ORF_ID e_value Gene_name EC_number CAZy COGs KEGG_ko KEGG_Pathway BRITE Description
PDDEGFHF_00001 1.24e-305 cas3 - - L ko:K07012 - ko00000,ko01000,ko02048 CRISPR-associated helicase cas3
PDDEGFHF_00002 6.59e-76 rplS - - J ko:K02884 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PDDEGFHF_00003 0.0 - - - E ko:K03294 - ko00000 Amino Acid
PDDEGFHF_00004 2.22e-182 trmD 2.1.1.228 - J ko:K00554 - ko00000,ko01000,ko03016 Belongs to the RNA methyltransferase TrmD family
PDDEGFHF_00005 1.52e-114 rimM - - J ko:K02860 - ko00000,ko03009 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PDDEGFHF_00006 9.17e-54 ylqC - - S ko:K06960 - ko00000 Belongs to the UPF0109 family
PDDEGFHF_00007 4.94e-58 rpsP - - J ko:K02959 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bS16 family
PDDEGFHF_00008 2.78e-158 phoU - - P ko:K02039 - ko00000 Plays a role in the regulation of phosphate uptake
PDDEGFHF_00009 1.28e-176 pstB 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PDDEGFHF_00010 1.74e-195 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphate transport system permease protein PstA
PDDEGFHF_00011 1.37e-195 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
PDDEGFHF_00012 1.1e-202 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 Phosphate
PDDEGFHF_00013 7.18e-170 - - - K ko:K07658 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Transcriptional regulatory protein, C-terminal domain protein
PDDEGFHF_00014 1.41e-40 - - - - - - - -
PDDEGFHF_00015 4.67e-49 - - - - - - - -
PDDEGFHF_00017 0.0 ffh 3.6.5.4 - U ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko01000,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PDDEGFHF_00018 1.72e-75 ylxM - - S ko:K09787 - ko00000 Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PDDEGFHF_00019 9.65e-295 ftsY - - U ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PDDEGFHF_00020 0.0 smc - - D ko:K03529 - ko00000,ko03036 Required for chromosome condensation and partitioning
PDDEGFHF_00021 3.28e-165 rnc 3.1.26.3 - J ko:K03685 ko03008,ko05205,map03008,map05205 ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PDDEGFHF_00022 1.65e-47 acpP - - IQ ko:K02078 - ko00000,ko00001 Carrier of the growing fatty acid chain in fatty acid biosynthesis
PDDEGFHF_00023 2.2e-215 plsX 2.3.1.15 - I ko:K03621 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PDDEGFHF_00024 0.0 recG 3.6.4.12 - L ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PDDEGFHF_00025 0.0 yloV - - S ko:K07030 - ko00000 DAK2 domain fusion protein YloV
PDDEGFHF_00026 7.09e-76 yloU - - S - - - Asp23 family, cell envelope-related function
PDDEGFHF_00027 5.82e-35 rpmB - - J ko:K02902 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL28 family
PDDEGFHF_00028 2.51e-158 thiN 2.7.6.2 - H ko:K00949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 thiamine pyrophosphokinase
PDDEGFHF_00029 1.1e-151 rpe 5.1.3.1 - G ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the ribulose-phosphate 3-epimerase family
PDDEGFHF_00030 9.22e-213 rsgA 3.1.3.100 - S ko:K06949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PDDEGFHF_00031 0.0 prkC 2.7.11.1 - KLT ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 serine threonine protein kinase
PDDEGFHF_00032 1.68e-169 stp 3.1.3.16 - T ko:K20074 - ko00000,ko01000,ko01009 phosphatase
PDDEGFHF_00033 6.4e-315 sun 2.1.1.176 - J ko:K03500 - ko00000,ko01000,ko03009 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PDDEGFHF_00034 5.61e-224 fmt 2.1.2.9 - J ko:K00604 ko00670,ko00970,map00670,map00970 ko00000,ko00001,ko01000 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PDDEGFHF_00035 0.0 priA - - L ko:K04066 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PDDEGFHF_00036 9.67e-274 coaBC 4.1.1.36, 6.3.2.5 - H ko:K01598,ko:K13038 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PDDEGFHF_00037 1.9e-61 rpoZ 2.7.7.6 - K ko:K03060 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PDDEGFHF_00038 1.03e-146 gmk 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Essential for recycling GMP and indirectly, cGMP
PDDEGFHF_00040 0.0 recN - - L ko:K03631 - ko00000,ko03400 May be involved in recombinational repair of damaged DNA
PDDEGFHF_00041 4.92e-99 argR2 - - K ko:K03402 - ko00000,ko03000 Regulates arginine biosynthesis genes
PDDEGFHF_00042 1.14e-189 rrmJ 2.1.1.226, 2.1.1.227 - J ko:K06442 - ko00000,ko01000,ko03009 Ribosomal RNA large subunit methyltransferase J
PDDEGFHF_00043 2.93e-202 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29 - H ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the FPP GGPP synthase family
PDDEGFHF_00044 1.64e-25 xseB 3.1.11.6 - L ko:K03602 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDDEGFHF_00045 0.0 xseA 3.1.11.6 - L ko:K03601 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDDEGFHF_00046 2e-206 folD 1.5.1.5, 3.5.4.9 - F ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PDDEGFHF_00047 9.82e-92 nusB - - K ko:K03625 - ko00000,ko03009,ko03021 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PDDEGFHF_00048 2.1e-94 WQ51_04310 - - S ko:K10947 - ko00000,ko03000 Asp23 family, cell envelope-related function
PDDEGFHF_00049 4.18e-263 pepP 3.4.11.9, 3.4.13.9 - E ko:K01262,ko:K01271 - ko00000,ko01000,ko01002 Creatinase/Prolidase N-terminal domain
PDDEGFHF_00050 8.74e-62 rpmA - - J ko:K02899 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL27 family
PDDEGFHF_00051 1.2e-70 ysxB - - J ko:K07584 - ko00000 Cysteine protease Prp
PDDEGFHF_00052 1.89e-67 rplU - - J ko:K02888 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to 23S rRNA in the presence of protein L20
PDDEGFHF_00053 3.17e-149 - - - K - - - Transcriptional regulator
PDDEGFHF_00055 4.48e-120 - - - S - - - Protein conserved in bacteria
PDDEGFHF_00056 2.34e-226 - - - - - - - -
PDDEGFHF_00057 1.9e-201 - - - - - - - -
PDDEGFHF_00058 4.76e-19 - - - - - - - -
PDDEGFHF_00059 0.0 glnA 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 glutamine synthetase
PDDEGFHF_00060 6.29e-221 miaA 2.5.1.75 - F ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 ko00000,ko00001,ko01000,ko01006,ko03016 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PDDEGFHF_00061 3.51e-33 WQ51_02665 - - S - - - Protein of unknown function (DUF3042)
PDDEGFHF_00062 5.91e-93 yqhL - - P - - - Rhodanese-like protein
PDDEGFHF_00063 1.83e-231 glcK 2.7.1.2 - G ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Glucokinase
PDDEGFHF_00064 1.14e-48 yqgQ - - S - - - Bacterial protein of unknown function (DUF910)
PDDEGFHF_00065 2.38e-148 gluP 3.4.21.105 - S ko:K19225 - ko00000,ko01000,ko01002 Peptidase, S54 family
PDDEGFHF_00066 3.66e-127 fthC 6.3.3.2 - H ko:K01934 ko00670,ko01100,map00670,map01100 ko00000,ko00001,ko01000 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PDDEGFHF_00067 7.58e-30 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL33 family
PDDEGFHF_00068 0.0 pbp2b - - M ko:K00687,ko:K12553,ko:K21465,ko:K21466 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011 Penicillin-binding Protein
PDDEGFHF_00069 0.0 - - - S - - - membrane
PDDEGFHF_00070 1.81e-103 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PDDEGFHF_00071 2.93e-151 udk 2.7.1.48 - F ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 Cytidine monophosphokinase
PDDEGFHF_00072 0.0 pheT 6.1.1.20 - J ko:K01890 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PDDEGFHF_00073 2.58e-252 pheS 6.1.1.20 - J ko:K01889 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PDDEGFHF_00074 1.44e-78 yodB - - K - - - Transcriptional regulator, HxlR family
PDDEGFHF_00075 4.08e-117 XK27_09705 - - S ko:K06950 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
PDDEGFHF_00076 1.84e-180 spoU - - J ko:K03437 - ko00000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDDEGFHF_00077 8.13e-62 acyP 3.6.1.7 - C ko:K01512 ko00620,ko00627,ko01120,map00620,map00627,map01120 ko00000,ko00001,ko01000 Belongs to the acylphosphatase family
PDDEGFHF_00078 2.04e-199 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PDDEGFHF_00079 4.54e-91 def2 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins
PDDEGFHF_00080 5.4e-298 - - - V - - - MatE
PDDEGFHF_00081 0.0 arlS 2.7.13.3 - T ko:K18940 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
PDDEGFHF_00082 1.38e-155 csrR - - K - - - response regulator
PDDEGFHF_00083 7.89e-38 rpmF - - J ko:K02911 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bL32 family
PDDEGFHF_00084 7.99e-126 ylbN - - S ko:K07040 - ko00000 Uncharacterized ACR, COG1399
PDDEGFHF_00085 1.01e-274 ylbM - - S - - - Belongs to the UPF0348 family
PDDEGFHF_00086 4.49e-181 yqeM - - Q - - - Methyltransferase
PDDEGFHF_00087 1.96e-77 rsfS - - J ko:K09710 - ko00000,ko03009 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PDDEGFHF_00088 5.53e-145 yqeK - - H - - - Hydrolase, HD family
PDDEGFHF_00089 2.29e-120 nadD 2.7.7.18 - H ko:K00969 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PDDEGFHF_00090 1.38e-65 yhbY - - J ko:K07574 - ko00000,ko03009 RNA-binding protein
PDDEGFHF_00091 2.29e-275 yqeH - - S ko:K06948 - ko00000,ko03009 Ribosome biogenesis GTPase YqeH
PDDEGFHF_00092 6.88e-125 yqeG - - S ko:K07015 - ko00000 HAD phosphatase, family IIIA
PDDEGFHF_00093 7.57e-33 - - - S - - - Protein of unknown function (DUF1275)
PDDEGFHF_00094 2.58e-24 - - - S - - - Protein of unknown function (DUF1275)
PDDEGFHF_00095 4.67e-75 rplT - - J ko:K02887 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PDDEGFHF_00096 5.22e-37 rpmI - - J ko:K02916 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL35 family
PDDEGFHF_00097 6.95e-111 infC - - J ko:K02520 - ko00000,ko03012,ko03029 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PDDEGFHF_00098 1.08e-220 dnaI - - L ko:K11144 - ko00000,ko03032 Primosomal protein DnaI
PDDEGFHF_00099 0.0 dnaB - - L ko:K03346 - ko00000,ko03032 replication initiation and membrane attachment
PDDEGFHF_00100 3.44e-105 nrdR - - K ko:K07738 - ko00000,ko03000 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PDDEGFHF_00101 4.15e-137 coaE 2.7.1.24 - F ko:K00859 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PDDEGFHF_00102 8.84e-207 fpg 3.2.2.23, 4.2.99.18 - L ko:K10563 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PDDEGFHF_00103 0.0 polA 2.7.7.7 - L ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 ko00000,ko00001,ko01000,ko03032,ko03400 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PDDEGFHF_00104 1.14e-178 yfhR3 - - S ko:K06889 - ko00000 Serine hydrolase (FSH1)
PDDEGFHF_00105 5.05e-146 ybhL - - S ko:K06890 - ko00000 Belongs to the BI1 family
PDDEGFHF_00106 0.0 murC 6.3.2.8 - M ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Belongs to the MurCDEF family
PDDEGFHF_00107 1.11e-152 ytpR - - J ko:K06878 - ko00000 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PDDEGFHF_00108 1.53e-72 ytpP - - CO - - - Thioredoxin
PDDEGFHF_00109 6.83e-76 - - - S - - - Small secreted protein
PDDEGFHF_00110 9.51e-161 trmB 2.1.1.33 - J ko:K03439 - ko00000,ko01000,ko03016 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PDDEGFHF_00111 6.32e-274 ecsB - - U ko:K01992 - ko00000,ko00002,ko02000 ABC transporter
PDDEGFHF_00112 3.68e-171 ecsA - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PDDEGFHF_00113 4.29e-101 hit - - FG ko:K02503 - ko00000,ko04147 histidine triad
PDDEGFHF_00115 6.67e-192 prsA 5.2.1.8 - M ko:K07533 - ko00000,ko01000,ko03110 Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PDDEGFHF_00116 5.23e-230 yhaM - - S ko:K03698 - ko00000,ko01000,ko03019 Metal dependent phosphohydrolases with conserved 'HD' motif.
PDDEGFHF_00117 3.95e-73 yheA - - S - - - Belongs to the UPF0342 family
PDDEGFHF_00118 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M ko:K12555 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 penicillin-binding protein
PDDEGFHF_00119 0.0 argS 6.1.1.19 - J ko:K01887 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Arginyl-tRNA synthetase
PDDEGFHF_00121 4.86e-53 - - - - - - - -
PDDEGFHF_00123 4.24e-257 folP 2.5.1.15 - H ko:K00796 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 dihydropteroate synthase
PDDEGFHF_00124 7.57e-135 folQ 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Ham1 family
PDDEGFHF_00125 8.26e-309 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the folylpolyglutamate synthase family
PDDEGFHF_00126 1.13e-133 folE 2.7.6.3, 3.5.4.16 - F ko:K00950,ko:K01495 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 GTP cyclohydrolase 1
PDDEGFHF_00127 7.52e-121 folK 2.7.6.3 - H ko:K00950 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
PDDEGFHF_00128 9.96e-82 folB 1.13.11.81, 4.1.2.25, 5.1.99.8 - H ko:K01633 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PDDEGFHF_00129 4.99e-153 XK27_07085 - - S ko:K07052 - ko00000 CAAX protease self-immunity
PDDEGFHF_00130 6.39e-235 rbsR - - K ko:K02529 - ko00000,ko03000 Periplasmic binding proteins and sugar binding domain of LacI family
PDDEGFHF_00131 1.21e-143 - - - - - - - -
PDDEGFHF_00132 3.06e-150 dgk2 - - F - - - deoxynucleoside kinase
PDDEGFHF_00133 1.33e-239 - - - NU - - - Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PDDEGFHF_00134 0.0 - - - S - - - Putative peptidoglycan binding domain
PDDEGFHF_00135 1.65e-112 - - - T - - - Belongs to the universal stress protein A family
PDDEGFHF_00136 0.0 pepV 3.5.1.18 - E ko:K01270,ko:K01274,ko:K01439 ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000,ko01002 dipeptidase PepV
PDDEGFHF_00137 9.4e-199 nnrD 4.2.1.136, 5.1.99.6 - H ko:K17758,ko:K17759 - ko00000,ko01000 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PDDEGFHF_00138 4.9e-83 - - - S - - - Domain of unknown function DUF302
PDDEGFHF_00139 0.0 ytgP - - S ko:K03328 - ko00000 Polysaccharide biosynthesis protein
PDDEGFHF_00140 9.88e-57 - - - - - - - -
PDDEGFHF_00141 0.0 leuS 6.1.1.4 - J ko:K01869 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Belongs to the class-I aminoacyl-tRNA synthetase family
PDDEGFHF_00142 9.8e-162 yodM 3.6.1.27 - I ko:K19302 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Acid phosphatase homologues
PDDEGFHF_00143 7.27e-285 proA 1.2.1.41 - E ko:K00147 ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PDDEGFHF_00144 1.87e-180 proB 2.7.2.11 - F ko:K00931 ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PDDEGFHF_00145 3.78e-271 metK 2.5.1.6 - H ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PDDEGFHF_00146 1.84e-63 - - - - - - - -
PDDEGFHF_00147 4.67e-127 tag1 3.2.2.20 - L ko:K01246 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 glycosylase
PDDEGFHF_00148 0.0 - - - EGP - - - Major Facilitator
PDDEGFHF_00149 5.96e-110 perR - - P ko:K03711,ko:K09825 - ko00000,ko03000 Belongs to the Fur family
PDDEGFHF_00150 3.7e-313 cycA - - E ko:K03293,ko:K11737 - ko00000,ko02000 Amino acid permease
PDDEGFHF_00151 3.91e-31 - - - - - - - -
PDDEGFHF_00154 8.7e-116 cas1 - - L ko:K15342 - ko00000,ko02048,ko03400 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PDDEGFHF_00155 3.41e-46 cas2 - - L ko:K09951 - ko00000,ko02048 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PDDEGFHF_00156 6.7e-43 - - - S - - - CRISPR-associated protein (Cas_Csn2)
PDDEGFHF_00158 2.09e-40 - - - I - - - Hydrolase, alpha beta domain protein
PDDEGFHF_00159 1.9e-42 - - - I ko:K01066 - ko00000,ko01000 Esterase lipase
PDDEGFHF_00161 2.2e-126 - - - S - - - integral membrane protein
PDDEGFHF_00162 8.4e-280 - - - L - - - Probable transposase
PDDEGFHF_00163 5.81e-222 ldh 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily. LDH family
PDDEGFHF_00165 4.82e-72 - - - - - - - -
PDDEGFHF_00166 1.54e-226 prmA - - J ko:K02687 - ko00000,ko01000,ko03009 Ribosomal protein L11 methyltransferase
PDDEGFHF_00167 2.59e-175 rsmE 2.1.1.193 - J ko:K09761 - ko00000,ko01000,ko03009 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PDDEGFHF_00168 4.23e-76 - - - - - - - -
PDDEGFHF_00169 0.0 relA 2.7.6.5 - KT ko:K00951 ko00230,map00230 ko00000,ko00001,ko01000 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PDDEGFHF_00170 3.12e-100 dtd - - J ko:K07560 - ko00000,ko01000,ko03016 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PDDEGFHF_00171 5.22e-111 - - - K - - - Transcriptional regulator
PDDEGFHF_00172 8.42e-281 mccB 4.4.1.1, 4.4.1.2, 4.4.1.8 - E ko:K01760,ko:K17217 ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 cystathionine
PDDEGFHF_00173 1.54e-269 metB 2.5.1.48 - E ko:K01739 ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Cys/Met metabolism PLP-dependent enzyme
PDDEGFHF_00175 6.31e-78 yxeM - - ET ko:K16961 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial periplasmic substrate-binding proteins
PDDEGFHF_00176 1.03e-59 yxeL - - K - - - acetyltransferase
PDDEGFHF_00177 1.2e-98 yxeN - - U ko:K02029,ko:K16959,ko:K16962 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, permease protein
PDDEGFHF_00178 6.15e-100 yxeO - - E ko:K16963 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
PDDEGFHF_00179 8.5e-185 hipO2 - - E ko:K01436,ko:K21613 - ko00000,ko01000,ko01002 Peptidase dimerisation domain
PDDEGFHF_00180 3.62e-215 - 4.3.2.2, 5.5.1.2 - F ko:K01756,ko:K01857 ko00230,ko00250,ko00362,ko01100,ko01110,ko01120,ko01130,ko01220,map00230,map00250,map00362,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko00002,ko01000 Adenylosuccinate lyase C-terminus
PDDEGFHF_00181 1.73e-107 - - - S - - - MmgE/PrpD family
PDDEGFHF_00183 3.39e-147 glnP9 - - P ko:K02029 - ko00000,ko00002,ko02000 ABC transporter, permease protein
PDDEGFHF_00184 1.68e-149 glnP7 - - P ko:K02029 - ko00000,ko00002,ko02000 ABC transporter permease
PDDEGFHF_00185 3.4e-174 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PDDEGFHF_00186 3.69e-197 cjaA - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein
PDDEGFHF_00187 1.05e-173 - - - IQ - - - KR domain
PDDEGFHF_00189 4.7e-175 hom 1.1.1.3 - E ko:K00003 ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Homoserine dehydrogenase
PDDEGFHF_00190 1.18e-56 hom 1.1.1.3 - E ko:K00003 ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Homoserine dehydrogenase
PDDEGFHF_00191 1.52e-200 metAA 2.3.1.46 - E ko:K00651 ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Transfers an acetyl group from acetyl-CoA to
PDDEGFHF_00192 0.0 ybgF - - E ko:K02205,ko:K03293,ko:K16235,ko:K16236 - ko00000,ko02000 amino acid
PDDEGFHF_00193 1.6e-220 mmuM 2.1.1.10 - H ko:K00547 ko00270,ko01100,ko01110,map00270,map01100,map01110 ko00000,ko00001,ko01000 homocysteine S-methyltransferase
PDDEGFHF_00194 1.31e-215 - - - G - - - Phosphotransferase enzyme family
PDDEGFHF_00195 1.55e-226 cwlD 3.5.1.28 - M ko:K01448 ko01503,map01503 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 Ami_3
PDDEGFHF_00196 1.8e-249 - 6.3.1.20 - H ko:K03800 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Lipoate-protein ligase
PDDEGFHF_00197 2.81e-314 hisS 6.1.1.21 - J ko:K01892 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 histidyl-tRNA synthetase
PDDEGFHF_00198 0.0 aspS 6.1.1.12 - J ko:K01876 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PDDEGFHF_00199 1.1e-165 - - - F - - - glutamine amidotransferase
PDDEGFHF_00200 3.81e-31 rpsU - - J ko:K02970 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bS21 family
PDDEGFHF_00201 1.52e-93 yqeY - - S ko:K09117 - ko00000 YqeY-like protein
PDDEGFHF_00202 5.01e-228 phoH - - T ko:K06217 - ko00000 phosphate starvation-inducible protein PhoH
PDDEGFHF_00203 8.34e-104 ybeY - - S ko:K07042 - ko00000,ko03009 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PDDEGFHF_00204 7.64e-88 dgkA 2.7.1.107, 2.7.1.66 - M ko:K00887,ko:K00901 ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231 ko00000,ko00001,ko01000 Diacylglycerol kinase
PDDEGFHF_00205 8.91e-218 era - - S ko:K03595 - ko00000,ko03009,ko03029 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PDDEGFHF_00206 1.85e-200 recO - - L ko:K03584 ko03440,map03440 ko00000,ko00001,ko03400 Involved in DNA repair and RecF pathway recombination
PDDEGFHF_00207 3.59e-240 glyQ 6.1.1.14 - J ko:K01878 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 glycyl-tRNA synthetase alpha subunit
PDDEGFHF_00208 0.0 glyS 6.1.1.14 - J ko:K01879 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Glycyl-tRNA synthetase beta subunit
PDDEGFHF_00209 0.0 dnaG - - L ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PDDEGFHF_00210 1.21e-264 sigA - - K ko:K03086 - ko00000,ko03021 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PDDEGFHF_00211 1.99e-199 is18 - - L - - - COG2801 Transposase and inactivated derivatives
PDDEGFHF_00212 2.48e-52 - - - L ko:K07483 - ko00000 Transposase and inactivated derivatives
PDDEGFHF_00213 8.34e-86 isp - - L - - - Transposase
PDDEGFHF_00214 3.06e-100 - - - L - - - MULE transposase domain
PDDEGFHF_00215 2.54e-96 - - - L - - - PFAM Integrase catalytic region
PDDEGFHF_00216 2.28e-57 - - - M - - - Protein of unknown function (DUF3737)
PDDEGFHF_00217 3.02e-61 - - - L - - - MULE transposase domain
PDDEGFHF_00218 0.0 rnjB - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PDDEGFHF_00219 2.71e-207 - - - S - - - Tetratricopeptide repeat
PDDEGFHF_00220 7.02e-288 tuf - - J ko:K02358,ko:K15771 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PDDEGFHF_00221 1.15e-299 tig - - D ko:K03545 - ko00000 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PDDEGFHF_00222 2.06e-297 clpX - - O ko:K03544 ko04112,map04112 ko00000,ko00001,ko03110 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PDDEGFHF_00223 4.39e-139 engB - - D ko:K03978 - ko00000,ko03036 Necessary for normal cell division and for the maintenance of normal septation
PDDEGFHF_00224 5.48e-70 - - - S - - - mazG nucleotide pyrophosphohydrolase
PDDEGFHF_00226 2.3e-173 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PDDEGFHF_00227 0.0 uvrC - - L ko:K03703 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PDDEGFHF_00228 9.56e-317 obg - - S ko:K03979 - ko00000,ko01000,ko03009 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PDDEGFHF_00229 8.64e-225 rnz 3.1.26.11 - J ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PDDEGFHF_00230 1.3e-199 fabG 1.1.1.100 - S ko:K00059,ko:K07124 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Belongs to the short-chain dehydrogenases reductases (SDR) family
PDDEGFHF_00231 0.0 recJ - - L ko:K07462 ko03410,ko03430,ko03440,map03410,map03430,map03440 ko00000,ko00001,ko01000,ko03400 Single-stranded-DNA-specific exonuclease RecJ
PDDEGFHF_00232 8.09e-122 apt 2.4.2.7 - F ko:K00759 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000,ko04147 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PDDEGFHF_00233 1.64e-81 - - - S - - - Domain of unknown function (DUF4440)
