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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
AMAGACPK_00001	9.14e-317	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
AMAGACPK_00002	6.57e-253	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_00003	3.26e-23	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
AMAGACPK_00004	2.65e-81	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
AMAGACPK_00005	3.37e-192	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
AMAGACPK_00006	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
AMAGACPK_00007	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
AMAGACPK_00008	0.0	pox1	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
AMAGACPK_00009	5.38e-39	-	-	-	-	-	-	-	-
AMAGACPK_00010	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
AMAGACPK_00011	0.0	-	-	-	L	-	-	-	Transposase DDE domain
AMAGACPK_00012	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
AMAGACPK_00013	1.98e-41	-	-	-	E	-	-	-	Zn peptidase
AMAGACPK_00014	8.29e-76	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
AMAGACPK_00015	2.35e-58	-	-	-	-	-	-	-	-
AMAGACPK_00016	1.06e-133	-	-	-	S	-	-	-	Bacteriocin helveticin-J
AMAGACPK_00017	5.44e-284	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_00018	1.14e-154	-	-	-	S	-	-	-	SLAP domain
AMAGACPK_00019	6.57e-175	-	-	-	S	-	-	-	SLAP domain
AMAGACPK_00020	1.12e-268	-	-	-	-	-	-	-	-
AMAGACPK_00021	6.46e-27	-	-	-	-	-	-	-	-
AMAGACPK_00022	2.71e-222	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
AMAGACPK_00023	3.24e-290	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
AMAGACPK_00024	1.03e-65	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
AMAGACPK_00025	7.41e-136	-	-	-	-	-	-	-	-
AMAGACPK_00026	6.63e-147	crp2	-	-	K	ko:K10914,ko:K21562	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	helix_turn_helix, cAMP Regulatory protein
AMAGACPK_00027	0.0	copA	3.6.3.3, 3.6.3.5, 3.6.3.54	-	P	ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
AMAGACPK_00028	4.44e-65	-	-	-	S	-	-	-	Cupredoxin-like domain
AMAGACPK_00029	2.52e-76	-	-	-	S	-	-	-	Cupredoxin-like domain
AMAGACPK_00030	2.23e-48	-	-	-	-	-	-	-	-
AMAGACPK_00034	2.27e-179	-	-	-	-	-	-	-	-
AMAGACPK_00035	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
AMAGACPK_00036	1.18e-82	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_00037	4.23e-46	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_00038	2.12e-86	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_00039	2.24e-36	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_00040	1.18e-82	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_00041	4.23e-46	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_00042	1.82e-293	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
AMAGACPK_00043	3.31e-154	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
AMAGACPK_00044	1.64e-45	-	-	-	-	-	-	-	-
AMAGACPK_00045	9.14e-281	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_00046	8.86e-210	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_00047	8.34e-116	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
AMAGACPK_00048	4.03e-75	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
AMAGACPK_00049	3.85e-97	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
AMAGACPK_00050	9.69e-292	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
AMAGACPK_00051	8.93e-180	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
AMAGACPK_00052	2.6e-93	-	-	-	-	-	-	-	-
AMAGACPK_00053	1.06e-159	dgk2	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
AMAGACPK_00054	9.85e-154	dak	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
AMAGACPK_00055	1.15e-173	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
AMAGACPK_00056	3.08e-205	-	-	-	S	-	-	-	Aldo/keto reductase family
AMAGACPK_00057	3.63e-221	yufQ	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
AMAGACPK_00058	3.87e-262	mglC	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
AMAGACPK_00059	0.0	mglA	3.6.3.17	-	S	ko:K02056,ko:K06400	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
AMAGACPK_00060	4.57e-232	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
AMAGACPK_00061	1.97e-255	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
AMAGACPK_00062	5.9e-130	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
AMAGACPK_00063	0.0	ppc	4.1.1.31	-	H	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
AMAGACPK_00064	0.0	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
AMAGACPK_00065	5.14e-248	-	-	-	S	-	-	-	DUF218 domain
AMAGACPK_00066	3.43e-155	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
AMAGACPK_00067	1.49e-141	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Transcriptional regulator
AMAGACPK_00068	5.9e-165	-	-	-	EGP	-	-	-	Major facilitator Superfamily
AMAGACPK_00069	2.9e-204	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMAGACPK_00070	1.52e-26	-	-	-	EGP	-	-	-	Major facilitator Superfamily
AMAGACPK_00071	1.05e-67	-	-	-	-	-	-	-	-
AMAGACPK_00072	1.91e-200	mutR	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
AMAGACPK_00073	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
AMAGACPK_00074	1.68e-55	yoeB	-	-	S	ko:K19158	-	ko00000,ko01000,ko02048	YoeB-like toxin of bacterial type II toxin-antitoxin system
AMAGACPK_00075	2.49e-63	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
AMAGACPK_00076	5.71e-263	napA	-	-	P	-	-	-	Sodium/hydrogen exchanger family
AMAGACPK_00077	0.0	cadA	-	-	P	-	-	-	P-type ATPase
AMAGACPK_00078	3.41e-107	ykuL	-	-	S	-	-	-	(CBS) domain
AMAGACPK_00079	0.0	-	-	-	L	-	-	-	Transposase
AMAGACPK_00080	5.11e-265	-	-	-	S	-	-	-	Membrane
AMAGACPK_00081	1.42e-58	-	-	-	-	-	-	-	-
AMAGACPK_00082	1.3e-26	-	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
AMAGACPK_00083	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
AMAGACPK_00084	2.95e-304	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
AMAGACPK_00085	4.98e-48	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
AMAGACPK_00086	6.8e-316	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
AMAGACPK_00087	1.97e-227	pbpX2	-	-	V	-	-	-	Beta-lactamase
AMAGACPK_00088	2.5e-172	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
AMAGACPK_00089	1.34e-183	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
AMAGACPK_00090	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
AMAGACPK_00091	1.96e-49	-	-	-	-	-	-	-	-
AMAGACPK_00092	0.0	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
AMAGACPK_00093	2.2e-161	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
AMAGACPK_00094	3.47e-285	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_00095	3.09e-304	pts13C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AMAGACPK_00096	7.86e-212	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
AMAGACPK_00097	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	AAA domain (Cdc48 subfamily)
AMAGACPK_00098	5.08e-149	sipS3	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
AMAGACPK_00099	2.58e-310	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
AMAGACPK_00100	5.27e-314	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
AMAGACPK_00101	6.36e-173	-	-	-	S	-	-	-	PFAM Archaeal ATPase
AMAGACPK_00102	1.95e-221	-	-	-	V	-	-	-	HNH endonuclease
AMAGACPK_00104	6.65e-179	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
AMAGACPK_00105	6.45e-291	-	-	-	E	-	-	-	amino acid
AMAGACPK_00106	5.12e-242	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
AMAGACPK_00107	1.6e-291	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_00108	1.84e-263	-	4.2.1.126	-	S	ko:K07106,ko:K09963	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Bacterial protein of unknown function (DUF871)
AMAGACPK_00111	1.35e-238	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
AMAGACPK_00112	0.0	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AMAGACPK_00113	7.13e-313	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AMAGACPK_00114	1.41e-284	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_00115	1.01e-38	-	-	-	S	-	-	-	HicA toxin of bacterial toxin-antitoxin,
AMAGACPK_00116	2.27e-71	-	-	-	S	-	-	-	protein encoded in hypervariable junctions of pilus gene clusters
AMAGACPK_00117	7.26e-35	-	-	-	S	-	-	-	Protein conserved in bacteria
AMAGACPK_00118	1.09e-74	-	-	-	-	-	-	-	-
AMAGACPK_00119	6.77e-111	-	-	-	-	-	-	-	-
AMAGACPK_00120	0.0	yheS_2	-	-	S	ko:K18231,ko:K19349	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ATPases associated with a variety of cellular activities
AMAGACPK_00121	1.84e-238	-	-	-	S	-	-	-	DUF218 domain
AMAGACPK_00122	9.07e-143	-	-	-	-	-	-	-	-
AMAGACPK_00123	1.32e-137	-	-	-	-	-	-	-	-
AMAGACPK_00124	3.75e-178	yicL	-	-	EG	-	-	-	EamA-like transporter family
AMAGACPK_00125	3.18e-209	-	-	-	EG	-	-	-	EamA-like transporter family
AMAGACPK_00126	4.48e-206	-	-	-	EG	-	-	-	EamA-like transporter family
AMAGACPK_00127	5.51e-47	-	-	-	-	-	-	-	-
AMAGACPK_00128	1.03e-07	-	-	-	-	-	-	-	-
AMAGACPK_00129	1.02e-200	-	-	-	-	-	-	-	-
AMAGACPK_00132	8.6e-108	-	-	-	M	-	-	-	NlpC/P60 family
AMAGACPK_00133	1.51e-168	cobQ	-	-	S	ko:K07009	-	ko00000	glutamine amidotransferase
AMAGACPK_00134	6.69e-84	-	-	-	L	-	-	-	RelB antitoxin
AMAGACPK_00135	1.83e-91	-	-	-	V	-	-	-	ABC transporter transmembrane region
AMAGACPK_00136	3.65e-285	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMAGACPK_00137	2.18e-161	-	-	-	V	-	-	-	ABC transporter transmembrane region
AMAGACPK_00138	4.12e-204	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMAGACPK_00139	1.74e-248	-	-	-	G	-	-	-	Transmembrane secretion effector
AMAGACPK_00140	3.66e-186	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
AMAGACPK_00141	2.26e-244	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_00142	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AMAGACPK_00143	1e-131	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
AMAGACPK_00144	8.5e-208	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_00145	4.24e-46	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
AMAGACPK_00146	6.36e-230	yvdE	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
AMAGACPK_00147	3.21e-244	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_00148	2.05e-179	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMAGACPK_00149	5.44e-284	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_00150	1.59e-147	aapA	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
AMAGACPK_00151	7.88e-59	-	-	-	L	-	-	-	Transposase, IS116 IS110 IS902 family
AMAGACPK_00152	4.92e-207	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_00153	0.0	-	-	-	M	-	-	-	Rib/alpha-like repeat
AMAGACPK_00154	0.0	malA1	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain
AMAGACPK_00155	0.0	nplT	3.2.1.133, 3.2.1.135, 3.2.1.54	GH13	G	ko:K01208	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
AMAGACPK_00156	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
AMAGACPK_00157	7.7e-149	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
AMAGACPK_00158	2.85e-266	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
AMAGACPK_00159	2.73e-282	-	-	-	G	ko:K15770	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
AMAGACPK_00160	0.0	malF	-	-	P	ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
AMAGACPK_00161	1.39e-197	malG	-	-	P	ko:K15772	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
AMAGACPK_00162	4.73e-84	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
AMAGACPK_00166	3.38e-230	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_00167	3.32e-284	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_00169	1.86e-114	ymdB	-	-	S	-	-	-	Macro domain protein
AMAGACPK_00170	2.26e-244	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_00171	6.74e-212	mdtG2	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
AMAGACPK_00172	7.62e-223	-	-	-	-	-	-	-	-
AMAGACPK_00173	2.2e-79	lysM	-	-	M	-	-	-	LysM domain
AMAGACPK_00174	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
AMAGACPK_00175	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
AMAGACPK_00176	6.93e-34	-	-	-	S	-	-	-	Sugar efflux transporter for intercellular exchange
AMAGACPK_00177	5.3e-92	-	-	-	K	-	-	-	LytTr DNA-binding domain
AMAGACPK_00178	1.05e-119	-	-	-	S	-	-	-	membrane
AMAGACPK_00179	2.61e-23	-	-	-	-	-	-	-	-
AMAGACPK_00180	3.58e-251	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
AMAGACPK_00181	9.18e-202	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
AMAGACPK_00182	5.5e-155	-	-	-	-	-	-	-	-
AMAGACPK_00183	9.13e-157	-	-	-	L	-	-	-	PFAM transposase IS116 IS110 IS902
AMAGACPK_00184	1.45e-183	XK27_08125	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
AMAGACPK_00185	9.79e-181	-	-	-	S	ko:K06889	-	ko00000	Alpha/beta hydrolase family
AMAGACPK_00186	8.1e-238	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_00187	2.75e-143	-	-	-	G	-	-	-	phosphoglycerate mutase
AMAGACPK_00188	1.45e-119	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
AMAGACPK_00189	1.05e-233	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
AMAGACPK_00190	7.09e-131	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
AMAGACPK_00191	0.0	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
AMAGACPK_00192	3.75e-243	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_00193	2.63e-50	-	-	-	-	-	-	-	-
AMAGACPK_00194	1.25e-143	-	-	-	K	-	-	-	WHG domain
AMAGACPK_00195	3.41e-125	azo1	1.5.1.36, 1.7.1.6	-	S	ko:K03206,ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
AMAGACPK_00196	2.58e-126	azr	1.5.1.36	-	S	ko:K22394	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
AMAGACPK_00197	9.48e-194	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
AMAGACPK_00198	5.24e-230	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
AMAGACPK_00200	2.99e-75	cvpA	-	-	S	-	-	-	Colicin V production protein
AMAGACPK_00201	2.24e-36	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_00202	2.12e-86	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_00203	3.66e-166	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
AMAGACPK_00204	5.86e-191	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
AMAGACPK_00205	4.99e-178	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
AMAGACPK_00206	4.28e-197	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
AMAGACPK_00207	1.1e-59	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
AMAGACPK_00208	6.88e-257	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
AMAGACPK_00209	3.93e-176	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
AMAGACPK_00210	1.22e-190	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter, ATP-binding protein
AMAGACPK_00211	1.68e-179	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter, ATP-binding protein
AMAGACPK_00212	0.0	ndvA	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
AMAGACPK_00214	8.32e-157	vanR	-	-	K	-	-	-	response regulator
AMAGACPK_00215	9.28e-271	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
AMAGACPK_00216	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AMAGACPK_00217	7.79e-186	racD	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
AMAGACPK_00218	6.94e-70	-	-	-	S	-	-	-	Enterocin A Immunity
AMAGACPK_00219	1.95e-45	-	-	-	-	-	-	-	-
AMAGACPK_00220	1.07e-35	-	-	-	-	-	-	-	-
AMAGACPK_00221	4.48e-34	-	-	-	-	-	-	-	-
AMAGACPK_00222	0.0	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
AMAGACPK_00223	0.0	agl	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
AMAGACPK_00224	0.0	-	-	-	S	ko:K06921	-	ko00000	Archaea bacterial proteins of unknown function
AMAGACPK_00225	1.89e-23	-	-	-	-	-	-	-	-
AMAGACPK_00226	7.34e-178	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
AMAGACPK_00227	2.08e-164	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
AMAGACPK_00228	0.0	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
AMAGACPK_00229	3.21e-244	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_00230	3.89e-129	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
AMAGACPK_00231	7.86e-138	mesE	-	-	M	ko:K12293,ko:K20345	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko02000	Transport protein ComB
AMAGACPK_00232	5.02e-180	blpT	-	-	-	-	-	-	-
AMAGACPK_00236	7.87e-30	-	-	-	-	-	-	-	-
AMAGACPK_00237	4.74e-107	-	-	-	-	-	-	-	-
AMAGACPK_00238	6.32e-42	-	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
AMAGACPK_00239	2.52e-32	-	-	-	-	-	-	-	-
AMAGACPK_00240	3.41e-88	-	-	-	-	-	-	-	-
AMAGACPK_00241	3.09e-212	natA	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
AMAGACPK_00242	6.39e-279	natB	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
AMAGACPK_00243	3.14e-175	fruR	-	-	K	ko:K03436	-	ko00000,ko03000	DeoR C terminal sensor domain
AMAGACPK_00244	2.18e-215	pfkB	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family. LacC subfamily
AMAGACPK_00245	0.0	fruA	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase System
AMAGACPK_00246	4.47e-56	-	-	-	K	ko:K21903	-	ko00000,ko03000	helix_turn_helix, Arsenical Resistance Operon Repressor
AMAGACPK_00247	9.9e-209	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
AMAGACPK_00248	1.63e-152	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
AMAGACPK_00249	1.59e-172	znuB	-	-	U	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
AMAGACPK_00250	0.0	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
AMAGACPK_00251	6.6e-115	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
AMAGACPK_00252	2.04e-277	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
AMAGACPK_00253	0.000868	-	-	-	-	-	-	-	-
AMAGACPK_00254	1.13e-35	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
AMAGACPK_00256	5.34e-211	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_00257	9.95e-285	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_00258	1.79e-99	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
AMAGACPK_00259	1.64e-101	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
AMAGACPK_00260	4.18e-33	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
AMAGACPK_00261	0.0	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
AMAGACPK_00262	1.23e-54	-	-	-	V	ko:K20345	ko02024,map02024	ko00000,ko00001,ko02000	HlyD family secretion protein
AMAGACPK_00264	1.5e-27	-	-	-	S	-	-	-	Enterocin A Immunity
AMAGACPK_00265	5.34e-211	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_00268	5.75e-284	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_00270	4.61e-37	-	-	-	S	-	-	-	Enterocin A Immunity
AMAGACPK_00273	1.47e-91	doc	-	-	S	ko:K07341	-	ko00000,ko02048	Prophage maintenance system killer protein
AMAGACPK_00274	7.27e-42	-	-	-	-	-	-	-	-
AMAGACPK_00275	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
AMAGACPK_00276	5.74e-256	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
AMAGACPK_00277	2.33e-143	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
AMAGACPK_00278	7.2e-40	-	-	-	-	-	-	-	-
AMAGACPK_00279	5.49e-46	-	-	-	-	-	-	-	-
AMAGACPK_00280	8.69e-93	rimL	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
AMAGACPK_00281	2.52e-76	-	-	-	-	-	-	-	-
AMAGACPK_00282	0.0	-	-	-	S	-	-	-	ABC transporter
AMAGACPK_00283	7.35e-174	-	-	-	S	-	-	-	Putative threonine/serine exporter
AMAGACPK_00284	7.36e-109	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
AMAGACPK_00285	1.58e-143	-	-	-	S	-	-	-	Peptidase_C39 like family
AMAGACPK_00286	1.16e-101	-	-	-	-	-	-	-	-
AMAGACPK_00287	1.96e-226	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AMAGACPK_00288	2.75e-100	nrdI	-	-	F	ko:K03647	-	ko00000	NrdI Flavodoxin like
AMAGACPK_00289	5.48e-283	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
AMAGACPK_00290	8.77e-144	-	-	-	-	-	-	-	-
AMAGACPK_00291	0.0	-	-	-	S	-	-	-	O-antigen ligase like membrane protein
AMAGACPK_00292	4.52e-56	-	-	-	-	-	-	-	-
AMAGACPK_00293	4.26e-115	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase homologues.
