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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
PDGPJJMA_00002	3.21e-157	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.96
PDGPJJMA_00003	3.47e-205	-	2.7.1.95	-	F	ko:K00897	-	ko00000,ko01000,ko01504	Phosphotransferase enzyme family
PDGPJJMA_00004	1.7e-185	cobB2	-	-	K	ko:K12410	-	ko00000,ko01000	Sir2 family
PDGPJJMA_00005	5.39e-296	ilvA	4.3.1.19	-	E	ko:K01754	ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Pyridoxal-phosphate dependent enzyme
PDGPJJMA_00006	1.12e-109	tadA	3.5.4.1, 3.5.4.33	-	FJ	ko:K01485,ko:K11991	ko00240,ko00330,ko01100,map00240,map00330,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PDGPJJMA_00007	6.35e-183	-	-	-	S	ko:K06999	-	ko00000	Phospholipase/Carboxylesterase
PDGPJJMA_00008	0.0	nhaP	-	-	P	ko:K03316	-	ko00000	Sodium/hydrogen exchanger family
PDGPJJMA_00009	6.04e-144	dcd	3.5.4.13	-	F	ko:K01494	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dCTP deaminase family
PDGPJJMA_00010	0.0	-	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	Glycosyl hydrolase family 36 N-terminal domain
PDGPJJMA_00011	0.0	pacL2	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	Cation transporter/ATPase, N-terminus
PDGPJJMA_00013	2.19e-223	rlmB	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDGPJJMA_00014	0.0	-	-	-	KLT	-	-	-	Domain of unknown function (DUF4032)
PDGPJJMA_00015	7.45e-198	-	-	-	-	-	-	-	-
PDGPJJMA_00016	1.23e-228	-	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
PDGPJJMA_00017	7.55e-278	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
PDGPJJMA_00018	0.0	-	-	-	S	-	-	-	LPXTG-motif cell wall anchor domain protein
PDGPJJMA_00019	1.56e-132	-	-	-	L	-	-	-	Helix-turn-helix domain
PDGPJJMA_00020	1.54e-269	ugpC	-	-	E	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PDGPJJMA_00021	9.3e-222	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
PDGPJJMA_00022	0.0	-	-	-	KLT	-	-	-	Protein tyrosine kinase
PDGPJJMA_00023	1.29e-201	-	-	-	O	-	-	-	Thioredoxin
PDGPJJMA_00025	2.29e-278	rpfB	-	-	S	ko:K21688	-	ko00000	G5
PDGPJJMA_00026	8.92e-218	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PDGPJJMA_00027	3.25e-214	ispE	2.7.1.148	-	F	ko:K00919	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PDGPJJMA_00028	6.94e-146	-	-	-	S	-	-	-	LytR cell envelope-related transcriptional attenuator
PDGPJJMA_00029	0.0	pcnA	2.7.7.19, 2.7.7.72	-	J	ko:K00970,ko:K00974	ko03013,ko03018,map03013,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	Probable RNA and SrmB- binding site of polymerase A
PDGPJJMA_00030	3.18e-160	mutT4	-	-	L	-	-	-	Belongs to the Nudix hydrolase family
PDGPJJMA_00031	0.0	-	-	-	M	-	-	-	Conserved repeat domain
PDGPJJMA_00032	0.0	mviN	-	-	KLT	ko:K03980	-	ko00000,ko01011,ko02000	MviN-like protein
PDGPJJMA_00033	3.37e-259	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PDGPJJMA_00034	6.9e-313	parB	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
PDGPJJMA_00035	1.05e-229	parA	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	CobQ CobB MinD ParA nucleotide binding domain protein
PDGPJJMA_00036	6.09e-161	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
PDGPJJMA_00037	1.19e-119	jag	-	-	S	ko:K06346	-	ko00000	Putative single-stranded nucleic acids-binding domain
PDGPJJMA_00038	6.04e-227	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Membrane protein insertase, YidC Oxa1 family
PDGPJJMA_00039	3.88e-20	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
PDGPJJMA_00040	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PDGPJJMA_00041	1.15e-259	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PDGPJJMA_00042	4.6e-307	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PDGPJJMA_00043	1.36e-125	-	-	-	S	-	-	-	Protein of unknown function (DUF721)
PDGPJJMA_00044	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDGPJJMA_00045	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDGPJJMA_00046	8.3e-104	-	-	-	S	-	-	-	Transmembrane domain of unknown function (DUF3566)
PDGPJJMA_00049	1.24e-239	-	-	-	G	-	-	-	Glycosyl hydrolases family 43
PDGPJJMA_00050	1.09e-238	-	-	-	K	-	-	-	Periplasmic binding protein domain
PDGPJJMA_00051	4.38e-289	-	-	-	I	-	-	-	Serine aminopeptidase, S33
PDGPJJMA_00052	1.56e-11	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PDGPJJMA_00054	0.0	gdhA	1.4.1.4	-	E	ko:K00262	ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
PDGPJJMA_00055	3.26e-162	gntR	-	-	K	-	-	-	FCD
PDGPJJMA_00056	2.15e-77	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PDGPJJMA_00057	0.0	-	3.2.1.55	GH51	G	ko:K01209	ko00520,map00520	ko00000,ko00001,ko01000	arabinose metabolic process
PDGPJJMA_00060	0.0	-	-	-	G	-	-	-	Glycosyl hydrolase family 20, domain 2
PDGPJJMA_00061	5.98e-243	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PDGPJJMA_00062	6.23e-102	ulaC	2.7.1.194	-	G	ko:K02821	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PDGPJJMA_00063	1.49e-54	-	2.7.1.194	-	G	ko:K02822	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
PDGPJJMA_00064	0.0	ulaA	-	-	S	ko:K03475	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
PDGPJJMA_00065	3.45e-174	-	-	-	S	ko:K07043	-	ko00000	Protein of unknown function DUF45
PDGPJJMA_00066	1.09e-109	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
PDGPJJMA_00067	2.83e-240	-	-	-	EG	-	-	-	EamA-like transporter family
PDGPJJMA_00068	3.36e-306	-	-	-	P	ko:K03699	-	ko00000,ko02042	Transporter associated domain
PDGPJJMA_00069	9.69e-122	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PDGPJJMA_00070	2.03e-152	cah	4.2.1.1	-	P	ko:K01673	ko00910,map00910	ko00000,ko00001,ko01000	Reversible hydration of carbon dioxide
PDGPJJMA_00071	1.01e-137	ahpC	1.11.1.15	-	O	ko:K03386	ko04214,map04214	ko00000,ko00001,ko01000,ko04147	C-terminal domain of 1-Cys peroxiredoxin
PDGPJJMA_00072	0.0	-	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Thioredoxin domain
PDGPJJMA_00073	0.0	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
PDGPJJMA_00074	7.94e-308	-	-	-	EGP	ko:K08177	-	ko00000,ko02000	Major Facilitator Superfamily
PDGPJJMA_00075	0.0	ppc	4.1.1.31	-	H	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PDGPJJMA_00076	0.0	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
PDGPJJMA_00077	2.09e-225	-	-	-	S	-	-	-	Amidohydrolase family
PDGPJJMA_00078	1.12e-246	-	-	-	S	-	-	-	Protein conserved in bacteria
PDGPJJMA_00079	1.2e-261	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
PDGPJJMA_00080	5.42e-67	-	-	-	S	-	-	-	Protein of unknown function (DUF3073)
PDGPJJMA_00081	6.08e-114	-	-	-	K	-	-	-	LytTr DNA-binding domain
PDGPJJMA_00082	3.56e-114	-	-	-	T	-	-	-	protein histidine kinase activity
PDGPJJMA_00083	5.04e-260	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PDGPJJMA_00084	8.14e-39	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
PDGPJJMA_00085	0.0	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
PDGPJJMA_00086	5.52e-214	-	-	-	M	-	-	-	Glycosyl transferase family 2
PDGPJJMA_00087	1.73e-228	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PDGPJJMA_00088	4.06e-98	-	-	-	S	-	-	-	Acyltransferase family
PDGPJJMA_00089	3.32e-19	-	-	-	L	ko:K07483	-	ko00000	Transposase
PDGPJJMA_00090	3.78e-71	-	-	-	S	-	-	-	Polysaccharide pyruvyl transferase
PDGPJJMA_00091	1.52e-223	-	-	-	M	-	-	-	Glycosyl transferases group 1
PDGPJJMA_00092	1.29e-163	-	-	-	S	-	-	-	Glycosyltransferase, group 2 family protein
PDGPJJMA_00093	3.68e-135	tagG	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	Transport permease protein
PDGPJJMA_00094	1.04e-212	-	-	-	GM	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PDGPJJMA_00095	0.0	glfT	2.4.1.288	GT2	S	ko:K16650	-	ko00000,ko01000,ko01003	Glycosyltransferase like family 2
PDGPJJMA_00096	1.64e-284	glf	5.4.99.9	-	M	ko:K01854	ko00052,ko00520,map00052,map00520	ko00000,ko00001,ko01000	UDP-galactopyranose mutase
PDGPJJMA_00097	1.76e-41	-	-	-	L	-	-	-	NUDIX domain
PDGPJJMA_00098	2.62e-58	-	-	-	-	-	-	-	-
PDGPJJMA_00099	9.67e-48	-	-	-	-	-	-	-	-
PDGPJJMA_00100	1.89e-255	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PDGPJJMA_00101	4.94e-272	-	-	-	G	-	-	-	Transmembrane secretion effector
PDGPJJMA_00102	1.16e-151	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PDGPJJMA_00103	8.78e-218	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
PDGPJJMA_00104	8.75e-140	-	-	-	LU	ko:K04096	-	ko00000	DNA recombination-mediator protein A
PDGPJJMA_00105	9.33e-91	-	-	-	S	-	-	-	competence protein
PDGPJJMA_00106	3.48e-261	-	-	-	L	-	-	-	Transposase and inactivated derivatives IS30 family
PDGPJJMA_00108	8.14e-16	-	-	-	S	-	-	-	Protein of unknown function (DUF2806)
PDGPJJMA_00110	1.48e-35	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
PDGPJJMA_00111	1.65e-47	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
PDGPJJMA_00112	6.82e-19	-	-	-	S	-	-	-	Putative phage holin Dp-1
PDGPJJMA_00113	1.9e-17	-	-	-	-	-	-	-	-
PDGPJJMA_00114	0.0	-	-	-	U	-	-	-	Drug resistance MFS transporter, drug H antiporter-2 family
PDGPJJMA_00115	7.04e-57	-	-	-	L	-	-	-	Integrase core domain
PDGPJJMA_00116	3.72e-13	istB	-	-	L	-	-	-	IstB-like ATP binding protein
PDGPJJMA_00117	2.78e-26	-	-	-	V	ko:K06147	-	ko00000,ko02000	ATPases associated with a variety of cellular activities
PDGPJJMA_00118	5.53e-96	-	-	-	I	-	-	-	Sterol carrier protein
PDGPJJMA_00119	0.0	glgP	2.4.1.1	GT35	G	ko:K00688	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	ko00000,ko00001,ko01000	Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PDGPJJMA_00120	7.68e-47	-	-	-	-	-	-	-	-
PDGPJJMA_00121	2.4e-186	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Rhomboid family
PDGPJJMA_00122	0.0	-	-	-	L	-	-	-	ribosomal rna small subunit methyltransferase
PDGPJJMA_00123	8.05e-100	crgA	-	-	D	-	-	-	Involved in cell division
PDGPJJMA_00124	2.05e-183	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF881)
PDGPJJMA_00125	1.14e-295	srtB	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
PDGPJJMA_00126	9.5e-156	trpG	2.6.1.85, 4.1.3.27	-	EH	ko:K01658,ko:K01664	ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	para-aminobenzoate synthase glutamine amidotransferase component II
PDGPJJMA_00127	0.0	pknB	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	Protein tyrosine kinase
PDGPJJMA_00128	5.69e-234	pknA	2.7.11.1	-	T	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	Protein tyrosine kinase
PDGPJJMA_00129	0.0	pbpA	-	-	M	ko:K05364	ko00550,map00550	ko00000,ko00001,ko01011	penicillin-binding protein
PDGPJJMA_00130	0.0	rodA	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
PDGPJJMA_00131	0.0	pstP	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	Sigma factor PP2C-like phosphatases
PDGPJJMA_00132	1.44e-122	fhaB	-	-	T	-	-	-	Inner membrane component of T3SS, cytoplasmic domain
PDGPJJMA_00133	3.69e-167	fhaA	-	-	T	-	-	-	Protein of unknown function (DUF2662)
PDGPJJMA_00134	0.0	pepX	3.4.14.5	-	E	ko:K01278	ko04974,map04974	ko00000,ko00001,ko01000,ko01002,ko04090,ko04147	Dipeptidyl peptidase IV (DPP IV) N-terminal region
PDGPJJMA_00135	0.0	-	-	-	S	ko:K01421	-	ko00000	YhgE Pip domain protein
PDGPJJMA_00136	0.0	-	-	-	S	ko:K01421	-	ko00000	YhgE Pip domain protein
PDGPJJMA_00137	2.07e-264	pldB	3.1.1.5	-	I	ko:K01048	ko00564,map00564	ko00000,ko00001,ko01000	Serine aminopeptidase, S33
PDGPJJMA_00138	2.55e-213	-	-	-	EG	-	-	-	EamA-like transporter family
PDGPJJMA_00139	1.35e-146	-	-	-	-	-	-	-	-
PDGPJJMA_00141	4.98e-252	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PDGPJJMA_00143	0.0	-	-	-	KL	-	-	-	Domain of unknown function (DUF3427)
PDGPJJMA_00144	3.72e-116	mutT	3.6.1.55	-	L	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
PDGPJJMA_00145	6.78e-62	-	-	-	D	-	-	-	DivIVA domain protein
PDGPJJMA_00146	1.75e-69	-	-	-	S	-	-	-	Putative heavy-metal-binding
PDGPJJMA_00147	1.58e-199	-	-	-	I	-	-	-	Serine aminopeptidase, S33
PDGPJJMA_00148	1.84e-109	-	-	-	Q	-	-	-	Acetyltransferase (GNAT) domain
PDGPJJMA_00150	0.0	tgt	2.4.2.29	-	F	ko:K00773	-	ko00000,ko01000,ko03016	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PDGPJJMA_00151	0.0	degP	-	-	O	ko:K08372	ko02020,map02020	ko00000,ko00001,ko01000,ko01002	Domain present in PSD-95, Dlg, and ZO-1/2.