PDDEGFHF_00234 7.82e-239 ldhA 1.1.1.28 - C ko:K03778,ko:K18347 ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020 ko00000,ko00001,ko00002,ko01000,ko01504 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDDEGFHF_00235 1.51e-193 mhpD - - Q ko:K02509 ko00350,ko01120,map00350,map01120 ko00000,ko00001,ko01000 hydratase
PDDEGFHF_00236 1.44e-56 - - - K - - - bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
PDDEGFHF_00237 2.7e-126 ydeQ - - S ko:K11748 - ko00000,ko02000 Flavodoxin-like fold
PDDEGFHF_00238 2.24e-27 - - - S - - - Protein conserved in bacteria
PDDEGFHF_00239 3.03e-74 - - - S - - - Antibiotic biosynthesis monooxygenase
PDDEGFHF_00240 6.02e-68 - - - S - - - Sugar efflux transporter for intercellular exchange
PDDEGFHF_00241 2.47e-13 - - - K - - - transcriptional
PDDEGFHF_00242 1.43e-252 gldA 1.1.1.6 - C ko:K00005 ko00561,ko00640,ko01100,map00561,map00640,map01100 ko00000,ko00001,ko01000 dehydrogenase
PDDEGFHF_00243 7.6e-151 - - - IQ - - - Enoyl-(Acyl carrier protein) reductase
PDDEGFHF_00244 2.48e-135 - - - S - - - Bacterial transferase hexapeptide (six repeats)
PDDEGFHF_00247 3.18e-243 - - - EGP - - - Major Facilitator
PDDEGFHF_00248 5.28e-179 - - - L ko:K07497 - ko00000 Transposase and inactivated derivatives
PDDEGFHF_00250 0.0 asnB 6.3.5.4 - E ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 ko00000,ko00001,ko01000,ko01002 Aluminium induced protein
PDDEGFHF_00251 5.38e-19 - 1.1.1.157 - I ko:K00074 ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120 ko00000,ko00001,ko01000 3-hydroxyacyl-CoA dehydrogenase
PDDEGFHF_00253 4.88e-236 fruR3 - - K ko:K02529,ko:K03484 - ko00000,ko03000 Transcriptional regulator, LacI family
PDDEGFHF_00254 9.97e-103 - - - F - - - Nucleoside 2-deoxyribosyltransferase
PDDEGFHF_00255 1.29e-125 - - - - - - - -
PDDEGFHF_00258 2.55e-112 int3 - - L - - - Belongs to the 'phage' integrase family
PDDEGFHF_00260 2.1e-06 - - - S - - - sequence-specific DNA binding
PDDEGFHF_00274 1.62e-18 spxA - - K ko:K16509 - ko00000 Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PDDEGFHF_00277 2.9e-70 - - - K ko:K21903 - ko00000,ko03000 Transcriptional regulator
PDDEGFHF_00278 1.23e-10 - - - C - - - Domain of unknown function (DUF4145)
PDDEGFHF_00279 1.74e-24 - - - L - - - Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PDDEGFHF_00280 2.23e-101 yphH - - S - - - Cupin domain
PDDEGFHF_00282 2.63e-21 - - - L ko:K07482 - ko00000 PFAM Integrase, catalytic core
PDDEGFHF_00283 2.1e-49 yozE - - S - - - Belongs to the UPF0346 family
PDDEGFHF_00284 2.85e-135 ypmS - - S - - - Uncharacterized protein conserved in bacteria (DUF2140)
PDDEGFHF_00285 2.46e-217 - - - E - - - lipolytic protein G-D-S-L family
PDDEGFHF_00286 1.4e-145 cat 2.3.1.79 - S ko:K00661,ko:K18234 - ko00000,ko01000,ko01504 Bacterial transferase hexapeptide (six repeats)
PDDEGFHF_00287 1.69e-277 - 1.1.1.399, 1.1.1.95 - EH ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 D-isomer specific 2-hydroxyacid dehydrogenase
PDDEGFHF_00288 1.34e-197 WQ51_01275 - - S - - - EDD domain protein, DegV family
PDDEGFHF_00289 8.06e-141 hlyIII - - S ko:K11068 - ko00000,ko02042 protein, hemolysin III
PDDEGFHF_00290 4.4e-122 folA 1.5.1.3 - H ko:K00287 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PDDEGFHF_00291 5.32e-244 thyA 2.1.1.45 - F ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PDDEGFHF_00292 0.0 yfmR - - S ko:K15738 - ko00000,ko02000 ABC transporter, ATP-binding protein
PDDEGFHF_00293 1.07e-284 cca 2.7.7.72 - J ko:K00974 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PDDEGFHF_00294 1.29e-211 - - - L - - - Phage integrase, N-terminal SAM-like domain
PDDEGFHF_00295 2.52e-300 XK27_05225 - - S - - - Tetratricopeptide repeat protein
PDDEGFHF_00296 2.65e-53 hup - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PDDEGFHF_00297 1.5e-312 der - - S ko:K03977 - ko00000,ko03009 GTPase that plays an essential role in the late steps of ribosome biogenesis
PDDEGFHF_00298 4.63e-275 rpsA - - J ko:K02945 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein S1
PDDEGFHF_00299 2.29e-153 cmk 2.7.4.25 - F ko:K00945 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the cytidylate kinase family. Type 1 subfamily
PDDEGFHF_00300 4.37e-76 - - - M - - - Lysin motif
PDDEGFHF_00301 0.0 recQ 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
PDDEGFHF_00302 3.83e-254 - - - S - - - Helix-turn-helix domain
PDDEGFHF_00303 2.37e-111 ribU - - U - - - Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PDDEGFHF_00304 1.68e-167 rluB 5.4.99.22 - J ko:K06178 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
PDDEGFHF_00305 3.2e-131 scpB - - D ko:K06024 - ko00000,ko03036 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PDDEGFHF_00306 1.18e-182 scpA - - D ko:K05896 - ko00000,ko03036 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PDDEGFHF_00307 2.23e-89 ribT - - K ko:K02859 - ko00000 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PDDEGFHF_00308 2.98e-175 xerD - - D ko:K04763 - ko00000,ko03036 recombinase XerD
PDDEGFHF_00309 1.04e-213 yitL - - S ko:K00243 - ko00000 S1 domain
PDDEGFHF_00310 0.0 pyk 2.7.1.40 - G ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the pyruvate kinase family
PDDEGFHF_00311 0.0 dnaE 2.7.7.7 - L ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase
PDDEGFHF_00313 1.07e-302 pepT 3.4.11.4 - E ko:K01258 - ko00000,ko01000,ko01002 Cleaves the N-terminal amino acid of tripeptides
PDDEGFHF_00314 2.43e-201 yqfO - - S - - - Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PDDEGFHF_00315 3.4e-163 trmK 2.1.1.217 - S ko:K06967 - ko00000,ko01000,ko03016 SAM-dependent methyltransferase
PDDEGFHF_00316 5.64e-153 ktrA - - P ko:K03499 - ko00000,ko02000 domain protein
PDDEGFHF_00317 3.38e-293 ktrB - - P ko:K03498 - ko00000,ko02000 Potassium uptake protein
PDDEGFHF_00318 1.28e-253 asd 1.2.1.11 - E ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PDDEGFHF_00319 1.97e-277 aspC - - E ko:K00841 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
PDDEGFHF_00320 4.46e-181 dapB 1.17.1.8 - E ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PDDEGFHF_00321 1.09e-223 dapA 4.3.3.7 - E ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PDDEGFHF_00322 1.15e-280 hipO 3.5.1.47 - E ko:K05823 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PDDEGFHF_00323 6.39e-115 dapH 2.3.1.117, 2.3.1.89 - E ko:K00674,ko:K05822 ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PDDEGFHF_00324 0.0 lysA 4.1.1.20 - E ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PDDEGFHF_00325 0.0 lysC 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the aspartokinase family
PDDEGFHF_00326 5.03e-232 dapF 5.1.1.7 - E ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PDDEGFHF_00327 4.95e-216 apbE 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PDDEGFHF_00328 2e-81 tnpA1 - - L - - - PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PDDEGFHF_00329 2.36e-215 - - - G - - - Belongs to the carbohydrate kinase PfkB family
PDDEGFHF_00330 0.0 - - - F ko:K03457 - ko00000 Belongs to the purine-cytosine permease (2.A.39) family
PDDEGFHF_00331 5.15e-246 - - - O - - - ADP-ribosylglycohydrolase
PDDEGFHF_00332 5.17e-100 - 3.6.3.6 - P ko:K01535 ko00190,map00190 ko00000,ko00001,ko01000 ATPase, P-type transporting, HAD superfamily, subfamily IC
PDDEGFHF_00334 1.37e-218 - - - K ko:K20375 ko02024,map02024 ko00000,ko00001,ko03000 Transcriptional activator, Rgg GadR MutR family
PDDEGFHF_00335 0.0 gntK 2.7.1.12 - G ko:K00851 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko01000 Belongs to the FGGY kinase family
PDDEGFHF_00336 2.34e-301 gntP - - EG ko:K03299 - ko00000,ko02000 Gluconate
PDDEGFHF_00337 1.39e-233 - - - K ko:K02525 - ko00000,ko03000 Transcriptional regulator, LacI family
PDDEGFHF_00338 1.59e-80 - - - - - - - -
PDDEGFHF_00339 8.47e-284 aspB 2.6.1.1, 2.6.1.14 - E ko:K00812,ko:K22457 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase
PDDEGFHF_00340 1.69e-124 - - - V - - - VanZ like family
PDDEGFHF_00341 0.0 gshA 6.3.2.2 - H ko:K01919 ko00270,ko00480,ko01100,map00270,map00480,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the glutamate--cysteine ligase type 1 family
PDDEGFHF_00342 2.77e-62 - - - S ko:K07118 - ko00000 NAD(P)H-binding
PDDEGFHF_00343 7.8e-44 nhaK - - P ko:K03316 - ko00000 Sodium proton antiporter
PDDEGFHF_00344 1.01e-99 - - - - - - - -
PDDEGFHF_00345 1.77e-234 - - - - - - - -
PDDEGFHF_00346 1.24e-163 narI 1.7.5.1 - C ko:K00374 ko00910,ko01120,ko02020,map00910,map01120,map02020 ko00000,ko00001,ko00002,ko01000 Nitrate reductase
PDDEGFHF_00347 2.15e-132 narJ - - C ko:K00373 ko02020,map02020 ko00000,ko00001 Nitrate reductase delta subunit
PDDEGFHF_00348 0.0 - 1.7.5.1 - C ko:K00371 ko00910,ko01120,ko02020,map00910,map01120,map02020 ko00000,ko00001,ko00002,ko01000 4Fe-4S dicluster domain
PDDEGFHF_00349 0.0 narZ 1.7.5.1 - C ko:K00370 ko00910,ko01120,ko02020,map00910,map01120,map02020 ko00000,ko00001,ko00002,ko01000 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PDDEGFHF_00350 6.23e-244 moeB 2.7.7.80 - H ko:K21029 ko04122,map04122 ko00000,ko00001,ko01000 ThiF family
PDDEGFHF_00351 2.18e-112 moaB 2.7.7.75 - H ko:K03638 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko01000 May be involved in the biosynthesis of molybdopterin
PDDEGFHF_00352 8.99e-295 moeA 2.10.1.1 - H ko:K03750 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko01000 MoeA N-terminal region (domain I and II)
PDDEGFHF_00353 1.11e-107 moaC 4.6.1.17 - H ko:K03637 ko00790,ko01100,ko04122,map00790,map01100,map04122 ko00000,ko00001,ko01000 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)
PDDEGFHF_00354 7.14e-128 mobA 2.7.7.77 - H ko:K03752 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko01000 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
PDDEGFHF_00355 6.94e-54 - - - - - - - -
PDDEGFHF_00356 8.62e-102 nreA - - T ko:K10851 ko02020,map02020 ko00000,ko00001 GAF domain
PDDEGFHF_00357 9.81e-241 nreB 2.7.13.3 - F ko:K07683 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Sensor histidine kinase
PDDEGFHF_00358 1.83e-150 nreC - - K ko:K07696 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 PFAM regulatory protein LuxR
PDDEGFHF_00359 1.99e-53 - - - - - - - -
PDDEGFHF_00360 1.4e-234 - - - - - - - -
PDDEGFHF_00361 3.49e-217 - - - H - - - geranyltranstransferase activity
PDDEGFHF_00363 7.17e-172 menG 2.1.1.163, 2.1.1.201 - H ko:K03183 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PDDEGFHF_00364 4.73e-210 - - - K ko:K20480 ko02024,map02024 ko00000,ko00001,ko03000 Helix-turn-helix
PDDEGFHF_00365 2.36e-77 - - - S - - - Iron-sulfur cluster assembly protein
PDDEGFHF_00366 6.63e-278 narK - - P ko:K02575 ko00910,map00910 ko00000,ko00001,ko00002,ko02000 Major Facilitator Superfamily
PDDEGFHF_00367 2.37e-249 moaA 4.1.99.22 - H ko:K03639 ko00790,ko01100,ko04122,map00790,map01100,map04122 ko00000,ko00001,ko01000 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
PDDEGFHF_00368 2.34e-47 moaD - - H ko:K03636 ko04122,map04122 ko00000,ko00001 ThiS family
PDDEGFHF_00369 7.91e-95 moaE 2.8.1.12 - H ko:K03635,ko:K21142 ko00790,ko01100,ko04122,map00790,map01100,map04122 ko00000,ko00001,ko01000 MoaE protein
PDDEGFHF_00370 4.76e-75 - - - S - - - Flavodoxin
PDDEGFHF_00371 1.78e-219 fecD - - P ko:K02015 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PDDEGFHF_00372 1.5e-182 fecE 3.6.3.34 - HP ko:K02013 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 AAA domain, putative AbiEii toxin, Type IV TA system
PDDEGFHF_00373 3.8e-293 yumB 1.6.99.3 - C ko:K03885 ko00190,map00190 ko00000,ko00001,ko01000 NADH dehydrogenase
PDDEGFHF_00374 3.62e-72 yitW - - S - - - Iron-sulfur cluster assembly protein
PDDEGFHF_00375 1.04e-26 - - - S - - - Domain of unknown function (DUF1858)
PDDEGFHF_00376 0.0 XK27_04775 - - S ko:K09155 - ko00000 PAS domain
PDDEGFHF_00377 6.79e-183 - - - EG - - - EamA-like transporter family
PDDEGFHF_00378 6.81e-123 - - - M - - - PFAM NLP P60 protein
PDDEGFHF_00379 5.01e-172 yebC - - K - - - Transcriptional regulatory protein
PDDEGFHF_00380 6.95e-182 - - - - - - - -
PDDEGFHF_00381 5.94e-238 ccpA - - K ko:K02529 - ko00000,ko03000 catabolite control protein A
PDDEGFHF_00382 1.08e-272 pepQ 3.4.13.9 - E ko:K01271 - ko00000,ko01000,ko01002 Creatinase/Prolidase N-terminal domain
PDDEGFHF_00383 4.62e-92 - - - - - - - -
PDDEGFHF_00384 5.14e-68 ytxG - - S - - - protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PDDEGFHF_00385 3.54e-199 ykuT - - M ko:K16052,ko:K22044 - ko00000,ko02000 mechanosensitive ion channel
PDDEGFHF_00386 7.14e-193 - - - S - - - haloacid dehalogenase-like hydrolase
PDDEGFHF_00387 3.89e-122 - - - S ko:K07095 - ko00000 Phosphoesterase
PDDEGFHF_00388 1.53e-139 rdgB 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PDDEGFHF_00389 4.3e-188 murI 3.6.1.66, 5.1.1.3 - M ko:K01776,ko:K02428 ko00230,ko00471,ko01100,map00230,map00471,map01100 ko00000,ko00001,ko01000,ko01011 Provides the (R)-glutamate required for cell wall biosynthesis
PDDEGFHF_00390 3.39e-121 yslB - - S - - - Protein of unknown function (DUF2507)
PDDEGFHF_00391 2.17e-285 - - - P - - - Chloride transporter, ClC family
PDDEGFHF_00392 1.66e-71 trxA - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Belongs to the thioredoxin family
PDDEGFHF_00393 0.0 mutS2 - - L ko:K07456 ko03430,map03430 ko00000,ko00001,ko03400 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PDDEGFHF_00394 2.23e-119 cvpA - - S - - - Colicin V production protein
PDDEGFHF_00395 3.2e-211 rnhC 3.1.26.4 - L ko:K03471 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDDEGFHF_00396 3.99e-55 yrzB - - S - - - Belongs to the UPF0473 family
PDDEGFHF_00397 4.97e-97 yrrK - - J ko:K07447 - ko00000,ko01000 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PDDEGFHF_00398 1.06e-57 yrzL - - S - - - Belongs to the UPF0297 family
PDDEGFHF_00399 0.0 alaS 6.1.1.7 - J ko:K01872 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PDDEGFHF_00400 8.44e-301 cshB 3.6.4.13 - JKL ko:K05592,ko:K18692 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PDDEGFHF_00401 3.41e-231 nrnA 3.1.13.3, 3.1.3.7 - S ko:K06881 ko00920,ko01100,ko01120,map00920,map01100,map01120 ko00000,ko00001,ko01000,ko03400 DHHA1 domain protein
PDDEGFHF_00402 9.08e-68 yajC - - U ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase
PDDEGFHF_00403 5.14e-225 - 2.4.2.29 - F ko:K00773 - ko00000,ko01000,ko03016 queuine tRNA-ribosyltransferase activity
PDDEGFHF_00404 3.61e-243 ruvB 3.6.4.12 - L ko:K03551 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PDDEGFHF_00405 1.77e-135 ruvA 3.6.4.12 - L ko:K03550 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PDDEGFHF_00406 0.0 mutL - - L ko:K03572 ko03430,map03430 ko00000,ko00001,ko03400 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PDDEGFHF_00407 0.0 mutS - - L ko:K03555 ko03430,map03430 ko00000,ko00001,ko03400 that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PDDEGFHF_00408 2.27e-305 rny - - S ko:K18682 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Endoribonuclease that initiates mRNA decay
PDDEGFHF_00409 1.36e-245 recA - - L ko:K03553 ko03440,map03440 ko00000,ko00001,ko00002,ko03400 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PDDEGFHF_00410 1.62e-293 cinA 3.5.1.42 - S ko:K03742,ko:K03743 ko00760,map00760 ko00000,ko00001,ko01000 Belongs to the CinA family
PDDEGFHF_00411 1.79e-132 pgsA 2.7.8.5 - I ko:K00995 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PDDEGFHF_00412 4.68e-151 - - - S - - - Helix-turn-helix domain
PDDEGFHF_00413 0.0 ymfH - - S - - - Peptidase M16
PDDEGFHF_00414 4.68e-298 ymfF - - S - - - Peptidase M16 inactive domain protein
PDDEGFHF_00415 1.65e-205 aatB - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein
PDDEGFHF_00416 4.86e-149 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PDDEGFHF_00417 3.81e-142 yecS_2 - - P ko:K02029,ko:K02030 - ko00000,ko00002,ko02000 ABC transporter permease
PDDEGFHF_00418 9.04e-120 mreD - - M ko:K03571 - ko00000,ko03036 rod shape-determining protein MreD
PDDEGFHF_00419 1.37e-187 mreC - - M ko:K03570 - ko00000,ko03036 Involved in formation and maintenance of cell shape
PDDEGFHF_00420 1.34e-232 mreB - - D ko:K03569 - ko00000,ko02048,ko03036,ko04812 cell shape determining protein MreB
PDDEGFHF_00421 5.3e-150 radC - - L ko:K03630 - ko00000 DNA repair protein
PDDEGFHF_00422 5.9e-51 B4168_4126 - - L ko:K07493 - ko00000 Transposase
PDDEGFHF_00423 3.3e-139 - - - P ko:K10716 - ko00000,ko02000 Ion transport protein
PDDEGFHF_00424 5.64e-29 - - - E - - - Zn peptidase
PDDEGFHF_00425 9.89e-24 - - - K - - - Helix-turn-helix
PDDEGFHF_00427 1.56e-139 - - - K - - - Phage regulatory protein
PDDEGFHF_00432 3.44e-33 - - - - - - - -
PDDEGFHF_00433 3.61e-46 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2188)
PDDEGFHF_00438 5.19e-205 - - - L ko:K07455 - ko00000,ko03400 RecT family
PDDEGFHF_00439 1.1e-195 pi112 - - L - - - PDDEXK-like domain of unknown function (DUF3799)
PDDEGFHF_00440 5.71e-121 ssb - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PDDEGFHF_00441 6.17e-33 - - - L - - - Psort location Cytoplasmic, score
PDDEGFHF_00445 4.09e-59 - - - L ko:K07474 - ko00000 Terminase small subunit
PDDEGFHF_00447 6.86e-190 yqaT - - S ko:K06909 - ko00000 Phage terminase, large subunit
PDDEGFHF_00448 4.44e-186 - - - S - - - Phage portal protein
PDDEGFHF_00449 5.88e-179 - - - K - - - cell adhesion
PDDEGFHF_00452 5.46e-39 - - - S - - - aminoacyl-tRNA ligase activity
PDDEGFHF_00453 2.84e-115 - - - - - - - -
PDDEGFHF_00454 1.24e-45 - - - S - - - Phage gp6-like head-tail connector protein
PDDEGFHF_00456 2.41e-31 - - - S - - - Bacteriophage HK97-gp10, putative tail-component
PDDEGFHF_00458 9.94e-87 - - - S - - - Phage major tail protein 2
PDDEGFHF_00459 3.27e-35 - - - S - - - Pfam:Phage_TAC_12
PDDEGFHF_00460 6.19e-35 - - - - - - - -
PDDEGFHF_00461 2.37e-80 - - - D - - - Phage tail tape measure protein, TP901 family
PDDEGFHF_00462 2.26e-91 - - - S - - - Phage tail protein
PDDEGFHF_00463 1.95e-280 - - - S - - - peptidoglycan catabolic process
PDDEGFHF_00467 3.12e-157 - - - M - - - lysozyme activity
PDDEGFHF_00468 5.9e-129 - - - S - - - Psort location Cytoplasmic, score 8.96
PDDEGFHF_00469 3.05e-174 - - - L - - - Psort location Cytoplasmic, score
PDDEGFHF_00470 3.47e-51 comGC - - U ko:K02245 - ko00000,ko00002,ko02044 competence protein ComGC
PDDEGFHF_00475 2.51e-202 ytxK 2.1.1.72 - L ko:K00571 - ko00000,ko01000,ko02048 N-6 DNA Methylase
PDDEGFHF_00476 9.57e-287 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PDDEGFHF_00477 2.73e-147 - - - S - - - Calcineurin-like phosphoesterase
PDDEGFHF_00478 9.43e-127 yutD - - S - - - Protein of unknown function (DUF1027)
PDDEGFHF_00479 1.01e-182 nagD 3.1.3.41 - G ko:K01101 ko00627,ko01120,map00627,map01120 ko00000,ko00001,ko01000 Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PDDEGFHF_00480 7.86e-20 - - - S - - - Protein of unknown function (DUF1461)
PDDEGFHF_00481 8.3e-142 dedA - - S ko:K03975 - ko00000 SNARE-like domain protein
PDDEGFHF_00482 3.82e-23 - - - - - - - -
PDDEGFHF_00483 1.31e-244 gap 1.2.1.12 - G ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PDDEGFHF_00484 8.52e-287 pgk 2.7.2.3 - F ko:K00927 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the phosphoglycerate kinase family
PDDEGFHF_00485 2.92e-184 tpiA 5.3.1.1 - G ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PDDEGFHF_00486 0.0 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PDDEGFHF_00487 0.0 yifK - - E ko:K03293 - ko00000 Amino acid permease
PDDEGFHF_00488 0.0 eriC - - P ko:K03281 - ko00000 chloride
PDDEGFHF_00489 6.82e-46 secG - - U ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase
PDDEGFHF_00490 0.0 rnr - - J ko:K12573 ko03018,map03018 ko00000,ko00001,ko01000,ko03016,ko03019 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PDDEGFHF_00491 4.66e-110 smpB - - J ko:K03664 - ko00000 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PDDEGFHF_00492 3.91e-138 - - - - - - - -
PDDEGFHF_00493 1.52e-173 ung 3.2.2.27 - L ko:K03648 ko03410,ko05340,map03410,map05340 ko00000,ko00001,ko01000,ko03400 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PDDEGFHF_00494 9.74e-229 pta 2.3.1.8, 3.6.3.21 - C ko:K00625,ko:K02028 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000,ko02000 phosphate acetyltransferase
PDDEGFHF_00495 4.21e-105 ydiB - - O ko:K06925 - ko00000,ko03016 Hydrolase, P-loop family
PDDEGFHF_00496 6.43e-117 - - - K - - - Acetyltransferase (GNAT) domain
PDDEGFHF_00497 4e-133 dnaQ 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
PDDEGFHF_00498 2.34e-212 murB 1.3.1.98 - M ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation
PDDEGFHF_00499 1.61e-192 dacA 2.7.7.85 - S ko:K18672 - ko00000,ko01000 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PDDEGFHF_00500 2.4e-151 ybbR - - S - - - YbbR-like protein
PDDEGFHF_00501 0.0 glmM 5.4.2.10 - G ko:K03431 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko01000 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PDDEGFHF_00502 0.0 glmS 2.6.1.16 - M ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 ko00000,ko00001,ko01000,ko01002 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PDDEGFHF_00503 4.4e-69 - - - - - - - -
PDDEGFHF_00504 1.17e-262 oatA - - I - - - Acyltransferase
PDDEGFHF_00505 2.13e-193 XK27_02985 - - S - - - Sucrose-6F-phosphate phosphohydrolase
PDDEGFHF_00506 4.69e-106 lytE - - M - - - Lysin motif
PDDEGFHF_00507 6.96e-222 - - - S - - - Conserved hypothetical protein 698
PDDEGFHF_00508 6.02e-216 - - - K - - - LysR substrate binding domain
PDDEGFHF_00509 3.15e-163 manA 5.3.1.8 - G ko:K01809 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 mannose-6-phosphate isomerase
PDDEGFHF_00510 7.71e-192 yitS - - S - - - EDD domain protein, DegV family
PDDEGFHF_00511 8.77e-117 - - - K - - - Domain of unknown function (DUF1836)
PDDEGFHF_00512 1.5e-231 ywbN - - P ko:K07223,ko:K16301 - ko00000,ko01000,ko02000 Peroxidase
PDDEGFHF_00513 1.82e-230 manL 2.7.1.191, 2.7.1.202 - G ko:K02769,ko:K02793,ko:K02794 ko00051,ko00520,ko01100,ko01120,ko02060,map00051,map00520,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system sorbose subfamily IIB component
PDDEGFHF_00514 6.53e-162 manY - - G ko:K02746,ko:K02795 ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system
PDDEGFHF_00515 3.89e-195 manN - - G ko:K02796 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 system, mannose fructose sorbose family IID component
PDDEGFHF_00516 1.8e-76 manO - - S - - - Domain of unknown function (DUF956)
PDDEGFHF_00518 5.65e-170 yclJ - - K ko:K02483 - ko00000,ko02022 response regulator
PDDEGFHF_00519 0.0 yclK - - T - - - Histidine kinase
PDDEGFHF_00520 1.24e-196 - - - U ko:K05340 - ko00000,ko02000 sugar transport
PDDEGFHF_00523 3.69e-168 yycF - - K ko:K07668 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 response regulator