AMAGACPK_00294	1.47e-114	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
AMAGACPK_00295	1.28e-174	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
AMAGACPK_00296	1.73e-167	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
AMAGACPK_00297	3.01e-54	-	-	-	-	-	-	-	-
AMAGACPK_00298	1.26e-223	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
AMAGACPK_00299	2.73e-284	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AMAGACPK_00302	8.14e-241	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
AMAGACPK_00303	5.52e-187	epsB	-	-	M	-	-	-	biosynthesis protein
AMAGACPK_00304	5.61e-160	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
AMAGACPK_00305	2.22e-184	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
AMAGACPK_00306	2.91e-140	epsE2	-	-	M	-	-	-	Bacterial sugar transferase
AMAGACPK_00307	9.92e-152	cps3J	-	-	M	-	-	-	Domain of unknown function (DUF4422)
AMAGACPK_00309	4.12e-204	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMAGACPK_00311	2.49e-08	-	-	-	S	ko:K07011	-	ko00000	Glycosyltransferase like family 2
AMAGACPK_00312	6.24e-210	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_00313	3.96e-84	epsIIG	1.1.1.133	-	S	ko:K00067,ko:K07011	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Glycosyltransferase, group 2 family protein
AMAGACPK_00314	1.81e-91	-	-	-	M	-	-	-	Glycosyltransferase, group 1 family protein
AMAGACPK_00315	1.63e-52	-	-	-	M	-	-	-	Glycosyl transferase family 2
AMAGACPK_00316	3.24e-290	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
AMAGACPK_00317	9.54e-283	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_00318	0.0	malH	3.2.1.122	GH4	G	ko:K01232	ko00500,map00500	ko00000,ko00001,ko01000	Family 4 glycosyl hydrolase C-terminal domain
AMAGACPK_00319	8.28e-176	-	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
AMAGACPK_00320	7.81e-238	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase, type I
AMAGACPK_00321	4.65e-14	-	-	-	-	-	-	-	-
AMAGACPK_00322	1.42e-57	-	-	-	-	-	-	-	-
AMAGACPK_00323	5.34e-211	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_00324	6.28e-87	-	2.7.1.191	-	G	ko:K02793	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
AMAGACPK_00325	0.0	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
AMAGACPK_00326	1.34e-162	-	-	-	-	-	-	-	-
AMAGACPK_00327	1.87e-308	-	-	-	S	-	-	-	response to antibiotic
AMAGACPK_00328	9.95e-285	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_00329	1.91e-236	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_00330	7.53e-163	gpm2	-	-	G	-	-	-	Phosphoglycerate mutase family
AMAGACPK_00331	1.51e-150	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
AMAGACPK_00332	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
AMAGACPK_00333	3e-139	yecS_2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
AMAGACPK_00334	3.27e-115	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
AMAGACPK_00335	7.09e-184	aatB	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
AMAGACPK_00336	1.36e-96	yjcF	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
AMAGACPK_00337	1.88e-125	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
AMAGACPK_00338	1.95e-218	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
AMAGACPK_00339	1.48e-134	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AMAGACPK_00340	1.24e-75	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
AMAGACPK_00341	5.23e-156	-	-	-	L	-	-	-	PFAM transposase IS116 IS110 IS902
AMAGACPK_00342	2.15e-299	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMAGACPK_00343	1.45e-36	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
AMAGACPK_00344	1.73e-79	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
AMAGACPK_00345	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
AMAGACPK_00346	1.13e-201	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter transmembrane region
AMAGACPK_00347	2.91e-83	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter transmembrane region
AMAGACPK_00348	8.64e-85	yybA	-	-	K	-	-	-	Transcriptional regulator
AMAGACPK_00349	8e-108	XK27_03150	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
AMAGACPK_00350	5.59e-109	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
AMAGACPK_00351	2.88e-98	ykoJ	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
AMAGACPK_00352	2.37e-242	-	-	-	T	-	-	-	GHKL domain
AMAGACPK_00353	1.75e-168	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
AMAGACPK_00354	1.28e-228	pepR	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
AMAGACPK_00355	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
AMAGACPK_00356	8.86e-210	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_00357	4.4e-165	-	-	-	S	-	-	-	PAS domain
AMAGACPK_00359	2.62e-69	-	-	-	-	-	-	-	-
AMAGACPK_00360	1.02e-75	-	-	-	-	-	-	-	-
AMAGACPK_00361	4.53e-11	-	-	-	-	-	-	-	-
AMAGACPK_00362	5.6e-291	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
AMAGACPK_00363	6.97e-289	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
AMAGACPK_00364	3.85e-180	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
AMAGACPK_00365	1.3e-94	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
AMAGACPK_00366	2.23e-150	yviA	-	-	S	-	-	-	Protein of unknown function (DUF421)
AMAGACPK_00367	5.11e-203	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AMAGACPK_00368	1.29e-230	-	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	EXOIII
AMAGACPK_00369	7.24e-204	endA	-	-	F	ko:K15051	-	ko00000	DNA RNA non-specific endonuclease
AMAGACPK_00370	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
AMAGACPK_00371	5.26e-259	malK	-	-	P	ko:K10112,ko:K17240	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
AMAGACPK_00372	1.64e-202	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	ABC-type sugar transport systems, permease components
AMAGACPK_00373	5.62e-187	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
AMAGACPK_00374	0.0	-	-	-	S	-	-	-	Zn-dependent metallo-hydrolase RNA specificity domain
AMAGACPK_00375	1.23e-309	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
AMAGACPK_00376	1.4e-207	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
AMAGACPK_00377	1.89e-205	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
AMAGACPK_00378	1.53e-127	yobS	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
AMAGACPK_00379	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
AMAGACPK_00381	1.86e-31	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
AMAGACPK_00382	5.89e-170	-	-	-	-	-	-	-	-
AMAGACPK_00383	6.82e-292	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
AMAGACPK_00384	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
AMAGACPK_00385	2.35e-117	-	-	-	F	-	-	-	Nucleoside 2-deoxyribosyltransferase
AMAGACPK_00386	1.41e-37	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
AMAGACPK_00387	1.19e-19	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
AMAGACPK_00388	4.06e-109	plcR	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
AMAGACPK_00389	0.0	-	-	-	L	-	-	-	Transposase DDE domain
AMAGACPK_00390	6.76e-80	plcR	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
AMAGACPK_00391	1.77e-194	-	-	-	I	-	-	-	alpha/beta hydrolase fold
AMAGACPK_00392	3.2e-143	-	-	-	S	-	-	-	SNARE associated Golgi protein
AMAGACPK_00393	1.23e-129	yjcK	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
AMAGACPK_00394	0.0	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AMAGACPK_00395	4.98e-37	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
AMAGACPK_00396	1.44e-53	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
AMAGACPK_00397	9.06e-184	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
AMAGACPK_00398	1.38e-165	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
AMAGACPK_00399	4.68e-180	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_00400	4.47e-148	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
AMAGACPK_00401	7.7e-126	-	-	-	L	-	-	-	Helix-turn-helix domain
AMAGACPK_00402	3.84e-113	-	-	-	S	-	-	-	COG NOG38524 non supervised orthologous group
AMAGACPK_00404	2.72e-236	manL	2.7.1.191	-	G	ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
AMAGACPK_00405	9.65e-181	manY	-	-	G	ko:K02746,ko:K02795	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system
AMAGACPK_00406	3.51e-222	manN	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	system, mannose fructose sorbose family IID component
AMAGACPK_00407	1.31e-81	-	-	-	S	-	-	-	Domain of unknown function (DUF956)
AMAGACPK_00408	2.07e-203	-	-	-	K	-	-	-	Transcriptional regulator
AMAGACPK_00409	7.06e-111	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
AMAGACPK_00410	1.38e-309	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
AMAGACPK_00411	4.47e-58	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
AMAGACPK_00412	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
AMAGACPK_00413	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
AMAGACPK_00414	0.0	mtlR	-	-	K	ko:K03483	-	ko00000,ko03000	Mga helix-turn-helix domain
AMAGACPK_00415	0.0	mtlA	2.7.1.197	-	G	ko:K02799,ko:K02800	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
AMAGACPK_00416	5.75e-103	mtlF	2.7.1.197	-	G	ko:K02798	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AMAGACPK_00417	5.37e-260	mtlD	1.1.1.17	-	C	ko:K00009	ko00051,map00051	ko00000,ko00001,ko01000	mannitol-1-phosphate 5-dehydrogenase activity
AMAGACPK_00418	1.1e-37	plcR	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
AMAGACPK_00419	0.0	-	-	-	L	-	-	-	Transposase DDE domain
AMAGACPK_00420	0.0	-	-	-	L	-	-	-	Transposase
AMAGACPK_00421	5.26e-36	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
AMAGACPK_00422	1.78e-100	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
AMAGACPK_00423	3.36e-42	-	-	-	-	-	-	-	-
AMAGACPK_00424	9.05e-78	apfA	3.6.1.61	-	F	ko:K18445	ko00230,map00230	ko00000,ko00001,ko01000	Nudix hydrolase
AMAGACPK_00425	6.94e-202	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
AMAGACPK_00426	8.86e-210	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_00427	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
AMAGACPK_00428	0.0	pckA	4.1.1.49	-	H	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Phosphoenolpyruvate carboxykinase
AMAGACPK_00429	1.23e-242	-	-	-	S	-	-	-	TerB-C domain
AMAGACPK_00430	6.24e-210	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_00431	5.53e-173	-	-	-	S	-	-	-	TerB-C domain
AMAGACPK_00432	2.14e-312	-	-	-	P	-	-	-	P-loop Domain of unknown function (DUF2791)
AMAGACPK_00433	0.0	-	-	-	L	ko:K03724	-	ko00000,ko01000,ko03400	DEAD DEAH box helicase
AMAGACPK_00434	7.82e-80	-	-	-	-	-	-	-	-
AMAGACPK_00435	1.49e-290	amt	-	-	P	ko:K03320	-	ko00000,ko02000	ammonium transporter
AMAGACPK_00436	6.58e-175	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
AMAGACPK_00438	4.51e-77	psiE	-	-	S	ko:K13256	-	ko00000	Phosphate-starvation-inducible E
AMAGACPK_00439	1.08e-145	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
AMAGACPK_00440	3.65e-90	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
AMAGACPK_00442	1.04e-41	-	-	-	-	-	-	-	-
AMAGACPK_00443	2.77e-220	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase
AMAGACPK_00444	1.25e-17	-	-	-	-	-	-	-	-
AMAGACPK_00445	1.83e-22	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AMAGACPK_00446	6.31e-99	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AMAGACPK_00447	2.57e-108	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AMAGACPK_00448	0.0	-	-	-	L	-	-	-	Transposase
AMAGACPK_00449	1.33e-130	-	-	-	M	-	-	-	LysM domain protein
AMAGACPK_00450	8.86e-210	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_00451	2.37e-203	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMAGACPK_00452	5.68e-211	-	-	-	D	-	-	-	nuclear chromosome segregation
AMAGACPK_00453	8.92e-136	-	-	-	G	-	-	-	Phosphoglycerate mutase family
AMAGACPK_00454	9.01e-115	-	-	-	G	-	-	-	Histidine phosphatase superfamily (branch 1)
AMAGACPK_00455	2.22e-152	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
AMAGACPK_00456	2.67e-148	glpQ1	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
AMAGACPK_00458	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
AMAGACPK_00459	1.93e-266	araT	2.6.1.57	-	E	ko:K00832,ko:K00841	ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
AMAGACPK_00460	1.03e-237	XK27_10475	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
AMAGACPK_00461	3.01e-154	rpiA1	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
AMAGACPK_00462	1.43e-186	-	-	-	K	-	-	-	SIS domain
AMAGACPK_00463	9.6e-309	slpX	-	-	S	-	-	-	SLAP domain
AMAGACPK_00464	6.39e-32	-	-	-	S	-	-	-	transposase or invertase
AMAGACPK_00465	1.18e-13	-	-	-	-	-	-	-	-
AMAGACPK_00466	4.41e-305	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	NADH oxidase
AMAGACPK_00469	7.83e-303	oppA2	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
AMAGACPK_00470	1.15e-54	oppA2	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
AMAGACPK_00471	2.17e-232	-	-	-	-	-	-	-	-
AMAGACPK_00472	1.87e-159	gntR1	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
AMAGACPK_00473	3.68e-93	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Glycerol-3-phosphate cytidylyltransferase
AMAGACPK_00474	3.02e-171	tagA	2.4.1.187	GT26	F	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
AMAGACPK_00475	1.03e-261	-	-	-	M	-	-	-	Glycosyl transferases group 1
AMAGACPK_00476	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AMAGACPK_00477	1.91e-195	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
AMAGACPK_00478	9.83e-261	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
AMAGACPK_00479	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
AMAGACPK_00480	9.16e-287	-	-	-	M	-	-	-	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
AMAGACPK_00481	0.0	epsU	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
AMAGACPK_00482	5.48e-173	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
AMAGACPK_00483	2.62e-109	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
AMAGACPK_00485	2.26e-118	acmA	3.2.1.17, 3.2.1.96	-	NU	ko:K01185,ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	mannosyl-glycoprotein
AMAGACPK_00486	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
AMAGACPK_00487	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AMAGACPK_00488	6.25e-268	camS	-	-	S	-	-	-	sex pheromone
AMAGACPK_00489	5.42e-67	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AMAGACPK_00490	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
AMAGACPK_00491	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AMAGACPK_00492	5.58e-219	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
AMAGACPK_00493	2.61e-148	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
AMAGACPK_00494	1.46e-75	-	-	-	-	-	-	-	-
AMAGACPK_00495	9.92e-187	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
AMAGACPK_00496	2.79e-309	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
AMAGACPK_00497	1.01e-256	flp	-	-	V	-	-	-	Beta-lactamase
AMAGACPK_00498	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AMAGACPK_00499	1.42e-122	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
AMAGACPK_00504	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
AMAGACPK_00505	1.52e-119	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
AMAGACPK_00506	0.0	-	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
AMAGACPK_00507	6.61e-186	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
AMAGACPK_00508	2.14e-289	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_00509	6.13e-110	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
AMAGACPK_00510	5.94e-200	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
AMAGACPK_00511	8.97e-47	-	-	-	-	-	-	-	-
AMAGACPK_00512	1.96e-127	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative DNA-binding domain
AMAGACPK_00513	1.26e-209	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_00514	9.95e-285	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_00515	3.55e-28	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative DNA-binding domain
AMAGACPK_00516	3.34e-303	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
AMAGACPK_00517	1.02e-115	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
AMAGACPK_00518	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
AMAGACPK_00519	0.0	-	-	-	L	-	-	-	Transposase
AMAGACPK_00520	1.22e-192	pmrA	-	-	EGP	ko:K08161	-	ko00000,ko02000	MFS_1 like family
AMAGACPK_00521	3.75e-243	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_00522	2.33e-230	pepA	-	-	E	-	-	-	M42 glutamyl aminopeptidase
AMAGACPK_00523	0.0	ykpA	-	-	S	-	-	-	ABC transporter, ATP-binding protein
AMAGACPK_00524	6.07e-223	ydhF	-	-	S	-	-	-	Aldo keto reductase
AMAGACPK_00525	1.89e-218	-	-	-	L	-	-	-	Bifunctional protein
AMAGACPK_00526	1.53e-176	-	-	-	-	-	-	-	-
AMAGACPK_00527	1.11e-256	steT	-	-	E	ko:K03294	-	ko00000	amino acid
AMAGACPK_00528	3.97e-33	steT	-	-	E	ko:K03294	-	ko00000	amino acid
AMAGACPK_00529	3.41e-312	steT	-	-	E	ko:K03294	-	ko00000	amino acid
AMAGACPK_00530	1.07e-165	-	-	-	F	-	-	-	glutamine amidotransferase
AMAGACPK_00531	2.05e-188	peb1A	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
AMAGACPK_00532	2.53e-106	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
AMAGACPK_00533	0.0	XK27_09600	-	-	V	ko:K06147,ko:K18891	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
AMAGACPK_00534	0.0	XK27_09605	-	-	V	ko:K18892	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter transmembrane region
AMAGACPK_00535	1.72e-129	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
AMAGACPK_00536	8.41e-314	-	-	-	G	-	-	-	MFS/sugar transport protein
AMAGACPK_00537	1.09e-57	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Zeta toxin
AMAGACPK_00538	2.72e-60	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Zeta toxin
AMAGACPK_00539	2.8e-173	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
AMAGACPK_00540	3.39e-187	glnH	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
AMAGACPK_00541	4.29e-122	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
AMAGACPK_00542	3.65e-141	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
AMAGACPK_00543	1.04e-211	-	-	-	S	-	-	-	Protein of unknown function (DUF2974)
AMAGACPK_00544	2.09e-110	-	-	-	-	-	-	-	-
AMAGACPK_00545	3.47e-285	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_00546	3.52e-296	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
AMAGACPK_00547	6.59e-296	-	-	-	L	-	-	-	Transposase DDE domain
AMAGACPK_00548	2.2e-308	srrA1	-	-	G	ko:K02027,ko:K17244	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
AMAGACPK_00549	7.29e-209	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
AMAGACPK_00550	8.52e-215	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AMAGACPK_00551	1.82e-161	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
AMAGACPK_00552	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
AMAGACPK_00553	1.01e-222	rihC	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
AMAGACPK_00554	6.63e-174	gntR	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
AMAGACPK_00555	3.18e-198	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
AMAGACPK_00556	2.9e-79	-	-	-	S	-	-	-	Enterocin A Immunity
AMAGACPK_00557	4.44e-174	-	-	-	K	ko:K22103	-	ko00000,ko03000	DeoR C terminal sensor domain
AMAGACPK_00558	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
AMAGACPK_00559	1.85e-205	-	-	-	S	-	-	-	Phospholipase, patatin family
AMAGACPK_00560	7.44e-189	-	-	-	S	-	-	-	hydrolase
AMAGACPK_00561	0.0	glvC	2.7.1.208	-	G	ko:K02749,ko:K02750	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
AMAGACPK_00562	6.89e-190	glvR	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
AMAGACPK_00563	1.52e-103	-	-	-	-	-	-	-	-
AMAGACPK_00564	1.96e-113	ptbA	2.7.1.208	-	G	ko:K02755,ko:K02777,ko:K20107,ko:K20108	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
AMAGACPK_00565	1.76e-52	-	-	-	-	-	-	-	-
AMAGACPK_00566	2.14e-154	-	-	-	C	-	-	-	nitroreductase
AMAGACPK_00567	0.0	yhdP	-	-	S	-	-	-	Transporter associated domain
AMAGACPK_00568	8.59e-133	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
AMAGACPK_00569	0.0	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
AMAGACPK_00570	4.28e-114	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMAGACPK_00571	5.83e-67	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMAGACPK_00572	6.74e-269	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
AMAGACPK_00573	7.32e-157	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