PDGPJJMA_00152	0.0	-	3.6.3.4, 3.6.3.54	-	P	ko:K01533,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	E1-E2 ATPase
PDGPJJMA_00153	0.0	fprA	1.18.1.2, 1.19.1.1	-	C	ko:K00528	-	ko00000,ko01000	Pyridine nucleotide-disulphide oxidoreductase
PDGPJJMA_00154	5.77e-217	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
PDGPJJMA_00156	0.0	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
PDGPJJMA_00157	7.44e-57	-	-	-	S	-	-	-	Bacterial mobilisation protein (MobC)
PDGPJJMA_00158	3.76e-163	-	-	-	S	-	-	-	Domain of unknown function (DUF4417)
PDGPJJMA_00160	4.37e-80	-	-	-	-	-	-	-	-
PDGPJJMA_00161	4.81e-84	-	-	-	-	-	-	-	-
PDGPJJMA_00162	7.82e-65	-	-	-	E	-	-	-	IrrE N-terminal-like domain
PDGPJJMA_00164	1.42e-74	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
PDGPJJMA_00165	0.0	-	3.2.1.8, 3.5.1.104	-	G	ko:K01181,ko:K22278	-	ko00000,ko01000	Polysaccharide deacetylase
PDGPJJMA_00166	2.17e-253	fbaA	4.1.2.13	-	G	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-bisphosphate aldolase class-II
PDGPJJMA_00167	1.94e-316	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PDGPJJMA_00168	3.06e-211	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDGPJJMA_00169	3.43e-79	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDGPJJMA_00170	4.45e-253	-	-	-	K	ko:K03484	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PDGPJJMA_00171	1.05e-97	gtfA	2.4.1.7	GH13	G	ko:K00690	ko00500,map00500	ko00000,ko00001,ko01000	Domain of unknown function (DUF1964)
PDGPJJMA_00172	0.0	scrT	-	-	G	-	-	-	Transporter major facilitator family protein
PDGPJJMA_00173	0.0	-	-	-	EGP	-	-	-	Sugar (and other) transporter
PDGPJJMA_00174	6.15e-261	ilvC	1.1.1.86	-	H	ko:K00053	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PDGPJJMA_00175	1.19e-258	ilvC	1.1.1.86	-	H	ko:K00053	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PDGPJJMA_00176	1.34e-233	-	-	-	S	-	-	-	Protein of unknown function (DUF559)
PDGPJJMA_00177	0.0	lacZ	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.87
PDGPJJMA_00178	0.0	aroP	-	-	E	ko:K03293,ko:K11732	-	ko00000,ko02000	aromatic amino acid transport protein AroP K03293
PDGPJJMA_00179	2.46e-132	-	-	-	K	-	-	-	Transcriptional regulator C-terminal region
PDGPJJMA_00180	4.31e-166	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
PDGPJJMA_00181	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PDGPJJMA_00182	2.21e-109	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PDGPJJMA_00183	5.48e-150	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PDGPJJMA_00184	9.3e-53	urtE	-	-	E	ko:K11963	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PDGPJJMA_00185	8.29e-129	bcp	1.11.1.15	-	O	ko:K03564	-	ko00000,ko01000	Redoxin
PDGPJJMA_00186	2.42e-198	-	-	-	S	ko:K07058	-	ko00000	Virulence factor BrkB
PDGPJJMA_00187	8.66e-57	-	-	-	O	-	-	-	Glutaredoxin
PDGPJJMA_00188	2.12e-137	-	-	-	L	ko:K07485	-	ko00000	Transposase
PDGPJJMA_00190	0.0	-	-	-	S	-	-	-	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
PDGPJJMA_00191	0.0	bga1	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.87
PDGPJJMA_00192	2.86e-72	-	-	-	L	ko:K07454	-	ko00000	HNH endonuclease
PDGPJJMA_00193	3.25e-307	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
PDGPJJMA_00194	4.12e-184	-	-	-	-	-	-	-	-
PDGPJJMA_00195	0.0	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PDGPJJMA_00196	1.57e-54	-	-	-	IQ	-	-	-	[acyl-carrier-protein] S-malonyltransferase activity
PDGPJJMA_00197	2.11e-156	-	-	-	L	ko:K07483	-	ko00000	Integrase core domain
PDGPJJMA_00198	3.34e-47	-	-	-	L	ko:K07483	-	ko00000	Psort location Cytoplasmic, score 8.87
PDGPJJMA_00199	1.11e-148	-	-	-	K	-	-	-	WHG domain
PDGPJJMA_00200	4.12e-142	-	-	-	Q	-	-	-	4'-phosphopantetheinyl transferase superfamily
PDGPJJMA_00201	2.72e-20	-	-	-	-	-	-	-	-
PDGPJJMA_00202	0.0	-	-	-	-	-	-	-	-
PDGPJJMA_00203	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	modification (methylase) protein of type I restriction-modification system K03427
PDGPJJMA_00205	9.18e-111	-	3.1.21.3	-	L	ko:K01154	-	ko00000,ko01000,ko02048	PFAM restriction modification system DNA specificity domain
PDGPJJMA_00206	8.03e-229	-	-	-	V	-	-	-	Abi-like protein
PDGPJJMA_00207	0.0	hsdR	3.1.21.3	-	V	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
PDGPJJMA_00208	4.68e-78	-	-	-	S	-	-	-	Bacterial mobilisation protein (MobC)
PDGPJJMA_00209	0.0	-	-	-	U	-	-	-	Relaxase/Mobilisation nuclease domain
PDGPJJMA_00210	6.29e-135	-	-	-	-	-	-	-	-
PDGPJJMA_00213	0.0	intA	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
PDGPJJMA_00215	2.99e-72	-	-	-	-	-	-	-	-
PDGPJJMA_00216	4.73e-42	-	-	-	M	-	-	-	F5/8 type C domain
PDGPJJMA_00217	2.2e-244	-	-	-	C	-	-	-	Aldo/keto reductase family
PDGPJJMA_00218	2.3e-58	-	-	-	S	-	-	-	Protein of unknown function (DUF1778)
PDGPJJMA_00219	4.32e-122	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PDGPJJMA_00220	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter, ATP-binding protein
PDGPJJMA_00221	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter transmembrane region
PDGPJJMA_00222	0.0	-	3.2.1.51	GH95	G	ko:K15923	ko00511,map00511	ko00000,ko00001,ko01000	Glycosyl hydrolase family 65, N-terminal domain
PDGPJJMA_00223	3.03e-139	-	-	-	S	ko:K06910	-	ko00000	Phosphatidylethanolamine-binding protein
PDGPJJMA_00224	0.0	pepD	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Peptidase family C69
PDGPJJMA_00225	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Formate-tetrahydrofolate ligase
PDGPJJMA_00226	7.81e-82	-	-	-	S	-	-	-	Macrophage migration inhibitory factor (MIF)
PDGPJJMA_00227	8.73e-127	-	-	-	S	-	-	-	GtrA-like protein
PDGPJJMA_00228	0.0	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PDGPJJMA_00229	1.11e-161	-	-	-	G	-	-	-	Phosphoglycerate mutase family
PDGPJJMA_00230	2.96e-194	-	-	-	-	-	-	-	-
PDGPJJMA_00231	4.1e-178	-	-	-	P	-	-	-	Binding-protein-dependent transport system inner membrane component
PDGPJJMA_00232	5.05e-258	-	-	-	P	-	-	-	NMT1/THI5 like
PDGPJJMA_00233	1.3e-156	-	-	-	S	-	-	-	HAD hydrolase, family IA, variant 3
PDGPJJMA_00235	0.0	gltX	6.1.1.17	-	J	ko:K01885	ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PDGPJJMA_00236	1.76e-125	-	-	-	S	ko:K07133	-	ko00000	Domain of unknown function (DUF4143)
PDGPJJMA_00237	2.31e-56	-	-	-	S	ko:K07133	-	ko00000	Domain of unknown function (DUF4143)
PDGPJJMA_00240	6.78e-316	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
PDGPJJMA_00241	1.59e-179	ltbR	-	-	K	-	-	-	Transcriptional regulator, IclR family, C-terminal domain protein
PDGPJJMA_00242	0.0	leuC	4.2.1.33, 4.2.1.35	-	E	ko:K01703	ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PDGPJJMA_00243	1.35e-170	leuD	4.2.1.33, 4.2.1.35	-	E	ko:K01704	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PDGPJJMA_00244	0.0	-	-	-	KL	-	-	-	Psort location Cytoplasmic, score 8.87
PDGPJJMA_00246	3.59e-244	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PDGPJJMA_00247	1.02e-278	pyr	1.3.98.1	-	F	ko:K00226	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Dihydroorotate dehydrogenase
PDGPJJMA_00248	0.0	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PDGPJJMA_00249	1.22e-291	-	-	-	G	-	-	-	Transmembrane secretion effector
PDGPJJMA_00250	1.02e-170	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PDGPJJMA_00251	1.61e-186	-	-	-	-	-	-	-	-
PDGPJJMA_00252	1.43e-95	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PDGPJJMA_00253	1.23e-159	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PDGPJJMA_00254	8.52e-221	-	5.2.1.8	-	M	ko:K01802	-	ko00000,ko01000	FKBP-type peptidyl-prolyl cis-trans isomerase
PDGPJJMA_00255	2.83e-240	-	-	-	-	-	-	-	-
PDGPJJMA_00256	3.4e-231	-	-	-	-	-	-	-	-
PDGPJJMA_00257	2.52e-214	ybbN	-	-	O	ko:K05838	-	ko00000,ko03110	Tetratricopeptide repeat
PDGPJJMA_00258	3.58e-148	-	-	-	S	-	-	-	CYTH
PDGPJJMA_00260	1.98e-235	-	-	-	K	ko:K02529	-	ko00000,ko03000	Bacterial regulatory proteins, lacI family
PDGPJJMA_00261	2.74e-82	-	4.2.1.68	-	M	ko:K18334	ko00051,ko01120,map00051,map01120	ko00000,ko00001,ko01000	Enolase C-terminal domain-like
PDGPJJMA_00262	6.68e-193	-	1.1.1.100, 1.1.1.413	-	IQ	ko:K00059,ko:K18333,ko:K22322	ko00051,ko00061,ko00333,ko00780,ko01040,ko01100,ko01120,ko01130,ko01212,map00051,map00061,map00333,map00780,map01040,map01100,map01120,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	KR domain
PDGPJJMA_00264	0.0	gnpA	2.4.1.211	-	S	ko:K15533	-	ko00000,ko01000	Lacto-N-biose phosphorylase C-terminal domain
PDGPJJMA_00265	2.69e-82	psp1	3.5.99.10	-	J	ko:K09022	-	ko00000,ko01000	Endoribonuclease L-PSP
PDGPJJMA_00266	1.26e-226	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Glycerophosphoryl diester phosphodiesterase family
PDGPJJMA_00267	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
PDGPJJMA_00268	0.0	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PDGPJJMA_00269	5.94e-107	-	2.7.1.208	-	G	ko:K02777,ko:K20107,ko:K20108	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PDGPJJMA_00270	0.0	nagE	2.7.1.193	-	G	ko:K02802,ko:K02803,ko:K02804	ko00520,ko02060,map00520,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
PDGPJJMA_00271	1.54e-305	hom	1.1.1.3, 2.7.2.4	-	E	ko:K00003,ko:K12524	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Homoserine dehydrogenase
PDGPJJMA_00272	5.51e-239	thrB	2.7.1.39	-	E	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PDGPJJMA_00273	0.0	maf	-	-	DF	ko:K06287	-	ko00000	Maf-like protein
PDGPJJMA_00274	6.41e-84	-	-	-	-	-	-	-	-
PDGPJJMA_00275	8.09e-76	-	-	-	-	-	-	-	-
PDGPJJMA_00276	4.36e-208	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PDGPJJMA_00277	0.0	-	-	-	V	-	-	-	Efflux ABC transporter, permease protein
PDGPJJMA_00278	9.55e-215	-	-	-	S	ko:K07088	-	ko00000	Transporter, auxin efflux carrier (AEC) family protein
PDGPJJMA_00279	1.41e-304	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Peptidase dimerisation domain
PDGPJJMA_00280	0.0	rne	3.1.26.12	-	J	ko:K08300,ko:K08301	ko03018,map03018	ko00000,ko00001,ko00002,ko01000,ko03009,ko03019	Ribonuclease E/G family
PDGPJJMA_00281	1.44e-62	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
PDGPJJMA_00282	2.12e-53	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal L27 protein
PDGPJJMA_00283	7.66e-275	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
PDGPJJMA_00284	0.0	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PDGPJJMA_00285	2.13e-256	proB	2.7.2.11	-	E	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PDGPJJMA_00286	7.11e-295	aspC	2.6.1.1	-	E	ko:K00812	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	DegT/DnrJ/EryC1/StrS aminotransferase family
PDGPJJMA_00288	1.42e-43	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PDGPJJMA_00289	4.94e-168	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
PDGPJJMA_00290	1.27e-221	plsC2	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Phosphate acyltransferases
PDGPJJMA_00291	1.38e-227	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
PDGPJJMA_00292	3.49e-279	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
PDGPJJMA_00293	4.28e-253	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Glycerophosphoryl diester phosphodiesterase family
PDGPJJMA_00294	0.0	-	3.2.1.97	GH101	G	ko:K17624	-	ko00000,ko01000	Glycosyl hydrolase 101 beta sandwich domain
PDGPJJMA_00295	5.34e-244	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PDGPJJMA_00296	0.0	-	-	-	D	-	-	-	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
PDGPJJMA_00297	9.37e-170	-	-	-	-	-	-	-	-
PDGPJJMA_00298	1.93e-241	-	-	-	T	-	-	-	Pfam Adenylate and Guanylate cyclase catalytic domain
PDGPJJMA_00299	6.47e-64	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
PDGPJJMA_00300	7.91e-111	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Single-stranded DNA-binding protein
PDGPJJMA_00301	1.51e-48	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PDGPJJMA_00302	2.34e-92	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
PDGPJJMA_00305	9.21e-52	-	-	-	S	-	-	-	Parallel beta-helix repeats
PDGPJJMA_00306	5.3e-97	-	-	-	E	-	-	-	Domain of unknown function (DUF5011)
PDGPJJMA_00308	3.99e-176	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
PDGPJJMA_00309	3.2e-176	-	-	-	M	-	-	-	Protein of unknown function (DUF3152)
PDGPJJMA_00310	1e-236	gluQ	6.1.1.17	-	J	ko:K01885	ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
PDGPJJMA_00311	5.02e-190	-	-	-	S	ko:K06997	-	ko00000	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PDGPJJMA_00312	2.45e-70	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Acylphosphatase
PDGPJJMA_00313	0.0	-	-	-	M	-	-	-	domain protein
PDGPJJMA_00314	0.0	-	-	-	M	-	-	-	LPXTG cell wall anchor motif
PDGPJJMA_00315	5.12e-268	-	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
PDGPJJMA_00316	5.55e-187	-	-	-	S	-	-	-	Domain of unknown function (DUF4854)
PDGPJJMA_00317	2.89e-199	-	-	-	Q	-	-	-	Fumarylacetoacetate (FAA) hydrolase family
PDGPJJMA_00319	0.0	clpB	-	-	O	ko:K03695,ko:K03696	ko01100,ko04213,map01100,map04213	ko00000,ko00001,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PDGPJJMA_00320	1.04e-169	-	-	-	M	-	-	-	Mechanosensitive ion channel
PDGPJJMA_00321	1.51e-153	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PDGPJJMA_00322	1.12e-305	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.87
PDGPJJMA_00323	1.67e-295	-	2.6.1.1	-	E	ko:K11358	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	Psort location Cytoplasmic, score 8.87
PDGPJJMA_00324	5.84e-111	-	-	-	M	-	-	-	Belongs to the glycosyl hydrolase 28 family
PDGPJJMA_00327	2.76e-55	-	-	-	K	-	-	-	Transcriptional regulator
PDGPJJMA_00328	0.0	-	6.2.1.3	-	I	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	AMP-binding enzyme
PDGPJJMA_00334	0.000121	xerC	-	-	D	ko:K03733	-	ko00000,ko03036	Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC-XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids
PDGPJJMA_00337	1.87e-66	-	-	-	S	-	-	-	Eco47II restriction endonuclease
PDGPJJMA_00338	4.83e-202	-	2.1.1.37	-	H	ko:K00558	ko00270,ko01100,ko05206,map00270,map01100,map05206	ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036	C-5 cytosine-specific DNA methylase
PDGPJJMA_00339	6.49e-28	tam	2.1.1.144	-	S	ko:K00598	-	ko00000,ko01000	Methyltransferase domain
PDGPJJMA_00340	2.05e-125	tam	2.1.1.144	-	S	ko:K00598	-	ko00000,ko01000	Methyltransferase domain
PDGPJJMA_00341	1.77e-300	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PDGPJJMA_00342	1.77e-72	-	-	-	L	-	-	-	RelB antitoxin
PDGPJJMA_00343	1.35e-12	-	-	-	T	-	-	-	Toxic component of a toxin-antitoxin (TA) module
PDGPJJMA_00344	8.3e-171	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PDGPJJMA_00345	1.74e-308	-	-	-	S	ko:K06902	ko04138,map04138	ko00000,ko00001,ko02000,ko04131	Vacuole effluxer Atg22 like
PDGPJJMA_00348	3.02e-253	-	-	-	G	-	-	-	pfkB family carbohydrate kinase
PDGPJJMA_00349	7.42e-41	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal L28 family
PDGPJJMA_00350	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	helicase superfamily c-terminal domain
PDGPJJMA_00351	1.74e-278	steT	-	-	E	ko:K03294	-	ko00000	amino acid
PDGPJJMA_00354	0.0	-	-	-	-	-	-	-	-
PDGPJJMA_00355	0.0	-	-	-	U	ko:K06956	-	ko00000	Sodium:dicarboxylate symporter family
PDGPJJMA_00356	3.78e-156	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	Conserved hypothetical protein 95
PDGPJJMA_00358	6.45e-138	-	-	-	S	ko:K07078	-	ko00000	Nitroreductase family
PDGPJJMA_00359	9.18e-109	-	-	-	O	-	-	-	Hsp20/alpha crystallin family
PDGPJJMA_00360	4.27e-227	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
PDGPJJMA_00361	2.27e-139	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PDGPJJMA_00362	3.56e-47	-	-	-	S	ko:K06960	-	ko00000	Belongs to the UPF0109 family
PDGPJJMA_00363	2.4e-80	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
PDGPJJMA_00364	0.0	-	-	-	EK	ko:K05825,ko:K18907	ko00300,ko01100,ko01130,ko01210,map00300,map01100,map01130,map01210	ko00000,ko00001,ko00002,ko01000,ko01504,ko03000	Alanine-glyoxylate amino-transferase
PDGPJJMA_00365	4.74e-132	-	-	-	S	ko:K06895	-	ko00000,ko02000	LysE type translocator
PDGPJJMA_00366	2.61e-280	-	-	-	S	-	-	-	Endonuclease/Exonuclease/phosphatase family
PDGPJJMA_00367	0.0	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PDGPJJMA_00368	1.14e-209	-	-	-	P	-	-	-	Cation efflux family
PDGPJJMA_00369	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
PDGPJJMA_00370	3.28e-174	-	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Peptidase C26
PDGPJJMA_00371	0.0	yjjK	-	-	S	ko:K15738	-	ko00000,ko02000	ABC transporter
PDGPJJMA_00372	1.04e-76	-	-	-	S	-	-	-	Protein of unknown function (DUF3039)
PDGPJJMA_00373	3.33e-116	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PDGPJJMA_00374	3.01e-184	-	-	-	-	-	-	-	-
PDGPJJMA_00375	2.17e-147	-	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
PDGPJJMA_00376	2.72e-34	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
PDGPJJMA_00377	1.56e-179	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PDGPJJMA_00378	0.0	ilvB	2.2.1.6	-	H	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Thiamine pyrophosphate enzyme, central domain
PDGPJJMA_00379	1.26e-118	ilvN	2.2.1.6	-	E	ko:K01653	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	ACT domain
PDGPJJMA_00381	2.46e-315	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PDGPJJMA_00382	6.69e-173	rph	2.7.7.56	-	J	ko:K00989	-	ko00000,ko01000,ko03016	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
PDGPJJMA_00383	1.14e-151	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PDGPJJMA_00384	3.79e-226	-	-	-	S	ko:K07088	-	ko00000	Auxin Efflux Carrier
PDGPJJMA_00387	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
PDGPJJMA_00388	2.09e-272	-	-	-	-	-	-	-	-
PDGPJJMA_00390	6.19e-263	-	-	-	-	-	-	-	-
PDGPJJMA_00392	2.62e-157	mgtC	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
PDGPJJMA_00393	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	Cation transporting ATPase, C-terminus
PDGPJJMA_00394	6.07e-40	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	Cation transporting ATPase, C-terminus
PDGPJJMA_00395	1e-28	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	Cation transporting ATPase, C-terminus
PDGPJJMA_00396	0.0	-	-	-	P	ko:K02049	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PDGPJJMA_00397	0.0	-	-	-	P	ko:K02050	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PDGPJJMA_00399	4.07e-220	-	-	-	K	-	-	-	Putative sugar-binding domain
PDGPJJMA_00400	1.46e-283	-	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
