - - I - - - Hydrolase, alpha beta domain protein
GDDEPIKL_01028 1.63e-177 gtr - - U ko:K08139 ko04113,map04113 ko00000,ko00001,ko02000 Sugar (and other) transporter
GDDEPIKL_01029 2.13e-15 - - - K - - - AraC-like ligand binding domain
GDDEPIKL_01030 0.0 clpC - - O ko:K03696 ko01100,map01100 ko00000,ko03110 ATPase family associated with various cellular activities (AAA)
GDDEPIKL_01031 3.99e-231 uspA - - T - - - Belongs to the universal stress protein A family
GDDEPIKL_01032 4.74e-244 - - - S - - - Protein of unknown function (DUF3027)
GDDEPIKL_01033 5.87e-86 cspB - - K ko:K03704 - ko00000,ko03000 'Cold-shock' DNA-binding domain
GDDEPIKL_01034 0.0 phoR 2.7.13.3 - T ko:K02484 - ko00000,ko01000,ko01001,ko02022 ATPase histidine kinase DNA gyrase B HSP90 domain protein
GDDEPIKL_01035 1.23e-170 phoP - - KT ko:K02483 - ko00000,ko02022 Response regulator receiver domain protein
GDDEPIKL_01036 2.67e-148 - - - - - - - -
GDDEPIKL_01037 6.57e-54 - - - S - - - Proteins of 100 residues with WXG
GDDEPIKL_01038 0.0 groL - - O ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
GDDEPIKL_01039 1.54e-51 cspA - - K ko:K03704 - ko00000,ko03000 'Cold-shock' DNA-binding domain
GDDEPIKL_01040 1.18e-126 - - - S - - - LytR cell envelope-related transcriptional attenuator
GDDEPIKL_01041 1.4e-169 ung 3.2.2.27 - L ko:K03648 ko03410,ko05340,map03410,map05340 ko00000,ko00001,ko01000,ko03400 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
GDDEPIKL_01042 1.53e-245 moxR - - S ko:K03924 - ko00000,ko01000 ATPase family associated with various cellular activities (AAA)
GDDEPIKL_01043 1.62e-209 - - - S - - - Protein of unknown function DUF58
GDDEPIKL_01044 3.26e-119 - - - - - - - -
GDDEPIKL_01045 5.53e-242 - - - S ko:K07114 - ko00000,ko02000 von Willebrand factor (vWF) type A domain
GDDEPIKL_01046 1.27e-214 - - - S ko:K07114 - ko00000,ko02000 von Willebrand factor (vWF) type A domain
GDDEPIKL_01047 8.64e-76 - - - - - - - -
GDDEPIKL_01048 0.0 - - - S - - - PGAP1-like protein
GDDEPIKL_01049 3.68e-144 - - - S ko:K16925 - ko00000,ko00002,ko02000 ABC-type cobalt transport system, permease component
GDDEPIKL_01050 0.0 purB 4.3.2.2 - F ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Adenylosuccinate lyase C-terminal
GDDEPIKL_01051 0.0 - - - S - - - Lysylphosphatidylglycerol synthase TM region
GDDEPIKL_01052 3.31e-57 hup - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Belongs to the bacterial histone-like protein family
GDDEPIKL_01053 0.0 pafA 6.3.1.19 - O ko:K13571 - ko00000,ko00002,ko01000,ko03051 Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
GDDEPIKL_01054 8.43e-16 pup - - S ko:K13570 - ko00000,ko04121 Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation
GDDEPIKL_01055 4.8e-224 - 3.1.3.25 - G ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 ko00000,ko00001,ko00002,ko01000 Inositol monophosphatase family
GDDEPIKL_01056 0.0 dop 3.5.1.119 - S ko:K20814 - ko00000,ko01000,ko03051 Pup-ligase protein
GDDEPIKL_01057 1.16e-165 - - - G ko:K17195 ko00051,ko01120,map00051,map01120 ko00000,ko00001,ko01000 Ribulose-phosphate 3 epimerase family
GDDEPIKL_01058 3.44e-131 - 3.8.1.2 - S ko:K01560,ko:K07025 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
GDDEPIKL_01059 0.0 arc - - O ko:K13527 ko03050,map03050 ko00000,ko00001,ko00002,ko03051 AAA ATPase forming ring-shaped complexes
GDDEPIKL_01060 2.05e-163 - - - S - - - SNARE associated Golgi protein
GDDEPIKL_01061 1.43e-154 serB 3.1.3.3 - E ko:K01079 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01009 haloacid dehalogenase-like hydrolase
GDDEPIKL_01062 0.0 priA - - L ko:K04066 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GDDEPIKL_01063 5.05e-170 - 3.8.1.2 - S ko:K01560,ko:K07025 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
GDDEPIKL_01064 2.61e-235 fmt 2.1.2.9 - J ko:K00604 ko00670,ko00970,map00670,map00970 ko00000,ko00001,ko01000 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
GDDEPIKL_01065 0.0 ilvD 4.2.1.9 - H ko:K01687 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the IlvD Edd family
GDDEPIKL_01066 5.45e-61 rpoZ 2.7.7.6 - K ko:K03060 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
GDDEPIKL_01067 2.77e-290 metK 2.5.1.6 - H ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
GDDEPIKL_01068 0.0 ileS 6.1.1.5 - J ko:K01870 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
GDDEPIKL_01069 9.72e-229 rbsK 2.7.1.15 - H ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GDDEPIKL_01070 3e-89 rbsD 5.4.99.62 - G ko:K06726 ko02010,map02010 ko00000,ko00001,ko01000 RbsD / FucU transport protein family
GDDEPIKL_01071 8.68e-207 rbsB - - G ko:K10439 ko02010,ko02030,map02010,map02030 ko00000,ko00001,ko00002,ko02000 Periplasmic binding protein domain
GDDEPIKL_01072 4.24e-211 rbsC - - U ko:K10439,ko:K10440 ko02010,ko02030,map02010,map02030 ko00000,ko00001,ko00002,ko02000 Branched-chain amino acid transport system / permease component
GDDEPIKL_01073 0.0 rbsA 3.6.3.17 - G ko:K10441 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
GDDEPIKL_01074 1.11e-237 rbsR - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
GDDEPIKL_01075 2.95e-49 - - - L ko:K07485 - ko00000 Transposase
GDDEPIKL_01076 0.0 - - - EGP ko:K08168 - ko00000,ko00002,ko01504,ko02000 Major Facilitator Superfamily
GDDEPIKL_01077 6.69e-208 rbsK 2.7.1.15 - G ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GDDEPIKL_01078 5.37e-290 bdhA - - C ko:K19955 - ko00000,ko01000 Iron-containing alcohol dehydrogenase
GDDEPIKL_01079 1.51e-168 - 3.1.3.18 - S ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
GDDEPIKL_01080 5.76e-243 rihB 3.2.2.1, 3.2.2.8 - F ko:K01239,ko:K01250,ko:K10213 ko00230,ko00240,ko00760,ko01100,map00230,map00240,map00760,map01100 ko00000,ko00001,ko01000 Inosine-uridine preferring nucleoside hydrolase
GDDEPIKL_01081 1.01e-227 - 2.7.1.45 - G ko:K00874 ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 pfkB family carbohydrate kinase
GDDEPIKL_01082 1.33e-153 trpF 5.3.1.24 - E ko:K01817 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 N-(5'phosphoribosyl)anthranilate (PRA) isomerase
GDDEPIKL_01083 7.8e-197 - - - P ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
GDDEPIKL_01084 1.1e-194 - - - P ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
GDDEPIKL_01085 2.1e-180 cbiQ - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Cobalt transport protein
GDDEPIKL_01086 2.16e-133 - - - T ko:K16923 - ko00000,ko00002,ko02000 ECF transporter, substrate-specific component
GDDEPIKL_01087 0.0 - 2.7.1.15 - H ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GDDEPIKL_01088 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter transmembrane region
GDDEPIKL_01089 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter, ATP-binding protein
GDDEPIKL_01090 1.23e-117 - - - K - - - MarR family
GDDEPIKL_01091 0.0 bglB 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Glycosyl hydrolase family 3 N-terminal domain protein
GDDEPIKL_01092 1.97e-110 - - - K - - - Bacterial regulatory proteins, tetR family
GDDEPIKL_01093 1.63e-269 - 3.2.1.4, 3.2.1.58 GH5,GH9 G ko:K01179,ko:K01210 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 5 (cellulase A) family
GDDEPIKL_01094 7.61e-93 - - - S - - - Nucleotidyltransferase substrate binding protein like
GDDEPIKL_01095 7.12e-62 - - - S - - - Nucleotidyltransferase domain
GDDEPIKL_01096 1.84e-256 - - - G ko:K03292 - ko00000 Psort location CytoplasmicMembrane, score 10.00
GDDEPIKL_01097 2.19e-308 - - - S - - - Protein of unknown function (DUF4038)
GDDEPIKL_01098 1.06e-101 - - - K - - - Bacterial regulatory proteins, tetR family
GDDEPIKL_01099 1.8e-261 - - - G - - - Transporter major facilitator family protein
GDDEPIKL_01100 1.57e-64 - - - K - - - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
GDDEPIKL_01102 9.04e-24 - - - T - - - Histidine kinase
GDDEPIKL_01103 7.51e-89 mgtC - - S ko:K07507 - ko00000,ko02000 MgtC family
GDDEPIKL_01104 1.65e-31 - - - K - - - Antidote-toxin recognition MazE, bacterial antitoxin
GDDEPIKL_01105 1.67e-49 - - - S - - - PIN domain
GDDEPIKL_01106 0.0 bgl2 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Fibronectin type III-like domain
GDDEPIKL_01107 2.72e-160 - - - EP ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 N-terminal TM domain of oligopeptide transport permease C
GDDEPIKL_01108 4.83e-187 - - - EP ko:K02033 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_01109 2.79e-142 - - - E ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter
GDDEPIKL_01110 2.73e-141 - - - EP ko:K02031,ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ATPases associated with a variety of cellular activities
GDDEPIKL_01111 5.03e-237 - - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 PFAM extracellular solute-binding protein, family 5
GDDEPIKL_01112 1.02e-73 - - - K - - - Bacterial regulatory proteins, tetR family
GDDEPIKL_01113 1.4e-14 - - - K ko:K02855,ko:K07720 ko02020,map02020 ko00000,ko00001,ko00002,ko02022,ko03000 sequence-specific DNA binding
GDDEPIKL_01115 1.09e-248 - - - G - - - Belongs to the glycosyl hydrolase 2 family
GDDEPIKL_01116 2.71e-227 - - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 PFAM extracellular solute-binding protein, family 5
GDDEPIKL_01117 5.17e-153 - - - G - - - Glycosyl hydrolases family 43
GDDEPIKL_01118 0.0 egtA 6.3.2.2 - H ko:K01919 ko00270,ko00480,ko01100,map00270,map00480,map01100 ko00000,ko00001,ko00002,ko01000 Glutamate-cysteine ligase family 2(GCS2)
GDDEPIKL_01119 0.0 hgdC - - I - - - CoA enzyme activase uncharacterised domain (DUF2229)
GDDEPIKL_01120 1.89e-173 nrdG 1.97.1.4 - O ko:K04068 - ko00000,ko01000 Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GDDEPIKL_01121 0.0 nrdD 1.1.98.6 - F ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Anaerobic ribonucleoside-triphosphate reductase
GDDEPIKL_01122 0.0 xseA 3.1.11.6 - L ko:K03601 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GDDEPIKL_01123 1.7e-55 xseB 3.1.11.6 - L ko:K03602 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GDDEPIKL_01124 7.97e-117 ywrO - - S - - - Flavodoxin-like fold
GDDEPIKL_01125 0.0 fadD3 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 AMP-binding enzyme
GDDEPIKL_01126 3.3e-85 mscL - - M ko:K03282 - ko00000,ko02000 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
GDDEPIKL_01127 1.28e-102 - - - F - - - Nucleoside 2-deoxyribosyltransferase
GDDEPIKL_01129 2.01e-267 - - - S ko:K18353 ko01502,ko02020,map01502,map02020 ko00000,ko00001,ko00002,ko01504 Endonuclease/Exonuclease/phosphatase family
GDDEPIKL_01130 8.34e-229 ppx1 3.6.1.11, 3.6.1.40 - FP ko:K01524 ko00230,map00230 ko00000,ko00001,ko01000 Ppx/GppA phosphatase family
GDDEPIKL_01131 3.16e-299 aspB 2.6.1.1, 2.6.1.2, 2.6.1.66 - E ko:K00812,ko:K08969,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase class-V
GDDEPIKL_01132 2.14e-257 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
GDDEPIKL_01133 1.24e-114 vsr - - L ko:K07458 - ko00000,ko01000,ko03400 May nick specific sequences that contain T G mispairs resulting from m5C-deamination
GDDEPIKL_01134 1.5e-129 - - - K - - - Acetyltransferase (GNAT) domain
GDDEPIKL_01135 0.0 - - - KL - - - Psort location Cytoplasmic, score 8.87
GDDEPIKL_01136 3.56e-218 dapD 2.3.1.117 - E ko:K00674 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
GDDEPIKL_01137 9.67e-317 gltA 2.3.3.1 - C ko:K01647 ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Citrate synthase, C-terminal domain
GDDEPIKL_01138 1.25e-192 map 3.4.11.18 - E ko:K01265 - ko00000,ko01000,ko01002 Methionine aminopeptidase
GDDEPIKL_01139 2.91e-199 - - - S - - - Short repeat of unknown function (DUF308)
GDDEPIKL_01140 0.0 pepO 3.4.24.11, 3.4.24.71 - O ko:K01389,ko:K01415,ko:K07386 ko04614,ko04640,ko04974,ko05010,map04614,map04640,map04974,map05010 ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 Peptidase family M13