AMAGACPK_00574	1.78e-241	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_00575	2.22e-296	-	-	-	E	ko:K03294	-	ko00000	amino acid
AMAGACPK_00576	2.14e-289	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_00577	6.73e-78	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
AMAGACPK_00578	2.16e-79	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
AMAGACPK_00579	5.96e-283	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
AMAGACPK_00580	3.76e-316	chbC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AMAGACPK_00582	1.62e-278	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
AMAGACPK_00583	3.5e-292	-	-	-	L	-	-	-	Transposase DDE domain
AMAGACPK_00584	1.63e-180	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_00585	7.46e-113	gtcA1	-	-	S	-	-	-	Teichoic acid glycosylation protein
AMAGACPK_00586	5.14e-105	ykuP	-	-	C	ko:K03839	-	ko00000	Flavodoxin
AMAGACPK_00587	1.34e-284	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_00588	9.98e-211	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
AMAGACPK_00589	9.85e-209	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
AMAGACPK_00590	3.22e-215	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
AMAGACPK_00591	2.12e-273	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
AMAGACPK_00592	4.42e-269	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
AMAGACPK_00593	0.0	-	-	-	L	-	-	-	Transposase
AMAGACPK_00594	7.74e-61	-	-	-	-	-	-	-	-
AMAGACPK_00595	1.04e-48	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
AMAGACPK_00596	1.59e-149	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
AMAGACPK_00597	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AMAGACPK_00598	2.79e-185	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
AMAGACPK_00599	1.74e-111	-	-	-	-	-	-	-	-
AMAGACPK_00600	7.76e-98	-	-	-	-	-	-	-	-
AMAGACPK_00601	1.76e-181	hlyX	-	-	S	ko:K03699	-	ko00000,ko02042	Transporter associated domain
AMAGACPK_00602	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
AMAGACPK_00603	5.93e-60	XK27_09445	-	-	S	-	-	-	Domain of unknown function (DUF1827)
AMAGACPK_00604	0.0	clpE	-	-	O	ko:K03697	-	ko00000,ko03110	Belongs to the ClpA ClpB family
AMAGACPK_00605	1.28e-168	-	-	-	L	-	-	-	PFAM transposase IS116 IS110 IS902
AMAGACPK_00606	2.6e-37	-	-	-	-	-	-	-	-
AMAGACPK_00607	1.29e-54	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
AMAGACPK_00608	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AMAGACPK_00609	7.34e-86	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
AMAGACPK_00610	1.5e-178	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
AMAGACPK_00611	2.63e-205	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
AMAGACPK_00612	5.74e-148	yjbH	-	-	Q	-	-	-	Thioredoxin
AMAGACPK_00613	2.44e-143	-	-	-	S	-	-	-	CYTH
AMAGACPK_00614	1.7e-147	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
AMAGACPK_00615	1.91e-195	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AMAGACPK_00616	7.96e-221	rluD2	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
AMAGACPK_00617	0.0	mycA	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
AMAGACPK_00618	3.77e-122	-	-	-	S	-	-	-	SNARE associated Golgi protein
AMAGACPK_00619	1.01e-255	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
AMAGACPK_00620	2.26e-244	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_00621	1.99e-87	srlB	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
AMAGACPK_00622	2.19e-270	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
AMAGACPK_00623	2.12e-136	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
AMAGACPK_00624	3.12e-91	-	-	-	S	-	-	-	Protein of unknown function (DUF1149)
AMAGACPK_00625	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
AMAGACPK_00626	1.47e-284	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
AMAGACPK_00627	5.49e-301	ymfH	-	-	S	-	-	-	Peptidase M16
AMAGACPK_00628	1.39e-171	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
AMAGACPK_00629	1.63e-154	ymfM	-	-	S	ko:K15539	-	ko00000	Helix-turn-helix domain
AMAGACPK_00630	3.92e-123	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AMAGACPK_00631	1.17e-248	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
AMAGACPK_00632	3.03e-293	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
AMAGACPK_00633	1.94e-268	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	transferase
AMAGACPK_00634	5.04e-154	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
AMAGACPK_00635	2.68e-314	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
AMAGACPK_00636	9.44e-169	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
AMAGACPK_00637	1.55e-122	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AMAGACPK_00638	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
AMAGACPK_00639	2.24e-238	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AMAGACPK_00640	8.33e-27	-	-	-	-	-	-	-	-
AMAGACPK_00641	3.54e-230	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
AMAGACPK_00642	4.04e-203	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
AMAGACPK_00643	3.31e-239	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
AMAGACPK_00644	3.42e-232	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
AMAGACPK_00645	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
AMAGACPK_00646	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
AMAGACPK_00647	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
AMAGACPK_00648	1.55e-117	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
AMAGACPK_00649	2.44e-211	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
AMAGACPK_00650	2.78e-251	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
AMAGACPK_00651	8.59e-221	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
AMAGACPK_00652	1.16e-128	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
AMAGACPK_00653	1.15e-180	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_00654	0.0	-	-	-	S	-	-	-	SH3-like domain
AMAGACPK_00655	3.16e-144	ybbL	-	-	S	ko:K02068	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
AMAGACPK_00656	4.76e-168	ybbM	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
AMAGACPK_00657	6.24e-210	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_00658	4.64e-63	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
AMAGACPK_00659	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
AMAGACPK_00660	7.65e-101	-	-	-	K	-	-	-	MerR HTH family regulatory protein
AMAGACPK_00661	1.43e-178	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
AMAGACPK_00662	0.0	ycaM	-	-	E	-	-	-	amino acid
AMAGACPK_00663	1.67e-203	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMAGACPK_00664	3.47e-285	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_00665	0.0	-	-	-	-	-	-	-	-
AMAGACPK_00667	9.53e-241	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	Putative sugar-binding domain
AMAGACPK_00668	2.86e-244	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
AMAGACPK_00669	2.86e-286	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
AMAGACPK_00670	5.46e-183	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
AMAGACPK_00671	1.18e-253	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
AMAGACPK_00672	3.07e-124	-	-	-	-	-	-	-	-
AMAGACPK_00673	2.81e-200	ycsE	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
AMAGACPK_00674	1.64e-174	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
AMAGACPK_00675	1.1e-232	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
AMAGACPK_00676	4.82e-113	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
AMAGACPK_00677	1.51e-127	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
AMAGACPK_00678	2.84e-208	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
AMAGACPK_00679	1.25e-263	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
AMAGACPK_00680	8.77e-173	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
AMAGACPK_00681	3.69e-170	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
AMAGACPK_00682	3.46e-266	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
AMAGACPK_00683	2.13e-194	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
AMAGACPK_00684	2.76e-221	ybbR	-	-	S	-	-	-	YbbR-like protein
AMAGACPK_00685	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AMAGACPK_00686	8.04e-190	-	-	-	S	-	-	-	hydrolase
AMAGACPK_00687	3.23e-98	copY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Penicillinase repressor
AMAGACPK_00688	2.85e-153	-	-	-	-	-	-	-	-
AMAGACPK_00689	3.07e-112	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AMAGACPK_00690	2.52e-262	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
AMAGACPK_00691	8.39e-195	bglG5	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
AMAGACPK_00692	0.0	pts33BCA	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
AMAGACPK_00693	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
AMAGACPK_00694	8.48e-198	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
AMAGACPK_00695	6.91e-118	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
AMAGACPK_00696	2.21e-34	-	4.1.2.50, 4.2.3.12	-	H	ko:K01737	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000,ko03016	6-pyruvoyl tetrahydropterin synthase
AMAGACPK_00697	1.67e-136	icaA	-	-	M	-	-	-	Glycosyl transferase family group 2
AMAGACPK_00698	2.64e-46	-	-	-	-	-	-	-	-
AMAGACPK_00699	4.11e-110	-	2.7.7.65	-	T	ko:K02488	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko00002,ko01000,ko02022	GGDEF domain
AMAGACPK_00700	1.67e-203	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMAGACPK_00701	1.14e-99	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AMAGACPK_00703	0.0	-	-	-	E	-	-	-	Amino acid permease
AMAGACPK_00704	2.15e-127	-	-	-	L	-	-	-	Helix-turn-helix domain
AMAGACPK_00705	1.23e-203	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
AMAGACPK_00707	3.96e-37	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AMAGACPK_00708	1.49e-130	ylbE	-	-	GM	-	-	-	NAD(P)H-binding
AMAGACPK_00709	2.33e-120	-	-	-	S	-	-	-	VanZ like family
AMAGACPK_00710	5.65e-171	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
AMAGACPK_00711	5.04e-231	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
AMAGACPK_00712	1.72e-222	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
AMAGACPK_00713	7.88e-63	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	competence protein ComGC
AMAGACPK_00714	8.19e-91	-	-	-	-	ko:K02246	-	ko00000,ko00002,ko02044	-
AMAGACPK_00715	1.68e-55	-	-	-	-	-	-	-	-
AMAGACPK_00716	5.55e-100	-	-	-	U	ko:K02248	-	ko00000,ko00002,ko02044	Putative Competence protein ComGF
AMAGACPK_00717	3.69e-30	-	-	-	-	-	-	-	-
AMAGACPK_00718	2.42e-238	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
AMAGACPK_00719	1.07e-281	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AMAGACPK_00721	3e-128	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
AMAGACPK_00722	1.72e-288	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
AMAGACPK_00723	1.93e-242	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
AMAGACPK_00724	2.59e-89	-	-	-	S	-	-	-	SdpI/YhfL protein family
AMAGACPK_00725	2.3e-169	-	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
AMAGACPK_00726	0.0	yclK	-	-	T	-	-	-	Histidine kinase
AMAGACPK_00727	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
AMAGACPK_00728	5.3e-137	vanZ	-	-	V	-	-	-	VanZ like family
AMAGACPK_00729	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
AMAGACPK_00730	3.26e-274	-	-	-	EGP	-	-	-	Major Facilitator
AMAGACPK_00731	2.68e-274	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_00732	7.95e-250	ampC	-	-	V	-	-	-	Beta-lactamase
AMAGACPK_00735	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Domain of unknown function (DUF1727)
AMAGACPK_00736	7.02e-146	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
AMAGACPK_00737	6.6e-237	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
AMAGACPK_00738	1.24e-198	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
AMAGACPK_00739	1.66e-243	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
AMAGACPK_00740	5.28e-146	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
AMAGACPK_00741	5.87e-166	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
AMAGACPK_00742	4.83e-37	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AMAGACPK_00743	2.48e-83	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
AMAGACPK_00744	6.55e-120	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AMAGACPK_00745	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
AMAGACPK_00746	1.48e-221	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
AMAGACPK_00747	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
AMAGACPK_00748	2.45e-93	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
AMAGACPK_00749	2.54e-42	-	-	-	S	-	-	-	Protein of unknown function (DUF1146)
AMAGACPK_00750	4.81e-227	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
AMAGACPK_00751	1.59e-68	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
AMAGACPK_00752	5.13e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
AMAGACPK_00753	1.18e-275	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
AMAGACPK_00754	9.45e-104	uspA	-	-	T	-	-	-	universal stress protein
AMAGACPK_00755	1.35e-56	-	-	-	-	-	-	-	-
AMAGACPK_00756	1.47e-302	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
AMAGACPK_00757	8.08e-110	-	-	-	S	-	-	-	Protein of unknown function (DUF1694)
AMAGACPK_00758	3.07e-142	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
AMAGACPK_00759	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
AMAGACPK_00760	3.52e-272	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
AMAGACPK_00761	3.48e-288	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AMAGACPK_00762	2.1e-232	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
AMAGACPK_00763	6.01e-153	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
AMAGACPK_00764	3.97e-57	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
AMAGACPK_00765	8.7e-86	-	-	-	S	-	-	-	GtrA-like protein
AMAGACPK_00766	4.08e-218	yfdH	-	GT2	M	ko:K12999	-	ko00000,ko01000,ko01003,ko01005	Glycosyltransferase, group 2 family protein
AMAGACPK_00767	3.33e-123	-	-	-	S	-	-	-	Protein of unknown function (DUF3990)
AMAGACPK_00768	8.53e-59	-	-	-	-	-	-	-	-
AMAGACPK_00769	9.25e-13	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
AMAGACPK_00770	0.0	yoaB	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
AMAGACPK_00771	3.02e-166	-	-	-	S	ko:K06926	-	ko00000	AAA domain, putative AbiEii toxin, Type IV TA system
AMAGACPK_00772	2.91e-67	-	-	-	-	-	-	-	-
AMAGACPK_00773	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
AMAGACPK_00774	1.22e-306	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
AMAGACPK_00775	1.06e-162	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
AMAGACPK_00776	6.18e-150	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
AMAGACPK_00777	8.26e-226	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
AMAGACPK_00778	8.27e-189	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
AMAGACPK_00779	5.43e-122	mreD	-	-	-	ko:K03571	-	ko00000,ko03036	-
AMAGACPK_00780	1.4e-09	-	-	-	S	-	-	-	Protein of unknown function (DUF4044)
AMAGACPK_00781	1.02e-72	-	-	-	S	-	-	-	Protein of unknown function (DUF3397)
AMAGACPK_00782	5.63e-102	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
AMAGACPK_00783	1.49e-223	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
AMAGACPK_00784	6.55e-72	ftsL	-	-	D	-	-	-	Cell division protein FtsL
AMAGACPK_00785	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
AMAGACPK_00786	4.43e-224	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AMAGACPK_00787	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AMAGACPK_00788	3.88e-264	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AMAGACPK_00789	3.14e-194	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
AMAGACPK_00790	3.3e-315	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
AMAGACPK_00791	2.52e-300	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AMAGACPK_00792	1.43e-96	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
AMAGACPK_00793	2.42e-60	yggT	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
AMAGACPK_00794	0.0	-	-	-	L	-	-	-	Transposase
AMAGACPK_00795	6.3e-138	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
AMAGACPK_00796	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AMAGACPK_00797	2.32e-43	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
AMAGACPK_00798	5.18e-134	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
AMAGACPK_00799	1.22e-55	-	-	-	-	-	-	-	-
AMAGACPK_00800	2.05e-163	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AMAGACPK_00801	1.62e-276	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
AMAGACPK_00802	9.98e-75	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
AMAGACPK_00803	4.47e-278	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
AMAGACPK_00804	4.7e-163	pgm	-	-	G	-	-	-	Phosphoglycerate mutase family
AMAGACPK_00805	2.31e-148	-	-	-	S	-	-	-	repeat protein
AMAGACPK_00806	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
AMAGACPK_00807	0.0	-	-	-	L	-	-	-	Nuclease-related domain
AMAGACPK_00808	1.75e-211	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
AMAGACPK_00809	1.18e-82	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_00810	4.23e-46	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_00811	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AMAGACPK_00812	5.22e-45	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
AMAGACPK_00813	2.79e-131	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
AMAGACPK_00814	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
AMAGACPK_00815	3.91e-268	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
AMAGACPK_00816	9.94e-71	ylbG	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2129)
AMAGACPK_00817	5.21e-126	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
AMAGACPK_00818	7.07e-107	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
AMAGACPK_00819	1.42e-244	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
AMAGACPK_00820	2.7e-126	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
AMAGACPK_00821	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
AMAGACPK_00822	2.57e-226	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
AMAGACPK_00823	3.64e-46	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
AMAGACPK_00824	7.11e-57	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
AMAGACPK_00825	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AMAGACPK_00826	5.43e-191	-	-	-	-	-	-	-	-
AMAGACPK_00827	5.76e-287	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AMAGACPK_00828	2.56e-291	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
AMAGACPK_00829	3.04e-297	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AMAGACPK_00830	1.59e-136	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
AMAGACPK_00831	2.58e-48	potE	-	-	E	-	-	-	Amino Acid
AMAGACPK_00832	1.27e-220	potE	-	-	E	-	-	-	Amino Acid
AMAGACPK_00833	6.25e-246	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
AMAGACPK_00834	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
AMAGACPK_00835	1.39e-312	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
AMAGACPK_00836	8.62e-105	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
AMAGACPK_00837	3.29e-280	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
AMAGACPK_00838	3.66e-225	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AMAGACPK_00839	6.89e-185	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
AMAGACPK_00840	9.03e-277	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
AMAGACPK_00841	2.48e-252	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AMAGACPK_00842	5.26e-242	pbpX1	-	-	V	-	-	-	Beta-lactamase
AMAGACPK_00843	0.0	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
AMAGACPK_00844	1.09e-217	-	-	-	L	-	-	-	Bifunctional protein
AMAGACPK_00845	2.73e-260	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
AMAGACPK_00846	1.83e-54	-	-	-	C	-	-	-	FMN_bind
AMAGACPK_00847	4.49e-108	-	-	-	-	-	-	-	-
AMAGACPK_00848	3.14e-226	iunH	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	inosine-uridine preferring nucleoside hydrolase
AMAGACPK_00849	2.06e-111	alkD	-	-	L	-	-	-	DNA alkylation repair enzyme
AMAGACPK_00850	0.0	pbg4	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
AMAGACPK_00851	4.65e-166	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA domain
AMAGACPK_00852	2.19e-73	pts20B	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