PDGPJJMA_00401	0.0	-	2.7.1.53	-	G	ko:K00880	ko00040,ko00053,map00040,map00053	ko00000,ko00001,ko01000	FGGY family of carbohydrate kinases, C-terminal domain
PDGPJJMA_00402	3.12e-220	-	5.1.3.22	-	G	ko:K03079	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Xylose isomerase-like TIM barrel
PDGPJJMA_00403	8.39e-167	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Class II Aldolase and Adducin N-terminal domain
PDGPJJMA_00404	2.33e-81	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PDGPJJMA_00405	2e-199	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PDGPJJMA_00406	6.64e-170	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDGPJJMA_00407	7.27e-266	-	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
PDGPJJMA_00408	0.0	fadD	6.2.1.3	-	I	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	AMP-binding enzyme
PDGPJJMA_00409	8.26e-199	pdxS	4.3.3.6	-	H	ko:K06215	ko00750,map00750	ko00000,ko00001,ko01000	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
PDGPJJMA_00410	9.49e-143	pdxT	4.3.3.6	-	H	ko:K08681	ko00750,map00750	ko00000,ko00001,ko01000	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
PDGPJJMA_00413	0.0	-	-	-	G	-	-	-	Glycosyl hydrolases family 43
PDGPJJMA_00414	1.19e-259	-	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
PDGPJJMA_00415	5.17e-218	-	-	-	S	-	-	-	Oxidoreductase, aldo keto reductase family protein
PDGPJJMA_00416	8.53e-158	-	-	-	L	-	-	-	Protein of unknown function (DUF1524)
PDGPJJMA_00417	5.91e-297	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
PDGPJJMA_00418	0.0	-	-	-	U	-	-	-	Drug resistance MFS transporter, drug H antiporter-2 family
PDGPJJMA_00419	2.78e-177	rfbP	-	-	M	-	-	-	Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
PDGPJJMA_00420	2.14e-119	-	-	-	G	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PDGPJJMA_00421	1.62e-131	-	-	-	S	-	-	-	Protein of unknown function (DUF4127)
PDGPJJMA_00422	1.65e-72	-	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
PDGPJJMA_00423	1.13e-108	nanE	5.1.3.9	-	G	ko:K01788	ko00520,map00520	ko00000,ko00001,ko01000	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PDGPJJMA_00425	1.71e-116	-	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	DNA topoisomerase
PDGPJJMA_00428	6.03e-86	-	-	-	-	-	-	-	-
PDGPJJMA_00429	1.74e-75	-	-	-	S	-	-	-	pathogenesis
PDGPJJMA_00430	2.86e-48	-	-	-	L	ko:K07483	-	ko00000	Psort location Cytoplasmic, score 8.87
PDGPJJMA_00431	5.6e-205	-	-	-	L	ko:K07493	-	ko00000	PFAM Transposase, Mutator family
PDGPJJMA_00432	3.39e-136	-	-	-	L	ko:K07483	-	ko00000	Integrase core domain
PDGPJJMA_00433	3.94e-17	-	-	-	L	-	-	-	Transposase
PDGPJJMA_00434	4.31e-129	-	-	-	K	-	-	-	cell envelope-related transcriptional attenuator
PDGPJJMA_00435	2.03e-302	-	-	-	-	-	-	-	-
PDGPJJMA_00436	5.86e-229	-	-	-	S	ko:K21688	-	ko00000	G5
PDGPJJMA_00437	2.57e-78	trxA	1.8.1.9	-	O	ko:K00384,ko:K03671	ko00450,ko04621,ko05418,map00450,map04621,map05418	ko00000,ko00001,ko01000,ko03110	Belongs to the thioredoxin family
PDGPJJMA_00438	1.35e-152	-	-	-	F	-	-	-	Domain of unknown function (DUF4916)
PDGPJJMA_00439	2.83e-203	-	-	-	I	-	-	-	Alpha/beta hydrolase family
PDGPJJMA_00440	7.82e-264	nudC	3.6.1.22	-	L	ko:K03426	ko00760,ko01100,ko04146,map00760,map01100,map04146	ko00000,ko00001,ko01000	NADH pyrophosphatase zinc ribbon domain
PDGPJJMA_00441	0.0	-	-	-	S	-	-	-	L,D-transpeptidase catalytic domain
PDGPJJMA_00442	2.17e-93	gcvH	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
PDGPJJMA_00443	0.0	-	-	-	S	-	-	-	Uncharacterized conserved protein (DUF2183)
PDGPJJMA_00444	0.0	ptrB	3.4.21.83	-	E	ko:K01354	ko05142,ko05143,map05142,map05143	ko00000,ko00001,ko01000,ko01002	Peptidase, S9A B C family, catalytic domain protein
PDGPJJMA_00445	3.62e-245	leuB	1.1.1.85	-	CE	ko:K00052	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PDGPJJMA_00447	4.93e-151	lplA	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Biotin/lipoate A/B protein ligase family
PDGPJJMA_00448	4.67e-173	crp	-	-	K	ko:K10914	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	helix_turn_helix, cAMP Regulatory protein
PDGPJJMA_00449	0.0	pon1	-	-	M	-	-	-	Transglycosylase
PDGPJJMA_00450	1.5e-277	namA	-	-	C	-	-	-	NADH:flavin oxidoreductase / NADH oxidase family
PDGPJJMA_00451	4.9e-288	pyrD	1.3.5.2, 1.3.98.1	-	F	ko:K00226,ko:K00254	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
PDGPJJMA_00452	1.2e-179	-	-	-	K	-	-	-	DeoR C terminal sensor domain
PDGPJJMA_00453	0.0	galT	2.7.7.12	-	C	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	Galactose-1-phosphate uridyl transferase, N-terminal domain
PDGPJJMA_00454	2.4e-296	galK	2.7.1.6, 2.7.7.12	-	G	ko:K00849,ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GHMP kinase family. GalK subfamily
PDGPJJMA_00455	1.32e-308	-	-	-	EGP	-	-	-	Sugar (and other) transporter
PDGPJJMA_00456	3.23e-58	-	-	-	T	ko:K07166	-	ko00000	Belongs to the UPF0237 family
PDGPJJMA_00457	0.0	-	-	-	S	ko:K09157	-	ko00000	UPF0210 protein
PDGPJJMA_00458	1.27e-170	-	-	-	-	-	-	-	-
PDGPJJMA_00461	1.06e-155	spoU	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PDGPJJMA_00462	1.31e-71	-	3.2.1.35	-	G	ko:K01197	ko00531,ko01100,map00531,map01100	ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042	Putative cell wall binding repeat
PDGPJJMA_00463	7.46e-42	exsH	3.2.1.178, 3.2.1.18, 3.2.1.52	GH16,GH20,GH33	G	ko:K01186,ko:K12373,ko:K20830	ko00511,ko00513,ko00520,ko00531,ko00600,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00600,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko02042,ko03110	xyloglucan:xyloglucosyl transferase activity
PDGPJJMA_00464	3.15e-236	mutY	-	-	L	ko:K03575	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	FES
PDGPJJMA_00465	1.66e-124	-	-	-	-	-	-	-	-
PDGPJJMA_00466	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDGPJJMA_00467	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDGPJJMA_00468	6.53e-125	-	-	-	T	-	-	-	Forkhead associated domain
PDGPJJMA_00469	5.65e-101	-	-	-	B	-	-	-	Belongs to the OprB family
PDGPJJMA_00470	5.53e-210	-	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	Sigma factor PP2C-like phosphatases
PDGPJJMA_00471	0.0	-	-	-	E	-	-	-	Transglutaminase-like superfamily
PDGPJJMA_00472	1.92e-300	-	-	-	S	-	-	-	Protein of unknown function DUF58
PDGPJJMA_00473	0.0	-	-	-	S	ko:K03924	-	ko00000,ko01000	ATPase family associated with various cellular activities (AAA)
PDGPJJMA_00474	0.0	-	-	-	S	-	-	-	Fibronectin type 3 domain
PDGPJJMA_00475	0.0	pknK	2.7.11.1	-	KLT	ko:K12132	-	ko00000,ko01000,ko01001	Protein tyrosine kinase
PDGPJJMA_00476	0.0	-	-	-	L	-	-	-	PD-(D/E)XK nuclease superfamily
PDGPJJMA_00477	0.0	uvrD2	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	Belongs to the helicase family. UvrD subfamily
PDGPJJMA_00478	2.67e-192	-	-	-	K	-	-	-	-acetyltransferase
PDGPJJMA_00479	2.64e-316	-	-	-	G	-	-	-	Major Facilitator Superfamily
PDGPJJMA_00480	3.22e-33	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
PDGPJJMA_00481	1.06e-76	-	-	-	L	-	-	-	Transposase
PDGPJJMA_00482	1.16e-169	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PDGPJJMA_00483	2.4e-207	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PDGPJJMA_00484	0.0	rnj	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PDGPJJMA_00485	0.0	pepN	3.4.11.2	-	E	ko:K01256,ko:K08776	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	Peptidase family M1 domain
PDGPJJMA_00486	8.12e-317	vpr	-	-	O	-	-	-	Subtilase family
PDGPJJMA_00487	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PDGPJJMA_00488	6.43e-160	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PDGPJJMA_00489	0.0	-	-	-	S	-	-	-	zinc finger
PDGPJJMA_00490	4.43e-138	vsr	-	-	L	ko:K07458	-	ko00000,ko01000,ko03400	May nick specific sequences that contain T G mispairs resulting from m5C-deamination
PDGPJJMA_00491	7.65e-293	aspB	2.6.1.1	-	E	ko:K00812	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase class-V
PDGPJJMA_00492	1.01e-61	ppx1	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	Ppx/GppA phosphatase family
PDGPJJMA_00493	4.8e-171	tmp1	-	-	S	-	-	-	Domain of unknown function (DUF4391)
PDGPJJMA_00494	8.74e-193	thiF	2.7.7.73, 2.7.7.80, 2.8.1.11	-	H	ko:K03148,ko:K21147	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000	ThiF family
PDGPJJMA_00495	0.0	-	-	-	OP	-	-	-	Sulfurtransferase TusA
PDGPJJMA_00496	1.65e-234	-	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Inosine-uridine preferring nucleoside hydrolase
PDGPJJMA_00497	4.35e-05	malR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
PDGPJJMA_00499	1.51e-258	-	-	-	S	ko:K18353	ko01502,ko02020,map01502,map02020	ko00000,ko00001,ko00002,ko01504	Endonuclease/Exonuclease/phosphatase family
PDGPJJMA_00500	1.47e-56	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDGPJJMA_00501	0.0	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDGPJJMA_00502	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Anaerobic ribonucleoside-triphosphate reductase
PDGPJJMA_00503	5.91e-179	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PDGPJJMA_00505	0.0	hgdC	-	-	I	-	-	-	CoA enzyme activase uncharacterised domain (DUF2229)
PDGPJJMA_00506	1.52e-210	-	-	-	-	-	-	-	-
PDGPJJMA_00507	0.0	egtA	6.3.2.2	-	H	ko:K01919	ko00270,ko00480,ko01100,map00270,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Glutamate-cysteine ligase family 2(GCS2)
PDGPJJMA_00511	2.25e-111	-	-	-	M	-	-	-	Parallel beta-helix repeats
PDGPJJMA_00513	1.67e-113	-	-	-	K	-	-	-	MarR family
PDGPJJMA_00514	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter, ATP-binding protein
PDGPJJMA_00515	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter transmembrane region
PDGPJJMA_00516	9.2e-220	-	-	-	S	-	-	-	Patatin-like phospholipase
PDGPJJMA_00517	5.49e-196	murI	5.1.1.3	-	M	ko:K01776	ko00471,ko01100,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
PDGPJJMA_00518	4.94e-214	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
PDGPJJMA_00519	4.82e-147	-	-	-	S	-	-	-	Vitamin K epoxide reductase
PDGPJJMA_00520	6e-212	PPA1328	3.1.3.97, 3.1.4.57	-	S	ko:K07053,ko:K20859	ko00440,map00440	ko00000,ko00001,ko01000	DNA polymerase alpha chain like domain
PDGPJJMA_00521	9.31e-44	-	-	-	S	-	-	-	Protein of unknown function (DUF3107)
PDGPJJMA_00522	0.0	mphA	-	-	S	-	-	-	Aminoglycoside phosphotransferase
PDGPJJMA_00523	0.0	uvrD2	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
PDGPJJMA_00524	0.0	-	-	-	S	-	-	-	Zincin-like metallopeptidase
PDGPJJMA_00525	1.18e-192	sdrC	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
PDGPJJMA_00526	2.24e-86	-	-	-	S	-	-	-	Protein of unknown function (DUF3052)
PDGPJJMA_00527	2.78e-248	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PDGPJJMA_00528	6.21e-81	-	-	-	S	-	-	-	Thiamine-binding protein
PDGPJJMA_00529	5.73e-208	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
PDGPJJMA_00530	3.43e-291	-	-	-	O	ko:K13525	ko04141,ko05134,map04141,map05134	ko00000,ko00001,ko00002,ko03019,ko04131,ko04147	AAA domain (Cdc48 subfamily)
PDGPJJMA_00531	1.62e-110	-	-	-	-	-	-	-	-
PDGPJJMA_00532	0.0	thiC	4.1.99.17	-	H	ko:K03147	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PDGPJJMA_00533	2.91e-201	thiM	2.7.1.50	-	H	ko:K00878	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PDGPJJMA_00541	2.58e-23	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Domain of unknown function (DUF4982)
PDGPJJMA_00542	0.0	glyQS	6.1.1.14	-	J	ko:K01880	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of glycine to tRNA(Gly)
PDGPJJMA_00543	8.15e-315	dus	-	-	J	-	-	-	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PDGPJJMA_00544	8.03e-295	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PDGPJJMA_00545	9.4e-105	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PDGPJJMA_00546	1.35e-56	-	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
PDGPJJMA_00547	1.65e-191	-	-	-	V	-	-	-	DivIVA protein
PDGPJJMA_00548	4.6e-148	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PDGPJJMA_00549	1.89e-225	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PDGPJJMA_00551	1.25e-82	-	-	-	-	-	-	-	-
PDGPJJMA_00552	2.62e-220	dapD	2.3.1.117	-	E	ko:K00674	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
PDGPJJMA_00553	5.51e-263	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PDGPJJMA_00554	2.02e-306	ftsE	-	-	D	ko:K09812	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03036	Cell division ATP-binding protein FtsE
PDGPJJMA_00555	2.48e-202	ftsX	-	-	D	ko:K09811	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03036	Part of the ABC transporter FtsEX involved in cellular division
PDGPJJMA_00556	2.15e-284	-	-	-	D	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	CHAP domain protein
PDGPJJMA_00557	1.38e-103	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PDGPJJMA_00558	1.81e-182	-	5.4.99.28, 5.4.99.29	-	J	ko:K06177	-	ko00000,ko01000,ko03009,ko03016	RNA pseudouridylate synthase
PDGPJJMA_00559	8.4e-27	-	-	-	-	-	-	-	-
PDGPJJMA_00560	8.09e-31	-	-	-	-	-	-	-	-
PDGPJJMA_00562	0.0	-	-	-	NU	-	-	-	Tfp pilus assembly protein FimV
PDGPJJMA_00563	4.35e-282	dxr	1.1.1.267	-	I	ko:K00099	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
PDGPJJMA_00564	8.04e-298	ispG	1.17.7.1, 1.17.7.3	-	I	ko:K03526	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
PDGPJJMA_00565	0.0	-	-	-	I	-	-	-	acetylesterase activity
PDGPJJMA_00566	3.54e-183	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
PDGPJJMA_00567	2.53e-198	uppS	2.5.1.31, 2.5.1.86, 2.5.1.88	-	H	ko:K00806,ko:K14215,ko:K21273	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PDGPJJMA_00568	1.65e-245	-	-	-	S	-	-	-	Domain of unknown function (DUF1963)
PDGPJJMA_00569	1.11e-53	cscA	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 32 family
PDGPJJMA_00570	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III alpha subunit
PDGPJJMA_00571	1.07e-163	-	-	-	S	-	-	-	zinc-ribbon domain
PDGPJJMA_00572	1.9e-62	-	-	-	J	ko:K07574	-	ko00000,ko03009	CRS1_YhbY
PDGPJJMA_00573	0.0	-	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	MCRA family
PDGPJJMA_00574	0.000175	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PDGPJJMA_00576	4.31e-259	-	-	-	K	-	-	-	WYL domain
PDGPJJMA_00577	5.5e-199	-	-	-	S	-	-	-	Aldo/keto reductase family
PDGPJJMA_00578	2.11e-221	dkgV	-	-	C	-	-	-	Aldo/keto reductase family
PDGPJJMA_00579	1.5e-100	-	-	-	S	-	-	-	Domain of unknown function (DUF4186)
PDGPJJMA_00581	2.68e-232	-	-	-	S	-	-	-	Protein conserved in bacteria
PDGPJJMA_00582	0.0	hisD	1.1.1.23	-	E	ko:K00013	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PDGPJJMA_00583	2.16e-284	hisC	2.6.1.9	-	E	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PDGPJJMA_00584	1.08e-145	hisB	3.1.3.15, 4.2.1.19	-	E	ko:K01089,ko:K01693	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Imidazoleglycerol-phosphate dehydratase
PDGPJJMA_00585	5.28e-151	-	-	-	-	-	-	-	-
PDGPJJMA_00586	1.35e-156	hisH	-	-	E	ko:K02501	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PDGPJJMA_00587	4.81e-167	hisA	5.3.1.16, 5.3.1.24	-	E	ko:K01814,ko:K01817	ko00340,ko00400,ko01100,ko01110,ko01130,ko01230,map00340,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Histidine biosynthesis protein
PDGPJJMA_00588	0.0	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2252)
PDGPJJMA_00589	0.0	glnA2	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
PDGPJJMA_00590	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF5067)
PDGPJJMA_00591	2e-75	-	-	-	EGP	ko:K08369	-	ko00000,ko02000	Major facilitator Superfamily
PDGPJJMA_00592	1.03e-242	-	-	-	M	-	-	-	Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
PDGPJJMA_00593	0.0	hrpA	3.6.4.13	-	L	ko:K03578	-	ko00000,ko01000	Helicase associated domain (HA2) Add an annotation
PDGPJJMA_00594	5.07e-157	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase (PrmA)
PDGPJJMA_00595	4.62e-224	-	-	-	-	-	-	-	-
PDGPJJMA_00596	0.0	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PDGPJJMA_00597	5.62e-226	ldh	1.1.1.27, 1.1.1.37	-	C	ko:K00016,ko:K00024	ko00010,ko00020,ko00270,ko00620,ko00630,ko00640,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04922,map00010,map00020,map00270,map00620,map00630,map00640,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200,map04922	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
PDGPJJMA_00598	1.07e-210	czcD	-	-	P	ko:K16264	-	ko00000,ko02000	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PDGPJJMA_00599	3.03e-166	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PDGPJJMA_00600	8.05e-64	-	-	-	M	-	-	-	Lysin motif
PDGPJJMA_00601	2.55e-107	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PDGPJJMA_00602	3.23e-290	serA	1.1.1.399, 1.1.1.95	-	EH	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
PDGPJJMA_00603	0.0	-	-	-	L	-	-	-	DNA helicase
PDGPJJMA_00604	8.85e-118	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
PDGPJJMA_00605	6.21e-246	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PDGPJJMA_00606	5.63e-97	-	-	-	D	-	-	-	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
PDGPJJMA_00607	0.0	ftsI	3.4.16.4	-	M	ko:K03587	ko00550,ko01501,map00550,map01501	ko00000,ko00001,ko01000,ko01011,ko03036	Penicillin-binding protein, transpeptidase domain protein
PDGPJJMA_00608	2.48e-231	-	-	-	M	-	-	-	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PDGPJJMA_00609	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PDGPJJMA_00610	8.76e-261	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PDGPJJMA_00611	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PDGPJJMA_00612	4.49e-297	ftsW	2.4.1.227	GT28	D	ko:K02563,ko:K03588	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011,ko02000,ko03036	Belongs to the SEDS family
PDGPJJMA_00613	3.15e-276	murG	2.4.1.227, 6.3.2.8	GT28	M	ko:K01924,ko:K02563	ko00471,ko00550,ko01100,ko01502,ko04112,map00471,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PDGPJJMA_00614	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
PDGPJJMA_00615	1.6e-229	ftsQ	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein FtsQ
PDGPJJMA_00618	2.9e-109	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PDGPJJMA_00619	3.73e-301	-	-	-	G	-	-	-	Major Facilitator Superfamily
PDGPJJMA_00620	2.87e-217	-	2.7.1.4	-	G	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	pfkB family carbohydrate kinase
PDGPJJMA_00621	5.33e-286	-	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
PDGPJJMA_00622	5.66e-168	cutC	-	-	P	ko:K06201	-	ko00000	Participates in the control of copper homeostasis
PDGPJJMA_00623	1.44e-276	-	-	-	GK	-	-	-	ROK family