PDDEGFHF_00524 0.0 vicK 2.7.13.3 - T ko:K07652 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
PDDEGFHF_00525 4.42e-307 yycH - - S - - - YycH protein
PDDEGFHF_00526 5.86e-185 yycI - - S - - - YycH protein
PDDEGFHF_00527 5.49e-197 vicX 3.1.26.11 - S ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 domain protein
PDDEGFHF_00528 9.52e-270 htrA 3.4.21.107 - O ko:K04771 ko01503,ko02020,map01503,map02020 ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 serine protease
PDDEGFHF_00529 1.43e-105 rlmH 2.1.1.177 - J ko:K00783 - ko00000,ko01000,ko03009 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PDDEGFHF_00530 3.03e-94 ywnA - - K - - - Transcriptional regulator
PDDEGFHF_00531 2.68e-224 malR1 - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator, LacI family
PDDEGFHF_00532 0.0 malT - - G ko:K16211 - ko00000,ko02000 Major Facilitator
PDDEGFHF_00533 0.0 mapA 2.4.1.8 GH65 G ko:K00691 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 hydrolase, family 65, central catalytic
PDDEGFHF_00534 7.69e-150 pgmB 5.4.2.6 - S ko:K01838 ko00500,map00500 ko00000,ko00001,ko01000 beta-phosphoglucomutase
PDDEGFHF_00536 4.98e-20 ysdB - - S ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PDDEGFHF_00537 2.97e-244 - 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PDDEGFHF_00538 3.85e-233 - - - D ko:K06889 - ko00000 Alpha beta
PDDEGFHF_00539 1.97e-231 ldhD 1.1.1.28 - CH ko:K03778 ko00620,ko01120,map00620,map01120 ko00000,ko00001,ko01000 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDDEGFHF_00540 3.98e-277 - - - E ko:K00841 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
PDDEGFHF_00541 1.15e-47 - - - - - - - -
PDDEGFHF_00542 0.0 clpE - - O ko:K03697,ko:K04086 - ko00000,ko03110 associated with various cellular activities
PDDEGFHF_00543 0.0 cls - - I ko:K06131 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PDDEGFHF_00544 0.0 rexB 3.6.4.12 - L ko:K16899 - ko00000,ko01000,ko03400 The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PDDEGFHF_00545 0.0 addA 3.6.4.12 - L ko:K16898 - ko00000,ko01000,ko03400 ATP-dependent helicase nuclease subunit A
PDDEGFHF_00546 1.26e-210 - - - C - - - Aldo keto reductase
PDDEGFHF_00547 0.0 glpQ4 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 phosphodiesterase
PDDEGFHF_00548 3.67e-86 yusI 1.20.4.1 - P ko:K00537 - ko00000,ko01000 Belongs to the ArsC family
PDDEGFHF_00549 1.3e-243 - - - V ko:K01992 - ko00000,ko00002,ko02000 ABC transporter
PDDEGFHF_00550 6.55e-166 ybhF_2 - - V ko:K01990 - ko00000,ko00002,ko02000 AAA domain, putative AbiEii toxin, Type IV TA system
PDDEGFHF_00551 4.91e-56 - - - K - - - transcriptional regulator
PDDEGFHF_00552 3.02e-61 - - - L - - - MULE transposase domain
PDDEGFHF_00553 2.63e-135 - - - S - - - Domain of unknown function (DUF4432)
PDDEGFHF_00554 2.57e-224 rbsK 2.7.1.15 - H ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PDDEGFHF_00555 0.0 - - - G ko:K02775 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system Galactitol-specific IIC component
PDDEGFHF_00556 1.65e-241 - - - K ko:K02525 - ko00000,ko03000 helix_turn _helix lactose operon repressor
PDDEGFHF_00557 0.0 potE - - E - - - Amino Acid
PDDEGFHF_00559 0.0 xfp 4.1.2.22, 4.1.2.9 - G ko:K01621 ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120 ko00000,ko00001,ko01000 Phosphoketolase
PDDEGFHF_00560 4.33e-191 - - - S - - - haloacid dehalogenase-like hydrolase
PDDEGFHF_00561 3.81e-169 gntR - - K - - - UbiC transcription regulator-associated domain protein
PDDEGFHF_00562 4.23e-115 ebsC - - J ko:K03976 - ko00000,ko01000,ko03016 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PDDEGFHF_00563 3.78e-167 - - - - - - - -
PDDEGFHF_00564 0.0 pepD2 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
PDDEGFHF_00565 1.07e-198 - - - G - - - Xylose isomerase domain protein TIM barrel
PDDEGFHF_00566 9.84e-112 - - - K - - - Domain of unknown function (DUF1836)
PDDEGFHF_00567 3.4e-116 - - - GM - - - epimerase
PDDEGFHF_00568 0.0 yhdP - - S - - - Transporter associated domain
PDDEGFHF_00569 3.57e-108 nrdI - - F ko:K03647 - ko00000 Belongs to the NrdI family
PDDEGFHF_00570 5.2e-98 - - - S ko:K04750 - ko00000 3-demethylubiquinone-9 3-methyltransferase
PDDEGFHF_00571 1.71e-264 yycB - - P ko:K03449 - ko00000,ko02000 Transporter, major facilitator family protein
PDDEGFHF_00572 0.0 zwf 1.1.1.363, 1.1.1.49 - G ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PDDEGFHF_00573 0.0 gnd 1.1.1.343, 1.1.1.44 - H ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PDDEGFHF_00574 3.03e-106 usp5 - - T - - - universal stress protein
PDDEGFHF_00575 3.07e-103 - - - K ko:K03719 - ko00000,ko03000,ko03036 AsnC family
PDDEGFHF_00576 1.05e-177 kduD 1.1.1.127 - IQ ko:K00065 ko00040,map00040 ko00000,ko00001,ko01000 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PDDEGFHF_00577 1.01e-230 - - - K ko:K02525 - ko00000,ko03000 helix_turn _helix lactose operon repressor
PDDEGFHF_00578 0.0 pepF - - E ko:K08602 - ko00000,ko01000,ko01002 oligoendopeptidase F
PDDEGFHF_00579 3.18e-299 gltT - - U ko:K03309,ko:K11102 - ko00000,ko02000 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PDDEGFHF_00580 2.51e-160 - - - S - - - Membrane
PDDEGFHF_00581 1.9e-39 - - - L ko:K07483 - ko00000 Transposase
PDDEGFHF_00582 3.71e-187 - - - L - - - 4.5 Transposon and IS
PDDEGFHF_00583 0.0 dld 1.1.5.12 - C ko:K03777 ko00620,ko01120,map00620,map01120 ko00000,ko00001,ko01000 D-lactate dehydrogenase, membrane binding
PDDEGFHF_00584 9e-29 - - - L ko:K07497 - ko00000 hmm pf00665
PDDEGFHF_00585 5.92e-157 ribB 3.5.4.25, 4.1.99.12 - H ko:K14652 ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PDDEGFHF_00587 2.97e-51 B4168_4126 - - L ko:K07493 - ko00000 Transposase
PDDEGFHF_00588 0.0 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
PDDEGFHF_00590 0.0 glpK 2.7.1.30 - F ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 ko00000,ko00001,ko01000,ko04147 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PDDEGFHF_00591 4.64e-36 dmpI 5.3.2.6 - G ko:K01821 ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220 ko00000,ko00001,ko00002,ko01000 Belongs to the 4-oxalocrotonate tautomerase family
PDDEGFHF_00592 0.0 yjbQ - - P ko:K03455,ko:K03499 - ko00000,ko02000 TrkA C-terminal domain protein
PDDEGFHF_00593 0.0 pepD4 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
PDDEGFHF_00594 8.79e-208 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
PDDEGFHF_00595 8.22e-305 pts13C - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDDEGFHF_00596 3.52e-57 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PDDEGFHF_00597 1.53e-214 prpA3 3.1.3.16 - T ko:K01090 - ko00000,ko01000 Calcineurin-like phosphoesterase superfamily domain
PDDEGFHF_00598 4.59e-202 - - - EGP ko:K18934 - ko00000,ko02000 Major Facilitator Superfamily
PDDEGFHF_00599 1.8e-271 mdtG2 - - EGP ko:K08161 - ko00000,ko02000 Transporter, major facilitator family protein
PDDEGFHF_00600 0.0 yhdP - - S - - - Transporter associated domain
PDDEGFHF_00601 5.38e-273 - - - EGP ko:K08196 - ko00000,ko02000 Major Facilitator
PDDEGFHF_00602 5.18e-17 rlrB - - K - - - LysR substrate binding domain protein
PDDEGFHF_00603 2.06e-68 lysR - - K - - - Transcriptional regulator
PDDEGFHF_00604 2.58e-276 - - - E - - - GDSL-like Lipase/Acylhydrolase family
PDDEGFHF_00605 1.67e-248 lplA 6.3.1.20 - H ko:K03800 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Lipoate-protein ligase
PDDEGFHF_00606 0.0 pdhD 1.8.1.4 - C ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 Dehydrogenase
PDDEGFHF_00607 6.74e-270 pdhC 2.3.1.12 - C ko:K00627 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PDDEGFHF_00608 1.75e-227 pdhB 1.2.4.1 - C ko:K00162 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 br01601,ko00000,ko00001,ko00002,ko01000 Transketolase, C-terminal domain protein
PDDEGFHF_00609 2.83e-231 pdhA 1.2.4.1 - C ko:K00161 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 br01601,ko00000,ko00001,ko00002,ko01000 Dehydrogenase E1 component
PDDEGFHF_00610 5.26e-14 yphJ 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 decarboxylase
PDDEGFHF_00611 1.48e-42 yphJ 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 decarboxylase
PDDEGFHF_00612 7.76e-72 azlD - - E - - - Branched-chain amino acid transport
PDDEGFHF_00613 2.07e-116 azlC - - E - - - azaleucine resistance protein AzlC
PDDEGFHF_00614 0.0 thrC 4.2.3.1 - E ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Threonine synthase
PDDEGFHF_00615 1.77e-298 hom 1.1.1.3 - E ko:K00003 ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 homoserine dehydrogenase
PDDEGFHF_00616 9.87e-203 thrB 2.7.1.39 - F ko:K00872 ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PDDEGFHF_00617 8.44e-128 - - - K - - - Acetyltransferase (GNAT) domain
PDDEGFHF_00618 1.02e-145 ylbE - - GM - - - NAD(P)H-binding
PDDEGFHF_00619 3.04e-154 yagB - - S ko:K06950 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
PDDEGFHF_00620 1.01e-171 yaaA - - S ko:K09861 - ko00000 Belongs to the UPF0246 family
PDDEGFHF_00621 8.01e-129 - - - - - - - -
PDDEGFHF_00622 6.96e-206 - - - S - - - EDD domain protein, DegV family
PDDEGFHF_00623 0.0 FbpA - - K - - - Fibronectin-binding protein
PDDEGFHF_00624 1.65e-107 - - - L ko:K07491 - ko00000 Transposase IS200 like
PDDEGFHF_00625 1.25e-240 ykpB 1.1.1.169 - H ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PDDEGFHF_00626 1.08e-289 mtnE - - E ko:K08969 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
PDDEGFHF_00627 1.06e-188 mtnU 3.5.1.3 - S ko:K13566 ko00250,map00250 ko00000,ko00001,ko01000 Carbon-nitrogen hydrolase
PDDEGFHF_00628 3.11e-219 galU 2.7.7.9 - M ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 UTP-glucose-1-phosphate uridylyltransferase
PDDEGFHF_00629 9.09e-236 gpsA 1.1.1.94 - I ko:K00057 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 Glycerol-3-phosphate dehydrogenase
PDDEGFHF_00630 3.09e-208 lgt - - M ko:K13292 - ko00000,ko01000 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PDDEGFHF_00631 1.13e-225 hprK - - F ko:K06023 - ko00000,ko01000 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PDDEGFHF_00632 4.15e-69 yvlD - - S ko:K08972 - ko00000 Mycobacterial 4 TMS phage holin, superfamily IV
PDDEGFHF_00633 1.97e-70 - - - KT ko:K03973 - ko00000,ko02048,ko03000 PspC domain protein
PDDEGFHF_00634 2.5e-258 prfB - - J ko:K02836 - ko00000,ko03012 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PDDEGFHF_00635 0.0 secA - - U ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PDDEGFHF_00636 4.64e-124 hpf - - J ko:K05808 - ko00000,ko03009 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PDDEGFHF_00637 3.57e-165 comFC - - S ko:K02242 - ko00000,ko00002,ko02044 Competence protein
PDDEGFHF_00638 0.0 comFA - - L ko:K02240 - ko00000,ko00002,ko02044 Helicase C-terminal domain protein
PDDEGFHF_00639 5.69e-147 yvyE 3.4.13.9 - S ko:K01271 - ko00000,ko01000,ko01002 YigZ family
PDDEGFHF_00640 4.12e-50 - - - - - - - -
PDDEGFHF_00641 0.0 ydaO - - E - - - amino acid
PDDEGFHF_00642 0.0 groL - - O ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PDDEGFHF_00643 1.15e-57 groS - - O ko:K04078 - ko00000,ko03029,ko03110 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PDDEGFHF_00644 8.05e-149 rex - - K ko:K01926 - ko00000,ko03000 Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PDDEGFHF_00645 0.0 ydiF - - S ko:K06158 - ko00000,ko03012 ABC transporter, ATP-binding protein
PDDEGFHF_00646 1.04e-224 birA 6.3.4.15 - H ko:K03524 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko01000,ko03000 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PDDEGFHF_00647 1.67e-117 bioY - - S ko:K03523 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 BioY family
PDDEGFHF_00648 1.55e-174 fabI 1.3.1.10, 1.3.1.9 - I ko:K00208 ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Enoyl- acyl-carrier-protein reductase NADH
PDDEGFHF_00649 4.46e-180 accA 2.1.3.15, 6.4.1.2 - I ko:K01962 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 alpha subunit
PDDEGFHF_00650 1.78e-203 accD 2.1.3.15, 6.4.1.2 - I ko:K01963 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PDDEGFHF_00651 0.0 accC 6.3.4.14, 6.4.1.2 - I ko:K01961 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Acetyl-CoA carboxylase biotin carboxylase subunit
PDDEGFHF_00652 1.13e-97 fabZ 4.2.1.59 - I ko:K02372 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PDDEGFHF_00653 3.46e-94 accB - - I ko:K02160 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PDDEGFHF_00654 1.32e-291 fabF 2.3.1.179 - I ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PDDEGFHF_00655 2.67e-165 fabG 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 reductase
PDDEGFHF_00656 6.22e-216 fabD 2.3.1.39 - I ko:K00645,ko:K15327,ko:K15329 ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004,ko01008 Malonyl CoA-acyl carrier protein transacylase
PDDEGFHF_00657 4.18e-46 acpP - - IQ ko:K02078 - ko00000,ko00001 Carrier of the growing fatty acid chain in fatty acid biosynthesis
PDDEGFHF_00658 2.18e-218 fabH 2.3.1.180 - I ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PDDEGFHF_00659 1.32e-97 - - - K - - - Transcriptional regulator, MarR family
PDDEGFHF_00660 3.83e-100 fabZ 4.2.1.59 - I ko:K02372 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PDDEGFHF_00662 3.65e-250 tsaD 2.3.1.234 - J ko:K01409 - ko00000,ko01000,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PDDEGFHF_00663 5.55e-143 rimI 2.3.1.128 - K ko:K03789 - ko00000,ko01000,ko03009 Ribosomal-protein-alanine acetyltransferase
PDDEGFHF_00664 1.68e-168 yeaZ 2.3.1.234 - O ko:K01409,ko:K14742 - ko00000,ko01000,ko03016 Universal bacterial protein YeaZ
PDDEGFHF_00665 1.61e-274 arcT - - E - - - Aminotransferase
PDDEGFHF_00666 4.65e-279 metE 2.1.1.14 - E ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 methionine synthase, vitamin-B12 independent
PDDEGFHF_00667 0.0 arcD - - E ko:K03758 - ko00000,ko02000 Arginine ornithine antiporter
PDDEGFHF_00668 3.45e-305 arcA 3.5.3.6 - E ko:K01478 ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130 ko00000,ko00001,ko01000 Arginine
PDDEGFHF_00669 3.35e-217 arcC 2.7.2.2 - E ko:K00926 ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200 ko00000,ko00001,ko01000 Belongs to the carbamate kinase family
PDDEGFHF_00670 2.08e-239 argF 2.1.3.3 - E ko:K00611 ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PDDEGFHF_00671 1.35e-203 - - - KT ko:K07719 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 YcbB domain
PDDEGFHF_00672 8.55e-247 galE 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family
PDDEGFHF_00673 1.67e-221 ppx 3.6.1.11, 3.6.1.40 - FP ko:K01524 ko00230,map00230 ko00000,ko00001,ko01000 exopolyphosphatase
PDDEGFHF_00674 0.0 ppk 2.7.4.1 - P ko:K00937 ko00190,ko03018,map00190,map03018 ko00000,ko00001,ko01000,ko03019 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PDDEGFHF_00675 0.0 ppx3 3.6.1.11, 3.6.1.40 - FP ko:K01524 ko00230,map00230 ko00000,ko00001,ko01000 exopolyphosphatase
PDDEGFHF_00676 3.31e-188 fat 3.1.2.21 - I ko:K01071 ko00061,ko01100,map00061,map01100 ko00000,ko00001,ko01000,ko01004 Acyl-ACP thioesterase
PDDEGFHF_00677 2.83e-202 rsmI 2.1.1.198 - H ko:K07056 - ko00000,ko01000,ko03009 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PDDEGFHF_00678 2.47e-74 yabA - - L - - - Involved in initiation control of chromosome replication
PDDEGFHF_00679 5.8e-248 holB 2.7.7.7 - L ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
PDDEGFHF_00680 2.25e-70 yaaQ - - S - - - Cyclic-di-AMP receptor
PDDEGFHF_00681 2.41e-149 tmk 2.7.4.9 - F ko:K00943 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PDDEGFHF_00682 2.06e-28 - - - S - - - Protein of unknown function (DUF2508)
PDDEGFHF_00683 6.48e-142 recR - - L ko:K06187 ko03440,map03440 ko00000,ko00001,ko03400 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PDDEGFHF_00684 3.97e-60 yaaK - - S ko:K09747 - ko00000 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PDDEGFHF_00685 0.0 dnaX 2.7.7.7 - L ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PDDEGFHF_00687 1.5e-112 tadA 3.5.4.33 - F ko:K11991 - ko00000,ko01000,ko03016 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PDDEGFHF_00688 6.56e-48 nrdH - - O ko:K06191 - ko00000 Glutaredoxin
PDDEGFHF_00689 0.0 nrdE 1.17.4.1 - F ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDDEGFHF_00690 1.48e-248 nrdF 1.17.4.1 - F ko:K00526 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDDEGFHF_00691 0.0 brnQ - - U ko:K03311 - ko00000 Component of the transport system for branched-chain amino acids
PDDEGFHF_00692 0.0 adhE 1.1.1.1, 1.2.1.10 - C ko:K04072 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 belongs to the iron- containing alcohol dehydrogenase family
PDDEGFHF_00693 0.0 cydD - - CO ko:K16012 ko02010,map02010 ko00000,ko00001,ko02000 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
PDDEGFHF_00694 0.0 cydC - - CO ko:K16013 ko02010,map02010 ko00000,ko00001,ko02000 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PDDEGFHF_00695 4.17e-237 cydB 1.10.3.14 - C ko:K00426 ko00190,ko01100,ko02020,map00190,map01100,map02020 ko00000,ko00001,ko00002,ko01000 Cytochrome d ubiquinol oxidase subunit II
PDDEGFHF_00696 0.0 cydA 1.10.3.14 - C ko:K00425 ko00190,ko01100,ko02020,map00190,map01100,map02020 ko00000,ko00001,ko00002,ko01000 ubiquinol oxidase
PDDEGFHF_00697 8.24e-71 rplL - - J ko:K02935 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PDDEGFHF_00698 3.88e-107 rplJ - - J ko:K02864 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PDDEGFHF_00699 3.15e-312 steT - - E ko:K03294 - ko00000 amino acid
PDDEGFHF_00701 1.69e-155 tkt 2.2.1.1 - H ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PDDEGFHF_00702 5.46e-161 rpiA 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PDDEGFHF_00703 6.86e-175 tal 2.2.1.2 - H ko:K00616 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Transaldolase/Fructose-6-phosphate aldolase
PDDEGFHF_00704 0.0 tkt 2.2.1.1 - H ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PDDEGFHF_00705 2.72e-314 glpT - - G ko:K02445 - ko00000,ko02000 Major Facilitator Superfamily
PDDEGFHF_00706 3.45e-175 hflC - - O ko:K04087 - ko00000,ko00002,ko01000 prohibitin homologues
PDDEGFHF_00708 2.16e-98 uspA3 - - T - - - universal stress protein
PDDEGFHF_00709 6.25e-78 - - - - - - - -
PDDEGFHF_00710 1.25e-09 - - - - - - - -
PDDEGFHF_00711 1.92e-203 - - - - - - - -
PDDEGFHF_00712 2.22e-98 - - - K - - - Transcriptional regulator
PDDEGFHF_00713 1.7e-236 ybcH - - D ko:K06889 - ko00000 Alpha beta
PDDEGFHF_00714 2.23e-94 - - - O - - - OsmC-like protein
PDDEGFHF_00715 8.24e-248 lplL 6.3.1.20 - H ko:K03800 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Bacterial lipoate protein ligase C-terminus
PDDEGFHF_00716 0.0 nhaK - - P ko:K03316 - ko00000 Sodium proton antiporter
PDDEGFHF_00717 1.78e-22 - - - - - - - -
PDDEGFHF_00718 1.06e-149 - - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Cobalt transport protein
PDDEGFHF_00719 0.0 - - - S ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PDDEGFHF_00720 1.17e-130 ykoE - - S ko:K16925 - ko00000,ko00002,ko02000 ABC-type cobalt transport system, permease component
PDDEGFHF_00721 2.69e-228 iunH1 3.2.2.1 - F ko:K01239 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 nucleoside hydrolase
PDDEGFHF_00722 1.51e-235 yumC 1.18.1.2, 1.19.1.1 - C ko:K21567 - ko00000,ko01000 Ferredoxin--NADP reductase
PDDEGFHF_00723 5.94e-43 cadA 3.6.3.3, 3.6.3.5 - P ko:K01534 - ko00000,ko01000 P-type ATPase
PDDEGFHF_00724 6.4e-313 cadA 3.6.3.3, 3.6.3.5 - P ko:K01534 - ko00000,ko01000 P-type ATPase
PDDEGFHF_00725 9.17e-45 copZ - - P - - - Heavy-metal-associated domain
PDDEGFHF_00726 8.02e-130 dpsB - - P - - - Belongs to the Dps family
PDDEGFHF_00727 3.81e-142 flp - - K ko:K21562 - ko00000,ko03000 helix_turn_helix, cAMP Regulatory protein
PDDEGFHF_00728 7.51e-110 - - - - - - - -
PDDEGFHF_00729 0.0 ltaS 2.7.8.20 - M ko:K19005 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PDDEGFHF_00730 3.31e-162 pgm3 - - G - - - phosphoglycerate mutase family
PDDEGFHF_00731 5.85e-192 qorB 1.6.5.2 - GM ko:K19267 ko00130,ko01110,map00130,map01110 ko00000,ko00001,ko01000 NmrA-like family
PDDEGFHF_00732 2.15e-299 pbuX - - F ko:K03458,ko:K16169 - ko00000,ko02000 xanthine permease
PDDEGFHF_00733 3.77e-217 corA - - P ko:K03284 - ko00000,ko02000 CorA-like Mg2+ transporter protein
PDDEGFHF_00734 1.42e-215 rluA 5.4.99.23, 5.4.99.28, 5.4.99.29 - J ko:K06177,ko:K06180 - ko00000,ko01000,ko03009,ko03016 Responsible for synthesis of pseudouridine from uracil
PDDEGFHF_00735 3.51e-183 yceF - - P ko:K05794 - ko00000 membrane
PDDEGFHF_00736 8.45e-75 trxA - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Belongs to the thioredoxin family
PDDEGFHF_00737 3.02e-61 - - - L - - - MULE transposase domain
PDDEGFHF_00738 5.04e-129 - 2.1.1.72 - L ko:K07316 - ko00000,ko01000,ko02048 DNA methylase
PDDEGFHF_00740 0.0 guaA 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the synthesis of GMP from XMP
PDDEGFHF_00741 1.16e-146 - - - T - - - Region found in RelA / SpoT proteins
PDDEGFHF_00742 1.65e-101 dltr - - K - - - response regulator
PDDEGFHF_00743 5.92e-164 sptS - - T - - - Histidine kinase
PDDEGFHF_00744 1.61e-223 coaA 2.7.1.33 - F ko:K00867 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Pantothenic acid kinase
PDDEGFHF_00745 3.4e-136 - - - K - - - acetyltransferase
PDDEGFHF_00746 1.05e-174 - - - IQ - - - dehydrogenase reductase
PDDEGFHF_00747 0.0 ltaS 2.7.8.20 - M ko:K19005 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PDDEGFHF_00748 5.52e-204 - - - EG - - - EamA-like transporter family
PDDEGFHF_00749 0.0 helD 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
PDDEGFHF_00750 1.45e-152 - - - S ko:K03975 - ko00000 SNARE associated Golgi protein
PDDEGFHF_00751 7.81e-155 pgm3 - - G - - - phosphoglycerate mutase
PDDEGFHF_00752 2.06e-297 hflX - - S ko:K03665 - ko00000,ko03009 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PDDEGFHF_00753 1.78e-265 menC 4.2.1.113 - H ko:K02549 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB)
PDDEGFHF_00754 2.05e-172 pnuC - - H ko:K03811 - ko00000,ko02000 nicotinamide mononucleotide transporter
PDDEGFHF_00755 0.0 - - - E - - - amino acid
PDDEGFHF_00756 3.77e-113 - - - K - - - FR47-like protein
PDDEGFHF_00757 6.77e-314 yhgE - - V ko:K01421 - ko00000 domain protein
PDDEGFHF_00758 2.35e-119 - - - K - - - Transcriptional regulator (TetR family)
PDDEGFHF_00759 1.38e-251 galM 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the interconversion of alpha and beta anomers of maltose
PDDEGFHF_00760 5.54e-214 - - - - - - - -
PDDEGFHF_00761 2.5e-09 - 3.2.1.14 GH18 - ko:K01183 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 -
PDDEGFHF_00762 7.28e-110 zur - - P ko:K02076,ko:K03711 - ko00000,ko03000 Belongs to the Fur family
PDDEGFHF_00763 9.37e-137 gmk2 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Guanylate kinase
PDDEGFHF_00764 8.97e-95 - - - F - - - Nudix hydrolase
PDDEGFHF_00765 4.03e-261 yhdG - - E ko:K03294 - ko00000 Amino Acid
PDDEGFHF_00766 0.0 pepX 3.4.14.11 - E ko:K01281 - ko00000,ko01000,ko01002 Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PDDEGFHF_00767 1.38e-156 rplA - - J ko:K02863 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PDDEGFHF_00768 3.34e-68 rplK - - J ko:K02867 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PDDEGFHF_00769 1.18e-126 nusG - - K ko:K02601 - ko00000,ko03009,ko03021 Participates in transcription elongation, termination and antitermination
PDDEGFHF_00770 2.48e-32 secE - - U ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PDDEGFHF_00771 7.09e-30 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL33 family
PDDEGFHF_00772 5.57e-135 sigH - - K ko:K03088,ko:K03091,ko:K12296 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko03000,ko03021 Belongs to the sigma-70 factor family
PDDEGFHF_00773 1.01e-173 trmH 2.1.1.185 - J ko:K03218 - ko00000,ko01000,ko03009 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDDEGFHF_00774 1.25e-93 mrnC - - J ko:K11145 - ko00000,ko01000,ko03009 Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PDDEGFHF_00775 0.0 cysS 6.1.1.16 - J ko:K01883 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
PDDEGFHF_00776 9.63e-130 ywlG - - S - - - Belongs to the UPF0340 family
PDDEGFHF_00777 0.0 gltX 6.1.1.24 - J ko:K09698 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PDDEGFHF_00778 7.84e-264 yacL - - S - - - domain protein
PDDEGFHF_00779 0.0 radA - - O ko:K04485 - ko00000,ko03400 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PDDEGFHF_00780 3.55e-127 dut 3.6.1.23 - F ko:K01520 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 dUTP diphosphatase
PDDEGFHF_00781 6.52e-73 HA62_12640 - - S ko:K06975 - ko00000 GCN5-related N-acetyl-transferase
PDDEGFHF_00782 2.42e-149 - 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PDDEGFHF_00783 2.84e-143 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 transferase hexapeptide repeat
PDDEGFHF_00784 0.0 pepC 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
PDDEGFHF_00785 3.23e-215 - - - I - - - alpha/beta hydrolase fold
PDDEGFHF_00786 9.09e-164 gpmA1 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PDDEGFHF_00787 1.25e-212 - - - S ko:K07088 - ko00000 Sodium Bile acid symporter family
PDDEGFHF_00788 7.85e-242 lacM 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 beta-galactosidase
PDDEGFHF_00789 0.0 lacL 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PDDEGFHF_00791 1.35e-106 ydcK - - S ko:K03095 - ko00000 Belongs to the SprT family
PDDEGFHF_00792 0.0 tex - - K ko:K06959 - ko00000 Tex-like protein N-terminal domain protein
PDDEGFHF_00793 4.68e-196 nadE 6.3.1.5 - F ko:K01916 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PDDEGFHF_00794 0.0 pncB 6.3.4.21 - F ko:K00763 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PDDEGFHF_00795 8.7e-166 yvoA_2 - - K ko:K03710 - ko00000,ko03000 UbiC transcription regulator-associated domain protein
PDDEGFHF_00796 1.56e-170 racX 5.1.1.13 - M ko:K01779 ko00250,ko01054,map00250,map01054 ko00000,ko00001,ko01000 Belongs to the aspartate glutamate racemases family
PDDEGFHF_00797 4e-150 - - - - - - - -
PDDEGFHF_00800 9.6e-212 - - - S - - - Calcineurin-like phosphoesterase
PDDEGFHF_00801 0.0 dtpT - - U ko:K03305 - ko00000 amino acid peptide transporter
PDDEGFHF_00802 2.99e-242 - - - D - - - nuclear chromosome segregation
PDDEGFHF_00803 2.45e-42 - - - - - - - -
PDDEGFHF_00804 8.4e-56 - - - K - - - Helix-turn-helix domain
PDDEGFHF_00805 1.29e-312 - - - U - - - Belongs to the major facilitator superfamily
PDDEGFHF_00806 2.41e-232 ribF 2.7.1.26, 2.7.7.2 - H ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the ribF family
PDDEGFHF_00807 3.22e-214 truB 5.4.99.25 - J ko:K03177,ko:K03483 - ko00000,ko01000,ko03000,ko03016 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PDDEGFHF_00808 4.99e-76 rbfA - - J ko:K02834 - ko00000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PDDEGFHF_00809 0.0 infB - - J ko:K02519 - ko00000,ko03012,ko03029 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PDDEGFHF_00810 9.14e-66 ylxQ - - J - - - ribosomal protein
PDDEGFHF_00811 5.27e-64 ylxR - - K ko:K07742 - ko00000 Protein of unknown function (DUF448)
PDDEGFHF_00812 1.92e-282 nusA - - K ko:K02600 - ko00000,ko03009,ko03021 Participates in both transcription termination and antitermination
PDDEGFHF_00813 2.58e-108 rimP - - J ko:K09748 - ko00000,ko03009 Required for maturation of 30S ribosomal subunits
PDDEGFHF_00814 0.0 carB 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase
PDDEGFHF_00815 4.36e-264 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase glutamine chain
PDDEGFHF_00816 1.49e-252 argC 1.2.1.38 - E ko:K00145 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PDDEGFHF_00817 1.66e-262 argJ 2.3.1.1, 2.3.1.35 - E ko:K00620 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PDDEGFHF_00818 5.88e-176 argB 2.7.2.8 - F ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the acetylglutamate kinase family. ArgB subfamily
PDDEGFHF_00819 1.55e-273 argD 2.6.1.11, 2.6.1.17 - E ko:K00821 ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 acetylornithine
PDDEGFHF_00820 0.0 polC 2.7.7.7 - L ko:K03763 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PDDEGFHF_00821 0.0 proS 6.1.1.15 - J ko:K01881 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PDDEGFHF_00822 6.87e-295 rseP - - M ko:K11749 ko02024,ko04112,map02024,map04112 ko00000,ko00001,ko01000,ko01002 zinc metalloprotease
PDDEGFHF_00823 1.17e-173 cdsA 2.7.7.41 - I ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 ko00000,ko00001,ko00002,ko01000 Belongs to the CDS family
PDDEGFHF_00824 5.44e-185 uppS 2.5.1.31 - H ko:K00806 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PDDEGFHF_00825 6.51e-122 frr - - J ko:K02838 - ko00000,ko03012 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PDDEGFHF_00826 1.38e-166 pyrH 2.7.4.22 - F ko:K09903 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphorylation of UMP to UDP
PDDEGFHF_00827 4.14e-198 tsf - - J ko:K02357 - ko00000,ko03012,ko03029 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PDDEGFHF_00828 3.14e-181 rpsB - - J ko:K02967 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS2 family
PDDEGFHF_00829 2.67e-62 yazA - - L ko:K07461 - ko00000 GIY-YIG catalytic domain protein
PDDEGFHF_00830 3.97e-175 yabB 2.1.1.223 - L ko:K07461,ko:K15460 - ko00000,ko01000,ko03016 Methyltransferase small domain
PDDEGFHF_00831 3.06e-150 plsC 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Acyltransferase
PDDEGFHF_00832 1.05e-36 XK26_06720 - - S ko:K09976 - ko00000 Uncharacterised protein family (UPF0154)
PDDEGFHF_00833 1.97e-49 ynzC - - S - - - UPF0291 protein
PDDEGFHF_00834 4.36e-149 lexA 3.4.21.88 - K ko:K01356 - ko00000,ko00002,ko01000,ko01002,ko03400 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PDDEGFHF_00835 2.21e-276 mvaS 2.3.3.10 - I ko:K01641 ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Hydroxymethylglutaryl-CoA synthase
PDDEGFHF_00836 8.04e-124 pyrR 2.4.2.9 - F ko:K02825 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000,ko03000 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PDDEGFHF_00837 2.38e-168 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PDDEGFHF_00838 1.03e-147 pyrE 2.4.2.10 - F ko:K00762 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PDDEGFHF_00839 3.51e-21 gntT - - EG - - - gluconate transmembrane transporter activity
PDDEGFHF_00840 3.97e-62 - - - - - - - -
PDDEGFHF_00841 0.0 tagE6 2.4.1.52 GT4 M ko:K00712 - ko00000,ko01000,ko01003 Glycosyl transferases group 1
PDDEGFHF_00842 0.0 - 2.4.1.52 GT4 M ko:K00712 - ko00000,ko01000,ko01003 Poly(Glycerol-phosphate) alpha-glucosyltransferase
PDDEGFHF_00843 2.71e-197 metQ - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the nlpA lipoprotein family
PDDEGFHF_00844 1.65e-242 metN - - P ko:K02071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PDDEGFHF_00845 3.68e-142 metI - - P ko:K02072 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PDDEGFHF_00846 1.82e-274 - 3.5.1.18 - E ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 succinyl-diaminopimelate desuccinylase
PDDEGFHF_00847 2.79e-312 rumA_1 2.1.1.190, 2.1.1.35 - J ko:K00557,ko:K03215 - ko00000,ko01000,ko03009,ko03016 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PDDEGFHF_00848 1.62e-249 brnQ - - U ko:K03311 - ko00000 Component of the transport system for branched-chain amino acids
PDDEGFHF_00849 3.78e-155 iolS - - C ko:K06607 - ko00000,ko01000 Aldo keto reductase
PDDEGFHF_00850 6.53e-308 dltD - - M ko:K03740 ko01503,ko02020,ko05150,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01504 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PDDEGFHF_00851 3.78e-48 dltC 6.1.1.13 - J ko:K14188 ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01000,ko01504 Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PDDEGFHF_00852 2.74e-307 dltB - - M ko:K03739 ko01503,ko02020,ko05150,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01504 MBOAT, membrane-bound O-acyltransferase family
PDDEGFHF_00853 0.0 dltA 6.1.1.13 - H ko:K03367 ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01000,ko01504 Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PDDEGFHF_00854 9.8e-09 dltX - - S - - - D-Ala-teichoic acid biosynthesis protein
PDDEGFHF_00855 3.68e-278 sbcD - - L ko:K03547 - ko00000,ko03400 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PDDEGFHF_00856 0.0 sbcC - - L ko:K03546 - ko00000,ko03400 Putative exonuclease SbcCD, C subunit
PDDEGFHF_00857 3.66e-315 serS 6.1.1.11 - J ko:K01875 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PDDEGFHF_00859 4.91e-240 trpS 6.1.1.2 - J ko:K01867 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
PDDEGFHF_00861 5.66e-288 glnP - - P ko:K02029,ko:K02030,ko:K10036 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
PDDEGFHF_00862 1.05e-173 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PDDEGFHF_00863 0.0 aapA - - E ko:K03293,ko:K11737 - ko00000,ko02000 Amino acid permease
PDDEGFHF_00866 0.0 pepDA - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
PDDEGFHF_00867 3.89e-209 endA - - F ko:K15051 - ko00000 DNA RNA non-specific endonuclease
PDDEGFHF_00868 4.23e-213 - 1.1.1.157 - I ko:K00074 ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120 ko00000,ko00001,ko01000 3-hydroxyacyl-CoA dehydrogenase
PDDEGFHF_00869 0.0 - - - I - - - Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PDDEGFHF_00870 5.3e-207 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
PDDEGFHF_00872 1.95e-291 - - - - - - - -
PDDEGFHF_00873 1.67e-249 flp - - V - - - Beta-lactamase
PDDEGFHF_00874 2.02e-117 pgpA - - I - - - Phosphatidylglycerophosphatase A
PDDEGFHF_00875 3.45e-158 - - - S ko:K07090 - ko00000 membrane transporter protein
PDDEGFHF_00876 3.66e-236 XK27_12525 - - S - - - AI-2E family transporter
PDDEGFHF_00877 2.2e-272 atoB 1.1.1.88, 2.3.1.9 - I ko:K00054,ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the thiolase family
PDDEGFHF_00878 3.46e-207 rssA - - S - - - Phospholipase, patatin family
PDDEGFHF_00879 1.65e-215 - - - K - - - LysR substrate binding domain
PDDEGFHF_00880 0.0 - 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
PDDEGFHF_00881 7.21e-108 - - - S - - - Domain of unknown function (DUF4352)
PDDEGFHF_00882 8.21e-144 yicL - - EG - - - EamA-like transporter family
PDDEGFHF_00883 4.58e-85 - - - - - - - -
PDDEGFHF_00886 1.72e-40 - - - - - - - -
PDDEGFHF_00887 3.96e-89 - - - S - - - pyridoxamine 5-phosphate
PDDEGFHF_00888 5.37e-230 - - - K - - - WYL domain
PDDEGFHF_00889 2.69e-311 XK27_08635 - - S ko:K09157 - ko00000 UPF0210 protein
PDDEGFHF_00890 1.65e-53 XK27_08630 - - T ko:K07166 - ko00000 Belongs to the UPF0237 family
PDDEGFHF_00891 9.99e-216 mccA 2.5.1.134, 2.5.1.47 - E ko:K01738,ko:K17216 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the cysteine synthase cystathionine beta- synthase family
PDDEGFHF_00892 4.58e-269 mccB 4.4.1.1, 4.4.1.2, 4.4.1.8 - E ko:K01760,ko:K17217 ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 cystathionine
PDDEGFHF_00893 2.07e-262 adh 1.1.1.1 - C ko:K00001,ko:K18369 ko00010,ko00071,ko00350,ko00625,ko00626,ko00640,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00640,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 Zinc-binding dehydrogenase
PDDEGFHF_00894 2.14e-278 - - - G - - - Transporter, major facilitator family protein
PDDEGFHF_00895 0.0 menE 6.2.1.26 - H ko:K01911 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
PDDEGFHF_00896 1.2e-201 menB 4.1.3.36 - H ko:K01661 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PDDEGFHF_00897 1.34e-74 yuxO - - Q - - - Thioesterase superfamily
PDDEGFHF_00898 0.0 - 1.8.1.7 - C ko:K00383,ko:K21739 ko00480,ko04918,map00480,map04918 ko00000,ko00001,ko01000 Pyridine nucleotide-disulfide oxidoreductase
PDDEGFHF_00899 2.82e-65 - - - L - - - Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PDDEGFHF_00900 4.32e-17 lacA 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 -beta-galactosidase
PDDEGFHF_00901 1.8e-271 nupG - - F ko:K03317,ko:K11535,ko:K16323 - ko00000,ko02000 Nucleoside transporter
PDDEGFHF_00902 2.31e-185 rihA 3.2.2.1 - F ko:K01239,ko:K01250,ko:K12700 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 Nucleoside
PDDEGFHF_00903 4.29e-172 rsmG 2.1.1.170 - J ko:K03501 - ko00000,ko01000,ko03009,ko03036 Specifically methylates the N7 position of a guanine in 16S rRNA
PDDEGFHF_00904 1.91e-208 noc - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
PDDEGFHF_00905 3.06e-188 spo0J - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
PDDEGFHF_00906 1.47e-41 yyzM - - S - - - Bacterial protein of unknown function (DUF951)
PDDEGFHF_00907 6.1e-255 ychF - - J ko:K06942 - ko00000,ko03009 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PDDEGFHF_00908 2.77e-174 - - - S - - - Protein of unknown function (DUF1129)
PDDEGFHF_00909 3.45e-264 guaB 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PDDEGFHF_00910 1.21e-222 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
PDDEGFHF_00911 4.56e-168 epsB - - M - - - biosynthesis protein
PDDEGFHF_00912 1.33e-151 ywqD - - D - - - Capsular exopolysaccharide family
PDDEGFHF_00913 8.34e-180 ywqE 3.1.3.48 - GM ko:K01104 - ko00000,ko01000 PHP domain protein
PDDEGFHF_00914 1.42e-105 capM - - M ko:K13012 - ko00000,ko01005 Bacterial sugar transferase
PDDEGFHF_00915 6.62e-73 licD - - M ko:K07271 - ko00000,ko01000 LICD family
PDDEGFHF_00916 1.87e-54 - - GT2 S ko:K12997 - ko00000,ko01000,ko01003,ko01005 Glycosyl transferase family 2
PDDEGFHF_00917 1.01e-83 tarI - - M - - - Catalyzes the transfer of the cytidylyl group of CTP to D-ribitol 5-phosphate
PDDEGFHF_00918 3.15e-62 - 4.2.1.46 - GM ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 ko00000,ko00001,ko00002,ko01000 Male sterility protein
PDDEGFHF_00920 1.58e-19 - - GT2 V ko:K12990 ko02024,ko02025,map02024,map02025 ko00000,ko00001,ko01000,ko01003,ko01005 Glycosyl transferase, family 2
PDDEGFHF_00921 1.64e-48 - - - M - - - Glycosyltransferase like family 2
PDDEGFHF_00922 2e-133 cps1C - - S ko:K03328 - ko00000 Membrane protein involved in the export of O-antigen and teichoic acid
PDDEGFHF_00923 1.16e-207 rfbA 2.7.7.24 - H ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PDDEGFHF_00924 1.67e-141 rfbC 5.1.3.13 - M ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PDDEGFHF_00925 2.4e-259 rfbB 4.2.1.46 - M ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PDDEGFHF_00926 1.3e-202 rfbD 1.1.1.133 - M ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PDDEGFHF_00929 1.93e-121 - - - S ko:K09705 - ko00000 Cupin superfamily (DUF985)
PDDEGFHF_00930 1.06e-158 vanR - - K - - - response regulator
PDDEGFHF_00931 8.86e-267 hpk31 - - T - - - Histidine kinase
PDDEGFHF_00932 2.78e-268 dacA 3.4.16.4 - M ko:K01286,ko:K07258 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01002,ko01011 Belongs to the peptidase S11 family
PDDEGFHF_00933 5.39e-191 - - - E - - - AzlC protein
PDDEGFHF_00934 2.22e-78 - - - S - - - branched-chain amino acid
PDDEGFHF_00936 1.57e-98 - - - K ko:K07467 - ko00000 Replication initiation factor
PDDEGFHF_00937 1.02e-30 - - - - - - - -
PDDEGFHF_00938 5.17e-125 - - - L - - - DNA integration
PDDEGFHF_00939 1.03e-206 rbgA - - S ko:K14540 - ko00000,ko03009 Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PDDEGFHF_00940 4.82e-179 rnhB 3.1.26.4 - L ko:K03470 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDDEGFHF_00941 5.14e-212 dprA - - LU ko:K04096 - ko00000 DNA protecting protein DprA
PDDEGFHF_00942 0.0 topA 5.99.1.2 - L ko:K03168 - ko00000,ko01000,ko03032,ko03400 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PDDEGFHF_00943 2.24e-198 - - - D - - - DNA integration
PDDEGFHF_00944 9.3e-220 lacX 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Aldose 1-epimerase
PDDEGFHF_00945 5.26e-134 plsY 2.3.1.15 - I ko:K08591 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PDDEGFHF_00946 0.0 parE - - L ko:K02622 - ko00000,ko01000,ko02048,ko03032,ko03036 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PDDEGFHF_00947 0.0 parC - - L ko:K02621 - ko00000,ko01000,ko02048,ko03032,ko03036 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PDDEGFHF_00948 2.53e-123 - - - S ko:K08996 - ko00000 Protein of unknown function (DUF1440)
PDDEGFHF_00949 4.6e-220 ppaC 3.6.1.1 - C ko:K15986 ko00190,map00190 ko00000,ko00001,ko01000 inorganic pyrophosphatase
PDDEGFHF_00950 7.86e-92 - - - S - - - Belongs to the HesB IscA family
PDDEGFHF_00951 4.65e-100 msrB 1.8.4.12 - O ko:K07305 - ko00000,ko01000 peptide methionine sulfoxide reductase
PDDEGFHF_00952 3.6e-122 ywnH 2.3.1.183 - M ko:K03823 ko00440,ko01130,map00440,map01130 ko00000,ko00001,ko01000 Acetyltransferase (GNAT) domain
PDDEGFHF_00953 1.64e-105 ytsP 1.8.4.14 - T ko:K08968 ko00270,map00270 ko00000,ko00001,ko01000 GAF domain-containing protein
PDDEGFHF_00954 1.39e-311 - - - U - - - Belongs to the purine-cytosine permease (2.A.39) family
PDDEGFHF_00955 2.17e-306 codA 3.5.4.1 - F ko:K01485 ko00240,ko00330,ko01100,map00240,map00330,map01100 ko00000,ko00001,ko01000 cytosine deaminase
PDDEGFHF_00956 0.0 - - - EP - - - Psort location Cytoplasmic, score
PDDEGFHF_00958 0.0 rarA - - L ko:K07478 - ko00000 recombination factor protein RarA
PDDEGFHF_00959 2.68e-152 - - - S ko:K07150 - ko00000 Protein of unknown function (DUF554)
PDDEGFHF_00960 4.3e-312 yhjX - - P ko:K08177 - ko00000,ko02000 Major Facilitator Superfamily
PDDEGFHF_00962 3.57e-22 ycnB - - U - - - Belongs to the major facilitator superfamily
PDDEGFHF_00963 1.46e-64 eriC - - P ko:K03281 - ko00000 chloride
PDDEGFHF_00964 8.82e-11 eriC - - P ko:K03281 - ko00000 chloride
PDDEGFHF_00965 9.08e-197 - - - C - - - NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain
PDDEGFHF_00966 2.78e-151 - - - M - - - racemase activity, acting on amino acids and derivatives
PDDEGFHF_00968 0.0 pacL - - P - - - Cation transporter/ATPase, N-terminus
PDDEGFHF_00970 1.87e-156 - - - - - - - -
PDDEGFHF_00972 2.77e-134 - - - S - - - Domain of unknown function (DUF4767)
PDDEGFHF_00973 6.7e-72 - - - K - - - Helix-turn-helix domain
PDDEGFHF_00974 2.56e-220 - 1.3.1.9 - S ko:K02371 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Nitronate monooxygenase
PDDEGFHF_00975 1.1e-07 - 3.5.3.1 - E ko:K01476 ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146 ko00000,ko00001,ko00002,ko01000 Arginase family
PDDEGFHF_00976 1.13e-98 - 3.5.3.1 - E ko:K01476 ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146 ko00000,ko00001,ko00002,ko01000 Arginase family
PDDEGFHF_00977 5.1e-66 ybjQ - - S - - - Belongs to the UPF0145 family
PDDEGFHF_00978 5.76e-88 - 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PDDEGFHF_00979 3.38e-158 - - - K - - - Bacterial regulatory proteins, tetR family
PDDEGFHF_00980 0.0 yhcA - - V ko:K02003,ko:K02004 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PDDEGFHF_00981 6.85e-72 - - - S - - - FMN_bind
PDDEGFHF_00982 5.16e-83 - 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PDDEGFHF_00983 1.24e-165 - - - P - - - nitric oxide dioxygenase activity
PDDEGFHF_00984 8.92e-63 - - - S - - - Aminoacyl-tRNA editing domain
PDDEGFHF_00985 1.14e-94 - - - M ko:K02004 - ko00000,ko00002,ko02000 Membrane
PDDEGFHF_00986 1.1e-73 - - - M ko:K02004 - ko00000,ko00002,ko02000 Membrane
PDDEGFHF_00987 5.02e-31 XK27_06785 - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
PDDEGFHF_00988 2.66e-132 - - - K - - - Transcriptional regulator
PDDEGFHF_00989 0.0 - - - M - - - 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PDDEGFHF_00990 1.46e-216 - - - L ko:K07496 - ko00000 transposase, IS605 OrfB family
PDDEGFHF_00991 3.41e-84 - - - L ko:K07491 - ko00000 Transposase IS200 like
PDDEGFHF_00992 1.52e-89 - - - I - - - Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PDDEGFHF_00993 2.37e-211 - - - I - - - Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PDDEGFHF_00994 2.45e-296 argG 6.3.4.5 - E ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the argininosuccinate synthase family. Type 1 subfamily
PDDEGFHF_00995 0.0 argH 4.3.2.1 - E ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 argininosuccinate lyase
PDDEGFHF_00996 1.58e-67 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 transferase hexapeptide repeat
PDDEGFHF_00997 2.52e-200 yneP - - L ko:K07107 - ko00000,ko01000 Thioesterase-like superfamily
PDDEGFHF_00998 3.59e-10 - - - S - - - NADPH-dependent FMN reductase
PDDEGFHF_00999 1.86e-39 - - - S - - - NADPH-dependent FMN reductase
PDDEGFHF_01000 4.06e-21 - - - S - - - NADPH-dependent FMN reductase
PDDEGFHF_01001 0.0 ctrA - - E ko:K03294 - ko00000 amino acid
PDDEGFHF_01002 0.0 gabT 2.6.1.19, 5.1.1.21 - E ko:K00823,ko:K20708 ko00250,ko00410,ko00640,ko00650,ko01100,ko01120,map00250,map00410,map00640,map00650,map01100,map01120 ko00000,ko00001,ko00002,ko01000,ko01007 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PDDEGFHF_01004 1.43e-21 - - - S ko:K07088 - ko00000 Membrane transport protein
PDDEGFHF_01005 0.0 npr 1.11.1.1 - C ko:K05910 - ko00000,ko01000 NADH oxidase
PDDEGFHF_01006 9.21e-19 - - - D - - - Antitoxin component of a toxin-antitoxin (TA) module
PDDEGFHF_01007 4.3e-30 - - - D ko:K19158 - ko00000,ko01000,ko02048 mRNA cleavage
PDDEGFHF_01008 2.59e-235 - - - S ko:K07035 - ko00000 Phosphotransferase system, EIIC
PDDEGFHF_01010 4.35e-247 nhaC - - C ko:K03315 - ko00000,ko02000 Na H antiporter NhaC
PDDEGFHF_01012 2.29e-96 - 3.5.3.18 - E ko:K01482 - ko00000,ko01000,ko04147 Amidinotransferase
PDDEGFHF_01013 4.53e-115 - - - S ko:K19055 - ko00000,ko01000,ko03016 Aminoacyl-tRNA editing domain
PDDEGFHF_01014 0.0 sufI - - Q - - - Multicopper oxidase
PDDEGFHF_01015 1.28e-67 - - - K - - - 2 iron, 2 sulfur cluster binding
PDDEGFHF_01016 1.03e-120 - 1.5.1.40 - S ko:K06988 - ko00000,ko01000 NADP oxidoreductase coenzyme F420-dependent
PDDEGFHF_01017 1.22e-154 - - - Q - - - Methyltransferase domain
PDDEGFHF_01019 1.16e-134 - - - S - - - CAAX protease self-immunity
PDDEGFHF_01020 3.59e-128 ogt 2.1.1.63 - L ko:K00567 - ko00000,ko01000,ko03400 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PDDEGFHF_01021 1.71e-59 - - - EGP - - - Major Facilitator Superfamily
PDDEGFHF_01022 1.3e-79 - - - EGP - - - Major Facilitator Superfamily
PDDEGFHF_01023 2.39e-131 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
PDDEGFHF_01024 1.96e-276 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
PDDEGFHF_01025 2.2e-136 - - - - - - - -
PDDEGFHF_01026 1.76e-113 dps - - P ko:K04047 - ko00000,ko03036 Belongs to the Dps family
PDDEGFHF_01027 0.0 ykpA - - S - - - ABC transporter, ATP-binding protein
PDDEGFHF_01028 2.89e-44 yneR - - S - - - Belongs to the HesB IscA family
PDDEGFHF_01029 2.58e-180 - - - S - - - NADPH-dependent FMN reductase
PDDEGFHF_01030 0.0 gshA 6.3.2.2 - H ko:K01919 ko00270,ko00480,ko01100,map00270,map00480,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the glutamate--cysteine ligase type 1 family
PDDEGFHF_01031 3.04e-204 - 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily
PDDEGFHF_01032 8.94e-135 - 3.2.2.10 - S ko:K06966 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the LOG family
PDDEGFHF_01033 5.17e-83 - - - S - - - Domain of unknown function (DUF4828)
PDDEGFHF_01034 4.94e-244 mocA - - S - - - Oxidoreductase
PDDEGFHF_01035 1.42e-305 yfmL - - L - - - DEAD DEAH box helicase
PDDEGFHF_01037 1.38e-98 gtcA - - S - - - Teichoic acid glycosylation protein
PDDEGFHF_01038 4.75e-101 ykuP - - C ko:K03839 - ko00000 Flavodoxin
PDDEGFHF_01039 1.17e-214 map 3.4.11.18 - E ko:K01265 - ko00000,ko01000,ko01002 Methionine Aminopeptidase
PDDEGFHF_01040 9.09e-91 XK27_08315 - - M - - - Sulfatase
PDDEGFHF_01041 3.61e-44 pucG 2.6.1.112, 2.6.1.44, 2.6.1.45, 2.6.1.51 - E ko:K00830,ko:K00839 ko00230,ko00250,ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko04146,map00230,map00250,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map04146 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase class-V
PDDEGFHF_01042 6.46e-105 pucG 2.6.1.112, 2.6.1.44, 2.6.1.45, 2.6.1.51 - E ko:K00830,ko:K00839 ko00230,ko00250,ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko04146,map00230,map00250,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map04146 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase class-V
PDDEGFHF_01043 2.43e-77 - - - QT ko:K09684 - ko00000,ko03000 Purine catabolism regulatory protein-like family
PDDEGFHF_01044 1.13e-167 - 3.5.2.3, 3.5.2.5 - F ko:K01465,ko:K01466 ko00230,ko00240,ko01100,ko01120,map00230,map00240,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PDDEGFHF_01045 3.3e-122 allC 3.5.3.9 - E ko:K02083 ko00230,ko01120,map00230,map01120 ko00000,ko00001,ko01000,ko01002 Peptidase family M20/M25/M40
PDDEGFHF_01046 2.31e-258 allD 1.1.1.350 - C ko:K00073 ko00230,ko01120,map00230,map01120 ko00000,ko00001,ko01000 Belongs to the LDH2 MDH2 oxidoreductase family
PDDEGFHF_01047 5.26e-23 fdrA - - C ko:K02381 - ko00000 CoA-ligase
PDDEGFHF_01048 1.5e-226 rihA - - F ko:K01250 - ko00000,ko01000 Inosine-uridine preferring nucleoside hydrolase
PDDEGFHF_01049 3.88e-160 - - - C - - - nitroreductase
PDDEGFHF_01050 1.98e-176 - - - E - - - GDSL-like Lipase/Acylhydrolase family
PDDEGFHF_01051 1.06e-70 - - - S - - - Mazg nucleotide pyrophosphohydrolase
PDDEGFHF_01052 5.41e-253 adh1 1.1.1.1 - E ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 alcohol dehydrogenase
PDDEGFHF_01053 0.0 pepN 3.4.11.2 - E ko:K01256 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 aminopeptidase
PDDEGFHF_01054 7.58e-82 - - - C - - - Aldo keto reductase
PDDEGFHF_01055 1.93e-213 - - - K - - - Transcriptional regulator
PDDEGFHF_01057 3.03e-181 nfrA 1.5.1.38 - C ko:K19285 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 nitroreductase
PDDEGFHF_01059 6.97e-189 metQ1 - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the nlpA lipoprotein family
PDDEGFHF_01060 1.28e-258 napA - - P - - - Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PDDEGFHF_01061 0.0 - - - L - - - DNA helicase
PDDEGFHF_01062 7.95e-222 ppx 3.6.1.11, 3.6.1.40 - FP ko:K01524 ko00230,map00230 ko00000,ko00001,ko01000 exopolyphosphatase
PDDEGFHF_01063 3.35e-287 mvaA 1.1.1.88, 2.3.1.9 - C ko:K00054,ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the HMG-CoA reductase family
PDDEGFHF_01064 5.3e-239 - - - - - - - -
PDDEGFHF_01065 2.31e-165 cobB - - K ko:K12410 - ko00000,ko01000 SIR2 family
PDDEGFHF_01066 2.38e-272 blt - - EGP ko:K08153 - ko00000,ko00002,ko02000 transporter
PDDEGFHF_01067 9.96e-209 yunF - - F - - - Protein of unknown function DUF72
PDDEGFHF_01068 0.0 metG 6.1.1.10 - J ko:K01874 ko00450,ko00970,map00450,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PDDEGFHF_01069 1.34e-188 tatD - - L ko:K03424 - ko00000,ko01000 hydrolase, TatD family
PDDEGFHF_01070 7.92e-129 rnmV 3.1.26.8 - J ko:K05985 - ko00000,ko01000 Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PDDEGFHF_01071 3.57e-205 ksgA 2.1.1.182 - J ko:K02528 - ko00000,ko01000,ko03009 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PDDEGFHF_01072 4.04e-205 ispE 2.7.1.148 - F ko:K00919,ko:K16924 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko02000 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PDDEGFHF_01073 3.47e-213 psaA - - P ko:K02077,ko:K11707 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the bacterial solute-binding protein 9 family
PDDEGFHF_01074 1.98e-123 adcC - - P ko:K02074,ko:K09817,ko:K11710 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
PDDEGFHF_01075 4.65e-165 - - - U ko:K02075 - ko00000,ko00002,ko02000 ABC 3 transport family
PDDEGFHF_01076 1.44e-191 purR - - F ko:K09685 - ko00000,ko03000 pur operon repressor
PDDEGFHF_01077 9.91e-302 glmU 2.3.1.157, 2.7.7.23 - M ko:K04042 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PDDEGFHF_01078 7.69e-228 prs 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PDDEGFHF_01079 1.89e-78 - - - - - - - -
PDDEGFHF_01080 1.43e-184 yidA - - S - - - hydrolase
PDDEGFHF_01081 0.0 ywfO - - S ko:K06885 - ko00000 HD domain protein
PDDEGFHF_01082 5.23e-97 ywiB - - S - - - Domain of unknown function (DUF1934)
PDDEGFHF_01083 2.16e-97 rpoE - - K ko:K03048 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko03021,ko03400 Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PDDEGFHF_01084 0.0 pyrG 6.3.4.2 - F ko:K01937 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PDDEGFHF_01085 2.52e-301 murA 2.5.1.7 - M ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PDDEGFHF_01086 3.85e-55 rpmE2 - - J ko:K02909 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L31
PDDEGFHF_01088 1.32e-158 srtA 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 sortase family
PDDEGFHF_01089 3.01e-60 ptpA 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PDDEGFHF_01090 1.66e-119 lemA - - S ko:K03744 - ko00000 LemA family
PDDEGFHF_01091 1.34e-202 htpX - - O ko:K03799 - ko00000,ko00002,ko01000,ko01002 Belongs to the peptidase M48B family
PDDEGFHF_01092 0.0 murF 6.3.2.10 - M ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PDDEGFHF_01093 0.0 cshA 3.6.4.13 - F ko:K05592 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PDDEGFHF_01094 1.18e-78 acpS 2.7.8.7 - I ko:K00997 ko00770,map00770 ko00000,ko00001,ko01000 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PDDEGFHF_01095 6.25e-268 alr 5.1.1.1, 5.1.1.5 - E ko:K01775,ko:K20707 ko00473,ko01100,ko01502,map00473,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PDDEGFHF_01096 7.09e-75 ndoA - - L ko:K07171 - ko00000,ko01000,ko02048 Toxic component of a toxin-antitoxin (TA) module
PDDEGFHF_01097 4.51e-148 - - - S - - - (CBS) domain
PDDEGFHF_01098 7.98e-132 pth 3.1.1.29 - J ko:K01056 - ko00000,ko01000,ko03012 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PDDEGFHF_01099 0.0 mfd - - L ko:K03723 ko03420,map03420 ko00000,ko00001,ko01000,ko03400 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PDDEGFHF_01100 2.47e-53 yabO - - J - - - S4 domain protein
PDDEGFHF_01101 5.88e-74 divIC - - D ko:K13052 - ko00000,ko03036 Septum formation initiator
PDDEGFHF_01102 1.65e-113 yabR - - J ko:K07571 - ko00000 RNA binding
PDDEGFHF_01103 0.0 tilS 2.4.2.8, 6.3.4.19 - J ko:K04075,ko:K15780 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000,ko03016 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PDDEGFHF_01104 5.21e-126 hpt 2.4.2.8 - F ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the purine pyrimidine phosphoribosyltransferase family
PDDEGFHF_01105 0.0 ftsH - - O ko:K03798 - ko00000,ko00002,ko01000,ko01002,ko03110 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PDDEGFHF_01106 4.73e-209 hslO - - O ko:K04083 - ko00000,ko03110 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PDDEGFHF_01107 5.32e-242 dus - - J ko:K05540 - ko00000,ko01000,ko03016 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PDDEGFHF_01108 0.0 lysS 6.1.1.6 - J ko:K04567 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family
PDDEGFHF_01110 1.12e-213 pyrD 1.3.1.14, 1.3.98.1 - F ko:K00226,ko:K17828 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PDDEGFHF_01111 0.0 carB 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase
PDDEGFHF_01112 7.25e-265 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase glutamine chain
PDDEGFHF_01113 8.96e-310 pyrC 3.5.2.3 - F ko:K01465 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PDDEGFHF_01114 1.33e-229 pyrB 2.1.3.2 - F ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
PDDEGFHF_01115 6.11e-143 ycsI - - S - - - Protein of unknown function (DUF1445)
PDDEGFHF_01117 1.51e-152 - - - L - - - PFAM transposase, IS4 family protein
PDDEGFHF_01118 3.56e-177 - - - L - - - PFAM Integrase catalytic region
PDDEGFHF_01120 3.97e-10 - - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL33 family
PDDEGFHF_01121 2.58e-24 rpmF - - J ko:K02911 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bL32 family
PDDEGFHF_01123 4.52e-07 - - - - - - - -
PDDEGFHF_01126 7.07e-244 yclC 4.1.1.61, 4.1.1.98 - H ko:K01612,ko:K03182,ko:K16874 ko00130,ko00365,ko00627,ko01100,ko01110,ko01120,ko01220,map00130,map00365,map00627,map01100,map01110,map01120,map01220 ko00000,ko00001,ko00002,ko01000 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
PDDEGFHF_01127 9.65e-47 yclC 4.1.1.61, 4.1.1.98 - H ko:K01612,ko:K03182,ko:K16874 ko00130,ko00365,ko00627,ko01100,ko01110,ko01120,ko01220,map00130,map00365,map00627,map01100,map01110,map01120,map01220 ko00000,ko00001,ko00002,ko01000 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
PDDEGFHF_01128 1.08e-92 ubiX 2.5.1.129 - H ko:K03186 ko00130,ko00627,ko00940,ko01100,ko01110,ko01120,ko01220,map00130,map00627,map00940,map01100,map01110,map01120,map01220 ko00000,ko00001,ko00002,ko01000 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
PDDEGFHF_01129 2.72e-238 - - - P - - - Sodium:sulfate symporter transmembrane region
PDDEGFHF_01130 6.37e-92 - - - K - - - LysR substrate binding domain
PDDEGFHF_01131 3.52e-50 - - - - - - - -
PDDEGFHF_01135 8.43e-100 cas2 - - L ko:K09951 - ko00000,ko02048 CRISPR-associated protein (Cas_Cas2CT1978)
PDDEGFHF_01136 8.83e-160 cas1 - - L ko:K15342 - ko00000,ko02048,ko03400 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PDDEGFHF_01137 2.37e-90 casE - - S ko:K19126 - ko00000,ko02048 CRISPR_assoc
PDDEGFHF_01138 9.98e-83 casD - - S ko:K19125 - ko00000,ko02048 CRISPR-associated protein (Cas_Cas5)
PDDEGFHF_01139 2.35e-165 casC - - L ko:K19124 - ko00000,ko02048 CT1975-like protein
PDDEGFHF_01140 6.17e-29 - - - S ko:K19046 - ko00000,ko02048 CRISPR-associated protein Cse2 (CRISPR_cse2)
PDDEGFHF_01141 5.47e-177 casA - - L ko:K19123 - ko00000,ko02048 the current gene model (or a revised gene model) may contain a frame shift
PDDEGFHF_01142 4.75e-48 cas3 - - L ko:K07012 - ko00000,ko01000,ko02048 CRISPR-associated helicase cas3
PDDEGFHF_01143 6.87e-117 yejD 2.4.2.6 - F ko:K08728 ko00240,map00240 ko00000,ko00001,ko01000 nucleoside 2-deoxyribosyltransferase
PDDEGFHF_01144 1.14e-37 - - - EGP - - - Major Facilitator
PDDEGFHF_01145 0.0 copA 3.6.3.3, 3.6.3.5, 3.6.3.54 - P ko:K01534,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 P-type ATPase
PDDEGFHF_01146 2.79e-69 - - - S - - - Cupredoxin-like domain
PDDEGFHF_01147 1.07e-67 - - - S - - - Cupredoxin-like domain
PDDEGFHF_01148 7.08e-227 - - - - - - - -
PDDEGFHF_01149 1.35e-283 araT 2.6.1.57 - E ko:K00832,ko:K00841 ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
PDDEGFHF_01150 1.15e-169 gpmA 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PDDEGFHF_01151 1.36e-307 purD 6.3.4.13 - F ko:K01945 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the GARS family
PDDEGFHF_01152 0.0 purH 2.1.2.3, 3.5.4.10 - F ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 ko00000,ko00001,ko00002,ko01000,ko04147 Bifunctional purine biosynthesis protein PurH
PDDEGFHF_01153 1.13e-139 purN 2.1.2.2 - F ko:K11175 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PDDEGFHF_01154 4.8e-251 purM 6.3.3.1 - F ko:K01933 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoribosylformylglycinamidine cyclo-ligase
PDDEGFHF_01155 0.0 purF 2.4.2.14 - F ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PDDEGFHF_01156 0.0 purL 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PDDEGFHF_01157 4.87e-164 purQ 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PDDEGFHF_01158 1.36e-50 purS 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PDDEGFHF_01159 6.13e-174 purC 6.3.2.6 - F ko:K01923 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the SAICAR synthetase family
PDDEGFHF_01160 0.0 tcaA - - S ko:K21463 - ko00000 response to antibiotic
PDDEGFHF_01161 1.45e-223 hrpQ 4.6.1.1 - T ko:K01768,ko:K03220,ko:K10914 ko00230,ko02020,ko02024,ko02025,ko02026,ko04113,ko04213,ko05111,map00230,map02020,map02024,map02025,map02026,map04113,map04213,map05111 ko00000,ko00001,ko00002,ko01000,ko02044,ko03000 histone H2A K63-linked ubiquitination
PDDEGFHF_01162 0.0 purB 4.3.2.2 - F ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PDDEGFHF_01163 3.25e-273 purK 6.3.4.18 - F ko:K01589 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PDDEGFHF_01164 8.26e-106 purE 5.4.99.18 - F ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PDDEGFHF_01165 0.0 fhs 6.3.4.3 - F ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the formate--tetrahydrofolate ligase family
PDDEGFHF_01166 1.16e-222 ydbI - - K - - - AI-2E family transporter
PDDEGFHF_01167 2.92e-05 - - - K - - - Transcriptional regulator C-terminal region
PDDEGFHF_01168 1.24e-292 cfa 2.1.1.79 - M ko:K00574 - ko00000,ko01000 cyclopropane-fatty-acyl-phospholipid synthase
PDDEGFHF_01170 0.0 nylA 3.5.1.4 - J ko:K01426 ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120 ko00000,ko00001,ko01000 Belongs to the amidase family
PDDEGFHF_01171 3.68e-35 arcD - - S - - - C4-dicarboxylate anaerobic carrier
PDDEGFHF_01172 1.87e-113 arcD - - S - - - C4-dicarboxylate anaerobic carrier
PDDEGFHF_01173 9.03e-279 ypsC - - L ko:K07444 - ko00000,ko01000 Belongs to the methyltransferase superfamily
PDDEGFHF_01174 9.95e-108 - - - F - - - Hydrolase, NUDIX family
PDDEGFHF_01175 1.07e-271 - - - S ko:K06915 - ko00000 AAA-like domain
PDDEGFHF_01176 0.0 fusA1 - - J - - - elongation factor G
PDDEGFHF_01177 2.08e-75 gpsB - - D - - - Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PDDEGFHF_01178 7.3e-143 ypsA - - S - - - Belongs to the UPF0398 family
PDDEGFHF_01179 5.72e-151 recU - - L ko:K03700 - ko00000,ko03400 Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PDDEGFHF_01180 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M ko:K05366 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 penicillin-binding protein 1A
PDDEGFHF_01181 6.64e-205 - - - EG - - - EamA-like transporter family
PDDEGFHF_01182 1.65e-243 tas3 - - C ko:K19265 - ko00000,ko01000 Aldo keto reductase family protein
PDDEGFHF_01183 5.43e-190 ypuA - - S - - - Protein of unknown function (DUF1002)
PDDEGFHF_01184 8.36e-173 dnaD - - L ko:K02086 - ko00000 DnaD domain protein
PDDEGFHF_01185 0.0 asnS 6.1.1.22 - J ko:K01893 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Asparaginyl-tRNA synthetase
PDDEGFHF_01186 6.66e-115 ypmB - - S - - - Protein conserved in bacteria
PDDEGFHF_01187 0.0 dinG 3.6.4.12 - L ko:K03722 - ko00000,ko01000,ko03400 helicase involved in DNA repair and perhaps also replication
PDDEGFHF_01188 5.33e-215 mvk 2.7.1.36 - I ko:K00869 ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146 ko00000,ko00001,ko00002,ko01000 mevalonate kinase
PDDEGFHF_01189 7.43e-231 mvaD 4.1.1.33 - I ko:K01597 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 diphosphomevalonate decarboxylase
PDDEGFHF_01190 1e-271 mvaK2 2.7.4.2 - I ko:K00938 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 phosphomevalonate kinase
PDDEGFHF_01191 5.29e-263 fni 5.3.3.2 - C ko:K01823 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PDDEGFHF_01192 2.25e-118 - - - L - - - Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PDDEGFHF_01193 6.7e-81 - - - - - - - -
PDDEGFHF_01194 1.16e-242 hrcA - - K ko:K03705 - ko00000,ko03000 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PDDEGFHF_01195 2.79e-86 grpE - - O ko:K03687 - ko00000,ko03029,ko03110 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PDDEGFHF_01196 0.0 dnaK - - O ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Heat shock 70 kDa protein
PDDEGFHF_01197 3.33e-265 dnaJ - - O ko:K03686 - ko00000,ko03029,ko03110 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PDDEGFHF_01198 1.46e-71 hisH - - E ko:K02501 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PDDEGFHF_01199 2.15e-11 hisF - - E ko:K02500 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PDDEGFHF_01200 6.23e-131 hisF - - E ko:K02500 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PDDEGFHF_01201 4.55e-74 hisI 3.5.4.19, 3.6.1.31 - E ko:K01496,ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PDDEGFHF_01202 2.63e-69 hisE 3.6.1.31 - E ko:K01523 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 phosphoribosyl-ATP diphosphatase activity
PDDEGFHF_01203 9.02e-255 hisC 2.6.1.9 - E ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PDDEGFHF_01204 0.0 lepA - - M ko:K03596 ko05134,map05134 ko00000,ko00001 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PDDEGFHF_01206 9.14e-146 pgm1 - - G - - - phosphoglycerate mutase
PDDEGFHF_01207 2.83e-140 - - - C - - - aldo keto reductase
PDDEGFHF_01208 5.06e-259 serC 2.6.1.52 - E ko:K00831 ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PDDEGFHF_01209 1.2e-281 serA 1.1.1.399, 1.1.1.95 - EH ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDDEGFHF_01210 0.0 - - - K - - - COG COG0846 NAD-dependent protein deacetylases, SIR2 family
PDDEGFHF_01211 2.35e-104 - - - K - - - 2 iron, 2 sulfur cluster binding
PDDEGFHF_01212 1.97e-106 ribH 2.5.1.78 - H ko:K00794 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PDDEGFHF_01213 6.78e-291 ribBA 3.5.4.25, 4.1.99.12 - H ko:K14652 ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
PDDEGFHF_01214 1.52e-137 ribE 2.5.1.9 - H ko:K00793 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Riboflavin synthase
PDDEGFHF_01215 1.98e-258 ribD 1.1.1.193, 3.5.4.26 - H ko:K11752 ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024 ko00000,ko00001,ko00002,ko01000 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PDDEGFHF_01216 2.01e-70 - - - C - - - FMN binding
PDDEGFHF_01217 6.59e-76 - - - T - - - His Kinase A (phosphoacceptor) domain
PDDEGFHF_01218 8.9e-62 - - - T - - - Transcriptional regulatory protein, C terminal
PDDEGFHF_01219 2.49e-19 - - - S - - - ABC-type transport system involved in multi-copper enzyme maturation permease component
PDDEGFHF_01220 3.17e-281 iscS 2.8.1.7 - E ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Aminotransferase class V
PDDEGFHF_01222 2e-45 feoA - - P ko:K04758 - ko00000,ko02000 FeoA domain
PDDEGFHF_01223 0.0 feoB - - P ko:K04759 - ko00000,ko02000 transporter of a GTP-driven Fe(2 ) uptake system
PDDEGFHF_01224 1.25e-31 - - - S - - - Virus attachment protein p12 family
PDDEGFHF_01225 4.47e-201 menA 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 1,4-dihydroxy-2-naphthoate
PDDEGFHF_01226 2.2e-227 hepT 2.5.1.30 - H ko:K00805 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Belongs to the FPP GGPP synthase family
PDDEGFHF_01227 6.92e-235 - 1.1.1.28 - CH ko:K03778 ko00620,ko01120,map00620,map01120 ko00000,ko00001,ko01000 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDDEGFHF_01228 9.06e-279 aspB3 - - E - - - DegT/DnrJ/EryC1/StrS aminotransferase family
PDDEGFHF_01229 3.8e-92 aroK 2.7.1.71 - F ko:K00891 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PDDEGFHF_01230 2.37e-250 tyrA 1.3.1.12 - E ko:K04517 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 prephenate dehydrogenase
PDDEGFHF_01231 9.14e-300 aroA 2.5.1.19 - E ko:K00800 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PDDEGFHF_01232 4.48e-131 - - - - - - - -
PDDEGFHF_01233 4.02e-139 aroC 4.2.3.5 - E ko:K01736 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PDDEGFHF_01234 6.04e-119 aroC 4.2.3.5 - E ko:K01736 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PDDEGFHF_01235 7.56e-15 aroH 5.4.99.5 - E ko:K04516 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Chorismate mutase
PDDEGFHF_01236 8.63e-274 - - - G - - - Major Facilitator Superfamily
PDDEGFHF_01238 0.0 dtpT - - U ko:K03305 - ko00000 amino acid peptide transporter
PDDEGFHF_01241 1.51e-194 supH - - S - - - Sucrose-6F-phosphate phosphohydrolase
PDDEGFHF_01242 7.06e-58 - - - GM - - - NAD(P)H-binding
PDDEGFHF_01243 6.38e-118 - - - GM - - - NAD(P)H-binding
PDDEGFHF_01244 4.19e-203 - - - S - - - Alpha beta hydrolase
PDDEGFHF_01245 5.61e-301 lmrB - - U ko:K18926 - ko00000,ko00002,ko02000 Belongs to the major facilitator superfamily
PDDEGFHF_01247 0.0 yfhO - - S - - - Bacterial membrane protein YfhO
PDDEGFHF_01248 1.07e-55 - - - - - - - -
PDDEGFHF_01249 1.2e-264 - - - EGP - - - Major Facilitator
PDDEGFHF_01250 8.97e-274 ycsG - - P - - - Natural resistance-associated macrophage protein
PDDEGFHF_01251 2.85e-163 - - - S ko:K07160 - ko00000 LamB/YcsF family
PDDEGFHF_01252 0.0 accC 6.3.4.14, 6.4.1.2 - I ko:K01961 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Acetyl-CoA carboxylase biotin carboxylase subunit
PDDEGFHF_01253 1.12e-86 - - - I ko:K02160 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PDDEGFHF_01254 8.19e-244 kipA - - E ko:K06350 - ko00000 Allophanate hydrolase subunit 2
PDDEGFHF_01255 1.8e-171 kipI - - E ko:K06351 - ko00000 Allophanate hydrolase subunit 1
PDDEGFHF_01256 9.05e-93 - - - K - - - helix_turn_helix, mercury resistance
PDDEGFHF_01257 4.35e-108 - - - S - - - Psort location Cytoplasmic, score
PDDEGFHF_01258 0.0 umuC - - L ko:K03502 - ko00000,ko03400 impB/mucB/samB family C-terminal domain
PDDEGFHF_01259 1.03e-123 - - - K - - - Acetyltransferase (GNAT) family
PDDEGFHF_01260 3.07e-135 - - - NU - - - mannosyl-glycoprotein
PDDEGFHF_01261 4.6e-249 asnA 6.3.1.1 - F ko:K01914 ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230 ko00000,ko00001,ko01000 aspartate--ammonia ligase
PDDEGFHF_01262 3.54e-31 ysaA 3.1.3.5, 3.8.1.2 - S ko:K01560,ko:K07025,ko:K08723 ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
PDDEGFHF_01263 7.07e-273 metE 2.1.1.14 - E ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 methionine synthase, vitamin-B12 independent
PDDEGFHF_01264 1.62e-115 luxS 4.4.1.21 - H ko:K07173 ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111 ko00000,ko00001,ko00002,ko01000 Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PDDEGFHF_01265 8.11e-52 - - - S - - - Cytochrome B5
PDDEGFHF_01269 2.85e-127 ycnB - - U - - - Belongs to the major facilitator superfamily
PDDEGFHF_01270 3.54e-158 ycnB - - U - - - Belongs to the major facilitator superfamily
PDDEGFHF_01271 9.36e-124 - - - K - - - transcriptional regulator
PDDEGFHF_01272 8.59e-142 - - - L - - - AlwI restriction endonuclease
PDDEGFHF_01273 1.49e-189 dcm 2.1.1.37 - H ko:K00558 ko00270,ko01100,ko05206,map00270,map01100,map05206 ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036 C-5 cytosine-specific DNA methylase
PDDEGFHF_01274 7.83e-227 - 3.4.11.5 - E ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 Releases the N-terminal proline from various substrates
PDDEGFHF_01275 5.93e-149 - - - S - - - HAD hydrolase, family IA, variant
PDDEGFHF_01276 0.0 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2325)
PDDEGFHF_01277 8.41e-235 - 1.17.4.1 - F ko:K00526 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Ribonucleotide reductase, small chain
PDDEGFHF_01278 3.1e-216 nrdF 1.17.4.1 - F ko:K00526 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Ribonucleotide reductase, small chain
PDDEGFHF_01279 0.0 nrdE 1.17.4.1 - F ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDDEGFHF_01280 1.64e-108 nrdI - - F ko:K03647 - ko00000 NrdI Flavodoxin like
PDDEGFHF_01281 3.38e-140 yciB - - M - - - ErfK YbiS YcfS YnhG
PDDEGFHF_01282 3.86e-261 yngD - - S ko:K07097 - ko00000 DHHA1 domain
PDDEGFHF_01283 0.0 - - - S - - - ABC transporter, ATP-binding protein
PDDEGFHF_01284 3.41e-232 ABC-SBP - - S ko:K01989 - ko00000,ko00002,ko02000 ABC transporter
PDDEGFHF_01285 3.76e-193 XK27_08840 - - U ko:K05832 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
PDDEGFHF_01286 2.77e-172 XK27_08845 - - S ko:K05833 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PDDEGFHF_01287 6.23e-286 amt - - P ko:K03320 - ko00000,ko02000 ammonium transporter
PDDEGFHF_01288 7.48e-298 mepA - - V ko:K18908 - ko00000,ko00002,ko01504,ko02000 MATE efflux family protein
PDDEGFHF_01289 2.77e-217 scrK 2.7.1.4 - GK ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 ko00000,ko00001,ko01000 ROK family
PDDEGFHF_01290 3.12e-71 pgi 5.3.1.9 - G ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GPI family
PDDEGFHF_01291 8.69e-167 - - - F - - - NUDIX domain
PDDEGFHF_01292 8.61e-143 pncA - - Q - - - Isochorismatase family
PDDEGFHF_01293 0.0 nadC2 6.3.4.21 - F ko:K00763 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PDDEGFHF_01294 8.07e-126 - - - S - - - Pfam:DUF3816
PDDEGFHF_01295 1.57e-180 - - - G - - - MucBP domain
PDDEGFHF_01296 1e-174 proC 1.5.1.2 - E ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PDDEGFHF_01297 4.44e-208 - - - EG - - - EamA-like transporter family
PDDEGFHF_01298 6.84e-315 yxbA 6.3.1.12 - S ko:K17810 - ko00000,ko01000 ATP-grasp enzyme
PDDEGFHF_01301 2.71e-200 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PDDEGFHF_01302 2.08e-84 - - - K - - - Transcriptional regulator, GntR family
PDDEGFHF_01303 7.62e-219 rfbB 4.2.1.46 - M ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PDDEGFHF_01304 5.72e-130 - - - M - - - Dolichyl-phosphate-mannose-protein mannosyltransferase
PDDEGFHF_01305 3.73e-26 - - - S - - - Glycosyltransferase like family 2
PDDEGFHF_01306 1.08e-93 - - - S - - - Bacterial membrane protein, YfhO
PDDEGFHF_01307 0.0 prfC - - J ko:K02837 - ko00000,ko03012 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PDDEGFHF_01308 1.62e-239 - - - S - - - Psort location CytoplasmicMembrane, score
PDDEGFHF_01309 4.04e-285 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I
PDDEGFHF_01310 5.89e-231 yxeI 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PDDEGFHF_01311 7.19e-260 xerS - - L ko:K04763 - ko00000,ko03036 Belongs to the 'phage' integrase family
PDDEGFHF_01312 3.78e-79 ywkB - - S ko:K07088 - ko00000 Membrane transport protein
PDDEGFHF_01313 6.95e-301 icd 1.1.1.42 - C ko:K00031 ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146 br01601,ko00000,ko00001,ko00002,ko01000 Isocitrate/isopropylmalate dehydrogenase
PDDEGFHF_01314 1.57e-194 pdxK 2.7.1.35 - H ko:K00868 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko01000 Phosphomethylpyrimidine kinase
PDDEGFHF_01315 1.07e-104 - - - S - - - ECF-type riboflavin transporter, S component
PDDEGFHF_01316 4.84e-215 yvgN - - C - - - Aldo keto reductase
PDDEGFHF_01317 1.45e-206 - - - S - - - DUF218 domain
PDDEGFHF_01319 1.41e-06 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2316)
PDDEGFHF_01320 7.8e-124 - 2.3.1.128 - K ko:K03790 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
PDDEGFHF_01321 2.58e-209 - - - I - - - alpha/beta hydrolase fold
PDDEGFHF_01322 9.99e-161 - - - S - - - Phage minor capsid protein 2
PDDEGFHF_01325 1.89e-276 - - - E - - - Aminotransferase
PDDEGFHF_01326 1.38e-236 - 4.3.1.12 - E ko:K01750 ko00330,ko01110,ko01130,ko01230,map00330,map01110,map01130,map01230 ko00000,ko00001,ko01000 Ornithine cyclodeaminase/mu-crystallin family
PDDEGFHF_01327 1.94e-281 - - - EGP ko:K08368 - ko00000,ko02000 Sugar (and other) transporter
PDDEGFHF_01328 2.67e-125 - 2.4.2.7 - F ko:K00759 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000,ko04147 Phosphoribosyl transferase domain
PDDEGFHF_01339 3.21e-05 - - - K - - - Transcriptional regulator
PDDEGFHF_01340 1.1e-17 ebrB - - U ko:K03297,ko:K11814,ko:K11815 - ko00000,ko00002,ko02000 Small Multidrug Resistance protein
PDDEGFHF_01341 8.27e-184 artP - - ET ko:K02030 - ko00000,ko00002,ko02000 Bacterial periplasmic substrate-binding proteins
PDDEGFHF_01342 6.44e-145 arpJ - - P ko:K02029,ko:K02030 - ko00000,ko00002,ko02000 ABC transporter permease
PDDEGFHF_01343 0.0 nrdD 1.1.98.6 - F ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Ribonucleoside-triphosphate reductase
PDDEGFHF_01344 2.56e-145 nrdG 1.97.1.4 - O ko:K04068 - ko00000,ko01000 Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PDDEGFHF_01345 1.07e-208 - - - O - - - Uncharacterized protein family (UPF0051)
PDDEGFHF_01346 2.63e-301 - - - F ko:K03458 - ko00000 Permease
PDDEGFHF_01347 1.74e-255 adh 1.1.1.1 - C ko:K00001,ko:K18369 ko00010,ko00071,ko00350,ko00625,ko00626,ko00640,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00640,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 Zinc-binding dehydrogenase
PDDEGFHF_01348 2.41e-87 - - - M - - - LysM domain protein
PDDEGFHF_01349 3.6e-112 ykhA 3.1.2.20 - I ko:K01073 - ko00000,ko01000 Thioesterase superfamily
PDDEGFHF_01350 6.84e-103 hsp1 - - O ko:K13993 ko04141,map04141 ko00000,ko00001,ko03110 Belongs to the small heat shock protein (HSP20) family
PDDEGFHF_01351 3.96e-122 - - - K - - - Transcriptional regulator, TetR family
PDDEGFHF_01352 0.0 gyrA 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDDEGFHF_01353 0.0 gyrB 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDDEGFHF_01354 3.04e-259 recF - - L ko:K03629 ko03440,map03440 ko00000,ko00001,ko03400 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PDDEGFHF_01355 1.45e-46 yaaA - - S ko:K14761 - ko00000,ko03009 S4 domain protein YaaA
PDDEGFHF_01356 3.2e-264 dnaN 2.7.7.7 - L ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PDDEGFHF_01357 9.49e-317 dnaA - - L ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PDDEGFHF_01359 7.96e-21 rpmH - - J ko:K02914 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL34 family
PDDEGFHF_01360 2.64e-75 rnpA 3.1.26.5 - J ko:K03536 - ko00000,ko01000,ko03016 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PDDEGFHF_01361 4.99e-187 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PDDEGFHF_01362 1.83e-198 jag - - S ko:K06346 - ko00000 R3H domain protein
PDDEGFHF_01363 0.0 mnmE - - S ko:K03650 - ko00000,ko01000,ko03016 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PDDEGFHF_01364 0.0 gidA - - D ko:K03495 - ko00000,ko03016,ko03036 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PDDEGFHF_01365 1.77e-76 mscL - - M ko:K03282 - ko00000,ko02000 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PDDEGFHF_01366 4.35e-284 lysP - - E ko:K03293,ko:K11733 - ko00000,ko02000 amino acid
PDDEGFHF_01367 0.0 asnB 6.3.5.4 - E ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 ko00000,ko00001,ko01000,ko01002 Asparagine synthase
PDDEGFHF_01368 0.0 murE 6.3.2.13, 6.3.2.7 - M ko:K01928,ko:K05362 ko00300,ko00550,ko01100,map00300,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PDDEGFHF_01369 0.0 murE 6.3.2.13, 6.3.2.7 - M ko:K01928,ko:K05362 ko00300,ko00550,ko01100,map00300,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PDDEGFHF_01370 1.16e-146 lepB 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
PDDEGFHF_01371 8.83e-209 - - - F ko:K15051 - ko00000 DNA/RNA non-specific endonuclease
PDDEGFHF_01372 8.27e-111 - - - L - - - nuclease
PDDEGFHF_01373 0.0 thrS 6.1.1.3 - J ko:K01868 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PDDEGFHF_01374 8.6e-69 - - - - - - - -
PDDEGFHF_01375 0.0 mntH - - P ko:K03322 - ko00000,ko02000 H( )-stimulated, divalent metal cation uptake system
PDDEGFHF_01376 5.52e-241 - - - E - - - Zinc-binding dehydrogenase
PDDEGFHF_01377 1.58e-138 - - - K - - - Bacterial regulatory proteins, tetR family
PDDEGFHF_01378 2.23e-206 yxeA - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
PDDEGFHF_01379 2.9e-158 lolD - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PDDEGFHF_01380 7.5e-100 argR - - K ko:K03402 - ko00000,ko03000 Regulates arginine biosynthesis genes
PDDEGFHF_01381 5.05e-61 czrA - - K ko:K22043 - ko00000,ko03000 Transcriptional regulator, ArsR family
PDDEGFHF_01382 4.36e-301 - 3.2.1.17 CBM50 NU ko:K01185,ko:K02395,ko:K19223 - ko00000,ko01000,ko01002,ko01011,ko02035 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PDDEGFHF_01383 4.26e-218 scrR - - K ko:K02529,ko:K03484 - ko00000,ko03000 Transcriptional regulator, LacI family
PDDEGFHF_01384 1.11e-35 - - - - - - - -
PDDEGFHF_01385 9.74e-138 - - - - - - - -
PDDEGFHF_01386 6.55e-126 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PDDEGFHF_01387 8.72e-140 nnrE 5.1.99.6 - H ko:K17759 - ko00000,ko01000 Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX
PDDEGFHF_01388 7.49e-74 - - - - - - - -
PDDEGFHF_01389 2.32e-161 yrkL - - S - - - Flavodoxin-like fold
PDDEGFHF_01391 1.36e-85 yeaO - - S - - - Protein of unknown function, DUF488
PDDEGFHF_01392 2e-150 yxlJ 3.2.2.21 - L ko:K03652 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Belongs to the DNA glycosylase MPG family
PDDEGFHF_01393 1.35e-261 - - - S - - - associated with various cellular activities
PDDEGFHF_01394 2.5e-270 - - - S - - - Putative metallopeptidase domain
PDDEGFHF_01395 1.41e-59 - - - - - - - -
PDDEGFHF_01396 3e-291 pbuG - - S ko:K06901 - ko00000,ko02000 permease
PDDEGFHF_01397 0.0 pepO - - O ko:K07386 - ko00000,ko01000,ko01002 Peptidase family M13
PDDEGFHF_01398 2.44e-120 ymdB - - S - - - Macro domain protein
PDDEGFHF_01399 1.02e-186 pnuC - - H ko:K03811 - ko00000,ko02000 nicotinamide mononucleotide transporter
PDDEGFHF_01400 2.57e-104 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PDDEGFHF_01401 2.01e-215 - 1.1.1.399, 1.1.1.95 - CH ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDDEGFHF_01402 9.08e-71 - - - - - - - -
PDDEGFHF_01403 1.09e-180 tcyA - - ET ko:K02424 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko02035 Belongs to the bacterial solute-binding protein 3 family
PDDEGFHF_01404 3.51e-154 - - - U ko:K10009 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
PDDEGFHF_01405 8.36e-174 - - - E ko:K10010 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PDDEGFHF_01406 1.21e-48 - - - - - - - -
PDDEGFHF_01407 1.41e-124 - - - S ko:K06910 - ko00000 Phosphatidylethanolamine-binding protein
PDDEGFHF_01408 3.38e-185 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
PDDEGFHF_01409 1.2e-234 celE3 - - E - - - GDSL-like Lipase/Acylhydrolase family
PDDEGFHF_01410 1.2e-284 galK 2.7.1.6 - F ko:K00849 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PDDEGFHF_01411 0.0 galT 2.7.7.12 - G ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 ko00000,ko00001,ko00002,ko01000 UDP-glucose--hexose-1-phosphate uridylyltransferase
PDDEGFHF_01412 3.16e-234 galR - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator
PDDEGFHF_01413 0.0 rafA 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 alpha-galactosidase
PDDEGFHF_01414 0.0 lacS - - G ko:K11104,ko:K16209 - ko00000,ko02000 Transporter
PDDEGFHF_01415 1.72e-80 - - - S - - - overlaps another CDS with the same product name
PDDEGFHF_01416 3.3e-39 - - - S - - - Domain of unknown function (DUF5049)
PDDEGFHF_01417 7.39e-131 - - - S - - - Psort location Cytoplasmic, score
PDDEGFHF_01418 6.14e-279 - - - KL - - - DNA methylase
PDDEGFHF_01419 6.51e-93 - - - - - - - -
PDDEGFHF_01420 2.41e-111 - - - - - - - -
PDDEGFHF_01421 9.22e-317 - - - L - - - SNF2 family N-terminal domain
PDDEGFHF_01422 2.14e-62 - - - S - - - VRR_NUC
PDDEGFHF_01423 0.0 - - - S ko:K06919 - ko00000 Phage plasmid primase, P4
PDDEGFHF_01424 2.51e-90 - - - S - - - Psort location Cytoplasmic, score
PDDEGFHF_01425 0.0 - 2.7.7.7 - L ko:K02334 - ko00000,ko01000 DNA polymerase
PDDEGFHF_01426 2.71e-128 - - - S - - - Protein of unknown function (DUF2815)
PDDEGFHF_01427 3.01e-84 XK27_08315 - - M - - - Sulfatase
PDDEGFHF_01428 6.31e-232 XK27_08315 - - M - - - Sulfatase
PDDEGFHF_01429 5.86e-192 rbn - - S ko:K07058 - ko00000 Belongs to the UPF0761 family
PDDEGFHF_01430 4.37e-43 - - - S - - - Protein of unknown function (DUF2922)
PDDEGFHF_01432 2.05e-188 recX - - S ko:K03565 - ko00000,ko03400 Regulatory protein RecX
PDDEGFHF_01433 3.48e-152 rfbP - - M ko:K13012,ko:K19428 - ko00000,ko01000,ko01005 Bacterial sugar transferase
PDDEGFHF_01434 1.71e-191 cps1D - - M - - - Domain of unknown function (DUF4422)
PDDEGFHF_01435 1.1e-43 - - - M - - - biosynthesis protein
PDDEGFHF_01436 1.16e-80 - - - M - - - Domain of unknown function (DUF4422)
PDDEGFHF_01437 1.63e-90 - - - - - - - -
PDDEGFHF_01438 4.32e-107 - - - M - - - transferase activity, transferring glycosyl groups
PDDEGFHF_01439 1.11e-94 - - - M - - - Core-2/I-Branching enzyme
PDDEGFHF_01440 4.27e-61 - - - L - - - MULE transposase domain
PDDEGFHF_01443 2.52e-28 - - - - - - - -
PDDEGFHF_01444 4.49e-230 - - - U - - - type IV secretory pathway VirB4
PDDEGFHF_01446 2.33e-33 - - - M - - - CHAP domain
PDDEGFHF_01450 6.25e-07 ydiL - - S ko:K07052 - ko00000 protease
PDDEGFHF_01456 1.1e-26 - - - L - - - PFAM Integrase catalytic region
PDDEGFHF_01458 1.55e-120 - - - P - - - Cadmium resistance transporter
PDDEGFHF_01459 5.03e-43 ydzE - - EG - - - spore germination
PDDEGFHF_01460 8.58e-71 - 4.1.1.44 - O ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
PDDEGFHF_01461 6.72e-106 - - - - - - - -
PDDEGFHF_01462 0.0 - - - M - - - Iron Transport-associated domain
PDDEGFHF_01463 1.61e-130 - - - M ko:K14193 ko05150,map05150 ko00000,ko00001 Iron Transport-associated domain
PDDEGFHF_01464 3.25e-195 isdE - - P ko:K02016 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Periplasmic binding protein
PDDEGFHF_01465 8.57e-199 isdF - - U ko:K02015 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PDDEGFHF_01466 2.21e-181 - 3.6.3.34 - HP ko:K02013 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PDDEGFHF_01467 4.54e-301 proP - - EGP ko:K03761,ko:K03762 - ko00000,ko02000 Sugar (and other) transporter
PDDEGFHF_01468 0.0 cas9 - - L ko:K09952 - ko00000,ko01000,ko02048 CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
PDDEGFHF_01469 0.0 - - - M - - - 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PDDEGFHF_01470 2.05e-179 thiM 2.7.1.50 - H ko:K00878 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PDDEGFHF_01471 4.46e-184 thiD 2.7.1.49, 2.7.4.7 - H ko:K00941 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Phosphomethylpyrimidine kinase
PDDEGFHF_01472 5.05e-146 thiE 2.5.1.3 - H ko:K00788 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PDDEGFHF_01473 7.95e-191 thiD 2.7.1.49, 2.7.4.7 - H ko:K00941 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Phosphomethylpyrimidine kinase
PDDEGFHF_01474 5.69e-87 psiE - - S ko:K13256 - ko00000 Phosphate-starvation-inducible E
PDDEGFHF_01475 4.06e-60 rmeB - - K - - - transcriptional regulator, MerR family
PDDEGFHF_01476 2.89e-94 thiW - - S - - - Thiamine-precursor transporter protein (ThiW)
PDDEGFHF_01477 7.76e-53 - - - S ko:K16925 - ko00000,ko00002,ko02000 ABC-type cobalt transport system, permease component
PDDEGFHF_01478 4.07e-22 ykoE - - S ko:K16925 - ko00000,ko00002,ko02000 ABC-type cobalt transport system, permease component
PDDEGFHF_01479 4.82e-189 uppP 3.6.1.27 - V ko:K06153 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PDDEGFHF_01480 2.47e-40 - - - IQ - - - reductase
PDDEGFHF_01481 2.98e-23 - - - IQ - - - reductase
PDDEGFHF_01482 5.16e-15 fabG1 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PDDEGFHF_01488 4.69e-151 dgk2 - - F - - - deoxynucleoside kinase
PDDEGFHF_01489 0.0 lysP - - E ko:K03293,ko:K11733 - ko00000,ko02000 amino acid
PDDEGFHF_01491 3.45e-199 - - - I - - - alpha/beta hydrolase fold
PDDEGFHF_01492 3.13e-149 - - - I - - - phosphatase
PDDEGFHF_01493 8.17e-107 - - - S - - - Threonine/Serine exporter, ThrE
PDDEGFHF_01494 1.11e-160 - - - S - - - Putative threonine/serine exporter
PDDEGFHF_01497 2.58e-71 crcB - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDDEGFHF_01498 1.73e-72 crcB - - D ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDDEGFHF_01499 2.51e-90 - - - E - - - Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PDDEGFHF_01500 6.33e-133 - - - K - - - Acetyltransferase (GNAT) family
PDDEGFHF_01501 8.85e-205 ubiB - - S ko:K03688 - ko00000 ABC1 family
PDDEGFHF_01502 3.36e-166 ubiB - - S ko:K03688 - ko00000 ABC1 family
PDDEGFHF_01503 1.75e-165 - - - C - - - Oxidoreductase NAD-binding domain
PDDEGFHF_01504 7.04e-217 - - - GK - - - ROK family
PDDEGFHF_01505 7.62e-53 - - - - - - - -
PDDEGFHF_01506 2.83e-104 atkY - - K ko:K02171 ko01501,map01501 ko00000,ko00001,ko00002,ko01504,ko03000 Copper transport repressor CopY TcrY
PDDEGFHF_01508 1.86e-193 int2 - - L - - - Belongs to the 'phage' integrase family
PDDEGFHF_01509 5.56e-07 - - - M - - - Glycosyltransferase like family 2
PDDEGFHF_01510 1.43e-153 yckA - - E ko:K10009 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PDDEGFHF_01511 8.4e-200 yckB - - ET ko:K02030,ko:K02424 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko02035 Belongs to the bacterial solute-binding protein 3 family
PDDEGFHF_01512 8.17e-141 XK27_02070 - - S ko:K07078 - ko00000 Nitroreductase family
PDDEGFHF_01513 3.77e-93 rnhA 3.1.26.4 - L ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Ribonuclease HI
PDDEGFHF_01514 2.88e-91 esbA - - S - - - Family of unknown function (DUF5322)
PDDEGFHF_01515 1.04e-98 lspA 3.4.23.36 - MU ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PDDEGFHF_01516 2.57e-223 rluD 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
PDDEGFHF_01517 8.46e-264 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the CarA family
PDDEGFHF_01518 0.0 carB 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase
PDDEGFHF_01519 4.36e-155 - 4.2.1.1 - P ko:K01674 ko00910,map00910 ko00000,ko00001,ko01000 Eukaryotic-type carbonic anhydrase
PDDEGFHF_01520 3.14e-277 glf 5.4.99.9 - M ko:K01854 ko00052,ko00520,map00052,map00520 ko00000,ko00001,ko01000 UDP-galactopyranose mutase
PDDEGFHF_01521 2.17e-274 cps1C - - S ko:K03328 - ko00000 Membrane protein involved in the export of O-antigen and teichoic acid
PDDEGFHF_01522 9.46e-87 - - GT4 M ko:K02840 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 Glycosyl transferases group 1
PDDEGFHF_01523 1.28e-78 - - - S - - - enterobacterial common antigen metabolic process
PDDEGFHF_01524 1.84e-60 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NLP P60 protein
PDDEGFHF_01526 8.95e-55 - - - L - - - Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PDDEGFHF_01527 3.16e-50 - - - M - - - KxYKxGKxW signal domain protein
PDDEGFHF_01528 0.0 clpE - - O ko:K03697,ko:K04086 - ko00000,ko03110 Belongs to the ClpA ClpB family
PDDEGFHF_01529 2.41e-07 - - - - - - - -
PDDEGFHF_01530 2.14e-53 ptsH - - G ko:K11189 - ko00000,ko02000 phosphocarrier protein HPR
PDDEGFHF_01531 0.0 ptsI 2.7.3.9 - G ko:K08483 ko02060,map02060 ko00000,ko00001,ko01000,ko02000 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PDDEGFHF_01532 9.72e-295 pimB 2.4.1.337 GT4 M ko:K19002 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000,ko01003 Glycosyltransferase, group 1 family protein
PDDEGFHF_01533 3.81e-255 cpoA 2.4.1.208 GT4 M ko:K13677,ko:K13678 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000,ko01003 Glycosyltransferase, group 1 family protein
PDDEGFHF_01534 3.97e-231 mprF - - I ko:K07027 - ko00000,ko02000 Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PDDEGFHF_01535 1.14e-52 - - - S - - - Protein of unknown function (DUF1797)
PDDEGFHF_01536 6.36e-103 ctsR - - K ko:K03708 - ko00000,ko03000 Belongs to the CtsR family
PDDEGFHF_01537 0.0 clpC - - O ko:K03696 ko01100,map01100 ko00000,ko03110 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PDDEGFHF_01538 8.51e-137 - - - K - - - Bacterial regulatory proteins, tetR family
PDDEGFHF_01539 0.0 rpoB 2.7.7.6 - K ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDDEGFHF_01540 0.0 rpoC 2.7.7.6 - K ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDDEGFHF_01541 2.92e-173 puuD - - S ko:K07010 - ko00000,ko01002 peptidase C26
PDDEGFHF_01542 3.02e-275 - - - - - - - -
PDDEGFHF_01543 1.99e-39 pilD 3.4.23.43 - NOU ko:K02236,ko:K02506,ko:K02654 - ko00000,ko00002,ko01000,ko01002,ko02035,ko02044 aspartic-type endopeptidase activity
PDDEGFHF_01544 3.58e-93 rpsL - - J ko:K02950 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PDDEGFHF_01545 4.15e-108 rpsG - - J ko:K02992 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PDDEGFHF_01546 0.0 fusA - - J ko:K02355 - ko00000,ko03012,ko03029 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PDDEGFHF_01547 3.14e-66 rpsJ - - J ko:K02946 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Involved in the binding of tRNA to the ribosomes
PDDEGFHF_01548 5.89e-153 rplC - - J ko:K02906 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PDDEGFHF_01549 1.56e-137 rplD - - J ko:K02926 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the polypeptide exit tunnel
PDDEGFHF_01550 2.76e-60 rplW - - J ko:K02892 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PDDEGFHF_01551 3.32e-203 rplB - - J ko:K02886 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PDDEGFHF_01552 1.51e-62 rpsS - - J ko:K02965 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PDDEGFHF_01553 2.63e-71 rplV - - J ko:K02890 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PDDEGFHF_01554 3.43e-156 rpsC - - J ko:K02982 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PDDEGFHF_01555 2.78e-98 rplP - - J ko:K02878 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PDDEGFHF_01556 1.35e-38 rpmC - - J ko:K02904 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uL29 family
PDDEGFHF_01557 1.29e-54 rpsQ - - J ko:K02961 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PDDEGFHF_01558 2.55e-79 rplN - - J ko:K02874 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PDDEGFHF_01559 1.28e-65 rplX - - J ko:K02895 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PDDEGFHF_01560 7.13e-123 rplE - - J ko:K02931 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PDDEGFHF_01561 2.46e-40 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PDDEGFHF_01562 7.64e-88 rpsH - - J ko:K02994 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PDDEGFHF_01563 2.05e-121 rplF - - J ko:K02933 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PDDEGFHF_01564 5.55e-75 rplR - - J ko:K02881 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PDDEGFHF_01565 3.59e-113 rpsE - - J ko:K02988 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PDDEGFHF_01566 6.96e-33 rpmD - - J ko:K02907 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L30
PDDEGFHF_01567 3.5e-92 rplO - - J ko:K02876 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
PDDEGFHF_01568 3.19e-300 secY - - U ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PDDEGFHF_01569 2.16e-156 adk 2.7.4.3 - F ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PDDEGFHF_01570 9.82e-45 infA - - J ko:K02518 - ko00000,ko03012 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PDDEGFHF_01571 6.38e-20 rpmJ - - J ko:K02919 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL36 family
PDDEGFHF_01572 1.32e-76 rpsM - - J ko:K02952 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PDDEGFHF_01573 8.02e-84 rpsK - - J ko:K02948 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PDDEGFHF_01574 3.48e-217 rpoA 2.7.7.6 - K ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDDEGFHF_01575 1.7e-79 rplQ - - J ko:K02879 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L17
PDDEGFHF_01576 1.5e-193 ecfA1 - - P ko:K16786 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDDEGFHF_01577 2.06e-201 ecfA2 - - P ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDDEGFHF_01578 1.6e-178 ecfT - - U ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDDEGFHF_01579 8.08e-188 truA 5.4.99.12 - J ko:K06173 - ko00000,ko01000,ko03016 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PDDEGFHF_01580 5.57e-104 rplM - - J ko:K02871 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PDDEGFHF_01581 2.78e-85 rpsI - - J ko:K02996 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS9 family
PDDEGFHF_01582 1.03e-263 - - - S - - - interspecies interaction between organisms
PDDEGFHF_01583 8.64e-178 budC 1.1.1.304, 1.1.1.76 - IQ ko:K03366 ko00650,map00650 ko00000,ko00001,ko01000 reductase
PDDEGFHF_01584 2.33e-142 acmA 3.2.1.17, 3.2.1.96 - NU ko:K01185,ko:K01227 ko00511,map00511 ko00000,ko00001,ko01000 mannosyl-glycoprotein
PDDEGFHF_01585 3.89e-132 xpt 2.4.2.22 - F ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000 Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PDDEGFHF_01586 7.47e-280 purK2 6.3.4.18 - F ko:K01589 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PDDEGFHF_01587 0.0 pcrA 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase
PDDEGFHF_01588 0.0 ligA 6.5.1.2 - L ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 ko00000,ko00001,ko01000,ko03032,ko03400 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PDDEGFHF_01589 1.94e-233 camS - - S - - - sex pheromone
PDDEGFHF_01590 9.93e-65 gatC 6.3.5.6, 6.3.5.7 - J ko:K02435 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PDDEGFHF_01591 0.0 gatA 6.3.5.6, 6.3.5.7 - J ko:K02433 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PDDEGFHF_01592 0.0 gatB 6.3.5.6, 6.3.5.7 - J ko:K02434 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PDDEGFHF_01593 8.8e-238 dagK 2.7.1.107 - G ko:K07029 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko01000 Lipid kinase
PDDEGFHF_01594 0.0 rumA_2 2.1.1.190 - J ko:K03215 - ko00000,ko01000,ko03009 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PDDEGFHF_01595 0.0 - - - M - - - domain protein
PDDEGFHF_01596 8.23e-23 - 2.1.1.303 - K ko:K04096,ko:K20421 ko01059,ko01130,map01059,map01130 ko00000,ko00001,ko00002,ko01000 DNA-binding transcription factor activity
PDDEGFHF_01597 0.0 - - - L - - - Recombinase
PDDEGFHF_01598 0.0 - - - L - - - Recombinase zinc beta ribbon domain
PDDEGFHF_01599 4.01e-44 - - - - - - - -
PDDEGFHF_01600 4.36e-89 - - - S - - - Bacteriophage holin family
PDDEGFHF_01601 2.93e-85 - - - S - - - Phage head-tail joining protein
PDDEGFHF_01602 2.17e-57 - - - S - - - Phage gp6-like head-tail connector protein
PDDEGFHF_01603 4.15e-278 - - - S - - - Phage capsid family
PDDEGFHF_01604 4.66e-156 - 3.4.21.92 - OU ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S14 family
PDDEGFHF_01605 6.79e-310 - - - S - - - Phage portal protein
PDDEGFHF_01606 4.24e-257 - - - S - - - overlaps another CDS with the same product name
PDDEGFHF_01607 2.03e-250 bdhA 1.1.1.14, 1.1.1.264, 1.1.1.303, 1.1.1.4 - C ko:K00004,ko:K00008,ko:K00098 ko00040,ko00051,ko00650,ko01100,map00040,map00051,map00650,map01100 ko00000,ko00001,ko00002,ko01000 Zinc-binding dehydrogenase
PDDEGFHF_01608 9.78e-231 - - - C - - - Zinc-binding dehydrogenase
PDDEGFHF_01609 7.95e-132 - - - P ko:K05846 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, permease protein
PDDEGFHF_01610 6.34e-179 proV - - E ko:K05847 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, ATP-binding protein
PDDEGFHF_01611 1.8e-138 proWZ - - P ko:K05846 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
PDDEGFHF_01612 2.84e-209 proWY - - M ko:K05845 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, substrate-binding protein, QAT family
PDDEGFHF_01613 8.57e-92 ywnA - - K - - - Transcriptional regulator
PDDEGFHF_01614 5.23e-97 - - - O ko:K07397 - ko00000 OsmC-like protein
PDDEGFHF_01615 9.22e-96 paiA 2.3.1.57 - K ko:K22441 - ko00000,ko01000 Acetyltransferase (GNAT) domain
PDDEGFHF_01616 7.45e-28 - - - EGP ko:K08166 - ko00000,ko02000 Major Facilitator Superfamily
PDDEGFHF_01617 8.35e-121 - - - L - - - Probable transposase
PDDEGFHF_01618 1.03e-121 tnpA1 - - L - - - PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PDDEGFHF_01619 8.32e-66 - - - - - - - -
PDDEGFHF_01620 1.79e-267 - - - E - - - Major Facilitator Superfamily
PDDEGFHF_01621 0.0 dnaB 3.6.4.12 - L ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Participates in initiation and elongation during chromosome replication
PDDEGFHF_01622 2.63e-99 rplI - - J ko:K02939 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
PDDEGFHF_01623 0.0 yybT - - T - - - signaling protein consisting of a modified GGDEF domain and a DHH domain
PDDEGFHF_01624 1.33e-47 rpsR - - J ko:K02963 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PDDEGFHF_01625 7.22e-153 ssb - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PDDEGFHF_01626 6.02e-64 rpsF - - J ko:K02990 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Binds together with S18 to 16S ribosomal RNA
PDDEGFHF_01627 8.17e-286 aadAT - - EK ko:K05825 ko00300,ko01100,ko01130,ko01210,map00300,map01100,map01130,map01210 ko00000,ko00001,ko01000 Aminotransferase, class I
PDDEGFHF_01628 1.04e-194 gshAB 6.3.2.2 - H ko:K01919 ko00270,ko00480,ko01100,map00270,map00480,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the glutamate--cysteine ligase type 1 family
PDDEGFHF_01629 8.93e-185 artP - - ET ko:K02030 - ko00000,ko00002,ko02000 Bacterial periplasmic substrate-binding proteins
PDDEGFHF_01631 9.75e-280 - - - I - - - transferase activity, transferring acyl groups other than amino-acyl groups
PDDEGFHF_01633 1.48e-119 padC - - Q ko:K13727 - ko00000,ko01000 Phenolic acid decarboxylase
PDDEGFHF_01634 4.16e-127 - - - K - - - Virulence activator alpha C-term
PDDEGFHF_01635 2.77e-103 ndk 2.7.4.6 - F ko:K00940 ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016 ko00000,ko00001,ko00002,ko01000,ko04131 Belongs to the NDK family
PDDEGFHF_01636 1.77e-130 - - - K - - - DNA-templated transcription, initiation
PDDEGFHF_01638 0.0 - - - N ko:K09384 - ko00000 Uncharacterized conserved protein (DUF2075)
PDDEGFHF_01639 0.0 alsS 2.2.1.6 - EH ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the TPP enzyme family
PDDEGFHF_01640 9.89e-76 ybbL - - S ko:K02068 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PDDEGFHF_01641 4.05e-53 ybbL - - S ko:K02068 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PDDEGFHF_01642 1.87e-171 ybbM - - S ko:K02069 - ko00000,ko00002,ko02000 Uncharacterised protein family (UPF0014)
PDDEGFHF_01643 2.29e-80 rmeB - - K - - - transcriptional regulator, MerR family
PDDEGFHF_01645 0.0 copB 3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54 - P ko:K01533,ko:K01534,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 P-type ATPase
PDDEGFHF_01646 3.01e-97 atkY - - K ko:K02171 ko01501,map01501 ko00000,ko00001,ko00002,ko01504,ko03000 Transcriptional regulator
PDDEGFHF_01647 8.85e-133 pinR1 - - L - - - Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
PDDEGFHF_01648 1.75e-151 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PDDEGFHF_01649 3.46e-225 yxeA - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
PDDEGFHF_01650 1.39e-93 crtM 2.5.1.32, 2.5.1.96, 2.5.1.99 - I ko:K02291,ko:K10208 ko00906,ko01062,ko01100,ko01110,map00906,map01062,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 Squalene/phytoene synthase
PDDEGFHF_01651 9.82e-79 - - - T - - - PemK-like, MazF-like toxin of type II toxin-antitoxin system
PDDEGFHF_01652 1.25e-79 - - - - - - - -
PDDEGFHF_01653 2.75e-231 - - - S - - - Recombinase
PDDEGFHF_01655 9.69e-209 comGB - - NU ko:K02244 - ko00000,ko00002,ko02044 type II secretion system
PDDEGFHF_01656 1.09e-227 comGA - - NU ko:K02243 - ko00000,ko00002,ko02044 Type II IV secretion system protein
PDDEGFHF_01657 0.0 ykcB - - M - - - Dolichyl-phosphate-mannose-protein mannosyltransferase
PDDEGFHF_01658 5.27e-237 hoxN - - U ko:K07241 - ko00000,ko02000 High-affinity nickel-transport protein
PDDEGFHF_01659 3.27e-191 larE - - S ko:K06864 - ko00000 NAD synthase
PDDEGFHF_01660 1.33e-166 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
PDDEGFHF_01661 1.3e-301 larC 4.99.1.12 - S ko:K09121 - ko00000,ko01000 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
PDDEGFHF_01662 2.36e-168 larB - - S ko:K06898 - ko00000 AIR carboxylase
PDDEGFHF_01663 1.24e-305 larA 5.1.2.1 - S ko:K22373 ko00620,map00620 ko00000,ko00001,ko01000 Domain of unknown function (DUF2088)
PDDEGFHF_01664 1.24e-160 rcfB - - K - - - Crp-like helix-turn-helix domain
PDDEGFHF_01665 0.0 mycA 4.2.1.53 - S ko:K10254 - ko00000,ko01000 MCRA family
PDDEGFHF_01667 0.0 gshR3 1.8.1.7 - C ko:K00383 ko00480,ko04918,map00480,map04918 ko00000,ko00001,ko01000 Glutathione reductase
PDDEGFHF_01668 1.39e-57 glpQ 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 glycerophosphoryl diester phosphodiesterase
PDDEGFHF_01669 0.0 cidC 1.2.3.3 - EH ko:K00158 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000 Belongs to the TPP enzyme family
PDDEGFHF_01670 4.56e-77 - - - L ko:K07497 - ko00000 hmm pf00665
PDDEGFHF_01671 0.0 yifK - - E ko:K03293 - ko00000 Amino acid permease
PDDEGFHF_01673 0.0 dxs 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PDDEGFHF_01674 9.53e-305 - - - N ko:K09384 - ko00000 Uncharacterized conserved protein (DUF2075)
PDDEGFHF_01675 3.83e-71 - - - S - - - SNARE associated Golgi protein
PDDEGFHF_01676 1.17e-34 - - - S - - - Psort location CytoplasmicMembrane, score
PDDEGFHF_01677 2.43e-218 yueF - - S - - - AI-2E family transporter
PDDEGFHF_01678 1.33e-203 yfdH - GT2 M ko:K12999 - ko00000,ko01000,ko01003,ko01005 Glycosyltransferase, group 2 family protein
PDDEGFHF_01679 4.14e-09 - - - - - - - -
PDDEGFHF_01680 2.85e-68 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NLP P60 protein
PDDEGFHF_01681 1.26e-42 cspC - - K ko:K03704 - ko00000,ko03000 Cold shock protein
PDDEGFHF_01682 2.51e-158 mntR - - K ko:K03709 - ko00000,ko03000 iron dependent repressor
PDDEGFHF_01683 4.36e-209 - - - P ko:K16264 - ko00000,ko02000 cation diffusion facilitator family transporter
PDDEGFHF_01684 8.48e-147 - - - S - - - membrane
PDDEGFHF_01685 7.81e-141 - - - S - - - VIT family
PDDEGFHF_01686 2.49e-110 - - - T - - - Belongs to the universal stress protein A family
PDDEGFHF_01687 4.75e-28 elaA - - S ko:K02348 - ko00000 acyltransferase COG2153
PDDEGFHF_01688 4.6e-284 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
PDDEGFHF_01689 0.0 rnjA - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PDDEGFHF_01690 1.15e-77 - - - - - - - -
PDDEGFHF_01691 3.98e-96 - - - K - - - MerR HTH family regulatory protein
PDDEGFHF_01692 0.0 ycnB - - U - - - Belongs to the major facilitator superfamily
PDDEGFHF_01693 4.73e-150 - - - S - - - Domain of unknown function (DUF4811)
PDDEGFHF_01694 1.74e-187 araA 5.3.1.4 - G ko:K01804 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of L-arabinose to L-ribulose
PDDEGFHF_01695 2.46e-216 yjbO 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
PDDEGFHF_01697 0.0 mprF 2.3.2.3 - S ko:K14205 ko01503,ko02020,ko05150,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01000,ko01504 Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PDDEGFHF_01698 2.36e-137 - 3.5.1.124 - S ko:K03152 - ko00000,ko01000,ko01002 DJ-1/PfpI family
PDDEGFHF_01699 3.88e-241 - - - I - - - Alpha beta
PDDEGFHF_01700 5.7e-154 - 3.2.2.27 - L ko:K21929 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Uracil-DNA glycosylase
PDDEGFHF_01701 0.0 - - - S - - - Putative threonine/serine exporter
PDDEGFHF_01702 2.63e-208 mleR2 - - K - - - LysR family transcriptional regulator
PDDEGFHF_01703 2.6e-186 - - - I - - - Alpha/beta hydrolase family
PDDEGFHF_01704 0.0 citG 2.4.2.52 - H ko:K05966 ko02020,map02020 ko00000,ko00001,ko01000 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PDDEGFHF_01705 0.0 citF 2.8.3.10 - H ko:K01643 ko02020,map02020 ko00000,ko00001,ko01000 Citrate (pro-3S)-lyase alpha chain
PDDEGFHF_01706 7.54e-210 citE 4.1.3.34 - G ko:K01644 ko02020,map02020 ko00000,ko00001,ko01000 Belongs to the HpcH HpaI aldolase family
PDDEGFHF_01707 3.36e-61 citD - - C ko:K01646 ko02020,map02020 ko00000,ko00001 Covalent carrier of the coenzyme of citrate lyase
PDDEGFHF_01708 3.95e-251 citC 6.2.1.22 - H ko:K01910 ko02020,map02020 ko00000,ko00001,ko01000 Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
PDDEGFHF_01709 1.21e-266 mae 1.1.1.38 - C ko:K00027 ko00620,ko01200,ko02020,map00620,map01200,map02020 ko00000,ko00001,ko01000 Malic enzyme, NAD binding domain
PDDEGFHF_01710 2.47e-222 citR - - K - - - sugar-binding domain protein
PDDEGFHF_01711 1.23e-311 citP - - P ko:K03319 - ko00000 Sodium:sulfate symporter transmembrane region
PDDEGFHF_01712 1.63e-210 ldh 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily. LDH family
PDDEGFHF_01713 4.45e-275 frdA 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
PDDEGFHF_01714 3.78e-282 fumC 4.2.1.2 - C ko:K01679 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211 ko00000,ko00001,ko00002,ko01000 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PDDEGFHF_01715 2.48e-117 - - - S - - - NADPH-dependent FMN reductase
PDDEGFHF_01716 1.43e-233 XK27_09615 1.5.1.36 - S ko:K19784,ko:K22393 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 reductase
PDDEGFHF_01717 2.14e-287 mleS 1.1.1.38, 4.1.1.101 - C ko:K00027,ko:K22212 ko00620,ko01120,ko01200,ko02020,map00620,map01120,map01200,map02020 ko00000,ko00001,ko01000 Malic enzyme
PDDEGFHF_01718 6.84e-100 mleR - - K - - - LysR family
PDDEGFHF_01719 9.51e-57 - - - I - - - alpha/beta hydrolase fold
PDDEGFHF_01720 1.87e-139 ppiB 5.2.1.8 - G ko:K03768 - ko00000,ko01000,ko03110 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PDDEGFHF_01721 0.0 scrA 2.7.1.211 - G ko:K02808,ko:K02809,ko:K02810 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
PDDEGFHF_01722 5.8e-250 adh 1.1.1.1 - C ko:K13953 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 Zinc-binding alcohol dehydrogenase family protein
PDDEGFHF_01723 0.0 scrB 3.2.1.26 GH32 G ko:K01193 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 invertase
PDDEGFHF_01724 0.0 - - - S ko:K13730 ko05100,map05100 ko00000,ko00001 Uncharacterized protein conserved in bacteria (DUF2252)
PDDEGFHF_01725 5.73e-210 - - - K - - - LysR substrate binding domain
PDDEGFHF_01726 3.18e-211 - - - S - - - Polyphosphate nucleotide phosphotransferase, PPK2 family
PDDEGFHF_01727 5.32e-142 - - - - - - - -
PDDEGFHF_01729 1.21e-280 potE - - E - - - Amino Acid
PDDEGFHF_01730 2.17e-53 potE - - E - - - Amino Acid
PDDEGFHF_01731 3.77e-217 - - - V - - - Beta-lactamase enzyme family
PDDEGFHF_01732 4.22e-286 dacA 3.4.16.4 - M ko:K07258 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01002,ko01011 Belongs to the peptidase S11 family
PDDEGFHF_01733 1.28e-126 - - - - - - - -
PDDEGFHF_01734 1.74e-252 pgl 3.1.1.31 - G ko:K07404 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Lactonase, 7-bladed beta-propeller
PDDEGFHF_01735 2.18e-138 - - - I - - - PAP2 superfamily
PDDEGFHF_01736 5.37e-72 - - - S - - - MazG-like family
PDDEGFHF_01737 0.0 - - - L - - - Helicase C-terminal domain protein
PDDEGFHF_01738 7.66e-222 - - - L - - - Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PDDEGFHF_01739 2.38e-149 - - - K ko:K02538 - ko00000,ko03000 PRD domain
PDDEGFHF_01740 3.49e-219 deoR - - K ko:K05346 - ko00000,ko03000 sugar-binding domain protein
PDDEGFHF_01741 1.59e-213 rbsK 2.7.1.15 - H ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PDDEGFHF_01742 6.06e-89 rbsD 5.4.99.62 - G ko:K06726 ko02010,map02010 ko00000,ko00001,ko01000 Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PDDEGFHF_01743 0.0 fucP - - G ko:K02429 - ko00000,ko02000 Major Facilitator Superfamily
PDDEGFHF_01744 0.0 ptsI 2.7.3.9 - G ko:K08483 ko02060,map02060 ko00000,ko00001,ko01000,ko02000 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PDDEGFHF_01745 2.3e-186 sufC - - O ko:K09013 - ko00000,ko02000 FeS assembly ATPase SufC
PDDEGFHF_01746 1.28e-310 sufD - - O ko:K07033,ko:K09015 - ko00000 FeS assembly protein SufD
PDDEGFHF_01747 1.5e-297 sufS 2.8.1.7, 4.4.1.16 - E ko:K11717 ko00450,ko01100,map00450,map01100 ko00000,ko00001,ko01000 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PDDEGFHF_01748 1.76e-109 nifU - - C ko:K04488 - ko00000 SUF system FeS assembly protein, NifU family
PDDEGFHF_01749 0.0 sufB - - O ko:K07033,ko:K09014 - ko00000 assembly protein SufB
PDDEGFHF_01750 1.04e-245 fecB - - P ko:K02016 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Periplasmic binding protein
PDDEGFHF_01751 7.43e-08 - - - C - - - Aldo/keto reductase family
PDDEGFHF_01754 1.68e-57 - - - C - - - Aldo keto reductase
PDDEGFHF_01755 1.47e-30 - - - C - - - reductase
PDDEGFHF_01756 1.69e-99 - - - S - - - Belongs to the short-chain dehydrogenases reductases (SDR) family
PDDEGFHF_01757 9.46e-106 - 3.8.1.5 - S ko:K01563 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 Alpha/beta hydrolase family
PDDEGFHF_01758 1.84e-155 pnb - - C - - - nitroreductase
PDDEGFHF_01759 6.59e-17 crp2 - - K ko:K10914,ko:K21562 ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111 ko00000,ko00001,ko03000 helix_turn_helix, cAMP Regulatory protein
PDDEGFHF_01760 1.14e-58 yodA - - S - - - Tautomerase enzyme
PDDEGFHF_01761 7.87e-37 - - - S - - - Domain of unknown function (DUF4767)
PDDEGFHF_01764 1.27e-115 tpx 1.11.1.15 - O ko:K11065 - ko00000,ko01000 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PDDEGFHF_01765 0.0 valS 6.1.1.9 - J ko:K01873 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PDDEGFHF_01766 9.45e-317 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the folylpolyglutamate synthase family
PDDEGFHF_01767 9.81e-94 - 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 reductase
PDDEGFHF_01768 0.0 treB - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
PDDEGFHF_01769 4.94e-91 treR - - K ko:K03486 - ko00000,ko03000 UTRA
PDDEGFHF_01770 5.57e-300 treC 3.2.1.93 GH13 G ko:K01226 ko00500,map00500 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain protein
PDDEGFHF_01771 9.02e-146 - - - K ko:K21562 - ko00000,ko03000 Transcriptional regulator, Crp Fnr family
PDDEGFHF_01772 1.19e-61 - - - D - - - Di-iron-containing protein involved in the repair of iron-sulfur clusters
PDDEGFHF_01773 1.04e-45 copZ - - P - - - Heavy-metal-associated domain
PDDEGFHF_01774 0.0 - 3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54 - P ko:K01533,ko:K01534,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 E1-E2 ATPase
PDDEGFHF_01775 8.12e-106 - - - - - - - -
PDDEGFHF_01778 1.78e-64 - 3.1.21.3 - V ko:K01154 - ko00000,ko01000,ko02048 Type I restriction modification DNA specificity domain protein
PDDEGFHF_01779 3.02e-61 - - - L - - - MULE transposase domain
PDDEGFHF_01781 9.33e-96 - - - S - - - Fic/DOC family
PDDEGFHF_01782 1.85e-110 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
PDDEGFHF_01783 8.62e-138 lacA 2.3.1.18, 2.3.1.79 - S ko:K00633,ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
PDDEGFHF_01784 4.46e-255 ilvE 2.6.1.42 - E ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Branched-chain amino acid aminotransferase
PDDEGFHF_01785 6.82e-306 - - - E ko:K03758 - ko00000,ko02000 Amino acid permease
PDDEGFHF_01786 0.0 guaD 3.5.4.3 - F ko:K01487 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000 Amidohydrolase family
PDDEGFHF_01787 2.4e-277 - 3.5.1.18 - E ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 succinyl-diaminopimelate desuccinylase
PDDEGFHF_01790 4.45e-73 arsC 1.20.4.1 - T ko:K03741 - ko00000,ko01000 Low molecular weight phosphotyrosine protein phosphatase
PDDEGFHF_01791 8.72e-96 glpQ1 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 glycerophosphoryl diester phosphodiesterase
PDDEGFHF_01792 1.63e-60 yrfB - - C - - - NADH:flavin oxidoreductase / NADH oxidase family
PDDEGFHF_01793 7.35e-220 - - - L - - - Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PDDEGFHF_01794 6.26e-138 - - - L - - - Integrase
PDDEGFHF_01795 8.66e-88 - - - I - - - Alpha/beta hydrolase family
PDDEGFHF_01796 6.25e-58 citG 2.4.2.52 - H ko:K05966 ko02020,map02020 ko00000,ko00001,ko01000 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PDDEGFHF_01797 5.91e-80 citG 2.4.2.52 - H ko:K05966 ko02020,map02020 ko00000,ko00001,ko01000 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PDDEGFHF_01798 4.1e-48 citF 2.8.3.10 - H ko:K01643 ko02020,map02020 ko00000,ko00001,ko01000 Citrate (pro-3S)-lyase alpha chain
PDDEGFHF_01799 9.16e-08 - - - L - - - Phage tail tape measure protein TP901
PDDEGFHF_01800 3.66e-237 ysdE - - P - - - Citrate transporter
PDDEGFHF_01801 4.57e-189 - - - L - - - Transposase and inactivated derivatives, IS30 family
PDDEGFHF_01802 3.62e-22 ytgB - - S - - - Transglycosylase associated protein
PDDEGFHF_01803 1.09e-97 - - - L - - - PFAM Integrase catalytic region
PDDEGFHF_01805 1.32e-09 - - - L - - - PFAM Integrase catalytic region
PDDEGFHF_01807 7.11e-57 rpsO - - J ko:K02956 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PDDEGFHF_01808 2.9e-47 rpsT - - J ko:K02968 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 16S ribosomal RNA
PDDEGFHF_01809 1.63e-236 holA 2.7.7.7 - L ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III delta subunit
PDDEGFHF_01810 0.0 comEC - - S ko:K02238 - ko00000,ko00002,ko02044 Competence protein ComEC
PDDEGFHF_01811 8.66e-116 comEB 3.5.4.12 - F ko:K01493 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko02044 ComE operon protein 2
PDDEGFHF_01812 1.47e-127 comEA - - L ko:K02237 - ko00000,ko00002,ko02044 Competence protein ComEA
PDDEGFHF_01813 1.38e-252 lon - - T ko:K07177 ko02024,map02024 ko00000,ko00001,ko01002 Belongs to the peptidase S16 family
PDDEGFHF_01814 2.93e-114 coaD 2.7.7.3 - H ko:K00954 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PDDEGFHF_01815 1.27e-128 rsmD 2.1.1.171 - L ko:K08316 - ko00000,ko01000,ko03009 RNA methyltransferase, RsmD family
PDDEGFHF_01816 1.31e-63 ylbG - - S - - - Uncharacterized protein conserved in bacteria (DUF2129)
PDDEGFHF_01817 3.64e-271 ftsW - - D ko:K03588 ko04112,map04112 ko00000,ko00001,ko02000,ko03036 Belongs to the SEDS family
PDDEGFHF_01818 0.0 typA - - T ko:K06207 - ko00000 GTP-binding protein TypA
PDDEGFHF_01819 9.34e-176 suhB 3.1.3.25 - G ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 ko00000,ko00001,ko00002,ko01000 Belongs to the inositol monophosphatase superfamily
PDDEGFHF_01820 1.55e-65 yktA - - S - - - Belongs to the UPF0223 family
PDDEGFHF_01821 8.59e-133 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PDDEGFHF_01822 6.12e-98 - - - - - - - -
PDDEGFHF_01823 8.83e-43 ykzG - - S - - - Belongs to the UPF0356 family
PDDEGFHF_01824 8.46e-239 - - - I - - - Diacylglycerol kinase catalytic
PDDEGFHF_01825 2.39e-98 - - - P - - - ArsC family
PDDEGFHF_01826 3.81e-228 prs2 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PDDEGFHF_01827 0.0 recD2 3.1.11.5 - L ko:K03581 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PDDEGFHF_01828 9.37e-159 - - - S - - - repeat protein
PDDEGFHF_01829 1.29e-155 pgm6 - - G - - - phosphoglycerate mutase
PDDEGFHF_01830 1.08e-218 hdhL 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily
PDDEGFHF_01831 0.0 - - - S - - - amidohydrolase
PDDEGFHF_01832 3.43e-283 mnmA 2.8.1.13 - J ko:K00566 ko04122,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PDDEGFHF_01833 1.31e-75 XK27_04120 - - S - - - Putative amino acid metabolism
PDDEGFHF_01834 3.26e-162 mtnN 3.2.2.9 - E ko:K01243 ko00270,ko01100,ko01230,map00270,map01100,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PDDEGFHF_01836 5.21e-126 nudF 3.6.1.13 - L ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 ADP-ribose pyrophosphatase
PDDEGFHF_01837 9.99e-44 cspB - - K ko:K03704 - ko00000,ko03000 Cold shock protein
PDDEGFHF_01838 0.0 ileS 6.1.1.5 - J ko:K01870 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PDDEGFHF_01840 6.19e-143 divIVA - - D ko:K04074 - ko00000,ko03036 DivIVA domain protein
PDDEGFHF_01841 2.49e-186 ylmH - - S - - - S4 domain protein
PDDEGFHF_01842 7.27e-56 ylmG - - S ko:K02221 - ko00000,ko02044 YGGT family
PDDEGFHF_01843 4.13e-99 sepF - - D ko:K09772 - ko00000,ko03036 Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PDDEGFHF_01844 1.23e-291 ftsZ - - D ko:K03531 ko04112,map04112 ko00000,ko00001,ko02048,ko03036,ko04812 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PDDEGFHF_01845 5.68e-299 ftsA - - D ko:K03590 ko04112,map04112 ko00000,ko00001,ko03036,ko04812 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PDDEGFHF_01846 5.43e-193 divIB - - D ko:K03589 ko04112,map04112 ko00000,ko00001,ko03036 Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PDDEGFHF_01847 2.06e-259 murG 2.4.1.227 GT28 M ko:K02563 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PDDEGFHF_01848 0.0 murD 6.3.2.9 - M ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PDDEGFHF_01849 1.82e-226 mraY 2.7.8.13 - M ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PDDEGFHF_01850 0.0 pbpX - - M ko:K08724,ko:K12552,ko:K12556 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011 Penicillin-binding Protein
PDDEGFHF_01851 5.28e-31 ftsL - - D - - - Cell division protein FtsL
PDDEGFHF_01852 5.37e-221 rsmH 2.1.1.199 - J ko:K03438 - ko00000,ko01000,ko03009 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PDDEGFHF_01853 1.23e-105 mraZ - - K ko:K03925 - ko00000 Belongs to the MraZ family
PDDEGFHF_01854 9.82e-76 - - - - - - - -
PDDEGFHF_01855 4.5e-12 - - - S - - - Protein of unknown function (DUF4044)
PDDEGFHF_01856 0.0 ftsK - - D ko:K03466 - ko00000,ko03036 Belongs to the FtsK SpoIIIE SftA family
PDDEGFHF_01857 2.01e-123 cspR 2.1.1.207 - J ko:K03216 - ko00000,ko01000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PDDEGFHF_01858 7.55e-206 rrmA 2.1.1.187 - H ko:K00563,ko:K10947 - ko00000,ko01000,ko03000,ko03009 Methyltransferase
PDDEGFHF_01859 9.32e-252 pgl 3.1.1.31 - G ko:K07404 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Lactonase, 7-bladed beta-propeller
PDDEGFHF_01860 5.39e-221 yjbO 5.4.99.23 - G ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
PDDEGFHF_01861 9.49e-197 nadK 2.7.1.23 - F ko:K00858 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PDDEGFHF_01862 5.24e-159 yjbM 2.7.6.5 - S ko:K07816 ko00230,map00230 ko00000,ko00001,ko01000 RelA SpoT domain protein
PDDEGFHF_01863 1.2e-146 yjbH - - Q - - - Thioredoxin
PDDEGFHF_01864 8.05e-261 coiA - - S ko:K06198 - ko00000 Competence protein
PDDEGFHF_01865 7.24e-151 mecA - - NOT ko:K16511 - ko00000 Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PDDEGFHF_01866 1.12e-90 spxA - - K ko:K16509 - ko00000 Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PDDEGFHF_01887 2.34e-49 - - - K - - - transcriptional regulator
PDDEGFHF_01888 2.81e-212 guaC 1.7.1.7 - F ko:K00364 ko00230,map00230 ko00000,ko00001,ko01000 Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PDDEGFHF_01889 0.0 purA 6.3.4.4 - F ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PDDEGFHF_01890 0.0 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 - C ko:K00135 ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Belongs to the aldehyde dehydrogenase family
PDDEGFHF_01891 2.06e-51 - - - L - - - Probable transposase
PDDEGFHF_01892 1.02e-32 - - - EGP ko:K08166 - ko00000,ko02000 Major Facilitator Superfamily
PDDEGFHF_01893 5.19e-55 - - - EGP ko:K08166 - ko00000,ko02000 Major Facilitator Superfamily
PDDEGFHF_01894 1.53e-87 adh2 1.1.1.1 - E ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 alcohol dehydrogenase
PDDEGFHF_01895 2.07e-71 adh2 1.1.1.1 - E ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 alcohol dehydrogenase
PDDEGFHF_01896 3.14e-20 - - - C - - - Flavodoxin
PDDEGFHF_01897 2.39e-28 - - - GM - - - NmrA-like family
PDDEGFHF_01898 5.08e-14 - - - S - - - NAD(P)H dehydrogenase (quinone) activity
PDDEGFHF_01899 1.84e-23 - - - V ko:K07052 - ko00000 CAAX protease self-immunity
PDDEGFHF_01900 4.53e-127 msrA 1.8.4.11, 1.8.4.12 - O ko:K07304,ko:K12267 - ko00000,ko01000 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PDDEGFHF_01901 2.52e-203 - - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the nlpA lipoprotein family
PDDEGFHF_01902 2.41e-134 msrA 1.8.4.11, 1.8.4.12 - O ko:K07304,ko:K12267 - ko00000,ko01000 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PDDEGFHF_01903 1.55e-151 - - - S ko:K07150 - ko00000 Protein of unknown function (DUF554)
PDDEGFHF_01904 1.56e-132 cadD - - P - - - Cadmium resistance transporter
PDDEGFHF_01905 0.0 rsmF - - J - - - NOL1 NOP2 sun family protein
PDDEGFHF_01906 2.94e-195 yitU 3.1.3.104 - S ko:K21064 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 hydrolase
PDDEGFHF_01907 2.01e-108 - - - K - - - FR47-like protein
PDDEGFHF_01908 2.67e-95 tnpR - - L - - - Resolvase, N terminal domain
PDDEGFHF_01909 1.72e-213 rbsK 2.7.1.15 - H ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PDDEGFHF_01910 9.89e-207 glxR 1.1.1.31 - I ko:K00020 ko00280,ko01100,map00280,map01100 ko00000,ko00001,ko01000 Dehydrogenase
PDDEGFHF_01911 2.41e-235 fruR3 - - K ko:K02529,ko:K03484 - ko00000,ko03000 Transcriptional regulator, LacI family
PDDEGFHF_01912 7.43e-58 - - - L ko:K07497 - ko00000 hmm pf00665
PDDEGFHF_01913 3.27e-49 - 2.7.1.200 - G ko:K02774 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
PDDEGFHF_01914 9.78e-273 - - - G ko:K02775 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system sugar-specific permease component
PDDEGFHF_01915 3.29e-73 - 2.7.1.200 - GT ko:K02773 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PDDEGFHF_01917 6.12e-28 - - - K ko:K02538 - ko00000,ko03000 PRD domain
PDDEGFHF_01918 4.7e-10 - - - M - - - LPXTG-motif cell wall anchor domain protein
PDDEGFHF_01919 1.96e-91 - - - - - - - -
PDDEGFHF_01920 6.97e-204 xth 3.1.11.2 - L ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 exodeoxyribonuclease III
PDDEGFHF_01921 5.57e-103 lacR - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator
PDDEGFHF_01922 1.93e-270 lacS - - G ko:K11104,ko:K16209 - ko00000,ko02000 Transporter
PDDEGFHF_01923 1.88e-135 ahpC 1.11.1.15 - O ko:K03386 ko04214,map04214 ko00000,ko00001,ko01000,ko04147 Peroxiredoxin
PDDEGFHF_01924 0.0 - 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Thioredoxin domain
PDDEGFHF_01925 9.14e-155 - - - S ko:K07088 - ko00000 Membrane transport protein
PDDEGFHF_01926 5.57e-70 trxA - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Belongs to the thioredoxin family
PDDEGFHF_01927 0.0 - 1.8.1.7 - C ko:K00383 ko00480,ko04918,map00480,map04918 ko00000,ko00001,ko01000 pyridine nucleotide-disulfide oxidoreductase
PDDEGFHF_01928 5e-71 pgi 5.3.1.9 - G ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GPI family
PDDEGFHF_01930 1.74e-111 - - - K - - - GNAT family
PDDEGFHF_01931 1.27e-158 XK27_08875 - - O - - - PFAM peptidase M10A and M12B, matrixin and adamalysin
PDDEGFHF_01932 9.18e-206 yvgN - - S - - - Aldo keto reductase
PDDEGFHF_01933 5.46e-186 tpiA 5.3.1.1 - G ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PDDEGFHF_01934 5.68e-168 budA 4.1.1.5 - H ko:K01575 ko00650,ko00660,map00650,map00660 ko00000,ko00001,ko01000 Belongs to the alpha-acetolactate decarboxylase family
PDDEGFHF_01936 1.55e-74 - - - - - - - -
PDDEGFHF_01938 3.24e-10 - - - - - - - -
PDDEGFHF_01939 1.02e-102 - - - K - - - Winged helix-turn-helix DNA-binding
PDDEGFHF_01940 0.0 ycfI - - V ko:K06147 - ko00000,ko02000 ABC transporter, ATP-binding protein
PDDEGFHF_01941 0.0 yfiC - - V ko:K06147 - ko00000,ko02000 ABC transporter
PDDEGFHF_01942 1.31e-245 ampC - - V - - - Beta-lactamase
PDDEGFHF_01943 0.0 cls - - I ko:K06131 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PDDEGFHF_01944 2.31e-63 - - - - - - - -
PDDEGFHF_01945 4.33e-180 - - - S ko:K07009 - ko00000 CobB/CobQ-like glutamine amidotransferase domain
PDDEGFHF_01946 0.0 murE2 6.3.2.13 - M ko:K01928 ko00300,ko00550,map00300,map00550 ko00000,ko00001,ko01000,ko01011 Domain of unknown function (DUF1727)
PDDEGFHF_01947 1.78e-139 tdk 2.7.1.21 - F ko:K00857 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 thymidine kinase
PDDEGFHF_01948 5.36e-208 prfA - - J ko:K02835 - ko00000,ko03012 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PDDEGFHF_01949 1.35e-203 prmC 2.1.1.297 - J ko:K02493 - ko00000,ko01000,ko03012 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PDDEGFHF_01950 2.77e-249 ywlC 2.7.7.87 - J ko:K07566 - ko00000,ko01000,ko03009,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PDDEGFHF_01951 9e-294 glyA 2.1.2.1 - E ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PDDEGFHF_01952 3.86e-149 upp 2.4.2.9 - F ko:K00761 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PDDEGFHF_01953 2e-252 yibE - - S - - - overlaps another CDS with the same product name
PDDEGFHF_01954 1.58e-164 yibF - - S - - - overlaps another CDS with the same product name
PDDEGFHF_01955 1.1e-295 pyrP - - F ko:K02824 - ko00000,ko02000 Permease
PDDEGFHF_01956 5.66e-168 atpB - - C ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko03110 it plays a direct role in the translocation of protons across the membrane
PDDEGFHF_01957 2.13e-27 atpE - - C ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDDEGFHF_01958 5.83e-82 atpF - - C ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PDDEGFHF_01959 1.23e-119 atpH - - C ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDDEGFHF_01960 0.0 atpA 3.6.3.14 - C ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PDDEGFHF_01961 1.78e-213 atpG - - C ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PDDEGFHF_01962 0.0 atpD 3.6.3.14 - C ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PDDEGFHF_01963 1.19e-88 atpC - - C ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane
PDDEGFHF_01964 8.07e-40 - - - S - - - Protein of unknown function (DUF1146)
PDDEGFHF_01965 5.9e-279 - - - M - - - EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
PDDEGFHF_01966 9.42e-234 mbl - - D ko:K03569 - ko00000,ko02048,ko03036,ko04812 Cell shape determining protein MreB Mrl
PDDEGFHF_01967 7.67e-43 - - - S - - - Protein of unknown function (DUF2969)
PDDEGFHF_01968 5.09e-283 rodA - - D ko:K05837 - ko00000,ko03036 Belongs to the SEDS family
PDDEGFHF_01970 6.63e-232 - - - S - - - Protein of unknown function (DUF2785)
PDDEGFHF_01971 5.85e-275 ddl 6.3.2.4 - F ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Belongs to the D-alanine--D-alanine ligase family
PDDEGFHF_01972 6.93e-195 - - - K - - - Helix-turn-helix XRE-family like proteins
PDDEGFHF_01973 6.08e-107 uspA - - T - - - universal stress protein
PDDEGFHF_01975 4.34e-299 rarA - - L ko:K07478 - ko00000 recombination factor protein RarA
PDDEGFHF_01976 8.04e-111 XK27_05190 - - S - - - Protein of unknown function (DUF1694)
PDDEGFHF_01977 1.52e-98 - 4.4.1.5 - E ko:K01759 ko00620,map00620 ko00000,ko00001,ko01000 Glyoxalase
PDDEGFHF_01978 2.3e-173 - - - S - - - Membrane
PDDEGFHF_01979 3.01e-190 - - - S - - - Uncharacterised 5xTM membrane BCR, YitT family COG1284
PDDEGFHF_01980 8.61e-35 - - - S - - - YjcQ protein
PDDEGFHF_01982 1.03e-139 rpsD - - J ko:K02986 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PDDEGFHF_01983 0.0 ezrA - - D ko:K06286 - ko00000,ko03036 modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PDDEGFHF_01984 1.43e-273 iscS2 2.8.1.7 - E ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Aminotransferase class V
PDDEGFHF_01985 8.28e-292 thiI 2.8.1.4 - H ko:K03151 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PDDEGFHF_01986 3.95e-278 yojA - - EG ko:K03299 - ko00000,ko02000 GntP family permease
PDDEGFHF_01987 1.57e-260 glxK 2.7.1.165 - G ko:K00865 ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130 ko00000,ko00001,ko01000 Belongs to the glycerate kinase type-1 family
PDDEGFHF_01988 2.75e-42 maa 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Hexapeptide repeat of succinyl-transferase
PDDEGFHF_01989 4.27e-154 - - - J - - - 2'-5' RNA ligase superfamily
PDDEGFHF_01990 4.84e-170 XK27_07210 - - S - - - B3 4 domain
PDDEGFHF_01991 7.92e-247 adhP 1.1.1.1 - C ko:K00001,ko:K13953 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 alcohol dehydrogenase
PDDEGFHF_01992 3.02e-61 - - - L - - - MULE transposase domain
PDDEGFHF_01993 2.43e-12 - - - L - - - Resolvase, N terminal domain
PDDEGFHF_01994 7.85e-88 tnpR1 - - L - - - Resolvase, N terminal domain
PDDEGFHF_01995 2.66e-66 - - - S - - - Protein of unknown function (DUF975)
PDDEGFHF_01996 8.35e-05 ligA 6.5.1.2 - L ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 ko00000,ko00001,ko01000,ko03032,ko03400 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PDDEGFHF_01997 2.47e-139 - - - L ko:K07497 - ko00000 hmm pf00665
PDDEGFHF_01998 3.02e-61 - - - L - - - MULE transposase domain
PDDEGFHF_01999 0.0 cadA - - P - - - P-type ATPase
PDDEGFHF_02000 1.03e-146 - - - L ko:K07497 - ko00000 transposition
PDDEGFHF_02001 8.34e-101 - - - - - - - -
PDDEGFHF_02002 2.43e-98 - - - S - - - Short repeat of unknown function (DUF308)
PDDEGFHF_02003 9.36e-110 galR - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator
PDDEGFHF_02004 1.68e-107 - - - U ko:K05340 - ko00000,ko02000 sugar transport
PDDEGFHF_02005 4.38e-77 - - - L ko:K07497 - ko00000 hmm pf00665
PDDEGFHF_02006 4.2e-78 - - - L - - - Helix-turn-helix domain
PDDEGFHF_02007 4.74e-23 - - - - - - - -
PDDEGFHF_02008 1.19e-41 - - - S - - - Transglycosylase associated protein
PDDEGFHF_02009 3.37e-96 asp1 - - S - - - Asp23 family, cell envelope-related function
PDDEGFHF_02010 2.24e-113 - - - - - - - -
PDDEGFHF_02011 2e-287 - 3.6.3.3, 3.6.3.5 - P ko:K01534 - ko00000,ko01000 P-type ATPase
PDDEGFHF_02012 2.69e-93 - - - S - - - Domain of unknown function (DUF4432)
PDDEGFHF_02013 1.02e-126 deoC 4.1.2.4 - F ko:K01619 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PDDEGFHF_02014 0.0 - - - S - - - Protein of unknown function DUF262
PDDEGFHF_02015 0.0 - 3.4.21.53 - O ko:K01338 ko04112,map04112 ko00000,ko00001,ko01000,ko01002 Putative ATP-dependent Lon protease
PDDEGFHF_02016 0.0 - - - S - - - PglZ domain
PDDEGFHF_02017 0.0 - - - V - - - Eco57I restriction-modification methylase
PDDEGFHF_02018 2.2e-245 - - - L - - - Belongs to the 'phage' integrase family
PDDEGFHF_02019 0.0 - - - V - - - Eco57I restriction-modification methylase
PDDEGFHF_02020 0.0 - - - K - - - RNA-binding protein homologous to eukaryotic snRNP
PDDEGFHF_02021 9.58e-132 - - - S - - - Domain of unknown function (DUF1788)
PDDEGFHF_02022 2.73e-68 - - - S - - - Putative inner membrane protein (DUF1819)
PDDEGFHF_02023 6.54e-251 int2 - - L - - - Belongs to the 'phage' integrase family
PDDEGFHF_02024 2.47e-112 - - - K - - - Helix-turn-helix XRE-family like proteins
PDDEGFHF_02025 6.95e-11 - - - S - - - Helix-turn-helix domain
PDDEGFHF_02028 1.75e-190 - - - L - - - DNA replication protein
PDDEGFHF_02029 8.38e-121 - - - S ko:K06919 - ko00000 D5 N terminal like
PDDEGFHF_02035 7.15e-82 - - - - - - - -
PDDEGFHF_02037 1.22e-23 - - - S - - - zinc-ribbon domain
PDDEGFHF_02041 2.96e-132 clpP 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PDDEGFHF_02042 7.02e-22 - 3.5.99.2 - K ko:K03707 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03000 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
PDDEGFHF_02043 3.6e-99 - 3.5.99.2 - K ko:K03707 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03000 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
PDDEGFHF_02044 6.71e-214 whiA - - K ko:K09762 - ko00000 May be required for sporulation
PDDEGFHF_02045 2e-240 yvcK - - S - - - Required for morphogenesis under gluconeogenic growth conditions
PDDEGFHF_02046 7.83e-206 yvcJ - - S ko:K06958 - ko00000,ko03019 Displays ATPase and GTPase activities
PDDEGFHF_02047 5.07e-261 - - - - - - - -
PDDEGFHF_02048 0.0 uvrA - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PDDEGFHF_02049 0.0 uvrB - - L ko:K03702 ko03420,map03420 ko00000,ko00001,ko03400 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PDDEGFHF_02051 1.02e-144 yfbR - - S ko:K07023 - ko00000 HD containing hydrolase-like enzyme
PDDEGFHF_02052 0.0 pgm 5.4.2.2 - G ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PDDEGFHF_02053 1.66e-24 pgm 5.4.2.2 - G ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PDDEGFHF_02054 1.2e-175 - - - S - - - haloacid dehalogenase-like hydrolase
PDDEGFHF_02055 9.22e-217 hdhL 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily
PDDEGFHF_02056 2.39e-254 ilvE 2.6.1.42 - E ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Branched-chain amino acid aminotransferase
PDDEGFHF_02057 2.09e-215 cysK 2.5.1.47 - E ko:K01738 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the cysteine synthase cystathionine beta- synthase family
PDDEGFHF_02058 5.7e-199 metA 2.3.1.46 - E ko:K00651 ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Transfers an acetyl group from acetyl-CoA to
PDDEGFHF_02059 4.74e-166 trxB 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PDDEGFHF_02060 2.2e-211 ykoT - - M - - - Glycosyl transferase family 2
PDDEGFHF_02061 3.98e-47 - - - L - - - PFAM transposase, IS4 family protein
PDDEGFHF_02062 1.99e-28 - - - - - - - -
PDDEGFHF_02063 4.39e-133 pinR1 - - L - - - Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
PDDEGFHF_02064 9.66e-15 - - - L - - - PFAM Integrase catalytic region
PDDEGFHF_02065 2.11e-219 - - - L - - - Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PDDEGFHF_02067 9.6e-70 - - - L - - - Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PDDEGFHF_02068 1.39e-232 - 1.1.1.26 - CH ko:K00015 ko00630,ko01100,ko01110,ko01120,map00630,map01100,map01110,map01120 ko00000,ko00001,ko01000 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDDEGFHF_02069 2.21e-114 - - - L ko:K07497 - ko00000 hmm pf00665
PDDEGFHF_02070 8.54e-63 - - - L - - - Helix-turn-helix domain
PDDEGFHF_02071 8.92e-160 - - - L - - - PFAM transposase, IS4 family protein

eggNOG-mapper v2.1.12 (Database: eggNOG v5.0.2, Mar. 2021 release)