AMAGACPK_00853	7.88e-79	celC	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose Cellobiose specific IIA subunit
AMAGACPK_00854	5.44e-284	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_00855	1.33e-92	-	-	-	-	-	-	-	-
AMAGACPK_00856	4.06e-88	celD	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AMAGACPK_00857	8.5e-208	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_00858	1.64e-215	celD	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AMAGACPK_00859	2.73e-92	-	-	-	S	-	-	-	Domain of unknown function (DUF3284)
AMAGACPK_00860	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
AMAGACPK_00861	1.55e-167	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA
AMAGACPK_00862	5.44e-284	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_00863	2.43e-55	-	-	-	-	-	-	-	-
AMAGACPK_00864	4.81e-253	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
AMAGACPK_00865	2.7e-298	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
AMAGACPK_00866	4.02e-288	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
AMAGACPK_00867	4.05e-242	-	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding protein-like domain
AMAGACPK_00868	5.55e-137	-	-	-	K	-	-	-	Transcriptional regulator, AbiEi antitoxin
AMAGACPK_00869	2.44e-210	-	-	-	S	-	-	-	Nucleotidyl transferase AbiEii toxin, Type IV TA system
AMAGACPK_00870	2.84e-240	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
AMAGACPK_00871	5.37e-179	lacM	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
AMAGACPK_00872	2.22e-98	lacL	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
AMAGACPK_00873	4.06e-277	lacL	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
AMAGACPK_00874	6.03e-210	lacR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
AMAGACPK_00875	3.77e-260	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
AMAGACPK_00876	4.09e-127	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
AMAGACPK_00877	0.0	lacZ	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	-beta-galactosidase
AMAGACPK_00878	3.56e-281	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
AMAGACPK_00879	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
AMAGACPK_00880	1.6e-251	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
AMAGACPK_00881	3.47e-285	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_00882	2.14e-48	-	-	-	-	-	-	-	-
AMAGACPK_00883	1.14e-208	-	-	-	K	ko:K03484	-	ko00000,ko03000	Periplasmic binding protein domain
AMAGACPK_00884	5.69e-179	msmE	-	-	G	ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
AMAGACPK_00885	6.71e-283	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_00886	1.19e-128	-	-	-	T	-	-	-	Region found in RelA / SpoT proteins
AMAGACPK_00887	1.52e-135	dltr	-	-	K	-	-	-	response regulator
AMAGACPK_00888	2.05e-146	sptS	-	-	T	-	-	-	Histidine kinase
AMAGACPK_00889	2.27e-132	sptS	-	-	T	-	-	-	Histidine kinase
AMAGACPK_00890	6.74e-267	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
AMAGACPK_00891	3.91e-91	-	-	-	O	-	-	-	OsmC-like protein
AMAGACPK_00892	3.72e-111	yhaH	-	-	S	-	-	-	Protein of unknown function (DUF805)
AMAGACPK_00893	5.06e-111	-	-	-	-	-	-	-	-
AMAGACPK_00894	8.22e-117	-	-	-	-	-	-	-	-
AMAGACPK_00895	1.66e-227	-	-	-	-	-	-	-	-
AMAGACPK_00896	2.65e-107	-	-	-	S	-	-	-	Fic/DOC family
AMAGACPK_00897	0.0	potE	-	-	E	-	-	-	Amino Acid
AMAGACPK_00898	2.44e-285	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AMAGACPK_00899	5.75e-284	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_00900	1.43e-309	lctO	1.13.12.4	-	C	ko:K00467,ko:K10530	ko00620,map00620	ko00000,ko00001,ko01000	L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
AMAGACPK_00901	7.68e-63	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
AMAGACPK_00902	5.01e-150	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
AMAGACPK_00903	6.51e-69	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
AMAGACPK_00904	7.73e-199	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
AMAGACPK_00905	9.46e-159	-	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
AMAGACPK_00906	1.87e-58	-	-	-	-	-	-	-	-
AMAGACPK_00907	0.0	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
AMAGACPK_00908	6.38e-154	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_00909	3.86e-109	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_00910	8.86e-210	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_00911	0.0	pulA	3.2.1.41	CBM48,GH13	G	ko:K01200	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko01000	belongs to the glycosyl hydrolase 13 family
AMAGACPK_00912	4.14e-113	-	-	-	K	ko:K03484	-	ko00000,ko03000	Periplasmic binding protein domain
AMAGACPK_00913	1.17e-122	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_00914	1.82e-69	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_00915	5.32e-42	-	-	-	-	ko:K18829	-	ko00000,ko02048	-
AMAGACPK_00916	4.02e-91	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	Toxin-antitoxin system, toxin component, MazF family
AMAGACPK_00917	9e-132	-	-	-	L	-	-	-	Integrase
AMAGACPK_00918	1.38e-195	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_00919	3.87e-73	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_00920	1.48e-136	-	-	-	L	-	-	-	PFAM Integrase catalytic
AMAGACPK_00921	2.28e-76	eriC	-	-	P	ko:K03281	-	ko00000	chloride
AMAGACPK_00922	2.4e-136	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_00923	2.26e-70	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_00924	1.04e-74	eriC	-	-	P	ko:K03281	-	ko00000	chloride
AMAGACPK_00925	1.45e-34	-	-	-	K	-	-	-	FCD
AMAGACPK_00926	5.06e-13	-	-	-	K	-	-	-	FCD
AMAGACPK_00927	1.6e-291	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_00928	4.37e-132	-	-	-	GM	-	-	-	NmrA-like family
AMAGACPK_00929	5.5e-154	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
AMAGACPK_00930	1.56e-164	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
AMAGACPK_00931	8.81e-212	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
AMAGACPK_00932	2.9e-122	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
AMAGACPK_00933	2.22e-231	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
AMAGACPK_00934	8.31e-313	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
AMAGACPK_00935	4.22e-269	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
AMAGACPK_00936	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
AMAGACPK_00937	0.0	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
AMAGACPK_00938	6.79e-190	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
AMAGACPK_00939	8.74e-62	-	-	-	-	-	-	-	-
AMAGACPK_00940	2.88e-105	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
AMAGACPK_00941	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
AMAGACPK_00942	6.78e-24	-	-	-	S	-	-	-	Alpha beta hydrolase
AMAGACPK_00943	2.48e-80	-	-	-	S	-	-	-	Alpha beta hydrolase
AMAGACPK_00944	8.51e-50	-	-	-	-	-	-	-	-
AMAGACPK_00945	4.3e-66	-	-	-	-	-	-	-	-
AMAGACPK_00946	1.14e-189	supH	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
AMAGACPK_00947	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
AMAGACPK_00948	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
AMAGACPK_00949	1.82e-86	yusI	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	Belongs to the ArsC family
AMAGACPK_00950	1.23e-227	lipA	-	-	I	-	-	-	Carboxylesterase family
AMAGACPK_00952	1.16e-269	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
AMAGACPK_00953	8.57e-202	cinI	-	-	S	ko:K06889	-	ko00000	Serine hydrolase (FSH1)
AMAGACPK_00954	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2207)
AMAGACPK_00955	2.07e-38	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
AMAGACPK_00957	0.0	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
AMAGACPK_00958	5.24e-194	-	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AMAGACPK_00959	6.82e-66	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
AMAGACPK_00960	7.95e-64	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
AMAGACPK_00961	2.14e-257	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
AMAGACPK_00962	2.11e-133	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AMAGACPK_00963	7.98e-93	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
AMAGACPK_00964	2.78e-85	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AMAGACPK_00965	7.19e-199	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
AMAGACPK_00966	1.97e-248	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
AMAGACPK_00967	1.53e-47	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
AMAGACPK_00968	6.44e-205	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
AMAGACPK_00969	7.22e-197	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
AMAGACPK_00970	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
AMAGACPK_00971	2.19e-100	-	-	-	S	-	-	-	ASCH
AMAGACPK_00972	5.97e-145	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
AMAGACPK_00973	2.37e-46	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
AMAGACPK_00974	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AMAGACPK_00975	1.27e-219	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AMAGACPK_00976	7.82e-311	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AMAGACPK_00977	3.28e-179	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
AMAGACPK_00978	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
AMAGACPK_00979	1.71e-208	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
AMAGACPK_00980	7.49e-154	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
AMAGACPK_00981	4.49e-159	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
AMAGACPK_00982	2.29e-41	-	-	-	-	-	-	-	-
AMAGACPK_00983	8.76e-146	int3	-	-	L	-	-	-	Belongs to the 'phage' integrase family
AMAGACPK_00986	2.15e-09	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
AMAGACPK_00987	2.69e-25	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
AMAGACPK_00988	1.23e-101	-	-	-	S	-	-	-	Phage antirepressor protein KilAC domain
AMAGACPK_00989	5.99e-61	-	-	-	-	-	-	-	-
AMAGACPK_00995	8.83e-88	-	-	-	S	-	-	-	AAA domain
AMAGACPK_00997	1.52e-182	-	-	-	L	-	-	-	Helicase C-terminal domain protein
AMAGACPK_00998	4.62e-25	-	-	-	S	-	-	-	Protein of unknown function (DUF669)
AMAGACPK_00999	0.0	-	-	-	S	ko:K06919	-	ko00000	Phage plasmid primase, P4
AMAGACPK_01010	3.85e-49	-	-	-	S	-	-	-	VRR_NUC
AMAGACPK_01015	1.34e-62	-	-	-	L	-	-	-	HNH nucleases
AMAGACPK_01016	1.2e-71	-	-	-	L	-	-	-	Phage terminase, small subunit
AMAGACPK_01017	6.84e-10	-	-	-	S	-	-	-	HicA toxin of bacterial toxin-antitoxin,
AMAGACPK_01018	1.57e-61	-	-	-	S	-	-	-	HicB_like antitoxin of bacterial toxin-antitoxin system
AMAGACPK_01019	1.82e-260	-	-	-	S	-	-	-	Phage Terminase
AMAGACPK_01021	1.11e-169	-	-	-	S	-	-	-	Phage portal protein
AMAGACPK_01022	4.37e-110	-	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S14 family
AMAGACPK_01023	5.87e-67	-	-	-	S	-	-	-	Phage capsid family
AMAGACPK_01031	2.66e-131	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
AMAGACPK_01033	5.6e-158	-	-	-	S	-	-	-	Phage minor structural protein
AMAGACPK_01041	6.5e-51	-	-	-	S	-	-	-	Bacteriophage holin of superfamily 6 (Holin_LLH)
AMAGACPK_01042	8.02e-127	-	-	-	M	-	-	-	hydrolase, family 25
AMAGACPK_01044	0.0	-	-	-	L	-	-	-	Transposase
AMAGACPK_01045	1.33e-35	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
AMAGACPK_01046	8.29e-75	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
AMAGACPK_01047	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
AMAGACPK_01048	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AMAGACPK_01049	3.69e-233	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
AMAGACPK_01050	7.32e-46	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AMAGACPK_01051	1.21e-245	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
AMAGACPK_01052	3.27e-229	oppF	-	-	P	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
AMAGACPK_01053	7.92e-221	oppB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
AMAGACPK_01054	3.74e-182	oppC5	-	-	P	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
AMAGACPK_01055	3.35e-55	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
AMAGACPK_01056	1.06e-247	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMAGACPK_01057	2.46e-302	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
AMAGACPK_01058	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
AMAGACPK_01059	2.8e-160	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
AMAGACPK_01060	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
AMAGACPK_01061	4.69e-226	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
AMAGACPK_01062	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
AMAGACPK_01063	1.69e-06	-	-	-	-	-	-	-	-
AMAGACPK_01064	2.1e-31	-	-	-	-	-	-	-	-
AMAGACPK_01065	5.41e-172	cysA	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
AMAGACPK_01066	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
AMAGACPK_01067	0.0	ctrA	-	-	E	ko:K03294	-	ko00000	amino acid
AMAGACPK_01068	5.56e-72	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
AMAGACPK_01069	1.34e-289	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AMAGACPK_01070	6.78e-60	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
AMAGACPK_01071	2.08e-122	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AMAGACPK_01072	1.63e-173	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
AMAGACPK_01073	1.64e-74	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
AMAGACPK_01074	4.96e-270	-	-	-	S	-	-	-	SLAP domain
AMAGACPK_01075	1.15e-154	ung2	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil-DNA glycosylase
AMAGACPK_01076	7.18e-187	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
AMAGACPK_01077	0.0	-	-	-	L	-	-	-	Transposase
AMAGACPK_01078	9.86e-146	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AMAGACPK_01079	4.16e-51	ynzC	-	-	S	-	-	-	UPF0291 protein
AMAGACPK_01080	1.3e-40	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
AMAGACPK_01081	9.44e-158	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
AMAGACPK_01082	5.82e-226	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
AMAGACPK_01083	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
AMAGACPK_01084	5.43e-131	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
AMAGACPK_01085	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
AMAGACPK_01086	8.61e-296	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
AMAGACPK_01087	1.65e-151	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
AMAGACPK_01088	2.03e-251	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
AMAGACPK_01089	2.21e-180	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
AMAGACPK_01090	1.76e-235	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
AMAGACPK_01091	5.86e-168	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
AMAGACPK_01092	1.22e-121	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
AMAGACPK_01093	6.38e-178	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AMAGACPK_01094	3.93e-181	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
AMAGACPK_01095	6.38e-254	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
AMAGACPK_01096	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
AMAGACPK_01097	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AMAGACPK_01098	3.4e-108	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
AMAGACPK_01099	1.19e-259	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
AMAGACPK_01100	3.75e-63	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
AMAGACPK_01101	1.61e-64	ylxQ	-	-	J	-	-	-	ribosomal protein
AMAGACPK_01102	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
AMAGACPK_01103	1.67e-79	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
AMAGACPK_01104	1.64e-198	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AMAGACPK_01105	5.35e-223	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
AMAGACPK_01106	6.02e-247	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
AMAGACPK_01107	3.74e-109	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
AMAGACPK_01108	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
AMAGACPK_01109	6.87e-277	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
AMAGACPK_01110	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
AMAGACPK_01111	1.09e-226	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
AMAGACPK_01116	1.5e-57	-	-	-	K	-	-	-	Peptidase S24-like
AMAGACPK_01117	3.96e-06	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
AMAGACPK_01120	7.64e-21	-	-	-	-	-	-	-	-
AMAGACPK_01121	1.45e-123	-	-	-	S	-	-	-	AntA/AntB antirepressor
AMAGACPK_01127	2.36e-08	-	-	-	K	-	-	-	DNA-binding protein
AMAGACPK_01131	5.94e-73	-	-	-	S	-	-	-	Protein of unknown function (DUF1071)
AMAGACPK_01132	2.55e-40	-	-	-	S	-	-	-	Conserved phage C-terminus (Phg_2220_C)
AMAGACPK_01133	6.3e-64	-	-	-	L	ko:K02315	-	ko00000,ko03032	IstB-like ATP binding protein
AMAGACPK_01139	5.99e-52	-	-	-	L	-	-	-	Endodeoxyribonuclease RusA
AMAGACPK_01140	1.08e-10	-	-	-	-	-	-	-	-
AMAGACPK_01149	1.42e-23	-	-	-	-	-	-	-	-
AMAGACPK_01150	3.69e-43	-	-	-	V	-	-	-	NUMOD4 motif
AMAGACPK_01151	1.18e-82	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_01152	4.23e-46	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_01153	1.07e-26	-	-	-	-	-	-	-	-
AMAGACPK_01154	2.64e-277	-	-	-	S	-	-	-	Terminase-like family
AMAGACPK_01155	1.14e-176	-	-	-	S	ko:K09961	-	ko00000	Protein of unknown function (DUF1073)
AMAGACPK_01156	3.22e-124	-	-	-	S	-	-	-	Phage Mu protein F like protein
AMAGACPK_01157	1.14e-16	-	-	-	S	-	-	-	Lysin motif
AMAGACPK_01158	1.12e-136	-	-	-	S	ko:K09960	-	ko00000	Uncharacterized protein conserved in bacteria (DUF2213)
AMAGACPK_01159	1.25e-75	-	-	-	-	-	-	-	-
AMAGACPK_01160	1.29e-181	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2184)
AMAGACPK_01162	5.11e-95	-	-	-	-	-	-	-	-
AMAGACPK_01163	5.73e-56	-	-	-	-	-	-	-	-
AMAGACPK_01164	5.61e-69	-	-	-	-	-	-	-	-
AMAGACPK_01165	3.19e-193	-	-	-	S	-	-	-	Protein of unknown function (DUF3383)
AMAGACPK_01166	1.33e-73	-	-	-	-	-	-	-	-
AMAGACPK_01169	0.0	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
AMAGACPK_01170	1.06e-69	-	-	-	M	-	-	-	LysM domain
AMAGACPK_01171	6.91e-61	-	-	-	-	-	-	-	-
AMAGACPK_01172	1.11e-128	-	-	-	-	-	-	-	-
AMAGACPK_01173	4.6e-63	-	-	-	-	-	-	-	-
AMAGACPK_01174	1.94e-42	-	-	-	-	-	-	-	-
AMAGACPK_01175	2.78e-156	-	-	-	S	-	-	-	Baseplate J-like protein
AMAGACPK_01177	8.78e-42	-	-	-	-	-	-	-	-
AMAGACPK_01183	1.28e-54	-	-	-	-	-	-	-	-
AMAGACPK_01184	2.12e-27	-	-	-	S	-	-	-	Phage uncharacterised protein (Phage_XkdX)
AMAGACPK_01187	6.31e-27	-	-	-	-	-	-	-	-
AMAGACPK_01188	1.24e-38	-	-	-	-	-	-	-	-
AMAGACPK_01189	3.36e-224	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
AMAGACPK_01190	2.26e-244	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_01191	3.43e-11	-	-	-	T	ko:K07172	-	ko00000,ko02048	SpoVT / AbrB like domain
AMAGACPK_01192	3.3e-16	-	-	-	T	-	-	-	PemK-like, MazF-like toxin of type II toxin-antitoxin system
AMAGACPK_01193	5.3e-32	-	-	-	-	-	-	-	-
AMAGACPK_01194	9.71e-47	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
AMAGACPK_01195	7e-131	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
AMAGACPK_01196	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
AMAGACPK_01197	1.15e-121	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AMAGACPK_01198	5.6e-291	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
AMAGACPK_01199	4.39e-268	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
AMAGACPK_01201	5.01e-55	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
AMAGACPK_01202	5.75e-284	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01203	4.97e-64	-	-	-	S	-	-	-	Metal binding domain of Ada
AMAGACPK_01204	0.0	-	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
AMAGACPK_01205	3.03e-177	lysR5	-	-	K	-	-	-	LysR substrate binding domain
AMAGACPK_01206	2.06e-298	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
AMAGACPK_01207	5.39e-84	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AMAGACPK_01208	2.01e-135	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
AMAGACPK_01209	1.76e-122	citX	2.7.7.61	-	HI	ko:K05964	ko02020,map02020	ko00000,ko00001,ko01000	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
AMAGACPK_01210	1.07e-287	-	-	-	S	-	-	-	Sterol carrier protein domain
AMAGACPK_01211	4.04e-29	-	-	-	-	-	-	-	-
AMAGACPK_01212	6.93e-140	-	-	-	K	-	-	-	LysR substrate binding domain
AMAGACPK_01213	1.13e-126	-	-	-	-	-	-	-	-
AMAGACPK_01214	5.04e-154	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