PDGPJJMA_00624	5.93e-196	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PDGPJJMA_00625	4.41e-309	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Amidohydrolase family
PDGPJJMA_00626	0.0	-	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
PDGPJJMA_00627	5.3e-243	dppB	-	-	EP	ko:K02033	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PDGPJJMA_00628	5.32e-249	dppC	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PDGPJJMA_00629	0.0	-	-	-	P	ko:K02031,ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PDGPJJMA_00630	0.0	pepP	3.4.11.9	-	E	ko:K01262	-	ko00000,ko01000,ko01002	Aminopeptidase P, N-terminal domain
PDGPJJMA_00631	7.52e-126	-	-	-	F	-	-	-	NUDIX domain
PDGPJJMA_00633	0.0	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Mur ligase middle domain
PDGPJJMA_00634	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
PDGPJJMA_00635	1.46e-165	-	5.1.1.13	-	G	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
PDGPJJMA_00636	4.4e-310	-	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp
PDGPJJMA_00637	9.68e-293	-	2.6.1.33	-	M	ko:K20429	-	ko00000,ko01000	DegT/DnrJ/EryC1/StrS aminotransferase family
PDGPJJMA_00638	2.97e-243	-	-	-	V	-	-	-	Acetyltransferase (GNAT) domain
PDGPJJMA_00639	0.0	murE	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PDGPJJMA_00640	9.94e-149	sigH	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PDGPJJMA_00641	3.35e-84	-	-	-	-	-	-	-	-
PDGPJJMA_00642	7.58e-248	-	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
PDGPJJMA_00643	1.13e-231	ispH	1.17.7.4	-	IM	ko:K03527	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PDGPJJMA_00645	6.06e-119	ybaK	-	-	J	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PDGPJJMA_00646	3.39e-254	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PDGPJJMA_00647	4.14e-173	-	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Thiamin pyrophosphokinase, vitamin B1 binding domain
PDGPJJMA_00648	3.14e-39	-	-	-	S	-	-	-	Spermine/spermidine synthase domain
PDGPJJMA_00649	3.07e-137	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PDGPJJMA_00650	3.31e-35	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L35
PDGPJJMA_00651	5.46e-81	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PDGPJJMA_00652	2.91e-229	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
PDGPJJMA_00653	1.86e-194	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	CobQ CobB MinD ParA nucleotide binding domain protein
PDGPJJMA_00654	1.88e-190	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PDGPJJMA_00655	6.08e-145	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PDGPJJMA_00656	1.73e-190	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX hydrolase
PDGPJJMA_00657	0.0	nadA	2.5.1.72	-	H	ko:K03517	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
PDGPJJMA_00658	0.0	nadB	1.4.3.16, 2.4.2.19	-	H	ko:K00278,ko:K00767	ko00250,ko00760,ko01100,map00250,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of L-aspartate to iminoaspartate
PDGPJJMA_00659	3.33e-211	nadC	2.4.2.19	-	H	ko:K00767	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Quinolinate phosphoribosyl transferase, N-terminal domain
PDGPJJMA_00660	4.53e-301	iscS1	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class-V
PDGPJJMA_00661	0.0	typA	-	-	T	ko:K06207	-	ko00000	Elongation factor G C-terminus
PDGPJJMA_00662	3.17e-110	-	-	-	-	-	-	-	-
PDGPJJMA_00663	4.12e-253	pheA	4.2.1.51, 5.4.99.5	-	E	ko:K04518,ko:K14170	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Prephenate dehydratase
PDGPJJMA_00664	1.04e-245	tyrA	1.3.1.12	-	E	ko:K00210,ko:K04517	ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Prephenate dehydrogenase
PDGPJJMA_00665	2.67e-56	-	-	-	-	-	-	-	-
PDGPJJMA_00666	5.77e-237	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Belongs to the 'phage' integrase family. XerC subfamily
PDGPJJMA_00667	4.8e-226	oppB1	-	-	EP	ko:K02033	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PDGPJJMA_00668	1.07e-211	oppC	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	N-terminal TM domain of oligopeptide transport permease C
PDGPJJMA_00669	0.0	oppD	-	-	P	ko:K02031,ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PDGPJJMA_00670	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
PDGPJJMA_00671	0.0	-	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
PDGPJJMA_00672	2.87e-215	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Endonuclease/Exonuclease/phosphatase family
PDGPJJMA_00673	2.66e-196	-	-	-	S	-	-	-	Protein of unknown function (DUF3710)
PDGPJJMA_00674	1.54e-171	-	-	-	S	-	-	-	Protein of unknown function (DUF3159)
PDGPJJMA_00675	1.9e-315	rumA	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PDGPJJMA_00676	4.91e-144	-	-	-	-	-	-	-	-
PDGPJJMA_00677	0.0	ctpE	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
PDGPJJMA_00679	1.22e-15	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.87
PDGPJJMA_00680	0.0	-	-	-	E	-	-	-	Serine carboxypeptidase
PDGPJJMA_00681	1.72e-208	gpmB	3.1.3.85, 5.4.2.11	-	G	ko:K01834,ko:K22306	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Phosphoglycerate mutase family
PDGPJJMA_00682	1.72e-218	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
PDGPJJMA_00683	1.53e-213	-	-	-	ET	ko:K10005	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial periplasmic substrate-binding proteins
PDGPJJMA_00684	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
PDGPJJMA_00685	1.41e-160	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Helix-hairpin-helix motif
PDGPJJMA_00686	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein
PDGPJJMA_00687	2.59e-232	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
PDGPJJMA_00688	6.31e-153	tsaE	-	-	S	ko:K06925	-	ko00000,ko03016	Threonylcarbamoyl adenosine biosynthesis protein TsaE
PDGPJJMA_00689	1.03e-202	yeaZ	-	-	O	ko:K14742	-	ko00000,ko03016	Glycoprotease family
PDGPJJMA_00690	4.23e-135	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	FR47-like protein
PDGPJJMA_00691	1.61e-250	tsaD	2.3.1.234	-	O	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PDGPJJMA_00693	2.13e-215	-	-	-	M	-	-	-	Peptidase family M23
PDGPJJMA_00694	0.0	fadD1	6.2.1.3	-	I	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	AMP-binding enzyme
PDGPJJMA_00695	0.0	-	-	-	G	-	-	-	ABC transporter substrate-binding protein
PDGPJJMA_00696	1.35e-306	icd	1.1.1.42	-	C	ko:K00031	ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146	br01601,ko00000,ko00001,ko00002,ko01000	Belongs to the isocitrate and isopropylmalate dehydrogenases family
PDGPJJMA_00697	1.59e-255	guaB3	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	IMP dehydrogenase family protein
PDGPJJMA_00698	5.1e-118	-	-	-	-	-	-	-	-
PDGPJJMA_00699	0.0	fadD3	6.2.1.3	-	I	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	long-chain-fatty acid CoA ligase
PDGPJJMA_00700	1.05e-113	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PDGPJJMA_00701	3.07e-188	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
PDGPJJMA_00702	4.78e-188	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PDGPJJMA_00703	3.84e-165	-	-	-	S	-	-	-	alpha beta
PDGPJJMA_00704	6.31e-171	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
PDGPJJMA_00705	7.62e-120	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PDGPJJMA_00706	1.27e-226	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Cytidylyltransferase family
PDGPJJMA_00707	2.1e-289	rlmN	2.1.1.192	-	J	ko:K06941	-	ko00000,ko01000,ko03009	Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PDGPJJMA_00708	1.82e-179	hisF	4.1.3.27	-	E	ko:K01657,ko:K02500	ko00340,ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00340,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PDGPJJMA_00709	2.42e-96	hisI	3.5.4.19, 3.6.1.31	-	E	ko:K01496,ko:K11755	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PDGPJJMA_00710	0.0	trpE	4.1.3.27	-	E	ko:K01657	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PDGPJJMA_00711	4.29e-311	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PDGPJJMA_00712	5.59e-223	-	-	-	G	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PDGPJJMA_00713	4.73e-216	-	-	-	G	ko:K02026	-	ko00000,ko00002,ko02000	ABC transporter permease
PDGPJJMA_00714	0.0	gnpA	2.4.1.211	-	S	ko:K15533	-	ko00000,ko01000	Lacto-N-biose phosphorylase C-terminal domain
PDGPJJMA_00715	4.48e-228	-	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
PDGPJJMA_00716	6.1e-276	-	-	-	GK	-	-	-	ROK family
PDGPJJMA_00717	1.41e-263	-	2.7.1.162	-	S	ko:K13059	-	ko00000,ko01000	Phosphotransferase enzyme family
PDGPJJMA_00718	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
PDGPJJMA_00719	1.68e-253	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
PDGPJJMA_00720	0.0	ybiT	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter
PDGPJJMA_00721	1.39e-179	-	3.4.17.14	-	M	ko:K07260	ko00550,ko01100,ko01502,ko02020,map00550,map01100,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	D-alanyl-D-alanine carboxypeptidase
PDGPJJMA_00722	0.0	-	2.7.13.3	-	T	ko:K18351	ko01502,ko02020,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko01504,ko02022	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PDGPJJMA_00723	2.13e-151	-	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
PDGPJJMA_00725	3.11e-77	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	MacB-like periplasmic core domain
PDGPJJMA_00726	7.81e-115	-	-	-	-	-	-	-	-
PDGPJJMA_00727	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PDGPJJMA_00728	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PDGPJJMA_00729	4.13e-228	aroE	1.1.1.25	-	E	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Shikimate dehydrogenase substrate binding domain
PDGPJJMA_00730	4.29e-227	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
PDGPJJMA_00731	3.23e-222	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
PDGPJJMA_00732	6.71e-284	pgk	2.7.2.3, 5.3.1.1	-	F	ko:K00927,ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Phosphoglycerate kinase
PDGPJJMA_00733	3.84e-189	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PDGPJJMA_00734	1.2e-45	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase SecG subunit
PDGPJJMA_00735	1.23e-227	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily
PDGPJJMA_00736	2.44e-208	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PDGPJJMA_00737	3.01e-308	-	-	-	V	-	-	-	MatE
PDGPJJMA_00740	0.0	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
PDGPJJMA_00741	3.12e-182	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
PDGPJJMA_00742	4.49e-258	tal	2.2.1.2	-	H	ko:K00616	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PDGPJJMA_00743	0.0	tkt	2.2.1.1	-	H	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the transketolase family
PDGPJJMA_00744	2.17e-284	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PDGPJJMA_00745	6.31e-273	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PDGPJJMA_00746	8.17e-204	-	-	-	G	-	-	-	Fructosamine kinase
PDGPJJMA_00747	8.18e-216	uppP	3.6.1.27	-	V	ko:K06153	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PDGPJJMA_00748	2.89e-199	-	-	-	S	-	-	-	PAC2 family
PDGPJJMA_00752	0.0	-	-	-	-	-	-	-	-
PDGPJJMA_00755	0.0	-	-	-	U	ko:K06956	-	ko00000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PDGPJJMA_00756	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PDGPJJMA_00757	0.0	-	3.2.1.52	GH20	M	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	Glycosyl hydrolase family 20, catalytic domain
PDGPJJMA_00758	2.79e-176	yebC	-	-	K	-	-	-	transcriptional regulatory protein
PDGPJJMA_00759	2.64e-129	ruvC	3.1.22.4	-	L	ko:K01159	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
PDGPJJMA_00761	1.06e-134	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PDGPJJMA_00762	3.28e-257	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PDGPJJMA_00763	3.73e-72	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase subunit
PDGPJJMA_00764	1.59e-130	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PDGPJJMA_00765	2.85e-285	sucC	6.2.1.5	-	F	ko:K01903	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
PDGPJJMA_00766	4.72e-212	sucD	6.2.1.5	-	C	ko:K01902	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
PDGPJJMA_00767	3.85e-314	-	-	-	-	-	-	-	-
PDGPJJMA_00768	0.0	purH	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	Bifunctional purine biosynthesis protein PurH
PDGPJJMA_00769	5.17e-56	-	-	-	-	-	-	-	-
PDGPJJMA_00770	9.88e-167	-	-	-	U	ko:K06188	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
PDGPJJMA_00771	4.49e-185	rluB	5.4.99.19, 5.4.99.22	-	J	ko:K06178,ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
PDGPJJMA_00772	0.0	der	-	-	F	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
PDGPJJMA_00773	0.0	trpB	4.2.1.20	-	E	ko:K01696	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PDGPJJMA_00774	2.26e-210	trpA	4.2.1.20	-	E	ko:K01695	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PDGPJJMA_00775	3.87e-238	lgt	-	-	M	-	-	-	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PDGPJJMA_00776	8.92e-144	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribulose-phosphate 3-epimerase
PDGPJJMA_00777	1.2e-54	hisE	3.6.1.31	-	E	ko:K01523	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Phosphoribosyl-ATP pyrophosphohydrolase
PDGPJJMA_00778	1.07e-200	hisG	2.4.2.17	-	F	ko:K00765,ko:K02502	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	ATP phosphoribosyltransferase
PDGPJJMA_00779	2.22e-151	pgsA2	2.7.8.41, 2.7.8.5	-	I	ko:K00995,ko:K08744	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PDGPJJMA_00780	2.27e-222	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF881)
PDGPJJMA_00781	2.78e-57	sbp	-	-	S	-	-	-	Protein of unknown function (DUF1290)
PDGPJJMA_00782	7.92e-182	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF881)
PDGPJJMA_00783	2.88e-96	garA	-	-	T	-	-	-	Inner membrane component of T3SS, cytoplasmic domain
PDGPJJMA_00784	1.19e-154	merR2	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PDGPJJMA_00785	8.13e-82	-	-	-	-	-	-	-	-
PDGPJJMA_00787	2.96e-31	-	-	-	L	-	-	-	DNA integration
PDGPJJMA_00788	4.36e-162	-	-	-	S	-	-	-	GyrI-like small molecule binding domain
PDGPJJMA_00789	1.23e-116	-	-	-	K	-	-	-	Putative zinc ribbon domain
PDGPJJMA_00792	5.93e-183	nt5e	3.1.3.18	-	S	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	HAD-hyrolase-like
PDGPJJMA_00793	1.11e-81	rbpA	-	-	K	-	-	-	Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
PDGPJJMA_00794	0.0	helY	-	-	L	ko:K03727	-	ko00000,ko01000	DEAD DEAH box helicase
PDGPJJMA_00795	2.14e-69	-	-	-	-	-	-	-	-
PDGPJJMA_00796	0.0	-	-	-	K	-	-	-	WYL domain
PDGPJJMA_00797	0.0	ugp	2.7.7.9	-	G	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
PDGPJJMA_00799	3.58e-115	dkg	-	-	S	-	-	-	Oxidoreductase, aldo keto reductase family protein
PDGPJJMA_00800	7.48e-186	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
PDGPJJMA_00801	0.0	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PDGPJJMA_00802	7.85e-157	-	3.8.1.2	-	S	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
PDGPJJMA_00803	1.23e-221	-	-	-	K	-	-	-	Bacterial regulatory helix-turn-helix protein, lysR family
PDGPJJMA_00804	6.5e-119	-	-	-	T	-	-	-	Domain of unknown function (DUF4234)
PDGPJJMA_00805	1.66e-131	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PDGPJJMA_00806	2.54e-24	-	-	-	-	-	-	-	-
PDGPJJMA_00807	1.02e-64	tam	2.1.1.144, 2.1.1.197	-	FG	ko:K00598,ko:K02169	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	trans-aconitate 2-methyltransferase activity
PDGPJJMA_00808	1.17e-54	-	-	-	K	-	-	-	Helix-turn-helix
PDGPJJMA_00809	5.71e-284	-	2.7.11.1	-	S	ko:K07154	-	ko00000,ko01000,ko01001,ko02048	HipA N-terminal domain
PDGPJJMA_00810	6.48e-91	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Cupin domain
PDGPJJMA_00811	1.13e-226	-	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
PDGPJJMA_00812	1.51e-121	-	-	-	K	-	-	-	Transcriptional regulator PadR-like family
PDGPJJMA_00813	2.21e-171	-	-	-	L	ko:K07457	-	ko00000	endonuclease III
PDGPJJMA_00814	1.39e-168	-	-	-	S	-	-	-	Enoyl-(Acyl carrier protein) reductase
PDGPJJMA_00815	9.36e-310	-	-	-	V	-	-	-	MatE
PDGPJJMA_00816	0.0	uvrA3	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
PDGPJJMA_00817	1.36e-19	-	-	-	KLT	-	-	-	Protein tyrosine kinase
PDGPJJMA_00819	2.8e-207	-	-	-	-	-	-	-	-
PDGPJJMA_00820	2.19e-248	adh	1.1.1.1	-	C	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Zinc-binding dehydrogenase
PDGPJJMA_00821	1.84e-13	-	-	-	K	-	-	-	MerR family regulatory protein
PDGPJJMA_00822	2.04e-159	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PDGPJJMA_00823	2.89e-229	pyrD	1.3.1.14	-	F	ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PDGPJJMA_00824	3.07e-201	pyrK	-	-	C	ko:K02823	ko00240,ko01100,map00240,map01100	ko00000,ko00001	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
PDGPJJMA_00825	3.99e-231	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the OMP decarboxylase family. Type 2 subfamily
PDGPJJMA_00826	0.0	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PDGPJJMA_00827	1.83e-96	pyrI	-	-	F	ko:K00610	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002	Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
PDGPJJMA_00828	2.23e-233	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
PDGPJJMA_00829	0.0	glnE	2.7.7.42, 2.7.7.89	-	H	ko:K00982	-	ko00000,ko01000	Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
PDGPJJMA_00831	2.35e-208	metF	1.5.1.20	-	E	ko:K00297	ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523	ko00000,ko00001,ko00002,ko01000	Methylenetetrahydrofolate reductase
PDGPJJMA_00832	0.0	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PDGPJJMA_00833	2.04e-129	sixA	-	-	T	ko:K08296	-	ko00000,ko01000	Phosphoglycerate mutase family
PDGPJJMA_00834	6.99e-266	trmI	2.1.1.219, 2.1.1.220	-	J	ko:K07442	-	ko00000,ko01000,ko03016	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
PDGPJJMA_00835	1.62e-227	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PDGPJJMA_00836	8.54e-126	-	-	-	E	-	-	-	Rard protein
PDGPJJMA_00837	1.61e-40	-	-	-	-	-	-	-	-
PDGPJJMA_00838	0.0	-	-	-	L	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
PDGPJJMA_00839	6.17e-73	-	-	-	S	-	-	-	MazG-like family
PDGPJJMA_00840	1.35e-38	-	-	-	-	ko:K07485	-	ko00000	-
PDGPJJMA_00841	1.29e-225	-	-	-	L	ko:K07485	-	ko00000	Transposase
PDGPJJMA_00842	1.07e-237	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PDGPJJMA_00843	6.79e-143	-	-	-	S	ko:K07126	-	ko00000	Sel1-like repeats.