GDDEPIKL_01141 7.68e-151 ssb2 - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Single-strand binding protein family
GDDEPIKL_01142 0.0 proS 6.1.1.15 - J ko:K01881 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
GDDEPIKL_01143 1.39e-195 - 1.97.1.4 - O ko:K04069 - ko00000,ko01000 Radical SAM superfamily
GDDEPIKL_01144 0.0 - - - L - - - PIF1-like helicase
GDDEPIKL_01145 3.86e-156 orn - - L ko:K13288 ko03008,map03008 ko00000,ko00001,ko01000,ko03009,ko03019 3'-to-5' exoribonuclease specific for small oligoribonucleotides
GDDEPIKL_01146 0.0 guaB 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
GDDEPIKL_01147 1.44e-276 rfe 2.7.8.33, 2.7.8.35 - M ko:K02851 - ko00000,ko01000,ko01003,ko01005 Glycosyl transferase family 4
GDDEPIKL_01148 2.92e-153 ywlC 2.7.7.87 - J ko:K07566 - ko00000,ko01000,ko03009,ko03016 Belongs to the SUA5 family
GDDEPIKL_01149 3.38e-159 livF - - E ko:K01995,ko:K01996 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ATPases associated with a variety of cellular activities
GDDEPIKL_01150 4.72e-206 livG - - E ko:K01995 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Branched-chain amino acid ATP-binding cassette transporter
GDDEPIKL_01151 6.2e-241 - - - U ko:K01998 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
GDDEPIKL_01152 1.08e-196 - - - U ko:K01997 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
GDDEPIKL_01153 4.61e-272 - - - E ko:K01999 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Receptor family ligand binding region
GDDEPIKL_01154 2.17e-210 prmC 2.1.1.297 - J ko:K02493 - ko00000,ko01000,ko03012 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
GDDEPIKL_01155 1.22e-248 prfA - - J ko:K02835 - ko00000,ko03012 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
GDDEPIKL_01156 6.44e-49 rpmE - - J ko:K02909 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the 23S rRNA
GDDEPIKL_01158 9.08e-135 - - - U - - - Drug resistance MFS transporter, drug H antiporter-2 family
GDDEPIKL_01159 2.4e-187 - - - - - - - -
GDDEPIKL_01160 7.76e-89 fms 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins
GDDEPIKL_01161 5.53e-207 dkg - - S - - - Oxidoreductase, aldo keto reductase family protein
GDDEPIKL_01162 6.22e-21 - - - EGP - - - Major facilitator superfamily
GDDEPIKL_01163 4e-117 - - - K - - - Winged helix DNA-binding domain
GDDEPIKL_01164 8.67e-228 glkA 2.7.1.2 - G ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
GDDEPIKL_01166 0.0 - - - EGP - - - Major Facilitator Superfamily
GDDEPIKL_01167 0.0 yjjK - - S - - - ATP-binding cassette protein, ChvD family
GDDEPIKL_01168 8.55e-216 tesB - - I ko:K10805 ko01040,map01040 ko00000,ko00001,ko01000,ko01004 Thioesterase-like superfamily
GDDEPIKL_01169 3.27e-112 - - - S - - - Protein of unknown function (DUF3180)
GDDEPIKL_01170 1.37e-288 folK 2.7.6.3, 4.1.2.25 - H ko:K00950,ko:K13940 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
GDDEPIKL_01171 2.85e-207 folP 2.5.1.15 - H ko:K00796 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
GDDEPIKL_01172 1.9e-153 folE 3.5.4.16 - H ko:K01495 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 GTP cyclohydrolase
GDDEPIKL_01173 0.0 ftsH - - O ko:K03798 - ko00000,ko00002,ko01000,ko01002,ko03110 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GDDEPIKL_01174 1.08e-125 hpt 2.4.2.8 - F ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the purine pyrimidine phosphoribosyltransferase family
GDDEPIKL_01175 4.76e-268 tilS 2.4.2.8, 6.3.4.19 - J ko:K00760,ko:K04075 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000,ko03016 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
GDDEPIKL_01176 0.0 dacB 3.4.16.4 - M ko:K07259 ko00550,map00550 ko00000,ko00001,ko01000,ko01002,ko01011 D-Ala-D-Ala carboxypeptidase 3 (S13) family
GDDEPIKL_01177 0.0 - - - - ko:K01992 - ko00000,ko00002,ko02000 -
GDDEPIKL_01178 1.36e-244 natA - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
GDDEPIKL_01179 5.04e-298 - - - M - - - Glycosyl transferase family 21
GDDEPIKL_01180 0.0 - - - S - - - AI-2E family transporter
GDDEPIKL_01181 1.09e-226 - - - M - - - Glycosyltransferase like family 2
GDDEPIKL_01182 1.73e-270 fucO 1.1.1.77, 1.1.99.37, 1.2.98.1 - C ko:K00048,ko:K17067 ko00625,ko00630,ko00640,ko00680,ko01120,ko01200,map00625,map00630,map00640,map00680,map01120,map01200 ko00000,ko00001,ko01000 Iron-containing alcohol dehydrogenase
GDDEPIKL_01183 0.0 cfa 2.1.1.79 - M ko:K00574 - ko00000,ko01000 Mycolic acid cyclopropane synthetase
GDDEPIKL_01186 9.16e-211 trmB 2.1.1.33 - J ko:K03439 - ko00000,ko01000,ko03016 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
GDDEPIKL_01188 4.42e-19 - - - L - - - Phage integrase family
GDDEPIKL_01189 0.0 gph - - G ko:K16209 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
GDDEPIKL_01190 0.0 lacZ6 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
GDDEPIKL_01191 2.41e-235 - - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator, LacI family
GDDEPIKL_01192 1.65e-27 - - - L - - - Helix-turn-helix domain
GDDEPIKL_01193 0.0 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDDEPIKL_01194 1.98e-280 - - - GK - - - ROK family
GDDEPIKL_01196 0.0 - - - G - - - Glycosyl hydrolase family 20, domain 2
GDDEPIKL_01197 5.94e-09 - - - L - - - Integrase core domain
GDDEPIKL_01198 0.0 bga1 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
GDDEPIKL_01199 0.0 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDDEPIKL_01200 0.0 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDDEPIKL_01201 2.22e-184 coaX 2.7.1.33 - H ko:K03525 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
GDDEPIKL_01202 0.0 - - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substrate-binding protein, family 5
GDDEPIKL_01203 6.69e-216 - - - P ko:K02033 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_01204 8.92e-195 - - - EP ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_01205 2.27e-176 - - - EP ko:K02031 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 oligopeptide transport protein of the ABC superfamily, ATP-binding component
GDDEPIKL_01206 3.37e-177 - - - E ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ATPases associated with a variety of cellular activities
GDDEPIKL_01207 1.42e-245 cbs 2.5.1.47, 4.2.1.22 - E ko:K01697,ko:K01738 ko00260,ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Pyridoxal-phosphate dependent enzyme
GDDEPIKL_01208 7.5e-282 metB 2.5.1.48 - E ko:K01739 ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Cys/Met metabolism PLP-dependent enzyme
GDDEPIKL_01209 0.0 recQ 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
GDDEPIKL_01210 4.78e-120 luxS 4.4.1.21 - H ko:K07173 ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111 ko00000,ko00001,ko00002,ko01000 Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
GDDEPIKL_01211 4.15e-131 cysE - - J - - - COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GDDEPIKL_01212 2.01e-144 - - - K - - - helix_turn_helix, Deoxyribose operon repressor
GDDEPIKL_01213 3.17e-224 - - - G - - - Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
GDDEPIKL_01214 1.32e-303 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2264)
GDDEPIKL_01215 0.0 - 3.2.1.45 GH30 G ko:K01201 ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142 ko00000,ko00001,ko01000 Glycosyl hydrolase family 30 TIM-barrel domain
GDDEPIKL_01216 9.7e-201 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDDEPIKL_01217 1.02e-170 - - - U ko:K02025,ko:K17242 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_01218 5.31e-167 - - - U ko:K02026 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_01219 2.09e-44 - - - - - - - -
GDDEPIKL_01220 0.0 - - - M - - - Belongs to the glycosyl hydrolase 30 family
GDDEPIKL_01221 6.09e-205 - - - G ko:K16210 - ko00000,ko02000 MFS/sugar transport protein
GDDEPIKL_01222 1.7e-293 gnd 1.1.1.343, 1.1.1.44 - H ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
GDDEPIKL_01223 2.99e-83 gntK 2.7.1.12 - F ko:K00851 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko01000 Shikimate kinase
GDDEPIKL_01224 1.59e-295 - 4.2.1.8 - M ko:K08323 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 mandelate racemase muconate lactonizing
GDDEPIKL_01225 7.25e-243 mtlD 1.1.1.57, 1.1.1.58 - G ko:K00040,ko:K00041 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 Mannitol dehydrogenase C-terminal domain
GDDEPIKL_01226 9.76e-225 uxaC 5.3.1.12 - G ko:K01812 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 Glucuronate isomerase
GDDEPIKL_01227 3.71e-60 - - - FG - - - bis(5'-adenosyl)-triphosphatase activity
GDDEPIKL_01228 1.43e-89 - - - K ko:K02529,ko:K05499 - ko00000,ko03000 Periplasmic binding proteins and sugar binding domain of LacI family
GDDEPIKL_01229 2.83e-88 - - - K ko:K02529,ko:K05499 - ko00000,ko03000 Periplasmic binding proteins and sugar binding domain of LacI family
GDDEPIKL_01230 0.0 aap1 - - E ko:K03294 - ko00000 aromatic amino acid transport protein AroP K03293
GDDEPIKL_01231 0.0 alr 5.1.1.1 - M ko:K01775 ko00473,ko01100,ko01502,map00473,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GDDEPIKL_01232 2.91e-310 dgt 3.1.5.1 - F ko:K01129 ko00230,map00230 ko00000,ko00001,ko01000 Phosphohydrolase-associated domain
GDDEPIKL_01233 0.0 dnaG - - L ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
GDDEPIKL_01234 5.04e-90 - - - S - - - PIN domain
GDDEPIKL_01235 9.51e-47 - - - - - - - -
GDDEPIKL_01236 1.9e-198 pdxS 4.3.3.6 - H ko:K06215 ko00750,map00750 ko00000,ko00001,ko01000 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
GDDEPIKL_01237 1.2e-148 pdxT 4.3.3.6 - H ko:K08681 ko00750,map00750 ko00000,ko00001,ko01000 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
GDDEPIKL_01238 0.0 - - - EK ko:K03710,ko:K05825 ko00300,ko01100,ko01130,ko01210,map00300,map01100,map01130,map01210 ko00000,ko00001,ko01000,ko03000 Alanine-glyoxylate amino-transferase
GDDEPIKL_01239 1.36e-267 - - - P - - - Citrate transporter
GDDEPIKL_01240 9.8e-41 - - - - - - - -
GDDEPIKL_01241 1.34e-50 - - - G - - - Alpha-L-arabinofuranosidase C-terminal domain
GDDEPIKL_01242 1.84e-204 - - - K - - - Helix-turn-helix domain, rpiR family
GDDEPIKL_01245 0.0 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDDEPIKL_01246 9.75e-295 - - - K - - - helix_turn _helix lactose operon repressor
GDDEPIKL_01247 0.0 - 3.2.1.10 GH13 G ko:K01182 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain protein
GDDEPIKL_01248 3.62e-21 - - - L ko:K07483 - ko00000 Psort location Cytoplasmic, score 8.87
GDDEPIKL_01249 0.0 dppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substrate-binding protein, family 5
GDDEPIKL_01250 6.28e-111 msrA 1.8.4.11, 1.8.4.12 - O ko:K12267 - ko00000,ko01000 peptide-methionine (S)-S-oxide reductase activity
GDDEPIKL_01251 9.32e-184 - - - V ko:K02003,ko:K02004 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
GDDEPIKL_01252 1.71e-260 - - - M - - - Conserved repeat domain
GDDEPIKL_01253 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
GDDEPIKL_01254 0.0 dxs 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
GDDEPIKL_01255 6.88e-232 yogA - - C - - - Zinc-binding dehydrogenase
GDDEPIKL_01256 1.46e-111 purE 5.4.99.18 - F ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
GDDEPIKL_01257 5.74e-285 purK 6.3.4.18 - F ko:K01589 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
GDDEPIKL_01258 7.7e-95 fur - - P ko:K03711 - ko00000,ko03000 Belongs to the Fur family
GDDEPIKL_01259 1.65e-97 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
GDDEPIKL_01260 4.47e-33 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
GDDEPIKL_01261 9.71e-89 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
GDDEPIKL_01262 1.89e-57 - - - K - - - Transcriptional regulator C-terminal region
GDDEPIKL_01263 5.02e-47 - - - - - - - -
GDDEPIKL_01265 1.14e-179 - - - S - - - TIGRFAM TIGR03943 family protein
GDDEPIKL_01266 1.09e-253 - - - S ko:K07089 - ko00000 Predicted permease
GDDEPIKL_01267 1.78e-34 - - - P ko:K02077,ko:K09815 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
GDDEPIKL_01268 6.34e-27 - - - J ko:K02911 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Ribosomal L32p protein family
GDDEPIKL_01269 4.34e-21 rpmJ - - J ko:K02919 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L36
GDDEPIKL_01270 1.72e-45 rpmE2 - - J ko:K02909 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L31
GDDEPIKL_01271 1.24e-58 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GDDEPIKL_01272 5.79e-28 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L33
GDDEPIKL_01273 8.31e-40 rpmB - - J ko:K02902 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal L28 family
GDDEPIKL_01274 3.75e-126 - - - S - - - cobalamin synthesis protein
GDDEPIKL_01275 2.95e-210 - - - P ko:K02077 - ko00000,ko00002,ko02000 Zinc-uptake complex component A periplasmic
GDDEPIKL_01276 0.0 - - - M - - - Psort location CytoplasmicMembrane, score 9.26
GDDEPIKL_01277 0.0 aldH 1.2.1.3, 1.2.99.10 - C ko:K00128,ko:K22445 ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Aldehyde dehydrogenase family
GDDEPIKL_01278 1.48e-309 purD 6.3.3.1, 6.3.4.13 - F ko:K01945,ko:K11788 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the GARS family
GDDEPIKL_01279 5.52e-241 purM 6.3.3.1 - F ko:K01933 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoribosylformylglycinamidine cyclo-ligase
GDDEPIKL_01280 0.0 purF 2.4.2.14 - F ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
GDDEPIKL_01281 0.0 - - - L ko:K03502 - ko00000,ko03400 DNA-damage repair protein (DNA polymerase IV) K00961
GDDEPIKL_01282 3.86e-42 - - - - - - - -
GDDEPIKL_01283 1.95e-19 - - - C - - - Aldo/keto reductase family
GDDEPIKL_01284 2.2e-131 nnrE - - L - - - Uracil DNA glycosylase superfamily
GDDEPIKL_01288 3.96e-185 - - - - - - - -
GDDEPIKL_01289 1.61e-145 - - - Q - - - D-alanine [D-alanyl carrier protein] ligase activity
GDDEPIKL_01290 0.0 - - - Q - - - D-alanine [D-alanyl carrier protein] ligase activity
GDDEPIKL_01291 2.92e-314 - - - I - - - alpha/beta hydrolase fold
GDDEPIKL_01292 0.0 purL 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 CobB/CobQ-like glutamine amidotransferase domain
GDDEPIKL_01293 4.83e-176 purC 6.3.2.6 - F ko:K01923 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the SAICAR synthetase family
GDDEPIKL_01294 6.1e-294 purT 2.1.2.2 - F ko:K08289 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
GDDEPIKL_01295 5.18e-291 - 2.6.1.1, 2.6.1.2, 2.6.1.66, 2.6.1.83 - E ko:K00812,ko:K08969,ko:K10206,ko:K14260,ko:K14261 ko00220,ko00250,ko00270,ko00290,ko00300,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00300,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase class I and II
GDDEPIKL_01296 1.29e-278 - - - M - - - Glycosyl transferase 4-like domain
GDDEPIKL_01297 1.22e-251 ltaE 4.1.2.48 - E ko:K01620 ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 Beta-eliminating lyase
GDDEPIKL_01299 1.94e-247 - - - S ko:K03453 - ko00000 SBF-like CPA transporter family (DUF4137)
GDDEPIKL_01300 5.77e-81 rpsL - - J ko:K02950 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
GDDEPIKL_01301 1.9e-104 rpsG - - J ko:K02992 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
GDDEPIKL_01302 0.0 fusA - - J ko:K02355 - ko00000,ko03012,ko03029 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GDDEPIKL_01303 4.1e-293 tuf - - J ko:K02358 - ko00000,ko03012,ko03029,ko04147 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GDDEPIKL_01304 2.99e-164 tmp1 - - S - - - Domain of unknown function (DUF4391)
GDDEPIKL_01305 9e-187 - - - K - - - Bacterial regulatory helix-turn-helix protein, lysR family
GDDEPIKL_01306 5.88e-236 - - - S - - - Conserved hypothetical protein 698
GDDEPIKL_01308 3.75e-41 - - - S - - - Psort location CytoplasmicMembrane, score
GDDEPIKL_01309 9.65e-79 crcB - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GDDEPIKL_01310 6.07e-114 - - - D ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GDDEPIKL_01311 6.38e-87 - - - K - - - MerR family regulatory protein
GDDEPIKL_01312 1.48e-246 adh 1.1.1.1 - C ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 Zinc-binding dehydrogenase
GDDEPIKL_01313 1.34e-35 - - - S ko:K07133 - ko00000 Domain of unknown function (DUF4143)
GDDEPIKL_01314 4.12e-271 - - - S ko:K07133 - ko00000 Domain of unknown function (DUF4143)
GDDEPIKL_01315 2.82e-139 - - - P ko:K07220 - ko00000 Protein of unknown function DUF47
GDDEPIKL_01316 0.0 uvrA3 - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
GDDEPIKL_01317 1.55e-308 - - - V - - - MatE
GDDEPIKL_01318 9.33e-161 - - - L ko:K07457 - ko00000 endonuclease III
GDDEPIKL_01319 3.95e-07 - 1.5.1.40 - S ko:K06988 - ko00000,ko01000 NADP oxidoreductase coenzyme F420-dependent
GDDEPIKL_01320 3.5e-149 - 2.3.1.18, 2.3.1.79 - S ko:K00633,ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
GDDEPIKL_01321 6.79e-53 - 2.3.1.18, 2.3.1.79 - S ko:K00633,ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
GDDEPIKL_01322 6.15e-239 - - - S ko:K07088 - ko00000 Membrane transport protein
GDDEPIKL_01323 7.03e-62 - 4.1.1.44 - L ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Cupin 2, conserved barrel domain protein
GDDEPIKL_01325 0.0 - - - M - - - probably involved in cell wall
GDDEPIKL_01326 0.0 - 3.2.1.14 GH18 S ko:K01183 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Carbohydrate binding domain
GDDEPIKL_01327 1.23e-72 - - - T - - - Diguanylate cyclase, GGDEF domain
GDDEPIKL_01328 0.0 - - - T - - - Diguanylate cyclase, GGDEF domain
GDDEPIKL_01329 2.46e-175 - - - V ko:K02069 - ko00000,ko00002,ko02000 Uncharacterised protein family (UPF0014)
GDDEPIKL_01330 5e-162 - - - V ko:K02068 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
GDDEPIKL_01331 6.57e-136 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GDDEPIKL_01332 7.18e-121 nusB - - K ko:K03625 - ko00000,ko03009,ko03021 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GDDEPIKL_01333 1.78e-307 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the CarA family
GDDEPIKL_01334 0.0 carB 6.3.5.5 - EF ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase large chain, oligomerisation domain
GDDEPIKL_01335 2.65e-217 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Essential for recycling GMP and indirectly, cGMP
GDDEPIKL_01336 9.2e-136 gmk 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Essential for recycling GMP and indirectly, cGMP
GDDEPIKL_01337 2.93e-174 - 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Exonuclease, DNA polymerase III, epsilon subunit family
GDDEPIKL_01338 1.98e-06 - - - - - - - -
GDDEPIKL_01339 0.0 tetM - - J ko:K18220 - br01600,ko00000,ko01504 Elongation factor G, domain IV
GDDEPIKL_01340 1.31e-160 - - - S ko:K06999 - ko00000 Phospholipase/Carboxylesterase
GDDEPIKL_01341 1.57e-298 metC1 4.4.1.8 - E ko:K01760 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Cys/Met metabolism PLP-dependent enzyme
GDDEPIKL_01342 3.8e-56 - - - O - - - Glutaredoxin
GDDEPIKL_01343 1.41e-11 - 2.5.1.49 - E ko:K01740 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 Cys/Met metabolism PLP-dependent enzyme
GDDEPIKL_01344 1.79e-170 hflK - - O - - - prohibitin homologues
GDDEPIKL_01345 2.76e-71 - - - S ko:K07133 - ko00000 Domain of unknown function (DUF4143)
GDDEPIKL_01346 8.15e-204 - - - S - - - Patatin-like phospholipase
GDDEPIKL_01347 1.57e-188 murI 5.1.1.3 - M ko:K01776 ko00471,ko01100,map00471,map01100 ko00000,ko00001,ko01000,ko01011 Provides the (R)-glutamate required for cell wall biosynthesis
GDDEPIKL_01348 7.63e-218 dapF 5.1.1.7 - E ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
GDDEPIKL_01349 3.96e-165 - - - S - - - Vitamin K epoxide reductase
GDDEPIKL_01350 1.8e-215 PPA1328 3.1.3.97, 3.1.4.57 - S ko:K07053,ko:K20859 ko00440,map00440 ko00000,ko00001,ko01000 DNA polymerase alpha chain like domain
GDDEPIKL_01351 3.25e-44 - - - S - - - Protein of unknown function (DUF3107)
GDDEPIKL_01352 0.0 mphA - - S - - - Aminoglycoside phosphotransferase
GDDEPIKL_01353 0.0 uvrD2 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
GDDEPIKL_01354 0.0 - - - S - - - Zincin-like metallopeptidase
GDDEPIKL_01355 2.12e-210 sdrC - - T ko:K07177 ko02024,map02024 ko00000,ko00001,ko01002 Belongs to the peptidase S16 family
GDDEPIKL_01356 2.42e-96 - - - S - - - Protein of unknown function (DUF3052)
GDDEPIKL_01358 1.45e-296 - - - NU - - - Tfp pilus assembly protein FimV
GDDEPIKL_01359 1.45e-280 dxr 1.1.1.267 - I ko:K00099 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
GDDEPIKL_01360 6.58e-294 ispG 1.17.7.1, 1.17.7.3 - I ko:K03526 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
GDDEPIKL_01361 0.0 - - - I - - - acetylesterase activity
GDDEPIKL_01362 6.84e-166 recO - - L ko:K03584 ko03440,map03440 ko00000,ko00001,ko03400 Involved in DNA repair and RecF pathway recombination
GDDEPIKL_01363 1.58e-197 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 - H ko:K00806,ko:K14215,ko:K21273 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
GDDEPIKL_01364 2.46e-173 - - - P - - - Binding-protein-dependent transport system inner membrane component
GDDEPIKL_01365 5.32e-244 - - - P - - - NMT1/THI5 like
GDDEPIKL_01366 7.84e-284 - - - E - - - Aminotransferase class I and II
GDDEPIKL_01367 8.94e-179 - - - P ko:K16784 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
GDDEPIKL_01368 8.79e-09 - 2.8.2.22 - S ko:K01023 - ko00000,ko01000 Arylsulfotransferase Ig-like domain
GDDEPIKL_01369 0.0 - - - M - - - 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
GDDEPIKL_01370 0.0 - - - S - - - Tetratricopeptide repeat
GDDEPIKL_01371 0.0 ligA 6.5.1.2 - L ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 ko00000,ko00001,ko01000,ko03032,ko03400 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
GDDEPIKL_01372 3.87e-262 mrp - - D ko:K03593 - ko00000,ko03029,ko03036 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
GDDEPIKL_01373 0.0 glnA 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 glutamine synthetase
GDDEPIKL_01374 1.18e-181 - - - S - - - Domain of unknown function (DUF4191)
GDDEPIKL_01375 0.0 lpdA 1.8.1.4 - C ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GDDEPIKL_01376 4.43e-130 - - - S - - - Protein of unknown function (DUF3043)
GDDEPIKL_01377 0.0 argE - - E - - - Peptidase dimerisation domain
GDDEPIKL_01378 3.75e-141 ykoE - - S ko:K16925 - ko00000,ko00002,ko02000 ABC-type cobalt transport system, permease component
GDDEPIKL_01379 0.0 ykoD - - P ko:K16785,ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
GDDEPIKL_01380 5.41e-204 ykoC - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Cobalt transport protein
GDDEPIKL_01381 1.99e-205 tsnR - - J ko:K03437 - ko00000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GDDEPIKL_01382 4.35e-258 pheS 6.1.1.20 - J ko:K01889 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
GDDEPIKL_01383 0.0 pheT 6.1.1.20 - J ko:K01890 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Phenylalanyl-tRNA synthetase beta
GDDEPIKL_01384 5.13e-137 - - - - - - - -
GDDEPIKL_01385 6.95e-261 argC 1.2.1.38 - E ko:K00145 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
GDDEPIKL_01386 4.11e-273 argJ 2.3.1.1, 2.3.1.35 - E ko:K00620 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
GDDEPIKL_01387 1.38e-225 argB 2.7.2.8 - E ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the acetylglutamate kinase family. ArgB subfamily
GDDEPIKL_01388 5.79e-316 argD 2.6.1.11, 2.6.1.17 - E ko:K00821 ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase class-III
GDDEPIKL_01389 7.19e-234 argF 2.1.3.3 - E ko:K00611 ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
GDDEPIKL_01390 2.51e-109 argR - - K ko:K03402 - ko00000,ko03000 Regulates arginine biosynthesis genes
GDDEPIKL_01391 6.96e-303 argG 6.3.4.5 - E ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the argininosuccinate synthase family. Type 1 subfamily
GDDEPIKL_01392 1.05e-28 - - - P ko:K02049 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
GDDEPIKL_01393 1.81e-291 - - - L - - - PFAM Integrase catalytic
GDDEPIKL_01394 1.86e-45 - - - K ko:K03088 - ko00000,ko03021 Psort location Cytoplasmic, score 8.96
GDDEPIKL_01396 7.27e-207 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
GDDEPIKL_01397 2.53e-203 ylmA 3.6.3.34 - P ko:K02013 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
GDDEPIKL_01398 2.77e-311 glgA 2.4.1.342 GT4 G ko:K16148 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000,ko01003 Starch synthase catalytic domain
GDDEPIKL_01399 1.02e-107 - - - - - - - -
GDDEPIKL_01400 0.0 - - - S - - - Glycosyl hydrolases related to GH101 family, GH129
GDDEPIKL_01401 0.0 dppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substrate-binding protein, family 5
GDDEPIKL_01402 4.63e-71 - - - T - - - Histidine kinase
GDDEPIKL_01403 9.86e-80 - - - K - - - helix_turn_helix, Lux Regulon
GDDEPIKL_01404 5.77e-58 - - - - - - - -
GDDEPIKL_01406 0.0 gltD 1.4.1.13, 1.4.1.14 - C ko:K00266 ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
GDDEPIKL_01407 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 - E ko:K00265,ko:K00284 ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 glutamate synthase NADPH large subunit
GDDEPIKL_01408 6.47e-44 - - - K - - - helix_turn _helix lactose operon repressor
GDDEPIKL_01409 3.03e-32 - - - K - - - purine nucleotide biosynthetic process
GDDEPIKL_01410 1.59e-243 - - - K - - - helix_turn _helix lactose operon repressor
GDDEPIKL_01412 0.0 hemN - - H - - - Involved in the biosynthesis of porphyrin-containing compound
GDDEPIKL_01413 0.0 lepA - - M ko:K03596 ko05134,map05134 ko00000,ko00001 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
GDDEPIKL_01414 4.75e-47 rpsT - - J ko:K02968 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 16S ribosomal RNA
GDDEPIKL_01415 4.82e-179 - - - S - - - UPF0126 domain
GDDEPIKL_01416 3.22e-191 mazG 3.6.1.66 - S ko:K02428,ko:K02499 ko00230,map00230 ko00000,ko00001,ko01000,ko03036 Psort location Cytoplasmic, score 8.87
GDDEPIKL_01417 2.72e-288 ilvE 2.6.1.42 - E ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Amino-transferase class IV
GDDEPIKL_01418 2.59e-137 ctc - - J ko:K02897 ko03010,map03010 ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
GDDEPIKL_01419 8.78e-300 - - - EGP ko:K08177 - ko00000,ko02000 Major Facilitator Superfamily
GDDEPIKL_01420 2.11e-308 pntB 1.6.1.2 - C ko:K00325 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
GDDEPIKL_01421 3.55e-58 pntAB 1.6.1.2 - C ko:K00324 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 4TM region of pyridine nucleotide transhydrogenase, mitoch
GDDEPIKL_01422 2.83e-262 pntA 1.6.1.2 - C ko:K00324 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 NAD(P) transhydrogenase subunit alpha part 1 K00324
GDDEPIKL_01423 0.0 fadD2 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 AMP-binding enzyme
GDDEPIKL_01424 2.23e-235 era - - S ko:K03595 - ko00000,ko03009,ko03029 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
GDDEPIKL_01425 0.0 corC - - S - - - CBS domain
GDDEPIKL_01426 1.33e-133 ybeY - - S ko:K07042 - ko00000,ko03009 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
GDDEPIKL_01427 3.13e-274 phoH - - T ko:K06217 - ko00000 PhoH-like protein
GDDEPIKL_01428 2.76e-76 hit - - FG ko:K02503 - ko00000,ko04147 Scavenger mRNA decapping enzyme C-term binding
GDDEPIKL_01429 4.41e-175 - 2.1.1.193 - J ko:K09761 - ko00000,ko01000,ko03009 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
GDDEPIKL_01431 7.89e-212 spoU2 - - J - - - SpoU rRNA Methylase family
GDDEPIKL_01432 2.27e-309 glgC 2.7.7.27 - H ko:K00975 ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
GDDEPIKL_01433 2.19e-142 - - - S - - - Iron-sulfur cluster assembly protein
GDDEPIKL_01434 8.33e-133 iscU - - C ko:K04488 - ko00000 SUF system FeS assembly protein, NifU family
GDDEPIKL_01435 3.59e-302 sufS 2.8.1.7, 4.4.1.16 - E ko:K11717 ko00450,ko01100,map00450,map01100 ko00000,ko00001,ko01000 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
GDDEPIKL_01436 2.81e-184 sufC - - O ko:K09013 - ko00000,ko02000 FeS assembly ATPase SufC
GDDEPIKL_01437 2.06e-299 sufD - - O ko:K09015 - ko00000 FeS assembly protein SufD
GDDEPIKL_01438 0.0 sufB - - O ko:K09014 - ko00000 FeS assembly protein SufB
GDDEPIKL_01439 0.0 - - - S - - - L,D-transpeptidase catalytic domain
GDDEPIKL_01440 0.0 pyrG 6.3.4.2 - F ko:K01937 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
GDDEPIKL_01441 2.98e-104 aroQ 4.2.1.10 - E ko:K03786 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes a trans-dehydration via an enolate intermediate
GDDEPIKL_01442 0.0 aroB 2.7.1.71, 4.2.3.4 - H ko:K01735,ko:K13829 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
GDDEPIKL_01443 2.9e-275 aroC 4.2.3.5 - E ko:K01736 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
GDDEPIKL_01444 1.01e-90 - 3.4.23.43 - S ko:K02654 - ko00000,ko00002,ko01000,ko01002,ko02035,ko02044 Type IV leader peptidase family
GDDEPIKL_01445 5.37e-255 mltG - - S ko:K07082 - ko00000 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
GDDEPIKL_01446 6.08e-99 ruvX - - L ko:K07447 - ko00000,ko01000 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
GDDEPIKL_01447 0.0 alaS 6.1.1.7 - J ko:K01872 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GDDEPIKL_01448 6.59e-48 - - - - - - - -
GDDEPIKL_01449 1.28e-76 - - - S - - - Bacterial protein of unknown function (DUF948)
GDDEPIKL_01450 2.43e-166 - 5.4.2.12 - G ko:K15634 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Phosphoglycerate mutase family
GDDEPIKL_01451 2.55e-65 - - - L ko:K07473 - ko00000,ko02048 RelB antitoxin
GDDEPIKL_01452 8.67e-85 - - - T - - - PemK-like, MazF-like toxin of type II toxin-antitoxin system
GDDEPIKL_01453 1.03e-143 - - - E - - - Transglutaminase-like superfamily
GDDEPIKL_01454 9.02e-69 - - - S - - - SdpI/YhfL protein family
GDDEPIKL_01455 1.01e-115 - 3.5.4.5 - F ko:K01489 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 cytidine deaminase activity
GDDEPIKL_01456 6.43e-195 - - - S ko:K07010 - ko00000,ko01002 Peptidase C26
GDDEPIKL_01457 5.26e-141 rpsD - - J ko:K02986 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
GDDEPIKL_01458 2.6e-188 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
GDDEPIKL_01459 8.99e-275 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
GDDEPIKL_01460 3.12e-82 - - - S - - - Domain of unknown function (DUF4418)
GDDEPIKL_01461 0.0 pcrA 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
GDDEPIKL_01462 1.48e-135 xpt 2.4.2.22 - F ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000 Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
GDDEPIKL_01463 1.28e-308 pbuX - - F ko:K03458 - ko00000 Permease family
GDDEPIKL_01464 6.32e-42 - - - K ko:K07727 - ko00000,ko03000 Cro/C1-type HTH DNA-binding domain
GDDEPIKL_01465 1.11e-54 - - - S - - - Protein of unknown function (DUF2975)
GDDEPIKL_01466 5.96e-202 - - - I - - - Serine aminopeptidase, S33
GDDEPIKL_01467 6.81e-222 - - - M - - - pfam nlp p60
GDDEPIKL_01468 2.15e-138 pncA 3.5.1.19 - Q ko:K08281 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Isochorismatase family
GDDEPIKL_01469 6.64e-141 pepE 3.4.13.21 - E ko:K05995 - ko00000,ko01000,ko01002 Peptidase family S51
GDDEPIKL_01470 5.85e-260 - - - - - - - -
GDDEPIKL_01471 6.13e-52 - - - E - - - GDSL-like Lipase/Acylhydrolase family
GDDEPIKL_01472 0.0 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
GDDEPIKL_01473 0.0 - - - V ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
GDDEPIKL_01474 9.97e-287 - - - V ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
GDDEPIKL_01475 7.53e-239 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
GDDEPIKL_01476 4.49e-149 - 3.6.3.8 - P ko:K01537 - ko00000,ko01000 Cation transporter/ATPase, N-terminus
GDDEPIKL_01477 1.38e-309 - - - T - - - Histidine kinase
GDDEPIKL_01478 3.4e-146 - - - K - - - helix_turn_helix, Lux Regulon
GDDEPIKL_01479 6.7e-148 - - - P ko:K07220 - ko00000 Protein of unknown function DUF47
GDDEPIKL_01480 7.23e-241 pitB - - P ko:K03306 - ko00000 Phosphate transporter family
GDDEPIKL_01481 0.0 nplT 3.2.1.1 GH13 G ko:K01176 ko00500,ko01100,ko04973,map00500,map01100,map04973 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain
GDDEPIKL_01482 0.0 - - - JKL - - - helicase superfamily c-terminal domain
GDDEPIKL_01483 2.42e-298 rutG - - F ko:K02824,ko:K03458 - ko00000,ko02000 Permease family
GDDEPIKL_01484 1.72e-207 - - - G - - - Phosphoglycerate mutase family
GDDEPIKL_01485 1.54e-137 - - - E - - - haloacid dehalogenase-like hydrolase
GDDEPIKL_01486 3.66e-309 - - - EGP ko:K08217 - br01600,ko00000,ko01504,ko02000 Transmembrane secretion effector
GDDEPIKL_01488 2.38e-83 gloA - - E - - - Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GDDEPIKL_01489 2.5e-187 feoB - - P ko:K04759 - ko00000,ko02000 transporter of a GTP-driven Fe(2 ) uptake system
GDDEPIKL_01490 1.02e-76 - - - L ko:K07483 - ko00000 Integrase core domain
GDDEPIKL_01491 3.5e-54 - - - L ko:K07483 - ko00000 Psort location Cytoplasmic, score 8.87
GDDEPIKL_01492 9.17e-71 - - - L - - - Helix-turn-helix domain
GDDEPIKL_01493 2.15e-155 - - - S ko:K07090 - ko00000 Sulfite exporter TauE/SafE
GDDEPIKL_01494 0.0 - - - C ko:K06871 - ko00000 Iron-sulfur cluster-binding domain
GDDEPIKL_01495 0.0 - - - P - - - Domain of unknown function (DUF4976)
GDDEPIKL_01496 0.0 gtr - - U ko:K08139 ko04113,map04113 ko00000,ko00001,ko02000 Sugar (and other) transporter
GDDEPIKL_01497 4.91e-204 - 5.1.3.15 - G ko:K01792 ko00010,ko01100,ko01110,ko01120,ko01130,map00010,map01100,map01110,map01120,map01130 ko00000,ko00001,ko01000 Aldose 1-epimerase
GDDEPIKL_01498 5.28e-282 - - - GK - - - ROK family
GDDEPIKL_01499 2.11e-223 - 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
GDDEPIKL_01500 6.11e-189 nagB 3.5.99.6 - G ko:K02564 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GDDEPIKL_01501 1.53e-307 nagA 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Amidohydrolase family
GDDEPIKL_01502 0.0 glgP 2.4.1.1 GT35 G ko:K00688 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 ko00000,ko00001,ko01000 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
GDDEPIKL_01503 5.08e-17 - - - EGP ko:K08217 - br01600,ko00000,ko01504,ko02000 Transmembrane secretion effector
GDDEPIKL_01504 0.0 - - - U - - - Drug resistance MFS transporter, drug H antiporter-2 family
GDDEPIKL_01505 2.7e-17 - - - - - - - -
GDDEPIKL_01506 2.16e-255 ychF - - J ko:K06942 - ko00000,ko03009 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
GDDEPIKL_01507 9.65e-143 glnP2 - - E ko:K02029 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_01508 2.26e-153 glnP - - E ko:K02029,ko:K10040 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_01509 6.4e-176 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ATP binding protein of ABC transporter for glutamate aspartate K02028
GDDEPIKL_01510 3.42e-199 glnH - - ET ko:K02030,ko:K10039 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial periplasmic substrate-binding proteins
GDDEPIKL_01511 1.1e-188 proC 1.5.1.2 - E ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
GDDEPIKL_01512 0.0 pip 3.4.11.5 - S ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 alpha/beta hydrolase fold
GDDEPIKL_01513 0.0 - - - T - - - Histidine kinase
GDDEPIKL_01514 3.52e-181 - - - K - - - helix_turn_helix, Lux Regulon
GDDEPIKL_01515 0.0 - - - MV ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
GDDEPIKL_01516 4.4e-217 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
GDDEPIKL_01517 0.0 - 2.5.1.49 - E ko:K01740 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 Aminotransferase class-V
GDDEPIKL_01518 2.26e-210 pdxY 2.7.1.35 - H ko:K00868 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko01000 Phosphomethylpyrimidine kinase
GDDEPIKL_01519 4.32e-29 - - - L - - - Transposase and inactivated derivatives IS30 family
GDDEPIKL_01520 8.76e-99 yraN - - L ko:K07460 - ko00000 Belongs to the UPF0102 family
GDDEPIKL_01521 0.0 comM - - O ko:K07391 - ko00000 Magnesium chelatase, subunit ChlI C-terminal
GDDEPIKL_01522 0.0 dprA - - LU ko:K04096 - ko00000 DNA recombination-mediator protein A
GDDEPIKL_01523 0.0 sdhA 1.3.5.1, 1.3.5.4, 1.4.3.16 - C ko:K00239,ko:K00278 ko00020,ko00190,ko00250,ko00650,ko00720,ko00760,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00250,map00650,map00720,map00760,map01100,map01110,map01120,map01130,map01200,map05134 ko00000,ko00001,ko00002,ko01000 Succinate dehydrogenase flavoprotein subunit
GDDEPIKL_01524 3.43e-234 sdhB 1.3.5.1, 1.3.5.4 - C ko:K00240 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 4Fe-4S dicluster domain
GDDEPIKL_01525 2.38e-148 safC - - S - - - O-methyltransferase
GDDEPIKL_01526 2.76e-216 fmt2 3.2.2.10 - S ko:K06966 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the LOG family
GDDEPIKL_01527 6.11e-311 nhaA - - P ko:K03313 - ko00000,ko02000 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
GDDEPIKL_01528 3.19e-307 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I II
GDDEPIKL_01531 0.0 clpX - - O ko:K03544 ko04112,map04112 ko00000,ko00001,ko03110 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
GDDEPIKL_01532 1.56e-156 clpP 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GDDEPIKL_01533 2.96e-151 clpP1 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GDDEPIKL_01534 1.3e-78 - - - - - - - -
GDDEPIKL_01535 1.06e-313 - - - P ko:K03281 - ko00000 Voltage gated chloride channel
GDDEPIKL_01536 4.04e-302 tig - - D ko:K03545 - ko00000 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
GDDEPIKL_01537 0.0 rnd 3.1.13.5 - J ko:K03684 - ko00000,ko01000,ko03016 3'-5' exonuclease
GDDEPIKL_01538 5.51e-153 - - - S - - - Protein of unknown function (DUF3000)
GDDEPIKL_01539 5.19e-222 pflA 1.97.1.4 - C ko:K04069 - ko00000,ko01000 Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GDDEPIKL_01540 0.0 pflB 2.3.1.54 - C ko:K00656 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 ko00000,ko00001,ko01000 Pyruvate formate lyase-like
GDDEPIKL_01541 1.5e-52 - - - - - - - -
GDDEPIKL_01542 0.0 nadE 6.3.5.1 - H ko:K01950 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GDDEPIKL_01543 2.81e-285 - - - S - - - Peptidase dimerisation domain
GDDEPIKL_01544 3.9e-146 metI - - P ko:K02072 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_01545 6.93e-281 metN - - P ko:K02071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GDDEPIKL_01546 4.44e-226 - - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 NLPA lipoprotein
GDDEPIKL_01547 1.91e-199 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
GDDEPIKL_01550 1.45e-173 gpmB 3.1.3.85, 5.4.2.11 - G ko:K01834,ko:K22306 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Phosphoglycerate mutase family
GDDEPIKL_01551 5.45e-86 rsfS - - J ko:K09710 - ko00000,ko03009 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
GDDEPIKL_01552 0.0 glmU 2.3.1.157, 2.7.7.23 - M ko:K04042 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GDDEPIKL_01553 0.0 xfp 4.1.2.22, 4.1.2.9 - G ko:K01621 ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120 ko00000,ko00001,ko01000 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
GDDEPIKL_01554 0.0 guaA 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the synthesis of GMP from XMP
GDDEPIKL_01555 0.0 yrhL - - I - - - Psort location CytoplasmicMembrane, score 9.99
GDDEPIKL_01556 1.37e-244 prs 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GDDEPIKL_01558 0.0 pta 2.3.1.8 - C ko:K13788 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 phosphate acetyltransferase
GDDEPIKL_01559 8.03e-296 ackA 2.7.2.1 - H ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GDDEPIKL_01560 0.0 aroA 2.5.1.19 - E ko:K00800 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
GDDEPIKL_01561 3.26e-274 - - - - - - - -
GDDEPIKL_01562 5.2e-138 - - - - - - - -
GDDEPIKL_01563 1.7e-243 - - - L ko:K07496 - ko00000 Helix-turn-helix domain
GDDEPIKL_01564 2.01e-74 - - - L - - - Transposase and inactivated derivatives IS30 family
GDDEPIKL_01565 1.64e-143 - - - - - - - -
GDDEPIKL_01566 1.94e-271 asd 1.2.1.11 - E ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GDDEPIKL_01567 2.87e-126 ask 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 ACT domain
GDDEPIKL_01568 6.3e-174 ask 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Amino acid kinase family
GDDEPIKL_01569 1.31e-245 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
GDDEPIKL_01570 1.1e-90 - - - V - - - Abi-like protein
GDDEPIKL_01571 1.74e-273 - 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
GDDEPIKL_01572 2.45e-119 - - - - - - - -
GDDEPIKL_01573 3.21e-213 - - - - - - - -
GDDEPIKL_01574 3.31e-194 - - - L ko:K07454 - ko00000 HNH endonuclease
GDDEPIKL_01576 2.63e-60 - - - L ko:K07483 - ko00000 Transposase
GDDEPIKL_01577 6.21e-172 tnp3521a2 - - L - - - Integrase core domain
GDDEPIKL_01578 1.13e-222 - - - S - - - Domain of unknown function (DUF4928)
GDDEPIKL_01579 8.26e-294 - 2.1.1.37 - L ko:K00558 ko00270,ko01100,ko05206,map00270,map01100,map05206 ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036 Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
GDDEPIKL_01580 0.0 - - - S - - - FRG domain
GDDEPIKL_01581 0.0 - - - T - - - AAA domain
GDDEPIKL_01582 8.39e-38 - - - - - - - -
GDDEPIKL_01583 0.0 intA - - L - - - Phage integrase, N-terminal SAM-like domain
GDDEPIKL_01585 0.0 - - - P ko:K07243 - ko00000,ko02000 Iron permease FTR1 family
GDDEPIKL_01586 5.41e-159 - - - P ko:K07230 - ko00000,ko02000 Fe2+ transport protein
GDDEPIKL_01587 5e-292 - - - S - - - Predicted membrane protein (DUF2318)
GDDEPIKL_01588 7.36e-291 - - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
GDDEPIKL_01589 1.15e-277 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
GDDEPIKL_01590 1.62e-186 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
GDDEPIKL_01591 1.68e-102 - - - S - - - FMN_bind
GDDEPIKL_01592 6.6e-130 - - - K - - - Psort location Cytoplasmic, score 8.87
GDDEPIKL_01593 0.0 - - - S ko:K01421 - ko00000 YhgE Pip domain protein
GDDEPIKL_01594 0.0 - - - S ko:K01421 - ko00000 YhgE Pip domain protein
GDDEPIKL_01595 0.0 - - - S - - - Putative ABC-transporter type IV
GDDEPIKL_01596 0.0 gnd 1.1.1.343, 1.1.1.44 - H ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
GDDEPIKL_01597 2.39e-191 pgl 3.1.1.31 - G ko:K01057 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
GDDEPIKL_01598 1.04e-247 opcA - - G - - - Glucose-6-phosphate dehydrogenase subunit
GDDEPIKL_01599 0.0 zwf 1.1.1.363, 1.1.1.49 - G ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
GDDEPIKL_01600 0.0 - 3.5.2.6 - V ko:K17836 ko00311,ko01130,ko01501,map00311,map01130,map01501 ko00000,ko00001,ko00002,ko01000,ko01504 Beta-lactamase enzyme family
GDDEPIKL_01602 0.0 - - - E ko:K08659 - ko00000,ko01000,ko01002 Peptidase family C69
GDDEPIKL_01603 2.29e-253 - 2.7.8.12 - M ko:K09809 - ko00000,ko01000 Glycosyltransferase like family 2
GDDEPIKL_01604 1.23e-194 icaR - - K - - - Bacterial regulatory proteins, tetR family
GDDEPIKL_01605 4.83e-233 ftsY - - U ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
GDDEPIKL_01606 1.12e-304 amt - - U ko:K03320 - ko00000,ko02000 Ammonium Transporter Family
GDDEPIKL_01607 1.27e-72 glnB - - K ko:K04751 ko02020,map02020 ko00000,ko00001 Nitrogen regulatory protein P-II
GDDEPIKL_01608 0.0 glnD 2.7.7.59 - O ko:K00990 ko02020,map02020 ko00000,ko00001,ko01000 Nucleotidyltransferase domain
GDDEPIKL_01609 4.25e-305 dinF - - V - - - MatE
GDDEPIKL_01610 0.0 dnaB 3.6.4.12 - L ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Participates in initiation and elongation during chromosome replication
GDDEPIKL_01611 0.0 murE - - M - - - Domain of unknown function (DUF1727)
GDDEPIKL_01612 5.46e-182 cobQ2 - - S ko:K07009 - ko00000 CobB/CobQ-like glutamine amidotransferase domain
GDDEPIKL_01613 2.49e-53 - - - S - - - granule-associated protein
GDDEPIKL_01614 0.0 - - - S ko:K03688 - ko00000 ABC1 family
GDDEPIKL_01615 1.28e-213 - - - K ko:K02529 - ko00000,ko03000 Periplasmic binding protein domain
GDDEPIKL_01616 4.9e-42 - - - L - - - Transposase
GDDEPIKL_01617 6.91e-56 - - - L - - - Transposase
GDDEPIKL_01618 0.0 surA - - M - - - Rib/alpha-like repeat
GDDEPIKL_01619 6.86e-14 - - - L - - - Transposase
GDDEPIKL_01620 9.18e-41 - - - L ko:K07483 - ko00000 Psort location Cytoplasmic, score 8.87
GDDEPIKL_01621 2.77e-112 - - - L ko:K07483 - ko00000 Integrase core domain
GDDEPIKL_01622 8.39e-285 - 3.2.1.187 GH121 DG ko:K18206 - ko00000,ko01000 Bacterial Ig-like domain (group 4)
GDDEPIKL_01623 1.31e-181 - - - S ko:K06997 - ko00000 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
GDDEPIKL_01624 8.48e-241 prs 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GDDEPIKL_01625 3.96e-178 - - - D - - - Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
GDDEPIKL_01626 2.77e-64 rpsF - - J ko:K02990 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Binds together with S18 to 16S ribosomal RNA
GDDEPIKL_01627 5.84e-92 ssb - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Single-stranded DNA-binding protein
GDDEPIKL_01628 2.15e-48 rpsR - - J ko:K02963 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
GDDEPIKL_01629 3.33e-92 rplI - - J ko:K02939 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
GDDEPIKL_01631 1.78e-51 ptsH - - G ko:K11189 - ko00000,ko02000 phosphoenolpyruvate-dependent sugar phosphotransferase system
GDDEPIKL_01632 0.0 ptsP 2.7.3.9 - G ko:K08483 ko02060,map02060 ko00000,ko00001,ko01000,ko02000 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GDDEPIKL_01633 2.68e-170 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
GDDEPIKL_01634 0.0 - 3.6.3.4, 3.6.3.54 - P ko:K01533,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 E1-E2 ATPase
GDDEPIKL_01635 9.49e-57 csoR - - S ko:K21600 - ko00000,ko03000 Metal-sensitive transcriptional repressor
GDDEPIKL_01636 2.18e-275 rmuC - - S ko:K09760 - ko00000 RmuC family
GDDEPIKL_01637 4.16e-143 pyrE1 - - F - - - Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GDDEPIKL_01638 4.23e-217 trmH 2.1.1.34 - J ko:K00556 - ko00000,ko01000,ko03016 RNA methyltransferase TrmH family
GDDEPIKL_01639 4.73e-214 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
GDDEPIKL_01640 2.66e-229 - - - - - - - -
GDDEPIKL_01641 3.79e-171 - - - K - - - Psort location Cytoplasmic, score
GDDEPIKL_01642 7.57e-68 gatC 6.3.5.6, 6.3.5.7 - J ko:K02435 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GDDEPIKL_01643 0.0 gatA 6.3.5.6, 6.3.5.7 - F ko:K02433 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
GDDEPIKL_01644 0.0 gatB 6.3.5.6, 6.3.5.7 - J ko:K02434 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GDDEPIKL_01645 2.37e-248 - - - J - - - Acetyltransferase (GNAT) domain
GDDEPIKL_01646 2.66e-68 - - - S - - - Protein of unknown function (DUF2469)
GDDEPIKL_01647 0.0 - - - H - - - Flavin containing amine oxidoreductase
GDDEPIKL_01648 0.0 rho - - K ko:K03628 ko03018,map03018 ko00000,ko00001,ko03019,ko03021 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
GDDEPIKL_01650 6.12e-47 pabC 4.1.3.38 - EH ko:K02619 ko00790,map00790 ko00000,ko00001,ko01000 Amino-transferase class IV
GDDEPIKL_01651 7.17e-190 - - - L ko:K07485 - ko00000 Transposase
GDDEPIKL_01652 1.25e-44 - - - K - - - AraC-like ligand binding domain
GDDEPIKL_01653 2.65e-192 araN - - G ko:K10188 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDDEPIKL_01654 2.39e-157 - - - P ko:K10189,ko:K10241 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_01655 7.65e-146 araQ - - U ko:K02026,ko:K10190,ko:K10242 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_01656 1.78e-157 rafA 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 alpha-galactosidase
GDDEPIKL_01657 7.25e-64 pabC 4.1.3.38 - EH ko:K02619 ko00790,map00790 ko00000,ko00001,ko01000 Amino-transferase class IV
GDDEPIKL_01658 7.71e-82 tyrA 5.4.99.5 - E ko:K04092 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Chorismate mutase type II
GDDEPIKL_01659 0.0 - - - S - - - domain protein
GDDEPIKL_01660 0.0 valS 6.1.1.9 - J ko:K01873 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
GDDEPIKL_01661 0.0 - - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding proteins, family 5 Middle
GDDEPIKL_01662 4.17e-163 nth 4.2.99.18 - L ko:K10773 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GDDEPIKL_01663 5.92e-170 glnR - - KT - - - Transcriptional regulatory protein, C terminal
GDDEPIKL_01664 1.07e-123 - - - - - - - -
GDDEPIKL_01665 1.93e-126 mntP - - P - - - Probably functions as a manganese efflux pump
GDDEPIKL_01666 1.95e-119 ppa 3.6.1.1 - C ko:K01507 ko00190,map00190 ko00000,ko00001,ko01000 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
GDDEPIKL_01667 0.0 glgE 2.4.99.16 GH13 G ko:K16147 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
GDDEPIKL_01668 0.0 - - - K - - - RNA polymerase II activating transcription factor binding
GDDEPIKL_01669 1.89e-121 - - - L - - - Phage integrase family
GDDEPIKL_01673 6.28e-33 - - - - - - - -
GDDEPIKL_01674 6.12e-97 - - - V - - - N-acetylmuramoyl-L-alanine amidase
GDDEPIKL_01675 1.63e-12 - - - - - - - -
GDDEPIKL_01678 2.53e-134 - - - - - - - -
GDDEPIKL_01679 2.46e-305 - - - NT - - - phage tail tape measure protein
GDDEPIKL_01680 1.17e-25 - - - - - - - -
GDDEPIKL_01681 5.21e-70 - - - - - - - -
GDDEPIKL_01682 5.66e-76 - - - - - - - -
GDDEPIKL_01683 7.89e-26 - - - - - - - -
GDDEPIKL_01684 1.52e-18 - - - - - - - -
GDDEPIKL_01686 6.09e-162 - - - S ko:K06904 - ko00000 Caudovirus prohead serine protease
GDDEPIKL_01687 4.16e-114 - - - S - - - Phage portal protein
GDDEPIKL_01688 1.48e-151 - - - S - - - Terminase
GDDEPIKL_01689 2.47e-21 - - - - - - - -
GDDEPIKL_01690 7.81e-07 - - - L - - - HNH nucleases
GDDEPIKL_01692 7.49e-35 - - - - - - - -
GDDEPIKL_01698 8.77e-16 - - - K - - - BetR domain
GDDEPIKL_01700 2.47e-263 metAA 2.3.1.46 - E ko:K00651 ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
GDDEPIKL_01701 7.71e-187 atpB - - C ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko03110 it plays a direct role in the translocation of protons across the membrane
GDDEPIKL_01702 9.96e-40 atpE - - C ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GDDEPIKL_01703 2.76e-98 atpF - - C ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
GDDEPIKL_01704 1.27e-185 atpH - - C ko:K02109,ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GDDEPIKL_01705 0.0 atpA 3.6.3.14 - C ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
GDDEPIKL_01706 3.59e-211 atpG - - C ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
GDDEPIKL_01707 0.0 atpD 3.6.3.14 - C ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
GDDEPIKL_01708 3.62e-65 atpC - - C ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane
GDDEPIKL_01709 1.23e-165 nucS - - L ko:K07503 - ko00000,ko01000 Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
GDDEPIKL_01710 5.97e-215 - 5.2.1.8 - M ko:K01802 - ko00000,ko01000 FKBP-type peptidyl-prolyl cis-trans isomerase
GDDEPIKL_01711 2.14e-242 - - - - - - - -
GDDEPIKL_01712 5.43e-231 - - - - - - - -
GDDEPIKL_01713 5.13e-219 ybbN - - O ko:K05838 - ko00000,ko03110 Tetratricopeptide repeat
GDDEPIKL_01714 3.19e-151 - - - S - - - CYTH
GDDEPIKL_01717 3.27e-83 psp1 3.5.99.10 - J ko:K09022 - ko00000,ko01000 Endoribonuclease L-PSP
GDDEPIKL_01718 2.95e-240 plsC2 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Phosphate acyltransferases
GDDEPIKL_01719 3.39e-229 gpsA 1.1.1.94 - I ko:K00057 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
GDDEPIKL_01720 1e-291 ddl 6.3.2.4 - F ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Belongs to the D-alanine--D-alanine ligase family
GDDEPIKL_01721 2.49e-277 - - - P ko:K02055 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDDEPIKL_01722 6.88e-207 - - - U ko:K02054 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_01723 2.04e-170 - - - U ko:K02053 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_01724 7.87e-304 - - - E ko:K02052 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
GDDEPIKL_01725 3.72e-239 - - - S - - - CAAX protease self-immunity
GDDEPIKL_01726 3.93e-177 - - - M - - - Mechanosensitive ion channel
GDDEPIKL_01727 0.0 aspA 4.3.1.1 - E ko:K01744 ko00250,ko01100,map00250,map01100 ko00000,ko00001,ko01000 Fumarase C C-terminus
GDDEPIKL_01729 2.84e-172 - - - S ko:K07090 - ko00000 Sulfite exporter TauE/SafE
GDDEPIKL_01730 0.0 - - - C ko:K06871 - ko00000 Iron-sulfur cluster-binding domain
GDDEPIKL_01731 2.02e-247 - - - K - - - helix_turn _helix lactose operon repressor
GDDEPIKL_01732 0.0 - - - P - - - Domain of unknown function (DUF4976)
GDDEPIKL_01733 0.0 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDDEPIKL_01734 1.52e-210 - - - P ko:K02025 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_01735 1.14e-227 - - - P ko:K02026 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_01736 5.26e-300 - - - S ko:K07133 - ko00000 AAA domain
GDDEPIKL_01737 3.75e-99 - - - L - - - PFAM Integrase catalytic
GDDEPIKL_01738 3.79e-76 - - - S - - - Predicted membrane protein (DUF2142)
GDDEPIKL_01739 2.19e-108 - - - M - - - Psort location CytoplasmicMembrane, score 9.26
GDDEPIKL_01740 5.15e-55 - - - M - - - Psort location CytoplasmicMembrane, score 9.26
GDDEPIKL_01741 1.18e-27 - - - M - - - Psort location CytoplasmicMembrane, score 9.26
GDDEPIKL_01743 1.21e-243 - - - M - - - Glycosyltransferase like family 2
GDDEPIKL_01744 6.58e-154 - - - - - - - -
GDDEPIKL_01745 1.29e-91 xylR - - GK - - - ROK family
GDDEPIKL_01746 7.81e-211 xylB 2.7.1.17 - G ko:K00854 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the FGGY kinase family
GDDEPIKL_01747 3.96e-100 - - - G - - - ABC-type sugar transport system periplasmic component
GDDEPIKL_01748 8.91e-145 - - - G - - - ATPases associated with a variety of cellular activities
GDDEPIKL_01749 2.84e-95 - - - P - - - branched-chain amino acid ABC transporter, permease protein
GDDEPIKL_01750 1.12e-71 - - - G - - - Branched-chain amino acid transport system / permease component
GDDEPIKL_01751 9.88e-57 hxlB 5.3.1.27 - G ko:K08094 ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230 ko00000,ko00001,ko00002,ko01000 sugar phosphate isomerase involved in capsule formation
GDDEPIKL_01752 4.66e-297 glf 5.4.99.9 - M ko:K01854 ko00052,ko00520,map00052,map00520 ko00000,ko00001,ko01000 UDP-galactopyranose mutase
GDDEPIKL_01753 8.45e-217 - - - - - - - -
GDDEPIKL_01754 9.71e-167 - - - S - - - Domain of unknown function (DUF4190)
GDDEPIKL_01755 7.26e-203 - - - Q - - - Fumarylacetoacetate (FAA) hydrolase family
GDDEPIKL_01756 9.45e-208 - - - S ko:K07088 - ko00000 Auxin Efflux Carrier
GDDEPIKL_01757 0.0 clpB - - O ko:K03695,ko:K03696 ko01100,ko04213,map01100,map04213 ko00000,ko00001,ko03110 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
GDDEPIKL_01759 2.38e-277 gluQ 6.1.1.17 - J ko:K01885 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
GDDEPIKL_01760 2.57e-274 glpQ 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 Glycerophosphoryl diester phosphodiesterase family
GDDEPIKL_01761 1.05e-107 rlmH 2.1.1.177 - J ko:K00783 - ko00000,ko01000,ko03009 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
GDDEPIKL_01762 9.47e-151 upp 2.4.2.9 - F ko:K00761 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
GDDEPIKL_01763 8.49e-66 - - - P ko:K02026 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_01764 0.0 - - - G - - - N-terminal domain of (some) glycogen debranching enzymes
GDDEPIKL_01765 4.9e-176 - - - - - - - -
GDDEPIKL_01766 5.3e-316 mutT 3.6.1.55 - LT ko:K03574 - ko00000,ko01000,ko03400 Phosphoglycerate mutase family
GDDEPIKL_01767 0.0 ppk 2.7.4.1 - P ko:K00937 ko00190,ko03018,map00190,map03018 ko00000,ko00001,ko01000,ko03019 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
GDDEPIKL_01768 0.0 - - - S - - - Calcineurin-like phosphoesterase
GDDEPIKL_01769 1.95e-180 ltbR - - K - - - Transcriptional regulator, IclR family, C-terminal domain protein
GDDEPIKL_01770 0.0 leuC 4.2.1.33, 4.2.1.35 - E ko:K01703 ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
GDDEPIKL_01771 6.62e-171 leuD 4.2.1.33, 4.2.1.35 - E ko:K01704 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
GDDEPIKL_01772 3.36e-19 - - - S ko:K08981 - ko00000 Bacterial PH domain
GDDEPIKL_01774 4.34e-282 pyr 1.3.98.1 - F ko:K00226 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Dihydroorotate dehydrogenase
GDDEPIKL_01775 1.87e-168 - - - E ko:K10010,ko:K16960 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
GDDEPIKL_01776 1.23e-134 - - - S - - - L-2-amino-thiazoline-4-carboxylic acid hydrolase
GDDEPIKL_01777 1.55e-178 - - - P ko:K16959 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_01778 3.01e-155 - - - P ko:K16958 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_01779 1.07e-200 - - - ET ko:K16957 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial periplasmic substrate-binding proteins
GDDEPIKL_01780 0.0 nox - - C - - - Pyridine nucleotide-disulphide oxidoreductase
GDDEPIKL_01781 0.0 murA 2.5.1.7 - M ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GDDEPIKL_01782 1.63e-281 - - - G - - - Transmembrane secretion effector
GDDEPIKL_01783 4.49e-169 - - - K - - - Bacterial regulatory proteins, tetR family
GDDEPIKL_01784 0.0 argS 6.1.1.19 - J ko:K01887 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Arginyl-tRNA synthetase
GDDEPIKL_01785 0.0 lysA 4.1.1.20 - E ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
GDDEPIKL_01786 3.11e-72 - 2.7.1.208 - G ko:K02777,ko:K20107,ko:K20108 ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111 ko00000,ko00001,ko00002,ko01000,ko02000 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GDDEPIKL_01787 1.44e-65 nagE 2.7.1.193 - G ko:K02802,ko:K02803,ko:K02804 ko00520,ko02060,map00520,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system, EIIB
GDDEPIKL_01788 1.59e-303 hom 1.1.1.3, 2.7.2.4 - E ko:K00003,ko:K12524 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Homoserine dehydrogenase
GDDEPIKL_01789 1.01e-234 thrB 2.7.1.39 - E ko:K00872 ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
GDDEPIKL_01790 0.0 maf - - DF ko:K06287 - ko00000 Maf-like protein
GDDEPIKL_01791 4.05e-119 - - - K - - - Acetyltransferase (GNAT) family
GDDEPIKL_01792 3.47e-38 - - - S - - - Protein of unknown function (DUF1778)
GDDEPIKL_01793 1.93e-172 lolD - - V ko:K02003 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
GDDEPIKL_01794 0.0 - - - V - - - Efflux ABC transporter, permease protein
GDDEPIKL_01795 4.75e-245 - - - K ko:K02529 - ko00000,ko03000 Bacterial regulatory proteins, lacI family
GDDEPIKL_01796 0.0 - 4.2.1.68 - M ko:K18334 ko00051,ko01120,map00051,map01120 ko00000,ko00001,ko01000 Enolase C-terminal domain-like
GDDEPIKL_01797 5.27e-191 - 1.1.1.100, 1.1.1.413 - IQ ko:K00059,ko:K18333,ko:K22322 ko00051,ko00061,ko00333,ko00780,ko01040,ko01100,ko01120,ko01130,ko01212,map00051,map00061,map00333,map00780,map01040,map01100,map01120,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 KR domain
GDDEPIKL_01798 1.93e-270 fucP - - G ko:K02429 - ko00000,ko02000 Major Facilitator Superfamily
GDDEPIKL_01799 1.64e-190 - - - S ko:K07046 ko00051,ko01120,map00051,map01120 ko00000,ko00001,ko01000 Amidohydrolase
GDDEPIKL_01800 6.01e-214 - 4.1.2.28 - EM ko:K22397 ko00040,map00040 ko00000,ko00001,ko01000 Dihydrodipicolinate synthetase family
GDDEPIKL_01801 1.58e-213 - - - S ko:K07088 - ko00000 Transporter, auxin efflux carrier (AEC) family protein
GDDEPIKL_01802 2.45e-293 dapE 3.5.1.18 - E ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Peptidase dimerisation domain
GDDEPIKL_01803 0.0 rne 3.1.26.12 - J ko:K08300,ko:K08301 ko03018,map03018 ko00000,ko00001,ko00002,ko01000,ko03009,ko03019 Ribonuclease E/G family
GDDEPIKL_01804 1.01e-62 rplU - - J ko:K02888 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to 23S rRNA in the presence of protein L20
GDDEPIKL_01805 1.44e-51 rpmA - - J ko:K02899 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal L27 protein
GDDEPIKL_01806 0.0 obg - - S ko:K03979 - ko00000,ko01000,ko03009 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
GDDEPIKL_01807 1.93e-252 proB 2.7.2.11 - E ko:K00931 ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
GDDEPIKL_01808 3.07e-301 - - - G - - - polysaccharide deacetylase
GDDEPIKL_01809 4.8e-293 aspC 2.6.1.1, 2.6.1.2, 2.6.1.66 - E ko:K00812,ko:K08969,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 DegT/DnrJ/EryC1/StrS aminotransferase family
GDDEPIKL_01811 4.95e-44 secE - - U ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
GDDEPIKL_01812 1.83e-172 nusG - - K ko:K02601 - ko00000,ko03009,ko03021 Participates in transcription elongation, termination and antitermination
GDDEPIKL_01813 5e-96 rplK - - J ko:K02867 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
GDDEPIKL_01814 1.75e-159 rplA - - J ko:K02863 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
GDDEPIKL_01815 3.74e-211 - - - QT - - - PucR C-terminal helix-turn-helix domain
GDDEPIKL_01816 0.0 - - - - - - - -
GDDEPIKL_01817 1.35e-207 birA 6.3.4.15 - H ko:K03524 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko01000,ko03000 Biotin/lipoate A/B protein ligase family
GDDEPIKL_01818 1.94e-118 bioY - - S ko:K03523 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 BioY family
GDDEPIKL_01819 0.0 accC 6.3.4.14, 6.4.1.2, 6.4.1.3 - I ko:K11263 ko00061,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase L chain, ATP binding domain protein
GDDEPIKL_01820 0.0 pccB - - I - - - Carboxyl transferase domain
GDDEPIKL_01822 4.39e-72 - - - S ko:K19784 - ko00000 NADPH-dependent FMN reductase
GDDEPIKL_01823 3.07e-20 - - - EGP - - - Transporter major facilitator family protein
GDDEPIKL_01827 8.33e-80 - - - S - - - Alpha/beta hydrolase family
GDDEPIKL_01828 3.04e-32 - - - - - - - -
GDDEPIKL_01829 6.01e-246 - - - K - - - Helix-turn-helix XRE-family like proteins
GDDEPIKL_01830 1.67e-34 yxiO - - G ko:K06902 ko04138,map04138 ko00000,ko00001,ko02000,ko04131 Major facilitator Superfamily
GDDEPIKL_01831 8.44e-71 - - - L - - - RelB antitoxin
GDDEPIKL_01832 1.05e-88 - - - T - - - Toxic component of a toxin-antitoxin (TA) module
GDDEPIKL_01833 4.27e-148 - - - K - - - helix_turn_helix, mercury resistance
GDDEPIKL_01834 4.38e-303 - - - S ko:K06902 ko04138,map04138 ko00000,ko00001,ko02000,ko04131 Vacuole effluxer Atg22 like
GDDEPIKL_01835 6.54e-250 - - - G - - - pfkB family carbohydrate kinase
GDDEPIKL_01836 1.05e-40 rpmB - - J ko:K02902 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal L28 family
GDDEPIKL_01837 0.0 recG 3.6.4.12 - L ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 helicase superfamily c-terminal domain
GDDEPIKL_01838 4.75e-132 rsmD 2.1.1.171 - L ko:K08316 - ko00000,ko01000,ko03009 Conserved hypothetical protein 95
GDDEPIKL_01839 1.44e-226 trmD 2.1.1.228 - J ko:K00554 - ko00000,ko01000,ko03016 Belongs to the RNA methyltransferase TrmD family
GDDEPIKL_01840 0.0 - - - O ko:K08303 ko05120,map05120 ko00000,ko00001,ko01000,ko01002 Peptidase family U32 C-terminal domain
GDDEPIKL_01841 8.66e-254 yfiH - - Q ko:K05810 - ko00000,ko01000 Multi-copper polyphenol oxidoreductase laccase
GDDEPIKL_01842 3.28e-194 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60 - I ko:K00991,ko:K21681 ko00040,ko00900,ko01100,ko01110,ko01130,map00040,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
GDDEPIKL_01843 4.85e-159 pcp 3.4.19.3 - O ko:K01304 - ko00000,ko01000,ko01002 Removes 5-oxoproline from various penultimate amino acid residues except L-proline
GDDEPIKL_01844 2.17e-121 - - - D - - - nuclear chromosome segregation
GDDEPIKL_01845 0.0 pepC2 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
GDDEPIKL_01846 9.77e-279 aroG 2.5.1.54 - E ko:K01626 ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024 ko00000,ko00001,ko00002,ko01000 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
GDDEPIKL_01847 9.45e-300 aroG 2.5.1.54 - E ko:K01626 ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024 ko00000,ko00001,ko00002,ko01000 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
GDDEPIKL_01848 2.11e-159 mtnN 3.2.2.9 - E ko:K01243 ko00270,ko01100,ko01230,map00270,map01100,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GDDEPIKL_01849 9.26e-306 - - - EGP - - - Sugar (and other) transporter
GDDEPIKL_01850 3.14e-279 phoR 2.7.13.3 - T ko:K07636,ko:K07768 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 His Kinase A (phosphoacceptor) domain
GDDEPIKL_01851 1.5e-182 regX3 - - KT ko:K07776 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Transcriptional regulatory protein, C terminal
GDDEPIKL_01852 2.32e-260 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import
GDDEPIKL_01853 6.67e-212 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
GDDEPIKL_01854 1.86e-221 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphate transport system permease
GDDEPIKL_01855 4.51e-190 pstB 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GDDEPIKL_01856 0.0 - - - S ko:K06901 - ko00000,ko02000 Permease family
GDDEPIKL_01857 2.8e-186 - - - S - - - alpha beta
GDDEPIKL_01858 2.41e-113 rplJ - - J ko:K02864 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
GDDEPIKL_01859 1.06e-73 rplL - - J ko:K02935 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
GDDEPIKL_01860 4.41e-283 - - - T - - - Forkhead associated domain
GDDEPIKL_01861 0.0 - - - L - - - Superfamily I DNA and RNA helicases and helicase subunits
GDDEPIKL_01862 8.23e-39 - - - - - - - -
GDDEPIKL_01863 5.63e-137 - - - NO - - - SAF
GDDEPIKL_01864 6.24e-43 - - - S - - - Putative regulatory protein
GDDEPIKL_01865 1.03e-78 ygfA 6.3.3.2 - H ko:K01934 ko00670,ko01100,map00670,map01100 ko00000,ko00001,ko01000 5-formyltetrahydrofolate cyclo-ligase family
GDDEPIKL_01866 2.1e-112 rimJ 2.3.1.128 - J ko:K03790 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
GDDEPIKL_01867 1.32e-183 - - - - - - - -
GDDEPIKL_01868 1.73e-63 groS - - O ko:K04078 - ko00000,ko03029,ko03110 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GDDEPIKL_01872 1.03e-34 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L33
GDDEPIKL_01873 9.59e-287 murB 1.3.1.98 - M ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation
GDDEPIKL_01874 0.0 - - - E ko:K03294 - ko00000 aromatic amino acid transport protein AroP K03293
GDDEPIKL_01875 4.51e-79 fdxA - - C ko:K05524 - ko00000 4Fe-4S binding domain
GDDEPIKL_01876 8.83e-286 dapC - - E - - - Aminotransferase class I and II
GDDEPIKL_01877 1.65e-301 dinB 2.7.7.7 - L ko:K02346 - ko00000,ko01000,ko03400 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GDDEPIKL_01878 1.46e-28 - - - S ko:K11939 - ko00000,ko02000 EamA-like transporter family
GDDEPIKL_01879 1.25e-81 - - - S ko:K11939 - ko00000,ko02000 EamA-like transporter family
GDDEPIKL_01881 2.08e-30 - - - - - - - -
GDDEPIKL_01882 7.41e-277 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
GDDEPIKL_01883 2.69e-312 - - - G ko:K02027,ko:K10227 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDDEPIKL_01884 2.42e-208 - - - U ko:K02025 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_01885 8.21e-177 - - - U ko:K02026,ko:K10190 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_01886 4.71e-311 - 3.2.1.21 - G ko:K05350 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Glycosyl hydrolase family 1
GDDEPIKL_01887 1.04e-147 - - - M ko:K07282 - ko00000 Bacterial capsule synthesis protein PGA_cap
GDDEPIKL_01888 1.22e-235 pdxB - - EH - - - Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GDDEPIKL_01889 6.88e-144 yigZ - - S - - - Uncharacterized protein family UPF0029
GDDEPIKL_01890 9.47e-152 - - - - - - - -
GDDEPIKL_01891 0.0 malQ 2.4.1.25 GH77 G ko:K00705 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 4-alpha-glucanotransferase
GDDEPIKL_01892 5.33e-103 rplM - - J ko:K02871 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
GDDEPIKL_01893 9.6e-106 rpsI - - J ko:K02996 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS9 family
GDDEPIKL_01894 5.93e-10 - - - L - - - Helix-turn-helix domain
GDDEPIKL_01895 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G ko:K01214,ko:K02438 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the glycosyl hydrolase 13 family
GDDEPIKL_01896 2.24e-285 - - - GK - - - transcriptional repressor of nag (N-acetylglucosamine) operon K02565
GDDEPIKL_01897 0.0 adhE 1.1.1.1, 1.2.1.10, 1.2.1.81 - C ko:K04072,ko:K15515 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 belongs to the iron- containing alcohol dehydrogenase family
GDDEPIKL_01898 8.47e-184 - - - S - - - YwiC-like protein
GDDEPIKL_01899 1.15e-173 budA 4.1.1.5 - H ko:K01575 ko00650,ko00660,map00650,map00660 ko00000,ko00001,ko01000 Alpha-acetolactate decarboxylase
GDDEPIKL_01900 9.35e-68 rpsJ - - J ko:K02946 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Involved in the binding of tRNA to the ribosomes
GDDEPIKL_01901 1.11e-149 rplC - - J ko:K02906 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
GDDEPIKL_01902 9.78e-151 rplD - - J ko:K02926 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the polypeptide exit tunnel
GDDEPIKL_01903 2.54e-61 rplW - - J ko:K02892 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
GDDEPIKL_01904 3.85e-195 rplB - - J ko:K02886 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
GDDEPIKL_01905 1.4e-62 rpsS - - J ko:K02965 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
GDDEPIKL_01906 1.09e-74 rplV - - J ko:K02890 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
GDDEPIKL_01907 1.85e-156 rpsC - - J ko:K02982 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
GDDEPIKL_01908 3.85e-98 rplP - - J ko:K02878 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
GDDEPIKL_01909 1.97e-49 rpmC - - J ko:K02904 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uL29 family
GDDEPIKL_01910 1.11e-54 rpsQ - - J ko:K02961 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
GDDEPIKL_01911 2.55e-79 rplN - - J ko:K02874 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
GDDEPIKL_01912 5.4e-69 rplX - - J ko:K02895 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
GDDEPIKL_01913 1.95e-134 rplE - - J ko:K02931 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
GDDEPIKL_01914 7.06e-40 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GDDEPIKL_01915 3.17e-90 rpsH - - J ko:K02994 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
GDDEPIKL_01916 1.33e-122 rplF - - J ko:K02933 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
GDDEPIKL_01917 3.09e-76 rplR - - J ko:K02881 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
GDDEPIKL_01918 2.25e-129 rpsE - - J ko:K02988 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
GDDEPIKL_01919 3.26e-36 rpmD - - J ko:K02907 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L30p/L7e
GDDEPIKL_01920 1.07e-98 rplO - - J ko:K02876 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 binds to the 23S rRNA
GDDEPIKL_01921 9.34e-317 secY - - U ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
GDDEPIKL_01922 2.57e-128 adk 2.7.4.3 - F ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
GDDEPIKL_01923 6.91e-45 infA - - J ko:K02518 - ko00000,ko03012 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
GDDEPIKL_01924 1.47e-20 rpmJ - - J ko:K02919 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL36 family
GDDEPIKL_01925 2e-82 rpsM - - J ko:K02952 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
GDDEPIKL_01926 7.34e-86 rpsK - - J ko:K02948 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
GDDEPIKL_01927 8.1e-236 rpoA 2.7.7.6 - K ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GDDEPIKL_01928 2.44e-80 rplQ - - J ko:K02879 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L17
GDDEPIKL_01929 1.27e-218 truA 5.4.99.12 - J ko:K06173 - ko00000,ko01000,ko03016 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
GDDEPIKL_01930 0.0 gcs2 - - S ko:K06048 - ko00000,ko01000 A circularly permuted ATPgrasp
GDDEPIKL_01931 5.93e-194 - - - E - - - Transglutaminase/protease-like homologues
GDDEPIKL_01933 6.91e-124 - - - K - - - helix_turn _helix lactose operon repressor
GDDEPIKL_01934 1.13e-161 - - - - - - - -
GDDEPIKL_01935 1.3e-242 nusA - - K ko:K02600 - ko00000,ko03009,ko03021 Participates in both transcription termination and antitermination
GDDEPIKL_01936 0.0 infB - - J ko:K02519 - ko00000,ko03012,ko03029 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
GDDEPIKL_01937 3.5e-107 rbfA - - J ko:K02834 - ko00000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
GDDEPIKL_01938 2.13e-277 truB 5.4.99.25 - J ko:K03177 - ko00000,ko01000,ko03016 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
GDDEPIKL_01939 7.14e-279 ribF 2.7.1.26, 2.7.7.2 - H ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 riboflavin kinase
GDDEPIKL_01940 0.0 radA - - O ko:K04485 - ko00000,ko03400 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
GDDEPIKL_01941 4.12e-133 - - - - - - - -
GDDEPIKL_01942 5.05e-07 - - - S - - - Mitochondrial domain of unknown function (DUF1713)
GDDEPIKL_01943 4.47e-163 rpiA 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
GDDEPIKL_01944 3.7e-240 rnhA 3.1.26.4 - L ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GDDEPIKL_01945 0.0 merA 1.16.1.1 - C ko:K00520,ko:K21739 - ko00000,ko01000 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GDDEPIKL_01946 1.23e-96 - - - K - - - Transcriptional regulator
GDDEPIKL_01947 2.24e-225 - - - S - - - Protein conserved in bacteria
GDDEPIKL_01948 0.0 pgm 5.4.2.2 - G ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
GDDEPIKL_01949 0.0 ptsG - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 pts system, glucose-specific IIABC component
GDDEPIKL_01950 2.63e-208 arbG - - K ko:K03488 - ko00000,ko03000 CAT RNA binding domain
GDDEPIKL_01951 1.08e-269 - - - I - - - Diacylglycerol kinase catalytic domain
GDDEPIKL_01952 2.27e-307 serS 6.1.1.11 - J ko:K01875 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
GDDEPIKL_01954 0.0 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDDEPIKL_01955 3.93e-223 - - - G ko:K02025 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_01956 5.76e-217 - - - G ko:K02026 - ko00000,ko00002,ko02000 ABC transporter permease
GDDEPIKL_01957 0.0 gnpA 2.4.1.211 - S ko:K15533 - ko00000,ko01000 Lacto-N-biose phosphorylase C-terminal domain
GDDEPIKL_01958 1.7e-261 - 2.7.1.162 - S ko:K13059 - ko00000,ko01000 Phosphotransferase enzyme family
GDDEPIKL_01959 2.18e-224 galE 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family
GDDEPIKL_01960 1.01e-152 tcsR3 - - K - - - helix_turn_helix, Lux Regulon
GDDEPIKL_01961 2.84e-301 tcsS3 - - KT - - - PspC domain
GDDEPIKL_01962 0.0 pspC - - KT - - - PspC domain
GDDEPIKL_01963 8.93e-97 - - - - - - - -
GDDEPIKL_01964 0.0 - - - S ko:K06889 - ko00000 alpha beta
GDDEPIKL_01965 4.35e-150 - - - S - - - Protein of unknown function (DUF4125)
GDDEPIKL_01966 0.0 - - - S - - - Domain of unknown function (DUF4037)
GDDEPIKL_01967 4.86e-279 - - - EGP ko:K08156,ko:K19577 - ko00000,ko02000 Major Facilitator Superfamily
GDDEPIKL_01969 0.0 lysS 6.1.1.6 - J ko:K04567 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family
GDDEPIKL_01970 3.23e-221 menA 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the MenA family. Type 1 subfamily
GDDEPIKL_01971 3.9e-178 gpmA 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GDDEPIKL_01972 1.55e-150 phoU - - P ko:K02039 - ko00000 Plays a role in the regulation of phosphate uptake
GDDEPIKL_01973 1.12e-239 senX3 2.7.13.3 - T ko:K07768 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 ATPase histidine kinase DNA gyrase B HSP90 domain protein
GDDEPIKL_01974 6.59e-44 - - - - - - - -
GDDEPIKL_01975 2.76e-269 serC 2.6.1.52 - E ko:K00831 ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
GDDEPIKL_01976 2.08e-216 - - - S - - - CHAP domain
GDDEPIKL_01977 1.45e-138 - - - M - - - NlpC/P60 family
GDDEPIKL_01978 3.11e-142 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC/P60 family
GDDEPIKL_01979 1.36e-241 - - - T - - - Universal stress protein family
GDDEPIKL_01980 1.85e-95 - - - O - - - OsmC-like protein
GDDEPIKL_01981 1.73e-214 thyA 2.1.1.45 - F ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
GDDEPIKL_01982 1.07e-164 folA 1.5.1.3 - H ko:K00287 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 ko00000,ko00001,ko00002,ko01000 dihydrofolate reductase
GDDEPIKL_01983 1.22e-126 ptpA 3.1.3.48 - T ko:K01104 - ko00000,ko01000 low molecular weight
GDDEPIKL_01984 9.79e-143 vex - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
GDDEPIKL_01985 1.94e-270 - - - V ko:K02004 - ko00000,ko00002,ko02000 Efflux ABC transporter, permease protein
GDDEPIKL_01986 2.53e-288 - - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
GDDEPIKL_01987 9.16e-240 - - - K - - - Periplasmic binding protein domain
GDDEPIKL_01988 1.46e-179 - 5.4.99.28, 5.4.99.29 - J ko:K06177 - ko00000,ko01000,ko03009,ko03016 RNA pseudouridylate synthase
GDDEPIKL_01989 0.0 glmS 2.6.1.16 - M ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 ko00000,ko00001,ko01000,ko01002 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
GDDEPIKL_01990 3.69e-193 tcyC 3.6.3.21 - E ko:K02028,ko:K02029 - ko00000,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
GDDEPIKL_01991 3.78e-223 yecS - - E ko:K02029 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDDEPIKL_01992 1.53e-215 glnH - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter, substrate-binding protein, family 3
GDDEPIKL_01993 8.22e-203 glnH - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter, substrate-binding protein, family 3
GDDEPIKL_01994 3.26e-106 smpB - - J ko:K03664 - ko00000 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
GDDEPIKL_01995 2.5e-210 - - - D ko:K21471 - ko00000,ko01000,ko01002,ko01011 CHAP domain protein
GDDEPIKL_01996 1.9e-206 ftsX - - D ko:K09811 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03036 Part of the ABC transporter FtsEX involved in cellular division
GDDEPIKL_01997 7.91e-270 ftsE - - D ko:K09812 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03036 Cell division ATP-binding protein FtsE
GDDEPIKL_01998 2.52e-263 prfB - - J ko:K02836 - ko00000,ko03012 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
GDDEPIKL_01999 0.0 - - - L - - - Psort location Cytoplasmic, score
GDDEPIKL_02000 5.28e-159 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GDDEPIKL_02001 0.0 glmM 5.4.2.10 - G ko:K03431 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko01000 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GDDEPIKL_02002 0.0 pepN 3.4.11.2 - E ko:K01256,ko:K08776 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 Peptidase family M1 domain
GDDEPIKL_02003 0.0 rnj - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GDDEPIKL_02004 2.06e-208 dapA 4.3.3.7 - E ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GDDEPIKL_02005 2.66e-169 dapB 1.17.1.8 - E ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
GDDEPIKL_02006 9.52e-301 - - - G - - - Major Facilitator Superfamily
GDDEPIKL_02007 0.0 uvrD2 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 Belongs to the helicase family. UvrD subfamily
GDDEPIKL_02008 0.0 - - - L - - - PD-(D/E)XK nuclease superfamily
GDDEPIKL_02009 7.2e-283 pknK 2.7.11.1 - KLT ko:K12132 - ko00000,ko01000,ko01001 Protein tyrosine kinase
GDDEPIKL_02010 0.0 - - - S - - - Fibronectin type 3 domain
GDDEPIKL_02011 5.59e-309 - - - S - - - Protein of unknown function DUF58
GDDEPIKL_02012 0.0 - - - E - - - Transglutaminase-like superfamily
GDDEPIKL_02013 0.0 rpoC 2.7.7.6 - K ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GDDEPIKL_02014 0.0 rpoB 2.7.7.6 - K ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GDDEPIKL_02015 1.56e-165 - - - - - - - -
GDDEPIKL_02016 5.09e-238 mutY - - L ko:K03575 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 FES
GDDEPIKL_02017 3.37e-148 spoU 2.1.1.207 - J ko:K03216 - ko00000,ko01000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
GDDEPIKL_02018 0.0 - - - S ko:K09157 - ko00000 UPF0210 protein
GDDEPIKL_02019 7.93e-59 - - - T ko:K07166 - ko00000 Belongs to the UPF0237 family
GDDEPIKL_02020 6.15e-299 galK 2.7.1.6, 2.7.7.12 - G ko:K00849,ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GHMP kinase family. GalK subfamily
GDDEPIKL_02021 0.0 galT 2.7.7.12 - C ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 ko00000,ko00001,ko00002,ko01000 Galactose-1-phosphate uridyl transferase, N-terminal domain
GDDEPIKL_02022 3.61e-158 - - - K - - - DeoR C terminal sensor domain
GDDEPIKL_02023 3.75e-290 pyrD 1.3.5.2, 1.3.98.1 - F ko:K00226,ko:K00254 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
GDDEPIKL_02024 9.99e-305 namA - - C - - - NADH:flavin oxidoreductase / NADH oxidase family
GDDEPIKL_02025 0.0 pon1 - - M - - - Transglycosylase
GDDEPIKL_02026 2.7e-172 crp - - K ko:K10914 ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111 ko00000,ko00001,ko03000 helix_turn_helix, cAMP Regulatory protein
GDDEPIKL_02027 9.39e-277 lplA 6.3.1.20 - H ko:K03800 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Biotin/lipoate A/B protein ligase family
GDDEPIKL_02028 7.3e-245 leuB 1.1.1.85 - CE ko:K00052 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
GDDEPIKL_02029 0.0 ptrB 3.4.21.83 - E ko:K01354 ko05142,ko05143,map05142,map05143 ko00000,ko00001,ko01000,ko01002 Peptidase, S9A B C family, catalytic domain protein
GDDEPIKL_02030 4.05e-284 - - - S - - - Uncharacterized conserved protein (DUF2183)
GDDEPIKL_02031 1.26e-91 gcvH - - E ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 ko00000,ko00001,ko00002 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
GDDEPIKL_02032 1.7e-281 nudC 3.6.1.22 - L ko:K03426 ko00760,ko01100,ko04146,map00760,map01100,map04146 ko00000,ko00001,ko01000 NADH pyrophosphatase zinc ribbon domain
GDDEPIKL_02033 2.34e-203 - - - I - - - Alpha/beta hydrolase family
GDDEPIKL_02034 7.47e-156 - - - F - - - Domain of unknown function (DUF4916)
GDDEPIKL_02035 5.55e-79 trxA 1.8.1.9 - O ko:K00384,ko:K03671 ko00450,ko04621,ko05418,map00450,map04621,map05418 ko00000,ko00001,ko01000,ko03110 Belongs to the thioredoxin family
GDDEPIKL_02036 7.3e-221 - - - S ko:K21688 - ko00000 G5
GDDEPIKL_02037 2.24e-273 - - - - - - - -
GDDEPIKL_02038 6.64e-314 wcoI - - DM - - - Psort location CytoplasmicMembrane, score
GDDEPIKL_02039 2.88e-91 - - - - - - - -
GDDEPIKL_02040 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 9.99
GDDEPIKL_02041 3.97e-12 - - - L - - - Transposase and inactivated derivatives IS30 family
GDDEPIKL_02043 1.51e-128 - - - S - - - enterobacterial common antigen metabolic process
GDDEPIKL_02044 3.2e-60 - - - S - - - enterobacterial common antigen metabolic process
GDDEPIKL_02046 2.56e-115 - - - K - - - Helix-turn-helix XRE-family like proteins
GDDEPIKL_02048 1.69e-58 - - - S - - - Bacteriophage abortive infection AbiH
GDDEPIKL_02049 0.0 - - - C - - - Domain of unknown function (DUF4365)
GDDEPIKL_02050 2.38e-72 - - - L - - - PFAM Integrase catalytic
GDDEPIKL_02051 7.86e-40 - - - L - - - Transposase
GDDEPIKL_02052 8.04e-49 - - - L - - - PFAM Integrase catalytic
GDDEPIKL_02054 2.15e-09 - - - L - - - PFAM Integrase catalytic

eggNOG-mapper v2.1.12 (Database: eggNOG v5.0.2, Mar. 2021 release)