AMAGACPK_01215	3.47e-285	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01216	5.73e-153	-	-	-	-	-	-	-	-
AMAGACPK_01217	9.77e-277	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01218	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
AMAGACPK_01219	1.15e-64	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
AMAGACPK_01220	7.49e-281	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01221	5.51e-35	-	-	-	-	-	-	-	-
AMAGACPK_01222	8.71e-31	-	-	-	G	-	-	-	Ribose/Galactose Isomerase
AMAGACPK_01223	6.13e-70	-	-	-	K	-	-	-	sequence-specific DNA binding
AMAGACPK_01224	1.83e-52	-	-	-	S	-	-	-	SnoaL-like domain
AMAGACPK_01226	9.95e-285	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01227	0.0	-	-	-	L	-	-	-	PLD-like domain
AMAGACPK_01228	3.76e-290	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01229	6.83e-133	yrgI	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Histidine phosphatase superfamily (branch 1)
AMAGACPK_01230	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
AMAGACPK_01231	0.0	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase
AMAGACPK_01232	2.95e-283	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
AMAGACPK_01233	3.06e-202	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
AMAGACPK_01234	5.47e-151	-	-	-	-	-	-	-	-
AMAGACPK_01235	2.83e-205	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AMAGACPK_01237	1.22e-136	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AMAGACPK_01238	2e-149	-	-	-	S	-	-	-	Peptidase family M23
AMAGACPK_01239	8.15e-285	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01240	0.0	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
AMAGACPK_01241	0.0	-	-	-	L	-	-	-	Transposase
AMAGACPK_01242	1.5e-93	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
AMAGACPK_01243	2.47e-104	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
AMAGACPK_01244	1.44e-164	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
AMAGACPK_01245	1.39e-53	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
AMAGACPK_01246	9.07e-51	-	-	-	S	-	-	-	CRISPR-associated protein (Cas_Csn2)
AMAGACPK_01247	2.15e-280	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01248	1.34e-22	-	-	-	S	-	-	-	CRISPR-associated protein (Cas_Csn2)
AMAGACPK_01249	6.94e-199	yqfL	2.7.11.33, 2.7.4.28	-	F	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
AMAGACPK_01250	4.83e-30	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
AMAGACPK_01251	1.08e-92	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
AMAGACPK_01252	1.74e-224	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
AMAGACPK_01253	3.58e-129	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
AMAGACPK_01254	1.37e-216	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
AMAGACPK_01255	4.11e-173	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
AMAGACPK_01256	9.03e-229	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
AMAGACPK_01257	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
AMAGACPK_01258	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
AMAGACPK_01259	9e-255	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
AMAGACPK_01260	0.0	-	-	-	L	-	-	-	Transposase
AMAGACPK_01261	4.34e-166	-	-	-	S	-	-	-	Peptidase family M23
AMAGACPK_01262	5.37e-106	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
AMAGACPK_01263	2.8e-159	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
AMAGACPK_01264	8.12e-196	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AMAGACPK_01265	2.86e-307	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
AMAGACPK_01266	1.25e-80	lexA	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator, GntR family
AMAGACPK_01267	1.55e-160	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
AMAGACPK_01268	1.65e-180	-	-	-	-	-	-	-	-
AMAGACPK_01269	2.54e-176	-	-	-	-	-	-	-	-
AMAGACPK_01270	3.85e-193	-	-	-	-	-	-	-	-
AMAGACPK_01271	0.0	-	-	-	L	-	-	-	Transposase
AMAGACPK_01272	3.49e-36	-	-	-	-	-	-	-	-
AMAGACPK_01273	1.27e-133	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
AMAGACPK_01274	4.01e-184	-	-	-	-	-	-	-	-
AMAGACPK_01275	4.4e-215	-	-	-	-	-	-	-	-
AMAGACPK_01276	2.14e-170	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
AMAGACPK_01277	6.24e-210	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_01278	1.79e-127	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
AMAGACPK_01279	1.28e-150	-	3.1.3.102, 3.1.3.104, 3.1.3.23	-	G	ko:K07757,ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sucrose-6F-phosphate phosphohydrolase
AMAGACPK_01280	4.87e-236	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
AMAGACPK_01281	6.67e-261	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
AMAGACPK_01282	5.87e-228	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
AMAGACPK_01283	3.02e-173	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	GHMP kinases N terminal domain
AMAGACPK_01284	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
AMAGACPK_01285	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
AMAGACPK_01286	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
AMAGACPK_01287	9.62e-116	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
AMAGACPK_01288	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
AMAGACPK_01289	6.91e-149	dnaD	-	-	L	ko:K02086	-	ko00000	DnaD domain protein
AMAGACPK_01290	5.5e-148	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AMAGACPK_01291	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
AMAGACPK_01292	3.1e-121	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
AMAGACPK_01293	1.18e-139	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
AMAGACPK_01294	1.85e-90	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
AMAGACPK_01295	1.68e-277	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
AMAGACPK_01296	3.51e-232	cpdA	-	-	S	-	-	-	Calcineurin-like phosphoesterase
AMAGACPK_01297	1.15e-180	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_01298	2.18e-51	cpdA	-	-	S	-	-	-	Calcineurin-like phosphoesterase
AMAGACPK_01299	9.67e-104	-	-	-	-	-	-	-	-
AMAGACPK_01300	4.65e-219	-	-	-	L	-	-	-	Bifunctional protein
AMAGACPK_01301	9.91e-150	-	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Ham1 family
AMAGACPK_01302	3.47e-285	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01303	3.56e-47	-	-	-	-	-	-	-	-
AMAGACPK_01304	4.13e-83	-	-	-	-	-	-	-	-
AMAGACPK_01307	1.51e-159	-	-	-	-	-	-	-	-
AMAGACPK_01308	4.83e-136	pncA	-	-	Q	-	-	-	Isochorismatase family
AMAGACPK_01309	1.24e-08	-	-	-	-	-	-	-	-
AMAGACPK_01310	1.73e-48	-	-	-	-	-	-	-	-
AMAGACPK_01311	0.0	snf	-	-	KL	-	-	-	domain protein
AMAGACPK_01312	1.47e-208	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_01313	0.0	-	-	-	L	-	-	-	Transposase
AMAGACPK_01314	9.39e-141	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
AMAGACPK_01315	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
AMAGACPK_01316	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
AMAGACPK_01317	1.11e-234	-	-	-	K	-	-	-	Transcriptional regulator
AMAGACPK_01318	1.05e-221	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
AMAGACPK_01319	1.17e-144	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AMAGACPK_01320	5.03e-76	-	-	-	K	-	-	-	Helix-turn-helix domain
AMAGACPK_01321	3.47e-285	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01322	4.52e-114	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
AMAGACPK_01323	5.57e-22	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
AMAGACPK_01324	3.47e-285	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01325	8.73e-53	-	-	-	S	-	-	-	Transglycosylase associated protein
AMAGACPK_01326	3.47e-285	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01327	3.35e-269	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
AMAGACPK_01328	4.36e-142	XK27_00160	-	-	S	-	-	-	Domain of unknown function (DUF5052)
AMAGACPK_01329	1.5e-90	-	-	-	-	-	-	-	-
AMAGACPK_01330	1.24e-258	xerS	-	-	L	ko:K03733	-	ko00000,ko03036	Belongs to the 'phage' integrase family
AMAGACPK_01331	0.0	mutS1	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
AMAGACPK_01332	1.59e-225	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01333	1.76e-30	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01334	1.15e-204	-	-	-	S	-	-	-	EDD domain protein, DegV family
AMAGACPK_01335	2.06e-88	-	-	-	-	-	-	-	-
AMAGACPK_01336	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
AMAGACPK_01337	0.0	carB1	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
AMAGACPK_01338	4.13e-255	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
AMAGACPK_01339	2.28e-221	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
AMAGACPK_01340	3.16e-102	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
AMAGACPK_01341	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
AMAGACPK_01342	1.61e-70	-	-	-	-	-	-	-	-
AMAGACPK_01344	8.81e-40	-	-	-	M	-	-	-	Mycoplasma protein of unknown function, DUF285
AMAGACPK_01345	9.86e-146	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
AMAGACPK_01346	3.39e-88	-	-	-	S	ko:K06915	-	ko00000	cog cog0433
AMAGACPK_01347	3.47e-285	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01349	4.81e-77	-	-	-	S	-	-	-	SIR2-like domain
AMAGACPK_01350	2.64e-49	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	HsdM N-terminal domain
AMAGACPK_01351	2.57e-61	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
AMAGACPK_01352	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
AMAGACPK_01353	5.22e-54	-	-	-	S	-	-	-	RloB-like protein
AMAGACPK_01354	1.35e-208	-	-	-	S	ko:K06926	-	ko00000	AAA domain, putative AbiEii toxin, Type IV TA system
AMAGACPK_01355	0.0	hsdR	3.1.21.3	-	L	ko:K01153	-	ko00000,ko01000,ko02048	DEAD/DEAH box helicase
AMAGACPK_01356	0.0	-	-	-	S	-	-	-	SLAP domain
AMAGACPK_01358	5.93e-302	XK27_01810	-	-	S	-	-	-	Calcineurin-like phosphoesterase
AMAGACPK_01359	1.43e-80	-	-	-	S	ko:K07006	-	ko00000	Pyridoxamine 5'-phosphate oxidase
AMAGACPK_01360	1.65e-303	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
AMAGACPK_01362	1.28e-168	-	-	-	L	-	-	-	PFAM transposase IS116 IS110 IS902
AMAGACPK_01363	0.0	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
AMAGACPK_01364	4.21e-129	treR	-	-	K	ko:K03486	-	ko00000,ko03000	UTRA
AMAGACPK_01365	0.0	treB	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
AMAGACPK_01366	1.12e-85	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
AMAGACPK_01367	6.84e-243	-	-	-	L	ko:K07478	-	ko00000	AAA C-terminal domain
AMAGACPK_01368	0.0	yqjE	3.4.11.14, 3.4.11.4	-	E	ko:K01258,ko:K01263	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
AMAGACPK_01369	5.74e-108	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
AMAGACPK_01370	1.87e-290	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
AMAGACPK_01371	7.89e-124	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
AMAGACPK_01372	3.1e-127	pdxK	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
AMAGACPK_01373	1.59e-259	pbpX1	-	-	V	-	-	-	Beta-lactamase
AMAGACPK_01374	1.12e-149	maa3	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
AMAGACPK_01375	1.12e-104	yvbK	-	-	K	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
AMAGACPK_01376	4.87e-262	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
AMAGACPK_01377	8.15e-285	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01378	5.94e-148	-	-	-	I	-	-	-	Acid phosphatase homologues
AMAGACPK_01379	2.25e-241	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
AMAGACPK_01380	0.0	uvrA2	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC, A subunit
AMAGACPK_01381	3.6e-106	-	-	-	C	-	-	-	Flavodoxin
AMAGACPK_01382	1.67e-203	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMAGACPK_01383	6.99e-207	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_01384	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
AMAGACPK_01385	7.37e-313	ynbB	-	-	P	-	-	-	aluminum resistance
AMAGACPK_01386	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
AMAGACPK_01387	0.0	-	-	-	E	-	-	-	Amino acid permease
AMAGACPK_01388	9.58e-122	-	-	-	C	-	-	-	Pyridoxamine 5'-phosphate oxidase
AMAGACPK_01389	9.95e-285	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01390	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
AMAGACPK_01391	5.29e-146	ybgF	-	-	E	ko:K02205,ko:K03293,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
AMAGACPK_01392	9.3e-16	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
AMAGACPK_01393	5.09e-85	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AMAGACPK_01394	9.28e-89	crcB1	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AMAGACPK_01395	5.49e-197	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
AMAGACPK_01396	5.61e-124	-	-	-	M	-	-	-	LysM domain protein
AMAGACPK_01397	6.38e-59	-	-	-	S	-	-	-	aldo-keto reductase (NADP) activity
AMAGACPK_01398	1.19e-97	-	-	-	C	-	-	-	Aldo keto reductase
AMAGACPK_01399	3.83e-231	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
AMAGACPK_01400	1.95e-291	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
AMAGACPK_01401	7.72e-311	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
AMAGACPK_01402	4.67e-116	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
AMAGACPK_01403	7.31e-181	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Phage integrase, N-terminal SAM-like domain
AMAGACPK_01404	1.42e-315	trmFO	2.1.1.74	-	J	ko:K04094	-	ko00000,ko01000,ko03016,ko03036	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
AMAGACPK_01405	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AMAGACPK_01406	1.23e-194	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
AMAGACPK_01407	1.73e-169	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AMAGACPK_01408	3.71e-199	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
AMAGACPK_01409	1.61e-204	nhaP4	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
AMAGACPK_01410	2.58e-88	-	-	-	P	-	-	-	NhaP-type Na H and K H
AMAGACPK_01411	9.85e-49	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
AMAGACPK_01412	8.63e-191	degV3	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
AMAGACPK_01413	1.8e-143	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
AMAGACPK_01414	5.13e-287	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
AMAGACPK_01415	4.7e-205	XK27_10395	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AMAGACPK_01416	2.75e-111	-	3.4.21.96	-	S	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	SLAP domain
AMAGACPK_01417	1.11e-41	yagE	-	-	E	-	-	-	Amino acid permease
AMAGACPK_01418	2.25e-125	yagE	-	-	E	-	-	-	Amino acid permease
AMAGACPK_01419	5.92e-191	-	2.3.1.81	-	V	ko:K00662	-	ko00000,ko01000,ko01504	Aminoglycoside 3-N-acetyltransferase
AMAGACPK_01420	4.87e-187	-	-	-	F	-	-	-	Phosphorylase superfamily
AMAGACPK_01421	6.97e-53	-	-	-	F	-	-	-	NUDIX domain
AMAGACPK_01422	2.14e-104	-	-	-	S	-	-	-	AAA domain
AMAGACPK_01423	9.95e-285	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01424	1.06e-247	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMAGACPK_01425	2.7e-116	yokL3	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
AMAGACPK_01426	8.3e-59	-	-	-	V	-	-	-	ABC transporter transmembrane region
AMAGACPK_01427	3.83e-284	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01428	9.41e-285	-	-	-	V	-	-	-	ABC transporter transmembrane region
AMAGACPK_01429	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AMAGACPK_01430	3.52e-293	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
AMAGACPK_01431	1.17e-56	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
AMAGACPK_01432	1.34e-314	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
AMAGACPK_01433	1.4e-281	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
AMAGACPK_01434	1.96e-148	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
AMAGACPK_01435	1.13e-41	-	-	-	M	-	-	-	Lysin motif
AMAGACPK_01436	8.49e-146	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
AMAGACPK_01437	1.89e-218	-	-	-	L	-	-	-	Bifunctional protein
AMAGACPK_01438	4.65e-168	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
AMAGACPK_01439	7.57e-135	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
AMAGACPK_01440	1.81e-169	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
AMAGACPK_01441	4.62e-81	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
AMAGACPK_01442	5.77e-214	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
AMAGACPK_01443	4.41e-216	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
AMAGACPK_01444	6.24e-210	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_01445	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
AMAGACPK_01446	5.46e-233	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
AMAGACPK_01447	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
AMAGACPK_01448	1.25e-38	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
AMAGACPK_01449	0.0	-	-	-	L	-	-	-	Transposase
AMAGACPK_01450	0.0	yfkN	3.1.3.6, 3.1.4.16	-	F	ko:K01119	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
AMAGACPK_01451	5.14e-38	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
AMAGACPK_01452	3.57e-47	-	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
AMAGACPK_01453	1.18e-183	-	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
AMAGACPK_01454	6.82e-223	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
AMAGACPK_01455	0.0	oatA	-	-	I	-	-	-	Acyltransferase
AMAGACPK_01456	1.88e-309	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
AMAGACPK_01457	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
AMAGACPK_01458	1.58e-140	yngC	-	-	S	-	-	-	SNARE associated Golgi protein
AMAGACPK_01459	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
AMAGACPK_01460	1.14e-230	gyaR	1.1.1.26, 1.1.1.399, 1.1.1.95	-	CH	ko:K00015,ko:K00058	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AMAGACPK_01461	1.83e-190	yxeH	-	-	S	-	-	-	hydrolase
AMAGACPK_01462	6.32e-41	-	-	-	S	-	-	-	reductase
AMAGACPK_01463	2.98e-50	-	-	-	S	-	-	-	reductase
AMAGACPK_01464	1.19e-43	-	-	-	S	-	-	-	reductase
AMAGACPK_01465	4.66e-277	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AMAGACPK_01466	1.38e-229	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_01468	3.17e-66	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01469	8.83e-208	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01470	5.51e-284	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
AMAGACPK_01471	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
AMAGACPK_01472	7.1e-311	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
AMAGACPK_01473	1.8e-99	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
AMAGACPK_01474	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AMAGACPK_01475	3.8e-80	-	-	-	-	-	-	-	-
AMAGACPK_01476	4.8e-224	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
AMAGACPK_01477	1.3e-115	ybaK	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AMAGACPK_01478	5.26e-15	-	-	-	-	-	-	-	-
AMAGACPK_01480	9.28e-317	-	-	-	S	-	-	-	Putative threonine/serine exporter
AMAGACPK_01481	3.47e-285	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01482	1.05e-226	citR	-	-	K	-	-	-	Putative sugar-binding domain
AMAGACPK_01483	2.41e-66	-	-	-	-	-	-	-	-
AMAGACPK_01484	7.91e-14	-	-	-	-	-	-	-	-
AMAGACPK_01485	8.1e-87	-	-	-	S	-	-	-	Domain of unknown function DUF1828
AMAGACPK_01486	5.38e-125	-	-	-	S	ko:K16924	-	ko00000,ko00002,ko02000	UPF0397 protein
AMAGACPK_01487	0.0	ykoD	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
AMAGACPK_01488	2.58e-189	cbiQ	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt transport
AMAGACPK_01489	9.9e-30	-	-	-	-	-	-	-	-
AMAGACPK_01490	1.24e-93	ytwI	-	-	S	-	-	-	Protein of unknown function (DUF441)
AMAGACPK_01491	0.0	citF	2.8.3.10	-	H	ko:K01643	ko02020,map02020	ko00000,ko00001,ko01000	Citrate (pro-3S)-lyase alpha chain
AMAGACPK_01492	1.79e-214	citE	4.1.3.34	-	G	ko:K01644	ko02020,map02020	ko00000,ko00001,ko01000	Belongs to the HpcH HpaI aldolase family
AMAGACPK_01493	1.6e-59	citD	-	-	C	ko:K01646	ko02020,map02020	ko00000,ko00001	Covalent carrier of the coenzyme of citrate lyase
AMAGACPK_01494	5.17e-249	citC	6.2.1.22	-	H	ko:K01910	ko02020,map02020	ko00000,ko00001,ko01000	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
AMAGACPK_01495	8.46e-197	-	-	-	I	-	-	-	Alpha/beta hydrolase family
AMAGACPK_01496	0.0	-	-	-	L	-	-	-	Transposase DDE domain
AMAGACPK_01497	0.0	citP	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
AMAGACPK_01498	5.26e-171	-	-	-	H	-	-	-	Aldolase/RraA
AMAGACPK_01499	0.0	pepC4	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