PDGPJJMA_00844	1.47e-198	-	-	-	S	ko:K11206	-	ko00000,ko01000	Carbon-nitrogen hydrolase
PDGPJJMA_00845	4.56e-209	ylmA	3.6.3.34	-	P	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
PDGPJJMA_00846	1.37e-311	glgA	2.4.1.342	GT4	G	ko:K16148	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000,ko01003	Starch synthase catalytic domain
PDGPJJMA_00847	5.23e-107	-	-	-	-	-	-	-	-
PDGPJJMA_00848	0.0	gltD	1.4.1.13, 1.4.1.14	-	C	ko:K00266	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
PDGPJJMA_00849	0.0	gltB	1.4.1.13, 1.4.1.14, 1.4.7.1	-	E	ko:K00265,ko:K00284	ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	glutamate synthase NADPH large subunit
PDGPJJMA_00850	0.0	tetM	-	-	J	ko:K18220	-	br01600,ko00000,ko01504	Elongation factor G, domain IV
PDGPJJMA_00851	0.0	aspC	2.6.1.1, 2.6.1.2, 2.6.1.66	-	E	ko:K00812,ko:K08969,ko:K10907,ko:K14260	ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase, class I II
PDGPJJMA_00852	3.3e-312	hemN	-	-	H	-	-	-	Involved in the biosynthesis of porphyrin-containing compound
PDGPJJMA_00853	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PDGPJJMA_00854	3.91e-46	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
PDGPJJMA_00855	1.61e-175	-	-	-	S	-	-	-	UPF0126 domain
PDGPJJMA_00856	9.66e-126	-	-	-	T	-	-	-	RNA ligase
PDGPJJMA_00857	1.65e-61	-	-	-	S	-	-	-	phosphoesterase or phosphohydrolase
PDGPJJMA_00858	1.11e-287	ilvE	2.6.1.42	-	E	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Amino-transferase class IV
PDGPJJMA_00859	1.66e-128	ctc	-	-	J	ko:K02897	ko03010,map03010	ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PDGPJJMA_00860	2.09e-242	-	-	-	S	ko:K06889	-	ko00000	alpha beta
PDGPJJMA_00861	1.72e-306	pntB	1.6.1.2	-	C	ko:K00325	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
PDGPJJMA_00862	1.08e-58	pntAB	1.6.1.2	-	C	ko:K00324	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	4TM region of pyridine nucleotide transhydrogenase, mitoch
PDGPJJMA_00863	6.9e-259	pntA	1.6.1.2	-	C	ko:K00324	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	NAD(P) transhydrogenase subunit alpha part 1 K00324
PDGPJJMA_00864	0.0	fadD2	6.2.1.3	-	I	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	AMP-binding enzyme
PDGPJJMA_00865	1.96e-236	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PDGPJJMA_00866	0.0	corC	-	-	S	-	-	-	CBS domain
PDGPJJMA_00867	1.82e-130	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PDGPJJMA_00868	4.28e-253	phoH	-	-	T	ko:K06217	-	ko00000	PhoH-like protein
PDGPJJMA_00869	1.13e-75	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
PDGPJJMA_00870	2.54e-174	-	2.1.1.193	-	J	ko:K09761	-	ko00000,ko01000,ko03009	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PDGPJJMA_00872	1.78e-208	spoU2	-	-	J	-	-	-	SpoU rRNA Methylase family
PDGPJJMA_00873	1.42e-308	glgC	2.7.7.27	-	H	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PDGPJJMA_00874	2.56e-141	-	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
PDGPJJMA_00875	4.14e-132	iscU	-	-	C	ko:K04488	-	ko00000	SUF system FeS assembly protein, NifU family
PDGPJJMA_00876	3.62e-306	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PDGPJJMA_00877	2.13e-185	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	FeS assembly ATPase SufC
PDGPJJMA_00878	2.5e-299	sufD	-	-	O	ko:K09015	-	ko00000	FeS assembly protein SufD
PDGPJJMA_00879	0.0	sufB	-	-	O	ko:K09014	-	ko00000	FeS assembly protein SufB
PDGPJJMA_00880	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PDGPJJMA_00881	1.31e-05	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase (surface protein transpeptidase)
PDGPJJMA_00882	3.46e-154	-	-	-	K	-	-	-	helix_turn_helix, Lux Regulon
PDGPJJMA_00883	5e-126	-	-	-	-	-	-	-	-
PDGPJJMA_00884	1.6e-103	aroQ	4.2.1.10	-	E	ko:K03786	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes a trans-dehydration via an enolate intermediate
PDGPJJMA_00885	0.0	aroB	2.7.1.71, 4.2.3.4	-	H	ko:K01735,ko:K13829	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PDGPJJMA_00886	1.57e-280	aroC	4.2.3.5	-	E	ko:K01736	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PDGPJJMA_00887	5.3e-69	-	3.4.23.43	-	S	ko:K02654	-	ko00000,ko00002,ko01000,ko01002,ko02035,ko02044	Type IV leader peptidase family
PDGPJJMA_00888	4.48e-247	mltG	-	-	S	ko:K07082	-	ko00000	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PDGPJJMA_00889	6.58e-99	ruvX	-	-	L	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PDGPJJMA_00890	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PDGPJJMA_00891	7.33e-50	-	-	-	-	-	-	-	-
PDGPJJMA_00892	4.03e-85	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF948)
PDGPJJMA_00893	4.37e-173	-	5.4.2.12	-	G	ko:K15634	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Phosphoglycerate mutase family
PDGPJJMA_00894	5.25e-277	-	-	-	I	-	-	-	Psort location CytoplasmicMembrane, score 9.99
PDGPJJMA_00895	4.51e-186	-	-	-	I	-	-	-	Psort location CytoplasmicMembrane, score 9.99
PDGPJJMA_00896	1.83e-141	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PDGPJJMA_00897	2.83e-174	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
PDGPJJMA_00898	1.87e-271	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PDGPJJMA_00899	1.22e-84	-	-	-	S	-	-	-	Domain of unknown function (DUF4418)
PDGPJJMA_00900	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
PDGPJJMA_00901	0.0	yrhL	-	-	I	-	-	-	Psort location CytoplasmicMembrane, score 9.99
PDGPJJMA_00902	6.52e-139	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PDGPJJMA_00903	7.11e-309	pbuX	-	-	F	ko:K03458	-	ko00000	Permease family
PDGPJJMA_00905	1.25e-54	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PDGPJJMA_00907	4.2e-145	pncA	3.5.1.19	-	Q	ko:K08281	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Isochorismatase family
PDGPJJMA_00908	2.77e-54	-	-	-	-	-	-	-	-
PDGPJJMA_00909	5.58e-33	-	-	-	S	-	-	-	Adenine-specific methyltransferase EcoRI
PDGPJJMA_00910	2.92e-232	tnp3521a2	-	-	L	-	-	-	Integrase core domain
PDGPJJMA_00911	9e-64	-	-	-	L	ko:K07483	-	ko00000	Transposase
PDGPJJMA_00912	4.19e-84	-	-	-	D	-	-	-	MobA/MobL family
PDGPJJMA_00913	7.48e-215	-	-	-	L	-	-	-	Transposase and inactivated derivatives IS30 family
PDGPJJMA_00914	3.34e-102	-	-	-	-	-	-	-	-
PDGPJJMA_00916	7.18e-260	-	-	-	L	-	-	-	Transposase and inactivated derivatives IS30 family
PDGPJJMA_00917	0.0	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
PDGPJJMA_00918	0.0	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PDGPJJMA_00919	2.77e-290	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PDGPJJMA_00920	2.22e-231	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PDGPJJMA_00921	1.06e-57	pacL	3.6.3.8, 3.6.3.9	-	P	ko:K01537,ko:K01539	ko04022,ko04024,ko04260,ko04261,ko04911,ko04918,ko04919,ko04925,ko04960,ko04961,ko04964,ko04970,ko04971,ko04972,ko04973,ko04974,ko04976,ko04978,map04022,map04024,map04260,map04261,map04911,map04918,map04919,map04925,map04960,map04961,map04964,map04970,map04971,map04972,map04973,map04974,map04976,map04978	ko00000,ko00001,ko01000,ko04147	ATPase, P-type transporting, HAD superfamily, subfamily IC
PDGPJJMA_00922	1.45e-298	-	-	-	T	-	-	-	Histidine kinase
PDGPJJMA_00923	9.31e-155	-	-	-	K	-	-	-	helix_turn_helix, Lux Regulon
PDGPJJMA_00924	4.91e-150	-	-	-	P	ko:K07220	-	ko00000	Protein of unknown function DUF47
PDGPJJMA_00925	7.55e-243	pitB	-	-	P	ko:K03306	-	ko00000	Phosphate transporter family
PDGPJJMA_00926	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
PDGPJJMA_00927	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
PDGPJJMA_00928	3.12e-69	-	-	-	L	-	-	-	PFAM Integrase catalytic
PDGPJJMA_00929	1.64e-53	-	-	-	L	-	-	-	transposition
PDGPJJMA_00930	9.39e-170	-	-	-	L	-	-	-	transposase activity
PDGPJJMA_00931	3.46e-139	-	2.1.1.37	-	H	ko:K00558	ko00270,ko01100,ko05206,map00270,map01100,map05206	ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036	C-5 cytosine-specific DNA methylase
PDGPJJMA_00932	3.77e-104	-	-	-	-	-	-	-	-
PDGPJJMA_00933	2.5e-114	-	-	-	L	ko:K07485	-	ko00000	Transposase
PDGPJJMA_00935	0.0	pta	2.3.1.8	-	C	ko:K13788	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	phosphate acetyltransferase
PDGPJJMA_00936	1.39e-296	ackA	2.7.2.1	-	H	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PDGPJJMA_00937	0.0	aroA	2.5.1.19	-	E	ko:K00800	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PDGPJJMA_00938	9.85e-140	pepE	3.4.13.21	-	E	ko:K05995	-	ko00000,ko01000,ko01002	Peptidase family S51
PDGPJJMA_00940	1.37e-164	-	-	-	-	-	-	-	-
PDGPJJMA_00941	9.75e-131	-	3.5.1.124	-	S	ko:K05520	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
PDGPJJMA_00942	7.87e-209	-	-	-	S	-	-	-	Aldo/keto reductase family
PDGPJJMA_00943	2.62e-90	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PDGPJJMA_00944	3.5e-97	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PDGPJJMA_00945	4.21e-21	-	-	-	U	-	-	-	Major Facilitator Superfamily
PDGPJJMA_00946	5.61e-23	-	-	-	K	ko:K03830	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
PDGPJJMA_00947	1.3e-58	-	-	-	K	ko:K03830	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
PDGPJJMA_00948	2.38e-20	-	-	-	-	-	-	-	-
PDGPJJMA_00950	5.92e-280	-	-	-	-	-	-	-	-
PDGPJJMA_00951	0.0	glgX	3.2.1.68	CBM48,GH13	G	ko:K01214	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the glycosyl hydrolase 13 family
PDGPJJMA_00952	2.29e-154	-	-	-	L	-	-	-	NUDIX domain
PDGPJJMA_00953	1.09e-220	-	-	-	L	-	-	-	NIF3 (NGG1p interacting factor 3)
PDGPJJMA_00954	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PDGPJJMA_00955	5.44e-161	pdtaR	-	-	T	ko:K22010	-	ko00000,ko00002,ko02022	Response regulator receiver domain protein
PDGPJJMA_00957	3.31e-140	aspA	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
PDGPJJMA_00958	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Pyruvate kinase
PDGPJJMA_00959	8.33e-230	terC	-	-	P	ko:K05794	-	ko00000	Integral membrane protein, TerC family
PDGPJJMA_00960	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PDGPJJMA_00961	2.24e-139	coaE	2.7.1.24	-	H	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PDGPJJMA_00962	0.0	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
PDGPJJMA_00963	2.97e-211	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PDGPJJMA_00964	1.55e-232	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Zinc-uptake complex component A periplasmic
PDGPJJMA_00965	1.15e-209	-	-	-	P	ko:K02074	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PDGPJJMA_00966	2.15e-177	znuB	-	-	U	ko:K02075	-	ko00000,ko00002,ko02000	ABC 3 transport family
PDGPJJMA_00967	2.56e-108	ispF	2.7.7.60, 4.6.1.12	-	H	ko:K01770,ko:K12506	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
PDGPJJMA_00968	1.99e-131	carD	-	-	K	ko:K07736	-	ko00000,ko03000	CarD-like/TRCF domain
PDGPJJMA_00969	0.0	glgB	2.4.1.18	CBM48,GH13	G	ko:K00700	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PDGPJJMA_00970	9.32e-164	cseB	-	-	T	-	-	-	Response regulator receiver domain protein
PDGPJJMA_00971	4.85e-258	-	-	-	T	-	-	-	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDGPJJMA_00972	6.22e-91	umuD	-	-	KT	ko:K03503	-	ko00000,ko01000,ko01002,ko03400	Peptidase S24-like
PDGPJJMA_00973	1.1e-166	pyrE_1	-	-	S	-	-	-	Phosphoribosyl transferase domain
PDGPJJMA_00974	2.33e-200	-	-	-	T	-	-	-	Eukaryotic phosphomannomutase
PDGPJJMA_00975	1.05e-85	-	-	-	S	-	-	-	Zincin-like metallopeptidase
PDGPJJMA_00976	0.0	-	-	-	-	-	-	-	-
PDGPJJMA_00977	0.0	-	-	-	S	-	-	-	Glycosyl transferase, family 2
PDGPJJMA_00978	2.82e-72	whiB2	-	-	K	ko:K18955	-	ko00000,ko03000	Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
PDGPJJMA_00979	0.0	lytR2	-	-	K	-	-	-	Cell envelope-related transcriptional attenuator domain
PDGPJJMA_00980	0.0	-	-	-	D	ko:K03466	-	ko00000,ko03036	FtsK/SpoIIIE family
PDGPJJMA_00981	6.69e-61	whiB	-	-	K	ko:K18955	-	ko00000,ko03000	Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
PDGPJJMA_00982	0.0	pdtaS	2.7.13.3	-	T	ko:K00936	-	ko00000,ko00002,ko01000,ko01001,ko02022	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDGPJJMA_00983	1.95e-193	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	Haemolysin-III related
PDGPJJMA_00984	3.77e-139	-	-	-	-	-	-	-	-
PDGPJJMA_00986	1.67e-104	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PDGPJJMA_00987	7.02e-94	fkbP	5.2.1.8	-	G	ko:K01802	-	ko00000,ko01000	Peptidyl-prolyl cis-trans
PDGPJJMA_00988	0.0	sdaA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase alpha chain
PDGPJJMA_00989	4.4e-126	-	-	-	-	-	-	-	-
PDGPJJMA_00991	4.85e-233	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	Ppx/GppA phosphatase family
PDGPJJMA_00992	5.14e-137	-	-	-	S	ko:K09009	-	ko00000	Protein of unknown function (DUF501)
PDGPJJMA_00993	2.95e-131	-	-	-	D	-	-	-	Septum formation initiator
PDGPJJMA_00994	7.41e-315	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PDGPJJMA_00995	2.04e-194	pabC	2.6.1.42, 2.6.1.85, 4.1.3.38	-	E	ko:K00826,ko:K01665,ko:K02619,ko:K03342	ko00270,ko00280,ko00290,ko00770,ko00790,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map00790,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	branched-chain-amino-acid transaminase activity
PDGPJJMA_00996	0.0	pabB	2.6.1.85, 4.1.3.27, 4.1.3.38	-	EH	ko:K01657,ko:K01665,ko:K03342,ko:K13950	ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000,ko01007	chorismate binding enzyme
PDGPJJMA_00997	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PDGPJJMA_00998	3.48e-146	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PDGPJJMA_00999	9.1e-127	-	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	Acetyltransferase (GNAT) domain
PDGPJJMA_01000	1.97e-186	rfbB2	3.6.3.40	-	GM	ko:K01990,ko:K09691,ko:K09693	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
PDGPJJMA_01001	1.2e-194	-	-	-	GM	ko:K09692	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-2 type transporter
PDGPJJMA_01002	3.47e-252	-	-	-	GM	-	-	-	GDP-mannose 4,6 dehydratase
PDGPJJMA_01003	2.58e-165	ispD	2.7.7.60	-	I	ko:K00991	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
PDGPJJMA_01006	3.3e-281	-	-	-	I	ko:K13663	-	ko00000,ko01000	transferase activity, transferring acyl groups other than amino-acyl groups
PDGPJJMA_01007	0.0	-	2.7.8.14, 2.7.8.47	-	M	ko:K18704	-	ko00000,ko01000	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PDGPJJMA_01008	2.04e-263	-	2.7.8.14, 2.7.8.47	-	M	ko:K18704	-	ko00000,ko01000	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PDGPJJMA_01009	0.0	-	-	-	S	ko:K09118	-	ko00000	Uncharacterised protein family (UPF0182)
PDGPJJMA_01010	1.7e-298	-	3.2.1.52	-	G	ko:K01207	ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501	ko00000,ko00001,ko00002,ko01000	Glycosyl hydrolase family 3 N-terminal domain protein
PDGPJJMA_01011	1.88e-251	-	-	-	-	-	-	-	-
PDGPJJMA_01012	2.61e-94	-	-	-	V	ko:K02003,ko:K09810	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
PDGPJJMA_01013	6.6e-85	-	-	-	V	ko:K02003,ko:K09810	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
PDGPJJMA_01014	1.85e-245	-	-	-	V	-	-	-	N-Acetylmuramoyl-L-alanine amidase
PDGPJJMA_01015	0.0	argE	-	-	E	-	-	-	Peptidase dimerisation domain
PDGPJJMA_01016	2.07e-134	-	-	-	S	-	-	-	Protein of unknown function (DUF3043)
PDGPJJMA_01017	0.0	lpdA	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PDGPJJMA_01018	3.01e-182	-	-	-	S	-	-	-	Domain of unknown function (DUF4191)
PDGPJJMA_01019	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
PDGPJJMA_01020	8.24e-203	-	-	-	S	-	-	-	Protein conserved in bacteria
PDGPJJMA_01021	8.24e-270	mrp	-	-	D	ko:K03593	-	ko00000,ko03029,ko03036	Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
PDGPJJMA_01022	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PDGPJJMA_01023	0.0	-	-	-	S	-	-	-	Tetratricopeptide repeat
PDGPJJMA_01024	0.0	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PDGPJJMA_01025	1.26e-87	-	2.8.2.22	-	S	ko:K01023	-	ko00000,ko01000	Arylsulfotransferase Ig-like domain
PDGPJJMA_01026	4.43e-178	-	-	-	P	ko:K16784	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
PDGPJJMA_01027	3.37e-270	-	-	-	E	-	-	-	Aminotransferase class I and II
PDGPJJMA_01028	4.47e-178	ppgK	2.7.1.2, 2.7.1.63	-	GK	ko:K00845,ko:K00886	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
PDGPJJMA_01029	2.4e-136	-	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PDGPJJMA_01030	0.0	-	-	-	GP	ko:K16785,ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PDGPJJMA_01031	0.0	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PDGPJJMA_01033	0.0	rarA	-	-	L	ko:K07478	-	ko00000	Recombination factor protein RarA
PDGPJJMA_01034	0.0	-	-	-	L	-	-	-	DEAD DEAH box helicase
PDGPJJMA_01035	2.9e-254	-	-	-	S	-	-	-	Polyphosphate kinase 2 (PPK2)
PDGPJJMA_01036	3.8e-252	gluD	-	-	E	ko:K10007	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PDGPJJMA_01037	2.97e-144	gluC	-	-	E	ko:K10006	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PDGPJJMA_01038	1.45e-196	gluB	-	-	ET	ko:K10005	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 3 family
PDGPJJMA_01039	2.05e-180	gluA	-	-	E	ko:K10008	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding protein of ABC transporter for glutamate K02028
PDGPJJMA_01040	1.59e-120	-	-	-	S	-	-	-	Aminoacyl-tRNA editing domain
PDGPJJMA_01041	1.52e-83	-	-	-	K	-	-	-	helix_turn_helix, Lux Regulon
PDGPJJMA_01042	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
PDGPJJMA_01043	0.0	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Histidyl-tRNA synthetase
PDGPJJMA_01044	2.14e-301	-	-	-	S	-	-	-	Domain of Unknown Function (DUF349)
PDGPJJMA_01045	1.26e-75	-	2.7.13.3	-	T	ko:K07675,ko:K20263	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PDGPJJMA_01048	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	ATPase family associated with various cellular activities (AAA)
PDGPJJMA_01049	2.42e-237	uspA	-	-	T	-	-	-	Belongs to the universal stress protein A family
PDGPJJMA_01050	8.25e-249	-	-	-	S	-	-	-	Protein of unknown function (DUF3027)
PDGPJJMA_01051	1.23e-87	cspB	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
PDGPJJMA_01052	0.0	phoR	2.7.13.3	-	T	ko:K02484	-	ko00000,ko01000,ko01001,ko02022	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDGPJJMA_01053	1.23e-171	phoP	-	-	KT	ko:K02483	-	ko00000,ko02022	Response regulator receiver domain protein
PDGPJJMA_01054	7.36e-227	-	-	-	-	-	-	-	-
PDGPJJMA_01055	8.25e-53	-	-	-	S	-	-	-	Proteins of 100 residues with WXG
PDGPJJMA_01056	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PDGPJJMA_01057	3.01e-58	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
PDGPJJMA_01058	3.78e-101	-	-	-	S	-	-	-	LytR cell envelope-related transcriptional attenuator
PDGPJJMA_01059	1.29e-185	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PDGPJJMA_01060	7.07e-251	moxR	-	-	S	ko:K03924	-	ko00000,ko01000	ATPase family associated with various cellular activities (AAA)
PDGPJJMA_01061	1.18e-227	-	-	-	S	-	-	-	Protein of unknown function DUF58
PDGPJJMA_01062	2.08e-120	-	-	-	-	-	-	-	-
PDGPJJMA_01063	3.22e-246	-	-	-	S	ko:K07114	-	ko00000,ko02000	von Willebrand factor (vWF) type A domain
