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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
NEKLCKCI_00001	1.72e-18	-	-	-	-	-	-	-	-
NEKLCKCI_00002	2.28e-218	-	5.1.3.15	-	G	ko:K01792	ko00010,ko01100,ko01110,ko01120,ko01130,map00010,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	Aldose 1-epimerase
NEKLCKCI_00003	7.95e-189	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
NEKLCKCI_00004	0.0	-	-	-	JKL	-	-	-	helicase superfamily c-terminal domain
NEKLCKCI_00005	1.23e-210	-	-	-	EG	-	-	-	EamA-like transporter family
NEKLCKCI_00006	1.09e-05	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
NEKLCKCI_00007	1.5e-188	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
NEKLCKCI_00008	2.89e-188	-	-	-	S	ko:K07090	-	ko00000	Sulfite exporter TauE/SafE
NEKLCKCI_00010	4.95e-269	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.87
NEKLCKCI_00011	0.0	-	2.5.1.49	-	H	ko:K01740	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 9.98
NEKLCKCI_00012	6.76e-49	-	-	-	C	-	-	-	Aldo/keto reductase family
NEKLCKCI_00013	1.74e-66	-	-	-	EGP	-	-	-	Major facilitator superfamily
NEKLCKCI_00014	8.66e-16	-	-	-	EGP	-	-	-	Major facilitator superfamily
NEKLCKCI_00016	3.68e-229	glkA	2.7.1.2	-	G	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
NEKLCKCI_00017	0.0	-	-	-	S	-	-	-	ATPases associated with a variety of cellular activities
NEKLCKCI_00018	4.9e-76	-	-	-	EGP	ko:K18926	-	ko00000,ko00002,ko02000	Major facilitator Superfamily
NEKLCKCI_00019	5.09e-202	-	-	-	I	-	-	-	alpha/beta hydrolase fold
NEKLCKCI_00020	4.04e-149	-	-	-	S	ko:K07005	-	ko00000	Pyridoxamine 5'-phosphate oxidase
NEKLCKCI_00022	7.29e-65	-	-	-	S	-	-	-	DUF218 domain
NEKLCKCI_00023	1.27e-22	-	-	-	S	-	-	-	Protein of unknown function (DUF979)
NEKLCKCI_00024	3.7e-149	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
NEKLCKCI_00026	4.33e-162	-	-	-	-	-	-	-	-
NEKLCKCI_00027	1.17e-224	-	-	-	M	-	-	-	domain, Protein
NEKLCKCI_00028	8.64e-24	-	-	-	M	-	-	-	domain, Protein
NEKLCKCI_00029	0.0	yjjK	-	-	S	-	-	-	ATP-binding cassette protein, ChvD family
NEKLCKCI_00030	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	hydrolase family 20, catalytic
NEKLCKCI_00031	1.88e-219	tesB	-	-	I	ko:K10805	ko01040,map01040	ko00000,ko00001,ko01000,ko01004	Thioesterase-like superfamily
NEKLCKCI_00032	7.2e-102	-	-	-	S	-	-	-	Protein of unknown function (DUF3180)
NEKLCKCI_00033	0.0	folK	2.7.6.3, 4.1.2.25	-	H	ko:K00950,ko:K13940	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
NEKLCKCI_00034	3.21e-210	folP	2.5.1.15	-	H	ko:K00796	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
NEKLCKCI_00035	2.05e-130	folE	3.5.4.16	-	H	ko:K01495	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	GTP cyclohydrolase
NEKLCKCI_00036	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
NEKLCKCI_00037	2.65e-127	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
NEKLCKCI_00038	9.99e-269	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K00760,ko:K04075	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
NEKLCKCI_00039	0.0	dacB	3.4.16.4	-	M	ko:K07259	ko00550,map00550	ko00000,ko00001,ko01000,ko01002,ko01011	D-Ala-D-Ala carboxypeptidase 3 (S13) family
NEKLCKCI_00040	0.0	-	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
NEKLCKCI_00041	2.64e-214	natA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
NEKLCKCI_00042	3.97e-295	-	-	-	M	-	-	-	Glycosyl transferase family 21
NEKLCKCI_00043	0.0	-	-	-	S	-	-	-	AI-2E family transporter
NEKLCKCI_00044	5.42e-227	-	-	-	M	-	-	-	Glycosyltransferase like family 2
NEKLCKCI_00045	6.04e-271	fucO	1.1.1.77, 1.1.99.37, 1.2.98.1	-	C	ko:K00048,ko:K17067	ko00625,ko00630,ko00640,ko00680,ko01120,ko01200,map00625,map00630,map00640,map00680,map01120,map01200	ko00000,ko00001,ko01000	Iron-containing alcohol dehydrogenase
NEKLCKCI_00046	5.97e-143	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
NEKLCKCI_00049	3.5e-104	-	-	-	S	-	-	-	Domain of unknown function (DUF4190)
NEKLCKCI_00050	2.29e-254	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
NEKLCKCI_00051	9.7e-223	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
NEKLCKCI_00053	2.46e-27	-	-	-	S	-	-	-	Helix-turn-helix domain
NEKLCKCI_00054	8.51e-26	-	-	-	S	ko:K18955	-	ko00000,ko03000	Transcription factor WhiB
NEKLCKCI_00055	0.0	gph	-	-	G	ko:K16209	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
NEKLCKCI_00056	0.0	lacZ6	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.87
NEKLCKCI_00057	1.53e-113	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Amidohydrolase family
NEKLCKCI_00058	2.73e-231	-	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator, LacI family
NEKLCKCI_00059	1.41e-301	-	-	-	T	-	-	-	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NEKLCKCI_00060	5.05e-153	-	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
NEKLCKCI_00061	3.34e-131	-	-	-	-	-	-	-	-
NEKLCKCI_00062	1.15e-55	-	-	-	V	-	-	-	N-Acetylmuramoyl-L-alanine amidase
NEKLCKCI_00063	4.81e-56	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
NEKLCKCI_00064	3.34e-225	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
NEKLCKCI_00065	2.95e-142	cas4	3.1.12.1	-	L	ko:K07464,ko:K15342	-	ko00000,ko01000,ko02048,ko03400	Domain of unknown function DUF83
NEKLCKCI_00066	1.9e-189	-	-	-	L	ko:K19118	-	ko00000,ko02048	CRISPR-associated protein Cas7
NEKLCKCI_00067	1.97e-304	-	-	-	S	-	-	-	CRISPR-associated protein (Cas_Csd1)
NEKLCKCI_00068	4.71e-133	cas5d	-	-	S	ko:K19119	-	ko00000,ko02048	CRISPR-associated protein (Cas_Cas5)
NEKLCKCI_00069	0.0	cas3	-	-	L	ko:K07012	-	ko00000,ko01000,ko02048	DEAD-like helicases superfamily
NEKLCKCI_00070	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
NEKLCKCI_00071	2.38e-73	-	-	-	S	ko:K08972	-	ko00000	Mycobacterial 4 TMS phage holin, superfamily IV
NEKLCKCI_00072	0.0	aldH	1.2.1.3, 1.2.99.10	-	C	ko:K00128,ko:K22445	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldehyde dehydrogenase family
NEKLCKCI_00073	1.77e-178	hflK	-	-	O	-	-	-	prohibitin homologues
NEKLCKCI_00074	4.45e-311	-	2.5.1.49	-	E	ko:K01740	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	Cys/Met metabolism PLP-dependent enzyme
NEKLCKCI_00075	5.45e-299	metC1	4.4.1.8	-	E	ko:K01760	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Cys/Met metabolism PLP-dependent enzyme
NEKLCKCI_00076	0.0	nox	-	-	C	-	-	-	Pyridine nucleotide-disulphide oxidoreductase
NEKLCKCI_00077	1.66e-286	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
NEKLCKCI_00078	6.34e-134	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
NEKLCKCI_00079	0.0	-	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
NEKLCKCI_00080	1.21e-72	-	-	-	K	-	-	-	MerR, DNA binding
NEKLCKCI_00081	1.73e-248	-	-	-	C	ko:K19265	-	ko00000,ko01000	Aldo/keto reductase family
NEKLCKCI_00082	2.92e-131	-	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Exonuclease, DNA polymerase III, epsilon subunit family
NEKLCKCI_00083	0.0	gltA	2.3.3.1	-	C	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Citrate synthase, C-terminal domain
NEKLCKCI_00084	6.17e-192	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine aminopeptidase
NEKLCKCI_00085	2.65e-194	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
NEKLCKCI_00086	0.0	pepO	3.4.24.11, 3.4.24.71	-	O	ko:K01389,ko:K01415,ko:K07386	ko04614,ko04640,ko04974,ko05010,map04614,map04640,map04974,map05010	ko00000,ko00001,ko01000,ko01002,ko04090,ko04147	Peptidase family M13
NEKLCKCI_00087	6.9e-157	ssb2	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Single-strand binding protein family
NEKLCKCI_00088	5.42e-219	-	-	-	-	-	-	-	-
NEKLCKCI_00089	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
NEKLCKCI_00091	0.0	-	-	-	L	-	-	-	PIF1-like helicase
NEKLCKCI_00092	1.58e-202	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
NEKLCKCI_00093	1.91e-156	orn	-	-	L	ko:K13288	ko03008,map03008	ko00000,ko00001,ko01000,ko03009,ko03019	3'-to-5' exoribonuclease specific for small oligoribonucleotides
NEKLCKCI_00094	5.15e-147	-	-	-	KT	ko:K02483	-	ko00000,ko02022	Transcriptional regulatory protein, C terminal
NEKLCKCI_00095	0.0	-	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha-amylase domain
NEKLCKCI_00096	0.0	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
NEKLCKCI_00097	7.46e-261	rfe	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	Glycosyl transferase family 4
NEKLCKCI_00098	7.44e-151	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Belongs to the SUA5 family
NEKLCKCI_00099	1.11e-79	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Bacterial transferase hexapeptide repeat protein
NEKLCKCI_00100	9.44e-234	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
NEKLCKCI_00101	1.17e-246	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
NEKLCKCI_00102	1.85e-48	rpmE	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the 23S rRNA
NEKLCKCI_00104	3.61e-122	-	-	-	K	ko:K13633	-	ko00000,ko03000	helix_turn_helix, arabinose operon control protein
NEKLCKCI_00105	1.45e-86	-	-	-	K	ko:K13633	-	ko00000,ko03000	helix_turn_helix, arabinose operon control protein
NEKLCKCI_00106	2.74e-209	-	-	-	G	ko:K05340	-	ko00000,ko02000	Sugar transport protein
NEKLCKCI_00107	9.51e-240	iolG	1.1.1.18, 1.1.1.369	-	S	ko:K00010	ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130	ko00000,ko00001,ko01000	Oxidoreductase family, C-terminal alpha/beta domain
NEKLCKCI_00108	0.0	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	Mycolic acid cyclopropane synthetase
NEKLCKCI_00109	1.22e-114	-	-	-	-	-	-	-	-
NEKLCKCI_00110	7e-133	tnp3521a2	-	-	L	-	-	-	Integrase core domain
NEKLCKCI_00111	4.14e-193	-	-	-	K	-	-	-	Transposase IS116 IS110 IS902
NEKLCKCI_00112	1.1e-19	-	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score 9.26
NEKLCKCI_00113	1.73e-272	ugd	1.1.1.22	-	M	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	ko00000,ko00001,ko00002,ko01000	UDP binding domain
NEKLCKCI_00114	0.0	-	-	-	M	-	-	-	Glycosyl transferase family 8
NEKLCKCI_00115	4.9e-179	tagG	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	Transport permease protein
NEKLCKCI_00116	7.98e-310	-	-	-	GM	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
NEKLCKCI_00117	0.0	-	-	-	M	-	-	-	hydrolase, family 25
NEKLCKCI_00118	6.7e-158	-	-	-	L	-	-	-	Protein of unknown function (DUF1524)
NEKLCKCI_00119	4.82e-196	-	-	-	M	-	-	-	Putative cell wall binding repeat 2
NEKLCKCI_00120	0.0	-	-	-	L	-	-	-	Transposase
NEKLCKCI_00121	1.7e-162	-	-	-	L	-	-	-	IstB-like ATP binding protein
NEKLCKCI_00122	0.0	-	-	-	M	-	-	-	Belongs to the glycosyl hydrolase 43 family
NEKLCKCI_00123	8.3e-223	-	-	-	M	-	-	-	Glycosyl transferase, family 2
NEKLCKCI_00124	0.0	-	-	-	M	-	-	-	Glycosyl transferase family 8
NEKLCKCI_00125	0.0	-	-	-	-	-	-	-	-
NEKLCKCI_00126	2.23e-152	-	-	-	S	-	-	-	Acyltransferase family
NEKLCKCI_00127	5.6e-140	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
NEKLCKCI_00128	1.41e-232	-	-	-	-	-	-	-	-
NEKLCKCI_00129	2.63e-48	-	-	-	-	-	-	-	-
NEKLCKCI_00130	8.28e-135	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
NEKLCKCI_00131	1.54e-224	-	-	-	L	-	-	-	Replication initiation factor
NEKLCKCI_00132	4.81e-30	-	-	-	S	-	-	-	Excisionase from transposon Tn916
NEKLCKCI_00133	2.48e-217	-	-	-	L	-	-	-	Phage integrase family
NEKLCKCI_00134	8.93e-94	-	-	-	S	-	-	-	Acyltransferase family
NEKLCKCI_00135	4.11e-90	-	-	-	L	ko:K07485	-	ko00000	Transposase
NEKLCKCI_00136	1.47e-243	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
NEKLCKCI_00137	6.23e-102	ulaC	2.7.1.194	-	G	ko:K02821	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
NEKLCKCI_00138	1.49e-54	-	2.7.1.194	-	G	ko:K02822	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
NEKLCKCI_00139	0.0	ulaA	-	-	S	ko:K03475	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
NEKLCKCI_00140	3.08e-177	-	-	-	S	ko:K07043	-	ko00000	Protein of unknown function DUF45
NEKLCKCI_00141	2.68e-110	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
NEKLCKCI_00142	2.83e-240	-	-	-	EG	-	-	-	EamA-like transporter family
NEKLCKCI_00143	1.37e-305	-	-	-	P	ko:K03699	-	ko00000,ko02042	Transporter associated domain
NEKLCKCI_00144	1.14e-122	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
NEKLCKCI_00145	6.08e-154	cah	4.2.1.1	-	P	ko:K01673	ko00910,map00910	ko00000,ko00001,ko01000	Reversible hydration of carbon dioxide
NEKLCKCI_00146	1.01e-137	ahpC	1.11.1.15	-	O	ko:K03386	ko04214,map04214	ko00000,ko00001,ko01000,ko04147	C-terminal domain of 1-Cys peroxiredoxin
NEKLCKCI_00147	0.0	-	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Thioredoxin domain
NEKLCKCI_00148	0.0	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
NEKLCKCI_00149	1.95e-308	-	-	-	EGP	ko:K08177	-	ko00000,ko02000	Major Facilitator Superfamily
NEKLCKCI_00150	0.0	ppc	4.1.1.31	-	H	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
NEKLCKCI_00151	0.0	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
NEKLCKCI_00152	5.14e-226	-	-	-	S	-	-	-	Amidohydrolase family
NEKLCKCI_00153	4.09e-249	-	-	-	S	-	-	-	Protein conserved in bacteria
NEKLCKCI_00154	1.2e-261	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
NEKLCKCI_00155	5.42e-67	-	-	-	S	-	-	-	Protein of unknown function (DUF3073)
NEKLCKCI_00156	2.63e-116	-	-	-	K	-	-	-	LytTr DNA-binding domain
NEKLCKCI_00157	2.12e-102	-	-	-	T	-	-	-	protein histidine kinase activity
NEKLCKCI_00158	5.04e-260	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
NEKLCKCI_00159	4.72e-38	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
NEKLCKCI_00160	0.0	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
NEKLCKCI_00161	4.37e-213	-	-	-	M	-	-	-	Glycosyl transferase family 2
NEKLCKCI_00163	0.0	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	Alpha-L-fucosidase
NEKLCKCI_00164	6.77e-26	-	-	-	EH	-	-	-	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NEKLCKCI_00165	8.85e-243	-	-	-	K	-	-	-	Periplasmic binding protein domain
NEKLCKCI_00166	4.92e-159	-	-	-	G	ko:K02026	-	ko00000,ko00002,ko02000	ABC transporter permease
NEKLCKCI_00167	0.0	bga1	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.87
NEKLCKCI_00168	1.13e-82	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	carbohydrate transport
NEKLCKCI_00169	0.0	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
NEKLCKCI_00170	2.65e-184	coaX	2.7.1.33	-	H	ko:K03525	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
NEKLCKCI_00171	0.0	-	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substrate-binding protein, family 5
NEKLCKCI_00172	6.69e-216	-	-	-	P	ko:K02033	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
NEKLCKCI_00173	8.32e-207	-	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
NEKLCKCI_00174	1.61e-182	-	-	-	EP	ko:K02031	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	oligopeptide transport protein of the ABC superfamily, ATP-binding component
NEKLCKCI_00175	1.57e-199	-	-	-	E	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
NEKLCKCI_00176	1.71e-238	pdxB	-	-	EH	-	-	-	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NEKLCKCI_00177	2e-41	-	-	-	-	-	-	-	-
NEKLCKCI_00178	7.41e-198	-	-	-	S	-	-	-	Domain of unknown function (DUF4357)
NEKLCKCI_00179	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	modification (methylase) protein of type I restriction-modification system K03427
NEKLCKCI_00181	3.21e-157	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
NEKLCKCI_00182	0.0	-	-	-	L	-	-	-	PFAM Integrase catalytic
NEKLCKCI_00183	4.85e-185	istB	-	-	L	-	-	-	IstB-like ATP binding protein
NEKLCKCI_00184	4.22e-206	-	2.7.1.95	-	F	ko:K00897	-	ko00000,ko01000,ko01504	Phosphotransferase enzyme family
NEKLCKCI_00185	7.67e-91	-	-	-	L	ko:K07493	-	ko00000	PFAM Transposase, Mutator family
NEKLCKCI_00186	2.92e-137	-	-	-	L	ko:K07483	-	ko00000	Integrase core domain
NEKLCKCI_00187	4.31e-129	-	-	-	K	-	-	-	cell envelope-related transcriptional attenuator
NEKLCKCI_00188	1.83e-304	-	-	-	-	-	-	-	-
NEKLCKCI_00189	1.44e-229	-	-	-	S	ko:K21688	-	ko00000	G5
NEKLCKCI_00190	2.57e-78	trxA	1.8.1.9	-	O	ko:K00384,ko:K03671	ko00450,ko04621,ko05418,map00450,map04621,map05418	ko00000,ko00001,ko01000,ko03110	Belongs to the thioredoxin family
NEKLCKCI_00191	6.71e-153	-	-	-	F	-	-	-	Domain of unknown function (DUF4916)
NEKLCKCI_00192	5.71e-203	-	-	-	I	-	-	-	Alpha/beta hydrolase family
NEKLCKCI_00193	7.82e-264	nudC	3.6.1.22	-	L	ko:K03426	ko00760,ko01100,ko04146,map00760,map01100,map04146	ko00000,ko00001,ko01000	NADH pyrophosphatase zinc ribbon domain
NEKLCKCI_00194	0.0	-	-	-	S	-	-	-	L,D-transpeptidase catalytic domain
NEKLCKCI_00195	2.17e-93	gcvH	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
NEKLCKCI_00196	0.0	-	-	-	S	-	-	-	Uncharacterized conserved protein (DUF2183)
NEKLCKCI_00197	0.0	ptrB	3.4.21.83	-	E	ko:K01354	ko05142,ko05143,map05142,map05143	ko00000,ko00001,ko01000,ko01002	Peptidase, S9A B C family, catalytic domain protein
NEKLCKCI_00198	3.62e-245	leuB	1.1.1.85	-	CE	ko:K00052	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
NEKLCKCI_00199	4.93e-151	lplA	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Biotin/lipoate A/B protein ligase family
NEKLCKCI_00200	4.67e-173	crp	-	-	K	ko:K10914	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	helix_turn_helix, cAMP Regulatory protein
NEKLCKCI_00201	0.0	pon1	-	-	M	-	-	-	Transglycosylase
NEKLCKCI_00202	8.66e-277	namA	-	-	C	-	-	-	NADH:flavin oxidoreductase / NADH oxidase family
NEKLCKCI_00203	4.9e-288	pyrD	1.3.5.2, 1.3.98.1	-	F	ko:K00226,ko:K00254	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
NEKLCKCI_00204	1.2e-179	-	-	-	K	-	-	-	DeoR C terminal sensor domain
NEKLCKCI_00205	0.0	galT	2.7.7.12	-	C	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	Galactose-1-phosphate uridyl transferase, N-terminal domain
NEKLCKCI_00206	2.4e-296	galK	2.7.1.6, 2.7.7.12	-	G	ko:K00849,ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GHMP kinase family. GalK subfamily
NEKLCKCI_00207	1.32e-308	-	-	-	EGP	-	-	-	Sugar (and other) transporter
NEKLCKCI_00208	3.23e-58	-	-	-	T	ko:K07166	-	ko00000	Belongs to the UPF0237 family
NEKLCKCI_00209	0.0	-	-	-	S	ko:K09157	-	ko00000	UPF0210 protein
NEKLCKCI_00210	1.62e-93	-	-	-	-	-	-	-	-
NEKLCKCI_00212	9.1e-157	spoU	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
NEKLCKCI_00213	2.66e-09	exsH	3.2.1.178, 3.2.1.18, 3.2.1.52	GH16,GH20,GH33	G	ko:K01186,ko:K12373,ko:K20830	ko00511,ko00513,ko00520,ko00531,ko00600,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00600,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko02042,ko03110	xyloglucan:xyloglucosyl transferase activity
NEKLCKCI_00214	6.87e-60	-	3.2.1.35	-	G	ko:K01197	ko00531,ko01100,map00531,map01100	ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042	Putative cell wall binding repeat
NEKLCKCI_00215	3.13e-237	mutY	-	-	L	ko:K03575	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	FES
NEKLCKCI_00216	1.31e-142	-	-	-	-	-	-	-	-
NEKLCKCI_00217	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NEKLCKCI_00218	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NEKLCKCI_00219	2.66e-124	-	-	-	T	-	-	-	Forkhead associated domain
NEKLCKCI_00220	1.64e-55	-	-	-	B	-	-	-	Belongs to the OprB family
NEKLCKCI_00221	5.53e-210	-	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	Sigma factor PP2C-like phosphatases