AMAGACPK_01500	1.66e-217	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
AMAGACPK_01501	0.0	frdA	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
AMAGACPK_01502	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
AMAGACPK_01503	2.34e-122	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
AMAGACPK_01504	5.74e-243	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AMAGACPK_01505	5.31e-206	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
AMAGACPK_01506	2.57e-223	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
AMAGACPK_01507	0.0	aha1	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
AMAGACPK_01508	1.86e-117	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AMAGACPK_01509	8.21e-228	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
AMAGACPK_01510	3.23e-291	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01511	4.17e-314	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
AMAGACPK_01512	6.24e-210	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_01513	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
AMAGACPK_01514	4.73e-72	-	-	-	P	ko:K06148	-	ko00000,ko02000	ABC transporter
AMAGACPK_01515	1.67e-203	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMAGACPK_01516	3.03e-243	-	-	-	P	ko:K06148	-	ko00000,ko02000	ABC transporter
AMAGACPK_01517	6.04e-49	-	-	-	-	-	-	-	-
AMAGACPK_01519	3.44e-160	-	-	-	S	-	-	-	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
AMAGACPK_01520	7.94e-114	-	-	-	K	-	-	-	GNAT family
AMAGACPK_01521	1.76e-256	XK27_00915	-	-	C	-	-	-	Luciferase-like monooxygenase
AMAGACPK_01522	7.72e-284	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01523	8.29e-179	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMAGACPK_01524	2.26e-244	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_01525	3.06e-94	-	-	-	S	-	-	-	Cupin domain
AMAGACPK_01526	3.23e-291	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01528	1.23e-81	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
AMAGACPK_01529	2.1e-270	dgoD	4.2.1.6, 4.2.1.8	-	M	ko:K01684,ko:K08323	ko00040,ko00052,ko01100,ko01120,map00040,map00052,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Mandelate racemase muconate lactonizing enzyme
AMAGACPK_01530	9.35e-63	-	-	-	-	-	-	-	-
AMAGACPK_01531	3.77e-86	-	-	-	K	-	-	-	HxlR family
AMAGACPK_01532	0.0	-	-	-	L	-	-	-	Plasmid pRiA4b ORF-3-like protein
AMAGACPK_01533	1.28e-310	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
AMAGACPK_01534	1.07e-153	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
AMAGACPK_01535	2.89e-140	ltrA	-	-	S	-	-	-	Bacterial low temperature requirement A protein (LtrA)
AMAGACPK_01536	4.45e-284	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01537	4.29e-137	ybbB	-	-	S	-	-	-	Protein of unknown function (DUF1211)
AMAGACPK_01538	0.0	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
AMAGACPK_01539	3.46e-32	-	-	-	S	-	-	-	Alpha beta hydrolase
AMAGACPK_01540	1.47e-303	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
AMAGACPK_01541	2.26e-227	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_01542	1.69e-59	-	-	-	S	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
AMAGACPK_01543	1.64e-169	adh2	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
AMAGACPK_01544	8.27e-88	-	-	-	GM	-	-	-	NAD(P)H-binding
AMAGACPK_01545	1.59e-44	-	-	-	S	-	-	-	Domain of unknown function (DUF4440)
AMAGACPK_01546	3.49e-113	-	-	-	K	-	-	-	LysR substrate binding domain
AMAGACPK_01548	2.25e-57	-	-	-	K	-	-	-	Tetracycline repressor, C-terminal all-alpha domain
AMAGACPK_01549	5.94e-100	-	-	-	S	ko:K06889	-	ko00000	X-Pro dipeptidyl-peptidase (S15 family)
AMAGACPK_01551	3.21e-244	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_01552	1.81e-311	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
AMAGACPK_01553	8.12e-60	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
AMAGACPK_01554	0.0	sufB	-	-	O	ko:K07033,ko:K09014	-	ko00000	assembly protein SufB
AMAGACPK_01555	6.98e-78	nifU	-	-	C	ko:K04488	-	ko00000	SUF system FeS assembly protein, NifU family
AMAGACPK_01556	1.39e-224	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AMAGACPK_01557	6.22e-232	sufD	-	-	O	ko:K07033,ko:K09015	-	ko00000	FeS assembly protein SufD
AMAGACPK_01558	4.43e-179	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	FeS assembly ATPase SufC
AMAGACPK_01559	5.32e-35	-	-	-	C	ko:K21832	-	ko00000	nitric oxide dioxygenase activity
AMAGACPK_01560	1.28e-168	-	-	-	L	-	-	-	PFAM transposase IS116 IS110 IS902
AMAGACPK_01561	3.43e-79	-	-	-	C	-	-	-	2Fe-2S iron-sulfur cluster binding domain
AMAGACPK_01563	3.83e-284	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01564	3.01e-232	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_01565	8.44e-300	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
AMAGACPK_01566	4.36e-93	-	-	-	K	ko:K03827	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
AMAGACPK_01567	2.43e-95	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
AMAGACPK_01568	2.33e-130	-	-	-	S	ko:K07025	-	ko00000	Haloacid dehalogenase-like hydrolase
AMAGACPK_01569	3.87e-15	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FMN_bind
AMAGACPK_01570	1.63e-109	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
AMAGACPK_01571	4.12e-204	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMAGACPK_01572	1.73e-227	-	-	-	S	-	-	-	Conserved hypothetical protein 698
AMAGACPK_01574	1.21e-243	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
AMAGACPK_01575	2.64e-243	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_01576	1.94e-130	-	-	-	I	-	-	-	PAP2 superfamily
AMAGACPK_01577	1.23e-187	-	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
AMAGACPK_01578	1.43e-310	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
AMAGACPK_01579	3.73e-72	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
AMAGACPK_01580	2.26e-244	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_01581	3.87e-16	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
AMAGACPK_01582	2.08e-95	yfhC	-	-	C	-	-	-	nitroreductase
AMAGACPK_01583	1.15e-180	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_01584	1.57e-199	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
AMAGACPK_01585	1.63e-180	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_01586	8.72e-258	pbg6	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
AMAGACPK_01587	1.31e-56	pbg6	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
AMAGACPK_01588	4.06e-39	pts23C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AMAGACPK_01589	4.22e-288	pts23C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AMAGACPK_01590	1.22e-99	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
AMAGACPK_01591	4.12e-204	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMAGACPK_01592	5.83e-176	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
AMAGACPK_01593	2.45e-44	-	-	-	L	-	-	-	Transposase
AMAGACPK_01594	4.09e-226	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
AMAGACPK_01595	0.0	-	-	-	C	-	-	-	FMN_bind
AMAGACPK_01596	3.53e-287	-	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
AMAGACPK_01597	1.45e-139	-	-	-	K	-	-	-	LysR family
AMAGACPK_01598	0.0	-	-	-	C	-	-	-	FMN_bind
AMAGACPK_01599	4.07e-140	-	-	-	K	-	-	-	LysR family
AMAGACPK_01600	1.18e-89	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
AMAGACPK_01601	2.28e-21	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
AMAGACPK_01602	1.22e-157	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
AMAGACPK_01603	4.92e-73	dhaM	2.7.1.121	-	S	ko:K05881	ko00561,map00561	ko00000,ko00001,ko01000,ko02000	PTS system fructose IIA component
AMAGACPK_01604	1.39e-120	dhaL	2.7.1.121	-	S	ko:K05879	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak2
AMAGACPK_01605	1.04e-222	dhaK	2.7.1.121	-	G	ko:K05878	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak1 domain
AMAGACPK_01606	6.24e-210	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_01608	8.51e-205	-	-	-	-	-	-	-	-
AMAGACPK_01609	1.67e-219	-	-	-	-	-	-	-	-
AMAGACPK_01610	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
AMAGACPK_01611	1.83e-256	ynbB	-	-	P	-	-	-	aluminum resistance
AMAGACPK_01612	8.1e-238	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_01613	1.9e-216	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
AMAGACPK_01614	4.95e-89	yqhL	-	-	P	-	-	-	Rhodanese-like protein
AMAGACPK_01615	1e-47	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
AMAGACPK_01616	9.32e-154	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Rhomboid family
AMAGACPK_01617	1.07e-135	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AMAGACPK_01618	6.25e-29	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
AMAGACPK_01619	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
AMAGACPK_01620	0.0	-	-	-	S	-	-	-	membrane
AMAGACPK_01621	7.04e-218	-	-	-	G	-	-	-	BadF/BadG/BcrA/BcrD ATPase family
AMAGACPK_01622	9.43e-52	-	-	-	S	ko:K07473	-	ko00000,ko02048	RelB antitoxin
AMAGACPK_01623	2.74e-69	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	Bacterial toxin of type II toxin-antitoxin system, YafQ
AMAGACPK_01624	2.22e-60	hupB2	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
AMAGACPK_01625	1.49e-178	-	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	abc transporter atp-binding protein
AMAGACPK_01626	1.55e-201	isdF	-	-	U	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AMAGACPK_01627	2.07e-203	isdE	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
AMAGACPK_01628	7.04e-159	-	-	-	M	ko:K14193	ko05150,map05150	ko00000,ko00001	Iron Transport-associated domain
AMAGACPK_01630	1.75e-120	-	-	-	-	-	-	-	-
AMAGACPK_01631	9.13e-164	-	-	-	S	-	-	-	SLAP domain
AMAGACPK_01632	7.65e-65	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
AMAGACPK_01633	6.24e-210	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_01634	2.87e-107	-	-	-	S	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_01635	3.2e-176	-	-	-	S	-	-	-	Protein of unknown function (DUF3100)
AMAGACPK_01636	2.48e-313	-	-	-	S	ko:K12941	-	ko00000,ko01002	Peptidase dimerisation domain
AMAGACPK_01637	6.53e-291	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
AMAGACPK_01638	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
AMAGACPK_01639	1.76e-193	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
AMAGACPK_01640	0.0	sufI	-	-	Q	-	-	-	Multicopper oxidase
AMAGACPK_01641	1.8e-34	-	-	-	-	-	-	-	-
AMAGACPK_01642	2.24e-202	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
AMAGACPK_01643	8.21e-215	ldh3	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	lactate/malate dehydrogenase, alpha/beta C-terminal domain
AMAGACPK_01644	7.84e-89	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
AMAGACPK_01645	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
AMAGACPK_01646	6.84e-253	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
AMAGACPK_01647	1.36e-36	cjaA	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
AMAGACPK_01648	8.25e-150	cjaA	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
AMAGACPK_01649	7.91e-164	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
AMAGACPK_01650	1.68e-149	glnP7	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter permease
AMAGACPK_01651	2.18e-98	glnP9	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter, permease protein
AMAGACPK_01652	5.75e-284	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01653	2.9e-31	glnP9	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter, permease protein
AMAGACPK_01655	3.71e-76	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
AMAGACPK_01656	5.59e-173	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AMAGACPK_01657	5.58e-59	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
AMAGACPK_01658	8.13e-215	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
AMAGACPK_01659	1.13e-108	-	-	-	S	ko:K19055	-	ko00000,ko01000,ko03016	Aminoacyl-tRNA editing domain
AMAGACPK_01660	2.95e-283	-	-	-	S	-	-	-	SLAP domain
AMAGACPK_01661	6.5e-122	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
AMAGACPK_01662	2.19e-18	-	-	-	-	-	-	-	-
AMAGACPK_01663	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
AMAGACPK_01664	3.52e-163	csrR	-	-	K	-	-	-	response regulator
AMAGACPK_01665	2.19e-125	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
AMAGACPK_01666	8.01e-276	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
AMAGACPK_01667	5.09e-78	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
AMAGACPK_01668	1.59e-141	yqeK	-	-	H	-	-	-	Hydrolase, HD family
AMAGACPK_01669	2.51e-157	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
AMAGACPK_01670	5.03e-256	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
AMAGACPK_01671	6.85e-109	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
AMAGACPK_01672	5.81e-253	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
AMAGACPK_01673	1.25e-192	add	3.5.4.2, 3.5.4.4	-	F	ko:K01488,ko:K02029,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AMAGACPK_01674	8.69e-76	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AMAGACPK_01675	9.64e-38	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
AMAGACPK_01676	1.07e-93	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
AMAGACPK_01677	5.46e-47	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
AMAGACPK_01678	2.37e-203	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMAGACPK_01679	3.75e-243	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_01680	9.37e-144	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	domain protein
AMAGACPK_01681	4.48e-178	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
AMAGACPK_01682	1.81e-89	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
AMAGACPK_01683	2.79e-112	-	-	-	-	-	-	-	-
AMAGACPK_01684	1.45e-255	-	-	-	S	-	-	-	Domain of unknown function (DUF389)
AMAGACPK_01685	7.72e-284	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01686	2.25e-72	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
AMAGACPK_01687	4.32e-63	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
AMAGACPK_01688	3.32e-284	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01689	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AMAGACPK_01690	1.31e-215	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
AMAGACPK_01691	0.0	dnaB2	-	-	L	ko:K03346	-	ko00000,ko03032	Replication initiation and membrane attachment
AMAGACPK_01692	1.29e-106	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
AMAGACPK_01693	2.16e-136	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
AMAGACPK_01694	7.81e-199	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
AMAGACPK_01695	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AMAGACPK_01696	1.98e-35	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
AMAGACPK_01697	2.53e-139	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
AMAGACPK_01698	1.33e-67	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
AMAGACPK_01699	2.43e-239	-	-	-	S	-	-	-	Bacteriocin helveticin-J
AMAGACPK_01700	0.0	-	-	-	M	-	-	-	Peptidase family M1 domain
AMAGACPK_01701	2.04e-226	-	-	-	S	-	-	-	SLAP domain
AMAGACPK_01702	4.65e-278	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
AMAGACPK_01703	2.59e-313	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
AMAGACPK_01704	8.78e-157	XK27_10290	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
AMAGACPK_01705	1.35e-71	ytpP	-	-	CO	-	-	-	Thioredoxin
AMAGACPK_01707	2.16e-163	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
AMAGACPK_01708	1.63e-281	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
AMAGACPK_01709	3.67e-174	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
AMAGACPK_01710	1.61e-101	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
AMAGACPK_01711	1.2e-41	-	-	-	-	-	-	-	-
AMAGACPK_01712	3.12e-196	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
AMAGACPK_01713	5.74e-96	eda	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	KDPG and KHG aldolase
AMAGACPK_01714	0.0	-	-	-	-	-	-	-	-
AMAGACPK_01715	9.67e-33	-	-	-	S	-	-	-	Domain of unknown function DUF1829
AMAGACPK_01717	4.72e-241	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
AMAGACPK_01718	0.0	yhaN	-	-	L	-	-	-	AAA domain
AMAGACPK_01719	4.24e-289	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
AMAGACPK_01720	8.43e-73	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
AMAGACPK_01721	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
AMAGACPK_01722	1.21e-207	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
AMAGACPK_01723	0.0	pps	2.7.9.2	-	H	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
AMAGACPK_01724	9.95e-285	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01725	7.62e-134	-	-	-	G	-	-	-	Phosphoglycerate mutase family
AMAGACPK_01726	5.46e-182	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
AMAGACPK_01727	2.74e-06	-	-	-	S	-	-	-	PFAM Archaeal ATPase
AMAGACPK_01728	2.68e-218	-	-	-	L	-	-	-	Bifunctional protein
AMAGACPK_01729	4.95e-164	citG	2.4.2.52	-	H	ko:K05966	ko02020,map02020	ko00000,ko00001,ko01000	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
AMAGACPK_01730	4.77e-248	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
AMAGACPK_01731	1.28e-226	-	-	-	S	-	-	-	PFAM Archaeal ATPase
AMAGACPK_01732	1.86e-91	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
AMAGACPK_01733	3.83e-284	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01734	1.08e-161	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
AMAGACPK_01735	8.86e-210	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_01736	3.47e-285	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01737	1.48e-139	-	-	-	EGP	-	-	-	Major Facilitator
AMAGACPK_01738	9.16e-301	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMAGACPK_01739	1.38e-95	-	-	-	EGP	-	-	-	Major Facilitator
AMAGACPK_01740	2.58e-45	-	-	-	-	-	-	-	-
AMAGACPK_01742	3.3e-42	-	-	-	-	-	-	-	-
AMAGACPK_01743	3.98e-97	-	-	-	M	-	-	-	LysM domain
AMAGACPK_01744	3.23e-291	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01746	8.86e-210	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_01747	1.01e-98	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	UbiA prenyltransferase family
AMAGACPK_01748	7.02e-36	-	-	-	-	-	-	-	-
AMAGACPK_01749	1.32e-105	-	-	-	S	-	-	-	PFAM Archaeal ATPase
AMAGACPK_01750	8.08e-108	-	-	-	S	-	-	-	PFAM Archaeal ATPase
AMAGACPK_01751	3.38e-230	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_01752	6.03e-218	fba	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-1,6-bisphosphate aldolase, class II
AMAGACPK_01753	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
AMAGACPK_01754	5.6e-129	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
AMAGACPK_01755	2.23e-197	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AMAGACPK_01756	9.64e-307	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
AMAGACPK_01758	1.59e-61	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain
AMAGACPK_01759	8.86e-210	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_01760	3.54e-300	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
AMAGACPK_01761	6.97e-289	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
AMAGACPK_01762	5.6e-291	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
AMAGACPK_01763	6.34e-283	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01764	0.0	phoR	2.7.13.3	-	T	ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
AMAGACPK_01765	4.65e-157	phoB	-	-	T	ko:K07658	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C terminal
AMAGACPK_01766	6.07e-138	-	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
AMAGACPK_01767	4.66e-179	pstB	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
AMAGACPK_01768	8.63e-195	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
AMAGACPK_01769	8.73e-205	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
AMAGACPK_01770	9.14e-187	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
AMAGACPK_01771	4.84e-42	-	-	-	-	-	-	-	-
AMAGACPK_01772	3.11e-256	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
AMAGACPK_01773	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
AMAGACPK_01774	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
AMAGACPK_01775	1.39e-156	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
AMAGACPK_01776	6.75e-216	-	-	-	K	-	-	-	LysR substrate binding domain
AMAGACPK_01777	9.32e-109	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
AMAGACPK_01778	1.41e-51	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