PDGPJJMA_01064	2.85e-198	-	-	-	S	ko:K07114	-	ko00000,ko02000	von Willebrand factor (vWF) type A domain
PDGPJJMA_01065	9.23e-117	-	-	-	-	-	-	-	-
PDGPJJMA_01067	0.0	-	-	-	S	-	-	-	PGAP1-like protein
PDGPJJMA_01068	0.0	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Adenylosuccinate lyase C-terminal
PDGPJJMA_01069	0.0	-	-	-	S	-	-	-	Lysylphosphatidylglycerol synthase TM region
PDGPJJMA_01070	4.7e-57	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Belongs to the bacterial histone-like protein family
PDGPJJMA_01071	0.0	pafA	6.3.1.19	-	O	ko:K13571	-	ko00000,ko00002,ko01000,ko03051	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
PDGPJJMA_01072	3.51e-27	pup	-	-	S	ko:K13570	-	ko00000,ko04121	Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation
PDGPJJMA_01073	1.98e-203	-	3.1.3.25	-	G	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	ko00000,ko00001,ko00002,ko01000	Inositol monophosphatase family
PDGPJJMA_01074	0.0	dop	3.5.1.119	-	S	ko:K20814	-	ko00000,ko01000,ko03051	Pup-ligase protein
PDGPJJMA_01075	0.0	arc	-	-	O	ko:K13527	ko03050,map03050	ko00000,ko00001,ko00002,ko03051	AAA ATPase forming ring-shaped complexes
PDGPJJMA_01077	1.56e-177	serB	3.1.3.3	-	E	ko:K01079	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko01009	haloacid dehalogenase-like hydrolase
PDGPJJMA_01078	2.6e-233	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PDGPJJMA_01079	3.86e-174	-	3.8.1.2	-	S	ko:K01560,ko:K07025	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
PDGPJJMA_01080	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PDGPJJMA_01081	7.86e-285	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PDGPJJMA_01082	9.87e-70	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PDGPJJMA_01083	0.0	ilvD	4.2.1.9	-	H	ko:K01687	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the IlvD Edd family
PDGPJJMA_01084	2.59e-212	-	-	-	S	-	-	-	Protein conserved in bacteria
PDGPJJMA_01086	1.23e-177	acnA	4.2.1.3	-	C	ko:K01681	ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
PDGPJJMA_01087	1.03e-141	-	-	-	-	-	-	-	-
PDGPJJMA_01088	6.12e-243	cbs	2.5.1.47, 4.2.1.22	-	E	ko:K01697,ko:K01738	ko00260,ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Pyridoxal-phosphate dependent enzyme
PDGPJJMA_01089	3.83e-282	metB	2.5.1.48	-	E	ko:K01739	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Cys/Met metabolism PLP-dependent enzyme
PDGPJJMA_01090	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
PDGPJJMA_01091	1.27e-118	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PDGPJJMA_01093	2.63e-121	cysE	-	-	J	-	-	-	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PDGPJJMA_01094	0.0	aap1	-	-	E	ko:K03294	-	ko00000	aromatic amino acid transport protein AroP K03293
PDGPJJMA_01095	0.0	alr	5.1.1.1	-	M	ko:K01775	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PDGPJJMA_01096	3.55e-313	dgt	3.1.5.1	-	F	ko:K01129	ko00230,map00230	ko00000,ko00001,ko01000	Phosphohydrolase-associated domain
PDGPJJMA_01097	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PDGPJJMA_01098	2.73e-206	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
PDGPJJMA_01099	1.88e-292	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
PDGPJJMA_01100	3.01e-59	-	-	-	S	ko:K06990	-	ko00000,ko04812	Memo-like protein
PDGPJJMA_01102	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PDGPJJMA_01103	2.38e-227	yogA	-	-	C	-	-	-	Zinc-binding dehydrogenase
PDGPJJMA_01104	5.14e-111	purE	5.4.99.18	-	F	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PDGPJJMA_01105	5.14e-291	purK	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PDGPJJMA_01106	2.88e-96	fur	-	-	P	ko:K03711	-	ko00000,ko03000	Belongs to the Fur family
PDGPJJMA_01107	7.37e-59	-	-	-	-	-	-	-	-
PDGPJJMA_01108	3.72e-197	-	-	-	S	-	-	-	TIGRFAM TIGR03943 family protein
PDGPJJMA_01109	1.76e-258	-	-	-	S	ko:K07089	-	ko00000	Predicted permease
PDGPJJMA_01110	6.34e-33	-	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Ribosomal L32p protein family
PDGPJJMA_01111	3.05e-21	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L36
PDGPJJMA_01112	7.57e-57	rpmE2	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
PDGPJJMA_01113	4.85e-65	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PDGPJJMA_01114	6.47e-64	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal L28 family
PDGPJJMA_01115	1.1e-179	-	-	-	S	-	-	-	cobalamin synthesis protein
PDGPJJMA_01116	1.85e-210	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Zinc-uptake complex component A periplasmic
PDGPJJMA_01117	0.0	lysX	-	-	S	-	-	-	Uncharacterised conserved protein (DUF2156)
PDGPJJMA_01118	0.0	-	-	-	S	-	-	-	Putative esterase
PDGPJJMA_01119	0.0	-	-	-	M	-	-	-	Psort location CytoplasmicMembrane, score 9.26
PDGPJJMA_01120	2.18e-306	purD	6.3.3.1, 6.3.4.13	-	F	ko:K01945,ko:K11788	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the GARS family
PDGPJJMA_01121	2.1e-245	purM	6.3.3.1	-	F	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoribosylformylglycinamidine cyclo-ligase
PDGPJJMA_01122	0.0	purF	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PDGPJJMA_01123	0.0	-	-	-	L	ko:K03502	-	ko00000,ko03400	DNA-damage repair protein (DNA polymerase IV) K00961
PDGPJJMA_01124	9.82e-45	-	-	-	-	-	-	-	-
PDGPJJMA_01125	1.64e-90	gloA	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PDGPJJMA_01126	1.84e-43	-	-	-	K	-	-	-	DNA-binding transcription factor activity
PDGPJJMA_01127	2.12e-186	nnrE	-	-	L	-	-	-	Uracil DNA glycosylase superfamily
PDGPJJMA_01128	3.49e-137	-	-	-	S	-	-	-	Protein of unknown function (DUF4230)
PDGPJJMA_01129	6.26e-146	-	-	-	-	-	-	-	-
PDGPJJMA_01130	0.0	purL	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	CobB/CobQ-like glutamine amidotransferase domain
PDGPJJMA_01131	2.05e-177	purC	6.3.2.6	-	F	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the SAICAR synthetase family
PDGPJJMA_01132	4.7e-299	purT	2.1.2.2	-	F	ko:K08289	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PDGPJJMA_01133	0.0	-	-	-	M	-	-	-	Parallel beta-helix repeats
PDGPJJMA_01134	1.8e-290	-	-	-	M	-	-	-	Glycosyl transferase 4-like domain
PDGPJJMA_01135	5.42e-255	ltaE	4.1.2.48	-	E	ko:K01620	ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	Beta-eliminating lyase
PDGPJJMA_01137	1.16e-80	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PDGPJJMA_01138	9.4e-105	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PDGPJJMA_01139	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PDGPJJMA_01140	5.83e-293	tuf	-	-	J	ko:K02358	-	ko00000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PDGPJJMA_01141	0.0	-	-	-	S	-	-	-	Esterase-like activity of phytase
PDGPJJMA_01142	7.54e-253	-	-	-	EGP	-	-	-	Transmembrane secretion effector
PDGPJJMA_01144	3.8e-135	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PDGPJJMA_01145	1.61e-147	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PDGPJJMA_01146	5.95e-305	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the CarA family
PDGPJJMA_01147	0.0	carB	6.3.5.5	-	EF	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
PDGPJJMA_01148	0.0	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
PDGPJJMA_01149	0.0	-	-	-	S	-	-	-	Protein of unknown function DUF262
PDGPJJMA_01150	6.09e-152	-	-	-	K	-	-	-	helix_turn_helix, Lux Regulon
PDGPJJMA_01151	0.0	-	-	-	T	-	-	-	Histidine kinase
PDGPJJMA_01152	2.53e-150	-	-	-	S	-	-	-	Domain of unknown function (DUF5067)
PDGPJJMA_01153	8.71e-176	-	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
PDGPJJMA_01154	9.47e-220	-	-	-	EG	-	-	-	EamA-like transporter family
PDGPJJMA_01155	4.06e-156	ywaC	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	Region found in RelA / SpoT proteins
PDGPJJMA_01156	0.0	miaB	2.8.4.3	-	H	ko:K06168	-	ko00000,ko01000,ko03016	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PDGPJJMA_01157	2.54e-235	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PDGPJJMA_01158	2.11e-175	fic	-	-	D	ko:K04095	-	ko00000,ko03036	Fic/DOC family
PDGPJJMA_01159	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	FtsK SpoIIIE family protein
PDGPJJMA_01160	9.72e-157	pgsA	2.7.8.41, 2.7.8.5	-	I	ko:K00995,ko:K08744	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PDGPJJMA_01161	1.14e-124	cinA	3.5.1.42	-	S	ko:K03743	ko00760,map00760	ko00000,ko00001,ko01000	Belongs to the CinA family
PDGPJJMA_01162	4.91e-104	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PDGPJJMA_01163	3.96e-53	-	-	-	S	-	-	-	Protein of unknown function (DUF3046)
PDGPJJMA_01164	7.71e-276	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PDGPJJMA_01165	1.97e-95	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Modulates RecA activity
PDGPJJMA_01167	3.68e-152	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PDGPJJMA_01168	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PDGPJJMA_01169	4.2e-242	trpD	2.4.2.18	-	F	ko:K00766	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PDGPJJMA_01170	4.56e-142	-	-	-	-	-	-	-	-
PDGPJJMA_01171	3.55e-172	plsC2	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Phosphate acyltransferases
PDGPJJMA_01172	0.0	pknL	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	PASTA
PDGPJJMA_01173	6.1e-255	idsA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13787	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PDGPJJMA_01174	9.8e-158	-	-	-	-	-	-	-	-
PDGPJJMA_01175	3.09e-252	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PDGPJJMA_01176	0.0	gyrB2	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	DNA topoisomerase (ATP-hydrolyzing)
PDGPJJMA_01177	0.0	aspA	4.3.1.1	-	E	ko:K01744	ko00250,ko01100,map00250,map01100	ko00000,ko00001,ko01000	Fumarase C C-terminus
PDGPJJMA_01178	3.09e-20	-	-	-	G	-	-	-	Major Facilitator Superfamily
PDGPJJMA_01179	1.93e-33	-	-	-	K	ko:K07727	-	ko00000,ko03000	Cro/C1-type HTH DNA-binding domain
PDGPJJMA_01180	0.0	lhr	-	-	L	ko:K03724	-	ko00000,ko01000,ko03400	DEAD DEAH box helicase
PDGPJJMA_01181	0.0	gyrA2	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	DNA topoisomerase (ATP-hydrolyzing)
PDGPJJMA_01182	1.1e-298	-	-	-	S	-	-	-	Type I phosphodiesterase / nucleotide pyrophosphatase
PDGPJJMA_01183	6.71e-241	-	-	-	S	-	-	-	Protein of unknown function (DUF3071)
PDGPJJMA_01184	2.45e-63	-	-	-	S	-	-	-	Domain of unknown function (DUF4193)
PDGPJJMA_01185	1.42e-110	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
PDGPJJMA_01186	0.0	relA	2.7.6.5, 3.1.7.2	-	KT	ko:K00951,ko:K01139	ko00230,map00230	ko00000,ko00001,ko01000,ko03009	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PDGPJJMA_01187	2.33e-39	-	-	-	-	-	-	-	-
PDGPJJMA_01189	3.6e-266	-	-	-	E	-	-	-	Belongs to the peptidase S1B family
PDGPJJMA_01190	1.78e-89	-	-	-	T	-	-	-	Toxic component of a toxin-antitoxin (TA) module
PDGPJJMA_01191	9.55e-66	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
PDGPJJMA_01192	3.42e-134	ppiA	5.2.1.8	-	G	ko:K03767,ko:K03768	ko01503,ko04217,map01503,map04217	ko00000,ko00001,ko01000,ko03110,ko04147	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PDGPJJMA_01193	2.76e-212	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PDGPJJMA_01194	3.12e-117	-	-	-	P	-	-	-	ABC-type metal ion transport system permease component
PDGPJJMA_01195	6.96e-286	-	-	-	S	-	-	-	Peptidase dimerisation domain
PDGPJJMA_01196	0.0	nadE	6.3.5.1	-	H	ko:K01950	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PDGPJJMA_01197	3.51e-52	-	-	-	-	-	-	-	-
PDGPJJMA_01198	0.0	pflB	2.3.1.54	-	C	ko:K00656	ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120	ko00000,ko00001,ko01000	Pyruvate formate lyase-like
PDGPJJMA_01199	5.19e-222	pflA	1.97.1.4	-	C	ko:K04069	-	ko00000,ko01000	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PDGPJJMA_01200	1.94e-146	-	-	-	S	-	-	-	Protein of unknown function (DUF3000)
PDGPJJMA_01201	6.8e-316	rnd	3.1.13.5	-	J	ko:K03684	-	ko00000,ko01000,ko03016	3'-5' exonuclease
PDGPJJMA_01202	9.36e-310	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PDGPJJMA_01203	0.0	-	-	-	P	ko:K03281	-	ko00000	Voltage gated chloride channel
PDGPJJMA_01205	4.05e-147	clpP1	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PDGPJJMA_01206	6.56e-164	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PDGPJJMA_01207	5.01e-311	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PDGPJJMA_01210	9e-299	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I II
PDGPJJMA_01212	2.77e-289	nhaA	-	-	P	ko:K03313	-	ko00000,ko02000	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
PDGPJJMA_01213	4.26e-222	fmt2	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the LOG family
PDGPJJMA_01214	1.75e-151	safC	-	-	S	-	-	-	O-methyltransferase
PDGPJJMA_01215	2.93e-234	sdhB	1.3.5.1, 1.3.5.4	-	C	ko:K00240	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	4Fe-4S dicluster domain
PDGPJJMA_01216	1.29e-92	yraN	-	-	L	ko:K07460	-	ko00000	Belongs to the UPF0102 family
PDGPJJMA_01217	0.0	comM	-	-	O	ko:K07391	-	ko00000	Magnesium chelatase, subunit ChlI C-terminal
PDGPJJMA_01218	0.0	dprA	-	-	LU	ko:K04096	-	ko00000	DNA recombination-mediator protein A
PDGPJJMA_01219	0.0	sdhA	1.3.5.1, 1.3.5.4, 1.4.3.16	-	C	ko:K00239,ko:K00278	ko00020,ko00190,ko00250,ko00650,ko00720,ko00760,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00250,map00650,map00720,map00760,map01100,map01110,map01120,map01130,map01200,map05134	ko00000,ko00001,ko00002,ko01000	Succinate dehydrogenase flavoprotein subunit
PDGPJJMA_01220	3.62e-212	pdxY	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
PDGPJJMA_01221	9.86e-202	-	-	-	S	-	-	-	Putative ABC-transporter type IV
PDGPJJMA_01222	0.0	-	2.5.1.49	-	E	ko:K01740	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	Aminotransferase class-V
PDGPJJMA_01223	2.96e-210	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PDGPJJMA_01224	0.0	-	-	-	MV	ko:K02004	-	ko00000,ko00002,ko02000	MacB-like periplasmic core domain
PDGPJJMA_01225	0.0	-	-	-	I	-	-	-	PAP2 superfamily
PDGPJJMA_01226	1.01e-170	-	-	-	K	-	-	-	helix_turn_helix, Lux Regulon
PDGPJJMA_01227	0.0	-	-	-	T	-	-	-	Histidine kinase
PDGPJJMA_01228	0.0	pip	3.4.11.5	-	S	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	alpha/beta hydrolase fold
PDGPJJMA_01229	7.09e-182	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PDGPJJMA_01230	9.87e-212	iaaA	3.4.19.5	-	E	ko:K13051	-	ko00000,ko01000,ko01002	Asparaginase
PDGPJJMA_01231	6.33e-188	-	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	NLPA lipoprotein
PDGPJJMA_01232	2.43e-240	acoA	1.2.4.1	-	C	ko:K00161,ko:K21416	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Dehydrogenase E1 component
PDGPJJMA_01233	1.63e-237	acoB	1.2.4.1, 1.2.4.4	-	C	ko:K00162,ko:K11381,ko:K21417	ko00010,ko00020,ko00280,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00280,map00620,map00640,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Pyruvate 2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit
PDGPJJMA_01234	1.64e-262	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PDGPJJMA_01235	1.14e-121	-	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PDGPJJMA_01236	3.12e-293	-	2.6.1.1, 2.6.1.2, 2.6.1.66, 2.6.1.83	-	E	ko:K00812,ko:K08969,ko:K10206,ko:K10907,ko:K14260,ko:K14261	ko00220,ko00250,ko00270,ko00290,ko00300,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00300,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase class I and II
PDGPJJMA_01237	2.06e-257	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PDGPJJMA_01238	1.44e-71	-	2.1.1.113, 2.1.1.72	-	L	ko:K00571,ko:K00590	-	ko00000,ko01000,ko02048	Belongs to the N(4) N(6)-methyltransferase family
PDGPJJMA_01239	3.61e-243	mod	2.1.1.72	-	L	ko:K07316	-	ko00000,ko01000,ko02048	PFAM DNA methylase
PDGPJJMA_01240	3.42e-298	-	3.1.21.5	-	L	ko:K01156	-	ko00000,ko01000,ko02048	Type III restriction enzyme res subunit
PDGPJJMA_01241	1.34e-75	-	-	-	J	-	-	-	tRNA cytidylyltransferase activity
PDGPJJMA_01242	5.06e-145	vex	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PDGPJJMA_01243	6.63e-52	-	-	-	E	-	-	-	Branched-chain amino acid transport protein (AzlD)
PDGPJJMA_01244	1.8e-249	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
PDGPJJMA_01245	2.34e-124	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	low molecular weight
PDGPJJMA_01246	9.06e-164	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	dihydrofolate reductase
PDGPJJMA_01247	4.99e-223	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PDGPJJMA_01248	4.35e-94	-	-	-	O	-	-	-	OsmC-like protein
PDGPJJMA_01249	1.31e-244	-	-	-	T	-	-	-	Universal stress protein family
PDGPJJMA_01250	9.72e-153	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
PDGPJJMA_01251	8.65e-231	-	-	-	S	-	-	-	CHAP domain
PDGPJJMA_01252	1.05e-274	serC	2.6.1.52	-	E	ko:K00831	ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PDGPJJMA_01253	4.6e-53	-	-	-	-	-	-	-	-
PDGPJJMA_01254	6.51e-288	senX3	2.7.13.3	-	T	ko:K07768	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDGPJJMA_01255	9.33e-153	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
PDGPJJMA_01257	9.96e-189	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PDGPJJMA_01258	2.37e-223	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the MenA family. Type 1 subfamily
PDGPJJMA_01259	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
PDGPJJMA_01261	7.45e-278	-	-	-	EGP	ko:K08156,ko:K19577	-	ko00000,ko02000	Major Facilitator Superfamily
PDGPJJMA_01262	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4037)
PDGPJJMA_01263	9.55e-146	-	-	-	S	-	-	-	Protein of unknown function (DUF4125)
PDGPJJMA_01264	1.6e-203	-	-	-	-	-	-	-	-
PDGPJJMA_01265	0.0	pspC	-	-	KT	-	-	-	PspC domain
PDGPJJMA_01266	0.0	tcsS3	-	-	KT	-	-	-	PspC domain
PDGPJJMA_01267	9.73e-162	tcsR3	-	-	K	-	-	-	helix_turn_helix, Lux Regulon
PDGPJJMA_01268	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PDGPJJMA_01270	5.83e-181	pgl	3.1.1.31	-	G	ko:K01057	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
PDGPJJMA_01271	7.54e-240	opcA	-	-	G	-	-	-	Glucose-6-phosphate dehydrogenase subunit
PDGPJJMA_01272	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PDGPJJMA_01273	4.52e-123	-	-	-	-	-	-	-	-
PDGPJJMA_01275	0.0	-	3.2.1.50	-	G	ko:K01205	ko00531,ko01100,ko04142,map00531,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko04147	Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain
PDGPJJMA_01277	1.26e-304	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PDGPJJMA_01278	0.0	-	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	5'-nucleotidase, C-terminal domain
PDGPJJMA_01279	2.27e-270	-	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
PDGPJJMA_01280	5.06e-198	arbG	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
PDGPJJMA_01281	0.0	ptsG	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	pts system, glucose-specific IIABC component
PDGPJJMA_01282	4.73e-05	-	-	-	O	ko:K18546	-	ko00000,ko01000,ko01002	Peptidase s1 and s6 chymotrypsin hap
PDGPJJMA_01283	4.43e-57	-	-	-	M	-	-	-	Spy0128-like isopeptide containing domain
PDGPJJMA_01285	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
PDGPJJMA_01286	0.0	merA	1.16.1.1	-	C	ko:K00520,ko:K21739	-	ko00000,ko01000	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PDGPJJMA_01287	0.0	-	3.2.1.35	-	G	ko:K01197	ko00531,ko01100,map00531,map01100	ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042	beta-N-acetylglucosaminidase
PDGPJJMA_01288	4.34e-261	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDGPJJMA_01289	1.28e-162	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PDGPJJMA_01290	5.18e-07	-	-	-	S	-	-	-	Mitochondrial domain of unknown function (DUF1713)
PDGPJJMA_01291	6.9e-142	-	-	-	-	-	-	-	-
PDGPJJMA_01292	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PDGPJJMA_01293	1.78e-304	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	riboflavin kinase
PDGPJJMA_01294	1.58e-299	truB	5.4.99.25	-	J	ko:K03177	-	ko00000,ko01000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PDGPJJMA_01295	5.87e-116	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PDGPJJMA_01296	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PDGPJJMA_01297	4.71e-241	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
PDGPJJMA_01298	6.58e-227	-	-	-	-	-	-	-	-
PDGPJJMA_01299	2.03e-185	tnp3503b	-	-	L	-	-	-	Transposase and inactivated derivatives
PDGPJJMA_01301	5.51e-199	-	-	-	E	-	-	-	Transglutaminase/protease-like homologues
PDGPJJMA_01302	0.0	gcs2	-	-	S	ko:K06048	-	ko00000,ko01000	A circularly permuted ATPgrasp
PDGPJJMA_01303	4.08e-221	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PDGPJJMA_01304	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	hydrolase family 20, catalytic
PDGPJJMA_01305	3.77e-95	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
PDGPJJMA_01306	1.4e-236	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDGPJJMA_01307	7.34e-86	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PDGPJJMA_01308	6.96e-83	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PDGPJJMA_01309	1.03e-20	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
PDGPJJMA_01310	6.91e-45	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PDGPJJMA_01311	3.93e-128	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PDGPJJMA_01312	0.0	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PDGPJJMA_01313	1.51e-94	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	binds to the 23S rRNA
PDGPJJMA_01314	1.46e-34	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30p/L7e
PDGPJJMA_01315	5.71e-140	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PDGPJJMA_01316	1.53e-76	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PDGPJJMA_01317	2.69e-122	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PDGPJJMA_01318	9.65e-91	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PDGPJJMA_01319	7.06e-40	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PDGPJJMA_01320	1.6e-133	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PDGPJJMA_01321	9.32e-70	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PDGPJJMA_01322	7.32e-79	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PDGPJJMA_01323	3.83e-56	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PDGPJJMA_01324	6.77e-51	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
PDGPJJMA_01325	2.71e-98	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PDGPJJMA_01326	2.73e-161	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PDGPJJMA_01327	2.21e-74	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PDGPJJMA_01328	1.4e-62	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PDGPJJMA_01329	1.15e-196	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PDGPJJMA_01330	2.54e-61	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PDGPJJMA_01331	1.34e-154	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
PDGPJJMA_01332	6.65e-153	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PDGPJJMA_01333	5.42e-67	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
PDGPJJMA_01334	1.07e-18	-	-	-	S	-	-	-	YwiC-like protein
PDGPJJMA_01335	7.44e-108	-	-	-	S	-	-	-	YwiC-like protein
PDGPJJMA_01337	3.91e-213	budA	4.1.1.5	-	H	ko:K01575	ko00650,ko00660,map00650,map00660	ko00000,ko00001,ko01000	Alpha-acetolactate decarboxylase
PDGPJJMA_01338	0.0	adhE	1.1.1.1, 1.2.1.10, 1.2.1.81	-	C	ko:K04072,ko:K15515	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
PDGPJJMA_01339	1.57e-300	-	-	-	GK	-	-	-	transcriptional repressor of nag (N-acetylglucosamine) operon K02565
PDGPJJMA_01340	0.0	glgX	3.2.1.196, 3.2.1.68	CBM48,GH13	G	ko:K01214,ko:K02438	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the glycosyl hydrolase 13 family
PDGPJJMA_01341	1.71e-99	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
PDGPJJMA_01342	2.64e-103	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PDGPJJMA_01343	0.0	malQ	2.4.1.25	GH77	G	ko:K00705	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	4-alpha-glucanotransferase
PDGPJJMA_01344	1.25e-156	-	-	-	-	-	-	-	-
PDGPJJMA_01345	4e-147	yigZ	-	-	S	-	-	-	Uncharacterized protein family UPF0029
PDGPJJMA_01346	0.0	-	-	-	M	ko:K07282	-	ko00000	Bacterial capsule synthesis protein PGA_cap
PDGPJJMA_01348	1.89e-306	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PDGPJJMA_01349	4.92e-286	dapC	-	-	E	-	-	-	Aminotransferase class I and II
PDGPJJMA_01350	3.55e-81	fdxA	-	-	C	ko:K05524	-	ko00000	4Fe-4S binding domain
PDGPJJMA_01351	3.69e-278	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
PDGPJJMA_01352	2.71e-35	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L33
PDGPJJMA_01356	1.3e-56	-	-	-	KLT	-	-	-	Associated with various cellular activities
PDGPJJMA_01357	7.89e-167	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
PDGPJJMA_01358	3.49e-63	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PDGPJJMA_01359	2.33e-265	-	-	-	-	-	-	-	-
PDGPJJMA_01360	6.96e-191	rimJ	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
PDGPJJMA_01361	5.69e-154	ygfA	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	5-formyltetrahydrofolate cyclo-ligase family
PDGPJJMA_01362	1.88e-51	-	-	-	S	-	-	-	Putative regulatory protein
PDGPJJMA_01363	2.1e-141	-	-	-	NO	-	-	-	SAF
PDGPJJMA_01364	2.87e-56	-	-	-	-	-	-	-	-
PDGPJJMA_01365	0.0	-	-	-	L	-	-	-	Superfamily I DNA and RNA helicases and helicase subunits
PDGPJJMA_01366	0.0	-	-	-	T	-	-	-	Forkhead associated domain
PDGPJJMA_01368	5.13e-61	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PDGPJJMA_01369	5.06e-115	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PDGPJJMA_01370	5.94e-234	xynB2	1.1.1.169	-	E	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	lipolytic protein G-D-S-L family
PDGPJJMA_01371	0.0	-	-	-	G	-	-	-	BNR repeat-like domain
PDGPJJMA_01373	5.92e-313	-	-	-	S	ko:K06901	-	ko00000,ko02000	Permease family
PDGPJJMA_01375	7.39e-219	-	-	-	S	-	-	-	Protein conserved in bacteria
PDGPJJMA_01376	1.29e-189	pstB	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PDGPJJMA_01377	6.61e-234	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease
PDGPJJMA_01378	8.51e-219	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
PDGPJJMA_01379	6.94e-262	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import
PDGPJJMA_01380	5.44e-165	regX3	-	-	KT	ko:K07776	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C terminal
PDGPJJMA_01381	1.28e-311	phoR	2.7.13.3	-	T	ko:K07636,ko:K07768	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	His Kinase A (phosphoacceptor) domain
PDGPJJMA_01382	2.2e-160	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PDGPJJMA_01383	3.6e-305	aroG	2.5.1.54	-	E	ko:K01626	ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024	ko00000,ko00001,ko00002,ko01000	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PDGPJJMA_01384	1.71e-138	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
PDGPJJMA_01385	6.09e-310	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PDGPJJMA_01386	1.14e-276	aroG	2.5.1.54	-	E	ko:K01626	ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024	ko00000,ko00001,ko00002,ko01000	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PDGPJJMA_01387	1.97e-231	-	-	-	L	-	-	-	Excalibur calcium-binding domain
PDGPJJMA_01388	0.0	pepC2	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
PDGPJJMA_01389	3.81e-124	-	-	-	D	-	-	-	nuclear chromosome segregation
PDGPJJMA_01390	2.23e-164	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PDGPJJMA_01391	9.04e-186	ispD	1.1.1.405, 2.7.7.40, 2.7.7.60	-	I	ko:K00991,ko:K21681	ko00040,ko00900,ko01100,ko01110,ko01130,map00040,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
PDGPJJMA_01392	2.25e-240	yfiH	-	-	Q	ko:K05810	-	ko00000,ko01000	Multi-copper polyphenol oxidoreductase laccase
PDGPJJMA_01393	0.0	-	-	-	O	ko:K08303	ko05120,map05120	ko00000,ko00001,ko01000,ko01002	Peptidase family U32 C-terminal domain
PDGPJJMA_01394	5.16e-65	-	-	-	L	-	-	-	Transposase and inactivated derivatives IS30 family
PDGPJJMA_01395	6.85e-214	-	-	-	C	-	-	-	Oxidoreductase, aldo keto reductase family protein
PDGPJJMA_01396	2.97e-54	nrdH	-	-	O	ko:K06191	-	ko00000	Glutaredoxin
PDGPJJMA_01397	3.47e-128	nrdI	-	-	F	ko:K03647	-	ko00000	Probably involved in ribonucleotide reductase function
PDGPJJMA_01398	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDGPJJMA_01399	3.61e-71	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDGPJJMA_01400	2.28e-95	megL	4.4.1.11	-	E	ko:K01761	ko00270,ko00450,map00270,map00450	ko00000,ko00001,ko01000	Cys/Met metabolism PLP-dependent enzyme
PDGPJJMA_01401	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2207)
PDGPJJMA_01402	2.43e-121	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
PDGPJJMA_01403	9.98e-147	xylR	-	-	K	ko:K02529	-	ko00000,ko03000	purine nucleotide biosynthetic process
PDGPJJMA_01404	0.0	pnp	2.7.7.8	-	J	ko:K00962	ko00230,ko00240,ko03018,map00230,map00240,map03018	ko00000,ko00001,ko00002,ko01000,ko03016,ko03019	Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
PDGPJJMA_01405	8.32e-56	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PDGPJJMA_01406	1.43e-151	-	-	-	-	-	-	-	-
PDGPJJMA_01407	0.0	-	3.2.1.35	-	G	ko:K01197	ko00531,ko01100,map00531,map01100	ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042	beta-N-acetylglucosaminidase
PDGPJJMA_01409	4.39e-209	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Biotin/lipoate A/B protein ligase family
PDGPJJMA_01410	5.82e-130	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PDGPJJMA_01411	0.0	fas	-	-	I	ko:K11533	ko00061,ko01100,ko01212,ko04931,map00061,map01100,map01212,map04931	ko00000,ko00001,ko00002,ko01000,ko01004	Beta-ketoacyl synthase, C-terminal domain
PDGPJJMA_01412	0.0	pccB	-	-	I	-	-	-	Carboxyl transferase domain
PDGPJJMA_01413	0.0	accC	6.3.4.14, 6.4.1.2, 6.4.1.3	-	I	ko:K11263	ko00061,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase L chain, ATP binding domain protein
PDGPJJMA_01414	2.14e-119	bioY	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	BioY family
PDGPJJMA_01415	3.74e-193	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Biotin/lipoate A/B protein ligase family
PDGPJJMA_01416	0.0	-	-	-	-	-	-	-	-
PDGPJJMA_01417	8.27e-187	-	-	-	QT	-	-	-	PucR C-terminal helix-turn-helix domain
PDGPJJMA_01418	1.83e-167	nucS	-	-	L	ko:K07503	-	ko00000,ko01000	Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
PDGPJJMA_01419	1.39e-66	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
PDGPJJMA_01420	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PDGPJJMA_01421	2.73e-213	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PDGPJJMA_01422	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PDGPJJMA_01423	2.81e-192	atpH	-	-	C	ko:K02109,ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDGPJJMA_01424	7.5e-98	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PDGPJJMA_01425	1.21e-40	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDGPJJMA_01427	1.44e-187	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
PDGPJJMA_01428	8.42e-265	metAA	2.3.1.46	-	E	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PDGPJJMA_01430	2.17e-47	-	-	-	-	-	-	-	-
PDGPJJMA_01431	0.0	-	-	-	K	-	-	-	RNA polymerase II activating transcription factor binding
PDGPJJMA_01432	0.0	glgE	2.4.99.16	GH13	G	ko:K16147	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
PDGPJJMA_01433	1.13e-118	ppa	3.6.1.1	-	C	ko:K01507	ko00190,map00190	ko00000,ko00001,ko01000	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
PDGPJJMA_01435	2.85e-134	mntP	-	-	P	-	-	-	Probably functions as a manganese efflux pump
PDGPJJMA_01436	5.6e-170	-	-	-	-	-	-	-	-
PDGPJJMA_01437	5.57e-175	glnR	-	-	KT	-	-	-	Transcriptional regulatory protein, C terminal
PDGPJJMA_01438	2.07e-162	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PDGPJJMA_01439	0.0	-	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
PDGPJJMA_01440	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PDGPJJMA_01441	0.0	-	-	-	S	-	-	-	domain protein
PDGPJJMA_01442	9.37e-96	tyrA	5.4.99.5	-	E	ko:K04092	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Chorismate mutase type II
PDGPJJMA_01443	8.96e-117	lrp_3	-	-	K	ko:K03719	-	ko00000,ko03000,ko03036	helix_turn_helix ASNC type
PDGPJJMA_01444	2.06e-298	-	2.6.1.1, 2.6.1.2, 2.6.1.66	-	E	ko:K00812,ko:K08969,ko:K10907,ko:K14260	ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase class I and II
PDGPJJMA_01445	0.0	rho	-	-	K	ko:K03628	ko03018,map03018	ko00000,ko00001,ko03019,ko03021	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PDGPJJMA_01446	0.0	-	-	-	H	-	-	-	Flavin containing amine oxidoreductase
PDGPJJMA_01448	6.51e-69	-	-	-	S	-	-	-	Protein of unknown function (DUF2469)
PDGPJJMA_01449	1.96e-251	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PDGPJJMA_01450	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PDGPJJMA_01451	0.0	gatA	6.3.5.6, 6.3.5.7	-	F	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PDGPJJMA_01452	3.33e-64	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PDGPJJMA_01454	3.36e-80	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
PDGPJJMA_01455	1.22e-77	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
PDGPJJMA_01456	9.21e-212	trmH	2.1.1.34	-	J	ko:K00556	-	ko00000,ko01000,ko03016	RNA methyltransferase TrmH family
PDGPJJMA_01457	4.27e-165	pyrE1	-	-	F	-	-	-	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PDGPJJMA_01458	1.45e-297	rmuC	-	-	S	ko:K09760	-	ko00000	RmuC family
PDGPJJMA_01459	6.68e-57	csoR	-	-	S	ko:K21600	-	ko00000,ko03000	Metal-sensitive transcriptional repressor
PDGPJJMA_01460	0.0	-	3.6.3.4, 3.6.3.54	-	P	ko:K01533,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	E1-E2 ATPase
PDGPJJMA_01461	0.0	-	-	-	S	ko:K03688	-	ko00000	ABC1 family
PDGPJJMA_01462	3.15e-44	-	-	-	S	-	-	-	granule-associated protein
PDGPJJMA_01463	1.02e-181	cobQ2	-	-	S	ko:K07009	-	ko00000	CobB/CobQ-like glutamine amidotransferase domain
PDGPJJMA_01464	0.0	murE	-	-	M	-	-	-	Domain of unknown function (DUF1727)
PDGPJJMA_01465	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
PDGPJJMA_01466	0.0	dinF	-	-	V	-	-	-	MatE
PDGPJJMA_01467	0.0	glnD	2.7.7.59	-	O	ko:K00990	ko02020,map02020	ko00000,ko00001,ko01000	Nucleotidyltransferase domain
PDGPJJMA_01468	2.56e-72	glnB	-	-	K	ko:K04751	ko02020,map02020	ko00000,ko00001	Nitrogen regulatory protein P-II
PDGPJJMA_01469	1.72e-304	amt	-	-	U	ko:K03320	-	ko00000,ko02000	Ammonium Transporter Family
PDGPJJMA_01470	2.48e-276	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PDGPJJMA_01472	1.66e-172	icaR	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PDGPJJMA_01473	1.96e-254	-	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	Glycosyltransferase like family 2
PDGPJJMA_01474	0.0	-	-	-	S	-	-	-	Glycosyl hydrolases related to GH101 family, GH129
PDGPJJMA_01475	0.0	-	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Peptidase family C69
PDGPJJMA_01476	3.23e-15	-	-	-	S	ko:K16926	-	ko00000,ko00002,ko02000	Hypothetical bacterial integral membrane protein (Trep_Strep)
PDGPJJMA_01477	4.82e-114	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
PDGPJJMA_01478	7.12e-109	-	-	-	-	-	-	-	-
PDGPJJMA_01479	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter transmembrane region
PDGPJJMA_01480	0.0	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter, ATP-binding protein
PDGPJJMA_01481	2.29e-106	-	-	-	K	-	-	-	Winged helix DNA-binding domain
PDGPJJMA_01482	0.0	-	-	-	M	-	-	-	LPXTG cell wall anchor motif
PDGPJJMA_01483	8.28e-238	-	-	-	M	ko:K20276	ko02024,map02024	ko00000,ko00001	chlorophyll binding
PDGPJJMA_01484	9.22e-270	-	-	-	M	ko:K20276	ko02024,map02024	ko00000,ko00001	chlorophyll binding
PDGPJJMA_01485	7.04e-228	-	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
PDGPJJMA_01488	2.35e-207	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PDGPJJMA_01489	1.13e-307	-	-	-	S	-	-	-	Putative ABC-transporter type IV
PDGPJJMA_01490	2.24e-103	-	-	-	-	-	-	-	-
PDGPJJMA_01491	1.89e-47	-	-	-	Q	-	-	-	phosphatase activity
PDGPJJMA_01492	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Glycosyl hydrolase family 1
PDGPJJMA_01493	1.29e-66	-	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIA subunit
PDGPJJMA_01494	1.2e-64	-	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
PDGPJJMA_01495	0.0	-	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDGPJJMA_01496	1.13e-86	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
PDGPJJMA_01497	1.5e-167	-	-	-	K	ko:K03489,ko:K03710	-	ko00000,ko03000	UTRA
PDGPJJMA_01498	8.08e-103	-	-	-	S	-	-	-	FMN_bind
PDGPJJMA_01499	7.76e-191	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PDGPJJMA_01500	3.5e-276	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PDGPJJMA_01501	1.87e-288	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
PDGPJJMA_01502	1.76e-295	-	-	-	S	-	-	-	Predicted membrane protein (DUF2318)
PDGPJJMA_01503	2.37e-146	-	-	-	P	ko:K07230	-	ko00000,ko02000	Fe2+ transport protein
PDGPJJMA_01504	0.0	-	-	-	P	ko:K07243	-	ko00000,ko02000	Iron permease FTR1 family
PDGPJJMA_01505	8.33e-31	-	-	-	G	-	-	-	MFS/sugar transport protein
PDGPJJMA_01506	1.23e-257	-	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PDGPJJMA_01507	5.58e-48	-	-	-	S	-	-	-	Fic/DOC family
PDGPJJMA_01508	1.31e-60	-	-	-	S	-	-	-	Fic/DOC family
PDGPJJMA_01509	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PDGPJJMA_01510	1.47e-50	hpr	-	-	G	ko:K11189	-	ko00000,ko02000	PTS HPr component phosphorylation site
PDGPJJMA_01513	8.16e-184	-	-	-	S	-	-	-	Domain of unknown function (DUF4194)
PDGPJJMA_01514	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.87
PDGPJJMA_01515	2.96e-207	nfo	3.1.21.2	-	L	ko:K01151	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PDGPJJMA_01516	9.61e-84	-	-	-	K	-	-	-	Protein of unknown function, DUF488
PDGPJJMA_01517	1.54e-147	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PDGPJJMA_01518	6.56e-118	-	-	-	K	-	-	-	FR47-like protein
PDGPJJMA_01519	8.62e-130	-	-	-	F	-	-	-	Hydrolase of X-linked nucleoside diphosphate N terminal
PDGPJJMA_01520	7.27e-28	-	-	-	S	-	-	-	Carbon-nitrogen hydrolase
PDGPJJMA_01522	9.85e-236	-	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
PDGPJJMA_01523	6.92e-171	-	-	-	S	-	-	-	SOS response associated peptidase (SRAP)
PDGPJJMA_01524	1.62e-165	-	-	-	-	-	-	-	-