NEKLCKCI_00222	0.0	-	-	-	E	-	-	-	Transglutaminase-like superfamily
NEKLCKCI_00223	2.24e-299	-	-	-	S	-	-	-	Protein of unknown function DUF58
NEKLCKCI_00224	0.0	-	-	-	S	ko:K03924	-	ko00000,ko01000	ATPase family associated with various cellular activities (AAA)
NEKLCKCI_00225	0.0	-	-	-	S	-	-	-	Fibronectin type 3 domain
NEKLCKCI_00226	0.0	pknK	2.7.11.1	-	KLT	ko:K12132	-	ko00000,ko01000,ko01001	Protein tyrosine kinase
NEKLCKCI_00227	0.0	-	-	-	L	-	-	-	PD-(D/E)XK nuclease superfamily
NEKLCKCI_00228	0.0	uvrD2	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	Belongs to the helicase family. UvrD subfamily
NEKLCKCI_00229	9.73e-195	-	-	-	K	-	-	-	-acetyltransferase
NEKLCKCI_00230	0.0	-	-	-	G	-	-	-	Major Facilitator Superfamily
NEKLCKCI_00231	3.22e-33	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
NEKLCKCI_00232	5.9e-76	-	-	-	L	-	-	-	Transposase
NEKLCKCI_00233	1.16e-169	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
NEKLCKCI_00234	6.97e-208	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NEKLCKCI_00235	0.0	rnj	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
NEKLCKCI_00236	0.0	pepN	3.4.11.2	-	E	ko:K01256,ko:K08776	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	Peptidase family M1 domain
NEKLCKCI_00237	1.89e-313	vpr	-	-	O	-	-	-	Subtilase family
NEKLCKCI_00238	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NEKLCKCI_00239	1.58e-160	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
NEKLCKCI_00240	0.0	-	-	-	S	-	-	-	zinc finger
NEKLCKCI_00241	1.95e-140	vsr	-	-	L	ko:K07458	-	ko00000,ko01000,ko03400	May nick specific sequences that contain T G mispairs resulting from m5C-deamination
NEKLCKCI_00242	3.64e-291	aspB	2.6.1.1	-	E	ko:K00812	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase class-V
NEKLCKCI_00243	2.21e-47	ppx1	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	Ppx/GppA phosphatase family
NEKLCKCI_00244	3.94e-170	tmp1	-	-	S	-	-	-	Domain of unknown function (DUF4391)
NEKLCKCI_00245	8.74e-193	thiF	2.7.7.73, 2.7.7.80, 2.8.1.11	-	H	ko:K03148,ko:K21147	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000	ThiF family
NEKLCKCI_00246	0.0	-	-	-	OP	-	-	-	Sulfurtransferase TusA
NEKLCKCI_00247	9.54e-234	-	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Inosine-uridine preferring nucleoside hydrolase
NEKLCKCI_00248	4.35e-05	malR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
NEKLCKCI_00250	2.98e-219	-	-	-	S	ko:K18353	ko01502,ko02020,map01502,map02020	ko00000,ko00001,ko00002,ko01504	Endonuclease/Exonuclease/phosphatase family
NEKLCKCI_00251	1.47e-56	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
NEKLCKCI_00252	0.0	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
NEKLCKCI_00253	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Anaerobic ribonucleoside-triphosphate reductase
NEKLCKCI_00254	3.42e-178	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NEKLCKCI_00256	0.0	hgdC	-	-	I	-	-	-	CoA enzyme activase uncharacterised domain (DUF2229)
NEKLCKCI_00257	3.9e-213	-	-	-	-	-	-	-	-
NEKLCKCI_00258	0.0	egtA	6.3.2.2	-	H	ko:K01919	ko00270,ko00480,ko01100,map00270,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Glutamate-cysteine ligase family 2(GCS2)
NEKLCKCI_00262	3.53e-119	-	-	-	M	-	-	-	Parallel beta-helix repeats
NEKLCKCI_00264	4.46e-118	-	-	-	K	-	-	-	MarR family
NEKLCKCI_00265	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter, ATP-binding protein
NEKLCKCI_00266	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter transmembrane region
NEKLCKCI_00267	2.26e-220	-	-	-	S	-	-	-	Patatin-like phospholipase
NEKLCKCI_00268	2.24e-195	murI	5.1.1.3	-	M	ko:K01776	ko00471,ko01100,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
NEKLCKCI_00269	7.32e-216	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
NEKLCKCI_00270	4.82e-147	-	-	-	S	-	-	-	Vitamin K epoxide reductase
NEKLCKCI_00271	2.09e-212	PPA1328	3.1.3.97, 3.1.4.57	-	S	ko:K07053,ko:K20859	ko00440,map00440	ko00000,ko00001,ko01000	DNA polymerase alpha chain like domain
NEKLCKCI_00272	9.31e-44	-	-	-	S	-	-	-	Protein of unknown function (DUF3107)
NEKLCKCI_00273	0.0	mphA	-	-	S	-	-	-	Aminoglycoside phosphotransferase
NEKLCKCI_00274	0.0	uvrD2	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
NEKLCKCI_00275	0.0	-	-	-	S	-	-	-	Zincin-like metallopeptidase
NEKLCKCI_00276	2.91e-193	sdrC	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
NEKLCKCI_00277	2.24e-86	-	-	-	S	-	-	-	Protein of unknown function (DUF3052)
NEKLCKCI_00278	3.24e-247	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
NEKLCKCI_00279	2.08e-79	-	-	-	S	-	-	-	Thiamine-binding protein
NEKLCKCI_00280	7.27e-211	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
NEKLCKCI_00281	3.43e-291	-	-	-	O	ko:K13525	ko04141,ko05134,map04141,map05134	ko00000,ko00001,ko00002,ko03019,ko04131,ko04147	AAA domain (Cdc48 subfamily)
NEKLCKCI_00282	1.62e-110	-	-	-	-	-	-	-	-
NEKLCKCI_00283	0.0	thiC	4.1.99.17	-	H	ko:K03147	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
NEKLCKCI_00284	1.5e-203	thiM	2.7.1.50	-	H	ko:K00878	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
NEKLCKCI_00285	0.0	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Domain of unknown function (DUF4982)
NEKLCKCI_00286	0.0	glyQS	6.1.1.14	-	J	ko:K01880	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of glycine to tRNA(Gly)
NEKLCKCI_00287	4.69e-314	dus	-	-	J	-	-	-	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NEKLCKCI_00288	8.03e-295	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
NEKLCKCI_00289	9.4e-105	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
NEKLCKCI_00290	1.35e-56	-	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
NEKLCKCI_00291	1.65e-191	-	-	-	V	-	-	-	DivIVA protein
NEKLCKCI_00292	4.6e-148	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
NEKLCKCI_00293	1.89e-225	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
NEKLCKCI_00295	1.25e-82	-	-	-	-	-	-	-	-
NEKLCKCI_00296	3.72e-220	dapD	2.3.1.117	-	E	ko:K00674	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
NEKLCKCI_00297	5.51e-263	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
NEKLCKCI_00298	3.39e-298	ftsE	-	-	D	ko:K09812	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03036	Cell division ATP-binding protein FtsE
NEKLCKCI_00299	4.29e-203	ftsX	-	-	D	ko:K09811	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03036	Part of the ABC transporter FtsEX involved in cellular division
NEKLCKCI_00300	2.15e-284	-	-	-	D	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	CHAP domain protein
NEKLCKCI_00301	1.38e-103	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
NEKLCKCI_00302	1.06e-185	-	5.4.99.28, 5.4.99.29	-	J	ko:K06177	-	ko00000,ko01000,ko03009,ko03016	RNA pseudouridylate synthase
NEKLCKCI_00303	4.66e-61	-	-	-	-	-	-	-	-
NEKLCKCI_00304	1.42e-31	-	-	-	-	-	-	-	-
NEKLCKCI_00305	9.38e-13	-	-	-	-	-	-	-	-
NEKLCKCI_00306	3.79e-16	-	-	-	L	-	-	-	PFAM Integrase catalytic
NEKLCKCI_00308	7.14e-316	-	-	-	NU	-	-	-	Tfp pilus assembly protein FimV
NEKLCKCI_00309	2.16e-282	dxr	1.1.1.267	-	I	ko:K00099	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
NEKLCKCI_00310	9.79e-299	ispG	1.17.7.1, 1.17.7.3	-	I	ko:K03526	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
NEKLCKCI_00311	0.0	-	-	-	I	-	-	-	acetylesterase activity
NEKLCKCI_00312	4.82e-181	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
NEKLCKCI_00313	2.53e-198	uppS	2.5.1.31, 2.5.1.86, 2.5.1.88	-	H	ko:K00806,ko:K14215,ko:K21273	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
NEKLCKCI_00314	1.65e-245	-	-	-	S	-	-	-	Domain of unknown function (DUF1963)
NEKLCKCI_00315	1.2e-19	fosC	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 32 family
NEKLCKCI_00316	1.85e-52	cscA	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 32 family
NEKLCKCI_00317	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III alpha subunit
NEKLCKCI_00318	2.09e-151	-	-	-	S	-	-	-	zinc-ribbon domain
NEKLCKCI_00319	1.9e-62	-	-	-	J	ko:K07574	-	ko00000,ko03009	CRS1_YhbY
NEKLCKCI_00320	0.0	-	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	MCRA family
NEKLCKCI_00322	2.5e-258	-	-	-	K	-	-	-	WYL domain
NEKLCKCI_00323	5.5e-199	-	-	-	S	-	-	-	Aldo/keto reductase family
NEKLCKCI_00324	2.11e-221	dkgV	-	-	C	-	-	-	Aldo/keto reductase family
NEKLCKCI_00325	1.5e-100	-	-	-	S	-	-	-	Domain of unknown function (DUF4186)
NEKLCKCI_00328	2.68e-232	-	-	-	S	-	-	-	Protein conserved in bacteria
NEKLCKCI_00329	0.0	hisD	1.1.1.23	-	E	ko:K00013	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
NEKLCKCI_00330	8.79e-284	hisC	2.6.1.9	-	E	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
NEKLCKCI_00331	1.08e-145	hisB	3.1.3.15, 4.2.1.19	-	E	ko:K01089,ko:K01693	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Imidazoleglycerol-phosphate dehydratase
NEKLCKCI_00332	5.28e-151	-	-	-	-	-	-	-	-
NEKLCKCI_00333	1.35e-156	hisH	-	-	E	ko:K02501	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
NEKLCKCI_00334	4.81e-167	hisA	5.3.1.16, 5.3.1.24	-	E	ko:K01814,ko:K01817	ko00340,ko00400,ko01100,ko01110,ko01130,ko01230,map00340,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Histidine biosynthesis protein
NEKLCKCI_00335	4.51e-225	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2252)
NEKLCKCI_00336	0.0	glnA2	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
NEKLCKCI_00337	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF5067)
NEKLCKCI_00339	9.48e-239	-	-	-	M	-	-	-	Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
NEKLCKCI_00340	0.0	hrpA	3.6.4.13	-	L	ko:K03578	-	ko00000,ko01000	Helicase associated domain (HA2) Add an annotation
NEKLCKCI_00341	4.17e-156	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase (PrmA)
NEKLCKCI_00342	7.04e-217	-	-	-	-	-	-	-	-
NEKLCKCI_00343	0.0	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
NEKLCKCI_00344	1.61e-225	ldh	1.1.1.27, 1.1.1.37	-	C	ko:K00016,ko:K00024	ko00010,ko00020,ko00270,ko00620,ko00630,ko00640,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04922,map00010,map00020,map00270,map00620,map00630,map00640,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200,map04922	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
NEKLCKCI_00345	3.88e-213	czcD	-	-	P	ko:K16264	-	ko00000,ko02000	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
NEKLCKCI_00346	3.03e-166	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
NEKLCKCI_00347	8.05e-64	-	-	-	M	-	-	-	Lysin motif
NEKLCKCI_00348	2.55e-107	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
NEKLCKCI_00349	1.31e-289	serA	1.1.1.399, 1.1.1.95	-	EH	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
NEKLCKCI_00350	0.0	-	-	-	L	-	-	-	DNA helicase
NEKLCKCI_00351	8.85e-118	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
NEKLCKCI_00352	1.25e-245	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
NEKLCKCI_00353	2.29e-96	-	-	-	D	-	-	-	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
NEKLCKCI_00354	0.0	ftsI	3.4.16.4	-	M	ko:K03587	ko00550,ko01501,map00550,map01501	ko00000,ko00001,ko01000,ko01011,ko03036	Penicillin-binding protein, transpeptidase domain protein
NEKLCKCI_00355	2.48e-231	-	-	-	M	-	-	-	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
NEKLCKCI_00356	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
NEKLCKCI_00357	8.76e-261	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NEKLCKCI_00358	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
NEKLCKCI_00359	4.49e-297	ftsW	2.4.1.227	GT28	D	ko:K02563,ko:K03588	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011,ko02000,ko03036	Belongs to the SEDS family
NEKLCKCI_00360	1.1e-276	murG	2.4.1.227, 6.3.2.8	GT28	M	ko:K01924,ko:K02563	ko00471,ko00550,ko01100,ko01502,ko04112,map00471,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
NEKLCKCI_00361	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
NEKLCKCI_00362	1.24e-233	ftsQ	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein FtsQ
NEKLCKCI_00365	2.9e-109	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
NEKLCKCI_00366	3.73e-301	-	-	-	G	-	-	-	Major Facilitator Superfamily
NEKLCKCI_00367	2.87e-217	-	2.7.1.4	-	G	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	pfkB family carbohydrate kinase
NEKLCKCI_00368	5.33e-286	-	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
NEKLCKCI_00369	1.98e-168	cutC	-	-	P	ko:K06201	-	ko00000	Participates in the control of copper homeostasis
NEKLCKCI_00370	5.86e-276	-	-	-	GK	-	-	-	ROK family
NEKLCKCI_00371	5.93e-196	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
NEKLCKCI_00372	4.41e-309	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Amidohydrolase family
NEKLCKCI_00373	0.0	-	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
NEKLCKCI_00374	5.3e-243	dppB	-	-	EP	ko:K02033	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
NEKLCKCI_00375	3.74e-249	dppC	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
NEKLCKCI_00376	0.0	-	-	-	P	ko:K02031,ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
NEKLCKCI_00377	0.0	pepP	3.4.11.9	-	E	ko:K01262	-	ko00000,ko01000,ko01002	Aminopeptidase P, N-terminal domain
NEKLCKCI_00378	4.35e-125	-	-	-	F	-	-	-	NUDIX domain
NEKLCKCI_00380	0.0	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Mur ligase middle domain
NEKLCKCI_00381	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
NEKLCKCI_00382	1.46e-165	-	5.1.1.13	-	G	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
NEKLCKCI_00383	4.4e-310	-	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp
NEKLCKCI_00384	9.68e-293	-	2.6.1.33	-	M	ko:K20429	-	ko00000,ko01000	DegT/DnrJ/EryC1/StrS aminotransferase family
NEKLCKCI_00385	2.97e-243	-	-	-	V	-	-	-	Acetyltransferase (GNAT) domain
NEKLCKCI_00386	0.0	murE	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
NEKLCKCI_00387	9.94e-149	sigH	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
NEKLCKCI_00388	3.35e-84	-	-	-	-	-	-	-	-
NEKLCKCI_00389	7.58e-248	-	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
NEKLCKCI_00390	1.13e-231	ispH	1.17.7.4	-	IM	ko:K03527	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
NEKLCKCI_00392	1.74e-118	ybaK	-	-	J	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
NEKLCKCI_00393	2.39e-254	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
NEKLCKCI_00394	6.87e-172	-	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Thiamin pyrophosphokinase, vitamin B1 binding domain
NEKLCKCI_00395	5.96e-09	-	-	-	S	-	-	-	Spermine/spermidine synthase domain
NEKLCKCI_00396	3.07e-137	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
NEKLCKCI_00397	3.31e-35	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L35
NEKLCKCI_00398	5.46e-81	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
NEKLCKCI_00399	3.26e-226	xerD	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	recombinase XerD
NEKLCKCI_00400	1.86e-194	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	CobQ CobB MinD ParA nucleotide binding domain protein
NEKLCKCI_00401	2.05e-194	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
NEKLCKCI_00402	6.34e-147	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
NEKLCKCI_00403	5.17e-192	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX hydrolase
NEKLCKCI_00404	0.0	nadA	2.5.1.72	-	H	ko:K03517	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
NEKLCKCI_00405	0.0	nadB	1.4.3.16, 2.4.2.19	-	H	ko:K00278,ko:K00767	ko00250,ko00760,ko01100,map00250,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of L-aspartate to iminoaspartate
NEKLCKCI_00406	3.33e-211	nadC	2.4.2.19	-	H	ko:K00767	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Quinolinate phosphoribosyl transferase, N-terminal domain
NEKLCKCI_00407	8.76e-299	iscS1	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class-V
NEKLCKCI_00408	0.0	typA	-	-	T	ko:K06207	-	ko00000	Elongation factor G C-terminus
NEKLCKCI_00409	1.29e-109	-	-	-	-	-	-	-	-
NEKLCKCI_00410	3.53e-254	pheA	4.2.1.51, 5.4.99.5	-	E	ko:K04518,ko:K14170	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Prephenate dehydratase
NEKLCKCI_00411	4.23e-245	tyrA	1.3.1.12	-	E	ko:K00210,ko:K04517	ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Prephenate dehydrogenase
NEKLCKCI_00412	2.67e-56	-	-	-	-	-	-	-	-
NEKLCKCI_00413	3.89e-235	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Belongs to the 'phage' integrase family. XerC subfamily
NEKLCKCI_00414	4.8e-226	oppB1	-	-	EP	ko:K02033	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
NEKLCKCI_00415	5.29e-212	oppC	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	N-terminal TM domain of oligopeptide transport permease C
NEKLCKCI_00416	0.0	oppD	-	-	P	ko:K02031,ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
NEKLCKCI_00417	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
NEKLCKCI_00418	0.0	-	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
NEKLCKCI_00419	2.02e-215	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Endonuclease/Exonuclease/phosphatase family
NEKLCKCI_00420	2.66e-196	-	-	-	S	-	-	-	Protein of unknown function (DUF3710)
NEKLCKCI_00421	5.36e-172	-	-	-	S	-	-	-	Protein of unknown function (DUF3159)
NEKLCKCI_00422	3.07e-312	rumA	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NEKLCKCI_00423	7.81e-141	-	-	-	-	-	-	-	-
NEKLCKCI_00424	0.0	ctpE	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
NEKLCKCI_00425	0.0	acnA	4.2.1.3	-	C	ko:K01681	ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
NEKLCKCI_00427	2.59e-212	-	-	-	S	-	-	-	Protein conserved in bacteria
NEKLCKCI_00428	0.0	ilvD	4.2.1.9	-	H	ko:K01687	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the IlvD Edd family
NEKLCKCI_00429	9.87e-70	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
NEKLCKCI_00430	7.86e-285	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
NEKLCKCI_00431	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
NEKLCKCI_00432	3.86e-174	-	3.8.1.2	-	S	ko:K01560,ko:K07025	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
NEKLCKCI_00433	1.29e-233	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
NEKLCKCI_00434	1.56e-177	serB	3.1.3.3	-	E	ko:K01079	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko01009	haloacid dehalogenase-like hydrolase
NEKLCKCI_00436	0.0	arc	-	-	O	ko:K13527	ko03050,map03050	ko00000,ko00001,ko00002,ko03051	AAA ATPase forming ring-shaped complexes
NEKLCKCI_00437	0.0	dop	3.5.1.119	-	S	ko:K20814	-	ko00000,ko01000,ko03051	Pup-ligase protein
NEKLCKCI_00438	3.75e-207	-	3.1.3.25	-	G	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	ko00000,ko00001,ko00002,ko01000	Inositol monophosphatase family
NEKLCKCI_00439	3.51e-27	pup	-	-	S	ko:K13570	-	ko00000,ko04121	Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation
NEKLCKCI_00440	0.0	pafA	6.3.1.19	-	O	ko:K13571	-	ko00000,ko00002,ko01000,ko03051	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
NEKLCKCI_00441	4.7e-57	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Belongs to the bacterial histone-like protein family
NEKLCKCI_00442	0.0	-	-	-	S	-	-	-	Lysylphosphatidylglycerol synthase TM region
NEKLCKCI_00443	0.0	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Adenylosuccinate lyase C-terminal
NEKLCKCI_00444	0.0	-	-	-	S	-	-	-	PGAP1-like protein
NEKLCKCI_00446	9.23e-117	-	-	-	-	-	-	-	-
NEKLCKCI_00447	4.7e-197	-	-	-	S	ko:K07114	-	ko00000,ko02000	von Willebrand factor (vWF) type A domain
NEKLCKCI_00448	3.22e-246	-	-	-	S	ko:K07114	-	ko00000,ko02000	von Willebrand factor (vWF) type A domain
NEKLCKCI_00449	1.78e-121	-	-	-	-	-	-	-	-
NEKLCKCI_00450	5.41e-227	-	-	-	S	-	-	-	Protein of unknown function DUF58
NEKLCKCI_00451	1.22e-251	moxR	-	-	S	ko:K03924	-	ko00000,ko01000	ATPase family associated with various cellular activities (AAA)
NEKLCKCI_00452	7.48e-185	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
NEKLCKCI_00453	4.24e-105	-	-	-	S	-	-	-	LytR cell envelope-related transcriptional attenuator
NEKLCKCI_00454	1.49e-58	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
NEKLCKCI_00455	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
NEKLCKCI_00456	8.25e-53	-	-	-	S	-	-	-	Proteins of 100 residues with WXG
NEKLCKCI_00457	8.57e-226	-	-	-	-	-	-	-	-
NEKLCKCI_00458	1.23e-171	phoP	-	-	KT	ko:K02483	-	ko00000,ko02022	Response regulator receiver domain protein
NEKLCKCI_00459	0.0	phoR	2.7.13.3	-	T	ko:K02484	-	ko00000,ko01000,ko01001,ko02022	ATPase histidine kinase DNA gyrase B HSP90 domain protein
NEKLCKCI_00460	1.23e-87	cspB	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
NEKLCKCI_00461	1.05e-251	-	-	-	S	-	-	-	Protein of unknown function (DUF3027)
NEKLCKCI_00462	4.88e-235	uspA	-	-	T	-	-	-	Belongs to the universal stress protein A family
NEKLCKCI_00463	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	ATPase family associated with various cellular activities (AAA)
NEKLCKCI_00467	5.26e-302	-	-	-	S	-	-	-	Domain of Unknown Function (DUF349)
NEKLCKCI_00468	0.0	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Histidyl-tRNA synthetase
NEKLCKCI_00469	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
NEKLCKCI_00470	5.49e-108	-	-	-	K	-	-	-	helix_turn_helix, Lux Regulon
NEKLCKCI_00471	5.55e-121	-	-	-	S	-	-	-	Aminoacyl-tRNA editing domain
NEKLCKCI_00472	2.08e-180	gluA	-	-	E	ko:K10008	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding protein of ABC transporter for glutamate K02028
NEKLCKCI_00473	5.91e-196	gluB	-	-	ET	ko:K10005	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 3 family
NEKLCKCI_00474	2.97e-144	gluC	-	-	E	ko:K10006	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
NEKLCKCI_00475	6.57e-253	gluD	-	-	E	ko:K10007	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
NEKLCKCI_00476	8.33e-254	-	-	-	S	-	-	-	Polyphosphate kinase 2 (PPK2)
NEKLCKCI_00477	0.0	-	-	-	L	-	-	-	DEAD DEAH box helicase
NEKLCKCI_00478	0.0	rarA	-	-	L	ko:K07478	-	ko00000	Recombination factor protein RarA
NEKLCKCI_00480	0.0	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
NEKLCKCI_00481	0.0	-	-	-	GP	ko:K16785,ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
NEKLCKCI_00482	3.98e-135	-	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
NEKLCKCI_00483	5.64e-179	ppgK	2.7.1.2, 2.7.1.63	-	GK	ko:K00845,ko:K00886	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
NEKLCKCI_00484	3.37e-270	-	-	-	E	-	-	-	Aminotransferase class I and II
NEKLCKCI_00485	3.64e-177	-	-	-	P	ko:K16784	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
NEKLCKCI_00486	6.99e-92	-	2.8.2.22	-	S	ko:K01023	-	ko00000,ko01000	Arylsulfotransferase Ig-like domain
NEKLCKCI_00487	0.0	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
NEKLCKCI_00488	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat
NEKLCKCI_00489	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
NEKLCKCI_00490	1.94e-267	mrp	-	-	D	ko:K03593	-	ko00000,ko03029,ko03036	Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
NEKLCKCI_00491	1.73e-204	-	-	-	S	-	-	-	Protein conserved in bacteria
NEKLCKCI_00492	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
NEKLCKCI_00493	5.21e-183	-	-	-	S	-	-	-	Domain of unknown function (DUF4191)
NEKLCKCI_00494	0.0	lpdA	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NEKLCKCI_00495	1.7e-133	-	-	-	S	-	-	-	Protein of unknown function (DUF3043)
NEKLCKCI_00496	0.0	argE	-	-	E	-	-	-	Peptidase dimerisation domain
NEKLCKCI_00497	5.31e-245	-	-	-	V	-	-	-	N-Acetylmuramoyl-L-alanine amidase
NEKLCKCI_00498	3.58e-196	-	-	-	V	ko:K02003,ko:K09810	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
NEKLCKCI_00499	4.13e-255	-	-	-	-	-	-	-	-
NEKLCKCI_00500	5.1e-300	-	3.2.1.52	-	G	ko:K01207	ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501	ko00000,ko00001,ko00002,ko01000	Glycosyl hydrolase family 3 N-terminal domain protein
NEKLCKCI_00501	0.0	-	-	-	S	ko:K09118	-	ko00000	Uncharacterised protein family (UPF0182)
NEKLCKCI_00502	1.18e-272	-	2.7.8.14, 2.7.8.47	-	M	ko:K18704	-	ko00000,ko01000	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
NEKLCKCI_00503	0.0	-	2.7.8.14, 2.7.8.47	-	M	ko:K18704	-	ko00000,ko01000	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
NEKLCKCI_00504	1.1e-279	-	-	-	I	ko:K13663	-	ko00000,ko01000	transferase activity, transferring acyl groups other than amino-acyl groups
NEKLCKCI_00507	2.58e-165	ispD	2.7.7.60	-	I	ko:K00991	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
NEKLCKCI_00508	3.47e-252	-	-	-	GM	-	-	-	GDP-mannose 4,6 dehydratase
NEKLCKCI_00509	1.2e-194	-	-	-	GM	ko:K09692	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-2 type transporter
NEKLCKCI_00510	1.97e-186	rfbB2	3.6.3.40	-	GM	ko:K01990,ko:K09691,ko:K09693	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
NEKLCKCI_00511	9.1e-127	-	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	Acetyltransferase (GNAT) domain
NEKLCKCI_00512	3.48e-146	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
NEKLCKCI_00513	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
NEKLCKCI_00514	0.0	pabB	2.6.1.85, 4.1.3.27, 4.1.3.38	-	EH	ko:K01657,ko:K01665,ko:K03342,ko:K13950	ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000,ko01007	chorismate binding enzyme
NEKLCKCI_00515	2.04e-194	pabC	2.6.1.42, 2.6.1.85, 4.1.3.38	-	E	ko:K00826,ko:K01665,ko:K02619,ko:K03342	ko00270,ko00280,ko00290,ko00770,ko00790,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map00790,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	branched-chain-amino-acid transaminase activity
NEKLCKCI_00516	7.41e-315	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
NEKLCKCI_00517	3.44e-130	-	-	-	D	-	-	-	Septum formation initiator
NEKLCKCI_00518	8.88e-138	-	-	-	S	ko:K09009	-	ko00000	Protein of unknown function (DUF501)
NEKLCKCI_00519	1.69e-233	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	Ppx/GppA phosphatase family
NEKLCKCI_00521	4.4e-126	-	-	-	-	-	-	-	-
NEKLCKCI_00522	0.0	sdaA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase alpha chain
NEKLCKCI_00523	8.53e-95	fkbP	5.2.1.8	-	G	ko:K01802	-	ko00000,ko01000	Peptidyl-prolyl cis-trans
NEKLCKCI_00524	1.38e-103	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
NEKLCKCI_00526	5.14e-137	-	-	-	-	-	-	-	-
NEKLCKCI_00527	1.95e-193	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	Haemolysin-III related
NEKLCKCI_00528	0.0	pdtaS	2.7.13.3	-	T	ko:K00936	-	ko00000,ko00002,ko01000,ko01001,ko02022	ATPase histidine kinase DNA gyrase B HSP90 domain protein
NEKLCKCI_00529	6.69e-61	whiB	-	-	K	ko:K18955	-	ko00000,ko03000	Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
NEKLCKCI_00530	0.0	-	-	-	D	ko:K03466	-	ko00000,ko03036	FtsK/SpoIIIE family
NEKLCKCI_00531	0.0	lytR2	-	-	K	-	-	-	Cell envelope-related transcriptional attenuator domain
NEKLCKCI_00532	2.82e-72	whiB2	-	-	K	ko:K18955	-	ko00000,ko03000	Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
NEKLCKCI_00533	0.0	-	-	-	S	-	-	-	Glycosyl transferase, family 2
NEKLCKCI_00534	0.0	-	-	-	-	-	-	-	-
NEKLCKCI_00535	1.05e-85	-	-	-	S	-	-	-	Zincin-like metallopeptidase
NEKLCKCI_00536	2.72e-199	-	-	-	T	-	-	-	Eukaryotic phosphomannomutase
NEKLCKCI_00537	7.4e-165	pyrE_1	-	-	S	-	-	-	Phosphoribosyl transferase domain
NEKLCKCI_00538	3.2e-93	umuD	-	-	KT	ko:K03503	-	ko00000,ko01000,ko01002,ko03400	Peptidase S24-like
NEKLCKCI_00539	1.69e-258	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
NEKLCKCI_00540	9.32e-164	cseB	-	-	T	-	-	-	Response regulator receiver domain protein
NEKLCKCI_00541	0.0	glgB	2.4.1.18	CBM48,GH13	G	ko:K00700	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
NEKLCKCI_00542	1.99e-131	carD	-	-	K	ko:K07736	-	ko00000,ko03000	CarD-like/TRCF domain
NEKLCKCI_00543	3.12e-109	ispF	2.7.7.60, 4.6.1.12	-	H	ko:K01770,ko:K12506	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
NEKLCKCI_00544	2.15e-177	znuB	-	-	U	ko:K02075	-	ko00000,ko00002,ko02000	ABC 3 transport family
NEKLCKCI_00545	6.96e-211	-	-	-	P	ko:K02074	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
NEKLCKCI_00546	1.55e-232	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Zinc-uptake complex component A periplasmic
NEKLCKCI_00547	7e-210	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
NEKLCKCI_00548	0.0	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
NEKLCKCI_00549	4.53e-139	coaE	2.7.1.24	-	H	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
NEKLCKCI_00550	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
NEKLCKCI_00551	4.13e-230	terC	-	-	P	ko:K05794	-	ko00000	Integral membrane protein, TerC family
NEKLCKCI_00552	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Pyruvate kinase
NEKLCKCI_00553	4.9e-142	aspA	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
NEKLCKCI_00555	5.44e-161	pdtaR	-	-	T	ko:K22010	-	ko00000,ko00002,ko02022	Response regulator receiver domain protein
NEKLCKCI_00556	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NEKLCKCI_00557	3.12e-220	-	-	-	L	-	-	-	NIF3 (NGG1p interacting factor 3)
NEKLCKCI_00558	1.56e-153	-	-	-	L	-	-	-	NUDIX domain
NEKLCKCI_00559	0.0	glgX	3.2.1.68	CBM48,GH13	G	ko:K01214	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the glycosyl hydrolase 13 family
NEKLCKCI_00560	5.67e-278	-	-	-	-	-	-	-	-
NEKLCKCI_00562	2.38e-20	-	-	-	-	-	-	-	-
NEKLCKCI_00563	1.3e-58	-	-	-	K	ko:K03830	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
NEKLCKCI_00564	5.61e-23	-	-	-	K	ko:K03830	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
NEKLCKCI_00565	4.21e-21	-	-	-	U	-	-	-	Major Facilitator Superfamily
NEKLCKCI_00566	3.5e-97	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
NEKLCKCI_00567	1.82e-90	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
NEKLCKCI_00568	7.87e-209	-	-	-	S	-	-	-	Aldo/keto reductase family
NEKLCKCI_00569	9.75e-131	-	3.5.1.124	-	S	ko:K05520	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
NEKLCKCI_00570	1.37e-164	-	-	-	-	-	-	-	-
NEKLCKCI_00572	9.85e-140	pepE	3.4.13.21	-	E	ko:K05995	-	ko00000,ko01000,ko01002	Peptidase family S51
NEKLCKCI_00573	0.0	aroA	2.5.1.19	-	E	ko:K00800	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
NEKLCKCI_00574	1.39e-296	ackA	2.7.2.1	-	H	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
NEKLCKCI_00575	0.0	pta	2.3.1.8	-	C	ko:K13788	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	phosphate acetyltransferase
NEKLCKCI_00576	2.71e-101	-	-	-	-	-	-	-	-
NEKLCKCI_00578	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
NEKLCKCI_00579	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
NEKLCKCI_00580	7.55e-243	pitB	-	-	P	ko:K03306	-	ko00000	Phosphate transporter family
NEKLCKCI_00581	2e-149	-	-	-	P	ko:K07220	-	ko00000	Protein of unknown function DUF47
NEKLCKCI_00582	6.55e-155	-	-	-	K	-	-	-	helix_turn_helix, Lux Regulon
NEKLCKCI_00583	8.41e-298	-	-	-	T	-	-	-	Histidine kinase
NEKLCKCI_00584	2.51e-56	pacL	3.6.3.8, 3.6.3.9	-	P	ko:K01537,ko:K01539	ko04022,ko04024,ko04260,ko04261,ko04911,ko04918,ko04919,ko04925,ko04960,ko04961,ko04964,ko04970,ko04971,ko04972,ko04973,ko04974,ko04976,ko04978,map04022,map04024,map04260,map04261,map04911,map04918,map04919,map04925,map04960,map04961,map04964,map04970,map04971,map04972,map04973,map04974,map04976,map04978	ko00000,ko00001,ko01000,ko04147	ATPase, P-type transporting, HAD superfamily, subfamily IC
NEKLCKCI_00585	2.52e-237	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
NEKLCKCI_00586	2.77e-290	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
NEKLCKCI_00587	0.0	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
NEKLCKCI_00588	0.0	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
NEKLCKCI_00589	1.76e-260	-	-	-	L	-	-	-	Transposase and inactivated derivatives IS30 family
NEKLCKCI_00591	4.75e-102	-	-	-	-	-	-	-	-
NEKLCKCI_00592	7.23e-85	-	-	-	D	-	-	-	MobA/MobL family
NEKLCKCI_00593	9e-64	-	-	-	L	ko:K07483	-	ko00000	Transposase
NEKLCKCI_00594	1.31e-124	tnp3521a2	-	-	L	-	-	-	Integrase core domain
NEKLCKCI_00595	8.68e-229	-	-	-	L	-	-	-	Phage integrase family
NEKLCKCI_00596	2.45e-61	-	-	-	-	-	-	-	-
NEKLCKCI_00597	3.27e-183	nfrA	-	-	C	-	-	-	Nitroreductase family
NEKLCKCI_00598	9.49e-90	-	-	-	S	-	-	-	Protein of unknown function (DUF4235)
NEKLCKCI_00599	1.02e-171	gpm2	3.1.3.73	-	G	ko:K02226	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Phosphoglycerate mutase family
NEKLCKCI_00601	9.58e-244	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
NEKLCKCI_00602	0.0	strK	3.1.3.1, 3.1.3.39	-	P	ko:K01077,ko:K04342	ko00521,ko00730,ko00790,ko01100,ko01130,ko02020,map00521,map00730,map00790,map01100,map01130,map02020	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	Alkaline phosphatase homologues
NEKLCKCI_00603	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
NEKLCKCI_00604	3.29e-80	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
NEKLCKCI_00605	2.72e-236	dnaJ	-	-	O	ko:K03686,ko:K05516	-	ko00000,ko03029,ko03036,ko03110	DnaJ molecular chaperone homology domain
NEKLCKCI_00606	9.12e-112	hspR	-	-	K	ko:K13640	-	ko00000,ko03000	transcriptional regulator, MerR family
NEKLCKCI_00607	0.0	-	3.2.1.18	GH33	G	ko:K01186	ko00511,ko00600,ko04142,map00511,map00600,map04142	ko00000,ko00001,ko01000,ko02042	BNR repeat-like domain
NEKLCKCI_00608	0.0	-	3.2.1.18	GH33	G	ko:K01186	ko00511,ko00600,ko04142,map00511,map00600,map04142	ko00000,ko00001,ko01000,ko02042	BNR Asp-box repeat
NEKLCKCI_00609	1.67e-177	-	-	-	S	-	-	-	HAD hydrolase, family IA, variant 3
NEKLCKCI_00611	7.42e-162	dedA1	-	-	S	ko:K03975	-	ko00000	SNARE associated Golgi protein
NEKLCKCI_00612	7.3e-219	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
NEKLCKCI_00613	1.6e-83	-	-	-	-	-	-	-	-
NEKLCKCI_00614	9.35e-171	-	-	-	-	-	-	-	-
NEKLCKCI_00615	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NEKLCKCI_00616	1.72e-110	-	-	-	K	-	-	-	Transcriptional regulator
NEKLCKCI_00618	1.33e-45	-	-	-	G	ko:K16210	-	ko00000,ko02000	MFS/sugar transport protein
NEKLCKCI_00619	3.03e-248	-	-	-	G	ko:K16210	-	ko00000,ko02000	MFS/sugar transport protein
NEKLCKCI_00620	6.41e-236	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	TatD related DNase
NEKLCKCI_00621	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
NEKLCKCI_00623	3.34e-211	-	-	-	S	-	-	-	Glutamine amidotransferase domain
NEKLCKCI_00624	3.28e-176	-	-	-	T	ko:K06950	-	ko00000	HD domain
NEKLCKCI_00625	3.99e-270	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
NEKLCKCI_00626	0.0	-	-	-	V	-	-	-	ABC transporter permease
NEKLCKCI_00627	0.0	-	-	-	H	-	-	-	Protein of unknown function (DUF4012)
NEKLCKCI_00628	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.87
NEKLCKCI_00629	1.93e-211	thiG	2.8.1.10	-	H	ko:K03149	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
NEKLCKCI_00630	2.41e-37	thiS	-	-	H	ko:K03154	ko04122,map04122	ko00000,ko00001	ThiS family
NEKLCKCI_00631	0.00015	-	-	-	-	-	-	-	-
NEKLCKCI_00632	0.0	-	-	-	-	-	-	-	-
NEKLCKCI_00633	3.04e-266	-	-	-	S	-	-	-	Glycosyltransferase, group 2 family protein
NEKLCKCI_00634	3.15e-75	ureD	-	-	O	ko:K03190	-	ko00000	Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
NEKLCKCI_00635	1.97e-56	cbiM	-	-	P	ko:K02007	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PDGLE domain
NEKLCKCI_00636	3.04e-129	-	-	-	-	-	-	-	-
NEKLCKCI_00637	5.71e-257	mutT	3.6.1.55	-	LT	ko:K03574	-	ko00000,ko01000,ko03400	Phosphoglycerate mutase family
NEKLCKCI_00638	0.0	ppk	2.7.4.1	-	P	ko:K00937	ko00190,ko03018,map00190,map03018	ko00000,ko00001,ko01000,ko03019	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
NEKLCKCI_00640	3.85e-196	-	-	-	D	-	-	-	bacterial-type flagellum organization
NEKLCKCI_00641	6.74e-244	cpaF	-	-	U	ko:K02283	-	ko00000,ko02035,ko02044	Type II IV secretion system protein
NEKLCKCI_00642	6.16e-156	-	-	-	U	ko:K12510	-	ko00000,ko02044	Type ii secretion system
NEKLCKCI_00643	2.66e-112	-	-	-	NU	-	-	-	Type II secretion system (T2SS), protein F
NEKLCKCI_00644	1.13e-54	-	-	-	S	-	-	-	Protein of unknown function (DUF4244)
NEKLCKCI_00645	1.28e-73	-	-	-	U	-	-	-	TadE-like protein
NEKLCKCI_00646	3.62e-73	-	-	-	S	-	-	-	TIGRFAM helicase secretion neighborhood TadE-like protein
NEKLCKCI_00647	3.79e-273	-	2.7.1.107	-	I	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Diacylglycerol kinase catalytic domain protein
NEKLCKCI_00648	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III subunit gamma tau
NEKLCKCI_00649	1.21e-142	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
NEKLCKCI_00650	2.68e-175	ask	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Amino acid kinase family
NEKLCKCI_00651	2.36e-125	ask	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	ACT domain
NEKLCKCI_00653	5.34e-269	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
NEKLCKCI_00654	1.77e-148	-	-	-	-	-	-	-	-
NEKLCKCI_00655	0.0	-	2.7.11.1	-	S	ko:K12132	-	ko00000,ko01000,ko01001	PASTA domain
NEKLCKCI_00656	0.0	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
NEKLCKCI_00657	0.0	leuA	2.3.3.13	-	E	ko:K01649	ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
NEKLCKCI_00658	0.0	pbp5	-	-	M	-	-	-	Transglycosylase
NEKLCKCI_00659	1.27e-295	glf	5.4.99.9	-	M	ko:K01854	ko00052,ko00520,map00052,map00520	ko00000,ko00001,ko01000	UDP-galactopyranose mutase
NEKLCKCI_00660	6.24e-180	-	-	-	S	ko:K11068	-	ko00000,ko02042	Haemolysin-III related
NEKLCKCI_00661	0.0	-	-	-	M	-	-	-	PA domain
NEKLCKCI_00662	2.65e-250	-	-	-	I	-	-	-	PAP2 superfamily
NEKLCKCI_00663	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
NEKLCKCI_00664	2.08e-158	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
NEKLCKCI_00665	4.97e-271	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
NEKLCKCI_00666	8.04e-257	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
NEKLCKCI_00667	1.47e-50	hpr	-	-	G	ko:K11189	-	ko00000,ko02000	PTS HPr component phosphorylation site
NEKLCKCI_00668	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NEKLCKCI_00669	4.92e-53	-	-	-	S	-	-	-	Fic/DOC family
NEKLCKCI_00670	2.11e-250	-	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
NEKLCKCI_00671	3.52e-32	-	-	-	G	-	-	-	MFS/sugar transport protein
NEKLCKCI_00672	0.0	-	-	-	P	ko:K07243	-	ko00000,ko02000	Iron permease FTR1 family
NEKLCKCI_00673	4.8e-150	-	-	-	P	ko:K07230	-	ko00000,ko02000	Fe2+ transport protein
NEKLCKCI_00674	1.76e-295	-	-	-	S	-	-	-	Predicted membrane protein (DUF2318)
NEKLCKCI_00675	1.87e-288	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
NEKLCKCI_00676	3.5e-276	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
NEKLCKCI_00677	7.76e-191	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
NEKLCKCI_00678	8.08e-103	-	-	-	S	-	-	-	FMN_bind
NEKLCKCI_00679	1.5e-167	-	-	-	K	ko:K03489,ko:K03710	-	ko00000,ko03000	UTRA
NEKLCKCI_00680	1.32e-85	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
NEKLCKCI_00681	0.0	-	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
NEKLCKCI_00682	5.95e-65	-	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
NEKLCKCI_00683	1.29e-66	-	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIA subunit
NEKLCKCI_00684	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Glycosyl hydrolase family 1
NEKLCKCI_00685	1.89e-47	-	-	-	Q	-	-	-	phosphatase activity
NEKLCKCI_00686	2.24e-103	-	-	-	-	-	-	-	-
NEKLCKCI_00687	1.13e-307	-	-	-	S	-	-	-	Putative ABC-transporter type IV
NEKLCKCI_00688	3.89e-206	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
NEKLCKCI_00690	4.05e-221	-	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
NEKLCKCI_00691	1.31e-269	-	-	-	M	ko:K20276	ko02024,map02024	ko00000,ko00001	chlorophyll binding
NEKLCKCI_00692	4.97e-235	-	-	-	M	ko:K20276	ko02024,map02024	ko00000,ko00001	chlorophyll binding
NEKLCKCI_00693	0.0	-	-	-	M	-	-	-	LPXTG cell wall anchor motif
NEKLCKCI_00694	7.68e-105	-	-	-	K	-	-	-	Winged helix DNA-binding domain
NEKLCKCI_00695	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter, ATP-binding protein
NEKLCKCI_00696	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter transmembrane region
NEKLCKCI_00697	8.19e-107	-	-	-	-	-	-	-	-
NEKLCKCI_00698	4.02e-89	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
NEKLCKCI_00699	5.86e-25	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
NEKLCKCI_00701	0.0	-	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Peptidase family C69
NEKLCKCI_00702	0.0	-	-	-	S	-	-	-	Glycosyl hydrolases related to GH101 family, GH129
NEKLCKCI_00703	1.96e-254	-	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	Glycosyltransferase like family 2
NEKLCKCI_00704	1.36e-171	icaR	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
NEKLCKCI_00706	1.83e-278	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
NEKLCKCI_00707	8.54e-305	amt	-	-	U	ko:K03320	-	ko00000,ko02000	Ammonium Transporter Family
NEKLCKCI_00708	2.56e-72	glnB	-	-	K	ko:K04751	ko02020,map02020	ko00000,ko00001	Nitrogen regulatory protein P-II
NEKLCKCI_00709	0.0	glnD	2.7.7.59	-	O	ko:K00990	ko02020,map02020	ko00000,ko00001,ko01000	Nucleotidyltransferase domain
NEKLCKCI_00710	0.0	dinF	-	-	V	-	-	-	MatE
NEKLCKCI_00711	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
NEKLCKCI_00712	0.0	murE	-	-	M	-	-	-	Domain of unknown function (DUF1727)
NEKLCKCI_00713	1.02e-181	cobQ2	-	-	S	ko:K07009	-	ko00000	CobB/CobQ-like glutamine amidotransferase domain
NEKLCKCI_00714	3.15e-44	-	-	-	S	-	-	-	granule-associated protein
NEKLCKCI_00715	0.0	-	-	-	S	ko:K03688	-	ko00000	ABC1 family
NEKLCKCI_00716	0.0	-	3.6.3.4, 3.6.3.54	-	P	ko:K01533,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	E1-E2 ATPase
NEKLCKCI_00717	6.68e-57	csoR	-	-	S	ko:K21600	-	ko00000,ko03000	Metal-sensitive transcriptional repressor
NEKLCKCI_00718	2.51e-298	rmuC	-	-	S	ko:K09760	-	ko00000	RmuC family
NEKLCKCI_00719	2.47e-164	pyrE1	-	-	F	-	-	-	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
NEKLCKCI_00720	1.94e-213	trmH	2.1.1.34	-	J	ko:K00556	-	ko00000,ko01000,ko03016	RNA methyltransferase TrmH family
NEKLCKCI_00721	4.24e-78	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
NEKLCKCI_00722	5.3e-79	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
NEKLCKCI_00723	3.33e-64	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NEKLCKCI_00724	0.0	gatA	6.3.5.6, 6.3.5.7	-	F	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
NEKLCKCI_00725	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NEKLCKCI_00726	1.96e-251	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
NEKLCKCI_00727	6.51e-69	-	-	-	S	-	-	-	Protein of unknown function (DUF2469)
NEKLCKCI_00729	0.0	-	-	-	H	-	-	-	Flavin containing amine oxidoreductase
NEKLCKCI_00730	0.0	rho	-	-	K	ko:K03628	ko03018,map03018	ko00000,ko00001,ko03019,ko03021	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
NEKLCKCI_00731	8.68e-299	-	2.6.1.1	-	E	ko:K00812,ko:K10907	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase class I and II
NEKLCKCI_00732	7.67e-118	lrp_3	-	-	K	ko:K03719	-	ko00000,ko03000,ko03036	helix_turn_helix ASNC type
NEKLCKCI_00733	9.37e-96	tyrA	5.4.99.5	-	E	ko:K04092	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Chorismate mutase type II
NEKLCKCI_00734	0.0	-	-	-	S	-	-	-	domain protein
NEKLCKCI_00735	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
NEKLCKCI_00736	0.0	-	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
NEKLCKCI_00737	8.16e-154	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
NEKLCKCI_00738	7.59e-173	glnR	-	-	KT	-	-	-	Transcriptional regulatory protein, C terminal
NEKLCKCI_00739	5.6e-170	-	-	-	-	-	-	-	-
NEKLCKCI_00740	2.85e-134	mntP	-	-	P	-	-	-	Probably functions as a manganese efflux pump
NEKLCKCI_00742	1.13e-118	ppa	3.6.1.1	-	C	ko:K01507	ko00190,map00190	ko00000,ko00001,ko01000	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
NEKLCKCI_00743	0.0	glgE	2.4.99.16	GH13	G	ko:K16147	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
NEKLCKCI_00744	0.0	-	-	-	K	-	-	-	RNA polymerase II activating transcription factor binding
NEKLCKCI_00745	2.63e-48	-	-	-	-	-	-	-	-
NEKLCKCI_00747	2.41e-264	metAA	2.3.1.46	-	E	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
NEKLCKCI_00748	4.13e-187	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
NEKLCKCI_00749	2.39e-41	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NEKLCKCI_00750	7.5e-98	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
NEKLCKCI_00751	5.66e-192	atpH	-	-	C	ko:K02109,ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NEKLCKCI_00752	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
NEKLCKCI_00753	2.73e-213	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
NEKLCKCI_00754	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
NEKLCKCI_00755	1.39e-66	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
NEKLCKCI_00756	3.16e-168	nucS	-	-	L	ko:K07503	-	ko00000,ko01000	Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
NEKLCKCI_00757	8.27e-187	-	-	-	QT	-	-	-	PucR C-terminal helix-turn-helix domain
NEKLCKCI_00758	0.0	-	-	-	-	-	-	-	-
NEKLCKCI_00759	4.75e-196	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Biotin/lipoate A/B protein ligase family
NEKLCKCI_00760	2.14e-119	bioY	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	BioY family
NEKLCKCI_00761	0.0	accC	6.3.4.14, 6.4.1.2, 6.4.1.3	-	I	ko:K11263	ko00061,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase L chain, ATP binding domain protein
NEKLCKCI_00762	0.0	pccB	-	-	I	-	-	-	Carboxyl transferase domain
NEKLCKCI_00763	0.0	fas	-	-	I	ko:K11533	ko00061,ko01100,ko01212,ko04931,map00061,map01100,map01212,map04931	ko00000,ko00001,ko00002,ko01000,ko01004	Beta-ketoacyl synthase, C-terminal domain
NEKLCKCI_00764	5.82e-130	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
NEKLCKCI_00765	4.39e-209	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Biotin/lipoate A/B protein ligase family
NEKLCKCI_00767	0.0	-	3.2.1.35	-	G	ko:K01197	ko00531,ko01100,map00531,map01100	ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042	beta-N-acetylglucosaminidase
NEKLCKCI_00768	3.14e-155	-	-	-	-	-	-	-	-
NEKLCKCI_00769	8.32e-56	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
NEKLCKCI_00770	0.0	pnp	2.7.7.8	-	J	ko:K00962	ko00230,ko00240,ko03018,map00230,map00240,map03018	ko00000,ko00001,ko00002,ko01000,ko03016,ko03019	Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
NEKLCKCI_00771	1.39e-150	xylR	-	-	K	ko:K02529	-	ko00000,ko03000	purine nucleotide biosynthetic process
NEKLCKCI_00772	2.19e-56	-	-	-	K	-	-	-	purine nucleotide biosynthetic process
NEKLCKCI_00773	1.52e-122	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
NEKLCKCI_00774	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2207)
NEKLCKCI_00775	2.45e-91	megL	4.4.1.11	-	E	ko:K01761	ko00270,ko00450,map00270,map00450	ko00000,ko00001,ko01000	Cys/Met metabolism PLP-dependent enzyme
NEKLCKCI_00776	1.03e-242	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NEKLCKCI_00777	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NEKLCKCI_00778	3.47e-128	nrdI	-	-	F	ko:K03647	-	ko00000	Probably involved in ribonucleotide reductase function
NEKLCKCI_00779	1.26e-55	nrdH	-	-	O	ko:K06191	-	ko00000	Glutaredoxin
NEKLCKCI_00780	6.85e-214	-	-	-	C	-	-	-	Oxidoreductase, aldo keto reductase family protein
NEKLCKCI_00781	1.25e-215	-	-	-	L	-	-	-	Transposase and inactivated derivatives IS30 family
NEKLCKCI_00782	0.0	-	-	-	O	ko:K08303	ko05120,map05120	ko00000,ko00001,ko01000,ko01002	Peptidase family U32 C-terminal domain
NEKLCKCI_00783	2.25e-240	yfiH	-	-	Q	ko:K05810	-	ko00000,ko01000	Multi-copper polyphenol oxidoreductase laccase
NEKLCKCI_00784	5.01e-183	ispD	1.1.1.405, 2.7.7.40, 2.7.7.60	-	I	ko:K00991,ko:K21681	ko00040,ko00900,ko01100,ko01110,ko01130,map00040,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
NEKLCKCI_00785	2.61e-163	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
NEKLCKCI_00786	1.08e-123	-	-	-	D	-	-	-	nuclear chromosome segregation
NEKLCKCI_00787	0.0	pepC2	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
NEKLCKCI_00788	2.9e-231	-	-	-	L	-	-	-	Excalibur calcium-binding domain
NEKLCKCI_00789	1.14e-276	aroG	2.5.1.54	-	E	ko:K01626	ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024	ko00000,ko00001,ko00002,ko01000	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NEKLCKCI_00790	1.1e-312	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
NEKLCKCI_00791	2.63e-142	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
NEKLCKCI_00792	3.6e-305	aroG	2.5.1.54	-	E	ko:K01626	ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024	ko00000,ko00001,ko00002,ko01000	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NEKLCKCI_00793	7.68e-161	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
NEKLCKCI_00794	2.48e-309	phoR	2.7.13.3	-	T	ko:K07636,ko:K07768	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	His Kinase A (phosphoacceptor) domain
NEKLCKCI_00795	3.28e-166	regX3	-	-	KT	ko:K07776	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C terminal
NEKLCKCI_00796	1.71e-262	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import
NEKLCKCI_00797	8.51e-219	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
NEKLCKCI_00798	1.89e-233	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease
NEKLCKCI_00799	1.29e-189	pstB	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
NEKLCKCI_00800	7.39e-219	-	-	-	S	-	-	-	Protein conserved in bacteria
NEKLCKCI_00802	5.92e-313	-	-	-	S	ko:K06901	-	ko00000,ko02000	Permease family
NEKLCKCI_00804	0.0	-	-	-	G	-	-	-	BNR repeat-like domain
NEKLCKCI_00805	5.46e-230	xynB2	1.1.1.169	-	E	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	lipolytic protein G-D-S-L family
NEKLCKCI_00806	5.06e-115	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
NEKLCKCI_00807	5.13e-61	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
NEKLCKCI_00809	0.0	-	-	-	T	-	-	-	Forkhead associated domain
NEKLCKCI_00810	0.0	-	-	-	L	-	-	-	Superfamily I DNA and RNA helicases and helicase subunits
NEKLCKCI_00811	2.87e-56	-	-	-	-	-	-	-	-
NEKLCKCI_00812	7.04e-140	-	-	-	NO	-	-	-	SAF
NEKLCKCI_00813	1.88e-51	-	-	-	S	-	-	-	Putative regulatory protein
NEKLCKCI_00814	3.43e-155	ygfA	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	5-formyltetrahydrofolate cyclo-ligase family
NEKLCKCI_00815	1.2e-191	rimJ	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
NEKLCKCI_00816	2.25e-266	-	-	-	-	-	-	-	-
NEKLCKCI_00817	3.49e-63	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
NEKLCKCI_00818	9.61e-168	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
NEKLCKCI_00819	6.42e-57	yeaC	-	-	S	ko:K03924	-	ko00000,ko01000	ATPase family associated with various cellular activities (AAA)
NEKLCKCI_00824	2.71e-35	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L33
NEKLCKCI_00825	4.5e-279	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
NEKLCKCI_00826	3.55e-81	fdxA	-	-	C	ko:K05524	-	ko00000	4Fe-4S binding domain
NEKLCKCI_00827	2.84e-285	dapC	-	-	E	-	-	-	Aminotransferase class I and II
NEKLCKCI_00828	1.89e-306	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
NEKLCKCI_00830	0.0	-	-	-	M	ko:K07282	-	ko00000	Bacterial capsule synthesis protein PGA_cap
NEKLCKCI_00831	4e-147	yigZ	-	-	S	-	-	-	Uncharacterized protein family UPF0029
NEKLCKCI_00832	1.25e-156	-	-	-	-	-	-	-	-
NEKLCKCI_00833	0.0	malQ	2.4.1.25	GH77	G	ko:K00705	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	4-alpha-glucanotransferase
NEKLCKCI_00834	2.64e-103	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
NEKLCKCI_00835	1.71e-99	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
NEKLCKCI_00836	0.0	glgX	3.2.1.196, 3.2.1.68	CBM48,GH13	G	ko:K01214,ko:K02438	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the glycosyl hydrolase 13 family
NEKLCKCI_00837	2.49e-297	-	-	-	GK	-	-	-	transcriptional repressor of nag (N-acetylglucosamine) operon K02565
NEKLCKCI_00838	0.0	adhE	1.1.1.1, 1.2.1.10, 1.2.1.81	-	C	ko:K04072,ko:K15515	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
NEKLCKCI_00839	1.36e-213	budA	4.1.1.5	-	H	ko:K01575	ko00650,ko00660,map00650,map00660	ko00000,ko00001,ko01000	Alpha-acetolactate decarboxylase
NEKLCKCI_00840	3.03e-40	-	-	-	S	-	-	-	YwiC-like protein
NEKLCKCI_00841	6.49e-05	-	-	-	S	-	-	-	YwiC-like protein
NEKLCKCI_00842	5.42e-67	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
NEKLCKCI_00843	6.65e-153	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
NEKLCKCI_00844	1.34e-154	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
NEKLCKCI_00845	2.54e-61	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
NEKLCKCI_00846	1.15e-196	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
NEKLCKCI_00847	1.4e-62	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
NEKLCKCI_00848	2.21e-74	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
NEKLCKCI_00849	2.73e-161	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
NEKLCKCI_00850	2.71e-98	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
NEKLCKCI_00851	6.77e-51	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
NEKLCKCI_00852	9.4e-57	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
NEKLCKCI_00853	7.32e-79	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
NEKLCKCI_00854	9.32e-70	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
NEKLCKCI_00855	1.6e-133	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
NEKLCKCI_00856	7.06e-40	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
NEKLCKCI_00857	9.65e-91	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
NEKLCKCI_00858	2.69e-122	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
NEKLCKCI_00859	1.53e-76	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
NEKLCKCI_00860	2.04e-149	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
NEKLCKCI_00861	1.46e-34	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30p/L7e
NEKLCKCI_00862	1.51e-94	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	binds to the 23S rRNA
NEKLCKCI_00863	0.0	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
NEKLCKCI_00864	4.79e-129	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
NEKLCKCI_00865	6.91e-45	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
NEKLCKCI_00866	1.03e-20	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
NEKLCKCI_00867	6.96e-83	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
NEKLCKCI_00868	7.34e-86	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
NEKLCKCI_00869	1.4e-236	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NEKLCKCI_00870	2.18e-94	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
NEKLCKCI_00871	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	hydrolase family 20, catalytic
NEKLCKCI_00872	4.08e-221	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
NEKLCKCI_00873	0.0	gcs2	-	-	S	ko:K06048	-	ko00000,ko01000	A circularly permuted ATPgrasp
NEKLCKCI_00874	9.14e-198	-	-	-	E	-	-	-	Transglutaminase/protease-like homologues
NEKLCKCI_00876	1.05e-167	tnp3503b	-	-	L	-	-	-	Transposase and inactivated derivatives
NEKLCKCI_00877	1.33e-226	-	-	-	-	-	-	-	-
NEKLCKCI_00878	1.16e-241	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
NEKLCKCI_00879	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
NEKLCKCI_00880	8.76e-124	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
NEKLCKCI_00881	9.52e-301	truB	5.4.99.25	-	J	ko:K03177	-	ko00000,ko01000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
NEKLCKCI_00882	1.78e-304	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	riboflavin kinase
NEKLCKCI_00883	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
NEKLCKCI_00884	6.9e-142	-	-	-	-	-	-	-	-
NEKLCKCI_00885	5.18e-07	-	-	-	S	-	-	-	Mitochondrial domain of unknown function (DUF1713)
NEKLCKCI_00886	1.28e-162	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
NEKLCKCI_00887	4.34e-261	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NEKLCKCI_00888	0.0	-	3.2.1.35	-	G	ko:K01197	ko00531,ko01100,map00531,map01100	ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042	beta-N-acetylglucosaminidase
NEKLCKCI_00889	0.0	merA	1.16.1.1	-	C	ko:K00520,ko:K21739	-	ko00000,ko01000	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NEKLCKCI_00890	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
NEKLCKCI_00892	1.72e-90	-	-	-	M	-	-	-	Spy0128-like isopeptide containing domain
NEKLCKCI_00893	8.64e-05	-	-	-	O	ko:K18546	-	ko00000,ko01000,ko01002	Peptidase s1 and s6 chymotrypsin hap
NEKLCKCI_00894	0.0	ptsG	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	pts system, glucose-specific IIABC component
NEKLCKCI_00895	5.06e-198	arbG	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
NEKLCKCI_00896	3.25e-273	-	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
NEKLCKCI_00897	0.0	-	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	5'-nucleotidase, C-terminal domain
NEKLCKCI_00898	1.26e-304	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
NEKLCKCI_00900	0.0	-	3.2.1.50	-	G	ko:K01205	ko00531,ko01100,ko04142,map00531,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko04147	Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain
NEKLCKCI_00902	4.52e-123	-	-	-	-	-	-	-	-
NEKLCKCI_00903	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
NEKLCKCI_00904	7.54e-240	opcA	-	-	G	-	-	-	Glucose-6-phosphate dehydrogenase subunit
NEKLCKCI_00905	5.83e-181	pgl	3.1.1.31	-	G	ko:K01057	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
NEKLCKCI_00907	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
NEKLCKCI_00908	1.18e-162	tcsR3	-	-	K	-	-	-	helix_turn_helix, Lux Regulon
NEKLCKCI_00909	0.0	tcsS3	-	-	KT	-	-	-	PspC domain
NEKLCKCI_00910	0.0	pspC	-	-	KT	-	-	-	PspC domain
NEKLCKCI_00911	1.6e-203	-	-	-	-	-	-	-	-
NEKLCKCI_00912	9.55e-146	-	-	-	S	-	-	-	Protein of unknown function (DUF4125)
NEKLCKCI_00913	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4037)
NEKLCKCI_00914	7.45e-278	-	-	-	EGP	ko:K08156,ko:K19577	-	ko00000,ko02000	Major Facilitator Superfamily
NEKLCKCI_00916	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
NEKLCKCI_00917	2.89e-224	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the MenA family. Type 1 subfamily
NEKLCKCI_00918	3.69e-178	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
NEKLCKCI_00920	9.33e-153	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
NEKLCKCI_00921	9.24e-288	senX3	2.7.13.3	-	T	ko:K07768	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	ATPase histidine kinase DNA gyrase B HSP90 domain protein
NEKLCKCI_00922	4.6e-53	-	-	-	-	-	-	-	-
NEKLCKCI_00923	1.28e-275	serC	2.6.1.52	-	E	ko:K00831	ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
NEKLCKCI_00924	3.37e-228	-	-	-	S	-	-	-	CHAP domain
NEKLCKCI_00925	2.08e-147	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
NEKLCKCI_00926	1.31e-244	-	-	-	T	-	-	-	Universal stress protein family
NEKLCKCI_00927	5.09e-93	-	-	-	O	-	-	-	OsmC-like protein
NEKLCKCI_00928	4.99e-223	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
NEKLCKCI_00929	5.46e-165	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	dihydrofolate reductase
NEKLCKCI_00930	2.34e-124	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	low molecular weight
NEKLCKCI_00931	1.27e-249	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
NEKLCKCI_00932	1.86e-31	-	-	-	E	-	-	-	Branched-chain amino acid transport protein (AzlD)
NEKLCKCI_00933	5.06e-145	vex	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
NEKLCKCI_00934	7.89e-270	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	Efflux ABC transporter, permease protein
NEKLCKCI_00935	4.37e-289	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
NEKLCKCI_00936	2e-09	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.99
NEKLCKCI_00937	1.38e-235	-	-	-	-	-	-	-	-
NEKLCKCI_00938	6.72e-140	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
NEKLCKCI_00939	1.02e-152	-	-	-	V	-	-	-	N-Acetylmuramoyl-L-alanine amidase
NEKLCKCI_00940	1.03e-141	-	-	-	-	-	-	-	-
NEKLCKCI_00941	1.83e-244	cbs	2.5.1.47, 4.2.1.22	-	E	ko:K01697,ko:K01738	ko00260,ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Pyridoxal-phosphate dependent enzyme
NEKLCKCI_00942	9.41e-283	metB	2.5.1.48	-	E	ko:K01739	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Cys/Met metabolism PLP-dependent enzyme
NEKLCKCI_00943	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
NEKLCKCI_00944	8.97e-119	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
NEKLCKCI_00946	2.63e-121	cysE	-	-	J	-	-	-	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NEKLCKCI_00947	0.0	aap1	-	-	E	ko:K03294	-	ko00000	aromatic amino acid transport protein AroP K03293
NEKLCKCI_00948	0.0	alr	5.1.1.1	-	M	ko:K01775	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
NEKLCKCI_00949	3.55e-313	dgt	3.1.5.1	-	F	ko:K01129	ko00230,map00230	ko00000,ko00001,ko01000	Phosphohydrolase-associated domain
NEKLCKCI_00950	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
NEKLCKCI_00951	8.77e-203	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
NEKLCKCI_00952	8.56e-289	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
NEKLCKCI_00953	3.01e-59	-	-	-	S	ko:K06990	-	ko00000,ko04812	Memo-like protein
NEKLCKCI_00955	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
NEKLCKCI_00956	8.31e-228	yogA	-	-	C	-	-	-	Zinc-binding dehydrogenase
NEKLCKCI_00957	5.14e-111	purE	5.4.99.18	-	F	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
NEKLCKCI_00958	8.53e-290	purK	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
NEKLCKCI_00959	1.27e-94	fur	-	-	P	ko:K03711	-	ko00000,ko03000	Belongs to the Fur family
NEKLCKCI_00960	2.28e-62	-	-	-	-	-	-	-	-
NEKLCKCI_00961	3.19e-198	-	-	-	S	-	-	-	TIGRFAM TIGR03943 family protein
NEKLCKCI_00962	2.5e-258	-	-	-	S	ko:K07089	-	ko00000	Predicted permease
NEKLCKCI_00963	1.07e-32	-	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Ribosomal L32p protein family
NEKLCKCI_00964	3.58e-20	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L36
NEKLCKCI_00965	7.57e-57	rpmE2	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
NEKLCKCI_00966	4.85e-65	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
NEKLCKCI_00967	2.64e-63	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal L28 family
NEKLCKCI_00968	4.46e-179	-	-	-	S	-	-	-	cobalamin synthesis protein
NEKLCKCI_00969	6.69e-209	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Zinc-uptake complex component A periplasmic
NEKLCKCI_00970	0.0	lysX	-	-	S	-	-	-	Uncharacterised conserved protein (DUF2156)
NEKLCKCI_00971	0.0	-	-	-	S	-	-	-	Putative esterase
NEKLCKCI_00972	0.0	-	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score 9.26
NEKLCKCI_00973	5.35e-307	purD	6.3.3.1, 6.3.4.13	-	F	ko:K01945,ko:K11788	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the GARS family
NEKLCKCI_00974	2.1e-245	purM	6.3.3.1	-	F	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoribosylformylglycinamidine cyclo-ligase
NEKLCKCI_00975	0.0	purF	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
NEKLCKCI_00976	0.0	-	-	-	L	ko:K03502	-	ko00000,ko03400	DNA-damage repair protein (DNA polymerase IV) K00961
NEKLCKCI_00977	9.82e-45	-	-	-	-	-	-	-	-
NEKLCKCI_00978	1.64e-90	gloA	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
NEKLCKCI_00979	4.51e-44	-	-	-	K	-	-	-	DNA-binding transcription factor activity
NEKLCKCI_00980	3.66e-187	nnrE	-	-	L	-	-	-	Uracil DNA glycosylase superfamily
NEKLCKCI_00981	2.2e-140	-	-	-	S	-	-	-	Protein of unknown function (DUF4230)
NEKLCKCI_00982	6.26e-146	-	-	-	-	-	-	-	-
NEKLCKCI_00983	0.0	purL	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	CobB/CobQ-like glutamine amidotransferase domain
NEKLCKCI_00984	2.05e-177	purC	6.3.2.6	-	F	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the SAICAR synthetase family
NEKLCKCI_00985	4.7e-299	purT	2.1.2.2	-	F	ko:K08289	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
NEKLCKCI_00986	0.0	-	-	-	M	-	-	-	Parallel beta-helix repeats
NEKLCKCI_00987	1.04e-289	-	-	-	M	-	-	-	Glycosyl transferase 4-like domain
NEKLCKCI_00988	1.33e-255	ltaE	4.1.2.48	-	E	ko:K01620	ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	Beta-eliminating lyase
NEKLCKCI_00990	5.77e-81	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
NEKLCKCI_00991	9.4e-105	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
NEKLCKCI_00992	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
NEKLCKCI_00993	5.83e-293	tuf	-	-	J	ko:K02358	-	ko00000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
NEKLCKCI_00994	0.0	-	-	-	S	-	-	-	Esterase-like activity of phytase
NEKLCKCI_00995	7.97e-250	-	-	-	EGP	-	-	-	Transmembrane secretion effector
NEKLCKCI_00997	3.8e-135	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
NEKLCKCI_00998	1.61e-147	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NEKLCKCI_00999	1.4e-303	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the CarA family
NEKLCKCI_01000	0.0	carB	6.3.5.5	-	EF	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
NEKLCKCI_01001	0.0	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
NEKLCKCI_01002	0.0	-	-	-	S	-	-	-	Protein of unknown function DUF262
NEKLCKCI_01003	6.09e-152	-	-	-	K	-	-	-	helix_turn_helix, Lux Regulon
NEKLCKCI_01004	0.0	-	-	-	T	-	-	-	Histidine kinase
NEKLCKCI_01005	2.17e-151	-	-	-	S	-	-	-	Domain of unknown function (DUF5067)
NEKLCKCI_01006	8.71e-176	-	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
NEKLCKCI_01007	1.01e-214	-	-	-	EG	-	-	-	EamA-like transporter family
NEKLCKCI_01008	1.42e-156	ywaC	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	Region found in RelA / SpoT proteins
NEKLCKCI_01009	0.0	miaB	2.8.4.3	-	H	ko:K06168	-	ko00000,ko01000,ko03016	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
NEKLCKCI_01010	2.54e-235	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
NEKLCKCI_01011	3.51e-174	fic	-	-	D	ko:K04095	-	ko00000,ko03036	Fic/DOC family
NEKLCKCI_01012	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	FtsK SpoIIIE family protein
NEKLCKCI_01013	6.37e-160	pgsA	2.7.8.41, 2.7.8.5	-	I	ko:K00995,ko:K08744	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NEKLCKCI_01014	1.14e-124	cinA	3.5.1.42	-	S	ko:K03743	ko00760,map00760	ko00000,ko00001,ko01000	Belongs to the CinA family
NEKLCKCI_01015	1.03e-105	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
NEKLCKCI_01016	3.38e-54	-	-	-	S	-	-	-	Protein of unknown function (DUF3046)
NEKLCKCI_01017	7.71e-276	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
NEKLCKCI_01018	1.2e-113	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Modulates RecA activity
NEKLCKCI_01021	3.68e-152	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
NEKLCKCI_01022	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
NEKLCKCI_01023	4.2e-242	trpD	2.4.2.18	-	F	ko:K00766	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
NEKLCKCI_01024	4.56e-142	-	-	-	-	-	-	-	-
NEKLCKCI_01025	3.55e-172	plsC2	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Phosphate acyltransferases
NEKLCKCI_01026	0.0	pknL	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	PASTA
NEKLCKCI_01027	7.75e-258	idsA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13787	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
NEKLCKCI_01028	3.42e-158	-	-	-	-	-	-	-	-
NEKLCKCI_01029	1.99e-250	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
NEKLCKCI_01030	0.0	gyrB2	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	DNA topoisomerase (ATP-hydrolyzing)
NEKLCKCI_01031	0.0	aspA	4.3.1.1	-	E	ko:K01744	ko00250,ko01100,map00250,map01100	ko00000,ko00001,ko01000	Fumarase C C-terminus
NEKLCKCI_01032	1.12e-49	-	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
NEKLCKCI_01033	0.0	lhr	-	-	L	ko:K03724	-	ko00000,ko01000,ko03400	DEAD DEAH box helicase
NEKLCKCI_01034	0.0	gyrA2	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	DNA topoisomerase (ATP-hydrolyzing)
NEKLCKCI_01035	3.16e-298	-	-	-	S	-	-	-	Type I phosphodiesterase / nucleotide pyrophosphatase
NEKLCKCI_01036	1.1e-234	-	-	-	S	-	-	-	Protein of unknown function (DUF3071)
NEKLCKCI_01037	2.45e-63	-	-	-	S	-	-	-	Domain of unknown function (DUF4193)
NEKLCKCI_01038	1.75e-110	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
NEKLCKCI_01039	0.0	relA	2.7.6.5, 3.1.7.2	-	KT	ko:K00951,ko:K01139	ko00230,map00230	ko00000,ko00001,ko01000,ko03009	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NEKLCKCI_01041	3.6e-266	-	-	-	E	-	-	-	Belongs to the peptidase S1B family
NEKLCKCI_01042	1.78e-89	-	-	-	T	-	-	-	Toxic component of a toxin-antitoxin (TA) module
NEKLCKCI_01043	9.55e-66	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
NEKLCKCI_01044	3.89e-118	-	-	-	K	-	-	-	helix-turn-helix
NEKLCKCI_01045	4.33e-161	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
NEKLCKCI_01046	1.74e-253	-	-	-	K	-	-	-	Replication initiation factor
NEKLCKCI_01047	6.67e-43	-	-	-	L	-	-	-	Excisionase from transposon Tn916
NEKLCKCI_01048	4.9e-93	-	-	-	L	-	-	-	COG COG4974 Site-specific recombinase XerD
NEKLCKCI_01049	6.34e-178	-	-	-	L	-	-	-	COG COG4974 Site-specific recombinase XerD
NEKLCKCI_01050	1.98e-133	ppiA	5.2.1.8	-	G	ko:K03767,ko:K03768	ko01503,ko04217,map01503,map04217	ko00000,ko00001,ko01000,ko03110,ko04147	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NEKLCKCI_01051	5.56e-212	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
NEKLCKCI_01053	6.96e-286	-	-	-	S	-	-	-	Peptidase dimerisation domain
NEKLCKCI_01054	0.0	nadE	6.3.5.1	-	H	ko:K01950	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NEKLCKCI_01055	7.81e-52	-	-	-	-	-	-	-	-
NEKLCKCI_01056	0.0	pflB	2.3.1.54	-	C	ko:K00656	ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120	ko00000,ko00001,ko01000	Pyruvate formate lyase-like
NEKLCKCI_01057	5.19e-222	pflA	1.97.1.4	-	C	ko:K04069	-	ko00000,ko01000	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NEKLCKCI_01058	2.98e-144	-	-	-	S	-	-	-	Protein of unknown function (DUF3000)
NEKLCKCI_01059	1.94e-316	rnd	3.1.13.5	-	J	ko:K03684	-	ko00000,ko01000,ko03016	3'-5' exonuclease
NEKLCKCI_01060	9.36e-310	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
NEKLCKCI_01061	0.0	-	-	-	P	ko:K03281	-	ko00000	Voltage gated chloride channel
NEKLCKCI_01062	4.05e-147	clpP1	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
NEKLCKCI_01063	9.32e-164	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
NEKLCKCI_01064	7.12e-311	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
NEKLCKCI_01067	1.82e-298	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I II
NEKLCKCI_01068	8.28e-291	nhaA	-	-	P	ko:K03313	-	ko00000,ko02000	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
NEKLCKCI_01069	4.26e-222	fmt2	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the LOG family
NEKLCKCI_01070	6.09e-152	safC	-	-	S	-	-	-	O-methyltransferase
NEKLCKCI_01071	3.57e-235	sdhB	1.3.5.1, 1.3.5.4	-	C	ko:K00240	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	4Fe-4S dicluster domain
NEKLCKCI_01072	2.23e-93	yraN	-	-	L	ko:K07460	-	ko00000	Belongs to the UPF0102 family
NEKLCKCI_01073	0.0	comM	-	-	O	ko:K07391	-	ko00000	Magnesium chelatase, subunit ChlI C-terminal
NEKLCKCI_01074	1.72e-42	dprA	-	-	LU	ko:K04096	-	ko00000	DNA recombination-mediator protein A
NEKLCKCI_01075	1.71e-307	dprA	-	-	LU	ko:K04096	-	ko00000	DNA recombination-mediator protein A
NEKLCKCI_01076	1.52e-75	-	-	-	L	ko:K07443	-	ko00000	6-O-methylguanine DNA methyltransferase, DNA binding domain
NEKLCKCI_01077	0.0	sdhA	1.3.5.1, 1.3.5.4, 1.4.3.16	-	C	ko:K00239,ko:K00278	ko00020,ko00190,ko00250,ko00650,ko00720,ko00760,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00250,map00650,map00720,map00760,map01100,map01110,map01120,map01130,map01200,map05134	ko00000,ko00001,ko00002,ko01000	Succinate dehydrogenase flavoprotein subunit
NEKLCKCI_01078	3.62e-212	pdxY	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
NEKLCKCI_01079	9.86e-202	-	-	-	S	-	-	-	Putative ABC-transporter type IV
NEKLCKCI_01080	0.0	-	2.5.1.49	-	E	ko:K01740	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	Aminotransferase class-V
NEKLCKCI_01081	9.42e-209	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
NEKLCKCI_01082	0.0	-	-	-	MV	ko:K02004	-	ko00000,ko00002,ko02000	MacB-like periplasmic core domain
NEKLCKCI_01083	0.0	-	-	-	I	-	-	-	PAP2 superfamily
NEKLCKCI_01084	2.92e-171	-	-	-	K	-	-	-	helix_turn_helix, Lux Regulon
NEKLCKCI_01085	0.0	-	-	-	T	-	-	-	Histidine kinase
NEKLCKCI_01086	0.0	pip	3.4.11.5	-	S	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	alpha/beta hydrolase fold
NEKLCKCI_01087	4.99e-182	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
NEKLCKCI_01088	3.08e-215	iaaA	3.4.19.5	-	E	ko:K13051	-	ko00000,ko01000,ko01002	Asparaginase
NEKLCKCI_01089	9.38e-190	-	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	NLPA lipoprotein
NEKLCKCI_01090	2.69e-239	acoA	1.2.4.1	-	C	ko:K00161,ko:K21416	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Dehydrogenase E1 component
NEKLCKCI_01091	3.16e-235	acoB	1.2.4.1, 1.2.4.4	-	C	ko:K00162,ko:K11381,ko:K21417	ko00010,ko00020,ko00280,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00280,map00620,map00640,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Pyruvate 2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit
NEKLCKCI_01092	3.17e-260	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
NEKLCKCI_01093	4.84e-123	-	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
NEKLCKCI_01094	1.04e-291	-	2.6.1.1, 2.6.1.2, 2.6.1.66, 2.6.1.83	-	E	ko:K00812,ko:K08969,ko:K10206,ko:K10907,ko:K14260,ko:K14261	ko00220,ko00250,ko00270,ko00290,ko00300,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00300,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase class I and II
NEKLCKCI_01095	2.92e-257	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
NEKLCKCI_01096	9.38e-312	-	-	-	K	-	-	-	Fic/DOC family
NEKLCKCI_01097	1.92e-162	-	-	-	E	-	-	-	Psort location Cytoplasmic, score 8.87
NEKLCKCI_01098	5.59e-78	yccF	-	-	S	-	-	-	Inner membrane component domain
NEKLCKCI_01099	6.35e-201	-	-	-	J	-	-	-	Methyltransferase domain
NEKLCKCI_01100	6.29e-103	-	-	-	S	-	-	-	Cupin 2, conserved barrel domain protein
NEKLCKCI_01101	0.0	-	-	-	KLT	-	-	-	Protein tyrosine kinase
NEKLCKCI_01102	6.04e-103	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
NEKLCKCI_01104	1.1e-30	-	-	-	-	-	-	-	-
NEKLCKCI_01105	7.74e-264	-	-	-	S	-	-	-	Short C-terminal domain
NEKLCKCI_01106	4.48e-112	-	-	-	S	-	-	-	Helix-turn-helix
NEKLCKCI_01107	7.03e-86	-	-	-	S	-	-	-	Zincin-like metallopeptidase
NEKLCKCI_01108	1.66e-46	-	-	-	S	ko:K07069	-	ko00000	Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
NEKLCKCI_01109	6.57e-66	-	-	-	-	-	-	-	-
NEKLCKCI_01110	1.5e-96	fms	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
NEKLCKCI_01111	5.26e-161	-	-	-	S	ko:K06999	-	ko00000	Phospholipase/Carboxylesterase
NEKLCKCI_01112	0.0	-	2.7.11.1	-	S	ko:K12132	-	ko00000,ko01000,ko01001	PASTA domain
NEKLCKCI_01114	0.0	-	-	-	M	-	-	-	Glycosyltransferase like family 2
NEKLCKCI_01115	3.18e-153	-	-	-	E	-	-	-	haloacid dehalogenase-like hydrolase
NEKLCKCI_01116	2.58e-186	-	-	-	K	-	-	-	Bacterial regulatory helix-turn-helix protein, lysR family
NEKLCKCI_01117	3.71e-239	-	-	-	S	-	-	-	Conserved hypothetical protein 698
NEKLCKCI_01118	4.12e-79	-	-	-	S	ko:K06999	-	ko00000	Phospholipase/Carboxylesterase
NEKLCKCI_01119	6.99e-204	-	-	-	G	-	-	-	Phosphoglycerate mutase family
NEKLCKCI_01120	3.21e-303	rutG	-	-	F	ko:K02824,ko:K03458	-	ko00000,ko02000	Permease family
NEKLCKCI_01121	6.43e-110	-	-	-	K	-	-	-	AraC-like ligand binding domain
NEKLCKCI_01123	1.03e-70	-	-	-	IQ	-	-	-	oxidoreductase activity
NEKLCKCI_01124	2.65e-175	-	-	-	V	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
NEKLCKCI_01125	1.43e-174	-	-	-	V	ko:K02068	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
NEKLCKCI_01126	1.3e-204	tsnR	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NEKLCKCI_01127	1.51e-259	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
NEKLCKCI_01128	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Phenylalanyl-tRNA synthetase beta
NEKLCKCI_01129	6.1e-134	-	-	-	-	-	-	-	-
NEKLCKCI_01130	7.48e-260	argC	1.2.1.38	-	E	ko:K00145	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
NEKLCKCI_01131	2.47e-273	argJ	2.3.1.1, 2.3.1.35	-	E	ko:K00620	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
NEKLCKCI_01132	4.12e-227	argB	2.7.2.8	-	E	ko:K00930	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the acetylglutamate kinase family. ArgB subfamily
NEKLCKCI_01133	4.83e-314	argD	2.6.1.11, 2.6.1.17	-	E	ko:K00821	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase class-III
NEKLCKCI_01134	2.51e-234	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
NEKLCKCI_01135	1.29e-112	argR	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
NEKLCKCI_01136	5.96e-304	argG	6.3.4.5	-	E	ko:K01940	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the argininosuccinate synthase family. Type 1 subfamily
NEKLCKCI_01137	2.21e-47	-	-	-	L	ko:K07483	-	ko00000	Psort location Cytoplasmic, score 8.87
NEKLCKCI_01138	1.74e-75	-	-	-	S	-	-	-	pathogenesis
NEKLCKCI_01139	6.9e-85	-	-	-	-	-	-	-	-
NEKLCKCI_01141	1.71e-116	-	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	DNA topoisomerase
NEKLCKCI_01143	1.13e-108	nanE	5.1.3.9	-	G	ko:K01788	ko00520,map00520	ko00000,ko00001,ko01000	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
NEKLCKCI_01144	1.65e-72	-	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
NEKLCKCI_01145	1.62e-131	-	-	-	S	-	-	-	Protein of unknown function (DUF4127)
NEKLCKCI_01146	2.14e-119	-	-	-	G	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
NEKLCKCI_01147	2.78e-177	rfbP	-	-	M	-	-	-	Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
NEKLCKCI_01148	4.94e-39	-	-	-	U	-	-	-	Drug resistance MFS transporter, drug H antiporter-2 family
NEKLCKCI_01149	0.0	-	-	-	U	-	-	-	Drug resistance MFS transporter, drug H antiporter-2 family
NEKLCKCI_01150	5.91e-297	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
NEKLCKCI_01151	5.2e-173	-	-	-	L	-	-	-	Protein of unknown function (DUF1524)
NEKLCKCI_01152	4.25e-217	-	-	-	S	-	-	-	Oxidoreductase, aldo keto reductase family protein
NEKLCKCI_01154	4.4e-256	-	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
NEKLCKCI_01155	2.44e-130	-	-	-	G	-	-	-	Glycosyl hydrolases family 43
NEKLCKCI_01156	1.14e-218	-	-	-	G	-	-	-	Glycosyl hydrolases family 43
NEKLCKCI_01159	1.35e-142	pdxT	4.3.3.6	-	H	ko:K08681	ko00750,map00750	ko00000,ko00001,ko01000	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
NEKLCKCI_01160	8.26e-199	pdxS	4.3.3.6	-	H	ko:K06215	ko00750,map00750	ko00000,ko00001,ko01000	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
NEKLCKCI_01161	0.0	fadD	6.2.1.3	-	I	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	AMP-binding enzyme
NEKLCKCI_01162	7.62e-258	-	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
NEKLCKCI_01163	1.9e-169	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NEKLCKCI_01164	4.9e-200	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
NEKLCKCI_01165	2.33e-81	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
NEKLCKCI_01166	9.8e-166	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Class II Aldolase and Adducin N-terminal domain
NEKLCKCI_01167	6.29e-220	-	5.1.3.22	-	G	ko:K03079	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Xylose isomerase-like TIM barrel
NEKLCKCI_01168	0.0	-	2.7.1.53	-	G	ko:K00880	ko00040,ko00053,map00040,map00053	ko00000,ko00001,ko01000	FGGY family of carbohydrate kinases, C-terminal domain
NEKLCKCI_01169	1.46e-283	-	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
NEKLCKCI_01170	4.07e-220	-	-	-	K	-	-	-	Putative sugar-binding domain
NEKLCKCI_01172	0.0	-	-	-	P	ko:K02050	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
NEKLCKCI_01173	0.0	-	-	-	P	ko:K02049	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
NEKLCKCI_01174	1e-28	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	Cation transporting ATPase, C-terminus
NEKLCKCI_01175	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	Cation transporting ATPase, C-terminus
NEKLCKCI_01176	4.87e-155	mgtC	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
NEKLCKCI_01178	6.19e-263	-	-	-	-	-	-	-	-
NEKLCKCI_01181	2.09e-272	-	-	-	-	-	-	-	-
NEKLCKCI_01182	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
NEKLCKCI_01185	1.61e-227	-	-	-	S	ko:K07088	-	ko00000	Auxin Efflux Carrier
NEKLCKCI_01186	2.8e-152	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
NEKLCKCI_01187	1.92e-172	rph	2.7.7.56	-	J	ko:K00989	-	ko00000,ko01000,ko03016	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
NEKLCKCI_01188	2.46e-315	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
NEKLCKCI_01191	1.26e-118	ilvN	2.2.1.6	-	E	ko:K01653	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	ACT domain
NEKLCKCI_01192	0.0	ilvB	2.2.1.6	-	H	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Thiamine pyrophosphate enzyme, central domain
NEKLCKCI_01193	1.56e-179	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
NEKLCKCI_01194	2.72e-34	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
NEKLCKCI_01195	2.17e-147	-	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
NEKLCKCI_01196	3.01e-184	-	-	-	-	-	-	-	-
NEKLCKCI_01197	3.67e-105	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
NEKLCKCI_01198	1.04e-76	-	-	-	S	-	-	-	Protein of unknown function (DUF3039)
NEKLCKCI_01199	0.0	yjjK	-	-	S	ko:K15738	-	ko00000,ko02000	ABC transporter
NEKLCKCI_01200	8.06e-175	-	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Peptidase C26
NEKLCKCI_01201	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
NEKLCKCI_01202	2.09e-212	-	-	-	P	-	-	-	Cation efflux family
NEKLCKCI_01203	0.0	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
NEKLCKCI_01204	6.97e-285	-	-	-	S	-	-	-	Endonuclease/Exonuclease/phosphatase family
NEKLCKCI_01205	1.36e-131	-	-	-	S	ko:K06895	-	ko00000,ko02000	LysE type translocator
NEKLCKCI_01206	0.0	-	-	-	EK	ko:K05825,ko:K18907	ko00300,ko01100,ko01130,ko01210,map00300,map01100,map01130,map01210	ko00000,ko00001,ko00002,ko01000,ko01504,ko03000	Alanine-glyoxylate amino-transferase
NEKLCKCI_01207	2.4e-80	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
NEKLCKCI_01208	3.56e-47	-	-	-	S	ko:K06960	-	ko00000	Belongs to the UPF0109 family
NEKLCKCI_01209	9.23e-139	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
NEKLCKCI_01210	1.37e-223	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
NEKLCKCI_01211	1.25e-106	-	-	-	O	-	-	-	Hsp20/alpha crystallin family
NEKLCKCI_01212	2.16e-136	-	-	-	S	ko:K07078	-	ko00000	Nitroreductase family
NEKLCKCI_01213	4.41e-155	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	Conserved hypothetical protein 95
NEKLCKCI_01214	0.0	-	-	-	U	ko:K06956	-	ko00000	Sodium:dicarboxylate symporter family
NEKLCKCI_01215	0.0	-	-	-	-	-	-	-	-
NEKLCKCI_01218	3.02e-279	steT	-	-	E	ko:K03294	-	ko00000	amino acid
NEKLCKCI_01219	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	helicase superfamily c-terminal domain
NEKLCKCI_01220	7.42e-41	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal L28 family
NEKLCKCI_01221	2.69e-256	-	-	-	G	-	-	-	pfkB family carbohydrate kinase
NEKLCKCI_01223	2.47e-308	-	-	-	S	ko:K06902	ko04138,map04138	ko00000,ko00001,ko02000,ko04131	Vacuole effluxer Atg22 like
NEKLCKCI_01224	1.36e-104	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
NEKLCKCI_01226	1.77e-72	-	-	-	L	-	-	-	RelB antitoxin
NEKLCKCI_01227	4.24e-92	-	-	-	-	-	-	-	-
NEKLCKCI_01228	6.85e-151	-	2.1.1.72	-	L	ko:K07319	-	ko00000,ko01000,ko02048	Belongs to the N(4) N(6)-methyltransferase family
NEKLCKCI_01229	4.26e-29	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
NEKLCKCI_01230	4.71e-241	-	-	-	L	-	-	-	Transposase
NEKLCKCI_01231	7.26e-43	-	-	-	I	-	-	-	carboxylic ester hydrolase activity
NEKLCKCI_01232	1.35e-286	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
NEKLCKCI_01233	6.29e-162	tam	2.1.1.144	-	S	ko:K00598	-	ko00000,ko01000	Methyltransferase domain
NEKLCKCI_01238	0.00013	-	-	-	TV	ko:K05792	-	ko00000	HNH endonuclease
NEKLCKCI_01239	0.0	fadD3	6.2.1.3	-	I	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	AMP-binding enzyme
NEKLCKCI_01240	2.76e-55	-	-	-	K	-	-	-	Transcriptional regulator
NEKLCKCI_01243	7.27e-25	-	-	-	M	-	-	-	Belongs to the glycosyl hydrolase 28 family
NEKLCKCI_01244	1.67e-295	-	2.6.1.1	-	E	ko:K11358	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	Psort location Cytoplasmic, score 8.87
NEKLCKCI_01245	1.37e-306	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.87
NEKLCKCI_01246	1.51e-153	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
NEKLCKCI_01247	1.04e-169	-	-	-	M	-	-	-	Mechanosensitive ion channel
NEKLCKCI_01248	0.0	clpB	-	-	O	ko:K03695,ko:K03696	ko01100,ko04213,map01100,map04213	ko00000,ko00001,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
NEKLCKCI_01250	8.13e-199	-	-	-	Q	-	-	-	Fumarylacetoacetate (FAA) hydrolase family
NEKLCKCI_01251	2.21e-198	-	-	-	S	-	-	-	Domain of unknown function (DUF4854)
NEKLCKCI_01252	6.52e-271	-	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
NEKLCKCI_01253	0.0	-	-	-	M	-	-	-	LPXTG cell wall anchor motif
NEKLCKCI_01254	0.0	-	-	-	M	-	-	-	domain protein
NEKLCKCI_01255	2.45e-70	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Acylphosphatase
NEKLCKCI_01256	2.58e-190	-	-	-	S	ko:K06997	-	ko00000	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
NEKLCKCI_01257	8.22e-236	gluQ	6.1.1.17	-	J	ko:K01885	ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
NEKLCKCI_01258	3.2e-176	-	-	-	M	-	-	-	Protein of unknown function (DUF3152)
NEKLCKCI_01259	3.99e-176	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
NEKLCKCI_01261	3.4e-90	-	-	-	E	-	-	-	Domain of unknown function (DUF5011)
NEKLCKCI_01262	1.22e-53	-	-	-	S	-	-	-	Parallel beta-helix repeats
NEKLCKCI_01265	6.71e-92	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
NEKLCKCI_01266	1.51e-48	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
NEKLCKCI_01267	7.91e-111	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Single-stranded DNA-binding protein
NEKLCKCI_01268	6.47e-64	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
NEKLCKCI_01269	1.49e-245	-	-	-	T	-	-	-	Pfam Adenylate and Guanylate cyclase catalytic domain
NEKLCKCI_01270	5.55e-165	-	-	-	-	-	-	-	-
NEKLCKCI_01271	0.0	-	-	-	D	-	-	-	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
NEKLCKCI_01272	5.34e-244	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NEKLCKCI_01273	0.0	-	3.2.1.97	GH101	G	ko:K17624	-	ko00000,ko01000	Glycosyl hydrolase 101 beta sandwich domain
NEKLCKCI_01274	4.46e-255	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Glycerophosphoryl diester phosphodiesterase family
NEKLCKCI_01275	7.45e-280	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
NEKLCKCI_01276	1.38e-227	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
NEKLCKCI_01277	1.27e-221	plsC2	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Phosphate acyltransferases
NEKLCKCI_01278	5.02e-161	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
NEKLCKCI_01279	4.95e-44	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
NEKLCKCI_01281	2.89e-294	aspC	2.6.1.1	-	E	ko:K00812	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	DegT/DnrJ/EryC1/StrS aminotransferase family
NEKLCKCI_01282	2.13e-256	proB	2.7.2.11	-	E	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
NEKLCKCI_01283	0.0	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
NEKLCKCI_01284	7.66e-275	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
NEKLCKCI_01285	2.12e-53	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal L27 protein
NEKLCKCI_01286	1.44e-62	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
NEKLCKCI_01287	0.0	rne	3.1.26.12	-	J	ko:K08300,ko:K08301	ko03018,map03018	ko00000,ko00001,ko00002,ko01000,ko03009,ko03019	Ribonuclease E/G family
NEKLCKCI_01288	4.04e-304	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Peptidase dimerisation domain
NEKLCKCI_01289	5.52e-214	-	-	-	S	ko:K07088	-	ko00000	Transporter, auxin efflux carrier (AEC) family protein
NEKLCKCI_01290	0.0	-	-	-	V	-	-	-	Efflux ABC transporter, permease protein
NEKLCKCI_01291	1.31e-209	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
NEKLCKCI_01292	8.09e-76	-	-	-	-	-	-	-	-
NEKLCKCI_01293	1.57e-84	-	-	-	-	-	-	-	-
NEKLCKCI_01294	0.0	maf	-	-	DF	ko:K06287	-	ko00000	Maf-like protein
NEKLCKCI_01295	5.51e-239	thrB	2.7.1.39	-	E	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
NEKLCKCI_01296	6.26e-305	hom	1.1.1.3, 2.7.2.4	-	E	ko:K00003,ko:K12524	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Homoserine dehydrogenase
NEKLCKCI_01297	0.0	nagE	2.7.1.193	-	G	ko:K02802,ko:K02803,ko:K02804	ko00520,ko02060,map00520,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
NEKLCKCI_01298	5.94e-107	-	2.7.1.208	-	G	ko:K02777,ko:K20107,ko:K20108	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
NEKLCKCI_01299	0.0	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
NEKLCKCI_01300	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
NEKLCKCI_01301	5.58e-230	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Glycerophosphoryl diester phosphodiesterase family
NEKLCKCI_01302	2.69e-82	psp1	3.5.99.10	-	J	ko:K09022	-	ko00000,ko01000	Endoribonuclease L-PSP
NEKLCKCI_01303	1.08e-258	gnpA	2.4.1.211	-	S	ko:K15533	-	ko00000,ko01000	Lacto-N-biose phosphorylase C-terminal domain
NEKLCKCI_01306	2.18e-211	-	1.1.1.100, 1.1.1.413	-	IQ	ko:K00059,ko:K18333,ko:K22322	ko00051,ko00061,ko00333,ko00780,ko01040,ko01100,ko01120,ko01130,ko01212,map00051,map00061,map00333,map00780,map01040,map01100,map01120,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	KR domain
NEKLCKCI_01307	1.34e-85	-	4.2.1.68	-	M	ko:K18334	ko00051,ko01120,map00051,map01120	ko00000,ko00001,ko01000	Enolase C-terminal domain-like
NEKLCKCI_01308	2.02e-26	-	4.2.1.68	-	M	ko:K18334	ko00051,ko01120,map00051,map01120	ko00000,ko00001,ko01000	carboxylic acid catabolic process
NEKLCKCI_01309	2.41e-236	-	-	-	K	ko:K02529	-	ko00000,ko03000	Bacterial regulatory proteins, lacI family
NEKLCKCI_01311	1.65e-153	-	-	-	S	-	-	-	CYTH
NEKLCKCI_01312	1.03e-213	ybbN	-	-	O	ko:K05838	-	ko00000,ko03110	Tetratricopeptide repeat
NEKLCKCI_01313	8.35e-232	-	-	-	-	-	-	-	-
NEKLCKCI_01314	9.86e-241	-	-	-	-	-	-	-	-
NEKLCKCI_01315	4.41e-223	-	5.2.1.8	-	M	ko:K01802	-	ko00000,ko01000	FKBP-type peptidyl-prolyl cis-trans isomerase
NEKLCKCI_01316	1.23e-159	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
NEKLCKCI_01317	1.43e-95	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
NEKLCKCI_01318	1.61e-186	-	-	-	-	-	-	-	-
NEKLCKCI_01319	1.02e-170	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
NEKLCKCI_01320	1.05e-292	-	-	-	G	-	-	-	Transmembrane secretion effector
NEKLCKCI_01321	0.0	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NEKLCKCI_01322	3.04e-280	pyr	1.3.98.1	-	F	ko:K00226	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Dihydroorotate dehydrogenase
NEKLCKCI_01323	5.2e-253	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
NEKLCKCI_01325	0.0	-	-	-	KL	-	-	-	Psort location Cytoplasmic, score 8.87
NEKLCKCI_01326	3.31e-171	leuD	4.2.1.33, 4.2.1.35	-	E	ko:K01704	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
NEKLCKCI_01327	0.0	leuC	4.2.1.33, 4.2.1.35	-	E	ko:K01703	ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
NEKLCKCI_01328	1.59e-179	ltbR	-	-	K	-	-	-	Transcriptional regulator, IclR family, C-terminal domain protein
NEKLCKCI_01329	9.69e-317	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
NEKLCKCI_01332	3.37e-88	-	-	-	S	ko:K07133	-	ko00000	Domain of unknown function (DUF4143)
NEKLCKCI_01333	1.4e-127	-	-	-	S	ko:K07133	-	ko00000	Domain of unknown function (DUF4143)
NEKLCKCI_01334	0.0	gltX	6.1.1.17	-	J	ko:K01885	ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NEKLCKCI_01336	1.65e-159	-	-	-	S	-	-	-	HAD hydrolase, family IA, variant 3
NEKLCKCI_01337	1.45e-257	-	-	-	P	-	-	-	NMT1/THI5 like
NEKLCKCI_01338	4.1e-178	-	-	-	P	-	-	-	Binding-protein-dependent transport system inner membrane component
NEKLCKCI_01339	9.25e-198	-	-	-	-	-	-	-	-
NEKLCKCI_01340	9.49e-163	-	-	-	G	-	-	-	Phosphoglycerate mutase family
NEKLCKCI_01341	0.0	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
NEKLCKCI_01342	6.15e-127	-	-	-	S	-	-	-	GtrA-like protein
NEKLCKCI_01343	9.48e-83	-	-	-	S	-	-	-	Macrophage migration inhibitory factor (MIF)
NEKLCKCI_01344	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Formate-tetrahydrofolate ligase
NEKLCKCI_01345	0.0	pepD	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Peptidase family C69
NEKLCKCI_01346	3.03e-139	-	-	-	S	ko:K06910	-	ko00000	Phosphatidylethanolamine-binding protein
NEKLCKCI_01347	0.0	-	3.2.1.51	GH95	G	ko:K15923	ko00511,map00511	ko00000,ko00001,ko01000	Glycosyl hydrolase family 65, N-terminal domain
NEKLCKCI_01348	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter transmembrane region
NEKLCKCI_01349	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter, ATP-binding protein
NEKLCKCI_01350	8.73e-122	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
NEKLCKCI_01351	2.3e-58	-	-	-	S	-	-	-	Protein of unknown function (DUF1778)
NEKLCKCI_01352	2.2e-244	-	-	-	C	-	-	-	Aldo/keto reductase family
NEKLCKCI_01353	2.95e-126	-	-	-	M	-	-	-	Belongs to the glycosyl hydrolase 30 family
NEKLCKCI_01354	4.45e-21	-	-	-	-	-	-	-	-
NEKLCKCI_01356	3.1e-113	-	-	-	-	-	-	-	-
NEKLCKCI_01358	8.66e-121	-	-	-	-	-	-	-	-
NEKLCKCI_01359	7.13e-56	-	-	-	O	-	-	-	Glutaredoxin
NEKLCKCI_01360	3.2e-191	-	-	-	S	ko:K07058	-	ko00000	Virulence factor BrkB
NEKLCKCI_01361	5.61e-127	bcp	1.11.1.15	-	O	ko:K03564	-	ko00000,ko01000	Redoxin
NEKLCKCI_01362	3.79e-52	urtE	-	-	E	ko:K11963	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
NEKLCKCI_01363	3.17e-149	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
NEKLCKCI_01364	2.21e-109	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
NEKLCKCI_01365	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
NEKLCKCI_01366	4.31e-166	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
NEKLCKCI_01367	2.46e-132	-	-	-	K	-	-	-	Transcriptional regulator C-terminal region
NEKLCKCI_01368	0.0	aroP	-	-	E	ko:K03293,ko:K11732	-	ko00000,ko02000	aromatic amino acid transport protein AroP K03293
NEKLCKCI_01369	0.0	lacZ	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.87
NEKLCKCI_01370	4.01e-235	-	-	-	S	-	-	-	Protein of unknown function (DUF559)
NEKLCKCI_01371	7.18e-260	ilvC	1.1.1.86	-	H	ko:K00053	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
NEKLCKCI_01372	6.15e-261	ilvC	1.1.1.86	-	H	ko:K00053	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
NEKLCKCI_01373	0.0	-	-	-	EGP	-	-	-	Sugar (and other) transporter
NEKLCKCI_01374	0.0	scrT	-	-	G	-	-	-	Transporter major facilitator family protein
NEKLCKCI_01375	1.89e-100	gtfA	2.4.1.7	GH13	G	ko:K00690	ko00500,map00500	ko00000,ko00001,ko01000	Domain of unknown function (DUF1964)
NEKLCKCI_01376	1.91e-255	-	-	-	K	ko:K03484	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
NEKLCKCI_01377	3.43e-79	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NEKLCKCI_01378	3.06e-211	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NEKLCKCI_01379	0.0	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
NEKLCKCI_01380	2.17e-253	fbaA	4.1.2.13	-	G	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-bisphosphate aldolase class-II
NEKLCKCI_01381	0.0	-	3.2.1.8, 3.5.1.104	-	G	ko:K01181,ko:K22278	-	ko00000,ko01000	Polysaccharide deacetylase
NEKLCKCI_01382	1.42e-74	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
NEKLCKCI_01384	1.57e-64	-	-	-	E	-	-	-	IrrE N-terminal-like domain
NEKLCKCI_01385	1.61e-82	-	-	-	-	-	-	-	-
NEKLCKCI_01386	4.37e-80	-	-	-	-	-	-	-	-
NEKLCKCI_01388	3.76e-163	-	-	-	S	-	-	-	Domain of unknown function (DUF4417)
NEKLCKCI_01389	1.23e-55	-	-	-	S	-	-	-	Bacterial mobilisation protein (MobC)
NEKLCKCI_01390	0.0	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
NEKLCKCI_01392	2.19e-219	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
NEKLCKCI_01393	0.0	fprA	1.18.1.2, 1.19.1.1	-	C	ko:K00528	-	ko00000,ko01000	Pyridine nucleotide-disulphide oxidoreductase
NEKLCKCI_01394	0.0	-	3.6.3.4, 3.6.3.54	-	P	ko:K01533,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	E1-E2 ATPase
NEKLCKCI_01395	0.0	degP	-	-	O	ko:K08372	ko02020,map02020	ko00000,ko00001,ko01000,ko01002	Domain present in PSD-95, Dlg, and ZO-1/2.
NEKLCKCI_01396	0.0	tgt	2.4.2.29	-	F	ko:K00773	-	ko00000,ko01000,ko03016	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
NEKLCKCI_01398	4.51e-110	-	-	-	Q	-	-	-	Acetyltransferase (GNAT) domain
NEKLCKCI_01399	1.58e-199	-	-	-	I	-	-	-	Serine aminopeptidase, S33
NEKLCKCI_01400	1.75e-69	-	-	-	S	-	-	-	Putative heavy-metal-binding
NEKLCKCI_01401	1.67e-62	-	-	-	-	-	-	-	-
NEKLCKCI_01402	1.15e-116	mutT	3.6.1.55	-	L	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
NEKLCKCI_01403	0.0	-	-	-	KL	-	-	-	Domain of unknown function (DUF3427)
NEKLCKCI_01405	4.98e-252	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
NEKLCKCI_01407	1.11e-145	-	-	-	-	-	-	-	-
NEKLCKCI_01408	3.78e-215	-	-	-	EG	-	-	-	EamA-like transporter family
NEKLCKCI_01409	1.7e-263	pldB	3.1.1.5	-	I	ko:K01048	ko00564,map00564	ko00000,ko00001,ko01000	Serine aminopeptidase, S33
NEKLCKCI_01410	0.0	-	-	-	S	ko:K01421	-	ko00000	YhgE Pip domain protein
NEKLCKCI_01411	0.0	-	-	-	S	ko:K01421	-	ko00000	YhgE Pip domain protein
NEKLCKCI_01412	0.0	pepX	3.4.14.5	-	E	ko:K01278	ko04974,map04974	ko00000,ko00001,ko01000,ko01002,ko04090,ko04147	Dipeptidyl peptidase IV (DPP IV) N-terminal region
NEKLCKCI_01413	3.69e-167	fhaA	-	-	T	-	-	-	Protein of unknown function (DUF2662)
NEKLCKCI_01414	1.44e-122	fhaB	-	-	T	-	-	-	Inner membrane component of T3SS, cytoplasmic domain
NEKLCKCI_01415	0.0	pstP	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	Sigma factor PP2C-like phosphatases
NEKLCKCI_01416	0.0	rodA	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
NEKLCKCI_01417	0.0	pbpA	-	-	M	ko:K05364	ko00550,map00550	ko00000,ko00001,ko01011	penicillin-binding protein
NEKLCKCI_01418	5.69e-234	pknA	2.7.11.1	-	T	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	Protein tyrosine kinase
NEKLCKCI_01419	0.0	pknB	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	Protein tyrosine kinase
NEKLCKCI_01420	9.5e-156	trpG	2.6.1.85, 4.1.3.27	-	EH	ko:K01658,ko:K01664	ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	para-aminobenzoate synthase glutamine amidotransferase component II
NEKLCKCI_01421	5.65e-296	srtB	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
NEKLCKCI_01422	2.05e-183	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF881)
NEKLCKCI_01423	8.05e-100	crgA	-	-	D	-	-	-	Involved in cell division
NEKLCKCI_01424	0.0	-	-	-	L	-	-	-	ribosomal rna small subunit methyltransferase
NEKLCKCI_01425	2.4e-186	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Rhomboid family
NEKLCKCI_01426	7.68e-47	-	-	-	-	-	-	-	-
NEKLCKCI_01427	0.0	glgP	2.4.1.1	GT35	G	ko:K00688	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	ko00000,ko00001,ko01000	Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
NEKLCKCI_01428	2.26e-95	-	-	-	I	-	-	-	Sterol carrier protein
NEKLCKCI_01429	1.49e-51	-	-	-	V	ko:K06147	-	ko00000,ko02000	ATPases associated with a variety of cellular activities
NEKLCKCI_01430	3.5e-57	-	-	-	L	ko:K07485	-	ko00000	Transposase
NEKLCKCI_01431	6.48e-14	istB	-	-	L	-	-	-	IstB-like ATP binding protein
NEKLCKCI_01432	7.04e-57	-	-	-	L	-	-	-	Integrase core domain
NEKLCKCI_01433	0.0	-	-	-	U	-	-	-	Drug resistance MFS transporter, drug H antiporter-2 family
NEKLCKCI_01434	1.9e-17	-	-	-	-	-	-	-	-
NEKLCKCI_01435	9.57e-151	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
NEKLCKCI_01436	1.78e-28	-	-	-	G	-	-	-	Transmembrane secretion effector
NEKLCKCI_01437	2.23e-189	-	-	-	L	ko:K07448	-	ko00000,ko02048	Restriction endonuclease
NEKLCKCI_01438	1.61e-40	-	-	-	-	-	-	-	-
NEKLCKCI_01439	8.54e-126	-	-	-	E	-	-	-	Rard protein
NEKLCKCI_01440	3.98e-228	-	-	-	I	-	-	-	alpha/beta hydrolase fold
NEKLCKCI_01441	8.16e-265	trmI	2.1.1.219, 2.1.1.220	-	J	ko:K07442	-	ko00000,ko01000,ko03016	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
NEKLCKCI_01442	2.04e-129	sixA	-	-	T	ko:K08296	-	ko00000,ko01000	Phosphoglycerate mutase family
NEKLCKCI_01443	0.0	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
NEKLCKCI_01444	1.59e-206	metF	1.5.1.20	-	E	ko:K00297	ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523	ko00000,ko00001,ko00002,ko01000	Methylenetetrahydrofolate reductase
NEKLCKCI_01446	0.0	glnE	2.7.7.42, 2.7.7.89	-	H	ko:K00982	-	ko00000,ko01000	Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
NEKLCKCI_01447	2.23e-233	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
NEKLCKCI_01448	1.83e-96	pyrI	-	-	F	ko:K00610	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002	Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
NEKLCKCI_01449	0.0	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
NEKLCKCI_01450	3.67e-227	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the OMP decarboxylase family. Type 2 subfamily
NEKLCKCI_01451	8.79e-201	pyrK	-	-	C	ko:K02823	ko00240,ko01100,map00240,map01100	ko00000,ko00001	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
NEKLCKCI_01452	7.1e-230	pyrD	1.3.1.14	-	F	ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
NEKLCKCI_01453	7.11e-160	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
NEKLCKCI_01454	2.51e-31	-	-	-	K	-	-	-	MerR family regulatory protein
NEKLCKCI_01455	2.1e-246	adh	1.1.1.1	-	C	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Zinc-binding dehydrogenase
NEKLCKCI_01456	1.82e-218	-	-	-	-	-	-	-	-
NEKLCKCI_01457	1.4e-22	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
NEKLCKCI_01458	9.5e-19	-	-	-	KLT	-	-	-	Protein tyrosine kinase
NEKLCKCI_01459	0.0	uvrA3	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
NEKLCKCI_01460	5.78e-304	-	-	-	V	-	-	-	MatE
NEKLCKCI_01461	4.85e-169	-	-	-	S	-	-	-	Enoyl-(Acyl carrier protein) reductase
NEKLCKCI_01462	1.02e-171	-	-	-	L	ko:K07457	-	ko00000	endonuclease III
NEKLCKCI_01463	2.51e-120	-	-	-	K	-	-	-	Transcriptional regulator PadR-like family
NEKLCKCI_01464	9.3e-226	-	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
NEKLCKCI_01465	8.87e-89	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Cupin domain
NEKLCKCI_01466	4.89e-285	-	2.7.11.1	-	S	ko:K07154	-	ko00000,ko01000,ko01001,ko02048	HipA N-terminal domain
NEKLCKCI_01467	1.17e-54	-	-	-	K	-	-	-	Helix-turn-helix
NEKLCKCI_01468	1.02e-64	tam	2.1.1.144, 2.1.1.197	-	FG	ko:K00598,ko:K02169	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	trans-aconitate 2-methyltransferase activity
NEKLCKCI_01469	6.5e-25	-	-	-	-	-	-	-	-
NEKLCKCI_01470	1.66e-131	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
NEKLCKCI_01471	3.22e-119	-	-	-	T	-	-	-	Domain of unknown function (DUF4234)
NEKLCKCI_01472	1.23e-221	-	-	-	K	-	-	-	Bacterial regulatory helix-turn-helix protein, lysR family
NEKLCKCI_01473	6.72e-158	-	3.8.1.2	-	S	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
NEKLCKCI_01474	0.0	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
NEKLCKCI_01475	1.69e-182	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
NEKLCKCI_01476	2.56e-115	dkg	-	-	S	-	-	-	Oxidoreductase, aldo keto reductase family protein
NEKLCKCI_01478	0.0	ugp	2.7.7.9	-	G	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
NEKLCKCI_01479	0.0	-	-	-	K	-	-	-	WYL domain
NEKLCKCI_01480	2.14e-69	-	-	-	-	-	-	-	-
NEKLCKCI_01481	0.0	helY	-	-	L	ko:K03727	-	ko00000,ko01000	DEAD DEAH box helicase
NEKLCKCI_01482	1.11e-81	rbpA	-	-	K	-	-	-	Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
NEKLCKCI_01483	2.42e-182	nt5e	3.1.3.18	-	S	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	HAD-hyrolase-like
NEKLCKCI_01485	3.01e-117	-	-	-	K	-	-	-	Putative zinc ribbon domain
NEKLCKCI_01486	4.36e-162	-	-	-	S	-	-	-	GyrI-like small molecule binding domain
NEKLCKCI_01487	2.67e-22	-	-	-	L	-	-	-	DNA integration
NEKLCKCI_01489	8.13e-82	-	-	-	-	-	-	-	-
NEKLCKCI_01490	1.19e-154	merR2	-	-	K	-	-	-	helix_turn_helix, mercury resistance
NEKLCKCI_01491	2.88e-96	garA	-	-	T	-	-	-	Inner membrane component of T3SS, cytoplasmic domain
NEKLCKCI_01492	4.58e-181	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF881)
NEKLCKCI_01493	2.78e-57	sbp	-	-	S	-	-	-	Protein of unknown function (DUF1290)
NEKLCKCI_01494	2.27e-222	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF881)
NEKLCKCI_01495	2.22e-151	pgsA2	2.7.8.41, 2.7.8.5	-	I	ko:K00995,ko:K08744	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NEKLCKCI_01496	1.07e-200	hisG	2.4.2.17	-	F	ko:K00765,ko:K02502	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	ATP phosphoribosyltransferase
NEKLCKCI_01497	1.2e-54	hisE	3.6.1.31	-	E	ko:K01523	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Phosphoribosyl-ATP pyrophosphohydrolase
NEKLCKCI_01498	8.92e-144	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribulose-phosphate 3-epimerase
NEKLCKCI_01499	1.12e-246	lgt	-	-	M	-	-	-	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
NEKLCKCI_01500	2.26e-210	trpA	4.2.1.20	-	E	ko:K01695	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
NEKLCKCI_01501	0.0	trpB	4.2.1.20	-	E	ko:K01696	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
NEKLCKCI_01502	0.0	der	-	-	F	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
NEKLCKCI_01503	9.44e-187	rluB	5.4.99.19, 5.4.99.22	-	J	ko:K06178,ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
NEKLCKCI_01504	1.15e-165	-	-	-	U	ko:K06188	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
NEKLCKCI_01505	5.17e-56	-	-	-	-	-	-	-	-
NEKLCKCI_01506	0.0	purH	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	Bifunctional purine biosynthesis protein PurH
NEKLCKCI_01507	1.84e-316	-	-	-	-	-	-	-	-
NEKLCKCI_01508	9.52e-212	sucD	6.2.1.5	-	C	ko:K01902	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
NEKLCKCI_01509	2.34e-284	sucC	6.2.1.5	-	F	ko:K01903	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
NEKLCKCI_01510	3.9e-131	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
NEKLCKCI_01511	3.73e-72	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase subunit
NEKLCKCI_01512	6.91e-259	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
NEKLCKCI_01513	2.6e-135	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
NEKLCKCI_01515	2.64e-129	ruvC	3.1.22.4	-	L	ko:K01159	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
NEKLCKCI_01516	2.79e-176	yebC	-	-	K	-	-	-	transcriptional regulatory protein
NEKLCKCI_01517	0.0	-	3.2.1.52	GH20	M	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain
NEKLCKCI_01518	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
NEKLCKCI_01519	0.0	-	-	-	U	ko:K06956	-	ko00000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
NEKLCKCI_01522	0.0	-	-	-	-	-	-	-	-
NEKLCKCI_01526	3.94e-197	-	-	-	S	-	-	-	PAC2 family
NEKLCKCI_01527	8.18e-216	uppP	3.6.1.27	-	V	ko:K06153	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
NEKLCKCI_01528	4.73e-203	-	-	-	G	-	-	-	Fructosamine kinase
NEKLCKCI_01529	6.31e-273	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
NEKLCKCI_01530	1.54e-274	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
NEKLCKCI_01531	0.0	tkt	2.2.1.1	-	H	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the transketolase family
NEKLCKCI_01532	4.49e-258	tal	2.2.1.2	-	H	ko:K00616	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
NEKLCKCI_01533	1.27e-181	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
NEKLCKCI_01534	0.0	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
NEKLCKCI_01537	6.06e-308	-	-	-	V	-	-	-	MatE
NEKLCKCI_01538	2.44e-208	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
NEKLCKCI_01539	1.23e-227	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily
NEKLCKCI_01540	1.2e-45	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase SecG subunit
NEKLCKCI_01541	3.84e-189	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
NEKLCKCI_01542	6.71e-284	pgk	2.7.2.3, 5.3.1.1	-	F	ko:K00927,ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Phosphoglycerate kinase
NEKLCKCI_01543	3.23e-222	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
NEKLCKCI_01544	4.29e-227	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
NEKLCKCI_01545	3.03e-230	aroE	1.1.1.25	-	E	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Shikimate dehydrogenase substrate binding domain
NEKLCKCI_01546	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
NEKLCKCI_01547	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
NEKLCKCI_01548	2.22e-111	-	-	-	-	-	-	-	-
NEKLCKCI_01549	5.17e-76	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	MacB-like periplasmic core domain
NEKLCKCI_01550	1.23e-150	-	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
NEKLCKCI_01551	0.0	-	2.7.13.3	-	T	ko:K18351	ko01502,ko02020,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko01504,ko02022	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NEKLCKCI_01552	6.89e-180	-	3.4.17.14	-	M	ko:K07260	ko00550,ko01100,ko01502,ko02020,map00550,map01100,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	D-alanyl-D-alanine carboxypeptidase
NEKLCKCI_01553	0.0	ybiT	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter
NEKLCKCI_01554	8.31e-254	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
NEKLCKCI_01555	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
NEKLCKCI_01556	1.41e-263	-	2.7.1.162	-	S	ko:K13059	-	ko00000,ko01000	Phosphotransferase enzyme family
NEKLCKCI_01557	5.23e-277	-	-	-	GK	-	-	-	ROK family
NEKLCKCI_01558	4.48e-228	-	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
NEKLCKCI_01559	1.51e-264	gnpA	2.4.1.211	-	S	ko:K15533	-	ko00000,ko01000	Lacto-N-biose phosphorylase C-terminal domain
NEKLCKCI_01560	3.73e-213	-	-	-	G	ko:K02026	-	ko00000,ko00002,ko02000	ABC transporter permease
NEKLCKCI_01561	3.23e-222	-	-	-	G	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
NEKLCKCI_01562	2.22e-313	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
NEKLCKCI_01563	0.0	trpE	4.1.3.27	-	E	ko:K01657	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
NEKLCKCI_01564	6.57e-97	hisI	3.5.4.19, 3.6.1.31	-	E	ko:K01496,ko:K11755	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
NEKLCKCI_01565	1.82e-179	hisF	4.1.3.27	-	E	ko:K01657,ko:K02500	ko00340,ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00340,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
NEKLCKCI_01566	2.19e-291	rlmN	2.1.1.192	-	J	ko:K06941	-	ko00000,ko01000,ko03009	Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
NEKLCKCI_01567	1.27e-226	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Cytidylyltransferase family
NEKLCKCI_01568	1.08e-119	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
NEKLCKCI_01569	6.31e-171	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
NEKLCKCI_01570	1.29e-163	-	-	-	S	-	-	-	alpha beta
NEKLCKCI_01571	4.78e-188	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
NEKLCKCI_01572	3.07e-188	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
NEKLCKCI_01573	4.26e-113	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
NEKLCKCI_01574	0.0	fadD3	6.2.1.3	-	I	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	long-chain-fatty acid CoA ligase
NEKLCKCI_01575	3.59e-118	-	-	-	-	-	-	-	-
NEKLCKCI_01576	1.59e-255	guaB3	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	IMP dehydrogenase family protein
NEKLCKCI_01577	1.35e-306	icd	1.1.1.42	-	C	ko:K00031	ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146	br01601,ko00000,ko00001,ko00002,ko01000	Belongs to the isocitrate and isopropylmalate dehydrogenases family
NEKLCKCI_01578	0.0	-	-	-	G	-	-	-	ABC transporter substrate-binding protein
NEKLCKCI_01579	0.0	fadD1	6.2.1.3	-	I	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	AMP-binding enzyme
NEKLCKCI_01580	4.88e-169	-	-	-	M	-	-	-	Peptidase family M23
NEKLCKCI_01582	1.61e-250	tsaD	2.3.1.234	-	O	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
NEKLCKCI_01583	4.23e-135	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	FR47-like protein
NEKLCKCI_01584	9.87e-204	yeaZ	-	-	O	ko:K14742	-	ko00000,ko03016	Glycoprotease family
NEKLCKCI_01585	3.13e-153	tsaE	-	-	S	ko:K06925	-	ko00000,ko03016	Threonylcarbamoyl adenosine biosynthesis protein TsaE
NEKLCKCI_01586	2.59e-232	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
NEKLCKCI_01587	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein
NEKLCKCI_01588	4.93e-161	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Helix-hairpin-helix motif
NEKLCKCI_01589	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
NEKLCKCI_01590	3.75e-214	-	-	-	ET	ko:K10005	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial periplasmic substrate-binding proteins
NEKLCKCI_01591	1.72e-218	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
NEKLCKCI_01592	1.72e-208	gpmB	3.1.3.85, 5.4.2.11	-	G	ko:K01834,ko:K22306	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Phosphoglycerate mutase family
NEKLCKCI_01593	0.0	-	-	-	E	-	-	-	Serine carboxypeptidase
NEKLCKCI_01594	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.87
NEKLCKCI_01595	5.73e-183	-	-	-	S	-	-	-	Domain of unknown function (DUF4194)
NEKLCKCI_01596	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.87
NEKLCKCI_01597	7.28e-208	nfo	3.1.21.2	-	L	ko:K01151	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
NEKLCKCI_01598	9.61e-84	-	-	-	K	-	-	-	Protein of unknown function, DUF488
NEKLCKCI_01599	1.3e-161	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
NEKLCKCI_01600	5.39e-117	-	-	-	K	-	-	-	FR47-like protein
NEKLCKCI_01601	5.46e-74	-	-	-	K	-	-	-	Transcriptional regulator
NEKLCKCI_01602	1.32e-47	-	-	-	F	-	-	-	Hydrolase of X-linked nucleoside diphosphate N terminal
NEKLCKCI_01603	7.27e-28	-	-	-	S	-	-	-	Carbon-nitrogen hydrolase
NEKLCKCI_01605	2.82e-235	-	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
NEKLCKCI_01606	3.13e-100	qseC	2.7.13.3	-	T	ko:K02484,ko:K07637,ko:K07643,ko:K07645,ko:K07649,ko:K07653,ko:K18351	ko01502,ko01503,ko02020,ko02024,map01502,map01503,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko01504,ko02022	Histidine kinase
NEKLCKCI_01607	5.69e-170	-	-	-	S	-	-	-	SOS response associated peptidase (SRAP)
NEKLCKCI_01608	1.35e-56	-	-	-	-	-	-	-	-
NEKLCKCI_01610	1.6e-104	gloA	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
NEKLCKCI_01611	2.67e-224	-	-	-	M	-	-	-	heme binding
NEKLCKCI_01612	2.05e-150	-	-	-	EGP	ko:K08217	-	br01600,ko00000,ko01504,ko02000	Transmembrane secretion effector
NEKLCKCI_01614	2.57e-192	-	-	-	-	-	-	-	-
NEKLCKCI_01615	1.1e-13	-	-	-	CE	ko:K03294	-	ko00000	Amino acid permease
NEKLCKCI_01616	1.99e-144	-	-	-	S	-	-	-	Putative ABC-transporter type IV
NEKLCKCI_01617	5.99e-143	-	1.6.5.2	-	S	ko:K00355	ko00130,ko01110,ko05200,ko05225,ko05418,map00130,map01110,map05200,map05225,map05418	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
NEKLCKCI_01618	1.31e-245	-	-	-	V	-	-	-	VanZ like family
NEKLCKCI_01619	1.1e-188	-	-	-	KT	-	-	-	RESPONSE REGULATOR receiver
NEKLCKCI_01620	3.34e-92	pdxH	-	-	S	ko:K07006	-	ko00000	Pfam:Pyridox_oxidase
NEKLCKCI_01621	3.18e-188	-	-	-	S	ko:K09974	-	ko00000	Domain of unknown function (DUF1287)
NEKLCKCI_01622	5.47e-168	-	-	-	C	-	-	-	Putative TM nitroreductase
NEKLCKCI_01623	1.8e-159	-	-	-	-	-	-	-	-
NEKLCKCI_01625	0.0	treS_1	-	-	G	-	-	-	Alpha amylase, catalytic domain
NEKLCKCI_01626	1.26e-100	-	-	-	S	-	-	-	Bacterial PH domain
NEKLCKCI_01627	1.11e-175	gpmB	3.1.3.85, 5.4.2.11	-	G	ko:K01834,ko:K22306	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Phosphoglycerate mutase family
NEKLCKCI_01628	1.01e-87	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
NEKLCKCI_01629	0.0	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
NEKLCKCI_01631	1.66e-244	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NEKLCKCI_01632	5.93e-187	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
NEKLCKCI_01633	2.98e-119	-	-	-	-	-	-	-	-
NEKLCKCI_01634	7.21e-300	proA	1.2.1.41	-	E	ko:K00147	ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
NEKLCKCI_01635	0.0	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase N terminus
NEKLCKCI_01636	3.78e-157	-	-	-	S	-	-	-	ABC-2 family transporter protein
NEKLCKCI_01637	6.5e-163	-	-	-	S	-	-	-	ABC-2 family transporter protein
NEKLCKCI_01638	2.69e-228	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
NEKLCKCI_01639	6.98e-78	-	-	-	K	ko:K07979	-	ko00000,ko03000	helix_turn_helix gluconate operon transcriptional repressor
NEKLCKCI_01640	3.05e-159	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
NEKLCKCI_01641	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
NEKLCKCI_01642	3.15e-235	nadK	2.7.1.23	-	H	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
NEKLCKCI_01643	0.0	trkH	-	-	P	ko:K03498	-	ko00000,ko02000	Cation transport protein
NEKLCKCI_01644	5.24e-150	trkA	-	-	P	ko:K03499	-	ko00000,ko02000	TrkA-N domain
NEKLCKCI_01645	1.46e-139	-	-	-	-	-	-	-	-
NEKLCKCI_01646	3.26e-175	tlyA	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
NEKLCKCI_01648	1.78e-241	-	-	-	G	-	-	-	Haloacid dehalogenase-like hydrolase
NEKLCKCI_01649	8.79e-304	-	-	-	L	-	-	-	Tetratricopeptide repeat
NEKLCKCI_01650	0.0	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
NEKLCKCI_01651	3.54e-185	-	-	-	S	-	-	-	Putative ABC-transporter type IV
NEKLCKCI_01652	3.22e-140	-	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
NEKLCKCI_01653	0.0	argH	4.3.2.1	-	E	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	argininosuccinate lyase
NEKLCKCI_01654	0.0	hsdR	3.1.21.3	-	V	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
NEKLCKCI_01655	0.0	-	-	-	K	-	-	-	Putative DNA-binding domain
NEKLCKCI_01657	2.77e-229	-	-	-	-	-	-	-	-
NEKLCKCI_01658	0.0	-	3.4.21.53	-	O	ko:K01338	ko04112,map04112	ko00000,ko00001,ko01000,ko01002	Putative ATP-dependent Lon protease
NEKLCKCI_01659	0.0	-	-	-	H	-	-	-	PglZ domain
NEKLCKCI_01660	0.0	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative DNA-binding domain
NEKLCKCI_01661	0.0	-	-	-	-	-	-	-	-
NEKLCKCI_01662	0.0	-	-	-	LV	-	-	-	DNA restriction-modification system
NEKLCKCI_01663	0.0	-	-	-	K	-	-	-	RNA-binding protein homologous to eukaryotic snRNP
NEKLCKCI_01664	5.34e-161	-	-	-	S	-	-	-	Domain of unknown function (DUF1788)
NEKLCKCI_01665	9.57e-144	-	-	-	S	-	-	-	Putative inner membrane protein (DUF1819)
NEKLCKCI_01666	1.11e-239	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
NEKLCKCI_01667	6.9e-147	-	-	-	S	ko:K07126	-	ko00000	Sel1-like repeats.
NEKLCKCI_01668	1.18e-207	-	-	-	S	ko:K11206	-	ko00000,ko01000	Carbon-nitrogen hydrolase
NEKLCKCI_01669	4.56e-209	ylmA	3.6.3.34	-	P	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
NEKLCKCI_01670	3.37e-312	glgA	2.4.1.342	GT4	G	ko:K16148	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000,ko01003	Starch synthase catalytic domain
NEKLCKCI_01671	5.23e-107	-	-	-	-	-	-	-	-
NEKLCKCI_01672	0.0	gltD	1.4.1.13, 1.4.1.14	-	C	ko:K00266	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
NEKLCKCI_01673	0.0	gltB	1.4.1.13, 1.4.1.14, 1.4.7.1	-	E	ko:K00265,ko:K00284	ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	glutamate synthase NADPH large subunit
NEKLCKCI_01674	0.0	tetM	-	-	J	ko:K18220	-	br01600,ko00000,ko01504	Elongation factor G, domain IV
NEKLCKCI_01675	0.0	aspC	2.6.1.1, 2.6.1.2, 2.6.1.66	-	E	ko:K00812,ko:K08969,ko:K10907,ko:K14260	ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase, class I II
NEKLCKCI_01676	1.1e-310	hemN	-	-	H	-	-	-	Involved in the biosynthesis of porphyrin-containing compound
NEKLCKCI_01677	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
NEKLCKCI_01678	3.91e-46	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
NEKLCKCI_01679	1.61e-175	-	-	-	S	-	-	-	UPF0126 domain
NEKLCKCI_01680	9.66e-126	-	-	-	T	-	-	-	RNA ligase
NEKLCKCI_01681	1.65e-61	-	-	-	S	-	-	-	phosphoesterase or phosphohydrolase
NEKLCKCI_01682	1.58e-287	ilvE	2.6.1.42	-	E	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Amino-transferase class IV
NEKLCKCI_01683	1.66e-128	ctc	-	-	J	ko:K02897	ko03010,map03010	ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
NEKLCKCI_01684	2.09e-242	-	-	-	S	ko:K06889	-	ko00000	alpha beta
NEKLCKCI_01685	1.72e-306	pntB	1.6.1.2	-	C	ko:K00325	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
NEKLCKCI_01686	1.08e-58	pntAB	1.6.1.2	-	C	ko:K00324	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	4TM region of pyridine nucleotide transhydrogenase, mitoch
NEKLCKCI_01687	3.99e-258	pntA	1.6.1.2	-	C	ko:K00324	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	NAD(P) transhydrogenase subunit alpha part 1 K00324
NEKLCKCI_01688	0.0	fadD2	6.2.1.3	-	I	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	AMP-binding enzyme
NEKLCKCI_01689	1.96e-236	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
NEKLCKCI_01690	0.0	corC	-	-	S	-	-	-	CBS domain
NEKLCKCI_01691	1.82e-130	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
NEKLCKCI_01692	2.48e-252	phoH	-	-	T	ko:K06217	-	ko00000	PhoH-like protein
NEKLCKCI_01693	1.37e-76	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
NEKLCKCI_01694	2.18e-175	-	2.1.1.193	-	J	ko:K09761	-	ko00000,ko01000,ko03009	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
NEKLCKCI_01696	1.78e-208	spoU2	-	-	J	-	-	-	SpoU rRNA Methylase family
NEKLCKCI_01697	1.42e-308	glgC	2.7.7.27	-	H	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
NEKLCKCI_01698	3.49e-139	-	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
NEKLCKCI_01699	4.14e-132	iscU	-	-	C	ko:K04488	-	ko00000	SUF system FeS assembly protein, NifU family
NEKLCKCI_01700	3.1e-307	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NEKLCKCI_01701	2.13e-185	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	FeS assembly ATPase SufC
NEKLCKCI_01702	2.5e-299	sufD	-	-	O	ko:K09015	-	ko00000	FeS assembly protein SufD
NEKLCKCI_01703	0.0	sufB	-	-	O	ko:K09014	-	ko00000	FeS assembly protein SufB
NEKLCKCI_01704	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
NEKLCKCI_01705	1.31e-05	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase (surface protein transpeptidase)
NEKLCKCI_01706	3.46e-154	-	-	-	K	-	-	-	helix_turn_helix, Lux Regulon
NEKLCKCI_01707	4.78e-138	-	-	-	-	-	-	-	-
NEKLCKCI_01708	2.27e-103	aroQ	4.2.1.10	-	E	ko:K03786	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes a trans-dehydration via an enolate intermediate
NEKLCKCI_01709	0.0	aroB	2.7.1.71, 4.2.3.4	-	H	ko:K01735,ko:K13829	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
NEKLCKCI_01710	3.17e-280	aroC	4.2.3.5	-	E	ko:K01736	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
NEKLCKCI_01711	5.3e-69	-	3.4.23.43	-	S	ko:K02654	-	ko00000,ko00002,ko01000,ko01002,ko02035,ko02044	Type IV leader peptidase family
NEKLCKCI_01712	4.48e-247	mltG	-	-	S	ko:K07082	-	ko00000	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
NEKLCKCI_01713	6.58e-99	ruvX	-	-	L	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
NEKLCKCI_01714	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
NEKLCKCI_01715	7.33e-50	-	-	-	-	-	-	-	-
NEKLCKCI_01716	4.03e-85	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF948)
NEKLCKCI_01717	4.07e-173	-	5.4.2.12	-	G	ko:K15634	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Phosphoglycerate mutase family
NEKLCKCI_01718	0.0	-	-	-	I	-	-	-	Psort location CytoplasmicMembrane, score 9.99
NEKLCKCI_01719	1.83e-141	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
NEKLCKCI_01720	6.67e-173	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
NEKLCKCI_01721	2.18e-270	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
NEKLCKCI_01722	2.46e-84	-	-	-	S	-	-	-	Domain of unknown function (DUF4418)
NEKLCKCI_01723	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
NEKLCKCI_01724	0.0	yrhL	-	-	I	-	-	-	Psort location CytoplasmicMembrane, score 9.99
NEKLCKCI_01725	6.52e-139	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
NEKLCKCI_01726	8.29e-308	pbuX	-	-	F	ko:K03458	-	ko00000	Permease family
NEKLCKCI_01728	2.35e-55	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
NEKLCKCI_01729	5.09e-135	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
NEKLCKCI_01731	1.71e-144	pncA	3.5.1.19	-	Q	ko:K08281	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Isochorismatase family
NEKLCKCI_01732	9.3e-53	-	-	-	-	-	-	-	-
NEKLCKCI_01733	5.58e-33	-	-	-	S	-	-	-	Adenine-specific methyltransferase EcoRI
NEKLCKCI_01734	1.8e-94	tnp3521a2	-	-	L	-	-	-	Integrase core domain
NEKLCKCI_01736	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 20, domain 2
NEKLCKCI_01739	0.0	-	3.2.1.55	GH51	G	ko:K01209	ko00520,map00520	ko00000,ko00001,ko01000	arabinose metabolic process
NEKLCKCI_01740	9.15e-79	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
NEKLCKCI_01741	8e-163	gntR	-	-	K	-	-	-	FCD
NEKLCKCI_01742	0.0	gdhA	1.4.1.4	-	E	ko:K00262	ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
NEKLCKCI_01745	1.56e-11	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
NEKLCKCI_01746	4.38e-289	-	-	-	I	-	-	-	Serine aminopeptidase, S33
NEKLCKCI_01747	1.09e-238	-	-	-	K	-	-	-	Periplasmic binding protein domain
NEKLCKCI_01748	7.2e-239	-	-	-	G	-	-	-	Glycosyl hydrolases family 43
NEKLCKCI_01751	4.11e-104	-	-	-	S	-	-	-	Transmembrane domain of unknown function (DUF3566)
NEKLCKCI_01752	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NEKLCKCI_01753	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NEKLCKCI_01754	1.85e-123	-	-	-	S	-	-	-	Protein of unknown function (DUF721)
NEKLCKCI_01755	5.36e-306	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
NEKLCKCI_01756	1.15e-259	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
NEKLCKCI_01757	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
NEKLCKCI_01758	3.88e-20	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
NEKLCKCI_01759	2.11e-227	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Membrane protein insertase, YidC Oxa1 family
NEKLCKCI_01760	4.15e-120	jag	-	-	S	ko:K06346	-	ko00000	Putative single-stranded nucleic acids-binding domain
NEKLCKCI_01761	2.59e-162	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
NEKLCKCI_01762	1.05e-229	parA	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	CobQ CobB MinD ParA nucleotide binding domain protein
NEKLCKCI_01763	2.69e-310	parB	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
NEKLCKCI_01764	9.66e-259	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
NEKLCKCI_01765	0.0	mviN	-	-	KLT	ko:K03980	-	ko00000,ko01011,ko02000	MviN-like protein
NEKLCKCI_01766	0.0	-	-	-	M	-	-	-	Conserved repeat domain
NEKLCKCI_01767	3.18e-160	mutT4	-	-	L	-	-	-	Belongs to the Nudix hydrolase family
NEKLCKCI_01768	0.0	pcnA	2.7.7.19, 2.7.7.72	-	J	ko:K00970,ko:K00974	ko03013,ko03018,map03013,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	Probable RNA and SrmB- binding site of polymerase A
NEKLCKCI_01769	6.94e-146	-	-	-	S	-	-	-	LytR cell envelope-related transcriptional attenuator
NEKLCKCI_01770	1.32e-213	ispE	2.7.1.148	-	F	ko:K00919	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
NEKLCKCI_01771	8.75e-212	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
NEKLCKCI_01772	3.97e-279	rpfB	-	-	S	ko:K21688	-	ko00000	G5
NEKLCKCI_01774	2.47e-199	-	-	-	O	-	-	-	Thioredoxin
NEKLCKCI_01775	0.0	-	-	-	KLT	-	-	-	Protein tyrosine kinase
NEKLCKCI_01776	7.97e-223	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
NEKLCKCI_01777	7.3e-268	ugpC	-	-	E	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
NEKLCKCI_01778	2.69e-133	-	-	-	L	-	-	-	Helix-turn-helix domain
NEKLCKCI_01779	0.0	-	-	-	S	-	-	-	LPXTG-motif cell wall anchor domain protein
NEKLCKCI_01780	3.98e-305	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
NEKLCKCI_01781	5.45e-232	-	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
NEKLCKCI_01782	3.17e-199	-	-	-	-	-	-	-	-
NEKLCKCI_01783	0.0	-	-	-	KLT	-	-	-	Domain of unknown function (DUF4032)
NEKLCKCI_01784	2.19e-223	rlmB	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NEKLCKCI_01786	0.0	pacL2	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	Cation transporter/ATPase, N-terminus
NEKLCKCI_01787	0.0	-	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	Glycosyl hydrolase family 36 N-terminal domain
NEKLCKCI_01788	6.04e-144	dcd	3.5.4.13	-	F	ko:K01494	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dCTP deaminase family
NEKLCKCI_01789	0.0	nhaP	-	-	P	ko:K03316	-	ko00000	Sodium/hydrogen exchanger family
NEKLCKCI_01790	3.99e-186	-	-	-	S	ko:K06999	-	ko00000	Phospholipase/Carboxylesterase
NEKLCKCI_01791	1.12e-109	tadA	3.5.4.1, 3.5.4.33	-	FJ	ko:K01485,ko:K11991	ko00240,ko00330,ko01100,map00240,map00330,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
NEKLCKCI_01792	2.67e-296	ilvA	4.3.1.19	-	E	ko:K01754	ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Pyridoxal-phosphate dependent enzyme
NEKLCKCI_01793	1.7e-185	cobB2	-	-	K	ko:K12410	-	ko00000,ko01000	Sir2 family