AMAGACPK_01779	3.01e-294	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
AMAGACPK_01780	1.03e-206	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
AMAGACPK_01781	1.13e-225	hepT	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
AMAGACPK_01782	8.7e-166	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
AMAGACPK_01783	0.0	cydD	-	-	CO	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AMAGACPK_01784	0.0	cydC	-	-	CO	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
AMAGACPK_01785	9.83e-236	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome d ubiquinol oxidase subunit II
AMAGACPK_01786	7.25e-309	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
AMAGACPK_01787	6.59e-296	-	-	-	L	-	-	-	Transposase DDE domain
AMAGACPK_01788	1.29e-27	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
AMAGACPK_01789	3.75e-168	-	-	-	K	-	-	-	rpiR family
AMAGACPK_01790	0.0	-	-	-	L	-	-	-	Transposase
AMAGACPK_01791	1.81e-270	-	2.7.1.211	-	G	ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
AMAGACPK_01792	1.32e-151	-	-	-	S	-	-	-	Putative esterase
AMAGACPK_01793	3.39e-154	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
AMAGACPK_01794	1.92e-102	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
AMAGACPK_01796	0.0	mdr	-	-	EGP	-	-	-	Major Facilitator
AMAGACPK_01797	7.29e-287	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
AMAGACPK_01800	5.31e-211	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
AMAGACPK_01803	3.84e-113	-	-	-	S	-	-	-	COG NOG38524 non supervised orthologous group
AMAGACPK_01804	1.58e-101	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
AMAGACPK_01805	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
AMAGACPK_01806	1.3e-40	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
AMAGACPK_01807	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
AMAGACPK_01808	5.35e-224	mprF	-	-	S	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
AMAGACPK_01809	3.68e-256	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
AMAGACPK_01810	1.72e-286	-	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyl transferase 4-like domain
AMAGACPK_01838	3.84e-113	-	-	-	S	-	-	-	COG NOG38524 non supervised orthologous group
AMAGACPK_01841	1.76e-234	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
AMAGACPK_01842	6.9e-150	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
AMAGACPK_01843	8.77e-137	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
AMAGACPK_01844	6.38e-184	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
AMAGACPK_01845	4.25e-119	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
AMAGACPK_01846	0.0	sasH	3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45	-	F	ko:K01081,ko:K01119,ko:K07004,ko:K08693,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
AMAGACPK_01847	9.89e-74	-	-	-	-	-	-	-	-
AMAGACPK_01848	0.0	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
AMAGACPK_01849	1.23e-231	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
AMAGACPK_01850	1.6e-272	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
AMAGACPK_01851	3.81e-295	-	-	-	L	-	-	-	Transposase DDE domain
AMAGACPK_01852	3.09e-71	-	-	-	-	-	-	-	-
AMAGACPK_01853	2.96e-23	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
AMAGACPK_01854	4.28e-187	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
AMAGACPK_01855	4.52e-126	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
AMAGACPK_01856	4.31e-175	-	-	-	-	-	-	-	-
AMAGACPK_01857	5.53e-147	-	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
AMAGACPK_01858	9.95e-285	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01859	1.55e-29	-	-	-	-	-	-	-	-
AMAGACPK_01860	8.12e-144	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AMAGACPK_01861	4.13e-186	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
AMAGACPK_01862	5.62e-95	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
AMAGACPK_01863	2.34e-76	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
AMAGACPK_01864	5.37e-72	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
AMAGACPK_01865	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
AMAGACPK_01866	1.18e-66	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
AMAGACPK_01867	9.37e-96	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
AMAGACPK_01868	5.32e-57	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
AMAGACPK_01869	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AMAGACPK_01870	1.26e-303	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
AMAGACPK_01871	3.16e-231	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
AMAGACPK_01872	1.74e-274	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AMAGACPK_01873	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AMAGACPK_01874	7.58e-69	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
AMAGACPK_01875	1.39e-237	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
AMAGACPK_01876	3.89e-132	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
AMAGACPK_01877	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
AMAGACPK_01878	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
AMAGACPK_01879	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
AMAGACPK_01880	1.06e-58	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AMAGACPK_01881	2.79e-102	-	-	-	-	-	-	-	-
AMAGACPK_01882	2.14e-231	-	-	-	M	-	-	-	CHAP domain
AMAGACPK_01883	0.0	scrA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
AMAGACPK_01884	0.0	scrB	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
AMAGACPK_01885	2.14e-234	scrR	-	-	K	ko:K03484	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
AMAGACPK_01886	3.24e-290	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
AMAGACPK_01887	8.74e-146	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
AMAGACPK_01888	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
AMAGACPK_01889	0.0	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
AMAGACPK_01890	6.43e-230	frc	2.8.3.16	-	C	ko:K07749	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
AMAGACPK_01891	3.06e-53	bbsF_1	2.8.3.19	-	C	ko:K18702	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
AMAGACPK_01892	9.48e-31	-	-	-	-	-	-	-	-
AMAGACPK_01893	4.01e-84	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
AMAGACPK_01894	5.51e-46	-	-	-	S	-	-	-	Transposase C of IS166 homeodomain
AMAGACPK_01895	1.28e-311	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
AMAGACPK_01896	5.79e-247	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
AMAGACPK_01897	3.93e-125	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
AMAGACPK_01898	3.69e-171	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
AMAGACPK_01899	8.72e-111	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
AMAGACPK_01900	4.27e-167	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
AMAGACPK_01901	3.05e-200	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AMAGACPK_01902	1.4e-80	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
AMAGACPK_01903	8.4e-199	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
AMAGACPK_01904	3.74e-69	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
AMAGACPK_01905	1.15e-146	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AMAGACPK_01906	1.18e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2508)
AMAGACPK_01907	9.21e-142	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
AMAGACPK_01908	6.31e-68	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
AMAGACPK_01909	1.15e-47	-	-	-	M	-	-	-	lipopolysaccharide 3-alpha-galactosyltransferase activity
AMAGACPK_01910	1.12e-136	-	-	-	M	-	-	-	family 8
AMAGACPK_01911	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AMAGACPK_01912	1.08e-117	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
AMAGACPK_01913	6.15e-36	-	-	-	-	-	-	-	-
AMAGACPK_01914	5.31e-149	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
AMAGACPK_01915	9.32e-189	-	2.1.1.172	-	J	ko:K00564,ko:K10716	-	ko00000,ko01000,ko02000,ko03009	Ion channel
AMAGACPK_01916	1.61e-72	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
AMAGACPK_01917	3.72e-111	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
AMAGACPK_01919	5.61e-118	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_01920	2.89e-151	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
AMAGACPK_01921	3.83e-178	pstB1	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
AMAGACPK_01922	5.24e-187	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
AMAGACPK_01923	2.56e-195	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
AMAGACPK_01924	4.05e-284	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01925	2.13e-210	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
AMAGACPK_01926	5.48e-201	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
AMAGACPK_01927	1.05e-160	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
AMAGACPK_01928	2.69e-90	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
AMAGACPK_01929	5e-130	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
AMAGACPK_01930	3.73e-33	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
AMAGACPK_01931	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AMAGACPK_01932	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
AMAGACPK_01933	1.19e-45	-	-	-	-	-	-	-	-
AMAGACPK_01934	1.55e-122	comX	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	Belongs to the sigma-70 factor family
AMAGACPK_01935	2.69e-178	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AMAGACPK_01936	2.45e-98	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
AMAGACPK_01937	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
AMAGACPK_01938	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AMAGACPK_01939	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
AMAGACPK_01940	5.22e-131	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
AMAGACPK_01941	1.11e-69	-	-	-	-	-	-	-	-
AMAGACPK_01942	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
AMAGACPK_01943	8.69e-66	-	-	-	-	-	-	-	-
AMAGACPK_01944	5.69e-235	-	-	-	S	-	-	-	AAA domain
AMAGACPK_01945	8.07e-163	gpmA1	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AMAGACPK_01946	2.42e-33	-	-	-	-	-	-	-	-
AMAGACPK_01947	1.46e-206	-	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
AMAGACPK_01948	1.56e-160	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
AMAGACPK_01949	1.49e-171	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
AMAGACPK_01950	1.56e-152	-	3.8.1.2	-	S	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
AMAGACPK_01951	6.24e-210	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_01952	4.57e-135	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
AMAGACPK_01953	6.11e-66	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
AMAGACPK_01954	4.4e-86	-	-	-	K	-	-	-	LytTr DNA-binding domain
AMAGACPK_01956	2.26e-244	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_01957	3.76e-18	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
AMAGACPK_01958	7.51e-16	-	-	-	L	-	-	-	Transposase
AMAGACPK_01959	1.01e-22	-	-	-	L	-	-	-	Transposase
AMAGACPK_01960	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
AMAGACPK_01961	4.28e-47	nt5e	3.1.3.18	-	L	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	haloacid dehalogenase-like hydrolase
AMAGACPK_01962	1.15e-180	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_01963	6.08e-26	nt5e	3.1.3.18	-	L	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	haloacid dehalogenase-like hydrolase
AMAGACPK_01964	1.52e-157	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
AMAGACPK_01965	4.17e-162	sga	5.1.3.22	-	G	ko:K03079	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Xylose isomerase-like TIM barrel
AMAGACPK_01966	2.85e-115	ulaD	4.1.1.85, 4.1.2.43	-	G	ko:K03078,ko:K08093	ko00030,ko00040,ko00053,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00040,map00053,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Orotidine 5'-phosphate decarboxylase / HUMPS family
AMAGACPK_01967	4.82e-42	ulaB	2.7.1.194	-	G	ko:K02822	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
AMAGACPK_01968	6.58e-293	sgaT	-	-	S	ko:K03475	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
AMAGACPK_01969	4.93e-80	-	2.7.1.194	-	G	ko:K02821	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AMAGACPK_01970	6.33e-221	ulaG	-	-	S	ko:K03476	ko00053,ko01100,ko01120,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Beta-lactamase superfamily domain
AMAGACPK_01971	1.01e-245	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMAGACPK_01972	1.93e-100	-	-	-	S	-	-	-	helix_turn_helix, Deoxyribose operon repressor
AMAGACPK_01973	6.72e-177	-	-	-	EP	-	-	-	Plasmid replication protein
AMAGACPK_01974	4.63e-32	-	-	-	-	-	-	-	-
AMAGACPK_01975	1.97e-287	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_01976	7.14e-183	-	-	-	L	-	-	-	Phage integrase family
AMAGACPK_01977	3.94e-85	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
AMAGACPK_01978	3.22e-103	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AMAGACPK_01979	5.69e-190	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
AMAGACPK_01980	1.53e-175	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AMAGACPK_01981	1.58e-201	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AMAGACPK_01982	5.91e-198	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AMAGACPK_01983	2.23e-80	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
AMAGACPK_01984	3.62e-218	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AMAGACPK_01985	3.82e-82	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AMAGACPK_01986	2.07e-73	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
AMAGACPK_01987	1.89e-21	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
AMAGACPK_01988	3.13e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
AMAGACPK_01989	1.51e-154	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
AMAGACPK_01990	1.2e-299	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
AMAGACPK_01991	4.95e-93	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
AMAGACPK_01992	2.22e-34	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
AMAGACPK_01993	3.73e-110	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
AMAGACPK_01994	4.84e-73	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
AMAGACPK_01995	7.18e-121	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
AMAGACPK_01996	7.94e-90	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
AMAGACPK_01997	1e-39	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AMAGACPK_01998	1.23e-123	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
AMAGACPK_01999	3.03e-44	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
AMAGACPK_02000	3.62e-79	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
AMAGACPK_02001	1.56e-55	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
AMAGACPK_02002	1.45e-34	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
AMAGACPK_02003	1.66e-100	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AMAGACPK_02004	8.7e-157	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
AMAGACPK_02005	9.07e-73	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
AMAGACPK_02006	1.14e-62	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AMAGACPK_02007	3.3e-197	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
AMAGACPK_02008	1.14e-63	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
AMAGACPK_02009	4.68e-138	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
AMAGACPK_02010	6.64e-146	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
AMAGACPK_02011	6.34e-66	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
AMAGACPK_02012	0.0	-	-	-	L	-	-	-	Transposase DDE domain
AMAGACPK_02013	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AMAGACPK_02014	1.39e-106	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
AMAGACPK_02015	1.47e-91	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
AMAGACPK_02016	7.71e-157	comC	3.4.23.43	-	NOU	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	Bacterial Peptidase A24 N-terminal domain
AMAGACPK_02017	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AMAGACPK_02018	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AMAGACPK_02019	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
AMAGACPK_02020	1.01e-245	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMAGACPK_02021	4.19e-92	ytsP	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
AMAGACPK_02026	2.84e-108	-	-	-	K	-	-	-	FR47-like protein
AMAGACPK_02027	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
AMAGACPK_02028	2.77e-248	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AMAGACPK_02029	3.91e-214	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
AMAGACPK_02030	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AMAGACPK_02031	2.75e-307	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
AMAGACPK_02032	1.61e-81	-	-	-	J	ko:K07571	-	ko00000	S1 RNA binding domain
AMAGACPK_02033	7.52e-78	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
AMAGACPK_02034	1.01e-245	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMAGACPK_02035	4.19e-92	ytsP	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
AMAGACPK_02040	2.84e-108	-	-	-	K	-	-	-	FR47-like protein
AMAGACPK_02041	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
AMAGACPK_02042	2.77e-248	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AMAGACPK_02043	3.91e-214	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
AMAGACPK_02044	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AMAGACPK_02045	2.75e-307	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
AMAGACPK_02046	1.61e-81	-	-	-	J	ko:K07571	-	ko00000	S1 RNA binding domain
AMAGACPK_02047	7.52e-78	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
AMAGACPK_02048	1.01e-245	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMAGACPK_02049	6.06e-54	yabO	-	-	J	-	-	-	S4 domain protein
AMAGACPK_02050	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AMAGACPK_02051	1.89e-134	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
AMAGACPK_02052	2.93e-234	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
AMAGACPK_02053	2.91e-165	-	-	-	S	-	-	-	(CBS) domain
AMAGACPK_02054	0.0	-	-	-	L	-	-	-	Transposase
AMAGACPK_02055	1.62e-276	alr	5.1.1.1, 5.1.1.5	-	E	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AMAGACPK_02056	9.39e-80	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
AMAGACPK_02057	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
AMAGACPK_02058	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
AMAGACPK_02059	1.07e-52	rpmE	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
AMAGACPK_02060	0.0	dexB	3.2.1.70	-	G	ko:K01215	-	ko00000,ko01000	Alpha amylase, catalytic domain protein
AMAGACPK_02061	1.64e-200	yhaX	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
AMAGACPK_02062	0.0	-	-	-	E	-	-	-	amino acid
AMAGACPK_02063	1.33e-295	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AMAGACPK_02064	1.17e-56	-	-	-	-	-	-	-	-
AMAGACPK_02065	8.68e-69	-	-	-	-	-	-	-	-
AMAGACPK_02066	3.44e-238	-	-	-	C	-	-	-	FMN-dependent dehydrogenase
AMAGACPK_02067	8.88e-178	-	-	-	P	-	-	-	Voltage gated chloride channel
AMAGACPK_02068	5.44e-284	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_02069	3.74e-125	-	-	-	-	-	-	-	-
AMAGACPK_02070	1.94e-96	-	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	UbiA prenyltransferase family
AMAGACPK_02071	1.82e-05	-	-	-	-	-	-	-	-
AMAGACPK_02072	1.04e-194	-	-	-	M	-	-	-	Rib/alpha-like repeat
AMAGACPK_02073	6.24e-210	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_02074	5.76e-62	-	-	-	M	-	-	-	Rib/alpha-like repeat
AMAGACPK_02075	4.21e-148	-	-	-	M	-	-	-	Rib/alpha-like repeat
AMAGACPK_02076	1.89e-129	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
AMAGACPK_02078	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
AMAGACPK_02079	1.1e-54	-	-	-	K	-	-	-	Helix-turn-helix
AMAGACPK_02080	9.63e-136	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
AMAGACPK_02081	8.34e-294	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
AMAGACPK_02082	2.07e-196	msmR	-	-	K	-	-	-	AraC-like ligand binding domain
AMAGACPK_02083	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
AMAGACPK_02084	1.69e-61	-	-	-	F	-	-	-	AAA domain
AMAGACPK_02085	4.61e-104	-	-	-	K	-	-	-	acetyltransferase
AMAGACPK_02086	6.58e-311	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AMAGACPK_02087	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