PDGPJJMA_01525	1.6e-104	gloA	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PDGPJJMA_01526	6.84e-227	-	-	-	M	-	-	-	heme binding
PDGPJJMA_01527	6.9e-152	-	-	-	EGP	ko:K08217	-	br01600,ko00000,ko01504,ko02000	Transmembrane secretion effector
PDGPJJMA_01529	5.83e-196	-	-	-	-	-	-	-	-
PDGPJJMA_01530	1.1e-13	-	-	-	CE	ko:K03294	-	ko00000	Amino acid permease
PDGPJJMA_01531	7.98e-115	-	-	-	S	-	-	-	Putative ABC-transporter type IV
PDGPJJMA_01532	5.99e-143	-	1.6.5.2	-	S	ko:K00355	ko00130,ko01110,ko05200,ko05225,ko05418,map00130,map01110,map05200,map05225,map05418	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
PDGPJJMA_01533	1.12e-246	-	-	-	V	-	-	-	VanZ like family
PDGPJJMA_01534	4.46e-188	-	-	-	KT	-	-	-	RESPONSE REGULATOR receiver
PDGPJJMA_01535	1.36e-91	pdxH	-	-	S	ko:K07006	-	ko00000	Pfam:Pyridox_oxidase
PDGPJJMA_01536	9.23e-190	-	-	-	S	ko:K09974	-	ko00000	Domain of unknown function (DUF1287)
PDGPJJMA_01537	1.99e-170	-	-	-	C	-	-	-	Putative TM nitroreductase
PDGPJJMA_01538	1.92e-161	-	-	-	-	-	-	-	-
PDGPJJMA_01540	0.0	treS_1	-	-	G	-	-	-	Alpha amylase, catalytic domain
PDGPJJMA_01541	1.26e-100	-	-	-	S	-	-	-	Bacterial PH domain
PDGPJJMA_01542	1.65e-177	gpmB	3.1.3.85, 5.4.2.11	-	G	ko:K01834,ko:K22306	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Phosphoglycerate mutase family
PDGPJJMA_01543	1.05e-89	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PDGPJJMA_01544	0.0	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PDGPJJMA_01546	6.24e-244	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PDGPJJMA_01547	1.57e-184	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PDGPJJMA_01548	2.19e-121	-	-	-	-	-	-	-	-
PDGPJJMA_01549	1.45e-299	proA	1.2.1.41	-	E	ko:K00147	ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PDGPJJMA_01550	0.0	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase N terminus
PDGPJJMA_01551	3.78e-157	-	-	-	S	-	-	-	ABC-2 family transporter protein
PDGPJJMA_01552	3.76e-162	-	-	-	S	-	-	-	ABC-2 family transporter protein
PDGPJJMA_01553	2.21e-227	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PDGPJJMA_01554	6.98e-78	-	-	-	K	ko:K07979	-	ko00000,ko03000	helix_turn_helix gluconate operon transcriptional repressor
PDGPJJMA_01555	1.24e-158	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
PDGPJJMA_01556	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
PDGPJJMA_01557	3.15e-235	nadK	2.7.1.23	-	H	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PDGPJJMA_01558	0.0	trkH	-	-	P	ko:K03498	-	ko00000,ko02000	Cation transport protein
PDGPJJMA_01559	5.24e-150	trkA	-	-	P	ko:K03499	-	ko00000,ko02000	TrkA-N domain
PDGPJJMA_01560	2.64e-142	-	-	-	-	-	-	-	-
PDGPJJMA_01561	9.34e-175	tlyA	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
PDGPJJMA_01563	1.53e-242	-	-	-	G	-	-	-	Haloacid dehalogenase-like hydrolase
PDGPJJMA_01564	2.15e-235	-	-	-	L	-	-	-	Tetratricopeptide repeat
PDGPJJMA_01566	9.38e-256	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PDGPJJMA_01567	1.22e-271	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
PDGPJJMA_01568	2.08e-158	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PDGPJJMA_01569	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PDGPJJMA_01570	8.86e-249	-	-	-	I	-	-	-	PAP2 superfamily
PDGPJJMA_01571	0.0	-	-	-	M	-	-	-	PA domain
PDGPJJMA_01572	3.72e-162	-	-	-	S	ko:K11068	-	ko00000,ko02042	Haemolysin-III related
PDGPJJMA_01573	1.27e-295	glf	5.4.99.9	-	M	ko:K01854	ko00052,ko00520,map00052,map00520	ko00000,ko00001,ko01000	UDP-galactopyranose mutase
PDGPJJMA_01574	0.0	pbp5	-	-	M	-	-	-	Transglycosylase
PDGPJJMA_01575	0.0	leuA	2.3.3.13	-	E	ko:K01649	ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PDGPJJMA_01576	0.0	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
PDGPJJMA_01577	1.08e-18	-	2.7.11.1	-	S	ko:K12132	-	ko00000,ko01000,ko01001	PASTA domain
PDGPJJMA_01578	0.0	-	2.7.11.1	-	S	ko:K12132	-	ko00000,ko01000,ko01001	PASTA domain
PDGPJJMA_01579	1.77e-148	-	-	-	-	-	-	-	-
PDGPJJMA_01580	6.5e-270	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PDGPJJMA_01582	1.42e-126	ask	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	ACT domain
PDGPJJMA_01583	2.29e-176	ask	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Amino acid kinase family
PDGPJJMA_01584	1.21e-142	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PDGPJJMA_01585	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III subunit gamma tau
PDGPJJMA_01586	3.79e-273	-	2.7.1.107	-	I	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Diacylglycerol kinase catalytic domain protein
PDGPJJMA_01587	3.62e-73	-	-	-	S	-	-	-	TIGRFAM helicase secretion neighborhood TadE-like protein
PDGPJJMA_01588	1.13e-54	-	-	-	S	-	-	-	Protein of unknown function (DUF4244)
PDGPJJMA_01589	1.3e-20	-	-	-	NU	-	-	-	Type II secretion system (T2SS), protein F
PDGPJJMA_01591	6.16e-156	-	-	-	U	ko:K12510	-	ko00000,ko02044	Type ii secretion system
PDGPJJMA_01592	6.74e-244	cpaF	-	-	U	ko:K02283	-	ko00000,ko02035,ko02044	Type II IV secretion system protein
PDGPJJMA_01593	1.34e-196	-	-	-	D	-	-	-	bacterial-type flagellum organization
PDGPJJMA_01595	0.0	ppk	2.7.4.1	-	P	ko:K00937	ko00190,ko03018,map00190,map03018	ko00000,ko00001,ko01000,ko03019	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PDGPJJMA_01596	5.71e-257	mutT	3.6.1.55	-	LT	ko:K03574	-	ko00000,ko01000,ko03400	Phosphoglycerate mutase family
PDGPJJMA_01597	7.83e-132	-	-	-	-	-	-	-	-
PDGPJJMA_01599	3.15e-75	ureD	-	-	O	ko:K03190	-	ko00000	Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
PDGPJJMA_01600	1.24e-265	-	-	-	S	-	-	-	Glycosyltransferase, group 2 family protein
PDGPJJMA_01601	0.0	-	-	-	-	-	-	-	-
PDGPJJMA_01602	0.000146	-	-	-	-	-	-	-	-
PDGPJJMA_01603	2.41e-37	thiS	-	-	H	ko:K03154	ko04122,map04122	ko00000,ko00001	ThiS family
PDGPJJMA_01604	1.93e-211	thiG	2.8.1.10	-	H	ko:K03149	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
PDGPJJMA_01605	0.0	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.87
PDGPJJMA_01606	2.17e-51	-	-	GT2	M	ko:K20534	-	ko00000,ko01000,ko01005,ko02000	Glycosyl transferase family 2
PDGPJJMA_01607	0.0	-	-	-	H	-	-	-	Protein of unknown function (DUF4012)
PDGPJJMA_01608	0.0	-	-	-	V	-	-	-	ABC transporter permease
PDGPJJMA_01609	9.05e-260	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
PDGPJJMA_01610	8.06e-177	-	-	-	T	ko:K06950	-	ko00000	HD domain
PDGPJJMA_01611	8.21e-212	-	-	-	S	-	-	-	Glutamine amidotransferase domain
PDGPJJMA_01613	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
PDGPJJMA_01614	5.49e-237	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	TatD related DNase
PDGPJJMA_01615	0.0	-	-	-	G	ko:K16210	-	ko00000,ko02000	MFS/sugar transport protein
PDGPJJMA_01617	3.89e-113	-	-	-	K	-	-	-	Transcriptional regulator
PDGPJJMA_01618	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PDGPJJMA_01619	7.68e-170	-	-	-	-	-	-	-	-
PDGPJJMA_01620	1.6e-83	-	-	-	-	-	-	-	-
PDGPJJMA_01621	7.65e-220	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PDGPJJMA_01622	1.82e-162	dedA1	-	-	S	ko:K03975	-	ko00000	SNARE associated Golgi protein
PDGPJJMA_01624	1.42e-172	-	-	-	S	-	-	-	HAD hydrolase, family IA, variant 3
PDGPJJMA_01625	0.0	-	3.2.1.18	GH33	G	ko:K01186	ko00511,ko00600,ko04142,map00511,map00600,map04142	ko00000,ko00001,ko01000,ko02042	BNR Asp-box repeat
PDGPJJMA_01626	0.0	-	3.2.1.18	GH33	G	ko:K01186	ko00511,ko00600,ko04142,map00511,map00600,map04142	ko00000,ko00001,ko01000,ko02042	BNR repeat-like domain
PDGPJJMA_01627	6.42e-112	hspR	-	-	K	ko:K13640	-	ko00000,ko03000	transcriptional regulator, MerR family
PDGPJJMA_01628	2.72e-236	dnaJ	-	-	O	ko:K03686,ko:K05516	-	ko00000,ko03029,ko03036,ko03110	DnaJ molecular chaperone homology domain
PDGPJJMA_01629	1.04e-88	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PDGPJJMA_01630	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
PDGPJJMA_01631	0.0	strK	3.1.3.1, 3.1.3.39	-	P	ko:K01077,ko:K04342	ko00521,ko00730,ko00790,ko01100,ko01130,ko02020,map00521,map00730,map00790,map01100,map01130,map02020	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	Alkaline phosphatase homologues
PDGPJJMA_01632	5.31e-241	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
PDGPJJMA_01634	6.15e-06	-	-	-	M	-	-	-	cell wall anchor domain protein
PDGPJJMA_01635	8.43e-171	gpm2	3.1.3.73	-	G	ko:K02226	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Phosphoglycerate mutase family
PDGPJJMA_01636	9.49e-90	-	-	-	S	-	-	-	Protein of unknown function (DUF4235)
PDGPJJMA_01637	8.76e-180	nfrA	-	-	C	-	-	-	Nitroreductase family
PDGPJJMA_01638	2.45e-61	-	-	-	-	-	-	-	-
PDGPJJMA_01640	4.37e-289	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
PDGPJJMA_01641	2e-09	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.99
PDGPJJMA_01642	7.96e-235	-	-	-	-	-	-	-	-
PDGPJJMA_01643	2.25e-138	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
PDGPJJMA_01644	6.81e-236	-	-	-	V	-	-	-	N-Acetylmuramoyl-L-alanine amidase
PDGPJJMA_01645	2.35e-131	-	-	-	-	-	-	-	-
PDGPJJMA_01646	5.05e-153	-	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
PDGPJJMA_01647	1.39e-296	-	-	-	T	-	-	-	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PDGPJJMA_01648	7.14e-231	-	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator, LacI family
PDGPJJMA_01649	2.54e-112	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Amidohydrolase family
PDGPJJMA_01650	0.0	lacZ6	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.87
PDGPJJMA_01651	0.0	gph	-	-	G	ko:K16209	-	ko00000,ko02000	Psort location CytoplasmicMembrane, score 10.00
PDGPJJMA_01652	6.44e-21	-	-	-	S	ko:K18955	-	ko00000,ko03000	Transcription factor WhiB
PDGPJJMA_01654	6.71e-196	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PDGPJJMA_01655	2.2e-252	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
PDGPJJMA_01656	3.68e-100	-	-	-	S	-	-	-	Domain of unknown function (DUF4190)
PDGPJJMA_01659	1.48e-271	fucO	1.1.1.77, 1.1.99.37, 1.2.98.1	-	C	ko:K00048,ko:K17067	ko00625,ko00630,ko00640,ko00680,ko01120,ko01200,map00625,map00630,map00640,map00680,map01120,map01200	ko00000,ko00001,ko01000	Iron-containing alcohol dehydrogenase
PDGPJJMA_01660	1.89e-227	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PDGPJJMA_01661	0.0	-	-	-	S	-	-	-	AI-2E family transporter
PDGPJJMA_01662	3.97e-295	-	-	-	M	-	-	-	Glycosyl transferase family 21
PDGPJJMA_01663	1.07e-213	natA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PDGPJJMA_01664	0.0	-	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
PDGPJJMA_01665	0.0	dacB	3.4.16.4	-	M	ko:K07259	ko00550,map00550	ko00000,ko00001,ko01000,ko01002,ko01011	D-Ala-D-Ala carboxypeptidase 3 (S13) family
PDGPJJMA_01666	1.66e-267	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K00760,ko:K04075	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PDGPJJMA_01667	2.65e-127	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
PDGPJJMA_01668	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PDGPJJMA_01669	2.05e-130	folE	3.5.4.16	-	H	ko:K01495	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	GTP cyclohydrolase
PDGPJJMA_01670	7.56e-209	folP	2.5.1.15	-	H	ko:K00796	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PDGPJJMA_01671	0.0	folK	2.7.6.3, 4.1.2.25	-	H	ko:K00950,ko:K13940	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PDGPJJMA_01672	4.74e-107	-	-	-	S	-	-	-	Protein of unknown function (DUF3180)
PDGPJJMA_01673	1.88e-219	tesB	-	-	I	ko:K10805	ko01040,map01040	ko00000,ko00001,ko01000,ko01004	Thioesterase-like superfamily
PDGPJJMA_01674	0.0	-	3.2.1.52	GH20	G	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	ko00000,ko00001,ko00002,ko01000,ko03110	hydrolase family 20, catalytic
PDGPJJMA_01675	0.0	yjjK	-	-	S	-	-	-	ATP-binding cassette protein, ChvD family
PDGPJJMA_01676	8.74e-62	-	-	-	T	-	-	-	response regulator
PDGPJJMA_01677	2.83e-58	-	-	-	K	-	-	-	response regulator
PDGPJJMA_01678	3.67e-126	-	-	-	S	-	-	-	Domain of unknown function (DUF4825)
PDGPJJMA_01680	8.06e-34	fic	-	-	D	ko:K04095	-	ko00000,ko03036	Fic/DOC family
PDGPJJMA_01681	1.51e-87	fic	-	-	D	ko:K04095	-	ko00000,ko03036	Fic/DOC family
PDGPJJMA_01683	3.98e-116	-	-	-	S	-	-	-	Protein of unknown function (DUF3990)
PDGPJJMA_01684	3.61e-50	-	-	-	S	-	-	-	Protein of unknown function (DUF3791)
PDGPJJMA_01686	1.9e-73	-	-	-	M	-	-	-	domain, Protein
PDGPJJMA_01687	1.76e-161	-	-	-	-	-	-	-	-
PDGPJJMA_01689	3.55e-147	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PDGPJJMA_01690	1.27e-22	-	-	-	S	-	-	-	Protein of unknown function (DUF979)
PDGPJJMA_01691	7.1e-70	-	-	-	S	-	-	-	DUF218 domain
PDGPJJMA_01693	1.2e-141	-	-	-	S	ko:K07005	-	ko00000	Pyridoxamine 5'-phosphate oxidase
PDGPJJMA_01694	2.95e-201	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PDGPJJMA_01695	2.9e-75	-	-	-	EGP	ko:K18926	-	ko00000,ko00002,ko02000	Major facilitator Superfamily
PDGPJJMA_01696	0.0	-	-	-	S	-	-	-	ATPases associated with a variety of cellular activities
PDGPJJMA_01697	3.68e-229	glkA	2.7.1.2	-	G	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
PDGPJJMA_01698	6.04e-41	-	-	-	C	-	-	-	Aldo/keto reductase family
PDGPJJMA_01699	0.0	-	2.5.1.49	-	H	ko:K01740	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 9.98
PDGPJJMA_01700	4.24e-270	-	-	-	S	-	-	-	Psort location Cytoplasmic, score 8.87
PDGPJJMA_01701	1.3e-36	-	-	-	L	-	-	-	Transposase
PDGPJJMA_01703	4.1e-191	-	-	-	S	ko:K07090	-	ko00000	Sulfite exporter TauE/SafE
PDGPJJMA_01704	2.25e-66	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PDGPJJMA_01705	4.12e-06	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PDGPJJMA_01706	1.23e-210	-	-	-	EG	-	-	-	EamA-like transporter family
PDGPJJMA_01707	0.0	-	-	-	JKL	-	-	-	helicase superfamily c-terminal domain
PDGPJJMA_01708	1.96e-189	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
PDGPJJMA_01709	2.28e-218	-	5.1.3.15	-	G	ko:K01792	ko00010,ko01100,ko01110,ko01120,ko01130,map00010,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	Aldose 1-epimerase
PDGPJJMA_01710	1.77e-144	-	-	-	-	-	-	-	-
PDGPJJMA_01711	0.0	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	Mycolic acid cyclopropane synthetase
PDGPJJMA_01712	1.35e-239	iolG	1.1.1.18, 1.1.1.369	-	S	ko:K00010	ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130	ko00000,ko00001,ko01000	Oxidoreductase family, C-terminal alpha/beta domain
PDGPJJMA_01713	4.54e-208	-	-	-	G	ko:K05340	-	ko00000,ko02000	Sugar transport protein
PDGPJJMA_01714	4.61e-250	-	-	-	K	ko:K13633	-	ko00000,ko03000	helix_turn_helix, arabinose operon control protein
PDGPJJMA_01716	1.85e-48	rpmE	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the 23S rRNA
PDGPJJMA_01717	1.17e-246	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PDGPJJMA_01718	1.4e-235	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PDGPJJMA_01719	1.11e-79	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Bacterial transferase hexapeptide repeat protein
PDGPJJMA_01721	4.37e-241	pdxB	-	-	EH	-	-	-	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDGPJJMA_01722	6.39e-199	-	-	-	E	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
PDGPJJMA_01723	1.38e-183	-	-	-	EP	ko:K02031	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	oligopeptide transport protein of the ABC superfamily, ATP-binding component
PDGPJJMA_01724	5.04e-207	-	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PDGPJJMA_01725	1.41e-217	-	-	-	P	ko:K02033	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PDGPJJMA_01726	0.0	-	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substrate-binding protein, family 5
PDGPJJMA_01727	2.65e-184	coaX	2.7.1.33	-	H	ko:K03525	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PDGPJJMA_01728	0.0	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PDGPJJMA_01729	3.29e-82	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	carbohydrate transport
PDGPJJMA_01730	0.0	bga1	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	Psort location Cytoplasmic, score 8.87
PDGPJJMA_01731	2.96e-156	-	-	-	G	ko:K02026	-	ko00000,ko00002,ko02000	ABC transporter permease
PDGPJJMA_01732	4.2e-241	-	-	-	K	-	-	-	Periplasmic binding protein domain
PDGPJJMA_01733	0.0	-	3.2.1.51	GH29	G	ko:K01206	ko00511,map00511	ko00000,ko00001,ko01000,ko04147	Alpha-L-fucosidase
PDGPJJMA_01735	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PDGPJJMA_01736	2.38e-73	-	-	-	S	ko:K08972	-	ko00000	Mycobacterial 4 TMS phage holin, superfamily IV
PDGPJJMA_01737	0.0	aldH	1.2.1.3, 1.2.99.10	-	C	ko:K00128,ko:K22445	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldehyde dehydrogenase family
PDGPJJMA_01738	3.74e-180	hflK	-	-	O	-	-	-	prohibitin homologues
PDGPJJMA_01739	1.28e-310	-	2.5.1.49	-	E	ko:K01740	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	Cys/Met metabolism PLP-dependent enzyme
PDGPJJMA_01740	3.15e-298	metC1	4.4.1.8	-	E	ko:K01760	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Cys/Met metabolism PLP-dependent enzyme
PDGPJJMA_01741	0.0	nox	-	-	C	-	-	-	Pyridine nucleotide-disulphide oxidoreductase
PDGPJJMA_01742	5.53e-285	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
PDGPJJMA_01743	0.0	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PDGPJJMA_01744	0.0	-	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
PDGPJJMA_01745	2.11e-119	-	-	-	K	-	-	-	acetyltransferase
PDGPJJMA_01746	2.16e-103	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PDGPJJMA_01747	1.04e-249	-	-	-	C	ko:K19265	-	ko00000,ko01000	Aldo/keto reductase family
PDGPJJMA_01748	2.92e-131	-	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Exonuclease, DNA polymerase III, epsilon subunit family
PDGPJJMA_01749	9.67e-317	gltA	2.3.3.1	-	C	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Citrate synthase, C-terminal domain
PDGPJJMA_01750	6.17e-192	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine aminopeptidase
PDGPJJMA_01751	2.65e-194	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
PDGPJJMA_01752	0.0	pepO	3.4.24.11, 3.4.24.71	-	O	ko:K01389,ko:K01415,ko:K07386	ko04614,ko04640,ko04974,ko05010,map04614,map04640,map04974,map05010	ko00000,ko00001,ko01000,ko01002,ko04090,ko04147	Peptidase family M13
PDGPJJMA_01753	6.9e-157	ssb2	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Single-strand binding protein family
PDGPJJMA_01754	5.42e-219	-	-	-	-	-	-	-	-
PDGPJJMA_01755	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PDGPJJMA_01757	0.0	-	-	-	L	-	-	-	PIF1-like helicase
PDGPJJMA_01758	1.58e-202	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PDGPJJMA_01759	1.91e-156	orn	-	-	L	ko:K13288	ko03008,map03008	ko00000,ko00001,ko01000,ko03009,ko03019	3'-to-5' exoribonuclease specific for small oligoribonucleotides
PDGPJJMA_01760	1.45e-140	-	-	-	KT	ko:K02483	-	ko00000,ko02022	Transcriptional regulatory protein, C terminal
PDGPJJMA_01761	0.0	-	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha-amylase domain
PDGPJJMA_01762	0.0	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
PDGPJJMA_01763	7.46e-261	rfe	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	Glycosyl transferase family 4