AMAGACPK_02088	2.45e-90	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
AMAGACPK_02089	1.44e-88	-	-	-	S	-	-	-	Domain of unknown function (DUF1934)
AMAGACPK_02090	3.47e-285	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_02091	0.0	-	-	-	S	ko:K06885	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
AMAGACPK_02092	1.07e-57	-	-	-	-	-	-	-	-
AMAGACPK_02093	1.13e-218	-	-	-	GK	-	-	-	ROK family
AMAGACPK_02094	5.4e-226	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AMAGACPK_02095	0.0	-	-	-	S	-	-	-	SLAP domain
AMAGACPK_02096	5.52e-113	-	-	-	-	-	-	-	-
AMAGACPK_02097	3.82e-216	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMAGACPK_02098	9.61e-16	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMAGACPK_02099	1.81e-307	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AMAGACPK_02100	2.05e-190	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
AMAGACPK_02101	9.99e-53	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
AMAGACPK_02102	8.93e-194	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
AMAGACPK_02103	5.17e-129	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
AMAGACPK_02104	2.72e-189	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
AMAGACPK_02105	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AMAGACPK_02106	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
AMAGACPK_02107	1.71e-173	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
AMAGACPK_02108	4.57e-135	-	-	-	S	ko:K06872	-	ko00000	TPM domain
AMAGACPK_02109	1.5e-116	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	MafB19-like deaminase
AMAGACPK_02110	4.07e-245	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
AMAGACPK_02111	7.04e-145	-	-	-	E	-	-	-	Belongs to the SOS response-associated peptidase family
AMAGACPK_02113	1.17e-143	-	-	-	-	-	-	-	-
AMAGACPK_02114	8.08e-100	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
AMAGACPK_02115	3.4e-93	hsp	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
AMAGACPK_02116	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
AMAGACPK_02117	6.54e-222	oppF	-	-	P	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
AMAGACPK_02118	7.1e-252	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
AMAGACPK_02119	7.82e-240	oppC	-	-	EP	ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AMAGACPK_02120	1.34e-191	oppB	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AMAGACPK_02121	2.64e-266	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
AMAGACPK_02122	0.0	-	-	-	L	-	-	-	Transposase DDE domain
AMAGACPK_02123	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
AMAGACPK_02124	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
AMAGACPK_02125	1.77e-157	ypgQ	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
AMAGACPK_02126	0.0	pepC2	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
AMAGACPK_02128	9.39e-71	-	-	-	-	-	-	-	-
AMAGACPK_02129	7.03e-307	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AMAGACPK_02130	2.51e-288	-	-	-	S	-	-	-	Fibronectin type III domain
AMAGACPK_02131	1.31e-35	-	-	-	S	-	-	-	Fibronectin type III domain
AMAGACPK_02132	5.6e-291	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
AMAGACPK_02133	0.0	XK27_08315	-	-	M	-	-	-	Sulfatase
AMAGACPK_02134	1.03e-145	plsY1	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
AMAGACPK_02135	2.92e-258	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
AMAGACPK_02136	5.18e-128	-	-	-	G	-	-	-	Aldose 1-epimerase
AMAGACPK_02137	4.51e-171	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AMAGACPK_02138	1.72e-149	-	-	-	-	-	-	-	-
AMAGACPK_02139	1.98e-168	-	-	-	-	-	-	-	-
AMAGACPK_02140	1.68e-207	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
AMAGACPK_02141	2.47e-138	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
AMAGACPK_02142	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
AMAGACPK_02143	7.32e-232	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
AMAGACPK_02144	2.09e-286	-	-	-	NU	-	-	-	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
AMAGACPK_02146	1.53e-142	-	-	-	S	-	-	-	SLAP domain
AMAGACPK_02147	6.87e-27	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
AMAGACPK_02149	4.56e-191	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
AMAGACPK_02151	3.6e-101	-	-	-	K	-	-	-	DNA-templated transcription, initiation
AMAGACPK_02152	2.85e-54	-	-	-	-	-	-	-	-
AMAGACPK_02154	7.39e-165	-	-	-	S	-	-	-	SLAP domain
AMAGACPK_02155	1.05e-54	-	-	-	S	-	-	-	Protein of unknown function (DUF2922)
AMAGACPK_02156	1.21e-40	-	-	-	-	-	-	-	-
AMAGACPK_02157	2.77e-25	-	-	-	-	-	-	-	-
AMAGACPK_02158	9.13e-157	-	-	-	L	-	-	-	PFAM transposase IS116 IS110 IS902
AMAGACPK_02159	3.61e-60	-	-	-	-	-	-	-	-
AMAGACPK_02160	4.53e-76	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
AMAGACPK_02162	1.67e-203	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMAGACPK_02163	5.09e-41	-	-	-	S	-	-	-	PFAM Archaeal ATPase
AMAGACPK_02164	6.55e-97	-	-	-	-	-	-	-	-
AMAGACPK_02165	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
AMAGACPK_02166	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
AMAGACPK_02167	1.62e-277	yqjV	-	-	EGP	-	-	-	Major Facilitator Superfamily
AMAGACPK_02168	2.19e-292	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
AMAGACPK_02169	1.69e-132	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
AMAGACPK_02170	1.35e-180	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AMAGACPK_02171	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Ribonucleoside-triphosphate reductase
AMAGACPK_02172	0.0	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
AMAGACPK_02173	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
AMAGACPK_02174	0.0	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
AMAGACPK_02175	5.18e-109	-	-	-	-	-	-	-	-
AMAGACPK_02176	5.61e-138	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
AMAGACPK_02177	1.87e-220	-	-	-	L	-	-	-	COG3385 FOG Transposase and inactivated derivatives
AMAGACPK_02178	2.52e-228	-	-	-	L	-	-	-	DDE superfamily endonuclease
AMAGACPK_02179	7.05e-103	-	-	-	L	-	-	-	COG3385 FOG Transposase and inactivated derivatives
AMAGACPK_02180	1.29e-190	-	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
AMAGACPK_02181	1.91e-168	phnB	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
AMAGACPK_02182	6.34e-180	phnC	3.6.3.28	-	P	ko:K02041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
AMAGACPK_02183	2.53e-212	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphonate ABC transporter
AMAGACPK_02185	3.92e-110	usp5	-	-	T	-	-	-	universal stress protein
AMAGACPK_02186	2.5e-191	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
AMAGACPK_02187	3.77e-113	-	2.7.1.200, 2.7.1.204	-	G	ko:K02773,ko:K20112	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AMAGACPK_02188	4.83e-117	ntd	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside
AMAGACPK_02190	0.0	-	-	-	S	ko:K06921	-	ko00000	Archaea bacterial proteins of unknown function
AMAGACPK_02191	3.32e-284	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_02192	8.82e-277	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AMAGACPK_02193	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 31 family
AMAGACPK_02194	2.7e-199	-	-	-	I	-	-	-	alpha/beta hydrolase fold
AMAGACPK_02195	7.8e-167	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
AMAGACPK_02196	1.69e-258	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
AMAGACPK_02197	2.45e-164	-	-	-	-	-	-	-	-
AMAGACPK_02198	2.43e-263	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
AMAGACPK_02199	7.36e-291	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
AMAGACPK_02200	1.01e-170	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
AMAGACPK_02201	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
AMAGACPK_02202	1.67e-203	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMAGACPK_02203	1.11e-177	-	-	-	-	-	-	-	-
AMAGACPK_02204	8.37e-161	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
AMAGACPK_02205	2.62e-289	-	-	-	L	-	-	-	Transposase
AMAGACPK_02206	6.24e-210	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_02207	3.99e-17	-	-	-	L	-	-	-	Transposase
AMAGACPK_02208	1.76e-233	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AMAGACPK_02209	2.32e-47	-	-	-	-	-	-	-	-
AMAGACPK_02210	1.63e-180	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_02211	5.29e-164	-	-	-	S	-	-	-	Alpha/beta hydrolase family
AMAGACPK_02212	2.62e-199	epsV	-	-	S	-	-	-	glycosyl transferase family 2
AMAGACPK_02213	9.18e-187	-	-	-	S	-	-	-	Protein of unknown function (DUF1002)
AMAGACPK_02214	5.07e-190	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AMAGACPK_02215	1.24e-232	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
AMAGACPK_02216	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AMAGACPK_02217	2.29e-112	-	-	-	-	-	-	-	-
AMAGACPK_02218	1.29e-200	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMAGACPK_02219	1.24e-169	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
AMAGACPK_02220	5.09e-119	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	6-O-methylguanine DNA methyltransferase, DNA binding domain
AMAGACPK_02221	1.14e-164	terC	-	-	P	-	-	-	Integral membrane protein TerC family
AMAGACPK_02222	7.63e-85	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
AMAGACPK_02223	4.04e-155	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
AMAGACPK_02224	0.0	XK27_05795	-	-	P	ko:K17073,ko:K17074	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
AMAGACPK_02225	2.89e-173	glnQ	-	-	E	ko:K17076	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
AMAGACPK_02226	1.4e-191	yhaH	-	-	S	-	-	-	Protein of unknown function (DUF805)
AMAGACPK_02227	6.59e-296	-	-	-	L	-	-	-	Transposase DDE domain
AMAGACPK_02228	2.42e-204	-	-	-	L	-	-	-	HNH nucleases
AMAGACPK_02229	1.11e-154	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
AMAGACPK_02230	3.67e-225	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
AMAGACPK_02231	4.75e-239	-	-	-	M	-	-	-	Glycosyl transferase
AMAGACPK_02232	1.34e-09	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMAGACPK_02233	9.69e-25	-	-	-	-	-	-	-	-
AMAGACPK_02234	0.0	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
AMAGACPK_02235	1.29e-200	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMAGACPK_02236	8.27e-47	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
AMAGACPK_02237	3.34e-92	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
AMAGACPK_02238	7.23e-244	ysdE	-	-	P	-	-	-	Citrate transporter
AMAGACPK_02239	1.43e-125	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
AMAGACPK_02240	1.16e-207	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
AMAGACPK_02241	1.05e-222	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
AMAGACPK_02242	0.0	-	-	-	S	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
AMAGACPK_02243	1.19e-114	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
AMAGACPK_02244	4.34e-216	pepI	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
AMAGACPK_02245	6.67e-115	-	-	-	G	-	-	-	Peptidase_C39 like family
AMAGACPK_02246	2.16e-207	-	-	-	M	-	-	-	NlpC/P60 family
AMAGACPK_02247	1.93e-32	-	-	-	G	-	-	-	Peptidase_C39 like family
AMAGACPK_02248	1.06e-247	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMAGACPK_02249	8.64e-107	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
AMAGACPK_02250	3.17e-224	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
AMAGACPK_02251	1.19e-188	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
AMAGACPK_02252	7.44e-192	yycI	-	-	S	-	-	-	YycH protein
AMAGACPK_02253	0.0	yycH	-	-	S	-	-	-	YycH protein
AMAGACPK_02254	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
AMAGACPK_02255	3.98e-169	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
AMAGACPK_02257	1.09e-46	-	-	-	-	-	-	-	-
AMAGACPK_02259	4.19e-192	-	-	-	I	-	-	-	Acyl-transferase
AMAGACPK_02260	7.23e-201	arbx	-	-	M	-	-	-	Glycosyl transferase family 8
AMAGACPK_02261	1.91e-236	-	-	-	M	-	-	-	Glycosyl transferase family 8
AMAGACPK_02262	5.48e-235	-	-	-	M	-	-	-	Glycosyl transferase family 8
AMAGACPK_02263	3.92e-215	arbZ	-	-	I	-	-	-	Phosphate acyltransferases
AMAGACPK_02264	3.37e-50	-	-	-	S	-	-	-	Cytochrome B5
AMAGACPK_02265	1.38e-107	-	-	-	J	-	-	-	FR47-like protein
AMAGACPK_02266	3.11e-13	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMAGACPK_02267	4.65e-219	-	-	-	L	-	-	-	Bifunctional protein
AMAGACPK_02269	3.84e-113	-	-	-	S	-	-	-	COG NOG38524 non supervised orthologous group
AMAGACPK_02272	2.12e-86	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_02273	2.24e-36	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_02274	1.18e-82	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_02275	4.23e-46	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_02277	3.84e-113	-	-	-	S	-	-	-	COG NOG38524 non supervised orthologous group
AMAGACPK_02278	1.18e-82	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_02279	4.23e-46	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_02280	4.19e-92	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
AMAGACPK_02281	1.05e-289	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
AMAGACPK_02282	6.72e-261	pbpX	-	-	V	-	-	-	Beta-lactamase
AMAGACPK_02283	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
AMAGACPK_02284	0.0	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
AMAGACPK_02285	1.2e-202	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
AMAGACPK_02287	1.44e-07	-	-	-	S	-	-	-	YSIRK type signal peptide
AMAGACPK_02288	2.27e-245	ldhA	1.1.1.28	-	C	ko:K03778,ko:K18347	ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01504	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AMAGACPK_02289	7.01e-103	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
AMAGACPK_02290	1.9e-158	fabI	1.3.1.10, 1.3.1.9	-	I	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl- acyl-carrier-protein reductase NADH
AMAGACPK_02291	2.42e-163	accA	2.1.3.15, 6.4.1.2	-	I	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	alpha subunit
AMAGACPK_02292	4.9e-180	accD	2.1.3.15, 6.4.1.2	-	I	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
AMAGACPK_02293	1.4e-299	accC	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Acetyl-CoA carboxylase biotin carboxylase subunit
AMAGACPK_02294	7.28e-80	fabZ	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	FabA-like domain
AMAGACPK_02295	3.17e-67	accB	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
AMAGACPK_02296	2.53e-268	fabF	2.3.1.179	-	I	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
AMAGACPK_02297	1.4e-137	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	reductase
AMAGACPK_02298	2.77e-177	fabD	2.3.1.39	-	I	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	Malonyl CoA-acyl carrier protein transacylase
AMAGACPK_02299	4.22e-41	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AMAGACPK_02300	1.98e-47	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AMAGACPK_02301	2.32e-25	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AMAGACPK_02302	2.4e-67	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AMAGACPK_02303	8.44e-65	-	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AMAGACPK_02304	1.67e-95	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
AMAGACPK_02305	0.0	-	-	-	L	-	-	-	Transposase
AMAGACPK_02306	1.24e-26	-	-	-	-	-	-	-	-
AMAGACPK_02307	3.21e-244	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMAGACPK_02308	4.59e-55	-	-	-	-	-	-	-	-
AMAGACPK_02309	3.47e-285	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_02311	3.74e-180	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
AMAGACPK_02312	3.16e-192	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	haloacid dehalogenase-like hydrolase
AMAGACPK_02313	0.0	fusA1	-	-	J	-	-	-	elongation factor G
AMAGACPK_02314	9.52e-205	yvgN	-	-	C	-	-	-	Aldo keto reductase
AMAGACPK_02315	7.2e-202	-	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
AMAGACPK_02316	7.75e-170	ysaA	3.1.3.5, 3.8.1.2	-	S	ko:K01560,ko:K07025,ko:K08723	ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
AMAGACPK_02317	3.35e-223	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
AMAGACPK_02318	4.76e-168	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
AMAGACPK_02319	8.64e-176	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
AMAGACPK_02320	1.59e-315	-	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
AMAGACPK_02321	2.55e-26	-	-	-	-	-	-	-	-
AMAGACPK_02322	3.93e-134	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
AMAGACPK_02323	8.87e-226	ydbI	-	-	K	-	-	-	AI-2E family transporter
AMAGACPK_02324	4.65e-120	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
AMAGACPK_02325	3.26e-292	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
AMAGACPK_02326	1.09e-148	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMAGACPK_02327	0.0	-	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
AMAGACPK_02328	5.61e-38	-	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
AMAGACPK_02330	4.23e-46	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_02331	1.18e-82	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_02332	7.15e-68	-	-	-	S	-	-	-	Putative ABC-transporter type IV
AMAGACPK_02333	6.24e-210	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_02334	8.9e-89	-	-	-	S	-	-	-	Putative ABC-transporter type IV
AMAGACPK_02336	6.72e-112	potE	-	-	E	-	-	-	thought to be involved in transport amino acids across the membrane
AMAGACPK_02339	2.67e-35	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
AMAGACPK_02340	6.66e-27	-	-	-	S	-	-	-	CAAX protease self-immunity
AMAGACPK_02342	5.75e-284	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_02343	1.3e-59	-	-	-	K	-	-	-	Helix-turn-helix domain
AMAGACPK_02344	4.82e-144	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
AMAGACPK_02347	2.41e-39	-	-	-	-	-	-	-	-
AMAGACPK_02348	8.17e-284	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_02350	6.56e-86	sagB	-	-	C	-	-	-	Nitroreductase family
AMAGACPK_02351	3.32e-284	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMAGACPK_02352	1.28e-168	-	-	-	L	-	-	-	PFAM transposase IS116 IS110 IS902
AMAGACPK_02353	5.83e-67	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMAGACPK_02354	1.05e-114	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMAGACPK_02355	1.63e-180	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMAGACPK_02356	2.76e-27	-	-	-	V	ko:K01990,ko:K01992	-	ko00000,ko00002,ko02000	Transport permease protein
AMAGACPK_02357	0.0	-	-	-	L	-	-	-	Transposase DDE domain
AMAGACPK_02358	3.27e-69	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
AMAGACPK_02359	3.5e-280	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
AMAGACPK_02360	4.04e-36	-	-	-	-	-	-	-	-
AMAGACPK_02361	1.33e-72	-	-	-	-	-	-	-	-
AMAGACPK_02362	5.28e-180	-	-	-	S	-	-	-	Replication initiation factor
AMAGACPK_02363	1.36e-171	-	-	-	D	-	-	-	Ftsk spoiiie family protein
AMAGACPK_02364	7.06e-110	-	-	-	-	-	-	-	-
AMAGACPK_02365	7.2e-84	-	-	-	-	-	-	-	-
AMAGACPK_02368	3.92e-153	-	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
AMAGACPK_02369	1.37e-287	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
AMAGACPK_02370	2.26e-31	-	-	-	S	-	-	-	Transglycosylase associated protein
AMAGACPK_02371	3.81e-18	-	-	-	S	-	-	-	CsbD-like
AMAGACPK_02372	4.76e-213	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
AMAGACPK_02373	1.23e-170	-	-	-	V	-	-	-	ABC transporter transmembrane region
AMAGACPK_02374	2.26e-215	degV1	-	-	S	-	-	-	DegV family
AMAGACPK_02375	5.56e-217	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, phosphonate, periplasmic substrate-binding protein
AMAGACPK_02376	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
AMAGACPK_02377	3.87e-97	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
AMAGACPK_02378	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
AMAGACPK_02379	1.89e-47	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AMAGACPK_02380	4.83e-104	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
AMAGACPK_02381	6.72e-66	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
AMAGACPK_02382	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AMAGACPK_02383	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AMAGACPK_02384	4.22e-267	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AMAGACPK_02385	1.13e-48	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain protein YaaA
AMAGACPK_02386	8.11e-245	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria