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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
PDAMAKEP_00001	1.27e-10	-	-	-	L	-	-	-	Transposase
PDAMAKEP_00002	1.42e-46	-	-	-	L	-	-	-	Transposase
PDAMAKEP_00003	8.91e-172	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PDAMAKEP_00004	1.27e-79	-	-	-	S	-	-	-	CAAX protease self-immunity
PDAMAKEP_00005	2.48e-107	-	-	-	E	-	-	-	phosphoribosylanthranilate isomerase activity
PDAMAKEP_00006	3.21e-305	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PDAMAKEP_00007	5.17e-287	xynP	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
PDAMAKEP_00008	1.84e-26	xynP	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
PDAMAKEP_00009	6.78e-36	xynB	3.2.1.37	GH43	G	ko:K01198	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
PDAMAKEP_00010	1.59e-65	-	-	-	L	-	-	-	Transposase
PDAMAKEP_00011	3.17e-176	-	-	-	L	ko:K07497	-	ko00000	COG2801 Transposase and inactivated derivatives
PDAMAKEP_00012	0.0	xynB	3.2.1.37	GH43	G	ko:K01198	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
PDAMAKEP_00013	8.3e-274	xylR	-	-	GK	-	-	-	ROK family
PDAMAKEP_00014	0.0	xylA	5.3.1.5	-	G	ko:K01805	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko01000	Belongs to the xylose isomerase family
PDAMAKEP_00015	4.97e-07	xylB	2.7.1.17	-	G	ko:K00854	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Xylulose kinase
PDAMAKEP_00016	0.0	xylB	2.7.1.17	-	G	ko:K00854	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	xylulose kinase
PDAMAKEP_00017	3.26e-72	-	-	-	L	-	-	-	transposase activity
PDAMAKEP_00018	2.88e-186	-	-	-	L	ko:K07497	-	ko00000	Molecular Function DNA binding, Biological Process DNA recombination
PDAMAKEP_00019	7.18e-145	yokF	3.1.31.1	-	L	ko:K01174	-	ko00000,ko01000	RNA catabolic process
PDAMAKEP_00020	0.0	-	-	-	U	ko:K02100,ko:K06609,ko:K08139	ko04113,map04113	ko00000,ko00001,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PDAMAKEP_00021	1.05e-276	alr	5.1.1.1	-	E	ko:K01775	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PDAMAKEP_00022	1.15e-108	-	-	-	S	-	-	-	Protein of unknown function (DUF2691)
PDAMAKEP_00023	2.13e-58	yncF	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Deoxyuridine 5'-triphosphate
PDAMAKEP_00024	1.45e-11	yncF	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Deoxyuridine 5'-triphosphate
PDAMAKEP_00025	1.59e-65	-	-	-	L	-	-	-	Transposase
PDAMAKEP_00026	3.17e-176	-	-	-	L	ko:K07497	-	ko00000	COG2801 Transposase and inactivated derivatives
PDAMAKEP_00027	5.92e-08	-	-	-	-	-	-	-	-
PDAMAKEP_00028	3.21e-305	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PDAMAKEP_00031	1.59e-209	-	-	-	S	-	-	-	Thymidylate synthase
PDAMAKEP_00032	8.27e-40	-	-	-	-	-	-	-	-
PDAMAKEP_00034	9.38e-162	-	-	-	S	-	-	-	Domain of unknown function, YrpD
PDAMAKEP_00037	2.37e-34	tatA	-	-	U	ko:K03116,ko:K03117,ko:K03646	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02000,ko02044	protein secretion
PDAMAKEP_00038	2.59e-70	-	-	-	-	-	-	-	-
PDAMAKEP_00039	1.81e-103	yndB	-	-	S	-	-	-	Activator of Hsp90 ATPase homolog 1-like protein
PDAMAKEP_00042	0.0	yndD1	-	-	EG	ko:K06288,ko:K06291,ko:K06310	-	ko00000	Spore germination protein
PDAMAKEP_00043	2.18e-247	yndE7	-	-	U	ko:K06311	-	ko00000,ko02000	Spore germination
PDAMAKEP_00044	6.51e-241	-	-	-	S	ko:K06293,ko:K06312	-	ko00000	Spore germination protein
PDAMAKEP_00045	5.29e-198	yndG	-	-	S	-	-	-	DoxX-like family
PDAMAKEP_00046	2.36e-146	-	-	-	S	-	-	-	Domain of unknown function (DUF4166)
PDAMAKEP_00047	0.0	yndJ	-	-	S	-	-	-	YndJ-like protein
PDAMAKEP_00049	5.4e-174	yndL	-	-	S	-	-	-	Replication protein
PDAMAKEP_00050	1.54e-95	yndM	-	-	S	-	-	-	Protein of unknown function (DUF2512)
PDAMAKEP_00051	1.22e-101	fosB	-	-	H	ko:K11210,ko:K21252	-	ko00000,ko01000,ko01504	Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor
PDAMAKEP_00052	7.22e-142	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PDAMAKEP_00053	8.5e-65	yneA	-	-	D	-	-	-	Inhibits cell division during the SOS response. Affects a later stage of the cell division protein assembly, after the assembly of the Z ring, by probably suppressing recruitment of FtsL and or DivIC to the division machinery
PDAMAKEP_00054	2.68e-143	yneB	-	-	L	-	-	-	resolvase
PDAMAKEP_00055	8.14e-42	ynzC	-	-	S	-	-	-	UPF0291 protein
PDAMAKEP_00056	0.0	tkt	2.2.1.1	-	G	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PDAMAKEP_00057	2.18e-106	yneE	-	-	S	-	-	-	Sporulation inhibitor of replication protein sirA
PDAMAKEP_00058	4.36e-39	yneF	-	-	S	ko:K09976	-	ko00000	UPF0154 protein
PDAMAKEP_00059	4.59e-21	ynzD	-	-	S	-	-	-	Spo0E like sporulation regulatory protein
PDAMAKEP_00060	8.34e-165	ccdA	-	-	O	ko:K06196	-	ko00000,ko02000	cytochrome c biogenesis protein
PDAMAKEP_00061	7.38e-78	ccdB	-	-	T	ko:K03413	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko02022,ko02035	cheY-homologous receiver domain
PDAMAKEP_00062	2.51e-98	yneJ	-	-	O	-	-	-	COG4846 Membrane protein involved in cytochrome C biogenesis
PDAMAKEP_00063	3.26e-72	-	-	-	L	-	-	-	transposase activity
PDAMAKEP_00064	2.88e-186	-	-	-	L	ko:K07497	-	ko00000	Molecular Function DNA binding, Biological Process DNA recombination
PDAMAKEP_00065	3.97e-97	yneK	-	-	S	-	-	-	Protein of unknown function (DUF2621)
PDAMAKEP_00066	1.21e-86	cotM	-	-	O	ko:K06335	-	ko00000	Spore coat protein
PDAMAKEP_00067	5.65e-27	sspP	-	-	S	ko:K06433	-	ko00000	Belongs to the SspP family
PDAMAKEP_00068	3.75e-21	sspO	-	-	S	ko:K06432	-	ko00000	Belongs to the SspO family
PDAMAKEP_00069	0.0	citB	4.2.1.3	-	C	ko:K01681	ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
PDAMAKEP_00070	3.74e-120	yneN	-	-	CO	-	-	-	alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
PDAMAKEP_00071	9.26e-10	-	-	-	S	-	-	-	Fur-regulated basic protein B
PDAMAKEP_00073	1.9e-47	tlp	-	-	S	ko:K06434	-	ko00000	Belongs to the Tlp family
PDAMAKEP_00074	1.4e-95	yneP	-	-	S	ko:K07107	-	ko00000,ko01000	Thioesterase-like superfamily
PDAMAKEP_00075	4.68e-71	yneQ	-	-	-	-	-	-	-
PDAMAKEP_00076	8.97e-65	yneR	-	-	S	-	-	-	Belongs to the HesB IscA family
PDAMAKEP_00077	5.48e-122	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PDAMAKEP_00078	1.21e-90	yneT	-	-	S	ko:K06929	-	ko00000	CoA-binding protein
PDAMAKEP_00079	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PDAMAKEP_00080	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PDAMAKEP_00081	1.82e-18	-	-	-	-	-	-	-	-
PDAMAKEP_00082	8.74e-75	ynfC	-	-	-	-	-	-	-
PDAMAKEP_00083	2.06e-315	alsT	-	-	E	ko:K03310,ko:K11626	ko02020,map02020	ko00000,ko00001	Sodium alanine symporter
PDAMAKEP_00084	2.07e-276	bglC5	3.2.1.4	GH5,GH9	G	ko:K01179	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	PFAM glycoside hydrolase family 5
PDAMAKEP_00085	2.22e-53	bglC5	3.2.1.4	GH5,GH9	G	ko:K01179	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	PFAM glycoside hydrolase family 5
PDAMAKEP_00087	2.12e-114	ynfF	3.2.1.136	GH5	M	ko:K15924	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 30 family
PDAMAKEP_00088	2.08e-171	ynfF	3.2.1.136	GH5	M	ko:K15924	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 30 family
PDAMAKEP_00089	0.0	xynD	3.2.1.55	CBM6,GH43	G	ko:K15921	ko00520,map00520	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
PDAMAKEP_00090	1.04e-98	yngA	-	-	S	-	-	-	membrane
PDAMAKEP_00091	2.74e-210	yngB	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
PDAMAKEP_00092	2.01e-134	yngC	-	-	S	-	-	-	membrane-associated protein
PDAMAKEP_00093	4.99e-294	yngD	-	-	S	ko:K07097	-	ko00000	phosphohydrolase (DHH superfamily)
PDAMAKEP_00094	0.0	yngE	-	-	I	-	-	-	COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
PDAMAKEP_00095	8.22e-173	yngF	-	-	I	-	-	-	Belongs to the enoyl-CoA hydratase isomerase family
PDAMAKEP_00096	1.36e-211	yngG	4.1.3.4	-	E	ko:K01640	ko00072,ko00280,ko00281,ko00650,ko01100,ko04146,map00072,map00280,map00281,map00650,map01100,map04146	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA lyase
PDAMAKEP_00097	1.98e-40	-	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	Biotin carboxyl carrier protein
PDAMAKEP_00098	0.0	yngH	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Biotin carboxylase
PDAMAKEP_00099	0.0	yngI	-	-	IQ	ko:K00666	-	ko00000,ko01000,ko01004	COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
PDAMAKEP_00100	7.28e-266	yngJ	1.3.8.1	-	I	ko:K00248	ko00071,ko00280,ko00650,ko01100,ko01110,ko01120,ko01200,ko01212,map00071,map00280,map00650,map01100,map01110,map01120,map01200,map01212	ko00000,ko00001,ko01000	acyl-CoA dehydrogenase
PDAMAKEP_00101	0.0	yngK	-	-	T	-	-	-	Glycosyl hydrolase-like 10
PDAMAKEP_00102	2.12e-84	yngL	-	-	S	-	-	-	Protein of unknown function (DUF1360)
PDAMAKEP_00103	8.57e-267	-	6.3.2.14	-	Q	ko:K02364,ko:K15656,ko:K15668	ko01053,ko01054,ko01110,ko01130,ko02024,map01053,map01054,map01110,map01130,map02024	ko00000,ko00001,ko01000,ko01008	amino acid activation for nonribosomal peptide biosynthetic process
PDAMAKEP_00104	3.06e-185	-	6.3.2.14	-	Q	ko:K02364,ko:K15656,ko:K15668	ko01053,ko01054,ko01110,ko01130,ko02024,map01053,map01054,map01110,map01130,map02024	ko00000,ko00001,ko01000,ko01008	amino acid activation for nonribosomal peptide biosynthetic process
PDAMAKEP_00105	2.19e-143	-	6.3.2.14	-	Q	ko:K02364,ko:K15656,ko:K15668	ko01053,ko01054,ko01110,ko01130,ko02024,map01053,map01054,map01110,map01130,map02024	ko00000,ko00001,ko01000,ko01008	amino acid activation for nonribosomal peptide biosynthetic process
PDAMAKEP_00106	1.17e-147	-	6.3.2.14	-	Q	ko:K02364,ko:K15656,ko:K15668	ko01053,ko01054,ko01110,ko01130,ko02024,map01053,map01054,map01110,map01130,map02024	ko00000,ko00001,ko01000,ko01008	amino acid activation for nonribosomal peptide biosynthetic process
PDAMAKEP_00107	0.0	-	-	-	Q	ko:K15664,ko:K15666,ko:K15667	ko01054,map01054	ko00000,ko00001,ko01008	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PDAMAKEP_00108	0.0	dacC	3.4.16.4	-	M	ko:K07259	ko00550,map00550	ko00000,ko00001,ko01000,ko01002,ko01011	D-alanyl-D-alanine carboxypeptidase
PDAMAKEP_00109	1.11e-239	yoxA	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
PDAMAKEP_00110	9.8e-313	yoeA	-	-	V	-	-	-	MATE efflux family protein
PDAMAKEP_00111	7.14e-128	yoeB	-	-	S	-	-	-	IseA DL-endopeptidase inhibitor
PDAMAKEP_00113	1.14e-124	-	-	-	L	-	-	-	Integrase
PDAMAKEP_00114	1.92e-46	yoeD	-	-	G	-	-	-	Helix-turn-helix domain
PDAMAKEP_00115	0.0	ggt	2.3.2.2, 3.4.19.13	-	E	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	ko00000,ko00001,ko01000,ko01002	gamma-glutamyltransferase
PDAMAKEP_00116	3.42e-198	gltR1	-	-	K	ko:K21959	-	ko00000,ko03000	Transcriptional regulator
PDAMAKEP_00117	1.15e-234	yogA	-	-	C	ko:K13955	-	ko00000	COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases
PDAMAKEP_00118	0.0	gltD	1.4.1.13, 1.4.1.14	-	E	ko:K00266	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases
PDAMAKEP_00119	0.0	gltA	1.4.1.13, 1.4.1.14, 1.4.7.1	-	E	ko:K00265,ko:K00284	ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	glutamate synthase
PDAMAKEP_00120	2.61e-205	gltC	-	-	K	ko:K09681	-	ko00000,ko03000	Transcriptional regulator
PDAMAKEP_00121	3.86e-261	proB	2.7.2.11	-	E	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PDAMAKEP_00122	3.18e-184	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PDAMAKEP_00123	5.37e-79	rtp	-	-	K	-	-	-	Plays a role in DNA replication and termination (fork arrest mechanism). Two dimers of rtp bind to the two inverted repeat regions (IRI and IRII) present in the termination site. The binding of each dimer is centered on an 8 bp direct repeat
PDAMAKEP_00124	3.77e-158	fabG	1.1.1.100	-	S	ko:K00059,ko:K07124	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the short-chain dehydrogenases reductases (SDR) family
PDAMAKEP_00125	8.07e-53	yoxC	-	-	S	-	-	-	Bacterial protein of unknown function (DUF948)
PDAMAKEP_00126	9.35e-160	yoxB	-	-	-	-	-	-	-
PDAMAKEP_00127	1.56e-120	yoaA	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
PDAMAKEP_00128	1.11e-300	yoaB	-	-	EGP	-	-	-	the major facilitator superfamily
PDAMAKEP_00129	9.2e-135	lsrK	2.7.1.189	-	G	ko:K11216	ko02024,map02024	ko00000,ko00001,ko01000	FGGY family of carbohydrate kinases, C-terminal domain
PDAMAKEP_00130	1.46e-142	lsrK	2.7.1.189	-	G	ko:K11216	ko02024,map02024	ko00000,ko00001,ko01000	FGGY family of carbohydrate kinases, C-terminal domain
PDAMAKEP_00131	5.81e-235	yoaD	1.1.1.399, 1.1.1.95	-	EH	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDAMAKEP_00132	0.0	yoaE	-	-	C	-	-	-	belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PDAMAKEP_00133	1.76e-32	yoaF	-	-	-	-	-	-	-
PDAMAKEP_00134	1.71e-287	yoaH	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	methyl-accepting chemotaxis protein
PDAMAKEP_00135	0.0	yoaI	1.14.14.9	-	Q	ko:K00483	ko00350,ko01120,ko01220,map00350,map01120,map01220	ko00000,ko00001,ko01000	COG2368 Aromatic ring hydroxylase
PDAMAKEP_00136	4.33e-170	yoaJ	-	-	G	ko:K20628	-	ko00000	Endoglucanase C-terminal domain subunit and related proteins
PDAMAKEP_00137	1.79e-145	yoaK	-	-	S	-	-	-	Membrane
PDAMAKEP_00138	1.16e-117	-	4.2.2.10	-	G	ko:K01732	-	ko00000,ko01000	Amb_all
PDAMAKEP_00139	2.28e-127	yoqW	-	-	S	-	-	-	Belongs to the SOS response-associated peptidase family
PDAMAKEP_00142	2.02e-95	oxdD	4.1.1.2	-	G	ko:K01569	ko00630,ko01100,map00630,map01100	ko00000,ko00001,ko01000	Oxalate decarboxylase
PDAMAKEP_00143	1.86e-178	oxdD	4.1.1.2	-	G	ko:K01569	ko00630,ko01100,map00630,map01100	ko00000,ko00001,ko01000	Oxalate decarboxylase
PDAMAKEP_00146	2.35e-48	-	-	-	-	-	-	-	-
PDAMAKEP_00147	4.75e-214	yoaR	-	-	V	-	-	-	vancomycin resistance protein
PDAMAKEP_00148	9.68e-90	yoaS	-	-	S	-	-	-	Protein of unknown function (DUF2975)
PDAMAKEP_00149	7.19e-41	yozG	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
PDAMAKEP_00150	3.21e-305	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PDAMAKEP_00151	1.28e-98	yoaW	-	-	-	-	-	-	-
PDAMAKEP_00152	2.24e-135	lin0465	-	-	S	-	-	-	DJ-1/PfpI family
PDAMAKEP_00153	2.21e-104	yokK	-	-	S	-	-	-	SMI1 / KNR4 family
PDAMAKEP_00154	9.26e-123	-	-	-	S	ko:K21490	-	ko00000,ko02048	SMI1 / KNR4 family (SUKH-1)
PDAMAKEP_00155	0.0	-	-	-	UW	ko:K21487,ko:K21489,ko:K21491,ko:K21493	-	ko00000,ko01000,ko02048	nuclease activity
PDAMAKEP_00156	5.65e-132	yokH	-	-	G	-	-	-	SMI1 / KNR4 family
PDAMAKEP_00157	0.0	iaaM	1.4.3.4	-	E	ko:K00274	ko00260,ko00330,ko00340,ko00350,ko00360,ko00380,ko00950,ko00982,ko01100,ko01110,ko04726,ko04728,ko05030,ko05031,ko05034,map00260,map00330,map00340,map00350,map00360,map00380,map00950,map00982,map01100,map01110,map04726,map04728,map05030,map05031,map05034	ko00000,ko00001,ko00002,ko01000	COG1231 Monoamine oxidase
PDAMAKEP_00158	3.89e-248	yobO	-	-	M	-	-	-	Pectate lyase superfamily protein
PDAMAKEP_00159	9.31e-277	yobO	-	-	M	-	-	-	Pectate lyase superfamily protein
PDAMAKEP_00160	5.01e-69	csaA	-	-	J	ko:K06878	-	ko00000	tRNA-binding protein
PDAMAKEP_00161	5.86e-172	yobQ	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PDAMAKEP_00162	5.67e-178	-	-	-	J	-	-	-	FR47-like protein
PDAMAKEP_00163	1.26e-126	yobS	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_00164	6.38e-168	yobT	-	-	S	-	-	-	COG0491 Zn-dependent hydrolases, including glyoxylases
PDAMAKEP_00165	4.8e-111	-	-	-	K	-	-	-	Bacterial transcription activator, effector binding domain
PDAMAKEP_00166	6.31e-224	yobV	-	-	K	-	-	-	WYL domain
PDAMAKEP_00167	1.74e-119	yobW	-	-	-	-	-	-	-
PDAMAKEP_00168	8.12e-69	czrA	-	-	K	ko:K22043	-	ko00000,ko03000	transcriptional
PDAMAKEP_00169	3.28e-157	yocA	-	-	M	-	-	-	COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
PDAMAKEP_00170	3.97e-119	yozB	-	-	S	ko:K08976	-	ko00000	membrane
PDAMAKEP_00171	4.82e-181	-	-	-	-	-	-	-	-
PDAMAKEP_00172	6.03e-119	yocC	-	-	-	-	-	-	-
PDAMAKEP_00173	7.52e-238	yocD	3.4.17.13	-	V	ko:K01297	-	ko00000,ko01000,ko01002,ko01011	peptidase S66
PDAMAKEP_00174	3.28e-257	des	1.14.19.23, 1.14.19.45	-	I	ko:K10255	ko02020,map02020	ko00000,ko00001,ko01000,ko01004	fatty acid desaturase
PDAMAKEP_00175	3.51e-252	desK	2.7.13.3	-	T	ko:K07778	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PDAMAKEP_00176	4.71e-135	desR	-	-	T	ko:K02479,ko:K07693	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PDAMAKEP_00177	2.89e-175	yocH	-	-	M	-	-	-	COG1388 FOG LysM repeat
PDAMAKEP_00178	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	DNA helicase
PDAMAKEP_00179	1.46e-147	azoR	-	-	I	ko:K01118	-	ko00000,ko01000	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PDAMAKEP_00180	1.42e-107	yocK	-	-	T	-	-	-	general stress protein
PDAMAKEP_00181	3.53e-69	yocL	-	-	-	-	-	-	-
PDAMAKEP_00182	4.77e-42	-	-	-	-	-	-	-	-
PDAMAKEP_00183	1.82e-112	yocM	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
PDAMAKEP_00184	2.94e-55	yozN	-	-	-	-	-	-	-
PDAMAKEP_00185	1.83e-49	yocN	-	-	-	-	-	-	-
PDAMAKEP_00186	2.17e-74	yozO	-	-	S	-	-	-	Bacterial PH domain
PDAMAKEP_00187	1.91e-42	yozC	-	-	-	-	-	-	-
PDAMAKEP_00188	0.0	dhaS	1.2.1.3, 1.2.1.39	-	C	ko:K00128,ko:K00146	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00360,ko00380,ko00410,ko00561,ko00620,ko00625,ko00643,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00360,map00380,map00410,map00561,map00620,map00625,map00643,map00903,map00981,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
PDAMAKEP_00189	0.0	sqhC	4.2.1.137	-	I	ko:K18115	-	ko00000,ko01000	COG1657 Squalene cyclase
PDAMAKEP_00190	3.91e-211	sodF	1.15.1.1	-	P	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	ko00000,ko00001,ko01000	Superoxide dismutase
PDAMAKEP_00191	3.57e-299	yocR	-	-	S	ko:K03308	-	ko00000	Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
PDAMAKEP_00192	1.91e-213	yocS	-	-	S	ko:K03453	-	ko00000	-transporter
PDAMAKEP_00193	2.59e-264	odhB	2.3.1.61	-	C	ko:K00658	ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2)
PDAMAKEP_00194	0.0	odhA	1.2.4.2	-	C	ko:K00164	ko00020,ko00310,ko00380,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map00380,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components 2- oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3)
PDAMAKEP_00195	0.0	yojO	-	-	P	-	-	-	Von Willebrand factor
PDAMAKEP_00196	5.42e-207	yojN	-	-	S	ko:K04748	-	ko00000	ATPase family associated with various cellular activities (AAA)
PDAMAKEP_00197	4.94e-140	sodC	1.15.1.1	-	P	ko:K04565	ko04146,ko04213,ko05014,ko05016,ko05020,map04146,map04213,map05014,map05016,map05020	ko00000,ko00001,ko01000	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
PDAMAKEP_00198	1.05e-263	-	-	CBM50	M	ko:K19220,ko:K19223,ko:K19224	-	ko00000,ko01000,ko01002,ko01011	COG1388 FOG LysM repeat
PDAMAKEP_00199	1.09e-291	yojK	-	-	CG	-	-	-	UDP-glucoronosyl and UDP-glucosyl transferase
PDAMAKEP_00200	6.12e-141	dacB	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PDAMAKEP_00202	6.59e-310	norM	-	-	V	ko:K03327	-	ko00000,ko02000	Multidrug efflux pump
PDAMAKEP_00203	8.33e-193	-	-	-	T	ko:K17763	-	ko00000,ko03021	COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PDAMAKEP_00204	1.84e-161	yojG	-	-	S	ko:K22135	-	ko00000,ko01000	deacetylase
PDAMAKEP_00205	2.32e-79	yojF	-	-	S	-	-	-	Protein of unknown function (DUF1806)
PDAMAKEP_00206	1.85e-58	-	-	-	-	-	-	-	-
PDAMAKEP_00207	5.49e-206	rarD	-	-	S	ko:K05786	-	ko00000,ko02000	-transporter
PDAMAKEP_00208	8.61e-105	yozR	-	-	S	-	-	-	COG0071 Molecular chaperone (small heat shock protein)
PDAMAKEP_00209	1.95e-14	-	-	-	-	-	-	-	-
PDAMAKEP_00210	3.09e-288	gntP	-	-	EG	ko:K03299	-	ko00000,ko02000	COG2610 H gluconate symporter and related permeases
PDAMAKEP_00211	1.33e-82	iolK	-	-	S	-	-	-	tautomerase
PDAMAKEP_00212	4.38e-72	yodB	-	-	K	-	-	-	transcriptional
PDAMAKEP_00213	1.11e-139	yodC	-	-	C	-	-	-	nitroreductase
PDAMAKEP_00214	3.26e-72	-	-	-	L	-	-	-	transposase activity
PDAMAKEP_00215	2.88e-186	-	-	-	L	ko:K07497	-	ko00000	Molecular Function DNA binding, Biological Process DNA recombination
PDAMAKEP_00216	3.61e-144	yahD	-	-	S	ko:K06999	-	ko00000	Carboxylesterase
PDAMAKEP_00217	1.18e-223	yodE	-	-	E	ko:K15975	-	ko00000	COG0346 Lactoylglutathione lyase and related lyases
PDAMAKEP_00218	2.36e-38	-	-	-	S	-	-	-	Protein of unknown function (DUF3311)
PDAMAKEP_00219	0.0	yodF	-	-	E	ko:K03307	-	ko00000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PDAMAKEP_00220	0.0	ctpA	3.4.21.102	-	M	ko:K03797	-	ko00000,ko01000,ko01002	Belongs to the peptidase S41A family
PDAMAKEP_00221	3.03e-166	yodH	-	-	Q	-	-	-	Methyltransferase
PDAMAKEP_00222	4.86e-41	yodI	-	-	-	-	-	-	-
PDAMAKEP_00223	7.71e-189	yodJ	3.4.17.14	-	M	ko:K07260	ko00550,ko01100,ko01502,ko02020,map00550,map01100,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	D-alanyl-D-alanine carboxypeptidase
PDAMAKEP_00224	1.68e-163	deoD	2.4.2.1	-	F	ko:K03784	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Purine nucleoside phosphorylase
PDAMAKEP_00225	2.08e-12	-	-	-	-	-	-	-	-
PDAMAKEP_00226	3.35e-71	yodL	-	-	S	-	-	-	YodL-like
PDAMAKEP_00227	5.26e-134	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
PDAMAKEP_00228	5.18e-34	yozD	-	-	S	-	-	-	YozD-like protein
PDAMAKEP_00230	7.44e-159	yodN	-	-	-	-	-	-	-
PDAMAKEP_00231	7.3e-50	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
PDAMAKEP_00232	3.44e-63	yokU	-	-	S	-	-	-	YokU-like protein, putative antitoxin
PDAMAKEP_00233	0.0	kamA	5.4.3.2	-	E	ko:K01843	ko00310,map00310	ko00000,ko00001,ko01000	lysine 2,3-aminomutase
PDAMAKEP_00234	1.76e-195	yodP	2.3.1.264	-	K	ko:K21935	-	ko00000,ko01000	Acetyltransferase (GNAT) family
PDAMAKEP_00235	0.0	yodQ	3.5.1.16, 3.5.1.18	-	E	ko:K01438,ko:K01439	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Acetylornithine deacetylase
PDAMAKEP_00236	2.22e-151	atoA	2.8.3.8, 2.8.3.9	-	I	ko:K01035	ko00310,ko00627,ko00640,ko00650,ko01100,ko01120,ko02020,map00310,map00627,map00640,map00650,map01100,map01120,map02020	ko00000,ko00001,ko01000	COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit
PDAMAKEP_00238	2.59e-312	yodT	-	-	H	-	-	-	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PDAMAKEP_00240	3.98e-184	yiiD	-	-	K	ko:K06323	-	ko00000	acetyltransferase
PDAMAKEP_00241	0.0	cgeD	-	-	M	ko:K06322	-	ko00000	maturation of the outermost layer of the spore
PDAMAKEP_00242	1.76e-58	cgeC	-	-	-	ko:K06321	-	ko00000	-
PDAMAKEP_00243	2.18e-83	cgeA	-	-	-	ko:K06319	-	ko00000	-
PDAMAKEP_00244	1.15e-237	cgeB	-	-	S	ko:K06320	-	ko00000	Spore maturation protein
PDAMAKEP_00245	5.44e-278	phy	3.1.3.8	-	I	ko:K01083	ko00562,map00562	ko00000,ko00001,ko01000	Myo-inositol-hexaphosphate 3-phosphohydrolase
PDAMAKEP_00246	1.66e-157	-	-	-	GM	ko:K19421	-	ko00000	Polysaccharide biosynthesis protein
PDAMAKEP_00247	7.13e-103	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
PDAMAKEP_00248	9.83e-133	msrB	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PDAMAKEP_00249	4.14e-94	ypoP	-	-	K	-	-	-	transcriptional
PDAMAKEP_00250	1.65e-288	mepA	-	-	V	-	-	-	MATE efflux family protein
PDAMAKEP_00251	1.24e-39	ypmT	-	-	S	-	-	-	Uncharacterized ympT
PDAMAKEP_00252	1.95e-128	ypmS	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_00253	1.05e-177	ypmR	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
PDAMAKEP_00254	3.23e-139	ypmQ	-	-	S	ko:K07152	-	ko00000,ko03029	protein SCO1 SenC PrrC, involved in biogenesis of respiratory and photosynthetic systems
PDAMAKEP_00255	1.28e-54	ypmP	-	-	S	-	-	-	Protein of unknown function (DUF2535)
PDAMAKEP_00256	3.64e-310	ilvA	4.3.1.19	-	E	ko:K01754	ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
PDAMAKEP_00257	1.1e-233	yplP	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_00258	8.03e-143	yplQ	-	-	S	ko:K11068	-	ko00000,ko02042	protein, Hemolysin III
PDAMAKEP_00259	1.15e-143	ypkP	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
PDAMAKEP_00260	5.55e-121	dfrA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PDAMAKEP_00261	8.91e-121	ltrC	3.1.3.27	-	I	ko:K01095	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	COG1267 Phosphatidylglycerophosphatase A and related proteins
PDAMAKEP_00262	1.36e-145	ypjP	-	-	S	-	-	-	YpjP-like protein
PDAMAKEP_00263	3.41e-184	ypiP	-	-	AJ	-	-	-	Putative SAM-dependent methyltransferase
PDAMAKEP_00264	9.69e-99	yphP	-	-	S	-	-	-	Belongs to the UPF0403 family
PDAMAKEP_00265	0.0	ilvD	4.2.1.9	-	E	ko:K01687,ko:K16786	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,ko02010,map00290,map00770,map01100,map01110,map01130,map01210,map01230,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Belongs to the IlvD Edd family
PDAMAKEP_00266	8.52e-206	ypgR	-	-	C	-	-	-	COG0694 Thioredoxin-like proteins and domains
PDAMAKEP_00267	2.52e-142	yagB	-	-	S	ko:K06950	-	ko00000	phosphohydrolase
PDAMAKEP_00268	1.89e-115	bsaA	1.11.1.9	-	O	ko:K00432	ko00480,ko00590,ko04918,map00480,map00590,map04918	ko00000,ko00001,ko01000	Belongs to the glutathione peroxidase family
PDAMAKEP_00269	1.49e-225	metAA	2.3.1.46	-	E	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PDAMAKEP_00270	3.02e-275	ugtP	2.4.1.315	GT28	M	ko:K03429	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Processive glucosyltransferase involved in the biosynthesis of both the bilayer- and non-bilayer-forming membrane glucolipids. Is able to successively transfer up to three glucosyl residues to diacylglycerol (DAG), thereby catalyzing the formation of beta-monoglucosyl-DAG (3-O-(beta-D-glucopyranosyl)-1,2-diacyl- sn-glycerol), beta-diglucosyl-DAG (3-O-(beta-D-glucopyranosyl- beta-(1- 6)-D-glucopyranosyl)-1,2-diacyl-sn-glycerol) and beta- triglucosyl-DAG (3-O-(beta-D-glucopyranosyl-beta-(1- 6)-D- glucopyranosyl-beta-(1- 6)-D-glucopyranosyl)-1,2-diacyl-sn- glycerol). Beta-diglucosyl-DAG is the predominant glycolipid found in Bacillales and is also used as a membrane anchor for lipoteichoic acid (LTA)
PDAMAKEP_00271	5.12e-42	cspD	-	-	K	ko:K03704	-	ko00000,ko03000	Cold-shock protein
PDAMAKEP_00272	1.17e-22	degR	-	-	-	-	-	-	-
PDAMAKEP_00273	1.05e-40	-	-	-	S	-	-	-	Protein of unknown function (DUF2564)
PDAMAKEP_00274	7.99e-41	ypeQ	-	-	S	-	-	-	Zinc-finger
PDAMAKEP_00275	4.67e-162	ypeP	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	COG0328 Ribonuclease HI
PDAMAKEP_00276	4.64e-136	ypdP	-	-	S	ko:K09125	-	ko00000	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
PDAMAKEP_00277	6.28e-87	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Ribonuclease
PDAMAKEP_00278	5.23e-05	-	-	-	-	ko:K06429	-	ko00000	-
PDAMAKEP_00279	2.26e-213	ypcP	-	-	L	-	-	-	5'3' exonuclease
PDAMAKEP_00280	7.57e-12	-	-	-	-	-	-	-	-
PDAMAKEP_00281	2e-44	ypbS	-	-	S	-	-	-	Protein of unknown function (DUF2533)
PDAMAKEP_00282	0.0	ypbR	-	-	S	-	-	-	Dynamin family
PDAMAKEP_00283	0.0	ypbR	-	-	S	-	-	-	Dynamin family
PDAMAKEP_00284	3.33e-113	ypbQ	-	-	S	ko:K16168	-	ko00000,ko01008	protein conserved in bacteria
PDAMAKEP_00285	1.4e-260	bcsA	-	-	Q	ko:K16167	-	ko00000,ko01008	Naringenin-chalcone synthase
PDAMAKEP_00286	1e-290	pbuX	-	-	F	ko:K03458,ko:K16169,ko:K16170	-	ko00000,ko02000	xanthine
PDAMAKEP_00287	2.34e-128	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PDAMAKEP_00288	0.0	ypwA	3.4.17.19	-	E	ko:K01299	-	ko00000,ko01000,ko01002	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
PDAMAKEP_00289	5.8e-224	kdgT	-	-	P	ko:K02526	-	ko00000,ko02000	The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system
PDAMAKEP_00290	1.47e-132	kdgA	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	2-dehydro-3-deoxy-phosphogluconate aldolase
PDAMAKEP_00291	2.83e-237	kdgK	2.7.1.45	-	G	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	COG0524 Sugar kinases, ribokinase family
PDAMAKEP_00292	4.51e-237	kdgR	-	-	K	ko:K02525	-	ko00000,ko03000	transcriptional
PDAMAKEP_00293	4.2e-203	kduI	5.3.1.17	-	G	ko:K01815	ko00040,map00040	ko00000,ko00001,ko01000	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
PDAMAKEP_00294	7.67e-175	kduD	1.1.1.127	-	IQ	ko:K00065	ko00040,map00040	ko00000,ko00001,ko01000	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PDAMAKEP_00295	0.0	ypvA	3.6.4.12	-	KL	ko:K03722	-	ko00000,ko01000,ko03400	COG1199 Rad3-related DNA helicases
PDAMAKEP_00297	8.14e-286	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
PDAMAKEP_00298	2.97e-60	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PDAMAKEP_00299	3.99e-127	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
PDAMAKEP_00300	4.87e-299	yprB	-	-	L	ko:K07502	-	ko00000	RNase_H superfamily
PDAMAKEP_00301	0.0	yprA	-	-	L	ko:K06877	-	ko00000	COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster
PDAMAKEP_00302	1.34e-112	ypqE	-	-	G	ko:K02777	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	COG2190 Phosphotransferase system IIA components
PDAMAKEP_00303	1.24e-94	hspX	-	-	O	ko:K06335,ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
PDAMAKEP_00304	8.72e-68	yppG	-	-	S	-	-	-	YppG-like protein
PDAMAKEP_00305	9.21e-11	-	-	-	S	-	-	-	YppF-like protein
PDAMAKEP_00306	3.52e-65	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PDAMAKEP_00307	3.57e-215	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PDAMAKEP_00308	7.14e-11	yppE	-	-	S	-	-	-	Bacterial domain of unknown function (DUF1798)
PDAMAKEP_00311	4.54e-241	yppC	-	-	S	-	-	-	Protein of unknown function (DUF2515)
PDAMAKEP_00312	3.2e-150	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PDAMAKEP_00313	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
PDAMAKEP_00314	5.81e-121	ypoC	-	-	-	-	-	-	-
PDAMAKEP_00315	3.57e-158	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PDAMAKEP_00316	6.62e-165	dnaD	-	-	L	ko:K02086	-	ko00000	DNA replication protein DnaD
PDAMAKEP_00317	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	asparaginyl-tRNA
PDAMAKEP_00318	4.37e-285	aspB	2.6.1.1, 2.6.1.14	-	E	ko:K00812,ko:K22457	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase
PDAMAKEP_00319	2.27e-103	ypmB	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_00320	1.52e-32	ypmA	-	-	S	-	-	-	Protein of unknown function (DUF4264)
PDAMAKEP_00321	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
PDAMAKEP_00322	4.16e-85	panD	4.1.1.11	-	H	ko:K01579	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
PDAMAKEP_00323	1.83e-198	panC	6.3.2.1	-	H	ko:K01918	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
PDAMAKEP_00324	4.85e-194	panB	2.1.2.11	-	H	ko:K00606	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate
PDAMAKEP_00325	4.87e-234	birA	6.3.4.15	-	K	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PDAMAKEP_00326	6.13e-278	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PDAMAKEP_00327	2.01e-266	bshA	-	GT4	M	ko:K00754	-	ko00000,ko01000	N-acetyl-alpha-D-glucosaminyl L-malate synthase
PDAMAKEP_00328	7.71e-166	bshB1	-	-	S	ko:K01463	-	ko00000,ko01000	proteins, LmbE homologs
PDAMAKEP_00329	2.52e-93	mgsA	4.2.3.3	-	G	ko:K01734	ko00640,ko01120,map00640,map01120	ko00000,ko00001,ko01000	methylglyoxal synthase
PDAMAKEP_00330	1.39e-188	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PDAMAKEP_00331	5.83e-73	ypjD	-	-	S	-	-	-	Nucleotide pyrophosphohydrolase
PDAMAKEP_00332	2.14e-199	ypjC	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2179)
PDAMAKEP_00333	6.84e-183	ypjB	-	-	S	-	-	-	sporulation protein
PDAMAKEP_00334	1.2e-127	ypjA	-	-	S	-	-	-	membrane
PDAMAKEP_00335	5.71e-191	qcrC	-	-	C	ko:K03888	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002	Menaquinol-cytochrome c reductase cytochrome b c subunit
PDAMAKEP_00336	8.76e-166	qcrB	-	-	C	ko:K03887	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002	COG1290 Cytochrome b subunit of the bc complex
PDAMAKEP_00337	3.35e-126	qcrA	-	-	C	ko:K03886	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Menaquinol-cytochrome c reductase
PDAMAKEP_00338	1.59e-99	ypiF	-	-	S	-	-	-	Protein of unknown function (DUF2487)
PDAMAKEP_00339	7.45e-129	ypiB	-	-	S	-	-	-	Belongs to the UPF0302 family
PDAMAKEP_00340	8.74e-298	ypiA	-	-	S	-	-	-	COG0457 FOG TPR repeat
PDAMAKEP_00341	1.35e-299	aroA	2.5.1.19	-	E	ko:K00800	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PDAMAKEP_00342	9.9e-264	tyrA	1.3.1.12	-	E	ko:K04517	ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	prephenate dehydrogenase
PDAMAKEP_00343	8.34e-255	hisC	2.6.1.9	-	E	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PDAMAKEP_00344	1.56e-185	trpA	4.2.1.20	-	E	ko:K01695	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PDAMAKEP_00345	5.18e-292	trpB	4.2.1.20, 5.3.1.24	-	E	ko:K01696,ko:K01817	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PDAMAKEP_00346	4.5e-150	trpF	5.3.1.24	-	E	ko:K01817	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TrpF family
PDAMAKEP_00347	2.07e-145	trpC	4.1.1.48, 5.3.1.24	-	E	ko:K01609,ko:K13498	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TrpC family
PDAMAKEP_00348	1.18e-227	trpD	2.4.2.18, 4.1.3.27	-	E	ko:K00766,ko:K13497	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PDAMAKEP_00349	0.0	trpE	4.1.3.27	-	EH	ko:K01657	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PDAMAKEP_00350	9.82e-84	aroH	5.4.99.5	-	E	ko:K06208	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis
PDAMAKEP_00351	4.7e-262	aroB	4.2.3.4	-	E	ko:K01735	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PDAMAKEP_00352	1.44e-277	aroC	4.2.3.5	-	E	ko:K01736	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PDAMAKEP_00353	8.69e-182	cheR	2.1.1.80	-	NT	ko:K00575	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko01000,ko02035	COG1352 Methylase of chemotaxis methyl-accepting proteins
PDAMAKEP_00354	2.17e-104	ndk	2.7.4.6	-	F	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	ko00000,ko00001,ko00002,ko01000,ko04131	Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
PDAMAKEP_00355	1.17e-248	hepT	2.5.1.30, 2.5.1.83	-	H	ko:K00805,ko:K21275	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PDAMAKEP_00356	1.1e-168	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PDAMAKEP_00357	8.72e-178	hepS	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1
PDAMAKEP_00358	5.13e-46	mtrB	-	-	K	ko:K06285	-	ko00000,ko03000	Required for transcription attenuation control in the Trp operon. This trans-acting factor seems to recognize a 10 bases nucleotide sequence in the Trp leader transcript causing transcription termination. Binds the leader RNA only in presence of L-tryptophan
PDAMAKEP_00359	2.1e-129	folE	3.5.4.16	-	H	ko:K01495	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	GTP cyclohydrolase
PDAMAKEP_00360	1.07e-57	hbs	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PDAMAKEP_00361	0.0	spoIVA	-	-	S	ko:K06398	-	ko00000	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
PDAMAKEP_00362	1.02e-174	yphF	-	-	-	-	-	-	-
PDAMAKEP_00363	7.09e-27	yphE	-	-	S	-	-	-	Protein of unknown function (DUF2768)
PDAMAKEP_00364	8.18e-243	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
PDAMAKEP_00365	4.77e-316	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
PDAMAKEP_00366	1.02e-38	ypzH	-	-	-	-	-	-	-
PDAMAKEP_00367	4.35e-207	yphB	-	-	S	ko:K05739	-	ko00000	YIEGIA protein
PDAMAKEP_00368	2.62e-132	yphA	-	-	-	-	-	-	-
PDAMAKEP_00369	1.13e-11	-	-	-	S	-	-	-	YpzI-like protein
PDAMAKEP_00370	7.55e-59	orfX1	-	-	L	-	-	-	Transposase
PDAMAKEP_00371	5.6e-173	-	-	-	L	-	-	-	Integrase core domain
PDAMAKEP_00372	3.66e-232	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PDAMAKEP_00373	7.8e-262	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
PDAMAKEP_00374	2.36e-145	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
PDAMAKEP_00375	1.74e-32	-	-	-	S	-	-	-	Family of unknown function (DUF5359)
PDAMAKEP_00376	1.17e-137	ypfA	-	-	M	-	-	-	Flagellar protein YcgR
PDAMAKEP_00377	0.0	ypeB	-	-	H	ko:K06313	-	ko00000	sporulation protein
PDAMAKEP_00378	3.56e-203	sleB	3.5.1.28	-	M	ko:K01449	-	ko00000,ko01000	Spore cortex-lytic enzyme
PDAMAKEP_00379	7.18e-153	prsW	-	-	S	-	-	-	Involved in the degradation of specific anti-sigma factors
PDAMAKEP_00380	1.52e-223	ypdA	1.8.1.9	-	O	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	COG0492 Thioredoxin reductase
PDAMAKEP_00381	1.42e-308	gudB	1.4.1.2	-	E	ko:K00260	ko00220,ko00250,ko00430,ko00910,ko01100,map00220,map00250,map00430,map00910,map01100	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
PDAMAKEP_00382	3.22e-135	mecB	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC
PDAMAKEP_00383	1.24e-187	ypbG	-	-	S	ko:K07098	-	ko00000	Calcineurin-like phosphoesterase superfamily domain
PDAMAKEP_00384	4.76e-105	ypbF	-	-	S	-	-	-	Protein of unknown function (DUF2663)
PDAMAKEP_00385	2.15e-125	ypbE	-	-	M	-	-	-	Lysin motif
PDAMAKEP_00386	4.14e-127	ypbD	-	-	S	ko:K07052	-	ko00000	metal-dependent membrane protease
PDAMAKEP_00387	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	DNA helicase
PDAMAKEP_00388	4.66e-257	ypbB	5.1.3.1	-	S	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	protein conserved in bacteria
PDAMAKEP_00389	8.35e-55	fer	-	-	C	ko:K05337	-	ko00000	Ferredoxin
PDAMAKEP_00390	3.07e-122	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PDAMAKEP_00391	0.0	serA	1.1.1.399, 1.1.1.95	-	E	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDAMAKEP_00392	7.94e-173	aroD	4.2.1.10	-	E	ko:K03785	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
PDAMAKEP_00393	6.08e-254	rsiX	-	-	-	-	-	-	-
PDAMAKEP_00394	1.08e-133	sigX	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PDAMAKEP_00395	0.0	resE	2.7.13.3	-	T	ko:K07651	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PDAMAKEP_00396	1.69e-171	resD	-	-	T	ko:K07775	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PDAMAKEP_00397	1.1e-277	resC	-	-	O	-	-	-	'COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component'
PDAMAKEP_00398	0.0	resB	-	-	O	ko:K07399	-	ko00000	COG1333 ResB protein required for cytochrome c biosynthesis
PDAMAKEP_00399	1.5e-128	resA	-	-	CO	-	-	-	Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c
PDAMAKEP_00400	1.81e-168	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
PDAMAKEP_00401	8.62e-114	spmB	-	-	S	ko:K06374	-	ko00000	Spore maturation protein
PDAMAKEP_00402	2.17e-134	spmA	-	-	S	ko:K06373	-	ko00000	Spore maturation protein
PDAMAKEP_00403	4.11e-273	dacB	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PDAMAKEP_00404	2.92e-126	ypuI	-	-	S	-	-	-	Protein of unknown function (DUF3907)
PDAMAKEP_00405	8.17e-135	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PDAMAKEP_00406	3e-164	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PDAMAKEP_00407	1.19e-118	ypuF	-	-	S	ko:K09763	-	ko00000	Domain of unknown function (DUF309)
PDAMAKEP_00408	1.12e-83	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PDAMAKEP_00409	8.41e-107	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PDAMAKEP_00410	1.27e-291	ribBA	3.5.4.25, 4.1.99.12	-	H	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PDAMAKEP_00411	3.55e-147	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin synthase
PDAMAKEP_00412	2.41e-259	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PDAMAKEP_00413	5.98e-72	ypuD	-	-	-	-	-	-	-
PDAMAKEP_00414	3.11e-121	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PDAMAKEP_00416	7.41e-45	ypzJ	-	-	S	ko:K07069	-	ko00000	nucleic-acid-binding protein containing a Zn-ribbon domain
PDAMAKEP_00417	1.13e-09	-	-	-	S	-	-	-	SNARE associated Golgi protein
PDAMAKEP_00419	5.94e-13	-	-	-	M	-	-	-	Domain of Unknown Function (DUF1259)
PDAMAKEP_00421	1.23e-105	ppiB	5.2.1.8	-	O	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PDAMAKEP_00422	3.12e-192	ypuA	-	-	S	-	-	-	Secreted protein
PDAMAKEP_00423	0.0	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PDAMAKEP_00424	0.0	spoVAF	-	-	EG	ko:K06408	-	ko00000	Stage V sporulation protein AF
PDAMAKEP_00425	1.85e-143	-	-	-	S	ko:K06407	-	ko00000	stage V sporulation protein
PDAMAKEP_00426	2.15e-75	spoVAEB	-	-	S	ko:K06407	-	ko00000	stage V sporulation protein
PDAMAKEP_00427	8.55e-246	spoVAD	-	-	I	ko:K06406	-	ko00000	Stage V sporulation protein AD
PDAMAKEP_00428	6.71e-102	spoVAC	-	-	S	ko:K06405	-	ko00000	stage V sporulation protein AC
PDAMAKEP_00429	5.43e-90	spoVAB	-	-	S	ko:K06404	-	ko00000	Stage V sporulation protein AB
PDAMAKEP_00430	4.7e-143	spoVAA	-	-	S	ko:K06403	-	ko00000	Stage V sporulation protein AA
PDAMAKEP_00431	1.18e-174	sigF	-	-	K	ko:K03091	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PDAMAKEP_00432	3.93e-99	spoIIAB	2.7.11.1	-	F	ko:K06379	-	ko00000,ko01000	Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti-anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition
PDAMAKEP_00433	1.98e-76	spoIIAA	-	-	T	ko:K06378	-	ko00000	Belongs to the anti-sigma-factor antagonist family
PDAMAKEP_00434	3.37e-271	dacF	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PDAMAKEP_00435	5.66e-190	punA	2.4.2.1, 2.4.2.28	-	F	ko:K00772,ko:K03783	ko00230,ko00240,ko00270,ko00760,ko01100,ko01110,map00230,map00240,map00270,map00760,map01100,map01110	ko00000,ko00001,ko00002,ko01000	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
PDAMAKEP_00436	6.8e-294	deoB	5.4.2.7	-	G	ko:K01839	ko00030,ko00230,map00030,map00230	ko00000,ko00001,ko01000	Phosphotransfer between the C1 and C5 carbon atoms of pentose
PDAMAKEP_00437	3.91e-214	xerD	-	-	L	ko:K04763	-	ko00000,ko03036	recombinase XerD
PDAMAKEP_00438	2.25e-49	-	-	-	S	-	-	-	Protein of unknown function (DUF4227)
PDAMAKEP_00439	2.26e-104	fur	-	-	P	ko:K03711	-	ko00000,ko03000	Belongs to the Fur family
PDAMAKEP_00440	1.96e-139	spoIIM	-	-	S	ko:K06384	-	ko00000	Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane
PDAMAKEP_00441	3.08e-43	yqkK	-	-	-	-	-	-	-
PDAMAKEP_00442	3.95e-309	mleA	1.1.1.38	-	C	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	ko00000,ko00001,ko01000	malic enzyme
PDAMAKEP_00443	0.0	mleN	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter
PDAMAKEP_00444	0.0	aspA	4.3.1.1	-	E	ko:K01744	ko00250,ko01100,map00250,map01100	ko00000,ko00001,ko01000	Aspartate ammonia-lyase
PDAMAKEP_00445	1.77e-238	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase
PDAMAKEP_00446	1.29e-76	ansR	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_00447	4.16e-280	yqxK	-	-	L	-	-	-	DNA helicase
PDAMAKEP_00448	4.07e-120	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	Belongs to the Nudix hydrolase family
PDAMAKEP_00449	8.21e-10	-	-	-	S	-	-	-	Protein of unknown function (DUF3936)
PDAMAKEP_00450	1.47e-214	yqkF	-	-	C	-	-	-	oxidoreductases (related to aryl-alcohol dehydrogenases)
PDAMAKEP_00451	6.61e-26	yqkE	-	-	S	-	-	-	Protein of unknown function (DUF3886)
PDAMAKEP_00452	1.38e-223	yqkD	-	-	S	ko:K06889	-	ko00000	COG1073 Hydrolases of the alpha beta superfamily
PDAMAKEP_00453	1.12e-53	yqkC	-	-	S	-	-	-	Protein of unknown function (DUF2552)
PDAMAKEP_00454	6.17e-73	yqkB	-	-	S	-	-	-	Belongs to the HesB IscA family
PDAMAKEP_00455	1.87e-247	yqkA	-	-	K	-	-	-	GrpB protein
PDAMAKEP_00456	2.25e-78	yqjZ	-	-	S	-	-	-	enzyme involved in biosynthesis of extracellular polysaccharides
PDAMAKEP_00457	2.22e-112	yqjY	-	-	K	ko:K06977	-	ko00000	acetyltransferase
PDAMAKEP_00458	1.87e-65	yqiX	-	-	S	-	-	-	YolD-like protein
PDAMAKEP_00459	2.43e-303	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PDAMAKEP_00461	6.83e-288	yqjV	-	-	G	-	-	-	Major Facilitator Superfamily
PDAMAKEP_00463	1.28e-93	yqjT	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PDAMAKEP_00464	2.69e-228	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
PDAMAKEP_00465	0.0	dsdA	4.3.1.18	-	E	ko:K01753	ko00260,map00260	ko00000,ko00001,ko01000	Belongs to the serine threonine dehydratase family. DsdA subfamily
PDAMAKEP_00466	1.62e-183	yqjQ	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
PDAMAKEP_00467	1.56e-227	yqjP	-	-	S	-	-	-	COG0491 Zn-dependent hydrolases, including glyoxylases
PDAMAKEP_00468	9.98e-183	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PDAMAKEP_00469	0.0	rocB	-	-	E	-	-	-	arginine degradation protein
PDAMAKEP_00470	1.21e-245	namA	1.6.99.1	-	C	ko:K00354	-	ko00000,ko01000	Catalyzes the reduction of the double bond of an array of alpha,beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes
PDAMAKEP_00471	6.4e-187	yqjL	-	-	S	-	-	-	hydrolases or acyltransferases (alpha beta hydrolase superfamily)
PDAMAKEP_00472	5.6e-173	-	-	-	L	-	-	-	Integrase core domain
PDAMAKEP_00473	1.67e-17	orfX1	-	-	L	-	-	-	Transposase
PDAMAKEP_00474	8.59e-27	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
PDAMAKEP_00475	7.66e-222	rnz	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PDAMAKEP_00476	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PDAMAKEP_00477	0.0	gnd	1.1.1.343, 1.1.1.44	-	G	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PDAMAKEP_00478	4.32e-298	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PDAMAKEP_00479	1.77e-32	yqzJ	-	-	-	-	-	-	-
PDAMAKEP_00480	1.03e-178	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PDAMAKEP_00481	1.57e-177	yqjF	-	-	S	ko:K09166	-	ko00000	Uncharacterized conserved protein (COG2071)
PDAMAKEP_00482	1.37e-68	-	-	-	L	-	-	-	transposase activity
PDAMAKEP_00483	2.88e-186	-	-	-	L	ko:K07497	-	ko00000	Molecular Function DNA binding, Biological Process DNA recombination
PDAMAKEP_00484	5.26e-259	yqjE	3.4.11.14, 3.4.11.4	-	E	ko:K01258,ko:K01263	-	ko00000,ko01000,ko01002	COG2195 Di- and tripeptidases
PDAMAKEP_00485	0.0	yqjD	2.1.3.15, 6.4.1.3	-	I	ko:K01966	ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
PDAMAKEP_00486	4.67e-95	mce	5.1.99.1	-	E	ko:K05606	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	COG0346 Lactoylglutathione lyase and related lyases
PDAMAKEP_00488	4.01e-127	yqjB	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_00489	1.73e-221	yqjA	-	-	S	-	-	-	Putative aromatic acid exporter C-terminal domain
PDAMAKEP_00490	1.28e-166	artM	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	COG1126 ABC-type polar amino acid transport system, ATPase component
PDAMAKEP_00491	8.94e-143	artQ	-	-	E	ko:K02029	-	ko00000,ko00002,ko02000	COG0765 ABC-type amino acid transport system, permease component
PDAMAKEP_00492	1.43e-175	artP	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 3 family
PDAMAKEP_00493	6.29e-100	yqiW	-	-	S	-	-	-	Belongs to the UPF0403 family
PDAMAKEP_00494	5.76e-212	bmrU	-	-	I	-	-	-	COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
PDAMAKEP_00495	1.26e-266	norA	-	-	EGP	ko:K08153,ko:K19576,ko:K19578	-	ko00000,ko00002,ko02000	COG0477 Permeases of the major facilitator superfamily
PDAMAKEP_00496	9.06e-195	-	-	-	K	ko:K19575	-	ko00000,ko00002,ko03000	helix_turn_helix, mercury resistance
PDAMAKEP_00497	1.87e-288	bkdB	2.3.1.12, 2.3.1.168	-	C	ko:K00627,ko:K09699	ko00010,ko00020,ko00280,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00280,map00620,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PDAMAKEP_00498	6.92e-235	bfmBAB	1.2.4.4	-	C	ko:K00167,ko:K21417	ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130	br01601,ko00000,ko00001,ko00002,ko01000	COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
PDAMAKEP_00499	1.92e-238	bfmBAA	1.2.4.4	-	C	ko:K00166	ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130	br01601,ko00000,ko00001,ko00002,ko01000	COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
PDAMAKEP_00500	0.0	bfmBC	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
PDAMAKEP_00501	1.18e-255	buk	2.7.2.7	-	C	ko:K00929	ko00650,ko01100,map00650,map01100	ko00000,ko00001,ko01000	Belongs to the acetokinase family
PDAMAKEP_00502	1.92e-262	ldh	1.4.1.9	-	E	ko:K00263	ko00280,ko00290,ko01100,ko01110,ko01130,map00280,map00290,map01100,map01110,map01130	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
PDAMAKEP_00503	1.5e-199	ptb	2.3.1.19	-	C	ko:K00634	ko00650,ko01100,map00650,map01100	ko00000,ko00001,ko01000	phosphate butyryltransferase
PDAMAKEP_00504	0.0	bkdR	-	-	KT	-	-	-	Transcriptional regulator
PDAMAKEP_00505	1.56e-46	yqzF	-	-	S	-	-	-	Protein of unknown function (DUF2627)
PDAMAKEP_00506	4.18e-207	prpB	4.1.3.30, 5.4.2.9	-	G	ko:K01841,ko:K03417	ko00440,ko00640,ko01100,ko01120,ko01130,map00440,map00640,map01100,map01120,map01130	ko00000,ko00001,ko01000	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
PDAMAKEP_00507	0.0	prpD	4.2.1.79	-	S	ko:K01720	ko00640,map00640	ko00000,ko00001,ko01000	2-methylcitrate dehydratase
PDAMAKEP_00508	1.66e-267	mmgD	2.3.3.1	-	C	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Belongs to the citrate synthase family
PDAMAKEP_00509	8.55e-269	mmgC	-	-	I	ko:K18244	-	ko00000,ko01000	acyl-CoA dehydrogenase
PDAMAKEP_00510	1.98e-198	mmgB	1.1.1.157	-	I	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	ko00000,ko00001,ko01000	Dehydrogenase
PDAMAKEP_00511	1.91e-279	mmgA	2.3.1.9	-	I	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
PDAMAKEP_00512	1.88e-165	yqiK	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
PDAMAKEP_00513	3.83e-137	lytC_1	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	Cell wall hydrolase autolysin
PDAMAKEP_00514	1.36e-36	-	-	-	-	-	-	-	-
PDAMAKEP_00516	1.15e-272	yqiG	-	-	C	-	-	-	COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family
PDAMAKEP_00518	1.89e-186	spo0A	-	-	KT	ko:K07699	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process
PDAMAKEP_00519	2.96e-302	spoIVB	3.4.21.116	-	M	ko:K06399	-	ko00000,ko01000,ko01002	Stage IV sporulation protein B
PDAMAKEP_00520	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
PDAMAKEP_00521	4.38e-102	argR	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
PDAMAKEP_00522	1.77e-198	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	rRNA methylase
PDAMAKEP_00523	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PDAMAKEP_00524	4.2e-209	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PDAMAKEP_00525	1.09e-51	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDAMAKEP_00526	3.55e-312	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDAMAKEP_00527	1.07e-200	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PDAMAKEP_00528	4.8e-86	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PDAMAKEP_00529	9.55e-88	yqhY	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_00530	0.0	accC	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
PDAMAKEP_00531	3.59e-90	accB	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PDAMAKEP_00532	4.04e-134	spoIIIAH	-	-	S	ko:K06397	-	ko00000	SpoIIIAH-like protein
PDAMAKEP_00533	1.08e-148	spoIIIAG	-	-	S	ko:K06396	-	ko00000	stage III sporulation protein AG
PDAMAKEP_00534	2.58e-131	spoIIIAF	-	-	S	ko:K06395	-	ko00000	Stage III sporulation protein AF (Spore_III_AF)
PDAMAKEP_00535	7.65e-257	spoIIIAE	-	-	S	ko:K06394	-	ko00000	stage III sporulation protein AE
PDAMAKEP_00536	1.93e-77	spoIIIAD	-	-	S	ko:K06393	-	ko00000	Stage III sporulation protein AD
PDAMAKEP_00537	1.63e-39	spoIIIAC	-	-	S	ko:K06392	-	ko00000	stage III sporulation protein AC
PDAMAKEP_00538	5.69e-111	spoIIIAB	-	-	S	ko:K06391	-	ko00000	Stage III sporulation protein
PDAMAKEP_00539	8.22e-217	spoIIIAA	-	-	S	ko:K06390	-	ko00000	stage III sporulation protein AA
PDAMAKEP_00540	9.89e-50	yqhV	-	-	S	-	-	-	Protein of unknown function (DUF2619)
PDAMAKEP_00541	4.8e-128	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PDAMAKEP_00542	2.99e-249	yqhT	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	COG0006 Xaa-Pro aminopeptidase
PDAMAKEP_00543	1.94e-100	aroQ	4.2.1.10	-	E	ko:K03786	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes a trans-dehydration via an enolate intermediate
PDAMAKEP_00544	3.27e-120	yqhR	-	-	S	-	-	-	Conserved membrane protein YqhR
PDAMAKEP_00545	1.48e-220	yqhQ	-	-	S	-	-	-	Protein of unknown function (DUF1385)
PDAMAKEP_00546	5.18e-81	yqhP	-	-	-	-	-	-	-
PDAMAKEP_00547	9.94e-210	yqhO	-	-	S	ko:K07001	-	ko00000	esterase of the alpha-beta hydrolase superfamily
PDAMAKEP_00548	1.97e-97	mntR	-	-	K	ko:K03709	-	ko00000,ko03000	Involved in manganese homeostasis. Might activate the transcription of the mntABCD operon
PDAMAKEP_00549	5.3e-203	lipM	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domain of GcvH, an intermediate carrier during protein lipoylation
PDAMAKEP_00550	2.51e-81	yqhL	-	-	P	-	-	-	COG0607 Rhodanese-related sulfurtransferase
PDAMAKEP_00551	0.0	gcvPB	1.4.4.2	-	E	ko:K00283	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko01000	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PDAMAKEP_00552	0.0	gcvPA	1.4.4.2	-	E	ko:K00282	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko01000	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PDAMAKEP_00553	7.79e-261	gcvT	2.1.2.10	-	E	ko:K00605	ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002,ko01000	The glycine cleavage system catalyzes the degradation of glycine
PDAMAKEP_00554	0.0	yqhH	-	-	L	-	-	-	COG0553 Superfamily II DNA RNA helicases, SNF2 family
PDAMAKEP_00555	1.07e-195	yqhG	-	-	S	-	-	-	Bacterial protein YqhG of unknown function
PDAMAKEP_00556	4.84e-34	sinI	-	-	S	ko:K06372	-	ko00000	Anti-repressor SinI
PDAMAKEP_00557	3.69e-72	sinR	-	-	K	ko:K19449	-	ko00000,ko03000	transcriptional
PDAMAKEP_00558	9e-182	tasA_1	-	-	S	ko:K06336	-	ko00000,ko01002	Cell division protein FtsN
PDAMAKEP_00559	1.74e-96	sipW	3.4.21.89	-	U	ko:K13280	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	Signal peptidase
PDAMAKEP_00560	1.92e-128	yqxM	-	-	-	ko:K19433	-	ko00000	-
PDAMAKEP_00561	3.68e-70	yqzG	-	-	S	-	-	-	Protein of unknown function (DUF3889)
PDAMAKEP_00562	2.84e-36	yqzE	-	-	S	-	-	-	YqzE-like protein
PDAMAKEP_00563	3.78e-57	-	-	-	S	ko:K02249	-	ko00000,ko00002,ko02044	ComG operon protein 7
PDAMAKEP_00564	1.17e-59	comGF	-	-	U	ko:K02246,ko:K02248	-	ko00000,ko00002,ko02044	Putative Competence protein ComGF
PDAMAKEP_00565	3.45e-76	comGE	-	-	-	ko:K02247	-	ko00000,ko00002,ko02044	-
PDAMAKEP_00566	5.39e-91	gspH	-	-	NU	ko:K02246,ko:K02457,ko:K02459,ko:K02672,ko:K08084,ko:K10926	ko03070,ko05111,map03070,map05111	ko00000,ko00001,ko00002,ko02035,ko02044	protein transport across the cell outer membrane
PDAMAKEP_00567	1.26e-61	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	Required for transformation and DNA binding
PDAMAKEP_00568	2.55e-211	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	COG1459 Type II secretory pathway, component PulF
PDAMAKEP_00569	1.28e-256	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
PDAMAKEP_00570	2.4e-230	yqxL	-	-	P	-	-	-	Mg2 transporter protein
PDAMAKEP_00571	1.65e-304	yqhB	-	-	S	-	-	-	COG1253 Hemolysins and related proteins containing CBS domains
PDAMAKEP_00572	2.29e-188	yqhA	-	-	T	ko:K17763	-	ko00000,ko03021	COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PDAMAKEP_00574	7.79e-85	yqgZ	1.20.4.1	-	P	ko:K00537,ko:K16509	-	ko00000,ko01000	Belongs to the ArsC family
PDAMAKEP_00575	1.41e-48	yqgY	-	-	S	-	-	-	Protein of unknown function (DUF2626)
PDAMAKEP_00576	3.07e-155	yqgX	3.1.2.6	-	S	ko:K01069	ko00620,map00620	ko00000,ko00001,ko01000	COG0491 Zn-dependent hydrolases, including glyoxylases
PDAMAKEP_00577	1.91e-31	yqgW	-	-	S	-	-	-	Protein of unknown function (DUF2759)
PDAMAKEP_00578	7.34e-66	yqgV	-	-	S	-	-	-	Thiamine-binding protein
PDAMAKEP_00579	7.7e-256	yqgU	-	-	-	-	-	-	-
PDAMAKEP_00580	5.04e-282	yqgT	3.4.19.11	-	E	ko:K01308	-	ko00000,ko01000,ko01002	Gamma-D-glutamyl-L-diamino acid endopeptidase
PDAMAKEP_00581	0.0	yqgS	2.7.8.20	-	M	ko:K01138,ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Belongs to the LTA synthase family
PDAMAKEP_00582	3.28e-230	glcK	2.7.1.2	-	G	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Glucokinase
PDAMAKEP_00583	9.15e-45	yqgQ	-	-	S	-	-	-	Protein conserved in bacteria
PDAMAKEP_00584	0.0	gluP	3.4.21.105	-	O	ko:K19225	-	ko00000,ko01000,ko01002	membrane protein (homolog of Drosophila rhomboid)
PDAMAKEP_00585	3.38e-14	yqgO	-	-	-	-	-	-	-
PDAMAKEP_00586	7.98e-137	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PDAMAKEP_00587	6.25e-29	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
PDAMAKEP_00588	1.1e-254	yqgM	2.4.1.250	-	M	ko:K15521	-	ko00000,ko01000	Glycosyl transferases group 1
PDAMAKEP_00590	3.42e-68	yqzD	-	-	-	-	-	-	-
PDAMAKEP_00591	6.33e-93	yqzC	-	-	S	-	-	-	YceG-like family
PDAMAKEP_00592	2.22e-186	pstB	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PDAMAKEP_00593	9.78e-190	pstBA	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PDAMAKEP_00594	3.55e-200	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease
PDAMAKEP_00595	7.11e-203	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
PDAMAKEP_00596	1.26e-203	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
PDAMAKEP_00597	0.0	pbpA	-	-	M	ko:K21465,ko:K21466	ko00550,map00550	ko00000,ko00001,ko01011	penicillin-binding protein
PDAMAKEP_00598	1.54e-290	yqgE	-	-	EGP	ko:K08222	-	ko00000,ko02000	Major facilitator superfamily
PDAMAKEP_00599	1.31e-147	sodA	1.15.1.1	-	P	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	ko00000,ko00001,ko01000	radicals which are normally produced within the cells and which are toxic to biological systems
PDAMAKEP_00600	8.25e-101	yqgC	-	-	S	ko:K09793	-	ko00000	protein conserved in bacteria
PDAMAKEP_00601	8.89e-170	yqgB	-	-	S	-	-	-	Protein of unknown function (DUF1189)
PDAMAKEP_00602	3.4e-98	yqgA	-	-	-	-	-	-	-
PDAMAKEP_00603	1.35e-61	yqfZ	-	-	M	ko:K06417	-	ko00000	LysM domain
PDAMAKEP_00604	5.22e-257	ispG	1.17.7.1, 1.17.7.3	-	I	ko:K03526	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
PDAMAKEP_00605	2.38e-80	yqfX	-	-	S	-	-	-	membrane
PDAMAKEP_00606	8.25e-142	yqfW	-	-	S	ko:K05967	-	ko00000	Belongs to the 5'(3')-deoxyribonucleotidase family
PDAMAKEP_00607	8.59e-107	zur	-	-	P	ko:K02076	-	ko00000,ko03000	Belongs to the Fur family
PDAMAKEP_00608	2.21e-198	yqfU	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2179)
PDAMAKEP_00609	3.01e-49	yqfT	-	-	S	-	-	-	Protein of unknown function (DUF2624)
PDAMAKEP_00610	1.04e-214	nfo	3.1.21.2	-	L	ko:K01151	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PDAMAKEP_00611	1.09e-310	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PDAMAKEP_00612	8.26e-51	yqfQ	-	-	S	-	-	-	YqfQ-like protein
PDAMAKEP_00613	8.66e-227	ispH	1.17.7.4	-	IM	ko:K03527	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PDAMAKEP_00614	3.26e-72	-	-	-	L	-	-	-	transposase activity
PDAMAKEP_00615	2.88e-186	-	-	-	L	ko:K07497	-	ko00000	Molecular Function DNA binding, Biological Process DNA recombination
PDAMAKEP_00616	2.44e-265	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PDAMAKEP_00617	5.67e-149	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
PDAMAKEP_00618	2.29e-81	cccA	-	-	C	ko:K13300	-	ko00000	COG2010 Cytochrome c, mono- and diheme variants
PDAMAKEP_00619	2.29e-253	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PDAMAKEP_00620	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PDAMAKEP_00621	6.03e-114	yqxD	-	-	S	ko:K09768	-	ko00000	Belongs to the UPF0178 family
PDAMAKEP_00622	6.38e-191	yqfL	2.7.11.33, 2.7.4.28	-	S	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PDAMAKEP_00623	3.29e-144	ccpN	-	-	K	-	-	-	CBS domain
PDAMAKEP_00624	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
PDAMAKEP_00625	2.12e-222	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
PDAMAKEP_00626	7.48e-187	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
PDAMAKEP_00627	5.29e-27	-	-	-	S	-	-	-	YqzL-like protein
PDAMAKEP_00628	8.2e-214	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PDAMAKEP_00629	2.73e-92	cdd	3.5.4.5	-	F	ko:K01489	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
PDAMAKEP_00630	2.26e-78	dgkA	2.7.1.107, 2.7.1.66	-	M	ko:K00887,ko:K00901	ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231	ko00000,ko00001,ko01000	Diacylglycerol kinase
PDAMAKEP_00631	5.02e-105	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PDAMAKEP_00632	0.0	yqfF	-	-	S	ko:K07037	-	ko00000	membrane-associated HD superfamily hydrolase
PDAMAKEP_00634	4.99e-224	phoH	-	-	T	ko:K06217	-	ko00000	Phosphate starvation-inducible protein PhoH
PDAMAKEP_00635	1.04e-242	yqfD	-	-	S	ko:K06438	-	ko00000	Stage IV sporulation
PDAMAKEP_00636	2.07e-60	yqfC	-	-	S	-	-	-	sporulation protein YqfC
PDAMAKEP_00637	3.13e-79	yqfB	-	-	-	-	-	-	-
PDAMAKEP_00638	4.35e-192	yqfA	-	-	S	-	-	-	UPF0365 protein
PDAMAKEP_00639	2.28e-291	yqeZ	-	-	O	ko:K07403	-	ko00000	COG1030 Membrane-bound serine protease (ClpP class)
PDAMAKEP_00640	9.15e-90	yqeY	-	-	S	ko:K09117	-	ko00000	Yqey-like protein
PDAMAKEP_00641	1.03e-26	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
PDAMAKEP_00642	3.37e-200	yqeW	-	-	P	ko:K03324	-	ko00000,ko02000	COG1283 Na phosphate symporter
PDAMAKEP_00643	0.0	yqeV	2.8.4.5	-	J	ko:K18707	-	ko00000,ko01000,ko03016	ribosomal protein S12 methylthiotransferase
PDAMAKEP_00644	1.38e-178	rsmE	2.1.1.193	-	J	ko:K09761	-	ko00000,ko01000,ko03009	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PDAMAKEP_00645	5.63e-226	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Methylates ribosomal protein L11
PDAMAKEP_00646	3.41e-257	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PDAMAKEP_00647	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
PDAMAKEP_00648	4.36e-116	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PDAMAKEP_00649	3.88e-240	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PDAMAKEP_00650	1.96e-274	hemN	-	-	H	-	-	-	Involved in the biosynthesis of porphyrin-containing compound
PDAMAKEP_00651	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PDAMAKEP_00652	7.06e-70	yqxA	-	-	S	-	-	-	Protein of unknown function (DUF3679)
PDAMAKEP_00653	2.73e-283	spoIIP	-	-	M	ko:K06385	-	ko00000	stage II sporulation protein P
PDAMAKEP_00654	3.42e-258	gpr	3.4.24.78	-	C	ko:K06012	-	ko00000,ko01000,ko01002	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
PDAMAKEP_00655	4e-49	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
PDAMAKEP_00656	2.74e-242	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
PDAMAKEP_00657	2.36e-22	-	-	-	S	-	-	-	YqzM-like protein
PDAMAKEP_00658	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
PDAMAKEP_00659	3.25e-137	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	ComE operon protein 2
PDAMAKEP_00660	3.85e-137	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	COG1555 DNA uptake protein and related DNA-binding proteins
PDAMAKEP_00661	1.1e-188	comER	-	-	E	ko:K02239	-	ko00000,ko00002,ko02044	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PDAMAKEP_00662	2.88e-186	-	-	-	L	ko:K07497	-	ko00000	Molecular Function DNA binding, Biological Process DNA recombination
PDAMAKEP_00663	3.26e-72	-	-	-	L	-	-	-	transposase activity
PDAMAKEP_00664	9.8e-179	yqeM	-	-	Q	-	-	-	Methyltransferase
PDAMAKEP_00665	6.61e-80	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PDAMAKEP_00666	3.95e-132	yqeK	-	-	H	-	-	-	HD superfamily hydrolase involved in NAD metabolism
PDAMAKEP_00667	2.47e-141	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PDAMAKEP_00668	8.95e-61	yhbY	-	-	J	ko:K07574	-	ko00000,ko03009	RNA-binding protein containing KH domain, possibly ribosomal protein
PDAMAKEP_00669	4.01e-199	aroE	1.1.1.25	-	E	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PDAMAKEP_00670	4.78e-273	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	In Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
PDAMAKEP_00671	2.17e-123	yqeG	-	-	S	ko:K07015	-	ko00000	hydrolase of the HAD superfamily
PDAMAKEP_00673	2.24e-182	yqeF	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
PDAMAKEP_00674	1.81e-171	xlyA	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	n-acetylmuramoyl-L-alanine amidase
PDAMAKEP_00675	9.36e-135	yqeD	-	-	S	-	-	-	SNARE associated Golgi protein
PDAMAKEP_00676	6.79e-33	yqeC	1.1.1.343, 1.1.1.44	-	G	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	6-phosphogluconate dehydrogenase
PDAMAKEP_00677	1.04e-160	yqeC	1.1.1.343, 1.1.1.44	-	G	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	6-phosphogluconate dehydrogenase
PDAMAKEP_00678	4.28e-167	-	-	-	-	-	-	-	-
PDAMAKEP_00679	9.81e-47	nucB	-	-	M	-	-	-	Deoxyribonuclease NucA/NucB
PDAMAKEP_00680	1.1e-72	sigK	-	-	K	ko:K03091	-	ko00000,ko03021	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PDAMAKEP_00681	0.0	-	-	-	L	ko:K06400	-	ko00000	Recombinase
PDAMAKEP_00682	5.88e-115	-	-	-	-	-	-	-	-
PDAMAKEP_00683	3.21e-305	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PDAMAKEP_00685	6.04e-170	-	-	-	S	ko:K06366	ko02024,map02024	ko00000,ko00001,ko01000	Aspartate phosphatase response regulator
PDAMAKEP_00688	0.0	-	-	-	A	ko:K21491	-	ko00000,ko01000,ko02048	Pre-toxin TG
PDAMAKEP_00689	1.08e-132	-	-	-	S	ko:K21492	-	ko00000,ko02048	Suppressor of fused protein (SUFU)
PDAMAKEP_00690	4.84e-43	-	-	-	-	-	-	-	-
PDAMAKEP_00691	3.13e-164	-	-	-	L	-	-	-	helicase
PDAMAKEP_00693	9.79e-171	-	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	N-acetylmuramoyl-L-alanine amidase
PDAMAKEP_00694	3.41e-88	-	-	-	S	-	-	-	Bacteriophage holin family
PDAMAKEP_00695	2.41e-204	xepA	-	-	-	-	-	-	-
PDAMAKEP_00696	3.04e-29	-	-	-	-	-	-	-	-
PDAMAKEP_00697	1.13e-70	xkdW	-	-	S	-	-	-	XkdW protein
PDAMAKEP_00698	3.37e-273	-	-	-	-	-	-	-	-
PDAMAKEP_00699	5.62e-50	-	-	-	-	-	-	-	-
PDAMAKEP_00700	1.36e-126	-	-	-	S	-	-	-	Uncharacterised protein conserved in bacteria (DUF2313)
PDAMAKEP_00701	2.91e-233	-	-	-	S	-	-	-	Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology
PDAMAKEP_00702	8.65e-87	xkdS	-	-	S	-	-	-	Protein of unknown function (DUF2634)
PDAMAKEP_00703	9.93e-43	xkdR	-	-	S	-	-	-	Protein of unknown function (DUF2577)
PDAMAKEP_00704	6.31e-226	xkdQ	-	-	G	-	-	-	NLP P60 protein
PDAMAKEP_00705	3.49e-151	xkdP	-	-	S	-	-	-	Lysin motif
PDAMAKEP_00706	0.0	xkdO	-	-	L	-	-	-	Transglycosylase SLT domain
PDAMAKEP_00707	7.83e-89	-	-	-	S	-	-	-	Phage XkdN-like tail assembly chaperone protein, TAC
PDAMAKEP_00708	7.03e-98	xkdM	-	-	S	-	-	-	Phage tail tube protein
PDAMAKEP_00709	0.0	xkdK	-	-	S	-	-	-	Phage tail sheath C-terminal domain
PDAMAKEP_00710	7.11e-17	-	-	-	-	-	-	-	-
PDAMAKEP_00711	2.19e-100	yqbJ	-	-	-	-	-	-	-
PDAMAKEP_00712	1.08e-113	-	-	-	S	-	-	-	Bacteriophage HK97-gp10, putative tail-component
PDAMAKEP_00713	5.83e-84	yqbH	-	-	S	-	-	-	Domain of unknown function (DUF3599)
PDAMAKEP_00714	5.83e-87	-	-	-	S	-	-	-	Protein of unknown function (DUF3199)
PDAMAKEP_00715	1.55e-62	-	-	-	S	-	-	-	YqbF, hypothetical protein domain
PDAMAKEP_00716	9.21e-216	xkdG	-	-	S	-	-	-	Phage capsid family
PDAMAKEP_00717	4.46e-167	yqbD	-	-	L	-	-	-	Putative phage serine protease XkdF
PDAMAKEP_00718	5.73e-76	-	-	-	-	-	-	-	-
PDAMAKEP_00719	3.6e-194	-	-	-	S	-	-	-	Phage Mu protein F like protein
PDAMAKEP_00720	0.0	yqbA	-	-	S	-	-	-	portal protein
PDAMAKEP_00721	5.32e-306	yqaT	-	-	S	ko:K06909	-	ko00000	phage terminase, large subunit
PDAMAKEP_00722	3.84e-149	yqaS	-	-	L	-	-	-	DNA packaging
PDAMAKEP_00725	5.72e-99	yqaQ	-	-	L	-	-	-	Transposase
PDAMAKEP_00727	3.56e-39	wapA	-	-	M	-	-	-	COG3209 Rhs family protein
PDAMAKEP_00728	2.49e-43	yqaO	-	-	S	-	-	-	Phage-like element PBSX protein XtrA
PDAMAKEP_00729	4.28e-92	rusA	-	-	L	-	-	-	Endodeoxyribonuclease RusA
PDAMAKEP_00731	1.51e-208	yqaM	-	-	L	-	-	-	IstB-like ATP binding protein
PDAMAKEP_00732	2.41e-152	yqaL	-	-	L	-	-	-	DnaD domain protein
PDAMAKEP_00733	5.18e-190	recT	-	-	L	ko:K07455	-	ko00000,ko03400	RecT family
PDAMAKEP_00734	4.4e-220	yqaJ	-	-	L	-	-	-	YqaJ-like viral recombinase domain
PDAMAKEP_00738	1.04e-133	-	-	-	-	-	-	-	-
PDAMAKEP_00740	8.88e-24	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
PDAMAKEP_00741	1.88e-42	-	-	-	K	-	-	-	sequence-specific DNA binding
PDAMAKEP_00743	8.07e-128	yqaC	-	-	F	-	-	-	adenylate kinase activity
PDAMAKEP_00745	1.58e-122	xkdA	-	-	E	-	-	-	IrrE N-terminal-like domain
PDAMAKEP_00746	4.46e-79	sigK	-	-	K	ko:K03091	-	ko00000,ko03021	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PDAMAKEP_00747	3.21e-305	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PDAMAKEP_00748	1.94e-145	tetR3	-	-	K	ko:K18476	-	ko00000,ko00002,ko03000	Transcriptional regulator
PDAMAKEP_00749	5.17e-149	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	Multidrug transporter MatE
PDAMAKEP_00750	2.37e-54	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	Multidrug transporter MatE
PDAMAKEP_00751	2.08e-206	ydhT1	3.2.1.78	GH26	G	ko:K01218	ko00051,ko02024,map00051,map02024	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 26 family
PDAMAKEP_00752	4.96e-155	yrkJ	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
PDAMAKEP_00753	3.2e-49	yrkI	-	-	O	-	-	-	Belongs to the sulfur carrier protein TusA family
PDAMAKEP_00754	1.7e-262	yrkH	-	-	P	-	-	-	Rhodanese Homology Domain
PDAMAKEP_00755	7.04e-22	perX	-	-	S	-	-	-	DsrE/DsrF-like family
PDAMAKEP_00756	6.82e-128	yrkF	-	-	OP	-	-	-	Belongs to the sulfur carrier protein TusA family
PDAMAKEP_00757	1.96e-108	yrkE	-	-	O	-	-	-	DsrE/DsrF/DrsH-like family
PDAMAKEP_00758	4.38e-52	yrkD	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_00759	3.32e-28	-	-	-	-	-	-	-	-
PDAMAKEP_00760	4.11e-134	yrkC	-	-	G	-	-	-	Cupin domain
PDAMAKEP_00761	1.24e-194	bltR	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PDAMAKEP_00762	1.08e-268	blt	-	-	EGP	ko:K08153,ko:K19578	-	ko00000,ko00002,ko02000	COG0477 Permeases of the major facilitator superfamily
PDAMAKEP_00763	1.25e-107	bltD	2.3.1.57	-	K	ko:K00657	ko00330,ko01100,ko04216,map00330,map01100,map04216	ko00000,ko00001,ko00002,ko01000	FR47-like protein
PDAMAKEP_00764	7.52e-300	yrkA	-	-	S	-	-	-	COG1253 Hemolysins and related proteins containing CBS domains
PDAMAKEP_00765	2.45e-23	-	-	-	S	-	-	-	YrzO-like protein
PDAMAKEP_00766	7.79e-91	yrdR	-	-	EG	-	-	-	EamA-like transporter family
PDAMAKEP_00767	3.17e-176	-	-	-	L	ko:K07497	-	ko00000	COG2801 Transposase and inactivated derivatives
PDAMAKEP_00768	1.59e-65	-	-	-	L	-	-	-	Transposase
PDAMAKEP_00769	6.64e-108	yrdR	-	-	EG	-	-	-	EamA-like transporter family
PDAMAKEP_00770	1.02e-197	-	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_00771	3.21e-305	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PDAMAKEP_00772	1.67e-251	trkA	-	-	P	ko:K07222	-	ko00000	Oxidoreductase
PDAMAKEP_00773	2.09e-213	czcD	-	-	P	ko:K16264	-	ko00000,ko02000	COG1230 Co Zn Cd efflux system component
PDAMAKEP_00774	8.34e-86	yodA	-	-	S	-	-	-	tautomerase
PDAMAKEP_00775	2.43e-208	-	-	-	K	ko:K21959	-	ko00000,ko03000	LysR substrate binding domain
PDAMAKEP_00776	2.03e-291	brnQ	-	-	E	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
PDAMAKEP_00777	2.79e-66	azlD	-	-	E	-	-	-	Branched-chain amino acid transport protein (AzlD)
PDAMAKEP_00778	6.99e-116	azlC	-	-	E	-	-	-	AzlC protein
PDAMAKEP_00779	8.34e-104	bkdR	-	-	K	-	-	-	helix_turn_helix ASNC type
PDAMAKEP_00780	7.91e-55	yrdF	-	-	K	ko:K03623	-	ko00000	ribonuclease inhibitor
PDAMAKEP_00781	7.64e-290	cypA	1.14.14.46, 1.14.15.13	-	C	ko:K15468,ko:K16593,ko:K17474	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko00199,ko01000,ko01008	Cytochrome P450
PDAMAKEP_00783	4.27e-132	yrdC	-	-	Q	-	-	-	Isochorismatase family
PDAMAKEP_00784	2.28e-75	-	-	-	S	-	-	-	Protein of unknown function (DUF2568)
PDAMAKEP_00786	1.42e-118	yrdA	-	-	S	-	-	-	DinB family
PDAMAKEP_00787	4.94e-211	aadK	-	-	G	ko:K05593	-	ko00000,ko01000,ko01504	Streptomycin adenylyltransferase
PDAMAKEP_00788	1.21e-245	npd	1.13.12.16	-	S	ko:K00459	ko00910,map00910	ko00000,ko00001,ko01000	COG2070 Dioxygenases related to 2-nitropropane dioxygenase
PDAMAKEP_00789	1.19e-188	murI	5.1.1.3	-	M	ko:K01776	ko00471,ko01100,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
PDAMAKEP_00790	3.21e-305	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PDAMAKEP_00791	5.4e-161	yrpD	-	-	S	-	-	-	Domain of unknown function, YrpD
PDAMAKEP_00793	1.04e-166	zinT	-	-	S	ko:K09815	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
PDAMAKEP_00794	2.75e-68	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PDAMAKEP_00795	2.43e-239	yrpG	-	-	C	-	-	-	Aldo/keto reductase family
PDAMAKEP_00796	9.19e-287	yraO	-	-	C	ko:K03300,ko:K11639	ko02020,map02020	ko00000,ko00001	Citrate transporter
PDAMAKEP_00797	2.97e-210	yraN	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_00798	1.71e-262	yraM	-	-	S	-	-	-	PrpF protein
PDAMAKEP_00799	4.54e-19	csn	3.2.1.132	-	M	ko:K01233	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Aids in the defense against invading fungal pathogens by degrading their cell wall chitosan
PDAMAKEP_00800	9.4e-51	yraL	-	-	S	-	-	-	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PDAMAKEP_00801	2.15e-194	-	-	-	S	-	-	-	Alpha beta hydrolase
PDAMAKEP_00802	6.61e-80	-	-	-	T	-	-	-	sh3 domain protein
PDAMAKEP_00803	1.05e-81	-	-	-	T	-	-	-	sh3 domain protein
PDAMAKEP_00804	1.56e-85	-	-	-	E	-	-	-	Glyoxalase-like domain
PDAMAKEP_00805	1.2e-49	yraG	-	-	-	ko:K06440	-	ko00000	-
PDAMAKEP_00806	2.76e-83	yraF	-	-	M	-	-	-	Spore coat protein
PDAMAKEP_00807	9.1e-284	adhB	1.1.1.1, 1.1.1.284, 1.2.1.46	-	E	ko:K00121,ko:K00148	ko00010,ko00071,ko00350,ko00625,ko00626,ko00680,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko05204,map00010,map00071,map00350,map00625,map00626,map00680,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01200,map01220,map05204	ko00000,ko00001,ko01000	COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases
PDAMAKEP_00808	6.11e-36	yraE	-	-	-	ko:K06440	-	ko00000	-
PDAMAKEP_00809	1.41e-63	yraD	-	-	M	ko:K06439	-	ko00000	Spore coat protein
PDAMAKEP_00810	2.32e-68	adhR	-	-	K	ko:K21745	-	ko00000,ko03000	helix_turn_helix, mercury resistance
PDAMAKEP_00811	1.59e-65	-	-	-	L	-	-	-	Transposase
PDAMAKEP_00812	3.17e-176	-	-	-	L	ko:K07497	-	ko00000	COG2801 Transposase and inactivated derivatives
PDAMAKEP_00813	3.11e-249	adhA	-	-	C	ko:K13979	-	ko00000,ko01000	alcohol dehydrogenase
PDAMAKEP_00814	1.58e-116	yfkM	3.5.1.124	-	S	ko:K05520	-	ko00000,ko01000,ko01002	protease
PDAMAKEP_00815	0.0	sacC	3.2.1.80	-	G	ko:K03332	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 32 family
PDAMAKEP_00816	1.39e-192	levG	-	-	G	ko:K02771,ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	COG3716 Phosphotransferase system, mannose fructose N-acetylgalactosamine-specific component IID
PDAMAKEP_00817	2.79e-166	levF	-	-	G	ko:K02746,ko:K02795,ko:K11196	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	COG3715 Phosphotransferase system, mannose fructose N-acetylgalactosamine-specific component IIC
PDAMAKEP_00818	7.63e-107	ptnA	2.7.1.191, 2.7.1.202	-	G	ko:K02793,ko:K02794,ko:K11195	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system mannose fructose sorbose family
PDAMAKEP_00819	2.66e-97	levD	2.7.1.191, 2.7.1.202	-	G	ko:K02793,ko:K02794,ko:K11194	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
PDAMAKEP_00820	0.0	levR	-	-	K	-	-	-	PTS system fructose IIA component
PDAMAKEP_00821	1.08e-203	levR	-	-	K	-	-	-	PTS system fructose IIA component
PDAMAKEP_00822	0.0	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	COG1113 Gamma-aminobutyrate permease and related permeases
PDAMAKEP_00823	1.88e-135	yrhP	-	-	E	-	-	-	LysE type translocator
PDAMAKEP_00824	5.9e-194	yrhO	-	-	K	-	-	-	Archaeal transcriptional regulator TrmB
PDAMAKEP_00825	9.97e-114	sigV	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PDAMAKEP_00826	7.09e-191	rsiV	-	-	S	-	-	-	Protein of unknown function (DUF3298)
PDAMAKEP_00827	0.0	oatA	-	-	I	-	-	-	Acyltransferase family
PDAMAKEP_00828	4.27e-59	yrhK	-	-	S	-	-	-	YrhK-like protein
PDAMAKEP_00829	0.0	yrhJ	1.14.14.1, 1.6.2.4	-	C	ko:K14338	ko00071,ko00380,ko00627,ko01120,map00071,map00380,map00627,map01120	ko00000,ko00001,ko00199,ko01000	Belongs to the cytochrome P450 family
PDAMAKEP_00830	3.76e-134	-	-	-	K	ko:K22106	-	ko00000,ko03000	Tetracycline repressor, C-terminal all-alpha domain
PDAMAKEP_00831	5.86e-122	yrhH	-	-	Q	-	-	-	methyltransferase
PDAMAKEP_00832	9.39e-08	-	-	-	S	-	-	-	Probable sporulation protein (Bac_small_yrzI)
PDAMAKEP_00834	1.96e-183	yrhG	-	-	P	ko:K21993	-	ko00000,ko02000	Formate nitrite
PDAMAKEP_00835	4.41e-80	yrhF	-	-	S	-	-	-	Uncharacterized conserved protein (DUF2294)
PDAMAKEP_00836	0.0	yjgC	1.17.1.9	-	C	ko:K00123	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	ko00000,ko00001,ko01000	formate dehydrogenase (NAD+) activity
PDAMAKEP_00837	2.46e-102	yrhD	-	-	S	-	-	-	Protein of unknown function (DUF1641)
PDAMAKEP_00838	6.93e-49	yrhC	-	-	S	-	-	-	YrhC-like protein
PDAMAKEP_00839	8.55e-269	mccB	4.4.1.1, 4.4.1.2, 4.4.1.8	-	E	ko:K01760,ko:K17217	ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
PDAMAKEP_00840	7.04e-218	mccA	2.5.1.134, 2.5.1.47	-	E	ko:K01738,ko:K17216	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Cysteine synthase
PDAMAKEP_00841	1.97e-161	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PDAMAKEP_00842	7.23e-155	yrrT	-	-	Q	ko:K17462	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Could be a S-adenosyl-L-methionine-dependent methyltransferase
PDAMAKEP_00843	8.52e-37	yrzA	-	-	S	-	-	-	Protein of unknown function (DUF2536)
PDAMAKEP_00844	1.42e-102	yrrS	-	-	S	-	-	-	Protein of unknown function (DUF1510)
PDAMAKEP_00845	0.0	pbpI	-	-	M	ko:K21468	-	ko00000,ko01011	Penicillin-binding Protein
PDAMAKEP_00846	1.14e-101	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PDAMAKEP_00847	4.51e-148	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Cytidine monophosphokinase
PDAMAKEP_00848	3.8e-312	yrrO	-	-	O	ko:K08303	ko05120,map05120	ko00000,ko00001,ko01000,ko01002	COG0826 Collagenase and related proteases
PDAMAKEP_00849	6.57e-224	yrrN	-	-	O	ko:K08303	ko05120,map05120	ko00000,ko00001,ko01000,ko01002	Peptidase U32
PDAMAKEP_00850	1.4e-154	yrrM	2.1.1.104	-	S	ko:K00588	ko00360,ko00940,ko00941,ko00945,ko01100,ko01110,map00360,map00940,map00941,map00945,map01100,map01110	ko00000,ko00001,ko00002,ko01000	O-methyltransferase
PDAMAKEP_00851	1.24e-240	mltG	-	-	S	ko:K07082	-	ko00000	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PDAMAKEP_00852	2.94e-60	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
PDAMAKEP_00853	5.49e-93	yrrK	-	-	L	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PDAMAKEP_00854	2.22e-55	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
PDAMAKEP_00855	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PDAMAKEP_00856	2.42e-239	yrrI	-	-	S	-	-	-	AI-2E family transporter
PDAMAKEP_00857	9.37e-170	glnQ	-	-	E	ko:K09972,ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1126 ABC-type polar amino acid transport system, ATPase component
PDAMAKEP_00858	1.05e-186	glnH	-	-	ET	ko:K09969,ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 3 family
PDAMAKEP_00859	2.66e-138	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PDAMAKEP_00860	9.26e-140	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PDAMAKEP_00861	5.38e-12	-	-	-	S	-	-	-	Protein of unknown function (DUF3918)
PDAMAKEP_00862	8.4e-42	yrzR	-	-	-	-	-	-	-
PDAMAKEP_00863	2.79e-105	yrrD	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_00864	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PDAMAKEP_00865	1.01e-20	yrrB	-	-	S	-	-	-	COG0457 FOG TPR repeat
PDAMAKEP_00866	1.19e-280	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PDAMAKEP_00867	1.87e-270	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Cysteine desulfurase
PDAMAKEP_00868	8.12e-93	cymR	-	-	K	ko:K17472	-	ko00000,ko03000	Transcriptional regulator
PDAMAKEP_00869	2e-302	rarA	-	-	L	ko:K07478	-	ko00000	COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase
PDAMAKEP_00870	9.32e-255	-	-	-	L	-	-	-	COG3666 Transposase and inactivated derivatives
PDAMAKEP_00871	3.96e-177	yrvM	-	-	H	ko:K22132	-	ko00000,ko03016	COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
PDAMAKEP_00872	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
PDAMAKEP_00873	3e-310	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
PDAMAKEP_00875	0.0	lytH	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	COG3103 SH3 domain protein
PDAMAKEP_00876	3.91e-90	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PDAMAKEP_00877	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PDAMAKEP_00878	1.46e-117	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PDAMAKEP_00879	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
PDAMAKEP_00880	1.07e-64	yrvD	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
PDAMAKEP_00881	6.51e-114	trkA1	-	-	P	ko:K07228	-	ko00000	regulatory, ligand-binding protein related to C-terminal domains of K channels
PDAMAKEP_00882	0.0	secD	-	-	U	ko:K03072,ko:K12257	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
PDAMAKEP_00883	1.93e-65	yrzD	-	-	S	-	-	-	Post-transcriptional regulator
PDAMAKEP_00884	0.0	spoVB	-	-	S	ko:K06409	-	ko00000,ko02000	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PDAMAKEP_00885	1.67e-142	yrbG	-	-	S	-	-	-	membrane
PDAMAKEP_00886	2.95e-96	yrzE	-	-	S	-	-	-	Protein of unknown function (DUF3792)
PDAMAKEP_00887	1.24e-52	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase subunit YajC
PDAMAKEP_00888	4.74e-292	tgt	2.4.2.29	-	F	ko:K00773	-	ko00000,ko01000,ko03016	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PDAMAKEP_00889	2.46e-247	queA	2.4.99.17	-	J	ko:K07568	-	ko00000,ko01000,ko03016	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PDAMAKEP_00890	2.91e-30	yrzS	-	-	S	-	-	-	Protein of unknown function (DUF2905)
PDAMAKEP_00891	3.72e-238	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PDAMAKEP_00892	9.49e-136	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PDAMAKEP_00893	6.46e-121	bofC	-	-	S	ko:K06318	-	ko00000	BofC C-terminal domain
PDAMAKEP_00894	0.0	csbX	-	-	EGP	-	-	-	the major facilitator superfamily
PDAMAKEP_00895	2.77e-248	idhA	1.1.1.18, 1.1.1.369	-	S	ko:K00010	ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130	ko00000,ko00001,ko01000	Oxidoreductase family, NAD-binding Rossmann fold
PDAMAKEP_00896	2.32e-152	yrzF	-	-	T	-	-	-	serine threonine protein kinase
PDAMAKEP_00898	1.47e-66	-	-	-	S	-	-	-	Family of unknown function (DUF5412)
PDAMAKEP_00899	1.32e-121	yrbD	-	-	E	ko:K03310	-	ko00000	Sodium alanine symporter
PDAMAKEP_00900	3.11e-187	yrbD	-	-	E	ko:K03310	-	ko00000	Sodium alanine symporter
PDAMAKEP_00901	8.27e-163	yebC	-	-	K	-	-	-	transcriptional regulatory protein
PDAMAKEP_00902	6.81e-67	-	-	-	S	ko:K06345	-	ko00000	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PDAMAKEP_00903	5.73e-209	safA	-	-	M	ko:K06370	-	ko00000	spore coat assembly protein SafA
PDAMAKEP_00904	3.78e-271	nadA	2.5.1.72	-	H	ko:K03517	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
PDAMAKEP_00905	9.81e-200	nadC	2.4.2.19	-	H	ko:K00767	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NadC ModD family
PDAMAKEP_00906	0.0	nadB	1.4.3.16	-	H	ko:K00278	ko00250,ko00760,ko01100,map00250,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of L-aspartate to iminoaspartate
PDAMAKEP_00907	1.12e-288	nifS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Cysteine desulfurase
PDAMAKEP_00908	5.86e-122	yrxA	-	-	S	ko:K07105	-	ko00000	small molecule binding protein (contains 3H domain)
PDAMAKEP_00909	4.99e-209	pheA	4.2.1.51	-	E	ko:K04518	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Prephenate dehydratase
PDAMAKEP_00910	4.75e-96	pheB	5.4.99.5	-	S	ko:K06209	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the UPF0735 family
PDAMAKEP_00911	5.59e-308	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PDAMAKEP_00912	4.25e-139	spo0B	-	-	T	ko:K06375	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko01000	Sporulation initiation phospho-transferase B, C-terminal
PDAMAKEP_00913	2.7e-61	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
PDAMAKEP_00914	2.66e-74	ysxB	-	-	J	ko:K07584	-	ko00000	ribosomal protein
PDAMAKEP_00915	6.34e-66	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
PDAMAKEP_00916	3.74e-208	spoIVFB	-	-	S	ko:K06402	-	ko00000,ko01000,ko01002	Stage IV sporulation protein
PDAMAKEP_00917	2.6e-187	spoIVFA	-	-	M	ko:K06401	-	ko00000	COG0739 Membrane proteins related to metalloendopeptidases
PDAMAKEP_00918	2.91e-186	minD	-	-	D	ko:K03609	-	ko00000,ko03036,ko04812	Belongs to the ParA family
PDAMAKEP_00919	4.3e-158	minC	-	-	D	ko:K03610	-	ko00000,ko03036,ko04812	Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
PDAMAKEP_00920	8.72e-111	mreD	-	-	M	ko:K03571	-	ko00000,ko03036	shape-determining protein
PDAMAKEP_00921	7.78e-202	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
PDAMAKEP_00922	5.26e-235	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Rod shape-determining protein MreB
PDAMAKEP_00924	6.33e-126	-	-	-	-	-	-	-	-
PDAMAKEP_00926	1.49e-11	-	-	-	-	-	-	-	-
PDAMAKEP_00927	3.21e-305	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PDAMAKEP_00928	1.87e-14	-	-	-	K	-	-	-	Helix-turn-helix domain
PDAMAKEP_00930	2.42e-09	-	-	-	-	-	-	-	-
PDAMAKEP_00932	0.0	-	-	-	L	ko:K21487	-	ko00000,ko01000,ko02048	A nuclease of the HNH/ENDO VII superfamily with conserved LHH
PDAMAKEP_00933	3.18e-67	-	-	-	S	ko:K21488	-	ko00000,ko02048	SMI1-KNR4 cell-wall
PDAMAKEP_00934	6.4e-166	xlyB	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	N-acetylmuramoyl-L-alanine amidase
PDAMAKEP_00935	6.44e-41	xhlB	-	-	S	-	-	-	SPP1 phage holin
PDAMAKEP_00936	4.44e-38	bhlA	-	-	S	-	-	-	BhlA holin family
PDAMAKEP_00939	1.39e-145	-	-	-	S	-	-	-	Domain of unknown function (DUF2479)
PDAMAKEP_00940	0.0	-	-	-	S	-	-	-	Peptidase_G2, IMC autoproteolytic cleavage domain
PDAMAKEP_00941	2.91e-273	acm2	3.2.1.17	-	NU	ko:K01185	-	ko00000,ko01000	Prophage endopeptidase tail
PDAMAKEP_00942	1.02e-143	-	-	-	S	-	-	-	Phage tail protein
PDAMAKEP_00943	0.0	-	-	-	D	-	-	-	phage tail tape measure protein
PDAMAKEP_00946	1.31e-100	-	-	-	S	-	-	-	Phage tail tube protein
PDAMAKEP_00948	9.8e-66	-	-	-	S	-	-	-	Bacteriophage HK97-gp10, putative tail-component
PDAMAKEP_00949	6.1e-51	-	-	-	S	-	-	-	Phage head-tail joining protein
PDAMAKEP_00950	2.07e-52	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
PDAMAKEP_00951	2.99e-34	-	-	-	-	-	-	-	-
PDAMAKEP_00952	6.11e-266	-	-	-	S	-	-	-	capsid protein
PDAMAKEP_00953	2.42e-154	-	-	-	OU	-	-	-	Belongs to the peptidase S14 family
PDAMAKEP_00954	5.1e-301	-	-	-	S	-	-	-	Phage portal protein
PDAMAKEP_00956	0.0	-	-	-	S	-	-	-	Terminase
PDAMAKEP_00957	1.38e-102	-	-	-	L	-	-	-	phage terminase small subunit
PDAMAKEP_00958	9.37e-64	-	-	-	V	ko:K07451	-	ko00000,ko01000,ko02048	HNH endonuclease
PDAMAKEP_00961	4.53e-79	-	-	-	-	-	-	-	-
PDAMAKEP_00963	2.57e-30	-	-	-	S	-	-	-	YopX protein
PDAMAKEP_00965	1.68e-103	-	-	-	-	-	-	-	-
PDAMAKEP_00966	5.43e-122	-	-	-	S	-	-	-	nuclease activity
PDAMAKEP_00967	2.35e-86	-	-	-	-	-	-	-	-
PDAMAKEP_00968	0.0	-	-	-	S	-	-	-	hydrolase activity
PDAMAKEP_00969	5.81e-96	-	-	-	S	-	-	-	Protein of unknown function (DUF669)
PDAMAKEP_00971	4.53e-212	-	-	-	D	-	-	-	AAA domain
PDAMAKEP_00972	1.26e-118	-	-	-	S	-	-	-	DNA protection
PDAMAKEP_00974	3.59e-28	-	-	-	S	-	-	-	Uncharacterized protein YqaH
PDAMAKEP_00977	1.62e-12	-	-	-	K	-	-	-	helix-turn-helix
PDAMAKEP_00978	2.34e-81	-	-	-	S	-	-	-	sequence-specific DNA binding
PDAMAKEP_00979	4.72e-92	-	-	-	S	-	-	-	Pfam:Peptidase_M78
PDAMAKEP_00980	1.14e-287	-	-	-	S	-	-	-	Recombinase
PDAMAKEP_00981	2.75e-86	radC	-	-	E	ko:K03630	-	ko00000	Belongs to the UPF0758 family
PDAMAKEP_00982	1.73e-132	maf	-	-	D	ko:K06287	-	ko00000	septum formation protein Maf
PDAMAKEP_00983	9.19e-206	spoIIB	-	-	S	ko:K06380	-	ko00000	Sporulation related domain
PDAMAKEP_00984	2.58e-108	comC	3.4.23.43	-	NOU	ko:K02236,ko:K02654	-	ko00000,ko00002,ko01000,ko01002,ko02035,ko02044	COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases
PDAMAKEP_00985	5.8e-316	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
PDAMAKEP_00986	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PDAMAKEP_00987	1.53e-35	-	-	-	-	-	-	-	-
PDAMAKEP_00988	8e-251	ysxE	-	-	S	-	-	-	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
PDAMAKEP_00989	0.0	spoVID	-	-	M	ko:K06417	-	ko00000	stage VI sporulation protein D
PDAMAKEP_00990	3.53e-312	hemL	5.4.3.8	-	H	ko:K01845	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Glutamate-1-semialdehyde aminotransferase
PDAMAKEP_00991	3.7e-233	hemB	4.2.1.24	-	H	ko:K01698	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the ALAD family
PDAMAKEP_00992	8.33e-183	hemD	4.2.1.75	-	H	ko:K01719	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Uroporphyrinogen-III synthase
PDAMAKEP_00993	8.91e-220	hemC	2.5.1.61	-	H	ko:K01749	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps
PDAMAKEP_00994	6.56e-187	hemX	-	-	O	ko:K02497	-	ko00000	cytochrome C
PDAMAKEP_00995	6.39e-316	hemA	1.2.1.70	-	H	ko:K02492	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
PDAMAKEP_00996	8.23e-117	ysxD	-	-	-	-	-	-	-
PDAMAKEP_00997	6.25e-138	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
PDAMAKEP_00998	0.0	lon	3.4.21.53	-	O	ko:K01338	ko04112,map04112	ko00000,ko00001,ko01000,ko01002	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
PDAMAKEP_00999	0.0	lonB	3.4.21.53	-	LO	ko:K04076	-	ko00000,ko01000,ko01002	Belongs to the peptidase S16 family
PDAMAKEP_01000	1.15e-296	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PDAMAKEP_01001	2.54e-286	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PDAMAKEP_01002	1.11e-239	ysoA	-	-	H	-	-	-	Tetratricopeptide repeat
PDAMAKEP_01003	7.31e-148	leuD	4.2.1.33, 4.2.1.35	-	E	ko:K01704	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PDAMAKEP_01004	0.0	leuC	4.2.1.33, 4.2.1.35	-	E	ko:K01703	ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PDAMAKEP_01005	7.43e-256	leuB	1.1.1.85	-	CE	ko:K00052	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PDAMAKEP_01006	0.0	leuA	2.3.3.13	-	E	ko:K01649	ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PDAMAKEP_01007	9.59e-245	ilvC	1.1.1.86	-	EH	ko:K00053	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PDAMAKEP_01008	5.05e-110	ilvN	2.2.1.6	-	E	ko:K01653,ko:K16785	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,ko02010,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Acetolactate synthase
PDAMAKEP_01009	0.0	ilvB	2.2.1.6	-	E	ko:K01652,ko:K16787	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,ko02010,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Acetolactate synthase
PDAMAKEP_01011	1.25e-102	ysnE	-	-	K	ko:K03829	-	ko00000,ko01000	acetyltransferase
PDAMAKEP_01012	9.64e-183	ysnF	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_01014	1.65e-118	ysnB	-	-	S	ko:K07095	-	ko00000	Phosphoesterase
PDAMAKEP_01015	3.05e-132	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PDAMAKEP_01016	3.53e-171	rph	2.7.7.56	-	J	ko:K00989	-	ko00000,ko01000,ko03016	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
PDAMAKEP_01017	8.03e-256	gerM	-	-	S	ko:K06298	-	ko00000	COG5401 Spore germination protein
PDAMAKEP_01018	1.15e-196	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
PDAMAKEP_01019	1.6e-98	ysmB	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PDAMAKEP_01020	1.81e-41	gerE	-	-	K	ko:K01994	-	ko00000,ko03000	Transcriptional regulator
PDAMAKEP_01021	2.65e-102	ysmA	-	-	S	ko:K07107	-	ko00000,ko01000	thioesterase
PDAMAKEP_01022	1.15e-189	sdhB	1.3.5.1, 1.3.5.4	-	C	ko:K00240	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	succinate dehydrogenase
PDAMAKEP_01023	0.0	sdhA	1.3.5.1, 1.3.5.4	-	C	ko:K00239	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134	ko00000,ko00001,ko00002,ko01000	succinate dehydrogenase
PDAMAKEP_01024	1.35e-140	sdhC	-	-	C	ko:K00241	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002	succinate dehydrogenase
PDAMAKEP_01025	8.53e-104	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
PDAMAKEP_01026	2.67e-273	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
PDAMAKEP_01027	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PDAMAKEP_01028	1.12e-69	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
PDAMAKEP_01029	0.0	xsa	3.2.1.55	GH51	G	ko:K01209	ko00520,map00520	ko00000,ko00001,ko01000	Alpha-L-arabinofuranosidase C-terminus
PDAMAKEP_01031	1.18e-225	etfA	-	-	C	ko:K03522	-	ko00000,ko04147	Electron transfer flavoprotein
PDAMAKEP_01032	1.74e-177	etfB	-	-	C	ko:K03521	-	ko00000	Electron transfer flavoprotein
PDAMAKEP_01033	1.81e-175	fadB	4.2.1.17	-	I	ko:K13767	ko00071,ko00362,ko01100,ko01120,ko01212,map00071,map00362,map01100,map01120,map01212	ko00000,ko00001,ko00002,ko01000	Belongs to the enoyl-CoA hydratase isomerase family
PDAMAKEP_01034	5.74e-129	fadR	-	-	K	ko:K13770	-	ko00000,ko03000	Transcriptional regulator
PDAMAKEP_01035	0.0	lcfA	6.2.1.3	-	IQ	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
PDAMAKEP_01036	3.76e-89	yshE	-	-	S	ko:K08989	-	ko00000	membrane
PDAMAKEP_01037	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PDAMAKEP_01038	0.0	polX	-	-	L	ko:K02347	-	ko00000,ko03400	COG1796 DNA polymerase IV (family X)
PDAMAKEP_01039	6.3e-111	yshB	-	-	S	-	-	-	membrane protein, required for colicin V production
PDAMAKEP_01040	2.45e-53	zapA	-	-	D	ko:K09888	-	ko00000,ko03036	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PDAMAKEP_01041	1.71e-214	rnhC	3.1.26.4	-	L	ko:K03471	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDAMAKEP_01042	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PDAMAKEP_01043	1.81e-250	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PDAMAKEP_01044	1.22e-168	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDAMAKEP_01045	7.54e-44	sspI	-	-	S	ko:K06426	-	ko00000	Belongs to the SspI family
PDAMAKEP_01046	1.24e-260	cdaR_1	-	-	KT	ko:K02647	-	ko00000,ko03000	regulator
PDAMAKEP_01047	0.0	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	Glycolate oxidase subunit
PDAMAKEP_01048	0.0	glcF	-	-	C	ko:K11473	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001	Glycolate oxidase
PDAMAKEP_01049	1.79e-69	-	4.4.1.5	-	E	ko:K01759	ko00620,map00620	ko00000,ko00001,ko01000	Glyoxalase-like domain
PDAMAKEP_01050	0.0	cstA	-	-	T	ko:K06200	-	ko00000	Carbon starvation protein
PDAMAKEP_01051	0.0	abfA	3.2.1.55	GH51	G	ko:K01209	ko00520,map00520	ko00000,ko00001,ko01000	alpha-L-arabinofuranosidase activity
PDAMAKEP_01052	4.28e-190	araQ	-	-	G	ko:K17236	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	transport system permease
PDAMAKEP_01053	2.76e-218	araP	-	-	G	ko:K17235	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	carbohydrate transport
PDAMAKEP_01054	0.0	araN	-	-	G	ko:K17234	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	carbohydrate transport
PDAMAKEP_01055	1.24e-280	araM	1.1.1.261	-	I	ko:K00096	ko00564,map00564	ko00000,ko00001,ko01000	Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P). The G1P thus generated is probably used for the synthesis of phosphoglycerolipids in Gram-positive bacterial species
PDAMAKEP_01056	7.07e-186	araL	-	-	G	ko:K02101	-	ko00000	Haloacid dehalogenase-like hydrolase
PDAMAKEP_01057	1.7e-170	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
PDAMAKEP_01058	0.0	araB	2.7.1.16	-	C	ko:K00853	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	Belongs to the ribulokinase family
PDAMAKEP_01059	0.0	araA	5.3.1.4	-	G	ko:K01804	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of L-arabinose to L-ribulose
PDAMAKEP_01060	4.56e-241	-	3.2.1.99	GH43	G	ko:K06113	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 43 family
PDAMAKEP_01061	4.35e-262	ysdC	-	-	G	-	-	-	COG1363 Cellulase M and related proteins
PDAMAKEP_01062	1.96e-89	ysdB	-	-	S	-	-	-	Sigma-w pathway protein YsdB
PDAMAKEP_01063	1.27e-59	ysdA	-	-	S	-	-	-	Membrane
PDAMAKEP_01064	3.26e-76	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PDAMAKEP_01065	3.93e-37	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
PDAMAKEP_01066	1.81e-111	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PDAMAKEP_01068	5.34e-150	lrgB	-	-	M	ko:K05339	ko02020,map02020	ko00000,ko00001	Inhibits the expression or activity of extracellular murein hydrolases by interacting, possibly with LrgA, with the holin-like protein CidA. The LrgAB and CidA proteins may affect the proton motive force of the membrane. May be involved in programmed cell death (PCD), possibly triggering PCD in response to antibiotics and environmental stresses
PDAMAKEP_01069	2.08e-85	lrgA	-	-	S	ko:K05338	ko02020,map02020	ko00000,ko00001,ko02000	Inhibits the expression or activity of extracellular murein hydrolases by interacting, possibly with LrgB, with the holin-like protein CidA. The LrgAB and CidA proteins may affect the proton motive force of the membrane. May be involved in programmed cell death (PCD), possibly triggering PCD in response to antibiotics and environmental stresses
PDAMAKEP_01070	3.39e-167	lytT	-	-	T	ko:K07705	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG3279 Response regulator of the LytR AlgR family
PDAMAKEP_01071	0.0	lytS	2.7.13.3	-	T	ko:K07704	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PDAMAKEP_01072	1.15e-188	ysaA	3.1.3.5, 3.8.1.2	-	S	ko:K01560,ko:K07025,ko:K08723	ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120	ko00000,ko00001,ko01000	HAD-hyrolase-like
PDAMAKEP_01073	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PDAMAKEP_01075	2e-204	ytxC	-	-	S	-	-	-	YtxC-like family
PDAMAKEP_01076	3.66e-139	ytxB	-	-	S	-	-	-	SNARE associated Golgi protein
PDAMAKEP_01077	1.05e-221	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
PDAMAKEP_01078	0.0	dnaB	-	-	L	ko:K03346	-	ko00000,ko03032	Membrane attachment protein
PDAMAKEP_01079	2.42e-105	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PDAMAKEP_01080	2.42e-88	speH	4.1.1.50	-	E	ko:K01611	ko00270,ko00330,ko01100,map00270,map00330,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
PDAMAKEP_01081	1.22e-246	gapB	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PDAMAKEP_01082	8.75e-55	ytcD	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_01083	9.37e-21	ytcD	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_01084	7.34e-201	ytbD	-	-	EGP	ko:K19577	-	ko00000,ko02000	-transporter
PDAMAKEP_01085	3.58e-202	ytbE	-	-	S	-	-	-	reductase
PDAMAKEP_01086	8.07e-126	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PDAMAKEP_01087	1.68e-138	ytaF	-	-	P	-	-	-	Probably functions as a manganese efflux pump
PDAMAKEP_01088	1.77e-200	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PDAMAKEP_01089	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PDAMAKEP_01090	0.0	phoR	2.7.13.3	-	T	ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Signal transduction histidine kinase
PDAMAKEP_01091	1.62e-169	phoP	-	-	T	ko:K07658	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PDAMAKEP_01092	1.04e-217	mdh	1.1.1.27, 1.1.1.37	-	C	ko:K00016,ko:K00024	ko00010,ko00020,ko00270,ko00620,ko00630,ko00640,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04922,map00010,map00020,map00270,map00620,map00630,map00640,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200,map04922	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible oxidation of malate to oxaloacetate
PDAMAKEP_01093	9.27e-309	icd	1.1.1.42	-	C	ko:K00031	ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146	br01601,ko00000,ko00001,ko00002,ko01000	isocitrate
PDAMAKEP_01094	1.17e-267	citZ	2.3.3.1	-	C	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Belongs to the citrate synthase family
PDAMAKEP_01095	9.38e-95	ytwI	-	-	S	-	-	-	membrane
PDAMAKEP_01096	2.73e-245	ytvI	-	-	S	-	-	-	sporulation integral membrane protein YtvI
PDAMAKEP_01097	3.85e-81	fxsA	-	-	S	ko:K07113	-	ko00000	COG3030 Protein affecting phage T7 exclusion by the F plasmid
PDAMAKEP_01098	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
PDAMAKEP_01099	1.89e-228	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PDAMAKEP_01100	9.82e-234	accA	2.1.3.15, 6.4.1.2	-	I	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
PDAMAKEP_01101	1.25e-207	accD	2.1.3.15, 6.4.1.2	-	I	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PDAMAKEP_01102	8.53e-287	ytsJ	1.1.1.38	-	C	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	ko00000,ko00001,ko01000	Malate dehydrogenase
PDAMAKEP_01103	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
PDAMAKEP_01104	2.45e-75	ytrH	-	-	S	-	-	-	Sporulation protein YtrH
PDAMAKEP_01105	5.12e-112	ytrI	-	-	-	-	-	-	-
PDAMAKEP_01106	1.15e-39	-	-	-	-	-	-	-	-
PDAMAKEP_01107	1.24e-230	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	COG0618 Exopolyphosphatase-related proteins
PDAMAKEP_01108	2.15e-63	ytpI	-	-	S	-	-	-	YtpI-like protein
PDAMAKEP_01109	1.13e-308	ytoI	-	-	K	-	-	-	transcriptional regulator containing CBS domains
PDAMAKEP_01110	4.14e-202	ytnM	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
PDAMAKEP_01111	2.85e-304	hipO2	-	-	E	ko:K01436,ko:K21613	-	ko00000,ko01000,ko01002	hydrolase activity
PDAMAKEP_01112	3.83e-163	-	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin kinase
PDAMAKEP_01113	0.0	ytnJ	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PDAMAKEP_01114	1.7e-59	ytnI	-	-	O	-	-	-	COG0695 Glutaredoxin and related proteins
PDAMAKEP_01115	3.28e-232	ytmO	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PDAMAKEP_01116	6.61e-183	tcyN	-	-	E	ko:K16960	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1126 ABC-type polar amino acid transport system, ATPase component
PDAMAKEP_01117	4.76e-155	-	-	-	U	ko:K16959	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PDAMAKEP_01118	1.66e-157	ytmL	-	-	P	ko:K16958,ko:K16959	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PDAMAKEP_01119	1.87e-188	tcyK	-	-	M	ko:K16957	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial periplasmic substrate-binding proteins
PDAMAKEP_01120	1.65e-191	-	-	-	ET	ko:K16956,ko:K16957,ko:K16961	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial periplasmic substrate-binding proteins
PDAMAKEP_01121	4.99e-223	ytlI	-	-	K	ko:K21960	-	ko00000,ko03000	LysR substrate binding domain
PDAMAKEP_01122	5.47e-166	ytkL	-	-	S	-	-	-	Belongs to the UPF0173 family
PDAMAKEP_01123	1.98e-182	ytkK	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PDAMAKEP_01125	0.0	argH	4.3.2.1	-	E	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	argininosuccinate lyase
PDAMAKEP_01126	3.03e-297	argG	6.3.4.5	-	E	ko:K01940	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the argininosuccinate synthase family. Type 1 subfamily
PDAMAKEP_01127	2.62e-111	moaB	2.7.7.75	-	H	ko:K03638	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	May be involved in the biosynthesis of molybdopterin
PDAMAKEP_01128	4.69e-281	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PDAMAKEP_01129	2e-219	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	DNA methylase
PDAMAKEP_01130	1.93e-116	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PDAMAKEP_01131	3.03e-91	ytfJ	-	-	S	-	-	-	Sporulation protein YtfJ
PDAMAKEP_01132	6.29e-144	ytfI	-	-	S	-	-	-	Protein of unknown function (DUF2953)
PDAMAKEP_01133	8.23e-112	yteJ	-	-	S	-	-	-	RDD family
PDAMAKEP_01134	2.79e-229	sppA	-	-	OU	ko:K04773	-	ko00000,ko01000,ko01002	signal peptide peptidase SppA
PDAMAKEP_01135	4.65e-187	nadK2	2.7.1.23	-	G	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PDAMAKEP_01136	0.0	ytcJ	-	-	S	-	-	-	amidohydrolase
PDAMAKEP_01137	0.0	ytcI	6.2.1.1	-	I	ko:K01895	ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko01004	COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases
PDAMAKEP_01138	7.14e-39	-	-	-	S	ko:K06418,ko:K06419,ko:K06420	-	ko00000	spore protein
PDAMAKEP_01139	2.55e-288	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PDAMAKEP_01140	1.59e-265	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Cysteine desulfurase
PDAMAKEP_01141	8.23e-305	braB	-	-	E	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
PDAMAKEP_01142	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PDAMAKEP_01143	2.16e-197	hisK	3.1.3.15	-	E	ko:K04486	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	COG1387 Histidinol phosphatase and related hydrolases of the PHP family
PDAMAKEP_01144	1.2e-141	yttP	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_01145	1.95e-114	ytsP	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
PDAMAKEP_01146	5.6e-173	-	-	-	L	-	-	-	Integrase core domain
PDAMAKEP_01147	7.55e-59	orfX1	-	-	L	-	-	-	Transposase
PDAMAKEP_01148	0.0	ytrP	-	-	T	-	-	-	COG2199 FOG GGDEF domain
PDAMAKEP_01149	2.01e-141	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PDAMAKEP_01150	2.88e-186	-	-	-	L	ko:K07497	-	ko00000	Molecular Function DNA binding, Biological Process DNA recombination
PDAMAKEP_01151	3.26e-72	-	-	-	L	-	-	-	transposase activity
PDAMAKEP_01153	2.16e-302	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PDAMAKEP_01154	0.0	acsA	6.2.1.1	-	I	ko:K01895	ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko01004	COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases
PDAMAKEP_01155	2.43e-156	acuA	-	-	K	ko:K04766	-	ko00000,ko01000	Part of the acuABC operon, which is possibly involved in the breakdown of acetoin and butanediol. Acts as an acetyltransferase inactivating acetyl-CoA synthetase AcsA via acetylation at a Lys residue
PDAMAKEP_01156	1.77e-151	acuB	-	-	S	ko:K04767	-	ko00000	Domain in cystathionine beta-synthase and other proteins.
PDAMAKEP_01157	2.65e-292	acuC	-	-	BQ	ko:K04768	-	ko00000	histone deacetylase
PDAMAKEP_01158	1.31e-160	ytxE	-	-	N	ko:K02557	ko02030,ko02040,map02030,map02040	ko00000,ko00001,ko02000,ko02035	Flagellar motor protein
PDAMAKEP_01159	6.84e-187	motP	-	-	N	ko:K02556	ko02020,ko02030,ko02040,map02020,map02030,map02040	ko00000,ko00001,ko02000,ko02035	flagellar motor
PDAMAKEP_01160	1.7e-234	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
PDAMAKEP_01161	7.64e-250	aroA	2.5.1.54, 5.4.99.5	-	E	ko:K03856,ko:K13853	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate
PDAMAKEP_01162	2.23e-71	ytxJ	-	-	O	-	-	-	Protein of unknown function (DUF2847)
PDAMAKEP_01163	3.17e-30	ytxH	-	-	S	-	-	-	COG4980 Gas vesicle protein
PDAMAKEP_01164	1.67e-63	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PDAMAKEP_01165	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
PDAMAKEP_01166	0.0	sftA	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
PDAMAKEP_01167	7.25e-140	ytpR	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PDAMAKEP_01168	1.02e-191	ytpQ	-	-	S	-	-	-	Belongs to the UPF0354 family
PDAMAKEP_01169	3.17e-75	ytpP	-	-	CO	-	-	-	Thioredoxin
PDAMAKEP_01170	4.89e-63	ytoQ	-	-	S	-	-	-	Nucleoside 2-deoxyribosyltransferase YtoQ
PDAMAKEP_01171	4.88e-29	ytoQ	-	-	S	-	-	-	Nucleoside 2-deoxyribosyltransferase YtoQ
PDAMAKEP_01172	3.71e-261	pepA	3.4.11.7	-	G	ko:K01261,ko:K01269	-	ko00000,ko01000,ko01002	COG1363 Cellulase M and related proteins
PDAMAKEP_01173	1.17e-67	ytzB	-	-	S	-	-	-	small secreted protein
PDAMAKEP_01174	0.0	malS	1.1.1.38	-	C	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	ko00000,ko00001,ko01000	Malate dehydrogenase
PDAMAKEP_01175	8.73e-190	ytnP	-	-	S	-	-	-	COG0491 Zn-dependent hydrolases, including glyoxylases
PDAMAKEP_01176	3.07e-156	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PDAMAKEP_01177	9.51e-61	ytzH	-	-	S	-	-	-	YtzH-like protein
PDAMAKEP_01178	3.02e-192	ytmP	-	-	M	-	-	-	Phosphotransferase
PDAMAKEP_01179	0.0	amyX	3.2.1.41	CBM48,GH13	G	ko:K01200	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
PDAMAKEP_01180	2.22e-231	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
PDAMAKEP_01181	9.92e-212	ytlQ	-	-	-	-	-	-	-
PDAMAKEP_01182	1.5e-130	ytlP	3.1.4.58	-	J	ko:K01975	-	ko00000,ko01000,ko03016	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
PDAMAKEP_01183	3e-221	ytkP	2.5.1.47	-	E	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
PDAMAKEP_01184	0.0	ytjP	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Dipeptidase
PDAMAKEP_01185	7.02e-288	pbuO	-	-	S	ko:K06901	-	ko00000,ko02000	permease
PDAMAKEP_01186	4.28e-256	ythQ	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	Bacterial ABC transporter protein EcsB
PDAMAKEP_01187	5.66e-168	ythP	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
PDAMAKEP_01188	4.46e-46	ytzE	-	-	K	-	-	-	COG1349 Transcriptional regulators of sugar metabolism
PDAMAKEP_01189	7.43e-170	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
PDAMAKEP_01190	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PDAMAKEP_01191	1.16e-292	ytfP	-	-	S	ko:K07007	-	ko00000	HI0933-like protein
PDAMAKEP_01192	0.0	opuD	-	-	M	ko:K05020	-	ko00000,ko02000	Belongs to the BCCT transporter (TC 2.A.15) family
PDAMAKEP_01193	2.14e-36	yteV	-	-	S	-	-	-	Sporulation protein Cse60
PDAMAKEP_01194	7.38e-148	yteU	-	-	S	-	-	-	Integral membrane protein
PDAMAKEP_01195	0.0	yteT	-	-	S	-	-	-	Oxidoreductase family, C-terminal alpha/beta domain
PDAMAKEP_01196	2.65e-91	yteS	-	-	G	-	-	-	transport
PDAMAKEP_01197	4.8e-278	yteR	3.2.1.172	GH105	G	ko:K15532	-	ko00000,ko01000	unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
PDAMAKEP_01198	5.35e-220	lplB13	-	-	G	ko:K17319	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG4209 ABC-type polysaccharide transport system, permease component
PDAMAKEP_01199	1.36e-202	ytdP	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_01200	2.74e-276	ytdP	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_01201	0.0	-	-	-	G	ko:K17318	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1653 ABC-type sugar transport system, periplasmic component
PDAMAKEP_01202	6.19e-193	ytcP	-	-	G	ko:K17320	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0395 ABC-type sugar transport system, permease component
PDAMAKEP_01203	2.21e-178	ytbQ	1.1.1.203, 1.1.1.388	-	GM	ko:K18981,ko:K19243	ko00030,ko00053,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00053,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	NAD dependent epimerase/dehydratase family
PDAMAKEP_01204	4.5e-279	bioI	1.14.14.46, 1.14.15.13	-	C	ko:K15468,ko:K16593,ko:K17474	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko00199,ko01000,ko01008	Cytochrome P450
PDAMAKEP_01205	1.86e-243	bioB	2.8.1.6	-	H	ko:K01012	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
PDAMAKEP_01206	6.06e-156	bioD	6.3.3.3	-	H	ko:K01935	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
PDAMAKEP_01207	1.01e-272	bioF	2.3.1.29, 2.3.1.47	-	H	ko:K00639,ko:K00652	ko00260,ko00780,ko01100,map00260,map00780,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide
PDAMAKEP_01208	0.0	bioA	2.6.1.105, 2.6.1.62	-	H	ko:K00833,ko:K19563	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor
PDAMAKEP_01209	4.34e-177	bioW	6.2.1.14	-	H	ko:K01906	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transformation of pimelate into pimeloyl- CoA with concomitant hydrolysis of ATP to AMP
PDAMAKEP_01210	3.38e-221	-	-	-	S	-	-	-	Acetyl xylan esterase (AXE1)
PDAMAKEP_01211	2.08e-240	msmR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
PDAMAKEP_01212	3.51e-310	msmE	-	-	G	ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PDAMAKEP_01213	1.66e-214	amyD	-	-	P	ko:K10118	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PDAMAKEP_01214	3.12e-185	amyC	-	-	P	ko:K10119	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter (permease)
PDAMAKEP_01215	0.0	melA	3.2.1.22	-	G	ko:K07406	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	Family 4 glycosyl hydrolase
PDAMAKEP_01216	1.22e-68	ytwF	-	-	P	-	-	-	Sulfurtransferase
PDAMAKEP_01217	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
PDAMAKEP_01218	3.63e-72	ytvB	-	-	S	-	-	-	Protein of unknown function (DUF4257)
PDAMAKEP_01219	4.6e-179	pfyP	-	-	T	-	-	-	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PDAMAKEP_01220	4.94e-268	yttB	-	-	EGP	-	-	-	Major facilitator superfamily
PDAMAKEP_01221	9.37e-77	yttA	-	-	S	-	-	-	Pfam Transposase IS66
PDAMAKEP_01222	3.21e-305	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PDAMAKEP_01223	0.0	bceB	-	-	V	ko:K11632,ko:K19080	ko01503,ko02010,ko02020,ko05150,map01503,map02010,map02020,map05150	ko00000,ko00001,ko00002,ko01504,ko02000	ABC transporter (permease)
PDAMAKEP_01224	3.14e-178	bceA	-	-	V	ko:K02003,ko:K11631,ko:K19079	ko01503,ko02010,ko02020,ko05150,map01503,map02010,map02020,map05150	ko00000,ko00001,ko00002,ko01504,ko02000	ABC transporter, ATP-binding protein
PDAMAKEP_01225	8.4e-235	bceS	2.7.13.3	-	T	ko:K11629,ko:K19077	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko01504,ko02022	His Kinase A (phosphoacceptor) domain
PDAMAKEP_01226	9.83e-165	graR	-	-	T	ko:K11630,ko:K19078	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01504,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PDAMAKEP_01227	8.41e-298	ytrF	-	-	V	ko:K02004,ko:K16918	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0577 ABC-type antimicrobial peptide transport system, permease component
PDAMAKEP_01228	5.88e-163	ytrE	-	-	V	ko:K16920	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PDAMAKEP_01229	3.57e-188	-	-	-	-	ko:K16919	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	-
PDAMAKEP_01230	8.02e-198	-	-	-	P	ko:K16919	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-2 family transporter protein
PDAMAKEP_01231	5.96e-207	ytrB	-	-	P	ko:K16921	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PDAMAKEP_01232	2.68e-87	ytrA	-	-	K	ko:K07979	-	ko00000,ko03000	GntR family transcriptional regulator
PDAMAKEP_01234	3.64e-55	ytzC	-	-	S	-	-	-	Protein of unknown function (DUF2524)
PDAMAKEP_01235	2.35e-244	ytqA	-	-	S	ko:K07139	-	ko00000	Fe-S oxidoreductase
PDAMAKEP_01236	3.91e-136	ytqB	-	-	J	-	-	-	Putative rRNA methylase
PDAMAKEP_01237	4.81e-276	ytpB	4.2.3.130	-	S	ko:K16188	-	ko00000,ko01000	Tetraprenyl-beta-curcumene synthase
PDAMAKEP_01238	6.67e-192	ytpA	3.1.1.5	-	I	ko:K01048	ko00564,map00564	ko00000,ko00001,ko01000	Alpha beta hydrolase
PDAMAKEP_01239	2.39e-87	ytoA	-	-	S	-	-	-	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
PDAMAKEP_01240	0.0	ytnA	-	-	E	ko:K03293	-	ko00000	COG1113 Gamma-aminobutyrate permease and related permeases
PDAMAKEP_01241	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
PDAMAKEP_01242	3.07e-284	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PDAMAKEP_01243	0.0	pckA	4.1.1.49	-	C	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
PDAMAKEP_01244	5.1e-50	ytmB	-	-	S	-	-	-	Protein of unknown function (DUF2584)
PDAMAKEP_01245	1.06e-187	ytmA	-	-	E	-	-	-	COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases
PDAMAKEP_01246	1.08e-239	ytlA	-	-	P	ko:K02051	-	ko00000,ko00002,ko02000	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components
PDAMAKEP_01247	1.5e-184	ytlC	3.6.3.36	-	P	ko:K02049,ko:K10831,ko:K15555	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
PDAMAKEP_01248	4.43e-182	ytlD	-	-	P	ko:K02050	-	ko00000,ko00002,ko02000	COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component
PDAMAKEP_01249	4.47e-113	ytkD	3.6.1.55	-	L	ko:K03574	-	ko00000,ko01000,ko03400	Belongs to the Nudix hydrolase family
PDAMAKEP_01250	1.25e-78	ytkC	-	-	S	-	-	-	Bacteriophage holin family
PDAMAKEP_01251	7.35e-99	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
PDAMAKEP_01253	4.78e-95	ytkA	-	-	S	-	-	-	YtkA-like
PDAMAKEP_01254	8.36e-113	luxS	4.4.1.21	-	T	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PDAMAKEP_01255	1.27e-133	ytiB	4.2.1.1	-	P	ko:K01673	ko00910,map00910	ko00000,ko00001,ko01000	Reversible hydration of carbon dioxide
PDAMAKEP_01256	1.44e-55	rpmE2	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
PDAMAKEP_01257	6.19e-315	ythA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	oxidase, subunit
PDAMAKEP_01258	5.47e-237	ythB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	COG1294 Cytochrome bd-type quinol oxidase, subunit 2
PDAMAKEP_01259	9.9e-34	-	-	-	S	-	-	-	Domain of Unknown Function (DUF1540)
PDAMAKEP_01260	3.22e-192	mntD	-	-	P	ko:K11709,ko:K19976	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	'COG1108 ABC-type Mn2 Zn2 transport systems, permease components'
PDAMAKEP_01261	8.31e-293	mntC	-	-	P	ko:K11705,ko:K11708,ko:K19976	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1108 ABC-type Mn2 Zn2 transport systems, permease components
PDAMAKEP_01262	1.5e-179	mntB	3.6.3.35	-	P	ko:K02074,ko:K09820,ko:K11710,ko:K19973	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	'COG1121 ABC-type Mn Zn transport systems, ATPase component'
PDAMAKEP_01263	3.23e-218	troA	-	-	P	ko:K11707	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
PDAMAKEP_01264	7.07e-273	menC	4.2.1.113	-	H	ko:K02549	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB)
PDAMAKEP_01265	0.0	menE	6.2.1.26	-	H	ko:K01911	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
PDAMAKEP_01266	3.45e-200	menB	4.1.3.36	-	H	ko:K01661	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PDAMAKEP_01267	1.1e-193	menH	4.2.99.20	-	S	ko:K08680	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC)
PDAMAKEP_01268	0.0	menD	2.2.1.9	-	H	ko:K02551	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
PDAMAKEP_01269	0.0	menF	5.4.4.2	-	HQ	ko:K02552	ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Isochorismate synthase
PDAMAKEP_01270	2.49e-168	yteA	-	-	T	-	-	-	COG1734 DnaK suppressor protein
PDAMAKEP_01271	6.65e-194	ytdA	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Nucleotidyl transferase
PDAMAKEP_01272	6.8e-309	ytcA	1.1.1.22	-	M	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PDAMAKEP_01273	8.31e-226	ytcB	-	-	M	-	-	-	NAD-dependent epimerase dehydratase
PDAMAKEP_01274	8.18e-289	-	-	-	M	ko:K06338	-	ko00000	Glycosyltransferase Family 4
PDAMAKEP_01276	3.3e-261	cotS	-	-	S	ko:K06337	-	ko00000	Seems to be required for the assembly of the CotSA protein in spores
PDAMAKEP_01277	9.69e-274	cotSA	-	-	M	ko:K06338	-	ko00000	Glycosyl transferases group 1
PDAMAKEP_01278	1.06e-259	cotI	-	-	S	ko:K06331	-	ko00000	Spore coat protein
PDAMAKEP_01279	1.97e-101	ytaB	-	-	T	ko:K05770	ko04080,ko04214,ko04979,ko05166,map04080,map04214,map04979,map05166	ko00000,ko00001,ko02000	membrane
PDAMAKEP_01280	0.0	glgP	2.4.1.1	GT35	G	ko:K00688	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	ko00000,ko00001,ko01000	Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PDAMAKEP_01281	0.0	glgA	2.4.1.21	GT5	G	ko:K00703	ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000,ko01003	Synthesizes alpha-1,4-glucan chains using ADP-glucose
PDAMAKEP_01282	6.43e-239	glgD	2.7.7.27	-	G	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000	Glucose-1-phosphate adenylyltransferase, GlgD subunit
PDAMAKEP_01283	8.49e-265	glgC	2.7.7.27	-	G	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PDAMAKEP_01284	0.0	glgB	2.4.1.18	CBM48,GH13	G	ko:K00700	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PDAMAKEP_01306	1.13e-53	-	-	-	S	-	-	-	COG NOG14552 non supervised orthologous group
PDAMAKEP_01307	2.59e-115	thiT	-	-	S	ko:K16789	-	ko00000,ko02000	Thiamine transporter protein (Thia_YuaJ)
PDAMAKEP_01308	4.89e-122	-	-	-	M	-	-	-	FR47-like protein
PDAMAKEP_01309	5.27e-257	yuaG	-	-	S	ko:K07192	ko04910,map04910	ko00000,ko00001,ko03036,ko04131,ko04147	protein conserved in bacteria
PDAMAKEP_01310	1.68e-109	yuaF	-	-	OU	-	-	-	Membrane protein implicated in regulation of membrane protease activity
PDAMAKEP_01311	1.95e-109	yuaE	-	-	S	-	-	-	DinB superfamily
PDAMAKEP_01312	6.78e-136	yuaD	-	-	-	-	-	-	-
PDAMAKEP_01313	4.26e-292	gbsB	1.1.1.1	-	C	ko:K11440	ko00260,ko01100,map00260,map01100	ko00000,ko00001,ko00002,ko01000	alcohol dehydrogenase
PDAMAKEP_01314	0.0	gbsA	1.2.1.8	-	C	ko:K00130	ko00260,ko01100,map00260,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
PDAMAKEP_01315	2.9e-122	yuaC	-	-	K	ko:K22109	-	ko00000,ko03000	Belongs to the GbsR family
PDAMAKEP_01316	5.83e-118	yuaB	-	-	-	-	-	-	-
PDAMAKEP_01317	1.06e-156	ktrA	-	-	P	ko:K03499	-	ko00000,ko02000	COG0569 K transport systems, NAD-binding component
PDAMAKEP_01318	1.07e-300	-	-	-	P	ko:K03498	-	ko00000,ko02000	Potassium
PDAMAKEP_01319	3.31e-52	yubF	-	-	S	-	-	-	yiaA/B two helix domain
PDAMAKEP_01320	1.87e-196	-	-	-	NU	-	-	-	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PDAMAKEP_01321	5.45e-45	yubD	-	-	P	-	-	-	Major Facilitator Superfamily
PDAMAKEP_01322	8.65e-265	yubD	-	-	P	-	-	-	Major Facilitator Superfamily
PDAMAKEP_01323	3.95e-113	cdoA	1.13.11.20	-	S	ko:K00456	ko00270,ko00430,ko01100,map00270,map00430,map01100	ko00000,ko00001,ko01000	Cysteine dioxygenase type I
PDAMAKEP_01325	1.73e-182	uppP	3.6.1.27	-	V	ko:K06153	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PDAMAKEP_01326	8.56e-253	yubA	-	-	S	-	-	-	transporter activity
PDAMAKEP_01327	3.71e-235	yulF	-	-	S	ko:K22230	ko00562,ko01120,map00562,map01120	ko00000,ko00001,ko01000	Oxidoreductase
PDAMAKEP_01328	0.0	rhaA	2.7.1.5, 5.3.1.14	-	G	ko:K00848,ko:K01813	ko00040,ko00051,ko01120,map00040,map00051,map01120	ko00000,ko00001,ko01000	Belongs to the rhamnose isomerase family
PDAMAKEP_01329	8.22e-72	rhaM	5.1.3.32	-	G	ko:K03534	-	ko00000,ko01000	Involved in the anomeric conversion of L-rhamnose
PDAMAKEP_01330	0.0	rhaB	2.7.1.5	-	G	ko:K00848	ko00040,ko00051,ko01120,map00040,map00051,map01120	ko00000,ko00001,ko01000	Involved in the catabolism of L-rhamnose (6-deoxy-L- mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate
PDAMAKEP_01331	1.42e-172	yulB	-	-	K	ko:K02530,ko:K22103	-	ko00000,ko03000	COG1349 Transcriptional regulators of sugar metabolism
PDAMAKEP_01332	0.0	yuxG	-	-	IQ	-	-	-	Class II Aldolase and Adducin N-terminal domain
PDAMAKEP_01333	0.0	mcpA	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis protein
PDAMAKEP_01334	0.0	mcpA	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis protein
PDAMAKEP_01335	5.31e-291	mcpA	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis protein
PDAMAKEP_01336	0.0	mcpB	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis protein
PDAMAKEP_01337	2.51e-180	tgl	2.3.2.13	-	H	ko:K00686	-	ko00000,ko01000	Probably plays a role in the assembly of the spore coat proteins by catalyzing epsilon-(gamma-glutamyl)lysine cross-links
PDAMAKEP_01338	5e-48	-	-	-	-	-	-	-	-
PDAMAKEP_01339	3.63e-95	yugU	-	-	S	-	-	-	Uncharacterised protein family UPF0047
PDAMAKEP_01340	0.0	yugT	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	COG0366 Glycosidases
PDAMAKEP_01341	1.03e-299	yugS	-	-	S	-	-	-	COG1253 Hemolysins and related proteins containing CBS domains
PDAMAKEP_01342	4.8e-150	yugP	-	-	S	ko:K06973	-	ko00000	Zn-dependent protease
PDAMAKEP_01343	2.16e-48	-	-	-	-	-	-	-	-
PDAMAKEP_01344	1.01e-68	mstX	-	-	S	-	-	-	Membrane-integrating protein Mistic
PDAMAKEP_01345	2.06e-232	yugO	-	-	P	ko:K10716	-	ko00000,ko02000	COG1226 Kef-type K transport systems
PDAMAKEP_01346	1.42e-93	yugN	-	-	S	-	-	-	YugN-like family
PDAMAKEP_01348	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
PDAMAKEP_01349	5.56e-291	yugK	-	-	C	ko:K19955	-	ko00000,ko01000	Dehydrogenase
PDAMAKEP_01350	8.16e-287	yugJ	-	-	C	ko:K19955	-	ko00000,ko01000	oxidoreductases, Fe-dependent alcohol dehydrogenase family
PDAMAKEP_01351	2.21e-46	yuzA	-	-	S	ko:K09779	-	ko00000	Domain of unknown function (DUF378)
PDAMAKEP_01352	5e-83	yugI	-	-	J	ko:K07570,ko:K07571	-	ko00000	RNA binding protein (contains ribosomal protein S1 domain)
PDAMAKEP_01353	5.43e-255	yugH	-	-	E	ko:K10907	-	ko00000,ko01000,ko01007	Aminotransferase
PDAMAKEP_01354	6.74e-112	alaR	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_01355	9.89e-201	yugF	-	-	I	-	-	-	Hydrolase
PDAMAKEP_01356	8.84e-52	yugE	-	-	S	-	-	-	Domain of unknown function (DUF1871)
PDAMAKEP_01357	9.44e-128	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
PDAMAKEP_01358	1.92e-136	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
PDAMAKEP_01359	6.13e-296	kinB2	2.7.13.3	-	T	ko:K07697	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PDAMAKEP_01360	4.84e-89	kapB	-	-	G	ko:K06347	ko02020,map02020	ko00000,ko00001	Kinase associated protein B
PDAMAKEP_01361	1.41e-148	kapD	-	-	L	ko:K06348	-	ko00000	the KinA pathway to sporulation
PDAMAKEP_01363	8.9e-242	yuxJ	-	-	EGP	-	-	-	Major facilitator superfamily
PDAMAKEP_01364	0.0	pbpD	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555,ko:K18770	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	Penicillin-binding Protein
PDAMAKEP_01365	1.92e-97	yuxK	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_01366	1.2e-112	yufK	-	-	S	-	-	-	Family of unknown function (DUF5366)
PDAMAKEP_01367	0.0	malK	2.7.13.3	-	T	ko:K11614,ko:K11637,ko:K11691	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Signal transduction histidine kinase regulating citrate malate metabolism
PDAMAKEP_01368	1.33e-161	dcuR	-	-	T	ko:K02475,ko:K11615	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG4565 Response regulator of citrate malate metabolism
PDAMAKEP_01369	5e-253	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC-type transport system, periplasmic component surface lipoprotein
PDAMAKEP_01370	0.0	yufO	3.6.3.17	-	S	ko:K02056	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PDAMAKEP_01371	5.25e-236	yufP	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PDAMAKEP_01372	4.9e-215	yufQ	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PDAMAKEP_01373	3.96e-309	malP	-	-	C	ko:K11616	ko02020,map02020	ko00000,ko00001	COG3493 Na citrate symporter
PDAMAKEP_01374	1.73e-22	-	-	-	-	-	-	-	-
PDAMAKEP_01375	0.0	mrpA	-	-	CP	ko:K05565	-	ko00000,ko02000	COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit
PDAMAKEP_01376	7.66e-91	mrpB	-	-	P	ko:K05566	-	ko00000,ko02000	Subunit B of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PDAMAKEP_01377	3.48e-66	mrpC	-	-	P	ko:K05567	-	ko00000,ko02000	Subunit C of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PDAMAKEP_01378	0.0	mrpD	-	-	CP	ko:K05568	-	ko00000,ko02000	Subunit D of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PDAMAKEP_01379	2.12e-102	mrpE	-	-	P	ko:K05569	-	ko00000,ko02000	Subunit E of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PDAMAKEP_01380	2.61e-50	mrpF	-	-	P	ko:K05570	-	ko00000,ko02000	Subunit F of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PDAMAKEP_01381	8.49e-79	mrpG	-	-	P	ko:K05571	-	ko00000,ko02000	COG1320 Multisubunit Na H antiporter, MnhG subunit
PDAMAKEP_01382	2.72e-83	yuxO	-	-	Q	-	-	-	protein, possibly involved in aromatic compounds catabolism
PDAMAKEP_01383	2.06e-150	comA	-	-	K	ko:K07691	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PDAMAKEP_01384	0.0	comP	2.7.13.3	-	T	ko:K07680	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PDAMAKEP_01386	3.33e-168	comQ	-	-	H	ko:K02251	ko02024,map02024	ko00000,ko00001,ko02044	Belongs to the FPP GGPP synthase family
PDAMAKEP_01387	6.29e-10	-	-	-	S	-	-	-	DegQ (SacQ) family
PDAMAKEP_01388	8.73e-09	yuzC	-	-	-	-	-	-	-
PDAMAKEP_01389	2.92e-298	yuxH	-	-	T	-	-	-	signal transduction protein containing EAL and modified HD-GYP domains
PDAMAKEP_01390	0.0	pncB	6.3.4.21	-	H	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PDAMAKEP_01391	3.82e-133	pncA	-	-	Q	ko:K16788	-	ko00000,ko02000	COG1335 Amidases related to nicotinamidase
PDAMAKEP_01392	5.37e-88	-	-	-	S	-	-	-	Protein of unknown function (DUF1694)
PDAMAKEP_01393	1.34e-51	yueH	-	-	S	-	-	-	YueH-like protein
PDAMAKEP_01394	1.19e-41	yueG	-	-	S	ko:K06299	-	ko00000	Spore germination protein gerPA/gerPF
PDAMAKEP_01395	3.18e-243	yueF	-	-	S	-	-	-	transporter activity
PDAMAKEP_01396	6.59e-92	-	-	-	S	-	-	-	Protein of unknown function (DUF2283)
PDAMAKEP_01397	4.86e-32	-	-	-	S	-	-	-	Protein of unknown function (DUF2642)
PDAMAKEP_01398	3.85e-125	yueE	-	-	S	ko:K06950	-	ko00000	phosphohydrolase
PDAMAKEP_01399	1.96e-167	yueD	1.1.1.320	-	IQ	ko:K16216	-	ko00000,ko01000	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PDAMAKEP_01400	4.37e-97	yueC	-	-	S	-	-	-	Family of unknown function (DUF5383)
PDAMAKEP_01401	0.0	yueB	-	-	S	-	-	-	type VII secretion protein EsaA
PDAMAKEP_01402	0.0	essC	-	-	D	ko:K03466	-	ko00000,ko03036	COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
PDAMAKEP_01403	5.18e-270	essB	-	-	S	-	-	-	WXG100 protein secretion system (Wss), protein YukC
PDAMAKEP_01404	1.93e-54	yukD	-	-	S	-	-	-	WXG100 protein secretion system (Wss), protein YukD
PDAMAKEP_01405	3.93e-60	yukE	-	-	S	-	-	-	Belongs to the WXG100 family
PDAMAKEP_01406	9.9e-291	yukF	-	-	QT	-	-	-	Transcriptional regulator
PDAMAKEP_01407	4.02e-262	ald	1.4.1.1	-	E	ko:K00259	ko00250,ko00430,ko01100,map00250,map00430,map01100	ko00000,ko00001,ko01000	Belongs to the AlaDH PNT family
PDAMAKEP_01408	1.2e-168	yukJ	-	-	S	-	-	-	Uncharacterized conserved protein (DUF2278)
PDAMAKEP_01409	4.08e-47	mbtH	-	-	S	ko:K05375	ko00261,ko01130,map00261,map01130	ko00000,ko00001,ko00002	MbtH-like protein
PDAMAKEP_01410	0.0	dhbF	-	-	Q	ko:K04780	ko01053,map01053	ko00000,ko00001,ko01008	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PDAMAKEP_01411	1.23e-225	dhbB	3.3.2.1, 6.3.2.14	-	Q	ko:K01252	ko01053,ko01110,ko01130,map01053,map01110,map01130	ko00000,ko00001,ko01000,ko01008	Isochorismatase family
PDAMAKEP_01412	0.0	entE	2.7.7.58, 6.3.2.14	-	Q	ko:K02363,ko:K04783	ko01053,ko01110,ko01130,map01053,map01110,map01130	ko00000,ko00001,ko01000,ko01008	2,3-dihydroxybenzoate-AMP ligase
PDAMAKEP_01413	3.34e-287	dhbC	5.4.4.2	-	HQ	ko:K02361	ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Isochorismate synthase
PDAMAKEP_01414	4.59e-175	dhbA	1.3.1.28	-	IQ	ko:K00216	ko01053,ko01110,ko01130,map01053,map01110,map01130	ko00000,ko00001,ko01000	Belongs to the short-chain dehydrogenases reductases (SDR) family
PDAMAKEP_01415	8.94e-213	eSD	-	-	S	ko:K07017	-	ko00000	Putative esterase
PDAMAKEP_01416	2.36e-157	yuiH	-	-	S	-	-	-	Oxidoreductase molybdopterin binding domain
PDAMAKEP_01417	8.33e-125	bioY	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Biotin biosynthesis protein
PDAMAKEP_01418	2.46e-277	yuiF	-	-	S	ko:K07084	-	ko00000,ko02000	antiporter
PDAMAKEP_01419	0.0	pepA	3.4.11.1	-	E	ko:K01255	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
PDAMAKEP_01420	7.09e-101	yuiD	-	-	S	ko:K09775	-	ko00000	protein conserved in bacteria
PDAMAKEP_01421	1.28e-148	yuiC	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_01422	1.14e-45	yuiB	-	-	S	-	-	-	Putative membrane protein
PDAMAKEP_01423	6.9e-300	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
PDAMAKEP_01424	5.51e-239	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	reductase
PDAMAKEP_01426	1.29e-234	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PDAMAKEP_01427	6.43e-146	paiB	-	-	K	ko:K07734	-	ko00000,ko03000	Putative FMN-binding domain
PDAMAKEP_01428	1.39e-115	paiA	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PDAMAKEP_01429	6.81e-83	erpA	-	-	S	ko:K13628	-	ko00000,ko03016	Belongs to the HesB IscA family
PDAMAKEP_01430	3.9e-208	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PDAMAKEP_01431	1.71e-267	yutK	-	-	F	ko:K03317	-	ko00000	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
PDAMAKEP_01432	1.74e-52	yuzB	-	-	S	-	-	-	Belongs to the UPF0349 family
PDAMAKEP_01433	1.12e-253	yutJ	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
PDAMAKEP_01434	5.44e-74	yuzD	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_01435	1.26e-47	yutI	-	-	O	-	-	-	COG0694 Thioredoxin-like proteins and domains
PDAMAKEP_01436	0.0	yuxL	3.4.19.1	-	EU	ko:K01303	-	ko00000,ko01000,ko01002	peptidase
PDAMAKEP_01437	2.99e-220	thrB	2.7.1.39	-	E	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PDAMAKEP_01438	5.64e-252	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
PDAMAKEP_01439	1.67e-307	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
PDAMAKEP_01440	8.97e-253	yutH	-	-	S	-	-	-	Spore coat protein
PDAMAKEP_01441	2.26e-101	yutG	3.1.3.27	-	I	ko:K01095	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	COG1267 Phosphatidylglycerophosphatase A and related proteins
PDAMAKEP_01442	3.03e-182	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PDAMAKEP_01443	2.38e-99	yutE	-	-	S	-	-	-	Protein of unknown function DUF86
PDAMAKEP_01444	2.17e-61	yutD	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_01445	2.71e-144	yutC	-	-	S	-	-	-	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PDAMAKEP_01446	1.37e-215	lipA	2.8.1.8	-	H	ko:K03644	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
PDAMAKEP_01447	7.63e-252	lytH	-	-	M	ko:K21472	-	ko00000,ko01000,ko01002,ko01011	Peptidase, M23
PDAMAKEP_01448	2.54e-168	yunB	-	-	S	-	-	-	Sporulation protein YunB (Spo_YunB)
PDAMAKEP_01449	1.33e-59	yunC	-	-	S	-	-	-	Domain of unknown function (DUF1805)
PDAMAKEP_01450	0.0	yunD	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PDAMAKEP_01451	2.65e-180	yunE	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
PDAMAKEP_01452	4.26e-220	yunF	-	-	S	-	-	-	Protein of unknown function DUF72
PDAMAKEP_01453	1.85e-61	yunG	-	-	-	-	-	-	-
PDAMAKEP_01454	0.0	allB	3.5.2.5	-	F	ko:K01466	ko00230,ko01100,ko01120,map00230,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of allantoin (5- ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring
PDAMAKEP_01455	0.0	pucR	-	-	QT	ko:K09684	-	ko00000,ko03000	COG2508 Regulator of polyketide synthase expression
PDAMAKEP_01456	1.15e-297	pbuX	-	-	F	ko:K03458,ko:K16169,ko:K16170	-	ko00000,ko02000	Permease family
PDAMAKEP_01457	1.76e-280	pbuX	-	-	F	ko:K16169,ko:K16170	-	ko00000,ko02000	xanthine
PDAMAKEP_01458	0.0	-	1.7.3.3, 4.1.1.97	-	Q	ko:K16838	ko00230,ko00232,ko01100,ko01120,map00230,map00232,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of uric acid to 5- hydroxyisourate, which is further processed to form (S)-allantoin
PDAMAKEP_01459	1.21e-71	pucM	3.5.2.17	-	S	ko:K07127	ko00230,ko01100,ko01120,map00230,map01100,map01120	ko00000,ko00001,ko00002,ko01000,ko02000	Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily
PDAMAKEP_01460	0.000154	-	-	-	S	-	-	-	Protein of unknown function (Tiny_TM_bacill)
PDAMAKEP_01461	1.99e-121	-	1.17.1.4, 1.2.5.3	-	C	ko:K00087,ko:K03518	ko00230,ko01100,ko01120,map00230,map01100,map01120	ko00000,ko00001,ko00002,ko01000	COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs
PDAMAKEP_01462	0.0	pucD	1.17.1.4	-	C	ko:K00087	ko00230,ko01100,ko01120,map00230,map01100,map01120	ko00000,ko00001,ko00002,ko01000	COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs
PDAMAKEP_01463	2.12e-188	pucC	1.17.1.4, 1.2.5.3	-	C	ko:K00087,ko:K03519	ko00230,ko01100,ko01120,map00230,map01100,map01120	ko00000,ko00001,ko00002,ko01000	COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM CutM homologs
PDAMAKEP_01464	3.58e-142	pucB	1.17.1.4, 2.7.7.76	-	S	ko:K00087,ko:K07141	ko00230,ko00790,ko01100,ko01120,map00230,map00790,map01100,map01120	ko00000,ko00001,ko00002,ko01000	MobA-like NTP transferase domain
PDAMAKEP_01465	1.58e-237	pucA	1.17.1.4	-	O	ko:K00087,ko:K07402	ko00230,ko01100,ko01120,map00230,map01100,map01120	ko00000,ko00001,ko00002,ko01000	COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
PDAMAKEP_01467	2.34e-303	pucG	2.6.1.112, 2.6.1.44, 2.6.1.45, 2.6.1.51	-	E	ko:K00830,ko:K00839	ko00230,ko00250,ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko04146,map00230,map00250,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map04146	ko00000,ko00001,ko00002,ko01000,ko01007	COG0075 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase
PDAMAKEP_01468	3.39e-294	pucF	3.5.3.9	-	E	ko:K02083	ko00230,ko01120,map00230,map01120	ko00000,ko00001,ko01000,ko01002	COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases
PDAMAKEP_01469	1.21e-213	bsn	-	-	L	-	-	-	Ribonuclease
PDAMAKEP_01470	1.09e-30	azlD	-	-	S	-	-	-	Branched-chain amino acid transport protein (AzlD)
PDAMAKEP_01471	1.3e-93	-	-	-	E	-	-	-	AzlC protein
PDAMAKEP_01472	2.24e-184	gntR9	-	-	K	-	-	-	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PDAMAKEP_01473	2.47e-47	-	-	-	L	-	-	-	COG3666 Transposase and inactivated derivatives
PDAMAKEP_01474	1.46e-82	-	-	-	L	-	-	-	COG3666 Transposase and inactivated derivatives
PDAMAKEP_01476	6.48e-170	megL	4.4.1.11	-	E	ko:K01761	ko00270,ko00450,map00270,map00450	ko00000,ko00001,ko01000	methionine gamma-lyase
PDAMAKEP_01477	3.17e-176	-	-	-	L	ko:K07497	-	ko00000	COG2801 Transposase and inactivated derivatives
PDAMAKEP_01478	1.59e-65	-	-	-	L	-	-	-	Transposase
PDAMAKEP_01479	5.04e-33	megL	4.4.1.11	-	E	ko:K01761	ko00270,ko00450,map00270,map00450	ko00000,ko00001,ko01000	methionine gamma-lyase
PDAMAKEP_01480	1.3e-27	-	-	-	I	-	-	-	Fatty acid desaturase
PDAMAKEP_01481	4.23e-100	-	-	-	I	-	-	-	Fatty acid desaturase
PDAMAKEP_01482	0.000162	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
PDAMAKEP_01483	3.78e-250	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PDAMAKEP_01484	2.92e-173	frlR1	-	-	K	ko:K03710,ko:K10711	-	ko00000,ko03000	UTRA
PDAMAKEP_01485	1.05e-187	-	2.7.1.218	-	G	ko:K10710	-	ko00000,ko01000	pfkB family carbohydrate kinase
PDAMAKEP_01486	1.12e-304	yurO	-	-	G	ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1653 ABC-type sugar transport system, periplasmic component
PDAMAKEP_01487	1.51e-234	frlB	-	-	M	ko:K10708	-	ko00000,ko01000	Catalyzes the conversion of a range of fructosamine 6- phosphates to glucose 6-phosphate and a free amino acid
PDAMAKEP_01488	1.2e-87	yurQ	-	-	L	-	-	-	COG0322 Nuclease subunit of the excinuclease complex
PDAMAKEP_01489	1.36e-266	yurR	1.4.5.1	-	E	ko:K00285	ko00360,map00360	ko00000,ko00001,ko01000	COG0665 Glycine D-amino acid oxidases (deaminating)
PDAMAKEP_01491	3.35e-56	-	-	-	-	-	-	-	-
PDAMAKEP_01492	3.26e-72	-	-	-	L	-	-	-	transposase activity
PDAMAKEP_01493	2.88e-186	-	-	-	L	ko:K07497	-	ko00000	Molecular Function DNA binding, Biological Process DNA recombination
PDAMAKEP_01494	2.51e-13	-	-	-	-	-	-	-	-
PDAMAKEP_01499	6.14e-142	xlyA	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	n-acetylmuramoyl-L-alanine amidase
PDAMAKEP_01500	1.32e-76	-	-	-	S	-	-	-	Bacteriophage holin family
PDAMAKEP_01502	4.07e-38	-	-	-	-	-	-	-	-
PDAMAKEP_01503	7.88e-155	-	-	-	S	-	-	-	Domain of unknown function (DUF2479)
PDAMAKEP_01504	0.0	-	-	-	S	-	-	-	Peptidase_G2, IMC autoproteolytic cleavage domain
PDAMAKEP_01505	2.42e-309	acm2	3.2.1.17	-	NU	ko:K01185	-	ko00000,ko01000	Prophage endopeptidase tail
PDAMAKEP_01506	1.69e-142	-	-	-	S	-	-	-	Phage tail protein
PDAMAKEP_01507	0.0	-	-	-	S	-	-	-	peptidoglycan catabolic process
PDAMAKEP_01508	2.88e-16	-	-	-	-	-	-	-	-
PDAMAKEP_01509	3.18e-36	-	-	-	-	-	-	-	-
PDAMAKEP_01510	9.75e-79	-	-	-	-	-	-	-	-
PDAMAKEP_01511	7.04e-41	-	-	-	-	-	-	-	-
PDAMAKEP_01512	2.66e-63	-	-	-	S	-	-	-	Bacteriophage HK97-gp10, putative tail-component
PDAMAKEP_01513	5.25e-34	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
PDAMAKEP_01514	1.73e-38	-	-	-	S	-	-	-	peptidoglycan catabolic process
PDAMAKEP_01515	2.93e-09	-	-	-	S	-	-	-	peptidoglycan catabolic process
PDAMAKEP_01516	2.53e-229	-	-	-	S	-	-	-	capsid protein
PDAMAKEP_01517	3.81e-134	-	-	-	S	-	-	-	peptidase activity
PDAMAKEP_01518	4.09e-274	-	-	-	S	-	-	-	Phage portal protein
PDAMAKEP_01519	6.29e-13	-	-	-	-	-	-	-	-
PDAMAKEP_01520	3.55e-280	-	-	-	S	-	-	-	Phage Terminase
PDAMAKEP_01521	3.5e-90	-	-	-	S	-	-	-	Phage terminase, small subunit
PDAMAKEP_01522	3.27e-27	-	-	-	-	-	-	-	-
PDAMAKEP_01523	6.71e-85	-	-	-	S	-	-	-	HNH endonuclease
PDAMAKEP_01526	1.63e-39	-	-	-	-	-	-	-	-
PDAMAKEP_01528	1.71e-77	-	-	-	L	-	-	-	Phage integrase family
PDAMAKEP_01529	3.08e-67	-	-	-	M	-	-	-	ArpU family transcriptional regulator
PDAMAKEP_01530	1.75e-58	xpf	-	-	K	ko:K03088	-	ko00000,ko03021	COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
PDAMAKEP_01533	1.6e-61	-	-	-	S	-	-	-	dUTPase
PDAMAKEP_01535	4.95e-129	-	-	-	H	-	-	-	C-5 cytosine-specific DNA methylase
PDAMAKEP_01540	2.78e-08	-	-	-	-	-	-	-	-
PDAMAKEP_01543	4.86e-10	-	-	-	-	-	-	-	-
PDAMAKEP_01545	2.15e-21	-	-	-	L	ko:K02315	-	ko00000,ko03032	IstB-like ATP binding protein
PDAMAKEP_01546	4.88e-116	-	-	-	L	-	-	-	Conserved phage C-terminus (Phg_2220_C)
PDAMAKEP_01548	2.37e-23	-	-	-	-	-	-	-	-
PDAMAKEP_01549	8.83e-61	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PDAMAKEP_01552	1.33e-151	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PDAMAKEP_01553	0.0	sufB	-	-	O	ko:K07033,ko:K09014	-	ko00000	FeS cluster assembly
PDAMAKEP_01554	6.26e-101	nifU	-	-	C	ko:K04488	-	ko00000	COG0822 NifU homolog involved in Fe-S cluster formation
PDAMAKEP_01555	3.83e-297	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PDAMAKEP_01556	6.1e-312	sufD	-	-	O	ko:K07033,ko:K09015	-	ko00000	assembly protein SufD
PDAMAKEP_01557	3.82e-183	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component
PDAMAKEP_01558	6.44e-62	yurZ	-	-	S	-	-	-	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
PDAMAKEP_01559	8.33e-189	metQ	-	-	P	ko:K02072,ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the NlpA lipoprotein family
PDAMAKEP_01560	6.5e-126	metI	-	-	P	ko:K02069,ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG2011 ABC-type metal ion transport system, permease component
PDAMAKEP_01561	2.15e-236	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PDAMAKEP_01562	1.53e-74	yusD	-	-	S	-	-	-	SCP-2 sterol transfer family
PDAMAKEP_01563	6.7e-72	yusE	-	-	CO	-	-	-	Thioredoxin
PDAMAKEP_01564	7.32e-95	yusF	-	-	L	ko:K07476	-	ko00000	COG1658 Small primase-like proteins (Toprim domain)
PDAMAKEP_01565	7.34e-54	yusG	-	-	S	-	-	-	Protein of unknown function (DUF2553)
PDAMAKEP_01566	5.91e-85	gcvH	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate
PDAMAKEP_01567	1.01e-83	yusI	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	Belongs to the ArsC family
PDAMAKEP_01568	0.0	fadE	1.3.8.1	-	I	ko:K00248	ko00071,ko00280,ko00650,ko01100,ko01110,ko01120,ko01200,ko01212,map00071,map00280,map00650,map01100,map01110,map01120,map01200,map01212	ko00000,ko00001,ko01000	acyl-CoA dehydrogenase
PDAMAKEP_01569	7.74e-278	fadA	2.3.1.16	-	I	ko:K00632	ko00071,ko00280,ko00281,ko00362,ko00592,ko00642,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00362,map00592,map00642,map01100,map01110,map01120,map01130,map01212	ko00000,ko00001,ko00002,ko01000	Belongs to the thiolase family
PDAMAKEP_01570	0.0	fadN	1.1.1.35	-	I	ko:K07516	ko00071,ko00362,ko00650,ko01100,ko01120,ko01200,ko01212,map00071,map00362,map00650,map01100,map01120,map01200,map01212	ko00000,ko00001,ko00002,ko01000	3-hydroxyacyl-CoA dehydrogenase
PDAMAKEP_01571	1.11e-13	-	-	-	S	-	-	-	YuzL-like protein
PDAMAKEP_01572	8.15e-210	fadM	-	-	E	ko:K00318	ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130	ko00000,ko00001,ko01000	Proline dehydrogenase
PDAMAKEP_01573	2.23e-54	-	-	-	-	-	-	-	-
PDAMAKEP_01574	2.29e-69	yusN	-	-	M	-	-	-	Coat F domain
PDAMAKEP_01575	6.35e-98	yusO	-	-	K	-	-	-	Iron dependent repressor, N-terminal DNA binding domain
PDAMAKEP_01576	0.0	yusP	-	-	P	-	-	-	Major facilitator superfamily
PDAMAKEP_01577	1.7e-84	yusQ	-	-	S	-	-	-	Tautomerase enzyme
PDAMAKEP_01578	3.34e-136	yusR	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the short-chain dehydrogenases reductases (SDR) family
PDAMAKEP_01579	8.42e-204	gltR	-	-	K	ko:K21959	-	ko00000,ko03000	LysR substrate binding domain
PDAMAKEP_01580	1.05e-63	yusU	-	-	S	-	-	-	Protein of unknown function (DUF2573)
PDAMAKEP_01581	2.51e-195	yusV	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
PDAMAKEP_01582	1.72e-88	-	-	-	S	-	-	-	YusW-like protein
PDAMAKEP_01583	0.0	pepF2	-	-	E	-	-	-	COG1164 Oligoendopeptidase F
PDAMAKEP_01584	3.16e-196	yusZ	-	-	IQ	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
PDAMAKEP_01585	2.15e-104	fri	-	-	P	ko:K04047	-	ko00000,ko03036	Ferritin-like domain
PDAMAKEP_01586	3.08e-302	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PDAMAKEP_01587	2.23e-164	cssR	-	-	T	ko:K07770	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PDAMAKEP_01588	0.0	cssS	2.7.13.3	-	T	ko:K07650	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PDAMAKEP_01589	2.07e-202	yuxN	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_01590	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PDAMAKEP_01591	2.6e-33	-	-	-	S	-	-	-	Protein of unknown function (DUF3970)
PDAMAKEP_01592	0.0	gerAA	-	-	EG	ko:K06288,ko:K06291,ko:K06310	-	ko00000	Spore germination protein
PDAMAKEP_01593	1.13e-250	gerAB	-	-	E	ko:K06289,ko:K06292	-	ko00000,ko02000	Spore germination protein
PDAMAKEP_01594	8.74e-243	gerAC	-	-	S	ko:K06290,ko:K06293,ko:K06312	-	ko00000	Spore germination B3/ GerAC like, C-terminal
PDAMAKEP_01595	1.1e-139	vraR	-	-	KT	ko:K07694,ko:K11618	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PDAMAKEP_01596	2.35e-245	vraS	2.7.13.3	-	T	ko:K07681,ko:K11617	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PDAMAKEP_01597	7.65e-164	-	-	-	S	ko:K11622	ko02020,map02020	ko00000,ko00001	Cell wall-active antibiotics response 4TMS YvqF
PDAMAKEP_01598	6.68e-171	liaG	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
PDAMAKEP_01599	2.44e-143	liaH	-	-	KT	ko:K03969,ko:K11620	ko02020,map02020	ko00000,ko00001,ko00002	COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription
PDAMAKEP_01600	1.07e-82	liaI	-	-	S	ko:K11619	ko02020,map02020	ko00000,ko00001,ko00002	membrane
PDAMAKEP_01601	4.58e-288	yvqJ	-	-	EGP	-	-	-	COG0477 Permeases of the major facilitator superfamily
PDAMAKEP_01602	6.47e-130	yvqK	2.5.1.17	-	S	ko:K00798	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Adenosyltransferase
PDAMAKEP_01603	5.43e-311	yvrA	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components
PDAMAKEP_01604	1.56e-235	btuC	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PDAMAKEP_01605	2.98e-218	btuF	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component
PDAMAKEP_01606	1.18e-178	yvrD	-	-	IQ	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
PDAMAKEP_01607	7.64e-219	yvrE	-	-	G	ko:K14274	ko00040,map00040	ko00000,ko00001,ko01000	SMP-30/Gluconolaconase/LRE-like region
PDAMAKEP_01608	0.0	yvrG	-	-	T	-	-	-	Histidine kinase
PDAMAKEP_01609	3.16e-170	yvrH	-	-	T	ko:K02483	-	ko00000,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PDAMAKEP_01610	5.07e-32	-	-	-	-	-	-	-	-
PDAMAKEP_01611	4.55e-124	yvrI	-	-	K	ko:K03093	-	ko00000,ko03021	RNA polymerase
PDAMAKEP_01612	6.98e-26	-	-	-	S	-	-	-	YvrJ protein family
PDAMAKEP_01613	2.17e-290	oxdC	4.1.1.2	-	G	ko:K01569	ko00630,ko01100,map00630,map01100	ko00000,ko00001,ko01000	Oxalate decarboxylase
PDAMAKEP_01614	8.13e-85	yvrL	-	-	S	-	-	-	Regulatory protein YrvL
PDAMAKEP_01615	4.57e-270	yvrN	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	COG0577 ABC-type antimicrobial peptide transport system, permease component
PDAMAKEP_01616	4.64e-159	yvrO	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PDAMAKEP_01617	1.4e-228	-	-	-	M	ko:K02005	-	ko00000	Efflux transporter rnd family, mfp subunit
PDAMAKEP_01618	2.92e-191	fhuC	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
PDAMAKEP_01619	1.12e-224	fhuG	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PDAMAKEP_01620	2.72e-233	fhuB	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PDAMAKEP_01621	4.45e-225	fhuD	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PDAMAKEP_01622	0.0	yvsH	-	-	E	ko:K03294,ko:K03758	-	ko00000,ko02000	Arginine ornithine antiporter
PDAMAKEP_01623	9.37e-23	-	-	-	S	ko:K06427	-	ko00000	Small spore protein J (Spore_SspJ)
PDAMAKEP_01624	6.83e-109	yvsG	-	-	S	ko:K07038	-	ko00000	LexA-binding, inner membrane-associated putative hydrolase
PDAMAKEP_01625	0.0	yvgJ	-	-	M	ko:K01138	-	ko00000,ko01000	Belongs to the LTA synthase family
PDAMAKEP_01626	3.61e-214	yvgK	-	-	P	ko:K07219	-	ko00000	COG1910 Periplasmic molybdate-binding protein domain
PDAMAKEP_01627	8.94e-177	modA	-	-	P	ko:K02020	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0725 ABC-type molybdate transport system, periplasmic component
PDAMAKEP_01628	2.89e-152	modB	-	-	P	ko:K02018	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG4149 ABC-type molybdate transport system, permease component
PDAMAKEP_01629	1.77e-200	yvgN	-	-	S	-	-	-	reductase
PDAMAKEP_01630	7.97e-113	yvgO	-	-	-	-	-	-	-
PDAMAKEP_01631	0.0	yvgP	-	-	P	ko:K03316	-	ko00000	COG0025 NhaP-type Na H and K H antiporters
PDAMAKEP_01632	0.0	cysI	1.8.1.2, 1.8.7.1	-	P	ko:K00381,ko:K00392	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate
PDAMAKEP_01633	0.0	cysJ	1.8.1.2	-	P	ko:K00380	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
PDAMAKEP_01634	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
PDAMAKEP_01635	3.88e-140	yvgT	-	-	S	-	-	-	membrane
PDAMAKEP_01636	1.15e-94	bdbC	-	-	O	ko:K03611	-	ko00000,ko03110	Required for disulfide bond formation in some proteins
PDAMAKEP_01637	1.71e-137	bdbD	-	-	O	-	-	-	Thioredoxin
PDAMAKEP_01638	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	COG2217 Cation transport ATPase
PDAMAKEP_01639	0.0	copA	3.6.3.54	-	P	ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
PDAMAKEP_01640	3.02e-40	copZ	-	-	P	ko:K07213	ko04978,map04978	ko00000,ko00001	Copper resistance protein CopZ
PDAMAKEP_01641	6.89e-65	csoR	-	-	S	ko:K21600	-	ko00000,ko03000	transcriptional
PDAMAKEP_01642	1.71e-248	yvaA	1.1.1.371	-	S	ko:K16044	ko00562,ko01120,map00562,map01120	ko00000,ko00001,ko01000	Oxidoreductase
PDAMAKEP_01643	2.08e-153	azoR	-	-	I	ko:K01118	-	ko00000,ko01000	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PDAMAKEP_01644	0.0	-	-	-	S	-	-	-	Fusaric acid resistance protein-like
PDAMAKEP_01645	8.22e-97	yvaD	-	-	S	-	-	-	Family of unknown function (DUF5360)
PDAMAKEP_01646	2.04e-70	yvaE	-	-	P	ko:K03297	-	ko00000,ko02000	Small Multidrug Resistance protein
PDAMAKEP_01647	5.77e-127	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PDAMAKEP_01648	3.96e-182	yvaG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the short-chain dehydrogenases reductases (SDR) family
PDAMAKEP_01650	2.4e-107	smpB	-	-	O	ko:K03664	-	ko00000	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
PDAMAKEP_01651	0.0	rnr	-	-	K	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PDAMAKEP_01652	2.42e-183	est	3.1.1.1	-	S	ko:K03928	-	ko00000,ko01000	Carboxylesterase
PDAMAKEP_01653	1.87e-35	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase subunit SecG
PDAMAKEP_01654	2.84e-194	yvaM	1.11.1.10	-	S	ko:K00433	-	ko00000,ko01000	Serine aminopeptidase, S33
PDAMAKEP_01655	4.9e-48	yvzC	-	-	K	-	-	-	transcriptional
PDAMAKEP_01656	5.17e-91	yvaO	-	-	K	ko:K22299	-	ko00000,ko03000	transcriptional
PDAMAKEP_01657	9.82e-92	yvaO	-	-	K	ko:K22299	-	ko00000,ko03000	Cro/C1-type HTH DNA-binding domain
PDAMAKEP_01658	2.23e-71	yvaP	-	-	K	-	-	-	transcriptional
PDAMAKEP_01659	0.0	yvaQ	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis protein
PDAMAKEP_01660	4.37e-142	opuCD	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1174 ABC-type proline glycine betaine transport systems, permease component
PDAMAKEP_01661	2.37e-220	opuCC	-	-	M	ko:K05845	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1732 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PDAMAKEP_01662	2.57e-141	opuCB	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1174 ABC-type proline glycine betaine transport systems, permease component
PDAMAKEP_01663	3.34e-267	opuCA	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1125 ABC-type proline glycine betaine transport systems, ATPase components
PDAMAKEP_01664	1.9e-121	yvbF	-	-	K	ko:K22301	-	ko00000,ko03000	Belongs to the GbsR family
PDAMAKEP_01665	2.75e-11	-	-	-	S	-	-	-	Sporulation delaying protein SdpA
PDAMAKEP_01666	1.13e-222	-	-	-	-	-	-	-	-
PDAMAKEP_01668	8.32e-133	yvaZ	-	-	S	-	-	-	Immunity protein that provides protection for the cell against the toxic effects of SDP, its own SdpC-derived killing factor, and that functions as a receptor signal transduction protein as well. Once SDP accumulates in the extracellular milieu, SdpI binds to SDP, causing sequestration of SdpR at the bacterial membrane
PDAMAKEP_01669	9.63e-60	sdpR	-	-	K	-	-	-	transcriptional
PDAMAKEP_01670	1.03e-146	opuCD	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1174 ABC-type proline glycine betaine transport systems, permease component
PDAMAKEP_01671	5e-221	opuCC	-	-	M	ko:K05845	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1732 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PDAMAKEP_01672	5.63e-145	opuCB	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1174 ABC-type proline glycine betaine transport systems, permease component
PDAMAKEP_01673	5.58e-270	opuCA	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1125 ABC-type proline glycine betaine transport systems, ATPase components
PDAMAKEP_01674	8.29e-129	yvbF	-	-	K	ko:K22301	-	ko00000,ko03000	Belongs to the GbsR family
PDAMAKEP_01675	1.32e-133	yvbG	-	-	U	ko:K05595	-	ko00000,ko02000	UPF0056 membrane protein
PDAMAKEP_01676	2.96e-145	yvbH	-	-	S	-	-	-	YvbH-like oligomerisation region
PDAMAKEP_01677	6.54e-156	yvbI	-	-	M	-	-	-	Membrane
PDAMAKEP_01678	0.0	tcaA	-	-	S	ko:K21463	-	ko00000	response to antibiotic
PDAMAKEP_01679	1.18e-97	yvbK	-	-	K	-	-	-	acetyltransferase
PDAMAKEP_01680	1.38e-309	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PDAMAKEP_01681	0.0	gpmI	5.4.2.12	-	G	ko:K15633	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of 2-phosphoglycerate and
PDAMAKEP_01682	2.12e-176	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PDAMAKEP_01683	1.97e-277	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
PDAMAKEP_01684	8.12e-238	gapA	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PDAMAKEP_01685	4.01e-236	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain
PDAMAKEP_01686	0.0	araE	-	-	U	ko:K02100,ko:K06609,ko:K08139	ko04113,map04113	ko00000,ko00001,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PDAMAKEP_01687	1.51e-258	araR	-	-	K	ko:K02103	-	ko00000,ko03000	transcriptional
PDAMAKEP_01688	1.04e-245	yvbT	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PDAMAKEP_01689	2.72e-203	yvbU	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_01690	5.59e-198	yvbV	-	-	EG	-	-	-	EamA-like transporter family
PDAMAKEP_01691	2.88e-306	yvbW	-	-	E	ko:K03293	-	ko00000	COG1113 Gamma-aminobutyrate permease and related permeases
PDAMAKEP_01692	3.65e-250	-	-	-	S	-	-	-	Glycosyl hydrolase
PDAMAKEP_01693	2.4e-171	lutC	-	-	S	ko:K00782	-	ko00000	Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source
PDAMAKEP_01694	0.0	lutB	-	-	C	ko:K18929	-	ko00000	Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate
PDAMAKEP_01695	1.06e-173	lutA	-	-	C	ko:K18928	-	ko00000	Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source
PDAMAKEP_01696	4.79e-39	desR	-	-	T	ko:K02479,ko:K07693	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PDAMAKEP_01697	4.7e-197	rsbQ	-	-	S	ko:K19707	-	ko00000,ko03021	Alpha/beta hydrolase family
PDAMAKEP_01698	2.4e-262	-	3.1.3.3	-	T	ko:K07315	-	ko00000,ko01000,ko03021	response regulator
PDAMAKEP_01699	0.0	ganB	3.2.1.89	-	G	ko:K01224	-	ko00000,ko01000	arabinogalactan
PDAMAKEP_01700	0.0	lacA	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	beta-galactosidase
PDAMAKEP_01701	3.82e-194	malG	-	-	P	ko:K15772	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	transport
PDAMAKEP_01702	5.29e-301	malC	-	-	P	ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1175 ABC-type sugar transport systems, permease components
PDAMAKEP_01703	1.32e-291	cycB	-	-	G	ko:K02027,ko:K15770,ko:K17237	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG2182 Maltose-binding periplasmic proteins domains
PDAMAKEP_01704	6.42e-237	lacR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
PDAMAKEP_01705	1.18e-146	yvfI	-	-	K	ko:K05799	-	ko00000,ko03000	COG2186 Transcriptional regulators
PDAMAKEP_01706	0.0	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
PDAMAKEP_01707	2.75e-303	rpoN	-	-	K	ko:K03092	ko02020,ko05111,map02020,map05111	ko00000,ko00001,ko03021	COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog
PDAMAKEP_01708	5.69e-44	yvfG	-	-	S	-	-	-	YvfG protein
PDAMAKEP_01709	1.15e-235	epsO	-	-	GM	ko:K19431	-	ko00000,ko01000	Exopolysaccharide biosynthesis protein
PDAMAKEP_01710	1.01e-276	epsN	-	-	E	ko:K19430	-	ko00000,ko01000	Belongs to the DegT DnrJ EryC1 family
PDAMAKEP_01711	6.15e-79	epsM	-	-	GM	ko:K19429	-	ko00000,ko01000	COG0110 Acetyltransferase (isoleucine patch superfamily)
PDAMAKEP_01712	6.7e-141	epsL	-	-	M	ko:K13012,ko:K19428	-	ko00000,ko01000,ko01005	COG2148 Sugar transferases involved in lipopolysaccharide synthesis
PDAMAKEP_01713	0.0	epsK	-	-	S	ko:K19418	-	ko00000,ko02000	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PDAMAKEP_01714	1.53e-242	epsJ	-	GT2	S	ko:K19427	-	ko00000,ko01000	COG0463 Glycosyltransferases involved in cell wall biogenesis
PDAMAKEP_01715	4.68e-260	epsI	-	-	GM	ko:K19426	-	ko00000,ko01000	pyruvyl transferase
PDAMAKEP_01716	3.35e-246	epsH	-	GT2	S	ko:K19425	-	ko00000,ko01000,ko01003	Glycosyltransferase like family 2
PDAMAKEP_01717	2.95e-263	epsG	-	-	S	ko:K19419	-	ko00000,ko02000	EpsG family
PDAMAKEP_01718	2.06e-277	epsF	-	GT4	M	ko:K19424	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
PDAMAKEP_01719	2.16e-202	epsE	-	GT2	M	ko:K19423	-	ko00000,ko01000,ko01003	COG0463 Glycosyltransferases involved in cell wall biogenesis
PDAMAKEP_01720	3.85e-282	epsD	-	GT4	M	ko:K19422	-	ko00000,ko01000	Glycosyl transferase 4-like
PDAMAKEP_01721	0.0	capD	-	-	GM	ko:K19421	-	ko00000	Polysaccharide biosynthesis protein
PDAMAKEP_01722	3.23e-149	ywqD	2.7.10.2	-	D	ko:K00903	-	ko00000,ko01000,ko01001	COG0489 ATPases involved in chromosome partitioning
PDAMAKEP_01723	1.32e-156	epsA	-	-	M	ko:K19420	-	ko00000	biosynthesis protein
PDAMAKEP_01724	2.07e-97	-	-	-	K	ko:K19417	-	ko00000,ko03000	transcriptional
PDAMAKEP_01725	0.0	pnbA	-	CE10	I	ko:K03929	-	ko00000,ko01000	Belongs to the type-B carboxylesterase lipase family
PDAMAKEP_01727	3.13e-119	padC	-	-	Q	ko:K13727	-	ko00000,ko01000	Phenolic acid decarboxylase
PDAMAKEP_01728	1.23e-93	-	-	-	S	-	-	-	Protein of unknown function (DUF3237)
PDAMAKEP_01729	4.15e-161	racX	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
PDAMAKEP_01730	0.0	pbpE	-	-	V	-	-	-	Beta-lactamase
PDAMAKEP_01731	0.0	sacB	2.4.1.10, 2.4.1.9	GH68	M	ko:K00692,ko:K20811	ko00500,ko01100,ko02020,map00500,map01100,map02020	ko00000,ko00001,ko01000,ko01003	levansucrase activity
PDAMAKEP_01732	0.0	sacC3	3.2.1.65	GH32	G	ko:K01212	ko00500,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 32 family
PDAMAKEP_01733	3.24e-151	ybeC	-	-	E	-	-	-	amino acid
PDAMAKEP_01734	4.78e-173	ybeC	-	-	E	-	-	-	amino acid
PDAMAKEP_01735	4.76e-137	yvdT_1	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_01736	1.05e-66	yvdS	-	-	P	ko:K18924	-	ko00000,ko00002,ko02000	Small Multidrug Resistance protein
PDAMAKEP_01737	4.21e-66	yvdR	-	-	P	ko:K11741	-	ko00000,ko02000	Small Multidrug Resistance protein
PDAMAKEP_01738	3.19e-95	yvdQ	-	-	S	-	-	-	Protein of unknown function (DUF3231)
PDAMAKEP_01740	8.17e-135	clpP	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PDAMAKEP_01741	7.59e-147	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
PDAMAKEP_01742	0.0	malL	3.2.1.10	GH13	G	ko:K01182	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	COG0366 Glycosidases
PDAMAKEP_01743	0.0	yvdK	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Glycoside hydrolase, family 65
PDAMAKEP_01744	5.63e-197	malA	-	-	S	-	-	-	Protein of unknown function (DUF1189)
PDAMAKEP_01745	6.56e-188	malD	-	-	P	ko:K15772	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	transport
PDAMAKEP_01746	1.43e-309	malC	-	-	P	ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1175 ABC-type sugar transport systems, permease components
PDAMAKEP_01747	9.87e-301	mdxE	-	-	G	ko:K02027,ko:K15770,ko:K17237	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG2182 Maltose-binding periplasmic proteins domains
PDAMAKEP_01748	0.0	nplT	3.2.1.133, 3.2.1.135, 3.2.1.54	GH13	G	ko:K01208	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, N-terminal ig-like domain
PDAMAKEP_01749	6.55e-223	yvdE	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_01750	3.11e-136	yvdD	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the LOG family
PDAMAKEP_01751	7.84e-71	yvdC	-	-	S	-	-	-	MazG nucleotide pyrophosphohydrolase domain
PDAMAKEP_01752	0.0	yvdB	-	-	P	ko:K03321	-	ko00000,ko02000	COG0659 Sulfate permease and related transporters (MFS superfamily)
PDAMAKEP_01753	8.79e-136	yvdA	4.2.1.1	-	P	ko:K01673	ko00910,map00910	ko00000,ko00001,ko01000	Reversible hydration of carbon dioxide
PDAMAKEP_01754	2.32e-234	yvcT	1.1.1.215, 1.1.1.26, 1.1.1.79, 1.1.1.81	-	CH	ko:K00015,ko:K00090	ko00030,ko00260,ko00620,ko00630,ko01100,ko01110,ko01120,map00030,map00260,map00620,map00630,map01100,map01110,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDAMAKEP_01755	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter (permease)
PDAMAKEP_01756	2.58e-180	yxdL_2	-	-	V	ko:K02003,ko:K11635	ko02020,map02020	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PDAMAKEP_01757	4.61e-250	yvcQ	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
PDAMAKEP_01758	4.67e-172	yvcP	-	-	T	ko:K02483,ko:K11634	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PDAMAKEP_01759	7.42e-29	-	-	-	-	-	-	-	-
PDAMAKEP_01760	6.59e-182	yvcN	2.3.1.118	-	Q	ko:K00675	-	ko00000,ko01000	Belongs to the arylamine N-acetyltransferase family
PDAMAKEP_01761	3.92e-50	crh	-	-	G	ko:K11184	-	ko00000	Phosphocarrier protein Chr
PDAMAKEP_01762	3.63e-220	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
PDAMAKEP_01763	6.72e-227	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
PDAMAKEP_01764	2.09e-213	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
PDAMAKEP_01765	2.39e-117	yvcI	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes
PDAMAKEP_01766	1.18e-225	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PDAMAKEP_01767	4.38e-184	spl	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	protein conserved in bacteria
PDAMAKEP_01768	0.0	yvcD	-	-	S	-	-	-	COG0457 FOG TPR repeat
PDAMAKEP_01769	0.0	lmrA	3.6.3.44	-	V	ko:K02021,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter
PDAMAKEP_01771	0.0	-	-	-	-	-	-	-	-
PDAMAKEP_01772	3.02e-170	-	-	-	-	-	-	-	-
PDAMAKEP_01773	3.05e-145	hisI	3.5.4.19, 3.6.1.31	-	E	ko:K01496,ko:K11755	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	belongs to the PRA-CH family
PDAMAKEP_01774	3.97e-176	hisF	-	-	E	ko:K02500	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PDAMAKEP_01775	6.55e-167	hisA	5.3.1.16	-	E	ko:K01814	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PDAMAKEP_01776	1.2e-148	hisH	-	-	E	ko:K02501	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PDAMAKEP_01777	2.87e-138	hisB	4.2.1.19	-	E	ko:K01693	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	imidazoleglycerol-phosphate dehydratase
PDAMAKEP_01778	4.08e-289	hisD	1.1.1.23	-	E	ko:K00013	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PDAMAKEP_01779	1.06e-147	hisG	2.4.2.17	-	E	ko:K00765,ko:K02502	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
PDAMAKEP_01780	6.92e-281	hisZ	-	-	E	ko:K02502	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
PDAMAKEP_01781	2.49e-178	yvpB	-	-	NU	-	-	-	protein conserved in bacteria
PDAMAKEP_01782	3.15e-153	-	4.2.2.10, 4.2.2.2	-	G	ko:K19551	ko00040,map00040	ko00000,ko00001,ko01000	Pectate lyase
PDAMAKEP_01783	5.94e-118	yvoF	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	COG0110 Acetyltransferase (isoleucine patch superfamily)
PDAMAKEP_01784	1.06e-153	ppaX	3.6.1.1	-	S	ko:K06019	ko00190,map00190	ko00000,ko00001,ko01000	Hydrolyzes pyrophosphate formed during P-Ser-HPr dephosphorylation by HPrK P. Might play a role in controlling the intracellular pyrophosphate pool
PDAMAKEP_01785	3.72e-211	yvoD	-	-	P	-	-	-	COG0370 Fe2 transport system protein B
PDAMAKEP_01786	3.18e-195	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PDAMAKEP_01787	3.62e-217	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Also phosphorylates dephosphorylates the HPr-like catabolite repression protein crh on a specific serine residue. Therefore, by controlling the phosphorylation state of HPr and crh, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PDAMAKEP_01788	1.02e-280	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
PDAMAKEP_01789	2.03e-164	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PDAMAKEP_01790	1.5e-171	yvoA	-	-	K	ko:K03710	-	ko00000,ko03000	transcriptional
PDAMAKEP_01791	0.0	yvnB	-	-	Q	-	-	-	Calcineurin-like phosphoesterase
PDAMAKEP_01792	4.9e-111	yvmB	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PDAMAKEP_01793	4.26e-272	yvmA	-	-	EGP	-	-	-	Major Facilitator Superfamily
PDAMAKEP_01794	3.8e-66	yvlD	-	-	S	ko:K08972	-	ko00000	Membrane
PDAMAKEP_01795	1.5e-36	yvlC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain
PDAMAKEP_01796	4.54e-218	yvlB	-	-	S	-	-	-	Putative adhesin
PDAMAKEP_01797	8.09e-65	yvlA	-	-	-	-	-	-	-
PDAMAKEP_01798	4.54e-45	yvkN	-	-	-	-	-	-	-
PDAMAKEP_01799	4.93e-64	hag	-	-	N	ko:K02406	ko02020,ko02040,ko04621,ko04626,ko05132,ko05134,map02020,map02040,map04621,map04626,map05132,map05134	ko00000,ko00001,ko02035	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
PDAMAKEP_01800	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PDAMAKEP_01801	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PDAMAKEP_01802	2.54e-42	csbA	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_01803	0.0	yvkC	2.7.9.2	-	GT	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Phosphotransferase
PDAMAKEP_01805	4.77e-130	yvkB	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_01806	5.47e-298	yvkA	-	-	P	-	-	-	-transporter
PDAMAKEP_01807	3.86e-281	minJ	-	-	O	-	-	-	COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PDAMAKEP_01808	2.69e-95	swrA	-	-	S	-	-	-	Swarming motility protein
PDAMAKEP_01809	0.0	ctpB	3.4.21.102	-	M	ko:K03797	-	ko00000,ko01000,ko01002	Belongs to the peptidase S41A family
PDAMAKEP_01810	4.47e-198	ftsX	-	-	D	ko:K09811	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03036	Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
PDAMAKEP_01811	2.13e-159	ftsE	-	-	D	ko:K09812	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03036	cell division ATP-binding protein FtsE
PDAMAKEP_01812	3.78e-74	cccB	-	-	C	ko:K12263,ko:K13300	-	ko00000	COG2010 Cytochrome c, mono- and diheme variants
PDAMAKEP_01813	6.5e-185	yvjA	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2179)
PDAMAKEP_01814	2e-232	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PDAMAKEP_01815	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PDAMAKEP_01816	1.73e-132	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PDAMAKEP_01817	2.46e-67	-	-	-	-	-	-	-	-
PDAMAKEP_01818	8.69e-09	fliT	-	-	S	ko:K02423	ko02040,map02040	ko00000,ko00001,ko02035	bacterial-type flagellum organization
PDAMAKEP_01819	6.02e-90	fliS	-	-	N	ko:K02422	ko02040,map02040	ko00000,ko00001,ko02035	flagellar protein FliS
PDAMAKEP_01820	2.21e-313	fliD	-	-	N	ko:K02407	ko02040,map02040	ko00000,ko00001,ko02035	morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
PDAMAKEP_01821	9.77e-71	flaG	-	-	N	ko:K06603	-	ko00000,ko02035	flagellar protein FlaG
PDAMAKEP_01822	7.45e-148	hag	-	-	N	ko:K02406	ko02020,ko02040,ko04621,ko04626,ko05132,ko05134,map02020,map02040,map04621,map04626,map05132,map05134	ko00000,ko00001,ko02035	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
PDAMAKEP_01823	4.29e-40	csrA	-	-	T	ko:K03563	ko02020,ko02025,ko02026,ko05111,map02020,map02025,map02026,map05111	ko00000,ko00001,ko03019	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
PDAMAKEP_01824	1.23e-96	fliW	-	-	S	ko:K13626	-	ko00000,ko02035	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
PDAMAKEP_01825	1.7e-92	yviE	-	-	-	-	-	-	-
PDAMAKEP_01826	3.8e-197	flgL	-	-	N	ko:K02397	ko02040,map02040	ko00000,ko00001,ko02035	Belongs to the bacterial flagellin family
PDAMAKEP_01827	0.0	flgK	-	-	N	ko:K02396	ko02040,map02040	ko00000,ko00001,ko02035	flagellar hook-associated protein
PDAMAKEP_01828	1e-101	yvyG	-	-	NOU	-	-	-	FlgN protein
PDAMAKEP_01829	4.32e-53	flgM	-	-	KNU	ko:K02398	ko02020,ko02025,ko02026,ko02040,map02020,map02025,map02026,map02040	ko00000,ko00001,ko02035	Negative regulator of flagellin synthesis
PDAMAKEP_01830	5.26e-96	yvyF	-	-	S	-	-	-	flagellar protein
PDAMAKEP_01831	1.25e-159	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Phosphoribosyl transferase domain
PDAMAKEP_01832	1.26e-61	comFB	-	-	S	ko:K02241	-	ko00000,ko00002,ko02044	Late competence development protein ComFB
PDAMAKEP_01833	0.0	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	COG4098 Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
PDAMAKEP_01834	2.15e-199	degV	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_01835	7.16e-163	degU	-	-	KT	ko:K02479,ko:K07692	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PDAMAKEP_01836	2.94e-247	degS	2.7.13.3	-	T	ko:K07777	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Member of the two-component regulatory system DegS DegU, which plays an important role in the transition growth phase
PDAMAKEP_01837	2.41e-155	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	Domain of unknown function (DUF1949)
PDAMAKEP_01838	2.68e-223	yvhJ	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_01839	1.42e-229	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase UDP-N-acetylglucosamine-1-phosphate transferase
PDAMAKEP_01840	9.34e-294	tuaH	-	-	M	ko:K16699	-	ko00000,ko01000,ko01003	Teichuronic acid biosynthesis glycosyltransferase tuaH
PDAMAKEP_01841	8.42e-187	tuaG	-	GT2	M	ko:K16698	-	ko00000,ko01000,ko01003	Glycosyltransferase like family 2
PDAMAKEP_01842	2.02e-147	tuaF	-	-	M	ko:K16706	-	ko00000	protein involved in exopolysaccharide biosynthesis
PDAMAKEP_01843	0.0	tuaE	-	-	M	ko:K16705	-	ko00000	Teichuronic acid biosynthesis protein
PDAMAKEP_01844	0.0	tuaD	1.1.1.22	-	M	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PDAMAKEP_01845	1.63e-278	tuaC	-	GT4	GM	ko:K16697	-	ko00000,ko01000,ko01003	Teichuronic acid
PDAMAKEP_01846	2.93e-315	tuaB	-	-	S	ko:K03328,ko:K16694,ko:K16695	-	ko00000,ko02000	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PDAMAKEP_01847	1.49e-143	tuaA	-	-	M	-	-	-	COG2148 Sugar transferases involved in lipopolysaccharide synthesis
PDAMAKEP_01848	0.0	lytC	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	n-acetylmuramoyl-L-alanine amidase
PDAMAKEP_01849	0.0	lytB	-	-	D	-	-	-	Stage II sporulation protein
PDAMAKEP_01850	3.26e-50	-	-	-	-	-	-	-	-
PDAMAKEP_01851	1.13e-218	lytR	-	-	K	-	-	-	May catalyze the final step in cell wall teichoic acid biosynthesis, the transfer of the anionic cell wall polymers (APs) from their lipid-linked precursor to the cell wall peptidoglycan (PG)
PDAMAKEP_01852	2.58e-275	mnaA	5.1.3.14	-	M	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PDAMAKEP_01853	2.53e-208	gtaB	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
PDAMAKEP_01854	0.0	-	-	-	M	-	-	-	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PDAMAKEP_01855	0.0	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PDAMAKEP_01856	5.43e-05	-	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Cytidylyltransferase-like
PDAMAKEP_01857	2.13e-127	gtaB	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
PDAMAKEP_01858	0.0	tagH	3.6.3.40	-	GM	ko:K09693	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
PDAMAKEP_01859	2.06e-194	tagG	-	-	GM	ko:K09692	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transport permease protein
PDAMAKEP_01860	0.0	tagF	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
PDAMAKEP_01861	0.0	tagE	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferase 1 domain A
PDAMAKEP_01862	3.82e-91	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Cytidylyltransferase
PDAMAKEP_01863	1.9e-185	tagA	2.4.1.187	GT26	M	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PDAMAKEP_01864	3.8e-273	tagB	2.7.8.44	-	M	ko:K21285	-	ko00000,ko01000	glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
PDAMAKEP_01865	0.0	-	-	-	-	-	-	-	-
PDAMAKEP_01866	0.0	lytD	3.2.1.96	-	G	ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PDAMAKEP_01867	2.15e-237	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
PDAMAKEP_01868	0.0	gerBA	-	-	EG	ko:K06288,ko:K06291,ko:K06310	-	ko00000	Spore germination protein
PDAMAKEP_01869	4.73e-245	gerAB	-	-	E	ko:K06289,ko:K06292	-	ko00000,ko02000	Spore germination protein
PDAMAKEP_01870	1.25e-263	gerBC	-	-	S	ko:K06290,ko:K06293,ko:K06312	-	ko00000	Spore germination protein
PDAMAKEP_01871	1.06e-313	ywtG	-	-	U	ko:K02100,ko:K06609,ko:K08139	ko04113,map04113	ko00000,ko00001,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PDAMAKEP_01872	2.11e-222	ywtF_2	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_01873	2.95e-204	ywtE	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolases of the HAD superfamily
PDAMAKEP_01874	5.6e-173	-	-	-	L	-	-	-	Integrase core domain
PDAMAKEP_01875	7.55e-59	orfX1	-	-	L	-	-	-	Transposase
PDAMAKEP_01876	4.73e-306	pgdS	-	-	M	-	-	-	COG0791 Cell wall-associated hydrolases (invasion-associated proteins)
PDAMAKEP_01877	2.29e-29	ywtC	-	-	-	-	-	-	-
PDAMAKEP_01878	4.46e-276	capA	-	-	M	ko:K07282	-	ko00000	enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
PDAMAKEP_01879	8.44e-91	capC	-	-	S	ko:K22116	-	ko00000	biosynthesis protein
PDAMAKEP_01880	1.46e-283	capB	-	-	M	ko:K01932	-	ko00000,ko01000	COG0769 UDP-N-acetylmuramyl tripeptide synthase
PDAMAKEP_01881	9.35e-228	rbsR	-	-	K	ko:K02529	-	ko00000,ko03000	transcriptional
PDAMAKEP_01882	2.62e-206	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PDAMAKEP_01883	4.61e-84	rbsD	5.4.99.62	-	G	ko:K06726	ko02010,map02010	ko00000,ko00001,ko01000	Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PDAMAKEP_01884	0.0	rbsA	3.6.3.17	-	G	ko:K10441	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system
PDAMAKEP_01885	1.12e-201	rbsC	-	-	G	ko:K10440	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PDAMAKEP_01886	9.04e-204	rbsB	-	-	G	ko:K10439	ko02010,ko02030,map02010,map02030	ko00000,ko00001,ko00002,ko02000	COG1879 ABC-type sugar transport system, periplasmic component
PDAMAKEP_01887	1.14e-118	batE	-	-	T	-	-	-	Sh3 type 3 domain protein
PDAMAKEP_01888	3.75e-63	ywsA	-	-	S	-	-	-	Protein of unknown function (DUF3892)
PDAMAKEP_01889	6.17e-126	ywrO	-	-	S	-	-	-	NADPH-quinone reductase (modulator of drug activity B)
PDAMAKEP_01890	2.5e-185	budA	4.1.1.5	-	H	ko:K01575	ko00650,ko00660,map00650,map00660	ko00000,ko00001,ko01000	Alpha-acetolactate decarboxylase
PDAMAKEP_01891	0.0	alsS	2.2.1.6	-	EH	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
PDAMAKEP_01892	3.36e-218	alsR	-	-	K	-	-	-	LysR substrate binding domain
PDAMAKEP_01893	9.45e-196	ywrK	-	-	P	ko:K03893	-	ko00000,ko02000	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
PDAMAKEP_01894	1.06e-162	ywrJ	-	-	-	-	-	-	-
PDAMAKEP_01895	3.29e-114	cotB	-	-	-	ko:K06325	-	ko00000	-
PDAMAKEP_01896	3.12e-29	cotB	-	-	-	ko:K06325	-	ko00000	-
PDAMAKEP_01897	1.2e-264	cotH	-	-	M	ko:K06330	-	ko00000	Spore Coat
PDAMAKEP_01898	5.01e-18	-	-	-	-	-	-	-	-
PDAMAKEP_01899	3.43e-140	ywrF	-	-	S	-	-	-	COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
PDAMAKEP_01900	3.8e-69	-	-	-	S	-	-	-	Domain of unknown function (DUF4181)
PDAMAKEP_01901	0.0	ywrD	2.3.2.2, 3.4.19.13	-	E	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	ko00000,ko00001,ko01000,ko01002	gamma-glutamyltransferase
PDAMAKEP_01902	2.79e-107	ywrC	-	-	K	ko:K03719	-	ko00000,ko03000,ko03036	Transcriptional regulator
PDAMAKEP_01903	2.62e-131	ywrB	-	-	P	ko:K07240	-	ko00000,ko02000	Chromate transporter
PDAMAKEP_01904	6.07e-114	ywrA	-	-	P	ko:K07240	-	ko00000,ko02000	COG2059 Chromate transport protein ChrA
PDAMAKEP_01906	6.11e-129	ywqN	-	-	S	-	-	-	NAD(P)H-dependent
PDAMAKEP_01907	4.73e-209	-	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_01908	3.56e-149	nfi	3.1.21.7	-	L	ko:K05982	-	ko00000,ko01000,ko03400	DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA
PDAMAKEP_01910	5.02e-303	ywqJ	-	-	S	-	-	-	Pre-toxin TG
PDAMAKEP_01911	2.47e-50	ywqI	-	-	S	-	-	-	Family of unknown function (DUF5344)
PDAMAKEP_01913	1.45e-108	ywqG	-	-	S	-	-	-	Domain of unknown function (DUF1963)
PDAMAKEP_01914	4.62e-39	ywqG	-	-	S	-	-	-	Domain of unknown function (DUF1963)
PDAMAKEP_01915	2.21e-311	ywqF	1.1.1.22	-	M	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PDAMAKEP_01916	1.75e-180	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	COG4464 Capsular polysaccharide biosynthesis protein
PDAMAKEP_01917	1.06e-152	ywqD	2.7.10.2	-	D	ko:K00903	-	ko00000,ko01000,ko01001	COG0489 ATPases involved in chromosome partitioning
PDAMAKEP_01918	2.17e-162	ywqC	-	-	M	ko:K19420	-	ko00000	biosynthesis protein
PDAMAKEP_01919	3.6e-25	-	-	-	-	-	-	-	-
PDAMAKEP_01920	0.0	ywqB	-	-	S	-	-	-	SWIM zinc finger
PDAMAKEP_01921	0.0	ywqA	-	-	L	-	-	-	COG0553 Superfamily II DNA RNA helicases, SNF2 family
PDAMAKEP_01922	3.72e-202	ywpJ	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolases of the HAD superfamily
PDAMAKEP_01923	4.82e-180	glcR	-	-	K	ko:K22103	-	ko00000,ko03000	COG1349 Transcriptional regulators of sugar metabolism
PDAMAKEP_01924	8.53e-76	ssbB	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Single-stranded DNA-binding protein
PDAMAKEP_01925	3.04e-87	ywpG	-	-	-	-	-	-	-
PDAMAKEP_01926	2.53e-88	ywpF	-	-	S	-	-	-	YwpF-like protein
PDAMAKEP_01927	1.55e-66	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
PDAMAKEP_01928	1.72e-197	ywpD	-	-	T	-	-	-	Histidine kinase
PDAMAKEP_01929	1.61e-77	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PDAMAKEP_01930	6.89e-107	fabZ	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PDAMAKEP_01931	1.01e-252	rapD	-	-	S	ko:K06362	-	ko00000,ko01000	aspartate phosphatase
PDAMAKEP_01932	1.17e-181	flhP	-	-	N	ko:K02392	ko02040,map02040	ko00000,ko00001,ko02035	flagellar basal body
PDAMAKEP_01933	6.18e-173	flhO	-	-	N	ko:K02392	ko02040,map02040	ko00000,ko00001,ko02035	flagellar basal body
PDAMAKEP_01934	1.75e-231	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Rod shape-determining protein
PDAMAKEP_01935	4.88e-59	spoIIID	-	-	K	ko:K06283	-	ko00000,ko03000	Stage III sporulation protein D
PDAMAKEP_01936	8.45e-92	-	-	-	K	-	-	-	COG1846 Transcriptional regulators
PDAMAKEP_01937	1.31e-267	ywoG	-	-	EGP	-	-	-	COG0477 Permeases of the major facilitator superfamily
PDAMAKEP_01938	2.15e-176	ywoF	-	-	P	-	-	-	Right handed beta helix region
PDAMAKEP_01939	3.85e-72	ywoF	-	-	P	-	-	-	Right handed beta helix region
PDAMAKEP_01940	0.0	-	-	-	FH	ko:K03457,ko:K10975	-	ko00000,ko02000	COG1953 Cytosine uracil thiamine allantoin permeases
PDAMAKEP_01941	7.32e-305	ywoD	-	-	EGP	-	-	-	Major facilitator superfamily
PDAMAKEP_01942	1.04e-133	yjgF	-	-	Q	-	-	-	Isochorismatase family
PDAMAKEP_01943	5.04e-101	-	-	-	-	-	-	-	-
PDAMAKEP_01944	1.6e-288	nrgA	-	-	P	ko:K03320	-	ko00000,ko02000	Ammonium transporter
PDAMAKEP_01945	4.51e-77	nrgB	-	-	K	ko:K04751	ko02020,map02020	ko00000,ko00001	Belongs to the P(II) protein family
PDAMAKEP_01946	3.48e-134	bcrC	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	COG0671 Membrane-associated phospholipid phosphatase
PDAMAKEP_01947	7.75e-94	ywnJ	-	-	S	-	-	-	VanZ like family
PDAMAKEP_01948	3.21e-305	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PDAMAKEP_01949	1.85e-161	spoIIQ	-	-	M	ko:K06386	-	ko00000	COG0739 Membrane proteins related to metalloendopeptidases
PDAMAKEP_01950	3.01e-114	ywnH	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	COG1247 Sortase and related acyltransferases
PDAMAKEP_01951	3.99e-17	ywnC	-	-	S	-	-	-	Family of unknown function (DUF5362)
PDAMAKEP_01952	2.37e-90	ywnF	-	-	S	-	-	-	Family of unknown function (DUF5392)
PDAMAKEP_01953	0.0	ywnE	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PDAMAKEP_01954	8.04e-183	mta	-	-	K	ko:K21743	-	ko00000,ko03000	transcriptional
PDAMAKEP_01955	1.24e-77	ywnC	-	-	S	-	-	-	Family of unknown function (DUF5362)
PDAMAKEP_01956	1.69e-144	ywnB	-	-	S	ko:K07118	-	ko00000	NAD(P)H-binding
PDAMAKEP_01957	4.58e-85	ywnA	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_01958	0.0	ureC	3.5.1.5	-	E	ko:K01428	ko00220,ko00230,ko00791,ko01100,ko01120,ko05120,map00220,map00230,map00791,map01100,map01120,map05120	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family
PDAMAKEP_01959	1.85e-82	ureB	3.5.1.5	-	E	ko:K01429	ko00220,ko00230,ko00791,ko01100,ko01120,map00220,map00230,map00791,map01100,map01120	ko00000,ko00001,ko01000	Belongs to the urease beta subunit family
PDAMAKEP_01960	2.35e-67	ureA	3.5.1.5	-	E	ko:K01430	ko00220,ko00230,ko00791,ko01100,ko01120,map00220,map00230,map00791,map01100,map01120	ko00000,ko00001,ko01000	Belongs to the urease gamma subunit family
PDAMAKEP_01961	3.71e-20	csbD	-	-	K	-	-	-	CsbD-like
PDAMAKEP_01962	1.12e-109	ywmF	-	-	S	-	-	-	Peptidase M50
PDAMAKEP_01963	6.22e-129	rapA	-	-	S	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	ko00000,ko00001,ko01000	Response regulator aspartate phosphatase
PDAMAKEP_01964	1.08e-245	moaA	4.1.99.22	-	H	ko:K03639	ko00790,ko01100,ko04122,map00790,map01100,map04122	ko00000,ko00001,ko01000	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
PDAMAKEP_01965	3.69e-186	fdhD	-	-	C	ko:K02379	-	ko00000	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
PDAMAKEP_01967	5.87e-155	ywmD	-	-	S	ko:K07114	-	ko00000,ko02000	protein containing a von Willebrand factor type A (vWA) domain
PDAMAKEP_01968	1.28e-155	ywmC	-	-	S	ko:K07114	-	ko00000,ko02000	protein containing a von Willebrand factor type A (vWA) domain
PDAMAKEP_01969	3.05e-237	spoIID	-	-	D	ko:K06381	-	ko00000	Stage II sporulation protein D
PDAMAKEP_01970	2.02e-305	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PDAMAKEP_01971	3.81e-171	ywmB	-	-	S	-	-	-	TATA-box binding
PDAMAKEP_01972	4.54e-45	ywzB	-	-	S	-	-	-	membrane
PDAMAKEP_01973	7.16e-114	ywmA	-	-	-	-	-	-	-
PDAMAKEP_01974	2.44e-75	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
PDAMAKEP_01975	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PDAMAKEP_01976	4.46e-195	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PDAMAKEP_01977	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PDAMAKEP_01978	1.95e-116	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDAMAKEP_01979	2.62e-79	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PDAMAKEP_01980	3.01e-36	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDAMAKEP_01981	7.08e-166	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
PDAMAKEP_01982	1.91e-81	atpI	-	-	S	ko:K02116	-	ko00000,ko00194	ATP synthase
PDAMAKEP_01983	5.5e-148	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PDAMAKEP_01984	1.78e-302	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PDAMAKEP_01985	2.49e-123	ywlG	-	-	S	-	-	-	Belongs to the UPF0340 family
PDAMAKEP_01986	9.57e-106	rpiB	5.3.1.6	-	G	ko:K01808	ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribose 5-phosphate isomerase
PDAMAKEP_01987	9.54e-102	ywlE	3.1.3.48, 3.9.1.2	-	T	ko:K01104,ko:K20201	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PDAMAKEP_01988	6.48e-117	mntP	-	-	P	-	-	-	Probably functions as a manganese efflux pump
PDAMAKEP_01989	1.43e-248	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PDAMAKEP_01990	2.55e-100	ywlB	-	-	E	-	-	-	Belongs to the acetyltransferase family. ArgA subfamily
PDAMAKEP_01991	1.14e-152	spoIIR	-	-	S	ko:K06387	-	ko00000	stage II sporulation protein R
PDAMAKEP_01992	9.69e-74	ywlA	-	-	S	-	-	-	Uncharacterised protein family (UPF0715)
PDAMAKEP_01994	2.42e-204	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PDAMAKEP_01995	9.95e-245	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PDAMAKEP_01996	2.7e-86	ywkD	-	-	E	ko:K08234	-	ko00000	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PDAMAKEP_01997	3.33e-114	racA	-	-	K	ko:K11686	-	ko00000,ko03036	Required for the formation of axial filaments and for anchoring the origin regions at the cell poles in sporulating cells, thus ensuring proper chromosome segregation in the prespore. Binds in a dispersed manner throughout the chromosome but preferentially to sites clustered in the origin portion of the chromosome, causing condensation of the chromosome and its remodeling into an elongated, anchored structure
PDAMAKEP_01998	9.28e-204	ywkB	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
PDAMAKEP_01999	0.0	ykwA	1.1.1.38	-	C	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	ko00000,ko00001,ko01000	malic enzyme
PDAMAKEP_02000	1.65e-133	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
PDAMAKEP_02001	7e-45	rpmE	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the 23S rRNA
PDAMAKEP_02002	5.53e-303	rho	-	-	K	ko:K03628	ko03018,map03018	ko00000,ko00001,ko03019,ko03021	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PDAMAKEP_02003	3.51e-225	glpX	3.1.3.11	-	G	ko:K02446	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	fructose-1,6-bisphosphatase
PDAMAKEP_02004	1.85e-302	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PDAMAKEP_02005	5.69e-147	tal	2.2.1.2	-	G	ko:K00616	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PDAMAKEP_02006	7.82e-204	fbaA	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Aldolase
PDAMAKEP_02007	1.07e-81	spo0F	-	-	T	ko:K02490	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	COG0784 FOG CheY-like receiver
PDAMAKEP_02008	9.11e-118	ywjG	-	-	S	-	-	-	Domain of unknown function (DUF2529)
PDAMAKEP_02009	2.14e-07	orfX1	-	-	L	-	-	-	Transposase
PDAMAKEP_02010	1.15e-28	-	-	-	L	-	-	-	Integrase core domain
PDAMAKEP_02011	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PDAMAKEP_02012	8.03e-81	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PDAMAKEP_02013	2.01e-267	acdA	-	-	I	-	-	-	acyl-CoA dehydrogenase
PDAMAKEP_02014	0.0	ywjF	-	-	C	-	-	-	COG0247 Fe-S oxidoreductase
PDAMAKEP_02015	1.82e-275	clsB	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the phospholipase D family. Cardiolipin synthase subfamily
PDAMAKEP_02016	1.63e-234	uvsE	-	-	L	ko:K13281	-	ko00000,ko01000	Component in a DNA repair pathway. Removal of UV-light damaged nucleotides. Recognizes pyrimidine dimers and cleave a phosphodiester bond immediately 5' to the lesion
PDAMAKEP_02017	1.87e-57	ywjC	-	-	-	-	-	-	-
PDAMAKEP_02019	9.32e-255	-	-	-	L	-	-	-	COG3666 Transposase and inactivated derivatives
PDAMAKEP_02020	1.84e-122	ywjB	-	-	H	-	-	-	RibD C-terminal domain
PDAMAKEP_02021	5.49e-80	ywjA	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
PDAMAKEP_02022	2.41e-269	ywjA	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
PDAMAKEP_02023	0.0	ywiE	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PDAMAKEP_02024	3.42e-158	narI	1.7.5.1	-	C	ko:K00374	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	Nitrate reductase (gamma
PDAMAKEP_02025	7.94e-122	narJ	-	-	C	ko:K00373	ko02020,map02020	ko00000,ko00001	nitrate reductase
PDAMAKEP_02026	0.0	narH	1.7.5.1	-	C	ko:K00371	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	Nitrate reductase, beta
PDAMAKEP_02027	0.0	narG	1.7.5.1	-	C	ko:K00370	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PDAMAKEP_02028	8.67e-111	arfM	-	-	T	ko:K10914	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	cyclic nucleotide binding
PDAMAKEP_02029	1.84e-179	ywiC	-	-	S	-	-	-	YwiC-like protein
PDAMAKEP_02030	2.3e-168	fnr	-	-	K	-	-	-	helix_turn_helix, cAMP Regulatory protein
PDAMAKEP_02031	1.7e-273	narK	-	-	P	ko:K02575	ko00910,map00910	ko00000,ko00001,ko00002,ko02000	COG2223 Nitrate nitrite transporter
PDAMAKEP_02032	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
PDAMAKEP_02033	4.64e-96	ywiB	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_02034	3.71e-12	-	-	-	S	-	-	-	Bacteriocin subtilosin A
PDAMAKEP_02035	0.0	-	-	-	C	ko:K22227	-	ko00000	Fe-S oxidoreductases
PDAMAKEP_02037	1.5e-169	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
PDAMAKEP_02038	1.98e-296	mgtA	3.6.3.2	-	P	ko:K01531,ko:K16905	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATPase, P-type transporting, HAD superfamily, subfamily IC
PDAMAKEP_02039	3.29e-274	-	2.7.1.26, 2.7.7.2	-	L	ko:K07263,ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01002	Peptidase, M16
PDAMAKEP_02040	8.99e-313	-	-	-	L	-	-	-	Peptidase, M16
PDAMAKEP_02042	0.0	ywhL	-	-	CO	-	-	-	amine dehydrogenase activity
PDAMAKEP_02043	9.04e-273	ywhK	-	-	CO	-	-	-	amine dehydrogenase activity
PDAMAKEP_02044	7.36e-24	rapA1	-	-	S	ko:K06359,ko:K06361	ko02024,map02024	ko00000,ko00001,ko01000	aspartate phosphatase
PDAMAKEP_02045	8.54e-74	rapA1	-	-	S	ko:K06359,ko:K06361	ko02024,map02024	ko00000,ko00001,ko01000	aspartate phosphatase
PDAMAKEP_02047	6.02e-215	speB	3.5.3.11	-	E	ko:K01480	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the arginase family
PDAMAKEP_02048	1.93e-204	speE	2.5.1.16	-	E	ko:K00797	ko00270,ko00330,ko00410,ko00480,ko01100,map00270,map00330,map00410,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
PDAMAKEP_02049	0.0	pbpG	2.4.1.129, 3.4.16.4	GT51	M	ko:K21464	ko00550,map00550	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
PDAMAKEP_02050	7.83e-123	ywhD	-	-	S	-	-	-	YwhD family
PDAMAKEP_02051	3.29e-154	ywhC	-	-	S	-	-	-	Peptidase family M50
PDAMAKEP_02052	1.43e-35	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	4-oxalocrotonate tautomerase
PDAMAKEP_02053	1.76e-94	ywhA	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_02054	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PDAMAKEP_02056	8.75e-300	mmr	-	-	U	ko:K08166	-	ko00000,ko02000	Major Facilitator Superfamily
PDAMAKEP_02057	3.15e-103	yffB	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_02058	1.47e-115	ywgA	-	-	-	ko:K09388	-	ko00000	-
PDAMAKEP_02059	0.0	ywfO	-	-	S	ko:K06885	-	ko00000	COG1078 HD superfamily phosphohydrolases
PDAMAKEP_02060	8.55e-49	ywzC	-	-	S	-	-	-	Belongs to the UPF0741 family
PDAMAKEP_02061	8.85e-142	rsfA_1	-	-	-	ko:K06314	-	ko00000,ko03000	-
PDAMAKEP_02062	2.39e-199	ywfM	-	-	EG	ko:K03298	-	ko00000,ko02000	EamA-like transporter family
PDAMAKEP_02063	4.34e-199	lipL	2.3.1.200, 2.3.1.204	-	H	ko:K16869,ko:K18821	-	ko00000,ko01000	Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes
PDAMAKEP_02064	3.07e-208	cysL	-	-	K	ko:K21900	-	ko00000,ko03000	Transcriptional regulator
PDAMAKEP_02065	3.93e-223	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	In Salmonella this enzyme is required for ethanolamine catabolism
PDAMAKEP_02066	5.69e-186	ywfI	-	-	C	ko:K00435	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko01000	May function as heme-dependent peroxidase
PDAMAKEP_02067	1.36e-121	ywfH	-	-	IQ	ko:K19550	ko01130,map01130	ko00000,ko00001,ko00002,ko01000	Enoyl-(Acyl carrier protein) reductase
PDAMAKEP_02068	6.88e-15	ywfH	-	-	IQ	ko:K19550	ko01130,map01130	ko00000,ko00001,ko00002,ko01000	Enoyl-(Acyl carrier protein) reductase
PDAMAKEP_02069	6.3e-274	ywfA	-	-	EGP	-	-	-	-transporter
PDAMAKEP_02070	0.0	rocC	-	-	E	ko:K02205,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
PDAMAKEP_02071	0.0	rocB	-	-	E	-	-	-	arginine degradation protein
PDAMAKEP_02072	0.0	rocA	1.2.1.88	-	C	ko:K00294	ko00250,ko00330,ko01100,map00250,map00330,map01100	ko00000,ko00001,ko01000	Belongs to the aldehyde dehydrogenase family. RocA subfamily
PDAMAKEP_02073	2.29e-261	rocG	1.4.1.2	-	E	ko:K00260	ko00220,ko00250,ko00430,ko00910,ko01100,map00220,map00250,map00430,map00910,map01100	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
PDAMAKEP_02074	3.7e-101	-	-	-	-	-	-	-	-
PDAMAKEP_02075	3.73e-113	spsL	5.1.3.13	-	M	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Spore Coat
PDAMAKEP_02076	4.72e-204	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PDAMAKEP_02077	6.14e-232	spsJ	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PDAMAKEP_02078	2.5e-176	spsI	2.7.7.24	-	M	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PDAMAKEP_02079	8.14e-240	spsG	-	-	M	-	-	-	Spore Coat
PDAMAKEP_02080	2.47e-164	spsF	-	-	M	ko:K07257	-	ko00000	Spore Coat
PDAMAKEP_02081	7.93e-271	pseI	2.5.1.56, 2.5.1.97	-	M	ko:K01654,ko:K15898	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	acid synthase
PDAMAKEP_02082	8.17e-208	spsD	2.3.1.210	-	K	ko:K16704	-	ko00000,ko01000	Spore Coat
PDAMAKEP_02083	2.07e-281	spsC	2.6.1.102	-	E	ko:K13010	ko00520,map00520	ko00000,ko00001,ko01000,ko01005,ko01007	Belongs to the DegT DnrJ EryC1 family
PDAMAKEP_02084	0.0	spsB	-	-	M	-	-	-	Capsule polysaccharide biosynthesis protein
PDAMAKEP_02085	8.08e-187	spsA	-	-	M	-	-	-	Spore Coat
PDAMAKEP_02086	7.3e-112	gerQ	-	-	S	ko:K06305	-	ko00000	Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA
PDAMAKEP_02087	1.59e-78	ywdK	-	-	S	-	-	-	small membrane protein
PDAMAKEP_02088	2.95e-300	ywdJ	-	-	F	-	-	-	Xanthine uracil
PDAMAKEP_02089	1.08e-63	ywdI	-	-	S	-	-	-	Family of unknown function (DUF5327)
PDAMAKEP_02090	0.0	ywdH	1.2.1.3	-	C	ko:K00128	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
PDAMAKEP_02091	2.32e-166	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PDAMAKEP_02092	1.34e-191	ywdF	-	-	S	-	-	-	Glycosyltransferase like family 2
PDAMAKEP_02094	5.9e-144	ywdD	-	-	-	-	-	-	-
PDAMAKEP_02095	7.92e-76	-	-	-	K	ko:K10947	-	ko00000,ko03000	Transcriptional regulator PadR-like family
PDAMAKEP_02096	2.21e-187	pdxK	2.7.1.35, 2.7.1.49, 2.7.4.7	-	H	ko:K00868,ko:K00941	ko00730,ko00750,ko01100,map00730,map00750,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
PDAMAKEP_02097	6.19e-39	ywdA	-	-	-	-	-	-	-
PDAMAKEP_02098	0.0	sacA	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
PDAMAKEP_02099	0.0	sacP	2.7.1.211	-	G	ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PDAMAKEP_02100	3.96e-178	-	-	-	P	ko:K02598	-	ko00000,ko02000	Formate/nitrite transporter
PDAMAKEP_02101	3.69e-193	sacT	-	-	K	ko:K03488	-	ko00000,ko03000	transcriptional antiterminator
PDAMAKEP_02104	0.0	prtS	3.4.21.110, 3.4.21.96	-	O	ko:K01361,ko:K08652,ko:K14647	ko02024,map02024	ko00000,ko00001,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
PDAMAKEP_02105	1.91e-235	ywcH	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PDAMAKEP_02106	2.31e-178	nfrA1	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	Oxidoreductase
PDAMAKEP_02107	1.26e-268	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
PDAMAKEP_02108	1.33e-51	ywcE	-	-	S	-	-	-	Required for proper spore morphogenesis. Important for spore germination
PDAMAKEP_02109	1.12e-83	qoxD	1.10.3.12	-	C	ko:K02829	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	quinol oxidase, subunit
PDAMAKEP_02110	1.2e-144	qoxC	1.10.3.12	-	C	ko:K02828	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	quinol oxidase, subunit
PDAMAKEP_02111	0.0	qoxB	1.10.3.12	-	C	ko:K02827	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
PDAMAKEP_02112	6.94e-226	qoxA	1.10.3.12	-	C	ko:K02826	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I
PDAMAKEP_02113	5.11e-49	ydaS	-	-	S	-	-	-	membrane
PDAMAKEP_02114	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
PDAMAKEP_02115	6.49e-290	galK	2.7.1.6	-	G	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PDAMAKEP_02116	3.33e-77	gtcA	-	-	S	-	-	-	GtrA-like protein
PDAMAKEP_02117	1.1e-154	ywcC	-	-	K	-	-	-	transcriptional regulator
PDAMAKEP_02119	7.41e-65	ywcB	-	-	S	-	-	-	Protein of unknown function, DUF485
PDAMAKEP_02120	0.0	ywcA	-	-	S	ko:K14393	-	ko00000,ko02000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PDAMAKEP_02121	9.32e-255	-	-	-	L	-	-	-	COG3666 Transposase and inactivated derivatives
PDAMAKEP_02122	7.65e-143	ywbO	-	-	Q	-	-	-	dithiol-disulfide isomerase involved in polyketide biosynthesis
PDAMAKEP_02123	1.04e-306	ywbN	-	-	P	ko:K07223,ko:K16301	-	ko00000,ko01000,ko02000	Dyp-type peroxidase family protein
PDAMAKEP_02124	2.47e-44	ycdO	-	-	P	ko:K07224	-	ko00000,ko02000	periplasmic lipoprotein involved in iron transport
PDAMAKEP_02125	1e-182	ycdO	-	-	P	ko:K07224	-	ko00000,ko02000	periplasmic lipoprotein involved in iron transport
PDAMAKEP_02126	0.0	-	-	-	P	ko:K07243	-	ko00000,ko02000	COG0672 High-affinity Fe2 Pb2 permease
PDAMAKEP_02127	7.07e-146	thiE	2.5.1.3	-	H	ko:K00788	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PDAMAKEP_02128	6.29e-183	thiM	2.7.1.50	-	H	ko:K00878	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PDAMAKEP_02129	2.7e-203	ywbI	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_02130	4.47e-76	ywbH	-	-	S	ko:K06518	-	ko00000,ko02000	Increases the activity of extracellular murein hydrolases possibly by mediating their export via hole formation. Inhibited by the antiholin-like proteins LrgAB. In an unstressed cell, the LrgAB products probably inhibit the function of the CidA protein. When a cell is stressed by the addition of antibiotics or by other factors in the environment, CidA possibly oligomerizes within the bacterial cell membrane, creating lesions that disrupt the proton motive force, which in turn results in loss of cell viability. These lesions are also hypothesized to regulate the subsequent cell lysis by either allowing the murein hydrolases access to the cell wall substrate and or regulating their activity by a
PDAMAKEP_02131	1.21e-143	ywbG	-	-	M	-	-	-	effector of murein hydrolase
PDAMAKEP_02132	5.87e-275	ywbF	-	-	EGP	ko:K05820	-	ko00000,ko02000	Nucleoside H+ symporter
PDAMAKEP_02133	1.05e-36	ywbE	-	-	S	-	-	-	Uncharacterized conserved protein (DUF2196)
PDAMAKEP_02134	1.15e-279	ywbD	2.1.1.191	-	J	ko:K06969	-	ko00000,ko01000,ko03009	Methyltransferase
PDAMAKEP_02135	1.15e-86	ywbC	4.4.1.5	-	E	ko:K01759	ko00620,map00620	ko00000,ko00001,ko01000	glyoxalase
PDAMAKEP_02136	2.5e-161	ywbB	-	-	S	-	-	-	Protein of unknown function (DUF2711)
PDAMAKEP_02137	1.49e-310	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDAMAKEP_02138	0.0	epr	3.4.21.62	-	O	ko:K01342,ko:K13277	ko02024,map02024	ko00000,ko00001,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
PDAMAKEP_02139	4.15e-312	sacX	2.7.1.211	-	G	ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PDAMAKEP_02140	2.6e-195	sacT	-	-	K	ko:K03488	-	ko00000,ko03000	transcriptional antiterminator
PDAMAKEP_02141	5.37e-216	gspA	-	-	M	-	-	-	General stress
PDAMAKEP_02142	3.12e-161	ywaF	-	-	S	-	-	-	Integral membrane protein
PDAMAKEP_02143	2.15e-115	ywaE	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_02144	4.48e-297	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PDAMAKEP_02145	9.14e-317	ywaD	3.4.11.10, 3.4.11.6	-	S	ko:K19701	-	ko00000,ko01000,ko01002	PA domain
PDAMAKEP_02146	1.08e-115	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PDAMAKEP_02147	5.58e-64	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
PDAMAKEP_02148	3.96e-165	-	-	-	EGP	-	-	-	Permeases of the major facilitator superfamily
PDAMAKEP_02149	2.52e-149	ywaC	2.7.6.5	-	S	ko:K00951,ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	protein conserved in bacteria
PDAMAKEP_02150	5.95e-212	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the MenA family. Type 1 subfamily
PDAMAKEP_02151	0.0	dltA	6.1.1.13	-	Q	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PDAMAKEP_02152	9.34e-297	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	membrane protein involved in D-alanine export
PDAMAKEP_02153	6.83e-50	dltC	6.1.1.13	-	IQ	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PDAMAKEP_02154	4.09e-294	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	COG3966 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PDAMAKEP_02155	3.97e-176	dltE	-	-	M	ko:K14189	-	ko00000,ko01000	Belongs to the short-chain dehydrogenases reductases (SDR) family
PDAMAKEP_02156	1.07e-263	ilvE	2.6.1.42	-	E	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Branched-chain amino acid aminotransferase
PDAMAKEP_02157	0.0	licH	3.2.1.86	GT4	G	ko:K01222	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
PDAMAKEP_02158	1.58e-50	licA	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PDAMAKEP_02159	9.2e-317	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDAMAKEP_02160	1.89e-67	licB	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	transporter subunit IIB
PDAMAKEP_02161	0.0	licR	-	-	GKT	ko:K03491	-	ko00000,ko03000	Mga helix-turn-helix domain
PDAMAKEP_02162	8.94e-28	yxzF	-	-	-	-	-	-	-
PDAMAKEP_02163	3.23e-145	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
PDAMAKEP_02164	0.0	katX	1.11.1.6	-	P	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	ko00000,ko00001,ko00002,ko01000	serves to protect cells from the toxic effects of hydrogen peroxide
PDAMAKEP_02165	4.7e-268	yxlH	-	-	EGP	-	-	-	Major Facilitator Superfamily
PDAMAKEP_02166	2.98e-126	yxlG	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
PDAMAKEP_02167	2.75e-187	yxlF	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PDAMAKEP_02168	2.17e-39	yxlE	-	-	S	-	-	-	Phospholipase_D-nuclease N-terminal
PDAMAKEP_02169	6.66e-39	-	-	-	-	-	-	-	-
PDAMAKEP_02170	1.58e-52	yxlC	-	-	S	-	-	-	Family of unknown function (DUF5345)
PDAMAKEP_02171	1.06e-123	sigY	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PDAMAKEP_02172	0.0	yxlA	-	-	F	ko:K03457	-	ko00000	Belongs to the purine-cytosine permease (2.A.39) family
PDAMAKEP_02173	2.42e-198	nnrD	4.2.1.136, 5.1.99.6	-	G	ko:K17758,ko:K17759	-	ko00000,ko01000	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PDAMAKEP_02174	0.0	cydD	-	-	V	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ATP-binding protein
PDAMAKEP_02175	0.0	cydC	-	-	V	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ATP-binding
PDAMAKEP_02176	2.35e-243	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome d ubiquinol oxidase, subunit II
PDAMAKEP_02177	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	oxidase, subunit
PDAMAKEP_02178	4.43e-307	cimH	-	-	C	-	-	-	COG3493 Na citrate symporter
PDAMAKEP_02179	0.0	-	-	-	O	-	-	-	Peptidase family M48
PDAMAKEP_02181	5.28e-199	yxkH	-	-	G	-	-	-	Polysaccharide deacetylase
PDAMAKEP_02182	3.44e-261	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PDAMAKEP_02183	1.12e-209	lrp	-	-	QT	-	-	-	PucR C-terminal helix-turn-helix domain
PDAMAKEP_02184	0.0	aldY	1.2.1.3, 1.2.1.67	-	C	ko:K00128,ko:K21802	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00627,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00627,map00903,map00981,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PDAMAKEP_02185	2.29e-188	yxkD	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PDAMAKEP_02186	2.35e-98	yxkC	-	-	S	-	-	-	Domain of unknown function (DUF4352)
PDAMAKEP_02187	1.22e-250	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
PDAMAKEP_02188	6.58e-101	-	-	-	S	-	-	-	Protein of unknown function (DUF1453)
PDAMAKEP_02189	2.22e-239	-	-	-	T	-	-	-	Signal transduction histidine kinase
PDAMAKEP_02190	3.14e-147	-	-	-	K	ko:K02479	-	ko00000,ko02022	helix_turn_helix, Lux Regulon
PDAMAKEP_02191	1.5e-296	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
PDAMAKEP_02194	2.37e-110	yxjI	-	-	S	-	-	-	LURP-one-related
PDAMAKEP_02195	5.01e-276	yxjG	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Methionine synthase
PDAMAKEP_02196	3.66e-274	yxjG	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Methionine synthase
PDAMAKEP_02197	1.41e-115	yxjF	1.1.1.30	-	IQ	ko:K00019	ko00072,ko00650,ko01100,map00072,map00650,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetoacetate from 3-hydroxybutyrate
PDAMAKEP_02198	7.78e-33	yxjF	1.1.1.30	-	IQ	ko:K00019	ko00072,ko00650,ko01100,map00072,map00650,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetoacetate from 3-hydroxybutyrate
PDAMAKEP_02199	4.86e-150	scoB	2.8.3.5	-	I	ko:K01029	ko00072,ko00280,ko00650,map00072,map00280,map00650	ko00000,ko00001,ko01000	COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit
PDAMAKEP_02200	7.71e-167	scoA	2.8.3.5	-	I	ko:K01028	ko00072,ko00280,ko00650,map00072,map00280,map00650	ko00000,ko00001,ko01000	COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
PDAMAKEP_02201	0.0	yxjC	-	-	EG	-	-	-	COG2610 H gluconate symporter and related permeases
PDAMAKEP_02202	1.4e-200	yxjB	2.1.1.187	-	Q	ko:K00563	-	ko00000,ko01000,ko03009	Methyltransferase domain
PDAMAKEP_02203	2.15e-99	-	-	-	S	-	-	-	Protein of unknown function (DUF421)
PDAMAKEP_02204	1.59e-65	-	-	-	L	-	-	-	Transposase
PDAMAKEP_02205	3.17e-176	-	-	-	L	ko:K07497	-	ko00000	COG2801 Transposase and inactivated derivatives
PDAMAKEP_02206	0.0	-	-	-	I	-	-	-	PLD-like domain
PDAMAKEP_02207	4.54e-91	-	-	-	S	-	-	-	Protein of unknown function (DUF421)
PDAMAKEP_02208	1.38e-16	-	-	-	S	-	-	-	Protein of unknown function (DUF421)
PDAMAKEP_02209	2.79e-193	-	-	-	S	-	-	-	membrane
PDAMAKEP_02210	1.15e-39	-	-	-	S	-	-	-	Protein of unknown function (DUF1657)
PDAMAKEP_02211	1.77e-74	spoVAE	-	-	S	ko:K06407	-	ko00000	stage V sporulation protein
PDAMAKEP_02212	1e-249	spoVAD	-	-	I	ko:K06406	-	ko00000	Stage V sporulation protein AD
PDAMAKEP_02213	4.11e-105	spoVAC	-	-	S	ko:K06405	-	ko00000	stage V sporulation protein AC
PDAMAKEP_02214	8.01e-102	-	-	-	S	-	-	-	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PDAMAKEP_02215	3.72e-36	-	-	-	S	-	-	-	Protein of unknown function (DUF1657)
PDAMAKEP_02216	9.14e-206	-	-	-	P	-	-	-	Catalase
PDAMAKEP_02217	2.56e-34	-	-	-	S	-	-	-	Protein of unknown function (DUF2642)
PDAMAKEP_02218	2.6e-08	-	-	-	S	-	-	-	TIGRFAM germination protein, Ger(x)C family
PDAMAKEP_02219	9.72e-193	-	-	-	EG	-	-	-	Spore germination protein
PDAMAKEP_02220	5.09e-42	-	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	n-acetylmuramoyl-L-alanine amidase
PDAMAKEP_02221	2.2e-100	-	-	-	-	-	-	-	-
PDAMAKEP_02222	2.89e-25	-	-	-	L	-	-	-	Transposase and inactivated derivatives, TnpA family
PDAMAKEP_02223	5.32e-60	-	-	-	L	-	-	-	Transposase and inactivated derivatives, TnpA family
PDAMAKEP_02224	3.47e-268	nupG	-	-	F	ko:K16323	-	ko00000,ko02000	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
PDAMAKEP_02225	9.34e-132	-	-	-	T	-	-	-	Domain of unknown function (DUF4163)
PDAMAKEP_02226	2.28e-63	yxiS	-	-	-	-	-	-	-
PDAMAKEP_02227	0.0	katE	1.11.1.6	-	P	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	ko00000,ko00001,ko00002,ko01000	serves to protect cells from the toxic effects of hydrogen peroxide
PDAMAKEP_02228	2e-284	citH	-	-	C	ko:K03300,ko:K11639	ko02020,map02020	ko00000,ko00001	Citrate transporter
PDAMAKEP_02229	3.06e-184	bglS	-	-	M	-	-	-	licheninase activity
PDAMAKEP_02230	1.72e-177	licT	-	-	K	ko:K03488	-	ko00000,ko03000	transcriptional antiterminator
PDAMAKEP_02231	4.37e-142	-	-	-	-	-	-	-	-
PDAMAKEP_02232	5.16e-270	yxiO	-	-	S	ko:K06902	ko04138,map04138	ko00000,ko00001,ko02000,ko04131	COG2270 Permeases of the major facilitator superfamily
PDAMAKEP_02233	0.0	dbpA	3.6.4.13	-	JKL	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes
PDAMAKEP_02234	2.48e-274	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
PDAMAKEP_02237	4.75e-57	yxiJ	-	-	S	-	-	-	YxiJ-like protein
PDAMAKEP_02238	1.6e-108	yxiI	-	-	S	-	-	-	Protein of unknown function (DUF2716)
PDAMAKEP_02239	1.98e-172	-	-	-	-	-	-	-	-
PDAMAKEP_02242	6.09e-50	-	-	-	S	-	-	-	Protein of unknown function (DUF2750)
PDAMAKEP_02243	9.7e-68	yxxG	-	-	-	-	-	-	-
PDAMAKEP_02244	4.67e-89	yxiG	-	-	-	-	-	-	-
PDAMAKEP_02245	1.1e-58	-	-	-	-	-	-	-	-
PDAMAKEP_02246	7.13e-100	-	-	-	-	-	-	-	-
PDAMAKEP_02247	8.9e-119	-	-	-	S	-	-	-	Protein of unknown function (DUF4240)
PDAMAKEP_02248	5.06e-175	-	-	-	-	-	-	-	-
PDAMAKEP_02250	1.27e-69	-	-	-	-	-	-	-	-
PDAMAKEP_02251	6.47e-100	wapA	-	-	M	-	-	-	COG3209 Rhs family protein
PDAMAKEP_02252	3.29e-19	yxiJ	-	-	S	-	-	-	YxiJ-like protein
PDAMAKEP_02253	0.0	wapA	-	-	M	-	-	-	COG3209 Rhs family protein
PDAMAKEP_02254	4.88e-209	yxxF	-	-	EG	-	-	-	EamA-like transporter family
PDAMAKEP_02255	8.5e-95	yxiE	-	-	T	-	-	-	Belongs to the universal stress protein A family
PDAMAKEP_02256	0.0	bglH	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PDAMAKEP_02257	1.56e-53	-	-	-	-	-	-	-	-
PDAMAKEP_02258	5.35e-102	-	-	-	S	ko:K21494	-	ko00000,ko02048	SMI1 / KNR4 family
PDAMAKEP_02259	0.0	-	-	-	S	ko:K21493	-	ko00000,ko01000,ko02048	nuclease activity
PDAMAKEP_02260	3.27e-53	yxiC	-	-	S	-	-	-	Family of unknown function (DUF5344)
PDAMAKEP_02261	6.24e-36	-	-	-	S	-	-	-	Domain of unknown function (DUF5082)
PDAMAKEP_02262	0.0	-	-	-	L	-	-	-	HKD family nuclease
PDAMAKEP_02263	1.23e-78	mutT	3.6.1.55	-	L	ko:K03574	-	ko00000,ko01000,ko03400	COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes
PDAMAKEP_02264	1.74e-31	-	-	-	L	-	-	-	COG1112 Superfamily I DNA and RNA helicases and helicase subunits
PDAMAKEP_02265	3.17e-176	-	-	-	L	ko:K07497	-	ko00000	COG2801 Transposase and inactivated derivatives
PDAMAKEP_02266	1.59e-65	-	-	-	L	-	-	-	Transposase
PDAMAKEP_02267	3.15e-125	-	-	-	L	-	-	-	Protein of unknown function (DUF2726)
PDAMAKEP_02268	2.58e-309	yxiA	3.2.1.99	GH43	G	ko:K06113	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 43 family
PDAMAKEP_02269	0.0	hutU	4.2.1.49	-	E	ko:K01712	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
PDAMAKEP_02270	4.32e-297	hutI	3.5.2.7	-	Q	ko:K01468	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Imidazolone-5-propionate hydrolase
PDAMAKEP_02271	4.95e-149	hutG	3.5.3.8	-	E	ko:K01479	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N-formimidoyl-L-glutamate to L-glutamate and formamide
PDAMAKEP_02272	8.11e-299	pdp	2.4.2.2	-	F	ko:K00756	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	phosphorylase
PDAMAKEP_02273	1.92e-263	nupC	-	-	F	ko:K11535	-	ko00000,ko02000	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
PDAMAKEP_02274	8.3e-150	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PDAMAKEP_02275	4.26e-222	deoR	-	-	K	ko:K05346	-	ko00000,ko03000	COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain
PDAMAKEP_02276	2.51e-134	-	-	-	S	-	-	-	Domain of Unknown Function (DUF1206)
PDAMAKEP_02277	2.81e-41	-	-	-	S	-	-	-	Domain of Unknown Function (DUF1206)
PDAMAKEP_02278	1.9e-256	eutH	-	-	E	ko:K04023	-	ko00000	Ethanolamine utilisation protein, EutH
PDAMAKEP_02279	1.87e-316	yxeQ	-	-	S	-	-	-	MmgE/PrpD family
PDAMAKEP_02280	2.89e-272	yxeP	-	-	E	ko:K21613	-	ko00000,ko01000,ko01002	hydrolase activity
PDAMAKEP_02281	1.95e-170	yxeO	-	-	P	ko:K16960,ko:K16963	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PDAMAKEP_02282	3e-148	yxeN	-	-	P	ko:K10009,ko:K16962	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0765 ABC-type amino acid transport system, permease component
PDAMAKEP_02283	4.3e-186	yxeM	-	-	M	ko:K16961	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 3 family
PDAMAKEP_02284	2.99e-119	yxeL	-	-	K	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PDAMAKEP_02285	0.0	yxeK	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PDAMAKEP_02286	6.69e-238	yxeI	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolases, choloylglycine hydrolase family
PDAMAKEP_02287	5.69e-194	yxeH	-	-	S	-	-	-	hydrolases of the HAD superfamily
PDAMAKEP_02290	7.32e-42	yxeE	-	-	-	-	-	-	-
PDAMAKEP_02291	7.57e-28	yxeD	-	-	-	-	-	-	-
PDAMAKEP_02292	6.79e-91	-	-	-	-	-	-	-	-
PDAMAKEP_02293	7.4e-227	fhuD	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PDAMAKEP_02294	5.95e-77	yxeA	-	-	S	-	-	-	Protein of unknown function (DUF1093)
PDAMAKEP_02295	0.0	yxdM	-	-	V	ko:K11636	ko02020,map02020	ko00000,ko00001,ko00002,ko02000	ABC transporter (permease)
PDAMAKEP_02296	3.01e-178	yxdL	-	-	V	ko:K11635	ko02020,map02020	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PDAMAKEP_02297	2.7e-231	yxdK	2.7.13.3	-	T	ko:K11633	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PDAMAKEP_02298	2.8e-160	yxdJ	-	-	T	ko:K02483,ko:K11634	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PDAMAKEP_02299	2.83e-204	fbaA	4.1.2.13, 4.1.2.29	-	F	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Produces dihydroxyacetone phosphate (DHAP or glycerone phosphate) and malonic semialdehyde (MSA or 3-oxopropanoate) from 6-phospho-5-dehydro-2-deoxy-D-gluconate (DKGP)
PDAMAKEP_02300	2.67e-192	iolI	5.3.99.11	-	G	ko:K06606	ko00562,ko01120,map00562,map01120	ko00000,ko00001,ko01000	Involved in the reversible interconverion of 2-keto-myo- inositol (2KMI, inosose or 2,4,6 3,5-pentahydroxycyclohexanone) to 1-keto-D-chiro-inositol (1KDCI or 2,3,5 4,6- pentahydroxycyclohexanone)
PDAMAKEP_02301	4.4e-212	iolH	-	-	G	ko:K06605	-	ko00000	Xylose isomerase-like TIM barrel
PDAMAKEP_02302	4.44e-251	iolG	1.1.1.18, 1.1.1.369	-	S	ko:K00010	ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130	ko00000,ko00001,ko01000	Involved in the oxidation of myo-inositol (MI) and D- chiro-inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D-chiro-inositol (1KDCI), respectively
PDAMAKEP_02303	4.19e-298	iolF	-	-	EGP	ko:K06610	-	ko00000,ko02000	Major facilitator superfamily
PDAMAKEP_02304	2.47e-222	iolE	4.2.1.44	-	G	ko:K03335	ko00562,ko01100,ko01120,map00562,map01100,map01120	ko00000,ko00001,ko01000	Catalyzes the dehydration of inosose (2-keto-myo- inositol, 2KMI or 2,4,6 3,5-pentahydroxycyclohexanone) to 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi- inositol)
PDAMAKEP_02305	0.0	iolD	3.7.1.22	-	E	ko:K03336	ko00562,ko01100,ko01120,map00562,map01100,map01120	ko00000,ko00001,ko01000	Involved in the cleavage of the C1-C2 bond of 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy- glucuronate (5DG)
PDAMAKEP_02306	3.52e-227	iolC	2.7.1.92	-	G	ko:K03338	ko00562,ko01100,ko01120,map00562,map01100,map01120	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5- dehydro-2-deoxy-D-gluconate (DKGP)
PDAMAKEP_02307	1.46e-201	iolB	5.3.1.30	-	G	ko:K03337	ko00562,ko01100,ko01120,map00562,map01100,map01120	ko00000,ko00001,ko01000	Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate)
PDAMAKEP_02308	0.0	iolA	1.2.1.18, 1.2.1.27	-	C	ko:K00140	ko00280,ko00410,ko00562,ko00640,ko01100,ko01200,map00280,map00410,map00562,map00640,map01100,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PDAMAKEP_02309	1.56e-177	iolR	-	-	K	ko:K06608,ko:K11534	-	ko00000,ko03000	COG1349 Transcriptional regulators of sugar metabolism
PDAMAKEP_02310	3.52e-224	iolS	-	-	C	ko:K06607	-	ko00000,ko01000	Aldo keto reductase
PDAMAKEP_02312	8.67e-64	yxcD	-	-	S	-	-	-	Protein of unknown function (DUF2653)
PDAMAKEP_02313	3.41e-312	csbC	-	-	U	ko:K02100,ko:K06609,ko:K08139	ko04113,map04113	ko00000,ko00001,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PDAMAKEP_02314	0.0	htpG	-	-	O	ko:K04079	ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418	ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147	Molecular chaperone. Has ATPase activity
PDAMAKEP_02316	8.38e-193	yxbG	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
PDAMAKEP_02317	1.03e-265	yxbF	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PDAMAKEP_02318	2.4e-313	aldX	1.2.1.3	-	C	ko:K00128	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
PDAMAKEP_02319	2.09e-16	yxaI	-	-	S	-	-	-	membrane protein domain
PDAMAKEP_02320	1.73e-135	yxaL	-	-	S	-	-	-	PQQ-like domain
PDAMAKEP_02321	7.22e-79	-	-	-	S	-	-	-	Family of unknown function (DUF5391)
PDAMAKEP_02322	4.03e-99	yxaI	-	-	S	-	-	-	membrane protein domain
PDAMAKEP_02323	3.08e-285	-	-	-	P	ko:K07148	-	ko00000	Protein of unknown function (DUF418)
PDAMAKEP_02324	7.9e-246	-	1.13.11.24	-	S	ko:K07155	-	ko00000,ko01000	AraC-like ligand binding domain
PDAMAKEP_02325	9.61e-131	yxaF	-	-	K	ko:K18939	-	ko00000,ko00002,ko03000	Transcriptional regulator
PDAMAKEP_02326	8.67e-255	yxnA	-	-	IQ	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
PDAMAKEP_02327	6.83e-94	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PDAMAKEP_02328	5.96e-77	-	-	-	S	ko:K06518	-	ko00000,ko02000	LrgA family
PDAMAKEP_02329	2.19e-153	yxaC	-	-	M	-	-	-	effector of murein hydrolase
PDAMAKEP_02330	2.01e-242	-	-	-	GM	ko:K19426	-	ko00000,ko01000	Polysaccharide pyruvyl transferase
PDAMAKEP_02331	5.73e-264	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
PDAMAKEP_02332	2.56e-163	gntR	-	-	K	ko:K11476	-	ko00000,ko03000	transcriptional
PDAMAKEP_02333	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
PDAMAKEP_02334	2.39e-294	gntP	-	-	EG	ko:K03299	-	ko00000,ko02000	COG2610 H gluconate symporter and related permeases
PDAMAKEP_02335	0.0	gntZ	1.1.1.343, 1.1.1.44	-	G	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PDAMAKEP_02336	2.68e-135	ahpC	1.11.1.15	-	O	ko:K03386	ko04214,map04214	ko00000,ko00001,ko01000,ko04147	Alkyl hydroperoxide reductase
PDAMAKEP_02337	0.0	ahpF	-	-	O	ko:K03387	-	ko00000,ko01000	Alkyl hydroperoxide reductase
PDAMAKEP_02338	0.0	bglA	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PDAMAKEP_02339	1.03e-23	bglP	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PDAMAKEP_02340	1.13e-158	yydK	-	-	K	ko:K03489	-	ko00000,ko03000	Transcriptional regulator
PDAMAKEP_02341	2.05e-24	-	-	-	-	-	-	-	-
PDAMAKEP_02342	4.51e-151	-	-	-	S	ko:K16916	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-2 family transporter protein
PDAMAKEP_02343	3.42e-142	-	-	-	P	ko:K16917	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PDAMAKEP_02344	0.0	fbp	3.1.3.11	-	G	ko:K04041	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Firmicute fructose-1,6-bisphosphatase
PDAMAKEP_02345	5.02e-208	-	-	-	L	-	-	-	UvrD/REP helicase N-terminal domain
PDAMAKEP_02346	1.09e-283	-	-	-	L	-	-	-	Protein of unknown function (DUF2813)
PDAMAKEP_02347	5e-106	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PDAMAKEP_02349	3.57e-84	-	-	-	-	-	-	-	-
PDAMAKEP_02350	2.03e-294	yycR	1.1.1.1, 1.1.1.284, 1.2.1.46	-	E	ko:K00121,ko:K00148	ko00010,ko00071,ko00350,ko00625,ko00626,ko00680,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko05204,map00010,map00071,map00350,map00625,map00626,map00680,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01200,map01220,map05204	ko00000,ko00001,ko01000	COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases
PDAMAKEP_02352	5.22e-28	yycQ	-	-	S	-	-	-	Protein of unknown function (DUF2651)
PDAMAKEP_02353	1.99e-262	yycP	-	-	-	-	-	-	-
PDAMAKEP_02354	9.3e-167	yycO	-	-	S	-	-	-	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
PDAMAKEP_02355	4.89e-108	yycN	-	-	K	-	-	-	Acetyltransferase
PDAMAKEP_02356	1.23e-238	-	-	-	S	-	-	-	aspartate phosphatase
PDAMAKEP_02358	5.33e-212	rocF	3.5.3.1	-	E	ko:K01476	ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146	ko00000,ko00001,ko00002,ko01000	Belongs to the arginase family
PDAMAKEP_02359	0.0	rocE	-	-	E	ko:K02205,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
PDAMAKEP_02360	9.1e-294	rocD	2.6.1.13	-	E	ko:K00819	ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130	ko00000,ko00001,ko01000,ko01007	Catalyzes the interconversion of ornithine to glutamate semialdehyde
PDAMAKEP_02361	0.0	rocR	-	-	KT	ko:K06714	-	ko00000,ko03000	COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
PDAMAKEP_02362	1.01e-273	yyxA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PDAMAKEP_02363	1.15e-190	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I
PDAMAKEP_02364	4.01e-199	yycI	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_02365	0.0	yycH	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_02366	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PDAMAKEP_02367	3.43e-171	yycF	-	-	T	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PDAMAKEP_02372	9.32e-255	-	-	-	L	-	-	-	COG3666 Transposase and inactivated derivatives
PDAMAKEP_02373	3.02e-313	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PDAMAKEP_02374	3.81e-71	yycE	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PDAMAKEP_02375	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
PDAMAKEP_02377	1.89e-22	yycC	-	-	K	-	-	-	YycC-like protein
PDAMAKEP_02378	2.83e-281	yycB	-	-	P	ko:K03449	-	ko00000,ko02000	COG2807 Cyanate permease
PDAMAKEP_02379	0.0	ykcB	-	-	M	-	-	-	COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PDAMAKEP_02380	9.16e-95	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	binds to the 23S rRNA
PDAMAKEP_02381	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
PDAMAKEP_02382	1.5e-204	yybS	-	-	S	-	-	-	membrane
PDAMAKEP_02384	6.16e-20	cotF	-	-	M	ko:K06329	-	ko00000	Spore coat protein
PDAMAKEP_02385	1.3e-87	yybR	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_02386	1.4e-209	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	Inorganic pyrophosphatase
PDAMAKEP_02387	2.07e-43	-	-	-	-	-	-	-	-
PDAMAKEP_02388	7e-36	-	-	-	-	-	-	-	-
PDAMAKEP_02390	4.1e-307	yybO	-	-	G	ko:K03535,ko:K08191	-	ko00000,ko02000	COG0477 Permeases of the major facilitator superfamily
PDAMAKEP_02391	1.14e-137	-	-	-	K	-	-	-	TipAS antibiotic-recognition domain
PDAMAKEP_02392	2.79e-181	-	-	-	-	-	-	-	-
PDAMAKEP_02393	3.27e-83	-	-	-	S	-	-	-	SnoaL-like domain
PDAMAKEP_02394	1.72e-156	yybG	-	-	S	-	-	-	Pentapeptide repeat-containing protein
PDAMAKEP_02395	1.94e-130	yybF	-	-	EGP	ko:K08224	-	ko00000,ko02000	COG0477 Permeases of the major facilitator superfamily
PDAMAKEP_02396	3.29e-102	-	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
PDAMAKEP_02397	1.85e-99	yybA	-	-	K	-	-	-	transcriptional
PDAMAKEP_02398	4.18e-90	yjcF	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
PDAMAKEP_02399	1.55e-125	yyaS	-	-	S	ko:K07149	-	ko00000	Membrane
PDAMAKEP_02400	6.59e-88	-	-	-	K	ko:K19273	-	ko00000,ko01000,ko01504	Acetyltransferase (GNAT) domain
PDAMAKEP_02401	0.0	yyaL	-	-	O	ko:K06888	-	ko00000	COG1331 Highly conserved protein containing a thioredoxin domain
PDAMAKEP_02402	2.1e-215	yyaK	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PDAMAKEP_02403	0.0	-	-	-	EGP	ko:K08369	-	ko00000,ko02000	Major facilitator superfamily
PDAMAKEP_02404	6.07e-126	vatD	2.3.1.28, 2.3.1.79	-	S	ko:K00638,ko:K00661,ko:K18234	-	br01600,ko00000,ko01000,ko01504	Bacterial transferase hexapeptide (six repeats)
PDAMAKEP_02405	3.3e-86	yyaH	4.4.1.5	-	E	ko:K01759	ko00620,map00620	ko00000,ko00001,ko01000	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PDAMAKEP_02406	4.83e-227	ccpB	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_02407	9.83e-186	exoA	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
PDAMAKEP_02408	4.25e-49	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PDAMAKEP_02409	1.81e-103	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PDAMAKEP_02410	1.01e-61	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
PDAMAKEP_02411	5.65e-256	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PDAMAKEP_02412	0.0	yyaE	-	-	C	-	-	-	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PDAMAKEP_02413	7.41e-45	yyzM	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_02414	5.34e-227	yyaD	-	-	S	-	-	-	Membrane
PDAMAKEP_02415	3.73e-144	yyaC	-	-	S	-	-	-	Sporulation protein YyaC
PDAMAKEP_02416	3.96e-191	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
PDAMAKEP_02417	1.37e-172	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	COG1192 ATPases involved in chromosome partitioning
PDAMAKEP_02418	8.9e-96	-	-	-	S	-	-	-	Bacterial PH domain
PDAMAKEP_02419	9e-193	noc	-	-	D	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division and chromosome segregation by preventing the formation of the Z ring through the nucleoid, which would cause chromosome breakage
PDAMAKEP_02420	1.01e-167	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of guanine in position 535 of 16S rRNA
PDAMAKEP_02421	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PDAMAKEP_02422	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PDAMAKEP_02423	1.83e-141	jag	-	-	S	ko:K06346	-	ko00000	single-stranded nucleic acid binding R3H
PDAMAKEP_02424	9.29e-179	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PDAMAKEP_02425	5.7e-71	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PDAMAKEP_02426	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PDAMAKEP_02427	9.88e-263	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PDAMAKEP_02428	2.24e-45	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain
PDAMAKEP_02429	4.54e-264	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PDAMAKEP_02430	1.25e-51	yaaB	-	-	S	-	-	-	Domain of unknown function (DUF370)
PDAMAKEP_02431	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDAMAKEP_02432	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDAMAKEP_02433	1.13e-53	-	-	-	S	-	-	-	COG NOG14552 non supervised orthologous group
PDAMAKEP_02436	2.05e-230	yaaC	-	-	S	-	-	-	YaaC-like Protein
PDAMAKEP_02437	0.0	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
PDAMAKEP_02438	7.51e-316	dacA	3.4.16.4	-	M	ko:K01286,ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PDAMAKEP_02439	7.47e-202	pdxS	4.3.3.6	-	H	ko:K06215	ko00750,map00750	ko00000,ko00001,ko01000	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
PDAMAKEP_02440	1.66e-138	pdxT	4.3.3.6	-	H	ko:K08681	ko00750,map00750	ko00000,ko00001,ko01000	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
PDAMAKEP_02441	2.8e-295	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PDAMAKEP_02443	3.72e-159	dck	2.7.1.74, 2.7.1.76	-	F	ko:K15519	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko01000	Deoxycytidine kinase
PDAMAKEP_02444	5.73e-149	dgk	2.7.1.113	-	F	ko:K15518	ko00230,map00230	ko00000,ko00001,ko01000	Deoxyguanosine kinase
PDAMAKEP_02445	2.74e-271	yaaH	-	-	M	ko:K06306	-	ko00000	Glycoside Hydrolase Family
PDAMAKEP_02446	2.3e-124	yaaI	-	-	Q	-	-	-	COG1335 Amidases related to nicotinamidase
PDAMAKEP_02447	1.05e-108	tadA	3.5.4.33	-	FJ	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PDAMAKEP_02448	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PDAMAKEP_02449	1.77e-54	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PDAMAKEP_02450	8.53e-142	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PDAMAKEP_02451	1.55e-42	yaaL	-	-	S	-	-	-	Protein of unknown function (DUF2508)
PDAMAKEP_02452	5.3e-49	bofA	-	-	S	ko:K06317	-	ko00000	Sigma-K factor-processing regulatory protein BofA
PDAMAKEP_02453	1.13e-53	-	-	-	S	-	-	-	COG NOG14552 non supervised orthologous group
PDAMAKEP_02456	2.21e-42	csfB	-	-	S	-	-	-	Inhibitor of sigma-G Gin
PDAMAKEP_02457	3.96e-73	xpaC	-	-	S	-	-	-	5-bromo-4-chloroindolyl phosphate hydrolysis protein
PDAMAKEP_02458	2.92e-259	yaaN	-	-	P	-	-	-	Belongs to the TelA family
PDAMAKEP_02459	0.0	yaaO	-	-	E	-	-	-	Orn Lys Arg decarboxylase
PDAMAKEP_02460	1.34e-145	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PDAMAKEP_02461	1.02e-72	yaaQ	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_02462	1.48e-94	yaaR	-	-	S	ko:K09770	-	ko00000	protein conserved in bacteria
PDAMAKEP_02463	2.42e-236	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
PDAMAKEP_02464	6.33e-189	yaaT	-	-	S	-	-	-	stage 0 sporulation protein
PDAMAKEP_02465	1.53e-56	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
PDAMAKEP_02466	2.81e-178	yabB	2.1.1.223	-	S	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Conserved hypothetical protein 95
PDAMAKEP_02467	4.19e-65	yazA	-	-	L	ko:K07461	-	ko00000	endonuclease containing a URI domain
PDAMAKEP_02468	7.26e-208	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PDAMAKEP_02469	1.51e-58	abrB	-	-	K	ko:K06284	-	ko00000,ko03000	COG2002 Regulators of stationary sporulation gene expression
PDAMAKEP_02470	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PDAMAKEP_02471	1.39e-182	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD
PDAMAKEP_02472	6.79e-277	yabE	-	-	T	-	-	-	protein conserved in bacteria
PDAMAKEP_02473	1.17e-124	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PDAMAKEP_02474	5.04e-199	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PDAMAKEP_02475	6.77e-75	-	-	-	L	-	-	-	COG3666 Transposase and inactivated derivatives
PDAMAKEP_02476	1.11e-198	yabG	-	-	S	ko:K06436	-	ko00000	peptidase
PDAMAKEP_02477	5.32e-53	veg	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_02478	1.28e-35	sspF	-	-	S	ko:K06423	-	ko00000	DNA topological change
PDAMAKEP_02479	2.34e-207	ispE	2.7.1.148	-	I	ko:K00919,ko:K16924	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PDAMAKEP_02480	3.82e-195	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
PDAMAKEP_02481	3.45e-83	yabJ	3.5.99.10	-	J	ko:K09022	-	ko00000,ko01000	translation initiation inhibitor, yjgF family
PDAMAKEP_02482	2.45e-63	spoVG	-	-	D	ko:K06412	-	ko00000	Essential for sporulation. Interferes with or is a negative regulator of the pathway leading to asymmetric septation
PDAMAKEP_02483	4.27e-308	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PDAMAKEP_02484	7.08e-223	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PDAMAKEP_02485	2.77e-125	ctc	-	-	J	ko:K02897	ko03010,map03010	ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PDAMAKEP_02486	2.03e-135	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PDAMAKEP_02487	6.36e-54	yabK	-	-	S	-	-	-	Peptide ABC transporter permease
PDAMAKEP_02488	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PDAMAKEP_02489	5.88e-121	spoVT	-	-	K	ko:K04769	-	ko00000,ko03000	stage V sporulation protein
PDAMAKEP_02490	0.0	yabM	-	-	S	ko:K03328	-	ko00000	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PDAMAKEP_02491	0.0	yabN	3.6.1.66	-	S	ko:K02428,ko:K02499	ko00230,map00230	ko00000,ko00001,ko01000,ko03036	COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like
PDAMAKEP_02492	4.22e-50	yabO	-	-	J	-	-	-	COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
PDAMAKEP_02493	1.91e-66	yabP	-	-	S	-	-	-	Sporulation protein YabP
PDAMAKEP_02494	5.21e-138	yabQ	-	-	S	-	-	-	spore cortex biosynthesis protein
PDAMAKEP_02495	4.18e-75	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
PDAMAKEP_02496	2.49e-82	yabR	-	-	J	ko:K07571	-	ko00000	RNA binding protein (contains ribosomal protein S1 domain)
PDAMAKEP_02499	0.0	spoIIE	3.1.3.16	-	KT	ko:K06382	-	ko00000,ko01000	stage II sporulation protein E
PDAMAKEP_02500	5.61e-168	yabS	-	-	S	ko:K07114	-	ko00000,ko02000	protein containing a von Willebrand factor type A (vWA) domain
PDAMAKEP_02501	1.4e-235	yabT	2.7.11.1	-	KLT	ko:K08884	-	ko00000,ko01000,ko01001	serine threonine protein kinase
PDAMAKEP_02502	0.0	tilS	2.4.2.8, 6.3.4.19	-	D	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PDAMAKEP_02503	4.82e-121	hpt	2.4.2.8, 6.3.4.19	-	F	ko:K00760,ko:K15780	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Belongs to the purine pyrimidine phosphoribosyltransferase family
PDAMAKEP_02504	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PDAMAKEP_02505	6.92e-189	coaX	2.7.1.33	-	F	ko:K03525	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PDAMAKEP_02506	7.84e-207	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PDAMAKEP_02507	4e-203	yacD	5.2.1.8	-	O	ko:K07533	-	ko00000,ko01000,ko03110	peptidyl-prolyl isomerase
PDAMAKEP_02508	1.54e-217	cysK	2.5.1.47	-	E	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
PDAMAKEP_02509	0.0	pabB	2.6.1.85	-	EH	ko:K01665	ko00790,map00790	ko00000,ko00001,ko01000	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PDAMAKEP_02510	5.98e-137	pabA	2.6.1.85	-	EH	ko:K01664	ko00790,map00790	ko00000,ko00001,ko01000	Anthranilate synthase
PDAMAKEP_02511	4.22e-212	pabC	4.1.3.38	-	EH	ko:K02619	ko00790,map00790	ko00000,ko00001,ko01000	4-amino-4-deoxychorismate lyase
PDAMAKEP_02512	3.32e-205	folP	2.5.1.15	-	H	ko:K00796	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PDAMAKEP_02513	3.12e-79	folB	1.13.11.81, 4.1.2.25, 5.1.99.8	-	H	ko:K01633	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PDAMAKEP_02514	4.56e-115	folK	2.7.6.3	-	H	ko:K00950	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
PDAMAKEP_02515	1.81e-41	yazB	-	-	K	-	-	-	transcriptional
PDAMAKEP_02516	1.59e-243	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PDAMAKEP_02517	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
PDAMAKEP_02518	1.13e-53	-	-	-	S	-	-	-	COG NOG14552 non supervised orthologous group
PDAMAKEP_02528	1.13e-53	-	-	-	S	-	-	-	COG NOG14552 non supervised orthologous group
PDAMAKEP_02529	1.76e-99	ctsR	-	-	K	ko:K03708	-	ko00000,ko03000	Belongs to the CtsR family
PDAMAKEP_02530	2.36e-74	mcsA	-	-	S	ko:K19411	-	ko00000	protein with conserved CXXC pairs
PDAMAKEP_02531	7.74e-257	mcsB	2.7.14.1	-	E	ko:K19405	-	ko00000,ko01000	Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity
PDAMAKEP_02532	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Belongs to the ClpA ClpB family
PDAMAKEP_02533	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PDAMAKEP_02534	3.8e-251	disA	2.7.7.85	-	L	ko:K07067	-	ko00000,ko01000	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
PDAMAKEP_02535	1.05e-251	yacL	-	-	S	-	-	-	COG4956 Integral membrane protein (PIN domain superfamily)
PDAMAKEP_02536	1.23e-160	ispD	2.7.7.60	-	I	ko:K00991	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
PDAMAKEP_02537	6.35e-113	ispF	2.7.7.60, 4.6.1.12	-	I	ko:K01770,ko:K12506	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
PDAMAKEP_02538	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PDAMAKEP_02539	1.91e-152	cysE	2.3.1.30	-	E	ko:K00640	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	ko00000,ko00001,ko00002,ko01000	Serine acetyltransferase
PDAMAKEP_02540	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
PDAMAKEP_02541	3.52e-96	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PDAMAKEP_02542	3.52e-173	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDAMAKEP_02543	3.31e-114	yacP	-	-	S	ko:K06962	-	ko00000	RNA-binding protein containing a PIN domain
PDAMAKEP_02544	3.27e-149	sigH	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	Belongs to the sigma-70 factor family
PDAMAKEP_02545	2.65e-32	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PDAMAKEP_02546	1.19e-124	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
PDAMAKEP_02547	3.4e-93	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PDAMAKEP_02548	1.82e-162	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PDAMAKEP_02549	1.64e-103	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PDAMAKEP_02550	2.84e-64	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PDAMAKEP_02551	5.1e-140	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
PDAMAKEP_02552	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDAMAKEP_02553	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDAMAKEP_02554	1.99e-44	rplGB	-	-	J	ko:K07590	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the eukaryotic ribosomal protein eL8 family
PDAMAKEP_02555	6.67e-94	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PDAMAKEP_02556	4.85e-107	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PDAMAKEP_02557	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PDAMAKEP_02558	1.36e-285	tuf	-	-	J	ko:K02358	-	ko00000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PDAMAKEP_02559	8.42e-236	ybaC	-	-	S	-	-	-	Alpha/beta hydrolase family
PDAMAKEP_02560	2.58e-65	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
PDAMAKEP_02561	7.2e-144	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PDAMAKEP_02562	7.43e-136	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
PDAMAKEP_02563	3.27e-58	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PDAMAKEP_02564	2.72e-200	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PDAMAKEP_02565	2.83e-62	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PDAMAKEP_02566	9.23e-71	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PDAMAKEP_02567	5.9e-152	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PDAMAKEP_02568	1.38e-98	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PDAMAKEP_02569	1.88e-35	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
PDAMAKEP_02570	1.64e-52	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PDAMAKEP_02571	7.32e-79	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PDAMAKEP_02572	1.43e-67	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PDAMAKEP_02573	7.72e-122	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PDAMAKEP_02574	1.43e-39	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PDAMAKEP_02575	3.11e-87	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PDAMAKEP_02576	4.47e-121	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PDAMAKEP_02577	2.89e-75	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PDAMAKEP_02578	9.16e-111	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PDAMAKEP_02579	1.59e-33	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
PDAMAKEP_02580	7.32e-95	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	binds to the 23S rRNA
PDAMAKEP_02581	5.7e-298	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PDAMAKEP_02582	2.51e-157	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PDAMAKEP_02583	2.32e-182	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine aminopeptidase
PDAMAKEP_02584	2.92e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PDAMAKEP_02585	2.45e-19	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
PDAMAKEP_02586	1.09e-75	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PDAMAKEP_02587	3.24e-84	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PDAMAKEP_02588	7.01e-217	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDAMAKEP_02589	4.27e-77	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
PDAMAKEP_02590	3.05e-199	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDAMAKEP_02591	2.69e-197	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDAMAKEP_02592	4.39e-175	ecfT	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDAMAKEP_02593	1.51e-182	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PDAMAKEP_02594	1.13e-102	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PDAMAKEP_02595	4.28e-84	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
PDAMAKEP_02596	2.28e-143	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PDAMAKEP_02597	5.1e-79	-	-	-	E	-	-	-	IrrE N-terminal-like domain
PDAMAKEP_02598	4.72e-74	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
PDAMAKEP_02599	1.4e-28	-	-	-	-	-	-	-	-
PDAMAKEP_02600	2.23e-26	-	-	-	-	-	-	-	-
PDAMAKEP_02602	2.65e-30	-	-	-	S	-	-	-	Uncharacterized protein YqaH
PDAMAKEP_02604	1.54e-119	-	-	-	S	-	-	-	DNA protection
PDAMAKEP_02605	4.53e-212	-	-	-	D	-	-	-	AAA domain
PDAMAKEP_02607	8.26e-94	-	-	-	S	-	-	-	Protein of unknown function (DUF669)
PDAMAKEP_02608	0.0	-	-	-	S	ko:K06919	-	ko00000	D5 N terminal like
PDAMAKEP_02610	1.42e-84	-	-	-	-	-	-	-	-
PDAMAKEP_02611	3.41e-125	-	-	-	S	-	-	-	ERCC4 domain
PDAMAKEP_02613	8.69e-106	-	-	-	-	-	-	-	-
PDAMAKEP_02615	2.57e-30	-	-	-	S	-	-	-	YopX protein
PDAMAKEP_02617	1.85e-78	-	-	-	-	-	-	-	-
PDAMAKEP_02618	6.1e-40	-	-	-	-	-	-	-	-
PDAMAKEP_02619	6.88e-66	-	-	-	V	ko:K07451	-	ko00000,ko01000,ko02048	HNH endonuclease
PDAMAKEP_02621	1.65e-98	-	-	-	L	-	-	-	phage terminase small subunit
PDAMAKEP_02622	0.0	-	-	-	S	-	-	-	Terminase
PDAMAKEP_02624	7.82e-299	-	-	-	S	-	-	-	Phage portal protein
PDAMAKEP_02625	8.87e-147	-	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S14 family
PDAMAKEP_02626	1.56e-257	-	-	-	S	-	-	-	capsid protein
PDAMAKEP_02627	2.77e-33	-	-	-	-	-	-	-	-
PDAMAKEP_02628	1.7e-51	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
PDAMAKEP_02629	2.13e-51	-	-	-	S	-	-	-	Phage head-tail joining protein
PDAMAKEP_02630	5.66e-65	-	-	-	S	-	-	-	Bacteriophage HK97-gp10, putative tail-component
PDAMAKEP_02632	3.34e-100	-	-	-	S	-	-	-	Phage tail tube protein
PDAMAKEP_02635	0.0	-	-	-	D	-	-	-	phage tail tape measure protein
PDAMAKEP_02636	6.87e-142	-	-	-	S	-	-	-	Phage tail protein
PDAMAKEP_02637	2.03e-277	acm2	3.2.1.17	-	NU	ko:K01185	-	ko00000,ko01000	Prophage endopeptidase tail
PDAMAKEP_02638	0.0	-	-	-	S	-	-	-	Peptidase_G2, IMC autoproteolytic cleavage domain
PDAMAKEP_02639	7.88e-155	-	-	-	S	-	-	-	Domain of unknown function (DUF2479)
PDAMAKEP_02640	4.07e-38	-	-	-	-	-	-	-	-
PDAMAKEP_02642	1.32e-76	-	-	-	S	-	-	-	Bacteriophage holin family
PDAMAKEP_02643	3.42e-139	-	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	N-acetylmuramoyl-L-alanine amidase
PDAMAKEP_02644	7.4e-97	-	-	-	T	-	-	-	Histidine kinase-like ATPases
PDAMAKEP_02645	1.28e-26	-	-	-	S	-	-	-	STAS-like domain of unknown function (DUF4325)
PDAMAKEP_02647	8.37e-29	-	-	-	S	-	-	-	protein disulfide oxidoreductase activity
PDAMAKEP_02649	1.04e-159	-	-	-	D	ko:K03466	-	ko00000,ko03036	FtsK/SpoIIIE family
PDAMAKEP_02650	1.47e-82	-	-	-	-	-	-	-	-
PDAMAKEP_02652	9.38e-135	-	-	-	K	-	-	-	Helix-turn-helix domain
PDAMAKEP_02653	7.18e-185	ybaJ	-	-	Q	-	-	-	Methyltransferase domain
PDAMAKEP_02654	1.53e-92	ybaK	-	-	S	-	-	-	Protein of unknown function (DUF2521)
PDAMAKEP_02655	3.03e-168	cwlD	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	n-acetylmuramoyl-L-alanine amidase
PDAMAKEP_02656	1.82e-254	mrp	-	-	D	ko:K03593	-	ko00000,ko03029,ko03036	Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
PDAMAKEP_02657	1.04e-122	gerD	-	-	-	ko:K06294	-	ko00000	-
PDAMAKEP_02658	5.95e-133	kbaA	-	-	S	ko:K06349	-	ko00000	Involved in the activation of the KinB signaling pathway of sporulation
PDAMAKEP_02659	4.31e-181	pdaB	-	-	G	-	-	-	Polysaccharide deacetylase
PDAMAKEP_02660	1.13e-53	-	-	-	S	-	-	-	COG NOG14552 non supervised orthologous group
PDAMAKEP_02667	1.13e-53	-	-	-	S	-	-	-	COG NOG14552 non supervised orthologous group
PDAMAKEP_02668	1.56e-08	-	-	-	G	ko:K08174	-	ko00000,ko02000	Major Facilitator Superfamily
PDAMAKEP_02669	0.0	ybaR	-	-	P	ko:K03321	-	ko00000,ko02000	COG0659 Sulfate permease and related transporters (MFS superfamily)
PDAMAKEP_02670	2.34e-203	ybaS	-	-	S	-	-	-	Na -dependent transporter
PDAMAKEP_02671	6.65e-183	ybbA	-	-	S	ko:K07017	-	ko00000	Putative esterase
PDAMAKEP_02672	4.99e-228	feuC	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PDAMAKEP_02673	4.77e-225	feuB	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PDAMAKEP_02674	5.12e-216	feuA	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Iron-uptake system-binding protein
PDAMAKEP_02675	0.0	ybbB	-	-	K	ko:K21701	-	ko00000,ko03000	COG2207 AraC-type DNA-binding domain-containing proteins
PDAMAKEP_02676	1.84e-299	ybbC	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_02677	0.0	ybbD	3.2.1.52	-	G	ko:K01207	ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501	ko00000,ko00001,ko00002,ko01000	Belongs to the glycosyl hydrolase 3 family
PDAMAKEP_02678	0.0	ybbE	3.4.16.4	-	V	ko:K21469	ko00550,map00550	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the UPF0214 family
PDAMAKEP_02679	1.04e-303	ybbF	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PDAMAKEP_02680	3.51e-190	ybbH	-	-	K	-	-	-	transcriptional
PDAMAKEP_02681	1.64e-210	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PDAMAKEP_02682	3.86e-38	ybbJ	-	-	J	-	-	-	acetyltransferase
PDAMAKEP_02683	4.03e-99	ybbK	-	-	S	-	-	-	Protein of unknown function (DUF523)
PDAMAKEP_02689	9.27e-127	sigW	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PDAMAKEP_02690	2.73e-152	rsiW	-	-	K	-	-	-	Is the anti-sigma factor for SigW. The presence of RsiW leads to the inactivation of SigW, and its proteolytic destruction to sigma-W activation
PDAMAKEP_02691	5.43e-189	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PDAMAKEP_02692	4.13e-290	ybbR	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_02693	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PDAMAKEP_02694	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PDAMAKEP_02695	4.24e-217	alkA	3.2.2.21	-	L	ko:K01247,ko:K13529	ko03410,map03410	ko00000,ko00001,ko01000,ko03000,ko03400	COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
PDAMAKEP_02696	2.53e-152	adaA	-	-	K	ko:K13530	-	ko00000,ko01000,ko03000,ko03400	Transcriptional regulator
PDAMAKEP_02697	5.25e-127	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PDAMAKEP_02698	0.0	ndhF	1.6.5.3	-	CP	ko:K05577	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit
PDAMAKEP_02699	0.0	ybcC	-	-	S	ko:K09822	-	ko00000	Belongs to the UPF0753 family
PDAMAKEP_02700	3.85e-120	ybcF	-	-	P	-	-	-	carbonic anhydrase
PDAMAKEP_02702	4.6e-63	-	-	-	-	-	-	-	-
PDAMAKEP_02703	2.96e-79	ybcI	-	-	S	-	-	-	Uncharacterized conserved protein (DUF2294)
PDAMAKEP_02704	9.45e-67	-	-	-	K	-	-	-	Helix-turn-helix domain
PDAMAKEP_02705	1.81e-255	ybcL	-	-	EGP	ko:K08164	-	ko00000,ko02000	COG2814 Arabinose efflux permease
PDAMAKEP_02707	1.27e-245	-	-	-	J	-	-	-	4Fe-4S single cluster domain
PDAMAKEP_02708	0.0	-	-	-	V	ko:K07052	-	ko00000	CAAX protease self-immunity
PDAMAKEP_02709	1.9e-170	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
PDAMAKEP_02710	4.46e-310	skfF	-	-	S	-	-	-	ABC transporter
PDAMAKEP_02711	3.88e-118	-	-	-	C	-	-	-	HEAT repeats
PDAMAKEP_02712	5.88e-103	-	-	-	CO	-	-	-	Thioredoxin-like domain
PDAMAKEP_02713	1.82e-229	-	-	-	S	-	-	-	hydrolases or acyltransferases (alpha beta hydrolase superfamily)
PDAMAKEP_02714	6.9e-158	-	-	-	T	ko:K02483	-	ko00000,ko02022	Transcriptional regulatory protein, C terminal
PDAMAKEP_02715	4.22e-214	-	-	-	T	-	-	-	His Kinase A (phospho-acceptor) domain
PDAMAKEP_02717	1.68e-179	ybdM	2.7.11.1	-	KLT	ko:K08884	-	ko00000,ko01000,ko01001	Protein tyrosine kinase
PDAMAKEP_02718	3.67e-193	ybdN	-	-	-	-	-	-	-
PDAMAKEP_02719	6.05e-272	ybdO	-	-	S	-	-	-	Domain of unknown function (DUF4885)
PDAMAKEP_02720	0.0	ybxG	-	-	E	ko:K03293	-	ko00000	COG1113 Gamma-aminobutyrate permease and related permeases
PDAMAKEP_02721	5.46e-51	csgA	-	-	S	-	-	-	Sigma-G-dependent sporulation-specific SASP protein
PDAMAKEP_02722	6.92e-41	ybxH	-	-	S	-	-	-	Family of unknown function (DUF5370)
PDAMAKEP_02723	5.05e-191	ybxI	3.5.2.6	-	V	ko:K17838	ko01501,map01501	ko00000,ko00001,ko01000	beta-lactamase
PDAMAKEP_02724	2.99e-311	cypC	1.11.2.4	-	Q	ko:K15629	-	ko00000,ko00199,ko01000	Cytochrome P450
PDAMAKEP_02725	1.11e-54	ybyB	-	-	-	-	-	-	-
PDAMAKEP_02726	0.0	ybeC	-	-	E	-	-	-	amino acid
PDAMAKEP_02727	3.33e-209	glpQ	3.1.3.1, 3.1.4.46	-	C	ko:K01113,ko:K01126	ko00564,ko00790,ko01100,ko02020,map00564,map00790,map01100,map02020	ko00000,ko00001,ko00002,ko01000	glycerophosphoryl diester phosphodiesterase
PDAMAKEP_02728	0.0	glpT	-	-	G	ko:K02445	-	ko00000,ko02000	-transporter
PDAMAKEP_02729	1.7e-45	-	-	-	S	-	-	-	Protein of unknown function (DUF2651)
PDAMAKEP_02730	2.35e-215	ybfA	-	-	K	-	-	-	FR47-like protein
PDAMAKEP_02731	7.54e-284	ybfB	-	-	G	-	-	-	COG0477 Permeases of the major facilitator superfamily
PDAMAKEP_02733	0.0	ybfG	-	-	M	-	-	-	Domain of unknown function (DUF1906)
PDAMAKEP_02734	8.85e-96	ybfH	-	-	EG	-	-	-	EamA-like transporter family
PDAMAKEP_02735	1.88e-61	ybfH	-	-	EG	-	-	-	EamA-like transporter family
PDAMAKEP_02736	1.74e-186	ybfI	-	-	K	-	-	-	AraC-like ligand binding domain
PDAMAKEP_02737	6.26e-269	purT	2.1.2.2	-	F	ko:K08289	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PDAMAKEP_02738	1.69e-228	mpr	-	-	M	-	-	-	Belongs to the peptidase S1B family
PDAMAKEP_02740	1.71e-208	-	-	-	S	-	-	-	Alpha/beta hydrolase family
PDAMAKEP_02741	6.9e-124	pssA	2.7.8.8	-	I	ko:K17103	ko00260,ko00564,ko01100,ko01110,map00260,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PDAMAKEP_02742	7.07e-112	ybfM	-	-	S	-	-	-	SNARE associated Golgi protein
PDAMAKEP_02743	2.5e-189	psd	4.1.1.65	-	I	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)
PDAMAKEP_02744	3.88e-60	ybfN	-	-	-	-	-	-	-
PDAMAKEP_02745	9.32e-316	-	-	-	S	ko:K06880	-	ko00000,ko01000,ko01504	Erythromycin esterase
PDAMAKEP_02746	2.35e-244	ybfQ	-	-	S	ko:K07146	-	ko00000	Belongs to the UPF0176 family
PDAMAKEP_02747	6.04e-273	gltP	-	-	C	ko:K11102	-	ko00000,ko02000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PDAMAKEP_02748	0.0	ptsG	2.7.1.199	-	G	ko:K02763,ko:K02764,ko:K02765,ko:K20116,ko:K20117,ko:K20118	ko00010,ko00520,ko02060,map00010,map00520,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PDAMAKEP_02749	1.23e-173	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PDAMAKEP_02750	5.79e-165	-	-	-	K	ko:K03710,ko:K10711	-	ko00000,ko03000	UTRA
PDAMAKEP_02752	1.52e-259	ilvE	2.6.1.42	-	E	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Branched-chain amino acid aminotransferase
PDAMAKEP_02753	0.0	ybgF	-	-	E	ko:K02205,ko:K03293,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
PDAMAKEP_02754	6.14e-232	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine
PDAMAKEP_02756	0.0	agcS	-	-	E	ko:K03310,ko:K11626	ko02020,map02020	ko00000,ko00001	Sodium alanine symporter
PDAMAKEP_02757	1.03e-236	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
PDAMAKEP_02758	6.07e-51	glnJ	2.7.13.3	-	T	ko:K07717	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PDAMAKEP_02759	4.72e-43	glnJ	2.7.13.3	-	T	ko:K07717	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PDAMAKEP_02760	2.44e-23	glnJ	2.7.13.3	-	T	ko:K07717	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PDAMAKEP_02761	4.97e-102	glnJ	2.7.13.3	-	T	ko:K07717	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PDAMAKEP_02762	3.33e-215	glnL	-	-	T	ko:K07719	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Regulator
PDAMAKEP_02763	7.94e-220	ycbC	4.2.1.41	-	EM	ko:K01707	ko00053,ko01100,map00053,map01100	ko00000,ko00001,ko01000	5-dehydro-4-deoxyglucarate dehydratase activity
PDAMAKEP_02764	0.0	ycbD	-	-	C	ko:K22187	ko00040,map00040	ko00000,ko00001,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PDAMAKEP_02765	5.05e-60	gudP	-	-	G	ko:K03535,ko:K08191	-	ko00000,ko02000	COG0477 Permeases of the major facilitator superfamily
PDAMAKEP_02766	9.33e-200	gudP	-	-	G	ko:K03535,ko:K08191	-	ko00000,ko02000	COG0477 Permeases of the major facilitator superfamily
PDAMAKEP_02767	0.0	gudD	4.2.1.40	-	M	ko:K01706	ko00053,ko01100,map00053,map01100	ko00000,ko00001,ko01000	Belongs to the mandelate racemase muconate lactonizing enzyme family
PDAMAKEP_02768	7.68e-160	ycbG	-	-	K	ko:K05799	-	ko00000,ko03000	FCD
PDAMAKEP_02769	1.58e-84	garD	4.2.1.42, 4.2.1.7	-	G	ko:K01685,ko:K01708	ko00040,ko00053,ko01100,map00040,map00053,map01100	ko00000,ko00001,ko00002,ko01000	Altronate
PDAMAKEP_02770	8.78e-96	garD	4.2.1.42, 4.2.1.7	-	G	ko:K01685,ko:K01708	ko00040,ko00053,ko01100,map00040,map00053,map01100	ko00000,ko00001,ko00002,ko01000	Altronate
PDAMAKEP_02771	4.69e-122	ycbJ	-	-	S	ko:K06979	-	br01600,ko00000,ko00002,ko01504	Macrolide 2'-phosphotransferase
PDAMAKEP_02772	1.92e-67	ycbJ	-	-	S	ko:K06979	-	br01600,ko00000,ko00002,ko01504	Macrolide 2'-phosphotransferase
PDAMAKEP_02773	8.73e-33	rtpA	-	-	K	-	-	-	Tryptophan RNA-binding attenuator protein inhibitory protein
PDAMAKEP_02774	2.44e-216	eamA1	-	-	EG	-	-	-	spore germination
PDAMAKEP_02775	9.12e-161	ycbL	-	-	T	ko:K02483	-	ko00000,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PDAMAKEP_02776	3.69e-99	ycbM	-	-	T	-	-	-	Histidine kinase
PDAMAKEP_02777	1.25e-98	ycbM	-	-	T	-	-	-	Histidine kinase
PDAMAKEP_02778	9.59e-216	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PDAMAKEP_02779	4.75e-147	-	-	-	S	-	-	-	ABC-2 family transporter protein
PDAMAKEP_02780	2.48e-73	ycbP	-	-	S	-	-	-	Protein of unknown function (DUF2512)
PDAMAKEP_02781	2.05e-99	cwlJ	3.5.1.28	-	M	ko:K01449	-	ko00000,ko01000	Cell wall
PDAMAKEP_02782	3.38e-06	-	-	-	K	ko:K03088	-	ko00000,ko03021	RNA polymerase sigma factor
PDAMAKEP_02783	6.43e-65	XK27_07210	-	-	S	-	-	-	B3/4 domain
PDAMAKEP_02785	5.42e-11	-	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PDAMAKEP_02786	6.95e-51	-	-	-	S	ko:K07006	-	ko00000	flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase
PDAMAKEP_02787	1.56e-42	-	-	-	S	-	-	-	CGNR zinc finger
PDAMAKEP_02788	2.71e-09	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartate-semialdehyde dehydrogenase family
PDAMAKEP_02789	3.21e-305	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PDAMAKEP_02790	1.1e-110	-	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	aspartate-semialdehyde dehydrogenase
PDAMAKEP_02791	1.78e-152	-	-	-	E	ko:K16263	-	ko00000,ko02000	Amino acid permease
PDAMAKEP_02792	3.41e-102	-	-	-	I	-	-	-	Fatty acid desaturase
PDAMAKEP_02793	6.05e-103	-	-	-	S	-	-	-	Protein of unknown function (DUF444)
PDAMAKEP_02794	1.64e-56	argG	6.3.4.5	-	E	ko:K01940	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418	ko00000,ko00001,ko00002,ko01000,ko04147	argininosuccinate synthase activity
PDAMAKEP_02795	2.09e-116	metB	2.5.1.48	-	E	ko:K01739	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Cys/Met metabolism PLP-dependent enzyme
PDAMAKEP_02796	1.59e-65	-	-	-	L	-	-	-	Transposase
PDAMAKEP_02797	3.17e-176	-	-	-	L	ko:K07497	-	ko00000	COG2801 Transposase and inactivated derivatives
PDAMAKEP_02798	1.31e-12	-	2.5.1.48, 4.4.1.11, 4.4.1.8	-	E	ko:K01739,ko:K01760,ko:K01761,ko:K10764	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	PFAM Cys Met metabolism pyridoxal-phosphate-dependent protein
PDAMAKEP_02799	3.17e-176	-	-	-	L	ko:K07497	-	ko00000	COG2801 Transposase and inactivated derivatives
PDAMAKEP_02800	1.59e-65	-	-	-	L	-	-	-	Transposase
PDAMAKEP_02801	4.37e-22	argO	-	-	S	ko:K06895	-	ko00000,ko02000	LysE type translocator
PDAMAKEP_02802	9.39e-246	-	-	-	K	ko:K18907	-	ko00000,ko00002,ko01504,ko03000	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PDAMAKEP_02803	1.75e-83	ycbR	-	-	T	-	-	-	vWA found in TerF C terminus
PDAMAKEP_02804	1.5e-55	ycbR	-	-	T	-	-	-	vWA found in TerF C terminus
PDAMAKEP_02805	0.0	phoD	3.1.3.1	-	P	ko:K01113	ko00790,ko01100,ko02020,map00790,map01100,map02020	ko00000,ko00001,ko00002,ko01000	COG3540 Phosphodiesterase alkaline phosphatase D
PDAMAKEP_02806	3.12e-38	tatAD	-	-	U	ko:K03116	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
PDAMAKEP_02807	1.26e-158	tatC	-	-	U	ko:K03118	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PDAMAKEP_02808	2.94e-155	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PDAMAKEP_02809	1.98e-258	ycbU	-	-	E	-	-	-	Selenocysteine lyase
PDAMAKEP_02810	1.38e-299	lmrB	-	-	EGP	ko:K18926	-	ko00000,ko00002,ko02000	the major facilitator superfamily
PDAMAKEP_02811	7.64e-131	lmrA	-	-	K	ko:K18939	-	ko00000,ko00002,ko03000	Transcriptional regulator
PDAMAKEP_02812	2.3e-255	ansB	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D
PDAMAKEP_02813	4.67e-146	-	3.1.1.3	-	S	ko:K01046	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko00002,ko01000	acetyltransferases and hydrolases with the alpha beta hydrolase fold
PDAMAKEP_02814	6.61e-73	-	-	-	S	-	-	-	RDD family
PDAMAKEP_02815	5.86e-254	yccF	-	-	K	ko:K07039	-	ko00000	SEC-C motif
PDAMAKEP_02816	1.25e-212	natK	2.7.13.3	-	T	ko:K11640	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
PDAMAKEP_02817	1.71e-121	natR	-	-	T	ko:K02477,ko:K11641	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
PDAMAKEP_02818	1.18e-249	-	-	-	CP	ko:K09696	ko02010,ko02020,map02010,map02020	ko00000,ko00001,ko00002,ko02000	ABC-2 family transporter protein
PDAMAKEP_02819	4.6e-220	yccK	-	-	C	-	-	-	Aldo keto reductase
PDAMAKEP_02820	3.53e-226	ycdA	-	-	S	-	-	-	Domain of unknown function (DUF5105)
PDAMAKEP_02821	0.0	ycdB	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PDAMAKEP_02822	0.0	ycdC	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PDAMAKEP_02823	2.65e-123	-	-	-	M	ko:K17733	-	ko00000,ko01000,ko01002,ko01011	D-alanyl-D-alanine carboxypeptidase
PDAMAKEP_02824	1.65e-247	rapJ	-	-	S	ko:K06368	-	ko00000,ko01000	Response regulator aspartate phosphatase
PDAMAKEP_02825	7.67e-177	-	1.1.1.47	-	IQ	ko:K00034	ko00030,ko01120,ko01200,map00030,map01120,map01200	ko00000,ko00001,ko01000	Enoyl-(Acyl carrier protein) reductase
PDAMAKEP_02826	0.0	malL	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	COG0366 Glycosidases
PDAMAKEP_02827	2.27e-220	adcA	-	-	P	ko:K09815	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
PDAMAKEP_02828	2.32e-169	adcC	-	-	P	ko:K02074,ko:K09817	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	'COG1121 ABC-type Mn Zn transport systems, ATPase component'
PDAMAKEP_02829	1.88e-172	adcB	-	-	P	ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1108 ABC-type Mn2 Zn2 transport systems, permease components
PDAMAKEP_02830	3.85e-234	yceB	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PDAMAKEP_02831	1.26e-139	yceC	3.5.4.33	-	T	ko:K11991	-	ko00000,ko01000,ko03016	proteins involved in stress response, homologs of TerZ and
PDAMAKEP_02832	8.9e-137	yceD	-	-	T	ko:K05795	-	ko00000	proteins involved in stress response, homologs of TerZ and
PDAMAKEP_02833	4.97e-138	yceE	-	-	T	ko:K05795	-	ko00000	proteins involved in stress response, homologs of TerZ and
PDAMAKEP_02834	1.18e-175	yceF	-	-	P	ko:K05794	-	ko00000	Protein of unknown function (DUF475)
PDAMAKEP_02835	0.0	yceG	-	-	S	-	-	-	Putative component of 'biosynthetic module'
PDAMAKEP_02836	1.71e-244	yceH	-	-	P	-	-	-	Belongs to the TelA family
PDAMAKEP_02837	2.21e-106	yceI	-	-	P	ko:K08369	-	ko00000,ko02000	Uncharacterised MFS-type transporter YbfB
PDAMAKEP_02838	6.55e-133	yceI	-	-	P	ko:K08369	-	ko00000,ko02000	Uncharacterised MFS-type transporter YbfB
PDAMAKEP_02839	4.3e-260	-	-	-	EGP	-	-	-	Uncharacterised MFS-type transporter YbfB
PDAMAKEP_02840	4.82e-61	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
PDAMAKEP_02841	1.81e-292	opuAA	3.6.3.32	-	E	ko:K02000	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	glycine betaine
PDAMAKEP_02842	2.1e-186	opuAB	-	-	P	ko:K02001	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	glycine betaine
PDAMAKEP_02843	1.16e-209	opuAC	-	-	E	ko:K02001,ko:K02002	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	glycine betaine
PDAMAKEP_02844	3.26e-275	amhX	-	-	S	ko:K14665	-	ko00000,ko01000,ko01002	amidohydrolase
PDAMAKEP_02845	0.0	ycgA	-	-	S	-	-	-	Membrane
PDAMAKEP_02846	6.61e-37	ycgB	-	-	-	-	-	-	-
PDAMAKEP_02847	0.0	amyE	3.2.1.1	GH13	G	ko:K01176	ko00500,ko01100,ko04973,map00500,map01100,map04973	ko00000,ko00001,ko01000	alpha-amylase
PDAMAKEP_02848	1.31e-121	amyE	3.2.1.1	GH13	G	ko:K01176	ko00500,ko01100,ko04973,map00500,map01100,map04973	ko00000,ko00001,ko01000	alpha-amylase
PDAMAKEP_02849	2.93e-233	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
PDAMAKEP_02850	0.0	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
PDAMAKEP_02851	3.44e-191	yqcI	-	-	S	ko:K09190	-	ko00000	YqcI/YcgG family
PDAMAKEP_02852	5.56e-88	ycgH	-	-	E	ko:K03293	-	ko00000	COG1113 Gamma-aminobutyrate permease and related permeases
PDAMAKEP_02853	1.36e-79	ycgH	-	-	E	ko:K03293	-	ko00000	COG1113 Gamma-aminobutyrate permease and related permeases
PDAMAKEP_02854	5.98e-120	ycgI	-	-	S	ko:K09967	-	ko00000	Domain of unknown function (DUF1989)
PDAMAKEP_02855	5.24e-191	nadE	6.3.1.5	-	H	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PDAMAKEP_02856	3.46e-136	tmrB	-	-	S	-	-	-	AAA domain
PDAMAKEP_02857	4.28e-136	aroK	2.7.1.71	-	F	ko:K00891	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PDAMAKEP_02858	1.45e-183	-	-	-	Q	-	-	-	ubiE/COQ5 methyltransferase family
PDAMAKEP_02859	2.05e-230	ycgK	-	-	K	ko:K04761	ko02026,map02026	ko00000,ko00001,ko03000	LysR substrate binding domain
PDAMAKEP_02860	6.64e-233	cah	3.1.1.41	-	Q	ko:K01060	ko00311,ko01130,map00311,map01130	ko00000,ko00001,ko01000	Acetyl xylan esterase (AXE1)
PDAMAKEP_02861	7.76e-187	ycgL	-	-	S	ko:K07074	-	ko00000	Predicted nucleotidyltransferase
PDAMAKEP_02862	3.63e-218	ycgM	-	-	E	ko:K00318	ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130	ko00000,ko00001,ko01000	Proline dehydrogenase
PDAMAKEP_02863	0.0	rocA	1.2.1.88	-	C	ko:K00294	ko00250,ko00330,ko01100,map00250,map00330,map01100	ko00000,ko00001,ko01000	Belongs to the aldehyde dehydrogenase family. RocA subfamily
PDAMAKEP_02864	0.0	putP	-	-	E	ko:K11928	-	ko00000,ko02000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PDAMAKEP_02865	3.92e-288	ycgP	-	-	QT	-	-	-	COG2508 Regulator of polyketide synthase expression
PDAMAKEP_02866	7.72e-195	ycgQ	-	-	S	ko:K08986	-	ko00000	membrane
PDAMAKEP_02867	3.19e-187	ycgR	-	-	S	ko:K07089	-	ko00000	permeases
PDAMAKEP_02868	4.73e-203	ycgS	-	-	I	-	-	-	alpha/beta hydrolase fold
PDAMAKEP_02869	1.93e-241	ycgT	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
PDAMAKEP_02870	0.0	nasF	2.1.1.107, 4.2.1.75	-	H	ko:K13542	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the precorrin methyltransferase family
PDAMAKEP_02871	1.2e-74	nasE	1.7.1.15	-	P	ko:K00363	ko00910,ko01120,map00910,map01120	ko00000,ko00001,ko00002,ko01000	Nitrite reductase
PDAMAKEP_02872	0.0	nasD	1.7.1.15	-	C	ko:K00362	ko00910,ko01120,map00910,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
PDAMAKEP_02873	3.71e-292	nasC	-	-	C	ko:K00372	ko00910,ko01120,map00910,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PDAMAKEP_02874	1.04e-173	nasC	-	-	C	ko:K00372	ko00910,ko01120,map00910,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PDAMAKEP_02875	0.0	nasB	1.7.1.15	-	C	ko:K00362	ko00910,ko01120,map00910,map01120	ko00000,ko00001,ko00002,ko01000	Assimilatory nitrate reductase (electron transfer subunit)
PDAMAKEP_02876	1.11e-282	nasA	-	-	P	ko:K02575	ko00910,map00910	ko00000,ko00001,ko00002,ko02000	COG2223 Nitrate nitrite transporter
PDAMAKEP_02877	2.47e-221	folE2	3.5.4.16	-	S	ko:K09007	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Converts GTP to 7,8-dihydroneopterin triphosphate
PDAMAKEP_02878	1.47e-131	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
PDAMAKEP_02879	2.72e-141	yciC	-	-	S	-	-	-	GTPases (G3E family)
PDAMAKEP_02880	2.26e-123	yciC	-	-	S	-	-	-	GTPases (G3E family)
PDAMAKEP_02881	1.22e-148	yckA	-	-	P	ko:K10009	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0765 ABC-type amino acid transport system, permease component
PDAMAKEP_02882	1.03e-184	yckB	-	-	ET	ko:K02030,ko:K02424	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko02035	COG0834 ABC-type amino acid transport signal transduction systems, periplasmic component domain
PDAMAKEP_02884	4.37e-56	yckC	-	-	S	-	-	-	membrane
PDAMAKEP_02885	1.01e-68	yckD	-	-	S	-	-	-	Protein of unknown function (DUF2680)
PDAMAKEP_02886	0.0	yckE	3.2.1.21, 3.2.1.86	GT1	G	ko:K01223,ko:K05350	ko00010,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PDAMAKEP_02887	4.78e-91	nin	-	-	S	-	-	-	Competence protein J (ComJ)
PDAMAKEP_02888	7.94e-100	nucA	-	-	M	-	-	-	Deoxyribonuclease NucA/NucB
PDAMAKEP_02889	1.71e-72	tlpC	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis protein
PDAMAKEP_02890	9.46e-163	tlpC	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis protein
PDAMAKEP_02891	1.32e-125	hxlB	5.3.1.27	-	G	ko:K08094	ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	SIS domain
PDAMAKEP_02892	9.34e-136	hxlA	4.1.2.43	-	G	ko:K08093	ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	3-hexulose-6-phosphate synthase
PDAMAKEP_02893	7.08e-85	hxlR	-	-	K	-	-	-	transcriptional
PDAMAKEP_02894	0.0	srfAA	-	-	Q	ko:K15654,ko:K15655,ko:K16119	ko01054,ko02024,map01054,map02024	ko00000,ko00001,ko01008	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PDAMAKEP_02895	0.0	srfAB	-	-	Q	ko:K15654,ko:K15655,ko:K16120	ko01054,ko02024,map01054,map02024	ko00000,ko00001,ko01008	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PDAMAKEP_02896	0.0	srfAC	-	-	Q	ko:K15656,ko:K16121	ko01054,ko02024,map01054,map02024	ko00000,ko00001,ko01008	COG1020 Non-ribosomal peptide synthetase modules and related proteins
PDAMAKEP_02897	2.71e-178	srfAD	-	-	Q	ko:K15657	ko02024,map02024	ko00000,ko00001,ko01008	thioesterase
PDAMAKEP_02898	2.09e-286	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PDAMAKEP_02899	3.11e-124	-	-	-	S	-	-	-	YcxB-like protein
PDAMAKEP_02900	4.44e-203	ycxC	-	-	EG	-	-	-	EamA-like transporter family
PDAMAKEP_02901	0.0	ycxD	-	-	K	-	-	-	GntR family transcriptional regulator
PDAMAKEP_02902	1.37e-144	sfp	-	-	H	ko:K06133	ko00770,map00770	ko00000,ko00001,ko01000	Belongs to the P-Pant transferase superfamily
PDAMAKEP_02903	1.24e-147	yczE	-	-	S	ko:K07149	-	ko00000	membrane
PDAMAKEP_02904	4.11e-171	tcyC	-	-	E	ko:K10010	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1126 ABC-type polar amino acid transport system, ATPase component
PDAMAKEP_02905	4.6e-157	tcyB	-	-	P	ko:K10009	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0765 ABC-type amino acid transport system, permease component
PDAMAKEP_02906	4.13e-186	tcyA	-	-	ET	ko:K02424	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko02035	Belongs to the bacterial solute-binding protein 3 family
PDAMAKEP_02907	6.75e-187	yclA	-	-	K	ko:K21755	-	ko00000,ko03000	LysR substrate binding domain
PDAMAKEP_02908	3.01e-11	ubiX	2.5.1.129	-	H	ko:K03186	ko00130,ko00627,ko00940,ko01100,ko01110,ko01120,ko01220,map00130,map00627,map00940,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
PDAMAKEP_02909	6.42e-201	yclE	3.4.11.5	-	S	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Alpha beta hydrolase
PDAMAKEP_02910	0.0	dtpT	-	-	E	ko:K03305	-	ko00000	amino acid peptide transporter
PDAMAKEP_02911	0.0	yclG	-	-	M	-	-	-	Pectate lyase superfamily protein
PDAMAKEP_02913	0.0	gerKA	-	-	EG	ko:K06295,ko:K06307	-	ko00000	Spore germination protein
PDAMAKEP_02914	1.22e-289	gerKC	-	-	S	ko:K06297	-	ko00000	spore germination
PDAMAKEP_02915	4.24e-250	gerKB	-	-	F	ko:K06296	-	ko00000,ko02000	Spore germination protein
PDAMAKEP_02916	1.18e-155	yclH	-	-	P	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
PDAMAKEP_02917	2.59e-274	yclI	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter (permease) YclI
PDAMAKEP_02918	2.23e-165	yclJ	-	-	T	ko:K02483	-	ko00000,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PDAMAKEP_02919	0.0	yclK	-	-	T	-	-	-	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PDAMAKEP_02920	3.09e-97	rapA1	-	-	S	ko:K06359,ko:K06361	ko02024,map02024	ko00000,ko00001,ko01000	aspartate phosphatase
PDAMAKEP_02922	6.5e-05	-	-	-	S	-	-	-	Protein of unknown function (Tiny_TM_bacill)
PDAMAKEP_02923	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
PDAMAKEP_02924	1.09e-205	yclN	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PDAMAKEP_02925	4.69e-211	yclO	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PDAMAKEP_02926	2.29e-175	yclP	3.6.3.34	-	P	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PDAMAKEP_02927	1.91e-211	yclQ	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG4607 ABC-type enterochelin transport system, periplasmic component
PDAMAKEP_02928	0.0	ycnB	-	-	EGP	-	-	-	the major facilitator superfamily
PDAMAKEP_02929	3.4e-197	ycnC	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_02930	2.48e-173	-	1.5.1.39	-	C	ko:K10678,ko:K19286	ko00633,ko00740,ko01100,ko01120,map00633,map00740,map01100,map01120	ko00000,ko00001,ko01000	Oxidoreductase
PDAMAKEP_02931	1.68e-60	ycnE	-	-	S	-	-	-	Monooxygenase
PDAMAKEP_02932	1.54e-67	yczG	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
PDAMAKEP_02933	0.0	gabR	-	-	K	ko:K00375	-	ko00000,ko03000	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PDAMAKEP_02934	6.58e-311	gabT	2.6.1.19, 2.6.1.22	-	E	ko:K00823,ko:K07250	ko00250,ko00280,ko00410,ko00640,ko00650,ko01100,ko01120,map00250,map00280,map00410,map00640,map00650,map01100,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PDAMAKEP_02935	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PDAMAKEP_02936	1.67e-190	glcU	-	-	U	ko:K05340	-	ko00000,ko02000	Glucose uptake
PDAMAKEP_02937	1.39e-185	gdh	1.1.1.47	-	IQ	ko:K00034	ko00030,ko01120,ko01200,map00030,map01120,map01200	ko00000,ko00001,ko01000	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PDAMAKEP_02938	1.34e-132	ycnI	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_02939	0.0	ycnJ	-	-	P	ko:K14166	-	ko00000,ko02000	protein, homolog of Cu resistance protein CopC
PDAMAKEP_02940	2.03e-136	ycnK	-	-	K	ko:K21601	-	ko00000,ko03000	COG1349 Transcriptional regulators of sugar metabolism
PDAMAKEP_02941	4.67e-75	-	-	-	-	-	-	-	-
PDAMAKEP_02942	0.0	mtlA	2.7.1.197	-	G	ko:K02799,ko:K02800	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG2213 Phosphotransferase system, mannitol-specific IIBC component
PDAMAKEP_02943	8.3e-95	mtlF	2.7.1.197	-	G	ko:K02798	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG4668 Mannitol fructose-specific phosphotransferase system, IIA domain
PDAMAKEP_02944	1.72e-265	mtlD	1.1.1.17	-	G	ko:K00009	ko00051,map00051	ko00000,ko00001,ko01000	COG0246 Mannitol-1-phosphate altronate dehydrogenases
PDAMAKEP_02945	5.86e-256	ycsA	1.1.1.83, 1.1.1.93, 4.1.1.73	-	CE	ko:K07246	ko00630,ko00650,map00630,map00650	ko00000,ko00001,ko01000	Tartrate dehydrogenase
PDAMAKEP_02947	9.86e-94	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PDAMAKEP_02948	6.98e-143	-	-	-	Q	-	-	-	COG0412 Dienelactone hydrolase and related enzymes
PDAMAKEP_02949	1.89e-87	ycsD	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	FabA-like domain
PDAMAKEP_02950	3.26e-72	-	-	-	L	-	-	-	transposase activity
PDAMAKEP_02951	2.88e-186	-	-	-	L	ko:K07497	-	ko00000	Molecular Function DNA binding, Biological Process DNA recombination
PDAMAKEP_02952	3.21e-305	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PDAMAKEP_02954	1.9e-177	ycsE	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sucrose-6F-phosphate phosphohydrolase
PDAMAKEP_02955	3.82e-181	ycsF	-	-	S	ko:K07160	-	ko00000	Belongs to the UPF0271 (lamB) family
PDAMAKEP_02956	2.78e-273	ycsG	-	-	P	-	-	-	COG1914 Mn2 and Fe2 transporters of the NRAMP family
PDAMAKEP_02957	7e-190	ycsI	-	-	S	-	-	-	Belongs to the D-glutamate cyclase family
PDAMAKEP_02958	1.19e-171	kipI	-	-	E	ko:K06351	-	ko00000	Allophanate hydrolase subunit 1
PDAMAKEP_02959	9.08e-235	kipA	-	-	E	ko:K06350	-	ko00000	Allophanate hydrolase subunit 2
PDAMAKEP_02960	6.3e-170	kipR	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_02961	9.86e-153	ycsK	-	-	E	-	-	-	anatomical structure formation involved in morphogenesis
PDAMAKEP_02963	3.25e-43	yczJ	-	-	S	-	-	-	biosynthesis
PDAMAKEP_02964	2.33e-08	yczJ	-	-	S	-	-	-	biosynthesis
PDAMAKEP_02965	0.0	pbpC	3.4.16.4	-	M	ko:K02545,ko:K21467	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko00002,ko01000,ko01011,ko01504	Penicillin-binding Protein
PDAMAKEP_02966	8.25e-218	ycsN	-	-	S	-	-	-	Oxidoreductase
PDAMAKEP_02967	0.0	mtlR	-	-	K	ko:K03483	-	ko00000,ko03000	transcriptional regulator, MtlR
PDAMAKEP_02968	0.0	ydaB	-	-	IQ	-	-	-	acyl-CoA ligase
PDAMAKEP_02969	5.81e-127	ydaC	-	-	Q	-	-	-	Methyltransferase domain
PDAMAKEP_02970	4.37e-206	ydaD	-	-	IQ	-	-	-	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PDAMAKEP_02971	2.36e-126	ydaE	5.3.1.15	-	S	ko:K09988	ko00040,map00040	ko00000,ko00001,ko01000	Cupin 2, conserved barrel domain protein
PDAMAKEP_02972	3.02e-130	ydaF	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
PDAMAKEP_02973	1.14e-97	ydaG	-	-	S	-	-	-	general stress protein
PDAMAKEP_02974	2.18e-177	amj	-	-	U	-	-	-	Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane
PDAMAKEP_02975	1.05e-59	ydzA	-	-	EGP	-	-	-	Domain of unknown function (DUF3817)
PDAMAKEP_02976	3.95e-98	lrpC	-	-	K	ko:K03719	-	ko00000,ko03000,ko03036	Transcriptional regulator
PDAMAKEP_02977	0.0	topB	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PDAMAKEP_02978	2.43e-264	ydaJ	-	-	M	-	-	-	Belongs to the glycosyl hydrolase 8 (cellulase D) family
PDAMAKEP_02979	7.07e-115	ydaK	-	-	T	-	-	-	Diguanylate cyclase, GGDEF domain
PDAMAKEP_02980	9.49e-39	ydaK	-	-	T	-	-	-	Diguanylate cyclase, GGDEF domain
PDAMAKEP_02981	2.78e-164	ydaL	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2334)
PDAMAKEP_02982	4.3e-221	ydaL	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2334)
PDAMAKEP_02983	1.93e-304	ydaM	-	-	M	-	-	-	Glycosyl transferase family group 2
PDAMAKEP_02984	7.66e-234	ydaN	-	-	S	-	-	-	Bacterial cellulose synthase subunit
PDAMAKEP_02985	7.26e-237	ydaN	-	-	S	-	-	-	Bacterial cellulose synthase subunit
PDAMAKEP_02986	0.0	ydaO	-	-	E	-	-	-	amino acid
PDAMAKEP_02987	4.05e-98	mutT	3.6.1.55	-	L	ko:K03574	-	ko00000,ko01000,ko03400	Belongs to the Nudix hydrolase family
PDAMAKEP_02988	0.0	ydaP	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
PDAMAKEP_02989	8.72e-53	-	-	-	-	-	-	-	-
PDAMAKEP_02990	3.9e-286	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
PDAMAKEP_02991	1.67e-42	ydaS	-	-	S	-	-	-	membrane
PDAMAKEP_02992	4.22e-99	ydaT	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2188)
PDAMAKEP_02993	4.3e-190	ydbA	-	-	P	-	-	-	EcsC protein family
PDAMAKEP_02994	1.83e-09	gsiB	-	-	S	ko:K06884	-	ko00000	general stress protein
PDAMAKEP_02995	3.09e-78	ydbB	-	-	G	-	-	-	Cupin domain
PDAMAKEP_02996	1.49e-81	ydbC	-	-	S	-	-	-	Domain of unknown function (DUF4937
PDAMAKEP_02997	2.15e-195	ydbD	-	-	P	ko:K07217	-	ko00000	Catalase
PDAMAKEP_02998	1.23e-251	dctB	-	-	G	-	-	-	COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component
PDAMAKEP_02999	0.0	dctS	2.7.13.3	-	T	ko:K11614,ko:K11637,ko:K11691	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Signal transduction histidine kinase regulating citrate malate metabolism
PDAMAKEP_03000	3.39e-155	dctR	-	-	T	ko:K02475,ko:K11692	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG4565 Response regulator of citrate malate metabolism
PDAMAKEP_03001	5.16e-289	dctA	-	-	U	ko:K03309,ko:K11102,ko:K11103	ko02020,map02020	ko00000,ko00001,ko02000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PDAMAKEP_03002	5.38e-230	ydbI	-	-	S	-	-	-	AI-2E family transporter
PDAMAKEP_03003	5.36e-218	ydbJ	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PDAMAKEP_03004	8.57e-159	ydbK	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
PDAMAKEP_03005	3.8e-69	ydbL	-	-	-	-	-	-	-
PDAMAKEP_03006	5.03e-278	ydbM	-	-	I	-	-	-	acyl-CoA dehydrogenase
PDAMAKEP_03007	1.49e-26	-	-	-	S	-	-	-	Fur-regulated basic protein B
PDAMAKEP_03009	2.72e-202	yeaB	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PDAMAKEP_03010	4.19e-75	ydbP	-	-	CO	-	-	-	Thioredoxin
PDAMAKEP_03011	4.18e-256	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
PDAMAKEP_03012	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PDAMAKEP_03013	0.0	cshA	3.6.4.13	-	JKL	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PDAMAKEP_03014	2.12e-107	ydbS	-	-	S	ko:K09167	-	ko00000	Bacterial PH domain
PDAMAKEP_03015	0.0	ydbT	-	-	S	ko:K08981	-	ko00000	Membrane
PDAMAKEP_03016	1.47e-138	ydcA	-	-	S	-	-	-	membrane protein (homolog of Drosophila rhomboid)
PDAMAKEP_03017	1.32e-76	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PDAMAKEP_03018	1.9e-233	ydcC	-	-	M	-	-	-	COG2834 Outer membrane lipoprotein-sorting protein
PDAMAKEP_03019	7.21e-282	alr	5.1.1.1, 5.1.1.5	-	E	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PDAMAKEP_03020	9.49e-57	ndoAI	-	-	K	ko:K07723	-	ko00000,ko02048,ko03000	transcriptional regulators containing the CopG Arc MetJ DNA-binding domain and a metal-binding domain
PDAMAKEP_03021	4.34e-75	ndoA	-	-	L	ko:K07171	-	ko00000,ko01000,ko02048	Toxic component of a toxin-antitoxin (TA) module
PDAMAKEP_03022	8.58e-184	rsbR	-	-	T	ko:K17763	-	ko00000,ko03021	Positive regulator of sigma-B
PDAMAKEP_03023	1.8e-74	rsbS	-	-	T	ko:K17762	-	ko00000,ko03021	antagonist
PDAMAKEP_03024	2.45e-89	rsbT	2.7.11.1	-	T	ko:K17752	-	ko00000,ko01000,ko01001,ko03021	COG2172 Anti-sigma regulatory factor (Ser Thr protein kinase)
PDAMAKEP_03025	1.31e-243	rsbU	3.1.3.3	-	KT	ko:K07315	-	ko00000,ko01000,ko03021	phosphatase
PDAMAKEP_03026	1.9e-68	rsbV	-	-	T	ko:K04749	-	ko00000,ko03021	Belongs to the anti-sigma-factor antagonist family
PDAMAKEP_03027	2.48e-111	rsbW	2.7.11.1	-	F	ko:K04757	-	ko00000,ko01000,ko01001,ko03021	Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B)
PDAMAKEP_03028	1.55e-178	sigB	-	-	K	ko:K03090	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PDAMAKEP_03029	1.08e-140	rsbX	3.1.3.3	-	KT	ko:K05518	-	ko00000,ko01000,ko03021	Sigma factor PP2C-like phosphatases
PDAMAKEP_03030	0.0	tex	-	-	K	ko:K06959	-	ko00000	COG2183 Transcriptional accessory protein
PDAMAKEP_03038	8.04e-96	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PDAMAKEP_03040	8.87e-62	-	-	-	S	ko:K21488	-	ko00000,ko02048	SMI1-KNR4 cell-wall
PDAMAKEP_03041	2.52e-71	-	-	-	L	ko:K21487	-	ko00000,ko01000,ko02048	A nuclease of the HNH/ENDO VII superfamily with conserved LHH
PDAMAKEP_03042	5.5e-179	-	-	-	L	ko:K21487	-	ko00000,ko01000,ko02048	A nuclease of the HNH/ENDO VII superfamily with conserved LHH
PDAMAKEP_03043	2.51e-45	-	-	-	S	-	-	-	Putative amidase domain
PDAMAKEP_03044	3.21e-305	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PDAMAKEP_03046	1.8e-45	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
PDAMAKEP_03047	6e-53	-	-	-	-	-	-	-	-
PDAMAKEP_03048	9.2e-243	des	1.14.19.23, 1.14.19.45	-	I	ko:K10255	ko02020,map02020	ko00000,ko00001,ko01000,ko01004	fatty acid desaturase
PDAMAKEP_03049	1.72e-40	cspL	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock
PDAMAKEP_03050	5.92e-102	ydeB	-	-	K	ko:K07736	-	ko00000,ko03000	Transcription factor
PDAMAKEP_03051	5.89e-183	gmT1	-	-	EG	-	-	-	COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PDAMAKEP_03052	7.3e-212	-	-	-	K	-	-	-	AraC-like ligand binding domain
PDAMAKEP_03053	1.21e-215	ydeD	-	-	EG	-	-	-	COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PDAMAKEP_03054	1.93e-207	ydeE	-	-	K	ko:K13653	-	ko00000,ko03000	AraC family transcriptional regulator
PDAMAKEP_03055	0.0	-	-	-	K	-	-	-	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PDAMAKEP_03056	4.7e-197	ydeG	-	-	EGP	-	-	-	Major facilitator superfamily
PDAMAKEP_03057	3.19e-132	ydeI	-	-	S	-	-	-	Bacteriocin-protection, YdeI or OmpD-Associated
PDAMAKEP_03058	2.67e-144	-	-	-	-	-	-	-	-
PDAMAKEP_03059	6.81e-41	-	-	-	S	-	-	-	SNARE associated Golgi protein
PDAMAKEP_03060	3.3e-19	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	PTS HPr component phosphorylation site
PDAMAKEP_03061	4.22e-111	-	-	-	K	-	-	-	Transcriptional regulator C-terminal region
PDAMAKEP_03062	1.9e-196	ydeK	-	-	EG	-	-	-	-transporter
PDAMAKEP_03063	0.0	ydeL	-	-	K	ko:K00375	-	ko00000,ko03000	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PDAMAKEP_03064	1.5e-96	ydeM1	-	-	I	-	-	-	N-terminal half of MaoC dehydratase
PDAMAKEP_03065	2.03e-136	-	-	-	S	ko:K07002	-	ko00000	Serine hydrolase
PDAMAKEP_03066	5.22e-75	-	-	-	K	-	-	-	HxlR-like helix-turn-helix
PDAMAKEP_03067	1.96e-195	ydeO	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2179)
PDAMAKEP_03068	1.05e-75	arsR	-	-	K	ko:K03892,ko:K22043	-	ko00000,ko03000	transcriptional
PDAMAKEP_03069	6.82e-292	arsB	-	-	P	ko:K03893	-	ko00000,ko02000	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
PDAMAKEP_03070	1.51e-95	arsC	1.20.4.1	-	T	ko:K03741	-	ko00000,ko01000	Catalyzes the reduction of arsenate As(V) to arsenite As(III)
PDAMAKEP_03071	2.02e-181	-	-	-	J	-	-	-	GNAT acetyltransferase
PDAMAKEP_03072	1.89e-201	-	-	-	EG	-	-	-	EamA-like transporter family
PDAMAKEP_03073	0.0	ydfD	-	-	K	ko:K18907	-	ko00000,ko00002,ko01504,ko03000	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PDAMAKEP_03074	9.91e-150	ydfE	-	-	S	-	-	-	Flavin reductase like domain
PDAMAKEP_03075	3.03e-158	ydfF	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
PDAMAKEP_03076	1.6e-103	-	-	-	S	-	-	-	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
PDAMAKEP_03078	2.64e-249	ydfH	2.7.13.3	-	T	ko:K11623	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PDAMAKEP_03079	1.33e-141	ydfI	-	-	K	ko:K11624	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PDAMAKEP_03080	0.0	ydfJ	-	-	S	ko:K06994,ko:K11625	ko02020,map02020	ko00000,ko00001	drug exporters of the RND superfamily
PDAMAKEP_03081	1.88e-223	-	-	-	S	-	-	-	Alpha/beta hydrolase family
PDAMAKEP_03082	2.27e-150	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
PDAMAKEP_03083	9.72e-186	-	-	-	K	-	-	-	Bacterial transcription activator, effector binding domain
PDAMAKEP_03085	3.65e-13	rapH	-	-	S	ko:K06366	ko02024,map02024	ko00000,ko00001,ko01000	Tetratricopeptide repeat
PDAMAKEP_03089	6.77e-75	-	-	-	L	-	-	-	COG3666 Transposase and inactivated derivatives
PDAMAKEP_03090	8.64e-198	ydfM	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PDAMAKEP_03091	7.48e-140	ydfN	-	-	C	ko:K15976	-	ko00000,ko01000	nitroreductase
PDAMAKEP_03092	7.49e-236	ydfO	-	-	E	ko:K15975	-	ko00000	COG0346 Lactoylglutathione lyase and related lyases
PDAMAKEP_03093	8.02e-84	ydfP	-	-	S	ko:K15977	-	ko00000	DoxX
PDAMAKEP_03094	3.78e-74	ydfQ	-	-	CO	-	-	-	Thioredoxin
PDAMAKEP_03095	2.4e-21	ydgA	-	-	S	-	-	-	Spore germination protein gerPA/gerPF
PDAMAKEP_03096	5.33e-39	-	-	-	-	-	-	-	-
PDAMAKEP_03098	1.78e-73	ydfR	-	-	S	-	-	-	Protein of unknown function (DUF421)
PDAMAKEP_03099	6.1e-37	ydfR	-	-	S	-	-	-	Protein of unknown function (DUF421)
PDAMAKEP_03100	8.96e-160	ydfS	-	-	S	-	-	-	Protein of unknown function (DUF421)
PDAMAKEP_03101	1.28e-98	cotP	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
PDAMAKEP_03102	5.54e-50	ydgA	-	-	S	-	-	-	Spore germination protein gerPA/gerPF
PDAMAKEP_03103	2.19e-56	ydgB	-	-	S	-	-	-	Spore germination protein gerPA/gerPF
PDAMAKEP_03104	8.51e-128	ydgC	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PDAMAKEP_03105	3.2e-67	-	-	-	S	-	-	-	DoxX-like family
PDAMAKEP_03106	1.97e-111	yycN	-	-	K	-	-	-	Acetyltransferase
PDAMAKEP_03107	1.45e-240	expZ	-	-	S	ko:K18231	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ABC transporter
PDAMAKEP_03108	3.1e-123	expZ	-	-	S	ko:K18231	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ABC transporter
PDAMAKEP_03109	0.0	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	COG1113 Gamma-aminobutyrate permease and related permeases
PDAMAKEP_03110	3.44e-117	-	-	-	S	-	-	-	DinB family
PDAMAKEP_03111	2.06e-104	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PDAMAKEP_03112	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	drug exporters of the RND superfamily
PDAMAKEP_03113	6.42e-147	ydgI	-	-	C	-	-	-	nitroreductase
PDAMAKEP_03114	6.36e-88	-	-	-	K	-	-	-	Winged helix DNA-binding domain
PDAMAKEP_03115	8.12e-265	tcaB	-	-	EGP	ko:K07552	-	ko00000,ko02000	-transporter
PDAMAKEP_03116	1.77e-155	ydhB	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
PDAMAKEP_03117	1.5e-157	ydhC	-	-	K	-	-	-	FCD
PDAMAKEP_03118	1.4e-301	ydhD	-	-	M	-	-	-	Glycosyl hydrolase
PDAMAKEP_03119	2.26e-288	ydhE	-	-	CG	-	-	-	COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase
PDAMAKEP_03120	9.32e-255	-	-	-	L	-	-	-	COG3666 Transposase and inactivated derivatives
PDAMAKEP_03122	5e-162	-	-	-	-	-	-	-	-
PDAMAKEP_03123	0.0	phoB	3.1.3.1	-	P	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	Belongs to the alkaline phosphatase family
PDAMAKEP_03124	7.57e-86	frataxin	-	-	S	ko:K05937	-	ko00000	Domain of unknown function (DU1801)
PDAMAKEP_03126	1.61e-109	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PDAMAKEP_03127	5.45e-233	ydhJ	-	-	S	ko:K06885	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
PDAMAKEP_03128	7.76e-128	ydhK	-	-	M	-	-	-	Protein of unknown function (DUF1541)
PDAMAKEP_03129	6.3e-255	ydhL	-	-	EGP	ko:K18567	-	ko00000,ko02000	COG2814 Arabinose efflux permease
PDAMAKEP_03130	2.29e-64	ydhM	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PDAMAKEP_03131	1.44e-68	ydhN3	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PDAMAKEP_03132	2.27e-305	celB	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDAMAKEP_03133	0.0	ydhP	3.2.1.21, 3.2.1.86	GT1	G	ko:K01223,ko:K05350	ko00010,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PDAMAKEP_03134	7.75e-171	ydhQ	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA
PDAMAKEP_03135	5.53e-211	gmuE	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	COG1940 Transcriptional regulator sugar kinase
PDAMAKEP_03136	8.45e-239	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
PDAMAKEP_03137	1.66e-271	ydhT1	3.2.1.78	GH26	G	ko:K01218	ko00051,ko02024,map00051,map02024	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 26 family
PDAMAKEP_03138	4.79e-100	ydhU	-	-	P	ko:K07217	-	ko00000	Catalase
PDAMAKEP_03139	7.94e-22	ydhU	-	-	P	ko:K07217	-	ko00000	Manganese containing catalase
PDAMAKEP_03142	1.13e-53	-	-	-	S	-	-	-	COG NOG14552 non supervised orthologous group
PDAMAKEP_03145	1.9e-231	thiL	2.7.4.16	-	H	ko:K00946	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
PDAMAKEP_03146	1.82e-112	ydiB	-	-	S	ko:K06925	-	ko00000,ko03016	ATPase or kinase
PDAMAKEP_03147	4.84e-161	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	COG1214 Inactive homolog of metal-dependent proteases
PDAMAKEP_03148	6.97e-109	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	This enzyme acetylates the N-terminal alanine of ribosomal protein S18
PDAMAKEP_03149	1.34e-240	tsaD	2.3.1.234	-	O	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PDAMAKEP_03150	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter
PDAMAKEP_03151	8.47e-117	moaC	4.6.1.17	-	H	ko:K03637	ko00790,ko01100,ko04122,map00790,map01100,map04122	ko00000,ko00001,ko01000	Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)
PDAMAKEP_03152	2.14e-148	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PDAMAKEP_03153	5.48e-31	tatA	-	-	U	ko:K03116	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
PDAMAKEP_03154	3.55e-161	tatC	-	-	U	ko:K03118	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PDAMAKEP_03155	3.2e-37	ydiK	-	-	S	-	-	-	Domain of unknown function (DUF4305)
PDAMAKEP_03156	3e-167	ydiL	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PDAMAKEP_03157	2.14e-58	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PDAMAKEP_03158	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PDAMAKEP_03160	1.93e-53	-	-	-	-	-	-	-	-
PDAMAKEP_03161	7.05e-293	-	-	-	S	-	-	-	Bacterial EndoU nuclease
PDAMAKEP_03164	2.61e-83	yozB	-	-	S	ko:K08976	-	ko00000	Membrane
PDAMAKEP_03165	9.59e-105	-	-	-	V	-	-	-	Type I restriction modification DNA specificity domain
PDAMAKEP_03166	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	Type I restriction-modification system
PDAMAKEP_03167	1.23e-130	hsdS	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
PDAMAKEP_03168	0.0	hsdR	3.1.21.3	-	L	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
PDAMAKEP_03169	3.21e-305	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PDAMAKEP_03170	0.0	gutR	-	-	K	ko:K16247	-	ko00000,ko03000	NB-ARC domain
PDAMAKEP_03171	8.01e-254	gutB	1.1.1.14	-	E	ko:K00008	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko00002,ko01000	Dehydrogenase
PDAMAKEP_03172	2.49e-127	gutP	-	-	G	ko:K03292,ko:K16248	-	ko00000,ko02000	MFS/sugar transport protein
PDAMAKEP_03173	2.1e-69	gutP	-	-	G	ko:K03292,ko:K16248	-	ko00000,ko02000	MFS/sugar transport protein
PDAMAKEP_03174	6.26e-62	gutP	-	-	G	ko:K03292,ko:K16248	-	ko00000,ko02000	MFS/sugar transport protein
PDAMAKEP_03175	2.99e-221	ydjE	2.7.1.4	-	G	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	pfkB family carbohydrate kinase
PDAMAKEP_03176	4.39e-145	pspA	-	-	KT	ko:K03969	-	ko00000	Phage shock protein A
PDAMAKEP_03177	3.64e-228	ydjG	-	-	L	-	-	-	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PDAMAKEP_03178	3.21e-167	ydjH	-	-	S	ko:K06872	-	ko00000	COG1512 Beta-propeller domains of methanol dehydrogenase type
PDAMAKEP_03179	3.61e-203	ydjI	-	-	S	-	-	-	virion core protein (lumpy skin disease virus)
PDAMAKEP_03180	4.11e-183	-	-	-	S	-	-	-	Ion transport 2 domain protein
PDAMAKEP_03181	1.91e-33	-	-	-	S	-	-	-	Ion transport 2 domain protein
PDAMAKEP_03182	0.0	iolT	-	-	U	ko:K02100,ko:K06609,ko:K08139	ko04113,map04113	ko00000,ko00001,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PDAMAKEP_03183	3.5e-249	ydjL	1.1.1.264, 1.1.1.303, 1.1.1.4	-	E	ko:K00004,ko:K00098	ko00650,map00650	ko00000,ko00001,ko01000	Dehydrogenase
PDAMAKEP_03184	1.79e-84	ydjM	-	-	M	-	-	-	Lytic transglycolase
PDAMAKEP_03185	1.09e-205	ydjN	-	-	U	-	-	-	Involved in the tonB-independent uptake of proteins
PDAMAKEP_03186	2.88e-186	-	-	-	L	ko:K07497	-	ko00000	Molecular Function DNA binding, Biological Process DNA recombination
PDAMAKEP_03187	3.26e-72	-	-	-	L	-	-	-	transposase activity
PDAMAKEP_03189	8.2e-48	ydjO	-	-	S	-	-	-	Cold-inducible protein YdjO
PDAMAKEP_03190	4.9e-200	-	-	-	I	-	-	-	Alpha/beta hydrolase family
PDAMAKEP_03191	1.88e-226	yeaA	-	-	S	-	-	-	Protein of unknown function (DUF4003)
PDAMAKEP_03192	0.0	cotA	1.16.3.3	-	Q	ko:K06324	-	ko00000,ko01000	multicopper oxidases
PDAMAKEP_03193	0.0	gabP	-	-	E	ko:K11735	-	ko00000,ko02000	COG1113 Gamma-aminobutyrate permease and related permeases
PDAMAKEP_03194	4.82e-196	yeaB	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PDAMAKEP_03195	2.79e-226	yeaC	-	-	S	ko:K03924	-	ko00000,ko01000	COG0714 MoxR-like ATPases
PDAMAKEP_03196	1.07e-283	yeaD	-	-	S	-	-	-	conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
PDAMAKEP_03197	0.0	yebA	-	-	E	-	-	-	COG1305 Transglutaminase-like enzymes
PDAMAKEP_03198	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
PDAMAKEP_03199	7.14e-117	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PDAMAKEP_03200	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4179)
PDAMAKEP_03201	1.2e-283	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
PDAMAKEP_03202	5.85e-165	yebC	-	-	M	-	-	-	Membrane
PDAMAKEP_03204	2.66e-120	yebE	-	-	S	-	-	-	UPF0316 protein
PDAMAKEP_03205	3.13e-38	yebG	-	-	S	-	-	-	NETI protein
PDAMAKEP_03206	2.28e-108	purE	5.4.99.18	-	F	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PDAMAKEP_03207	6.34e-276	purK	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PDAMAKEP_03208	6.85e-315	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PDAMAKEP_03209	2.78e-166	purC	6.3.2.6	-	F	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the SAICAR synthetase family
PDAMAKEP_03210	3.79e-52	purS	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PDAMAKEP_03211	1.15e-167	purQ	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PDAMAKEP_03212	0.0	purL	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PDAMAKEP_03213	0.0	purF	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PDAMAKEP_03214	1.15e-238	purM	6.3.3.1	-	F	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoribosylformylglycinamidine cyclo-ligase
PDAMAKEP_03215	8.88e-138	purN	2.1.2.2	-	F	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PDAMAKEP_03216	0.0	purH	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	Bifunctional purine biosynthesis protein PurH
PDAMAKEP_03217	5.69e-298	purD	6.3.4.13	-	F	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the GARS family
PDAMAKEP_03218	1.11e-95	-	-	-	K	-	-	-	helix_turn_helix ASNC type
PDAMAKEP_03219	9.26e-289	-	-	-	E	ko:K16263	-	ko00000,ko02000	Amino acid permease
PDAMAKEP_03220	3.45e-37	-	-	-	S	-	-	-	Protein of unknown function (DUF2892)
PDAMAKEP_03221	0.0	yerA	3.5.4.2	-	F	ko:K01486	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	adenine deaminase
PDAMAKEP_03222	1.07e-240	yerB	-	-	S	-	-	-	Protein of unknown function (DUF3048) C-terminal domain
PDAMAKEP_03223	7.62e-68	yerC	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_03224	1.66e-248	yerD	1.4.7.1	-	E	ko:K00284	ko00630,ko00910,ko01120,map00630,map00910,map01120	ko00000,ko00001,ko01000	Belongs to the glutamate synthase family
PDAMAKEP_03225	1.66e-93	yerD	1.4.7.1	-	E	ko:K00284	ko00630,ko00910,ko01120,map00630,map00910,map01120	ko00000,ko00001,ko01000	Belongs to the glutamate synthase family
PDAMAKEP_03226	4.48e-161	pcrB	-	-	I	ko:K07094	-	ko00000,ko01000	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
PDAMAKEP_03227	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
PDAMAKEP_03228	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PDAMAKEP_03229	1.77e-281	camS	-	-	S	-	-	-	COG4851 Protein involved in sex pheromone biosynthesis
PDAMAKEP_03230	5.16e-252	yerI	-	-	S	-	-	-	homoserine kinase type II (protein kinase fold)
PDAMAKEP_03231	2.29e-160	sapB	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC SapB transporter
PDAMAKEP_03232	0.0	putP	-	-	E	ko:K03307,ko:K11928	-	ko00000,ko02000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PDAMAKEP_03233	7.37e-61	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PDAMAKEP_03234	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PDAMAKEP_03235	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PDAMAKEP_03236	6.67e-187	yerO	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_03237	0.0	swrC	-	-	V	ko:K03296	-	ko00000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PDAMAKEP_03238	1.8e-218	dagK	2.7.1.107	-	I	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
PDAMAKEP_03239	0.0	rlmCD	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PDAMAKEP_03241	7.38e-123	rapA	-	-	S	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	ko00000,ko00001,ko01000	Response regulator aspartate phosphatase
PDAMAKEP_03244	1.73e-108	-	-	-	S	-	-	-	Protein of unknown function, DUF600
PDAMAKEP_03245	0.0	-	-	-	L	-	-	-	nucleic acid phosphodiester bond hydrolysis
PDAMAKEP_03246	2.38e-121	-	3.4.24.40	-	CO	ko:K01406	ko01503,map01503	ko00000,ko00001,ko01000,ko01002	amine dehydrogenase activity
PDAMAKEP_03247	1.06e-73	-	3.4.24.40	-	CO	ko:K01406	ko01503,map01503	ko00000,ko00001,ko01000,ko01002	amine dehydrogenase activity
PDAMAKEP_03248	1.73e-271	rapH	-	-	S	ko:K06366	ko02024,map02024	ko00000,ko00001,ko01000	Tetratricopeptide repeat
PDAMAKEP_03250	6.29e-162	yeeN	-	-	K	-	-	-	transcriptional regulatory protein
PDAMAKEP_03252	9.52e-128	dhaR3	-	-	K	ko:K16137	-	ko00000,ko03000	Transcriptional regulator
PDAMAKEP_03253	1.99e-37	yesE	-	-	S	ko:K06893	-	ko00000	SnoaL-like domain
PDAMAKEP_03254	7.31e-41	yesF	-	-	GM	-	-	-	NAD(P)H-binding
PDAMAKEP_03255	7.67e-60	cotJA	-	-	S	ko:K06332	-	ko00000	Spore coat associated protein JA (CotJA)
PDAMAKEP_03256	2.31e-61	cotJB	-	-	S	ko:K06333	-	ko00000	CotJB protein
PDAMAKEP_03257	1.04e-133	cotJC	-	-	P	ko:K06334	-	ko00000	Spore Coat
PDAMAKEP_03258	9.78e-130	yesJ	-	-	K	-	-	-	Acetyltransferase (GNAT) family
PDAMAKEP_03260	7.03e-130	yesL	-	-	S	-	-	-	Protein of unknown function, DUF624
PDAMAKEP_03261	0.0	yesM	2.7.13.3	-	T	ko:K07718	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PDAMAKEP_03262	1.82e-255	-	-	-	K	ko:K07720	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	helix_turn_helix, arabinose operon control protein
PDAMAKEP_03263	3.39e-313	yesO	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
PDAMAKEP_03264	1.17e-217	yesP	-	-	G	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PDAMAKEP_03265	2.08e-209	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PDAMAKEP_03266	1.81e-250	-	3.2.1.172	GH105	S	ko:K15532	-	ko00000,ko01000	Glycosyl Hydrolase Family 88
PDAMAKEP_03267	0.0	yesS	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_03268	8.05e-168	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
PDAMAKEP_03269	4.18e-162	yesU	-	-	S	-	-	-	Domain of unknown function (DUF1961)
PDAMAKEP_03270	2.32e-144	-	-	-	S	-	-	-	Protein of unknown function, DUF624
PDAMAKEP_03271	0.0	-	4.2.2.23, 4.2.2.24	PL11	E	ko:K18197,ko:K18198	-	ko00000,ko01000	cell wall organization
PDAMAKEP_03272	0.0	yesX	4.2.2.23, 4.2.2.24	PL11	E	ko:K18197,ko:K18198	-	ko00000,ko01000	cell wall organization
PDAMAKEP_03273	6.17e-158	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
PDAMAKEP_03274	1.78e-270	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase activity
PDAMAKEP_03275	7.92e-191	-	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase activity
PDAMAKEP_03276	0.0	yetA	-	-	-	-	-	-	-
PDAMAKEP_03277	0.0	lplA	-	-	G	ko:K17318	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PDAMAKEP_03278	2.39e-226	lplB	-	-	G	ko:K17319	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG4209 ABC-type polysaccharide transport system, permease component
PDAMAKEP_03279	1.3e-207	-	-	-	G	ko:K17320	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PDAMAKEP_03280	0.0	-	3.2.1.22	-	G	ko:K07406	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	Family 4 glycosyl hydrolase
PDAMAKEP_03281	7.07e-155	yetF	-	-	S	-	-	-	membrane
PDAMAKEP_03282	4.67e-73	yetG	1.14.99.48	-	S	ko:K07145	ko00860,ko01110,map00860,map01110	ko00000,ko00001,ko01000	Antibiotic biosynthesis monooxygenase
PDAMAKEP_03283	3.51e-85	yetH	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PDAMAKEP_03284	2.61e-49	-	-	-	-	-	-	-	-
PDAMAKEP_03285	1.11e-113	-	-	-	T	ko:K17763	-	ko00000,ko03021	COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PDAMAKEP_03286	1.97e-54	-	-	-	T	ko:K17763	-	ko00000,ko03021	COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PDAMAKEP_03287	3.81e-28	yezD	-	-	S	-	-	-	Uncharacterized small protein (DUF2292)
PDAMAKEP_03288	5.15e-135	yetJ	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
PDAMAKEP_03289	5.07e-38	yetM	-	-	CH	-	-	-	FAD binding domain
PDAMAKEP_03290	3.23e-171	-	-	-	M	-	-	-	Membrane
PDAMAKEP_03291	3.21e-305	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PDAMAKEP_03292	2.38e-250	yetN	-	-	S	-	-	-	Protein of unknown function (DUF3900)
PDAMAKEP_03293	0.0	cypD	1.14.14.1, 1.6.2.4	-	C	ko:K14338	ko00071,ko00380,ko00627,ko01120,map00071,map00380,map00627,map01120	ko00000,ko00001,ko00199,ko01000	Belongs to the cytochrome P450 family
PDAMAKEP_03294	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Belongs to the LTA synthase family
PDAMAKEP_03295	5.07e-189	yfnH	2.7.7.33	-	JM	ko:K00978	ko00500,ko00520,ko01100,map00500,map00520,map01100	ko00000,ko00001,ko01000	Nucleotidyl transferase
PDAMAKEP_03296	8.92e-62	yfnG	4.2.1.45, 4.2.1.46	-	M	ko:K01709,ko:K01710	ko00520,ko00521,ko00523,ko00525,ko01055,ko01130,map00520,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	dehydratase
PDAMAKEP_03297	4.76e-164	yfnG	4.2.1.45, 4.2.1.46	-	M	ko:K01709,ko:K01710	ko00520,ko00521,ko00523,ko00525,ko01055,ko01130,map00520,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	dehydratase
PDAMAKEP_03298	1.1e-228	yfnF	-	-	M	-	-	-	Nucleotide-diphospho-sugar transferase
PDAMAKEP_03299	6.42e-282	yfnE	-	-	S	-	-	-	Glycosyltransferase like family 2
PDAMAKEP_03300	3.19e-241	yfnD	-	-	M	-	-	-	Nucleotide-diphospho-sugar transferase
PDAMAKEP_03301	2.94e-266	fsr	-	-	P	ko:K08223	-	ko00000,ko02000	COG0477 Permeases of the major facilitator superfamily
PDAMAKEP_03302	3.69e-168	yfnB	3.8.1.2	-	S	ko:K01560,ko:K07025	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
PDAMAKEP_03303	6.88e-312	yfnA	-	-	E	ko:K03294	-	ko00000	amino acid
PDAMAKEP_03304	0.0	yfmT	1.2.1.3, 1.2.1.67	-	C	ko:K00128,ko:K21802	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00627,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00627,map00903,map00981,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PDAMAKEP_03305	2.09e-160	yfmS	-	-	NT	-	-	-	chemotaxis protein
PDAMAKEP_03306	0.0	yfmR	-	-	S	ko:K15738	-	ko00000,ko02000	COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PDAMAKEP_03307	3.09e-97	yfmQ	-	-	S	-	-	-	Uncharacterised protein from bacillus cereus group
PDAMAKEP_03308	3.54e-90	yfmP	-	-	K	ko:K21902	-	ko00000,ko03000	transcriptional
PDAMAKEP_03309	1.03e-264	yfmO	-	-	EGP	ko:K08221	-	ko00000,ko02000	Major facilitator superfamily
PDAMAKEP_03310	0.0	yheS_1	-	-	S	-	-	-	COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PDAMAKEP_03311	2.42e-262	yfmL	-	-	L	-	-	-	COG0513 Superfamily II DNA and RNA helicases
PDAMAKEP_03312	1.8e-95	yfmK	2.3.1.128	-	K	ko:K03790	-	ko00000,ko01000,ko03009	acetyltransferase
PDAMAKEP_03313	3.21e-305	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PDAMAKEP_03314	2e-240	yfmJ	-	-	S	ko:K07119	-	ko00000	N-terminal domain of oxidoreductase
PDAMAKEP_03315	1.4e-192	fhuC	3.6.3.34	-	P	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
PDAMAKEP_03316	2.98e-223	fecD	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PDAMAKEP_03317	4.72e-220	-	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PDAMAKEP_03318	1.53e-216	yfmC	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG4594 ABC-type Fe3 -citrate transport system, periplasmic component
PDAMAKEP_03319	1.06e-31	-	-	-	S	-	-	-	Protein of unknown function (DUF3212)
PDAMAKEP_03320	1.71e-76	yflT	-	-	S	-	-	-	Heat induced stress protein YflT
PDAMAKEP_03321	2.01e-306	pel	4.2.2.2	-	G	ko:K01728	ko00040,ko02024,map00040,map02024	ko00000,ko00001,ko01000	Pectate lyase
PDAMAKEP_03322	0.0	yflS	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
PDAMAKEP_03323	0.0	citS	2.7.13.3	-	T	ko:K11614,ko:K11637,ko:K11691	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Signal transduction histidine kinase regulating citrate malate metabolism
PDAMAKEP_03324	1.33e-152	citT	-	-	T	ko:K11638	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
PDAMAKEP_03325	6.6e-229	yflP	-	-	S	-	-	-	Tripartite tricarboxylate transporter family receptor
PDAMAKEP_03326	5.35e-288	citM	-	-	C	ko:K03300,ko:K11639	ko02020,map02020	ko00000,ko00001	Citrate transporter
PDAMAKEP_03327	2.82e-191	yflN	-	-	S	-	-	-	COG0491 Zn-dependent hydrolases, including glyoxylases
PDAMAKEP_03328	6.53e-274	nos	1.14.14.47	-	C	ko:K00491	ko00220,ko00330,ko01100,ko01110,map00220,map00330,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
PDAMAKEP_03329	3.48e-58	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
PDAMAKEP_03330	6.9e-157	yflK	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_03331	3.16e-25	yflJ	-	-	S	-	-	-	Protein of unknown function (DUF2639)
PDAMAKEP_03332	6.9e-27	yflI	-	-	-	-	-	-	-
PDAMAKEP_03333	2.1e-65	yflH	-	-	S	-	-	-	Protein of unknown function (DUF3243)
PDAMAKEP_03334	7.72e-177	yflG	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine aminopeptidase
PDAMAKEP_03335	0.0	nagE	2.7.1.193, 2.7.1.199	-	G	ko:K02802,ko:K02803,ko:K02804,ko:K20116,ko:K20117,ko:K20118	ko00010,ko00520,ko02060,map00010,map00520,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG1263 Phosphotransferase system IIC components, glucose maltose N-acetylglucosamine-specific
PDAMAKEP_03336	0.0	yflE	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Belongs to the LTA synthase family
PDAMAKEP_03337	1.89e-87	ydhN1	-	-	S	-	-	-	Domain of unknown function (DUF1992)
PDAMAKEP_03338	1.95e-142	yfkQ	-	-	EG	ko:K06295,ko:K06307	-	ko00000	Spore germination protein
PDAMAKEP_03339	0.0	treP	2.7.1.201	-	G	ko:K02818,ko:K02819	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PDAMAKEP_03340	0.0	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	COG0366 Glycosidases
PDAMAKEP_03341	1.24e-172	treR	-	-	K	ko:K03486	-	ko00000,ko03000	transcriptional
PDAMAKEP_03342	2.93e-158	frp	-	-	C	-	-	-	nitroreductase
PDAMAKEP_03343	0.0	yfkN	3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45	-	F	ko:K01081,ko:K01119,ko:K06931,ko:K08693,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PDAMAKEP_03344	6.14e-111	yfkM	3.5.1.124	-	S	ko:K05520	-	ko00000,ko01000,ko01002	protease
PDAMAKEP_03345	1.03e-264	ydiN3	-	-	EGP	-	-	-	COG0477 Permeases of the major facilitator superfamily
PDAMAKEP_03346	5.99e-41	yfkK	-	-	S	-	-	-	Belongs to the UPF0435 family
PDAMAKEP_03347	9.78e-107	yfkJ	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PDAMAKEP_03348	1.03e-66	yfkI	-	-	S	-	-	-	gas vesicle protein
PDAMAKEP_03349	1.13e-182	yihY	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
PDAMAKEP_03351	1.9e-278	yfkF	-	-	EGP	-	-	-	COG0477 Permeases of the major facilitator superfamily
PDAMAKEP_03352	1.34e-235	cax	-	-	P	ko:K07300	-	ko00000,ko02000	COG0387 Ca2 H antiporter
PDAMAKEP_03353	1.06e-188	yfkD	-	-	S	-	-	-	YfkD-like protein
PDAMAKEP_03354	1.49e-189	yfkC	-	-	M	-	-	-	Mechanosensitive ion channel
PDAMAKEP_03355	5.05e-283	yfkA	-	-	S	-	-	-	YfkB-like domain
PDAMAKEP_03356	3.26e-36	yfjT	-	-	-	-	-	-	-
PDAMAKEP_03357	5.95e-197	pdaA	-	-	G	ko:K01567	-	ko00000,ko01000	deacetylase
PDAMAKEP_03358	3.25e-192	yfjR	-	-	I	-	-	-	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
PDAMAKEP_03359	2.24e-236	corA	-	-	P	ko:K03284	-	ko00000,ko02000	Mediates influx of magnesium ions
PDAMAKEP_03360	2.76e-214	yfjP	3.2.2.21	-	L	ko:K01247	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
PDAMAKEP_03361	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PDAMAKEP_03362	4.32e-59	-	-	-	S	-	-	-	YfzA-like protein
PDAMAKEP_03363	5.07e-236	yfjN	-	-	J	-	-	-	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PDAMAKEP_03364	7.85e-110	yfjM	-	-	S	-	-	-	Psort location Cytoplasmic, score
PDAMAKEP_03366	1.36e-244	acoA	-	-	C	ko:K21416	-	ko00000,ko01000	COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
PDAMAKEP_03367	9.2e-243	acoB	-	-	C	ko:K21417	-	ko00000,ko01000	COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
PDAMAKEP_03368	5.21e-259	acoC	2.3.1.12	-	C	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PDAMAKEP_03369	0.0	acoL	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
PDAMAKEP_03370	0.0	acoR	-	-	KQ	ko:K21405	-	ko00000,ko03000	COG3284 Transcriptional activator of acetoin glycerol metabolism
PDAMAKEP_03371	8.16e-36	sspH	-	-	S	ko:K06425	-	ko00000	Belongs to the SspH family
PDAMAKEP_03372	1.5e-74	yfjF	-	-	S	ko:K09771	-	ko00000,ko02000	UPF0060 membrane protein
PDAMAKEP_03373	6.08e-131	yfjD	-	-	S	-	-	-	Family of unknown function (DUF5381)
PDAMAKEP_03374	2.5e-185	yfjC	-	-	-	-	-	-	-
PDAMAKEP_03375	1.4e-265	yfjB	-	-	-	-	-	-	-
PDAMAKEP_03376	9.28e-60	yfjA	-	-	S	-	-	-	Belongs to the WXG100 family
PDAMAKEP_03377	0.0	malH	3.2.1.122	GH4	G	ko:K01232	ko00500,map00500	ko00000,ko00001,ko01000	COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
PDAMAKEP_03378	3.54e-180	-	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
PDAMAKEP_03379	0.0	glvC	2.7.1.208	-	G	ko:K02749,ko:K02750	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PDAMAKEP_03380	0.0	yfiB3	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
PDAMAKEP_03381	0.0	yfiC3	-	-	V	ko:K06147	-	ko00000,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
PDAMAKEP_03382	3.34e-83	yfiD3	-	-	S	-	-	-	DoxX
PDAMAKEP_03383	2.97e-208	yfiE	1.13.11.2	-	S	ko:K07104	ko00361,ko00362,ko00622,ko00643,ko01100,ko01120,ko01220,map00361,map00362,map00622,map00643,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	glyoxalase
PDAMAKEP_03384	5.61e-223	-	-	-	K	ko:K02099	-	ko00000,ko03000	AraC-like ligand binding domain
PDAMAKEP_03385	0.0	yfiG	-	-	U	ko:K02100,ko:K06609,ko:K08139	ko04113,map04113	ko00000,ko00001,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PDAMAKEP_03386	2.23e-233	-	-	-	G	-	-	-	Xylose isomerase
PDAMAKEP_03387	2.75e-290	-	-	-	S	-	-	-	Oxidoreductase
PDAMAKEP_03389	2.94e-273	baeS	-	-	T	-	-	-	Histidine kinase
PDAMAKEP_03390	6.07e-146	yfiK	-	-	KT	ko:K02479	-	ko00000,ko02022	LuxR family transcriptional regulator
PDAMAKEP_03391	6.48e-216	drrA	-	-	V	ko:K01990,ko:K09695	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PDAMAKEP_03392	6.49e-268	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PDAMAKEP_03393	1.7e-262	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	COG0842 ABC-type multidrug transport system, permease component
PDAMAKEP_03394	2.13e-66	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PDAMAKEP_03395	1.89e-128	padR	-	-	K	-	-	-	transcriptional
PDAMAKEP_03396	4.55e-127	lip	3.1.1.3	-	S	ko:K01046	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko00002,ko01000	acetyltransferases and hydrolases with the alpha beta hydrolase fold
PDAMAKEP_03397	1.66e-246	yfiQ	-	-	G	ko:K21462	-	ko00000	COG3936 Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
PDAMAKEP_03398	2.31e-127	yfiT	-	-	S	-	-	-	Belongs to the metal hydrolase YfiT family
PDAMAKEP_03399	0.0	yfiU	-	-	EGP	-	-	-	the major facilitator superfamily
PDAMAKEP_03400	2.11e-103	yfiV	-	-	K	-	-	-	transcriptional
PDAMAKEP_03401	0.0	mprF	2.3.2.3	-	S	ko:K14205	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PDAMAKEP_03402	9.03e-230	yfiY	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PDAMAKEP_03403	1.04e-223	yfiZ	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PDAMAKEP_03404	3.49e-227	yfhA	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PDAMAKEP_03405	6e-212	yfhB	-	-	S	-	-	-	PhzF family
PDAMAKEP_03406	2.87e-138	yfhC	-	-	C	-	-	-	nitroreductase
PDAMAKEP_03407	8.86e-35	yfhD	-	-	S	-	-	-	YfhD-like protein
PDAMAKEP_03408	2.56e-218	yfhF	-	-	S	ko:K07071	-	ko00000	nucleoside-diphosphate sugar epimerase
PDAMAKEP_03409	2.67e-180	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Modulates RecA activity
PDAMAKEP_03410	4.58e-69	yfhH	-	-	S	-	-	-	Protein of unknown function (DUF1811)
PDAMAKEP_03412	4.05e-267	yfhI	-	-	EGP	-	-	-	-transporter
PDAMAKEP_03413	2.25e-27	sspK	-	-	S	ko:K06428	-	ko00000	reproduction
PDAMAKEP_03414	8.95e-60	yfhJ	-	-	S	-	-	-	WVELL protein
PDAMAKEP_03415	3.26e-72	-	-	-	L	-	-	-	transposase activity
PDAMAKEP_03416	2.88e-186	-	-	-	L	ko:K07497	-	ko00000	Molecular Function DNA binding, Biological Process DNA recombination
PDAMAKEP_03417	3.58e-119	yfhK	-	-	T	-	-	-	Bacterial SH3 domain homologues
PDAMAKEP_03418	1.81e-65	yfhL	-	-	S	-	-	-	SdpI/YhfL protein family
PDAMAKEP_03419	1.87e-216	yfhM	3.8.1.5	-	S	ko:K01563	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Alpha beta hydrolase
PDAMAKEP_03420	6.93e-236	csbB	-	GT2	M	ko:K20534	-	ko00000,ko01000,ko01005,ko02000	COG0463 Glycosyltransferases involved in cell wall biogenesis
PDAMAKEP_03421	0.0	yfhO	-	-	S	-	-	-	Bacterial membrane protein YfhO
PDAMAKEP_03422	2.07e-236	yfhP	-	-	S	ko:K07038	-	ko00000	membrane-bound metal-dependent
PDAMAKEP_03423	2.26e-266	mutY	-	-	L	ko:K03575	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	A G-specific
PDAMAKEP_03424	1.73e-48	yfhS	-	-	-	-	-	-	-
PDAMAKEP_03425	3.13e-172	fabL	1.3.1.104	-	IQ	ko:K10780	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PDAMAKEP_03426	9.51e-14	sspE	-	-	S	ko:K06422	-	ko00000	Small, acid-soluble spore protein, gamma-type
PDAMAKEP_03427	2.01e-49	ygaB	-	-	S	-	-	-	YgaB-like protein
PDAMAKEP_03428	1.64e-135	ygaC	-	-	J	ko:K07586	-	ko00000	Belongs to the UPF0374 family
PDAMAKEP_03429	0.0	ygaD	-	-	V	ko:K11085	ko02010,map02010	ko00000,ko00001,ko01000,ko02000	ABC transporter
PDAMAKEP_03430	3.61e-236	ygaE	-	-	S	-	-	-	Membrane
PDAMAKEP_03431	3.26e-312	gsaB	5.4.3.8	-	H	ko:K01845	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Glutamate-1-semialdehyde aminotransferase
PDAMAKEP_03432	2.92e-113	bcp	1.11.1.15	-	O	ko:K03564	-	ko00000,ko01000	Peroxiredoxin
PDAMAKEP_03433	2.37e-104	perR	-	-	P	ko:K09825	-	ko00000,ko03000	Belongs to the Fur family
PDAMAKEP_03434	5.46e-74	ygzB	-	-	S	-	-	-	UPF0295 protein
PDAMAKEP_03435	8.23e-215	ygxA	-	-	S	-	-	-	Nucleotidyltransferase-like
PDAMAKEP_03436	1.13e-53	-	-	-	S	-	-	-	COG NOG14552 non supervised orthologous group
PDAMAKEP_03453	2.88e-186	-	-	-	L	ko:K07497	-	ko00000	Molecular Function DNA binding, Biological Process DNA recombination
PDAMAKEP_03454	3.26e-72	-	-	-	L	-	-	-	transposase activity
PDAMAKEP_03455	1.5e-183	spo0M	-	-	S	ko:K06377	-	ko00000	COG4326 Sporulation control protein
PDAMAKEP_03456	1.58e-36	-	-	-	-	-	-	-	-
PDAMAKEP_03457	5.27e-168	ygaJ	3.4.13.21	-	E	ko:K05995	-	ko00000,ko01000,ko01002	Belongs to the peptidase S51 family
PDAMAKEP_03458	0.0	thiC	4.1.99.17	-	H	ko:K03147	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PDAMAKEP_03459	1.83e-18	thiC	4.1.99.17	-	H	ko:K03147	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PDAMAKEP_03460	0.0	ygaK	-	-	C	-	-	-	Berberine and berberine like
PDAMAKEP_03462	0.0	katA	1.11.1.6	-	P	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	ko00000,ko00001,ko00002,ko01000	serves to protect cells from the toxic effects of hydrogen peroxide
PDAMAKEP_03463	2.58e-178	ssuB	-	-	P	ko:K15555	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component
PDAMAKEP_03464	8.45e-218	ssuA	-	-	M	ko:K15553	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	Sulfonate ABC transporter
PDAMAKEP_03465	5.86e-190	ssuC	-	-	P	ko:K15554	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component
PDAMAKEP_03466	3.13e-274	ssuD	1.14.14.28, 1.14.14.5	-	C	ko:K04091,ko:K20938	ko00920,map00920	ko00000,ko00001,ko01000	Catalyzes the desulfonation of aliphatic sulfonates
PDAMAKEP_03468	1.96e-54	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PDAMAKEP_03469	3.81e-100	ygaO	-	-	-	-	-	-	-
PDAMAKEP_03470	1.48e-39	-	-	-	K	ko:K07729	-	ko00000,ko03000	Transcriptional regulator
PDAMAKEP_03472	1.58e-146	yhzB	-	-	S	-	-	-	B3/4 domain
PDAMAKEP_03473	4.88e-283	queG	1.17.99.6	-	C	ko:K18979	-	ko00000,ko01000,ko03016	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PDAMAKEP_03474	4.41e-222	yhbB	-	-	S	-	-	-	Putative amidase domain
PDAMAKEP_03475	1.08e-111	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PDAMAKEP_03476	5.64e-142	yhbD	-	-	K	-	-	-	Protein of unknown function (DUF4004)
PDAMAKEP_03477	3.77e-95	yhbE	-	-	M	-	-	-	COG1664 Integral membrane protein CcmA involved in cell shape determination
PDAMAKEP_03478	7.04e-104	yhbF	-	-	M	-	-	-	COG1664 Integral membrane protein CcmA involved in cell shape determination
PDAMAKEP_03479	0.0	prkA	-	-	T	ko:K07180	-	ko00000	Ser protein kinase
PDAMAKEP_03480	1.72e-286	yhbH	-	-	S	ko:K09786	-	ko00000	Belongs to the UPF0229 family
PDAMAKEP_03481	1.29e-101	yhbI	-	-	K	ko:K15973	-	ko00000,ko03000	DNA-binding transcription factor activity
PDAMAKEP_03482	1.09e-132	yhbJ	-	-	V	-	-	-	COG1566 Multidrug resistance efflux pump
PDAMAKEP_03483	0.0	yhcA	-	-	EGP	ko:K03446	-	ko00000,ko00002,ko02000	the major facilitator superfamily
PDAMAKEP_03484	1.4e-127	yhcB	1.6.5.2	-	S	ko:K03809	ko00130,ko01110,map00130,map01110	ko00000,ko00001,ko01000	Belongs to the WrbA family
PDAMAKEP_03485	3.95e-59	yhcC	-	-	-	-	-	-	-
PDAMAKEP_03486	2.92e-69	-	-	-	-	-	-	-	-
PDAMAKEP_03487	1.67e-79	yhcF	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator
PDAMAKEP_03488	5.38e-155	yhcG	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PDAMAKEP_03489	6.47e-213	yhcH	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PDAMAKEP_03490	3.45e-212	yhcI	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
PDAMAKEP_03491	1.91e-42	cspB	-	-	K	ko:K03704	-	ko00000,ko03000	Cold-shock protein
PDAMAKEP_03492	4.31e-192	metQ_3	-	-	M	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
PDAMAKEP_03493	4.78e-249	yhcK	2.7.7.65	-	T	ko:K18967	-	ko00000,ko01000,ko02000	COG2199 FOG GGDEF domain
PDAMAKEP_03494	1.51e-300	tcyP	-	-	U	ko:K06956	-	ko00000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PDAMAKEP_03495	9.32e-255	-	-	-	L	-	-	-	COG3666 Transposase and inactivated derivatives
PDAMAKEP_03496	2.4e-72	yhcM	-	-	-	-	-	-	-
PDAMAKEP_03497	1.9e-95	yhcN	-	-	S	-	-	-	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PDAMAKEP_03498	1.18e-216	yhcP	-	-	-	-	-	-	-
PDAMAKEP_03499	9.06e-142	yhcQ	-	-	M	-	-	-	Spore coat protein
PDAMAKEP_03500	0.0	yhcR	3.1.3.5, 3.1.3.6, 3.1.4.16	-	F	ko:K01081,ko:K01119,ko:K08693	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PDAMAKEP_03501	4.89e-132	yhcS	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	COG3764 Sortase (surface protein transpeptidase)
PDAMAKEP_03502	8.26e-219	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
PDAMAKEP_03503	4.27e-89	yhcU	-	-	S	-	-	-	Family of unknown function (DUF5365)
PDAMAKEP_03504	7.16e-90	yhcV	-	-	S	-	-	-	COG0517 FOG CBS domain
PDAMAKEP_03505	1.24e-154	yhcW	-	-	S	ko:K07025	-	ko00000	hydrolase
PDAMAKEP_03506	0.0	yhcX	-	-	K	-	-	-	Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
PDAMAKEP_03507	0.0	yhxA	-	-	E	-	-	-	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PDAMAKEP_03508	4.4e-134	glpP	-	-	K	ko:K02443	-	ko00000,ko03000	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
PDAMAKEP_03509	1.1e-193	glpF	-	-	G	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
PDAMAKEP_03510	0.0	glpK	2.7.1.30	-	C	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PDAMAKEP_03511	0.0	glpD	1.1.3.21, 1.1.5.3	-	C	ko:K00105,ko:K00111	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
PDAMAKEP_03512	0.0	pgcA	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase
PDAMAKEP_03513	1.54e-271	yhcY	2.7.13.3	-	T	ko:K02480	-	ko00000,ko01000,ko01001,ko02022	Histidine kinase
PDAMAKEP_03514	5.67e-146	yhcZ	-	-	K	ko:K02479	-	ko00000,ko02022	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PDAMAKEP_03515	1.34e-115	yhdA	1.7.1.6	-	S	ko:K03206	-	ko00000,ko01000	NADPH-dependent FMN reductase
PDAMAKEP_03516	1.65e-51	yhdB	-	-	S	-	-	-	YhdB-like protein
PDAMAKEP_03517	1.02e-71	yhdC	-	-	S	-	-	-	Protein of unknown function (DUF3889)
PDAMAKEP_03518	4.53e-270	lytF	-	CBM50	M	ko:K19220,ko:K19223,ko:K19224	-	ko00000,ko01000,ko01002,ko01011	COG1388 FOG LysM repeat
PDAMAKEP_03519	5.58e-99	nsrR	-	-	K	ko:K13771	ko05132,map05132	ko00000,ko00001,ko03000	Transcriptional regulator
PDAMAKEP_03520	1.02e-304	ygxB	-	-	M	-	-	-	Conserved TM helix
PDAMAKEP_03521	0.0	spoVR	-	-	S	ko:K06415	-	ko00000	Stage V sporulation protein R
PDAMAKEP_03522	0.0	phoB	3.1.3.1	-	P	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	Belongs to the alkaline phosphatase family
PDAMAKEP_03523	7.21e-204	lytE	-	CBM50	M	ko:K19220,ko:K19223,ko:K19224	-	ko00000,ko01000,ko01002,ko01011	COG1388 FOG LysM repeat
PDAMAKEP_03524	1.41e-209	citR	-	-	K	ko:K19242	-	ko00000,ko03000	Transcriptional regulator
PDAMAKEP_03525	1.76e-259	citA	2.3.3.1	-	C	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Belongs to the citrate synthase family
PDAMAKEP_03526	2.25e-205	yhdF	-	-	IQ	-	-	-	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PDAMAKEP_03527	5.36e-316	yhdG	-	-	E	ko:K03294	-	ko00000	amino acid
PDAMAKEP_03528	4.29e-310	yhdH	-	-	S	ko:K03308	-	ko00000	Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
PDAMAKEP_03529	0.0	ydeL	-	-	K	ko:K00375	-	ko00000,ko03000	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PDAMAKEP_03530	2.91e-99	-	-	-	K	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PDAMAKEP_03531	4.27e-59	yhdK	-	-	S	-	-	-	Sigma-M inhibitor protein
PDAMAKEP_03532	6.13e-258	yhdL	-	-	S	-	-	-	Sigma factor regulator N-terminal
PDAMAKEP_03533	1.08e-111	sigM	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PDAMAKEP_03534	9.18e-242	yhdN	-	-	C	-	-	-	Aldo keto reductase
PDAMAKEP_03535	3.9e-143	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
PDAMAKEP_03536	2.18e-304	yhdP	-	-	S	-	-	-	COG1253 Hemolysins and related proteins containing CBS domains
PDAMAKEP_03537	4.07e-97	cueR	-	-	K	ko:K11923	-	ko00000,ko03000	transcriptional
PDAMAKEP_03538	8.45e-283	yhdR	2.6.1.1	-	E	ko:K11358	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase
PDAMAKEP_03539	0.0	yhdT	-	-	P	-	-	-	COG1253 Hemolysins and related proteins containing CBS domains
PDAMAKEP_03540	5.01e-66	crcB	-	-	D	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDAMAKEP_03541	2.78e-85	crcB	-	-	D	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDAMAKEP_03542	1.5e-171	yhdW	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
PDAMAKEP_03543	3.7e-09	yhdX	-	-	S	-	-	-	Uncharacterized protein YhdX
PDAMAKEP_03544	1.06e-258	yhdY	-	-	M	ko:K16052	-	ko00000,ko02000	Mechanosensitive ion channel
PDAMAKEP_03545	1.19e-179	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form
PDAMAKEP_03546	2.14e-195	nodB1	-	-	G	-	-	-	deacetylase
PDAMAKEP_03547	3.16e-197	dat	2.6.1.21	-	E	ko:K00824	ko00310,ko00330,ko00360,ko00472,ko00473,ko01100,map00310,map00330,map00360,map00472,map00473,map01100	ko00000,ko00001,ko01000,ko01007	Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha- keto acid in the first half-reaction
PDAMAKEP_03548	3.77e-305	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter
PDAMAKEP_03549	1.86e-109	nhaX	-	-	T	-	-	-	Belongs to the universal stress protein A family
PDAMAKEP_03550	0.0	yheI	-	-	V	ko:K18216,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko01504,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
PDAMAKEP_03551	0.0	yheH	-	-	V	ko:K06147,ko:K18217,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko01504,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
PDAMAKEP_03552	1.84e-140	yheG	-	-	GM	-	-	-	NAD(P)H-binding
PDAMAKEP_03553	1.25e-38	sspB	-	-	S	ko:K06418,ko:K06419,ko:K06420	-	ko00000	spore protein
PDAMAKEP_03554	2.27e-49	yheE	-	-	S	-	-	-	Family of unknown function (DUF5342)
PDAMAKEP_03555	0.0	yheD	-	-	HJ	-	-	-	YheC/D like ATP-grasp
PDAMAKEP_03556	3.37e-276	yheC	-	-	HJ	-	-	-	YheC/D like ATP-grasp
PDAMAKEP_03557	4.16e-259	yheB	-	-	S	-	-	-	Belongs to the UPF0754 family
PDAMAKEP_03558	7.46e-72	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
PDAMAKEP_03559	3.71e-261	yhaZ	-	-	L	-	-	-	DNA alkylation repair enzyme
PDAMAKEP_03560	8.7e-198	yhaX	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
PDAMAKEP_03561	0.0	hemZ	-	-	H	-	-	-	coproporphyrinogen III oxidase
PDAMAKEP_03562	4.36e-266	yhaU	-	-	P	ko:K03455	-	ko00000	COG0475 Kef-type K transport systems, membrane components
PDAMAKEP_03563	6.51e-114	-	-	-	P	ko:K07228	-	ko00000	regulatory, ligand-binding protein related to C-terminal domains of K channels
PDAMAKEP_03565	3.62e-169	yhaR	-	-	I	-	-	-	enoyl-CoA hydratase
PDAMAKEP_03566	9.36e-36	-	-	-	S	-	-	-	YhzD-like protein
PDAMAKEP_03567	5.56e-215	yhaQ	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PDAMAKEP_03568	1.72e-270	yhaP	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	COG1668 ABC-type Na efflux pump, permease component
PDAMAKEP_03569	5.45e-298	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	DNA repair exonuclease
PDAMAKEP_03570	0.0	yhaN	-	-	L	-	-	-	AAA domain
PDAMAKEP_03571	2.13e-227	yhaM	-	-	L	ko:K03698	-	ko00000,ko01000,ko03019	Shows a 3'-5' exoribonuclease activity
PDAMAKEP_03572	1.88e-39	yhaL	-	-	S	-	-	-	Sporulation protein YhaL
PDAMAKEP_03573	3.85e-160	prsA	5.2.1.8	-	M	ko:K01802,ko:K07533	-	ko00000,ko01000,ko03110	plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PDAMAKEP_03574	1.4e-116	yhaK	-	-	S	-	-	-	Putative zincin peptidase
PDAMAKEP_03575	8.48e-73	yhaI	-	-	S	-	-	-	Protein of unknown function (DUF1878)
PDAMAKEP_03576	4.92e-148	hpr	-	-	K	ko:K09682	-	ko00000,ko03000	Negative regulator of protease production and sporulation
PDAMAKEP_03577	1.88e-54	yhaH	-	-	S	-	-	-	YtxH-like protein
PDAMAKEP_03578	1.28e-103	trpP	-	-	S	-	-	-	Tryptophan transporter TrpP
PDAMAKEP_03579	1.84e-262	serC	2.6.1.52	-	E	ko:K00831	ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PDAMAKEP_03580	1.43e-105	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
PDAMAKEP_03581	2.7e-176	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	transporter (ATP-binding protein)
PDAMAKEP_03582	4.23e-270	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
PDAMAKEP_03583	7.1e-162	ecsC	-	-	S	-	-	-	EcsC protein family
PDAMAKEP_03584	1.32e-292	yhaA	-	-	E	ko:K01436	-	ko00000,ko01000,ko01002	COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
PDAMAKEP_03585	3.29e-313	yhfA	-	-	C	-	-	-	membrane
PDAMAKEP_03586	8.58e-46	-	-	-	C	-	-	-	Rubrerythrin
PDAMAKEP_03587	1.08e-117	traP	1.14.99.57	-	S	ko:K21481	-	ko00000,ko01000	enzyme involved in biosynthesis of extracellular polysaccharides
PDAMAKEP_03588	0.0	pbpF	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
PDAMAKEP_03589	9.08e-260	hemE	4.1.1.37	-	H	ko:K01599	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
PDAMAKEP_03590	3.41e-231	hemH	4.99.1.1, 4.99.1.9	-	H	ko:K01772	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the ferrous insertion into protoporphyrin IX
PDAMAKEP_03591	0.0	hemY	1.3.3.15, 1.3.3.4	-	H	ko:K00231	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
PDAMAKEP_03592	6.76e-131	yhgD	-	-	K	ko:K09017	-	ko00000,ko03000	Transcriptional regulator
PDAMAKEP_03593	0.0	yhgE	-	-	S	ko:K01421	-	ko00000	YhgE Pip N-terminal domain protein
PDAMAKEP_03594	2.07e-235	fabHB	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PDAMAKEP_03595	1.88e-177	yhfC	-	-	S	-	-	-	Putative membrane peptidase family (DUF2324)
PDAMAKEP_03596	1.55e-252	yhfE	-	-	G	-	-	-	peptidase M42
PDAMAKEP_03597	1.53e-93	-	-	-	S	-	-	-	ASCH
PDAMAKEP_03598	4.77e-289	gltT	-	-	C	ko:K03309,ko:K11102,ko:K11103	ko02020,map02020	ko00000,ko00001,ko02000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PDAMAKEP_03599	4.01e-181	yhfI	-	-	S	-	-	-	COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III
PDAMAKEP_03600	8.2e-245	lplJ	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Lipoate-protein ligase
PDAMAKEP_03601	2.13e-143	yhfK	-	-	GM	-	-	-	NmrA-like family
PDAMAKEP_03602	0.0	yhfL	6.2.1.3	-	IQ	ko:K00666,ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	AMP-binding enzyme C-terminal domain
PDAMAKEP_03603	2.78e-85	yhfM	-	-	-	-	-	-	-
PDAMAKEP_03604	4.39e-304	yhfN	-	-	O	-	-	-	Peptidase M48
PDAMAKEP_03605	1.7e-260	aprE	3.4.21.62	-	O	ko:K01342,ko:K13277	ko02024,map02024	ko00000,ko00001,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
PDAMAKEP_03606	1.47e-100	-	-	-	K	-	-	-	acetyltransferase
PDAMAKEP_03607	2.4e-232	yhfP	1.1.1.1	-	C	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Quinone oxidoreductase
PDAMAKEP_03608	1.79e-219	yhfQ	-	-	M	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
PDAMAKEP_03609	3.93e-140	yhfR	5.4.2.12	-	G	ko:K15634,ko:K15640	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the phosphoglycerate mutase family
PDAMAKEP_03610	8.58e-250	yhfS	2.3.1.9	-	I	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
PDAMAKEP_03611	0.0	vraA	6.2.1.3	-	IQ	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	AMP-binding enzyme C-terminal domain
PDAMAKEP_03612	1.47e-118	bioY	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	BioY family
PDAMAKEP_03613	1.02e-257	hemAT	-	-	NT	ko:K06595	-	ko00000,ko02035	chemotaxis protein
PDAMAKEP_03614	4.74e-120	yhfW	-	-	CE	-	-	-	COG0665 Glycine D-amino acid oxidases (deaminating)
PDAMAKEP_03615	1.49e-232	yhfW	-	-	CE	-	-	-	COG0665 Glycine D-amino acid oxidases (deaminating)
PDAMAKEP_03616	3.72e-202	yhxC	-	-	IQ	-	-	-	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PDAMAKEP_03617	9.84e-45	yhzC	-	-	S	-	-	-	IDEAL
PDAMAKEP_03618	2.19e-141	comK	-	-	K	ko:K02250	ko02024,map02024	ko00000,ko00001,ko02044,ko03000	Competence transcription factor
PDAMAKEP_03619	1.16e-212	yhxD	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
PDAMAKEP_03620	1.68e-55	yhjA	-	-	S	-	-	-	Excalibur calcium-binding domain
PDAMAKEP_03621	0.0	yhjB	-	-	E	ko:K03307	-	ko00000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PDAMAKEP_03622	1.61e-36	yhjC	-	-	S	-	-	-	Protein of unknown function (DUF3311)
PDAMAKEP_03623	4.13e-78	yhjD	-	-	-	-	-	-	-
PDAMAKEP_03624	4.87e-141	yhjE	-	-	S	-	-	-	SNARE associated Golgi protein
PDAMAKEP_03625	3.09e-118	spsB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PDAMAKEP_03626	0.0	yhjG	-	-	CH	-	-	-	FAD binding domain
PDAMAKEP_03627	2.82e-122	yhjH	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PDAMAKEP_03628	3.64e-272	glcP	-	-	G	ko:K08174	-	ko00000,ko02000	Major Facilitator Superfamily
PDAMAKEP_03629	1.89e-255	-	1.1.1.18, 1.1.1.361, 1.1.1.369	-	S	ko:K00010,ko:K18652	ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130	ko00000,ko00001,ko01000	Oxidoreductase family, C-terminal alpha/beta domain
PDAMAKEP_03630	1.07e-204	ntdB	3.1.3.24, 3.1.3.92	-	S	ko:K07024,ko:K18654	ko00500,map00500	ko00000,ko00001,ko01000	Sucrose-6F-phosphate phosphohydrolase
PDAMAKEP_03631	6.26e-100	-	2.6.1.104	-	E	ko:K18653	-	ko00000,ko01000	Belongs to the DegT DnrJ EryC1 family
PDAMAKEP_03632	3.75e-146	-	2.6.1.104	-	E	ko:K18653	-	ko00000,ko01000	Belongs to the DegT DnrJ EryC1 family
PDAMAKEP_03633	1.77e-238	yhjM	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_03634	2.5e-259	yhjN	-	-	S	ko:K07120	-	ko00000	membrane
PDAMAKEP_03635	7.04e-270	-	-	-	EGP	-	-	-	Transmembrane secretion effector
PDAMAKEP_03636	0.0	-	-	-	S	-	-	-	Sugar transport-related sRNA regulator N-term
PDAMAKEP_03637	9.3e-102	yhjR	-	-	S	-	-	-	Rubrerythrin
PDAMAKEP_03638	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	ATP-dependent helicase deoxyribonuclease subunit B
PDAMAKEP_03639	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
PDAMAKEP_03640	6.64e-279	sbcD	-	-	L	ko:K03547	-	ko00000,ko03400	SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PDAMAKEP_03641	0.0	sbcC	-	-	L	ko:K03546	-	ko00000,ko03400	COG0419 ATPase involved in DNA repair
PDAMAKEP_03642	2.41e-62	yisB	-	-	V	-	-	-	COG1403 Restriction endonuclease
PDAMAKEP_03643	3.3e-43	gerPF	-	-	S	ko:K06299,ko:K06304	-	ko00000	Spore germination protein gerPA/gerPF
PDAMAKEP_03644	4.08e-88	gerPE	-	-	S	ko:K06303	-	ko00000	Spore germination protein GerPE
PDAMAKEP_03645	7.36e-34	gerPD	-	-	S	ko:K06302	-	ko00000	Spore germination protein
PDAMAKEP_03646	1e-93	gerPC	-	-	S	ko:K06301	-	ko00000	Spore germination protein
PDAMAKEP_03647	1.76e-47	gerPB	-	-	S	ko:K06300	-	ko00000	cell differentiation
PDAMAKEP_03648	1.82e-45	gerPA	-	-	S	ko:K06299	-	ko00000	Spore germination protein
PDAMAKEP_03649	1.52e-32	yisI	-	-	S	-	-	-	Spo0E like sporulation regulatory protein
PDAMAKEP_03650	2.2e-221	cotH	-	-	M	ko:K06330	-	ko00000	Spore Coat
PDAMAKEP_03651	2.66e-219	yisK	-	-	Q	-	-	-	COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
PDAMAKEP_03652	1.02e-74	yisL	-	-	S	-	-	-	UPF0344 protein
PDAMAKEP_03653	0.0	wprA	-	-	O	ko:K13274	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
PDAMAKEP_03654	4.29e-131	yisN	-	-	S	-	-	-	Protein of unknown function (DUF2777)
PDAMAKEP_03655	0.0	asnO	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
PDAMAKEP_03656	8.1e-151	crtM	2.5.1.32, 2.5.1.99	-	I	ko:K02291	ko00906,ko01062,ko01100,ko01110,map00906,map01062,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	phytoene
PDAMAKEP_03657	1.01e-310	yisQ	-	-	V	-	-	-	Mate efflux family protein
PDAMAKEP_03658	1.41e-207	yisR	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_03659	1.61e-229	rbsR	-	-	K	ko:K02529,ko:K03484	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PDAMAKEP_03660	7.35e-249	yisS	1.1.1.18, 1.1.1.369, 1.1.1.370	-	S	ko:K00010,ko:K16043	ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130	ko00000,ko00001,ko01000	Oxidoreductase family, C-terminal alpha/beta domain
PDAMAKEP_03661	1.41e-119	yisT	-	-	S	-	-	-	DinB family
PDAMAKEP_03662	1.28e-138	argO	-	-	S	ko:K06895	-	ko00000,ko02000	Lysine exporter protein LysE YggA
PDAMAKEP_03663	0.0	ydfD	-	-	K	ko:K18907	-	ko00000,ko00002,ko01504,ko03000	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PDAMAKEP_03664	2.15e-96	yisX	-	-	S	-	-	-	Pentapeptide repeats (9 copies)
PDAMAKEP_03665	2.16e-197	yisY	1.11.1.10	-	I	ko:K00433	-	ko00000,ko01000	hydrolases or acyltransferases (alpha beta hydrolase superfamily)
PDAMAKEP_03666	5.55e-143	cysC	2.7.1.25	-	P	ko:K00860	ko00230,ko00920,ko01100,ko01120,map00230,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of activated sulfate
PDAMAKEP_03667	1.37e-208	sat	2.7.7.4	-	P	ko:K00958	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the sulfate adenylyltransferase family
PDAMAKEP_03668	6.09e-65	sat	2.7.7.4	-	P	ko:K00958	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the sulfate adenylyltransferase family
PDAMAKEP_03669	1.35e-74	cysH	1.8.4.10, 1.8.4.8	-	EH	ko:K00390	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the PAPS reductase family. CysH subfamily
PDAMAKEP_03670	2.81e-82	cysH	1.8.4.10, 1.8.4.8	-	EH	ko:K00390	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the PAPS reductase family. CysH subfamily
PDAMAKEP_03671	5.02e-158	-	3.1.3.71	-	H	ko:K05979	ko00680,ko01120,map00680,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the ComB family
PDAMAKEP_03672	2.05e-178	yitD	4.4.1.19	-	S	ko:K08097	ko00680,ko01120,map00680,map01120	ko00000,ko00001,ko00002,ko01000	synthase
PDAMAKEP_03673	1.1e-138	yitE	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PDAMAKEP_03674	1.71e-205	yitF	5.5.1.27	-	M	ko:K18983	ko00053,map00053	ko00000,ko00001,ko01000	Belongs to the mandelate racemase muconate lactonizing enzyme family
PDAMAKEP_03675	5.32e-60	-	-	-	L	-	-	-	Transposase and inactivated derivatives, TnpA family
PDAMAKEP_03676	2.89e-25	-	-	-	L	-	-	-	Transposase and inactivated derivatives, TnpA family
PDAMAKEP_03677	2.2e-100	-	-	-	-	-	-	-	-
PDAMAKEP_03678	1.99e-122	-	-	-	EG	-	-	-	Spore germination protein
PDAMAKEP_03679	1.07e-84	-	-	-	S	-	-	-	TIGRFAM germination protein, Ger(x)C family
PDAMAKEP_03680	2.56e-34	-	-	-	S	-	-	-	Protein of unknown function (DUF2642)
PDAMAKEP_03681	9.14e-206	-	-	-	P	-	-	-	Catalase
PDAMAKEP_03682	3.72e-36	-	-	-	S	-	-	-	Protein of unknown function (DUF1657)
PDAMAKEP_03683	8.01e-102	-	-	-	S	-	-	-	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PDAMAKEP_03684	4.11e-105	spoVAC	-	-	S	ko:K06405	-	ko00000	stage V sporulation protein AC
PDAMAKEP_03685	1e-249	spoVAD	-	-	I	ko:K06406	-	ko00000	Stage V sporulation protein AD
PDAMAKEP_03686	1.77e-74	spoVAE	-	-	S	ko:K06407	-	ko00000	stage V sporulation protein
PDAMAKEP_03687	1.15e-39	-	-	-	S	-	-	-	Protein of unknown function (DUF1657)
PDAMAKEP_03688	2.79e-193	-	-	-	S	-	-	-	membrane
PDAMAKEP_03689	1.38e-16	-	-	-	S	-	-	-	Protein of unknown function (DUF421)
PDAMAKEP_03690	4.54e-91	-	-	-	S	-	-	-	Protein of unknown function (DUF421)
PDAMAKEP_03691	0.0	-	-	-	I	-	-	-	PLD-like domain
PDAMAKEP_03692	3.67e-126	-	-	-	S	-	-	-	Protein of unknown function (DUF421)
PDAMAKEP_03693	9.21e-197	yitG	-	-	EGP	ko:K08221	-	ko00000,ko02000	COG0477 Permeases of the major facilitator superfamily
PDAMAKEP_03694	9.86e-201	yitH	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PDAMAKEP_03695	2.95e-91	-	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
PDAMAKEP_03696	0.0	yitJ	1.5.1.20, 2.1.1.10	-	E	ko:K00297,ko:K00547	ko00270,ko00670,ko00720,ko01100,ko01110,ko01120,ko01200,ko01523,map00270,map00670,map00720,map01100,map01110,map01120,map01200,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine
PDAMAKEP_03697	4.29e-77	yitK	-	-	S	ko:K09767	-	ko00000	Belongs to the UPF0234 family
PDAMAKEP_03698	1.59e-203	yitL	-	-	S	ko:K00243	-	ko00000	protein conserved in bacteria
PDAMAKEP_03699	4.16e-122	-	-	-	-	-	-	-	-
PDAMAKEP_03700	2.75e-216	-	-	-	-	-	-	-	-
PDAMAKEP_03701	3.29e-127	-	-	-	S	-	-	-	Sporulation delaying protein SdpA
PDAMAKEP_03702	2.08e-77	-	-	-	K	-	-	-	Transcriptional regulator PadR-like family
PDAMAKEP_03703	7.13e-119	-	-	-	-	-	-	-	-
PDAMAKEP_03704	4.59e-59	yitR	-	-	S	-	-	-	Domain of unknown function (DUF3784)
PDAMAKEP_03705	0.0	nprB	3.4.24.28	-	E	ko:K01400,ko:K08777	ko02024,map02024	ko00000,ko00001,ko01000,ko01002	Peptidase M4
PDAMAKEP_03706	8.75e-200	yitS	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_03707	2.29e-189	yitT	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2179)
PDAMAKEP_03708	9.69e-94	ipi	-	-	S	-	-	-	Intracellular proteinase inhibitor
PDAMAKEP_03709	1.01e-25	-	-	-	S	-	-	-	Protein of unknown function (DUF3813)
PDAMAKEP_03710	1.92e-08	-	-	-	-	-	-	-	-
PDAMAKEP_03711	5.29e-199	yitU	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolases of the HAD superfamily
PDAMAKEP_03712	1.19e-183	yitV	-	-	S	ko:K06889	-	ko00000	COG1073 Hydrolases of the alpha beta superfamily
PDAMAKEP_03713	4.63e-68	yitW	-	-	S	-	-	-	metal-sulfur cluster biosynthetic enzyme
PDAMAKEP_03714	1.74e-31	-	-	-	S	-	-	-	Proteolipid membrane potential modulator
PDAMAKEP_03715	3.44e-23	yitY	-	-	C	-	-	-	D-arabinono-1,4-lactone oxidase
PDAMAKEP_03716	3e-286	yitY	-	-	C	-	-	-	D-arabinono-1,4-lactone oxidase
PDAMAKEP_03717	1.69e-17	yitZ	-	-	G	-	-	-	Major Facilitator Superfamily
PDAMAKEP_03718	2.71e-83	yitZ	-	-	G	-	-	-	Major Facilitator Superfamily
PDAMAKEP_03719	1.38e-250	argC	1.2.1.38	-	E	ko:K00145	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PDAMAKEP_03720	5.83e-292	argJ	2.3.1.1, 2.3.1.35	-	E	ko:K00620	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PDAMAKEP_03721	2.56e-175	argB	2.7.2.8	-	E	ko:K00930	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the acetylglutamate kinase family. ArgB subfamily
PDAMAKEP_03722	6.59e-276	argD	2.6.1.11, 2.6.1.17	-	E	ko:K00821	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	acetylornithine aminotransferase
PDAMAKEP_03723	8.11e-263	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
PDAMAKEP_03724	0.0	carB	6.3.5.5	-	EF	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase ammonia chain
PDAMAKEP_03725	4.27e-225	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PDAMAKEP_03726	2.51e-39	yjzC	-	-	S	-	-	-	YjzC-like protein
PDAMAKEP_03727	2.17e-23	yjzD	-	-	S	-	-	-	Protein of unknown function (DUF2929)
PDAMAKEP_03728	8.09e-181	yjaU	-	-	I	-	-	-	carboxylic ester hydrolase activity
PDAMAKEP_03729	1.43e-129	yjaV	-	-	-	-	-	-	-
PDAMAKEP_03730	4.83e-217	med	-	-	S	ko:K05519,ko:K07335	-	ko00000,ko03000	Transcriptional activator protein med
PDAMAKEP_03731	1.07e-35	comZ	-	-	S	ko:K02254	-	ko00000,ko02044	ComZ
PDAMAKEP_03732	1.95e-35	yjzB	-	-	-	-	-	-	-
PDAMAKEP_03733	1.61e-221	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PDAMAKEP_03734	3.06e-302	fabF	2.3.1.179	-	I	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PDAMAKEP_03735	5.27e-190	yjaZ	-	-	O	-	-	-	Zn-dependent protease
PDAMAKEP_03736	6.15e-234	appD	-	-	P	ko:K02031,ko:K15583,ko:K16202	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PDAMAKEP_03737	8.09e-235	appF	-	-	E	ko:K02032,ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PDAMAKEP_03738	0.0	appA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0747 ABC-type dipeptide transport system, periplasmic component
PDAMAKEP_03739	6.73e-216	appB	-	-	P	ko:K02033	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PDAMAKEP_03740	1.03e-208	appC	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PDAMAKEP_03741	4.34e-188	yjbA	-	-	S	-	-	-	Belongs to the UPF0736 family
PDAMAKEP_03742	3.26e-72	-	-	-	L	-	-	-	transposase activity
PDAMAKEP_03743	2.88e-186	-	-	-	L	ko:K07497	-	ko00000	Molecular Function DNA binding, Biological Process DNA recombination
PDAMAKEP_03744	2.92e-233	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Tryptophanyl-tRNA synthetase
PDAMAKEP_03745	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PDAMAKEP_03746	1.03e-212	oppB	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PDAMAKEP_03747	7.55e-212	oppC	-	-	EP	ko:K15582,ko:K16201	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PDAMAKEP_03748	4.57e-248	oppD	-	-	P	ko:K02031,ko:K15583,ko:K16202	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PDAMAKEP_03749	4.43e-220	oppF	-	-	E	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PDAMAKEP_03750	3.73e-257	yjbB	-	-	EGP	-	-	-	Major Facilitator Superfamily
PDAMAKEP_03751	1.79e-131	yjbC	-	-	K	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PDAMAKEP_03752	1.01e-87	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PDAMAKEP_03753	7.1e-144	yjbE	-	-	P	-	-	-	Integral membrane protein TerC family
PDAMAKEP_03754	4.65e-149	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC
PDAMAKEP_03755	2.08e-280	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
PDAMAKEP_03756	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
PDAMAKEP_03757	2.68e-28	-	-	-	-	-	-	-	-
PDAMAKEP_03758	1.54e-217	yjbH	-	-	Q	-	-	-	dithiol-disulfide isomerase involved in polyketide biosynthesis
PDAMAKEP_03759	8.58e-94	yjbI	-	-	S	ko:K06886	-	ko00000	Bacterial-like globin
PDAMAKEP_03760	2.07e-128	yjbJ	-	-	M	-	-	-	COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
PDAMAKEP_03761	7.32e-130	yjbK	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_03762	1.87e-81	yjbL	-	-	S	-	-	-	Belongs to the UPF0738 family
PDAMAKEP_03763	5.06e-145	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	GTP pyrophosphokinase
PDAMAKEP_03764	2.94e-194	nadK	2.7.1.23	-	G	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PDAMAKEP_03765	2.12e-202	rluD	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
PDAMAKEP_03766	6.65e-180	prpE	3.1.3.16, 3.6.1.41	-	T	ko:K01090,ko:K01525	ko00230,map00230	ko00000,ko00001,ko01000	Asymmetrically hydrolyzes Ap4p to yield AMP and ATP
PDAMAKEP_03767	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PDAMAKEP_03768	7.78e-175	tenA	3.5.99.2	-	K	ko:K03707	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03000	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
PDAMAKEP_03769	5.7e-139	tenI	5.3.99.10	-	H	ko:K10810	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03000	Transcriptional regulator TenI
PDAMAKEP_03770	1.09e-275	thiO	1.4.3.19, 1.4.5.1	-	E	ko:K00285,ko:K03153	ko00360,ko00730,ko01100,map00360,map00730,map01100	ko00000,ko00001,ko01000	Glycine oxidase
PDAMAKEP_03771	2.18e-41	thiS	-	-	H	ko:K03154	ko04122,map04122	ko00000,ko00001	thiamine diphosphate biosynthetic process
PDAMAKEP_03772	6.78e-174	thiG	2.8.1.10	-	H	ko:K03149	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
PDAMAKEP_03773	2.52e-237	thiF	2.7.7.73, 2.7.7.80	-	H	ko:K03148,ko:K21029	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000	COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
PDAMAKEP_03774	4.85e-191	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
PDAMAKEP_03775	1.23e-182	fabI	1.3.1.10, 1.3.1.9	-	I	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl- acyl-carrier-protein reductase NADH
PDAMAKEP_03776	2.56e-104	yjbX	-	-	S	-	-	-	Spore coat protein
PDAMAKEP_03777	4.57e-108	cotZ	-	-	S	ko:K06344	-	ko00000	Spore coat protein
PDAMAKEP_03778	3.12e-124	cotY	-	-	S	ko:K06343	-	ko00000	Spore coat protein Z
PDAMAKEP_03779	3.55e-110	cotX	-	-	S	ko:K06342	-	ko00000	Spore Coat Protein X and V domain
PDAMAKEP_03780	9.52e-51	cotW	-	-	-	ko:K06341	-	ko00000	-
PDAMAKEP_03781	1.44e-72	cotV	-	-	S	ko:K06340	-	ko00000	Spore Coat Protein X and V domain
PDAMAKEP_03782	5.03e-75	yjcA	-	-	S	-	-	-	Protein of unknown function (DUF1360)
PDAMAKEP_03785	1.88e-52	spoVIF	-	-	S	-	-	-	Stage VI sporulation protein F
PDAMAKEP_03786	0.0	yjcD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
PDAMAKEP_03787	6.31e-51	-	-	-	-	-	-	-	-
PDAMAKEP_03788	1.1e-93	yjcF	-	-	S	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PDAMAKEP_03789	1.2e-121	yjcG	-	-	J	-	-	-	Belongs to the 2H phosphoesterase superfamily. YjcG family
PDAMAKEP_03790	1.91e-177	yjcH	-	-	P	ko:K07214	-	ko00000	COG2382 Enterochelin esterase and related enzymes
PDAMAKEP_03791	1.98e-273	metB	2.5.1.48	-	E	ko:K01739	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
PDAMAKEP_03792	1.84e-280	metC	4.4.1.8	-	E	ko:K01760	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
PDAMAKEP_03793	6.86e-126	yjcK	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Alanine acetyltransferase
PDAMAKEP_03794	2.47e-272	yjcL	-	-	S	-	-	-	Protein of unknown function (DUF819)
PDAMAKEP_03796	4.41e-24	-	-	-	-	-	-	-	-
PDAMAKEP_03797	3.72e-38	-	-	-	-	-	-	-	-
PDAMAKEP_03799	2.35e-295	-	-	-	M	-	-	-	nucleic acid phosphodiester bond hydrolysis
PDAMAKEP_03801	2.78e-64	-	-	-	L	-	-	-	transposase activity
PDAMAKEP_03802	8.27e-186	-	-	-	L	ko:K07497	-	ko00000	Molecular Function DNA binding, Biological Process DNA recombination
PDAMAKEP_03804	1.42e-09	-	-	-	S	-	-	-	YolD-like protein
PDAMAKEP_03805	1.92e-47	-	-	-	-	-	-	-	-
PDAMAKEP_03806	2.77e-26	-	-	-	-	-	-	-	-
PDAMAKEP_03807	1.72e-23	-	-	-	-	-	-	-	-
PDAMAKEP_03808	1.27e-61	yjcS	-	-	S	-	-	-	Antibiotic biosynthesis monooxygenase
PDAMAKEP_03809	2.81e-180	-	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
PDAMAKEP_03810	0.000141	-	-	-	-	-	-	-	-
PDAMAKEP_03811	0.0	manR	-	-	GKT	ko:K02538,ko:K03491	-	ko00000,ko03000	transcriptional antiterminator
PDAMAKEP_03812	0.0	manP	2.7.1.202	-	G	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PDAMAKEP_03813	1.46e-239	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
PDAMAKEP_03814	4.79e-78	yjdF3	-	-	S	-	-	-	Protein of unknown function (DUF2992)
PDAMAKEP_03815	3.21e-305	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PDAMAKEP_03816	3.52e-106	-	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
PDAMAKEP_03817	1.18e-104	ebsC	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PDAMAKEP_03818	6.12e-40	-	-	-	S	-	-	-	Domain of unknown function (DUF4177)
PDAMAKEP_03819	2.31e-69	yjdJ	-	-	S	-	-	-	Domain of unknown function (DUF4306)
PDAMAKEP_03820	4.36e-223	ctaB	2.5.1.141	-	O	ko:K02257	ko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714	ko00000,ko00001,ko00002,ko01000,ko01006,ko03029	Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group
PDAMAKEP_03822	0.0	yjeA	3.5.1.104	-	G	ko:K22278	-	ko00000,ko01000	Polysaccharide deacetylase
PDAMAKEP_03823	6.11e-106	-	-	-	S	-	-	-	Protein of unknown function (DUF2690)
PDAMAKEP_03824	4.62e-29	yjfB	-	-	S	-	-	-	Putative motility protein
PDAMAKEP_03825	9.56e-212	yjfC	-	-	O	-	-	-	Predicted Zn-dependent protease (DUF2268)
PDAMAKEP_03826	1.38e-59	yjgA	-	-	T	-	-	-	Protein of unknown function (DUF2809)
PDAMAKEP_03827	4.08e-132	yjgB	-	-	S	-	-	-	Domain of unknown function (DUF4309)
PDAMAKEP_03828	0.0	yjgC	1.17.1.9	-	C	ko:K00123	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	ko00000,ko00001,ko01000	formate dehydrogenase (NAD+) activity
PDAMAKEP_03829	1.84e-85	yjgC	1.17.1.9	-	C	ko:K00123	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	ko00000,ko00001,ko01000	formate dehydrogenase (NAD+) activity
PDAMAKEP_03830	9.24e-122	yjgD	-	-	S	-	-	-	Protein of unknown function (DUF1641)
PDAMAKEP_03833	5.04e-87	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
PDAMAKEP_03835	2.16e-282	yjiB	1.14.14.46, 1.14.15.13	-	C	ko:K15468,ko:K16593,ko:K17474	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko00199,ko01000,ko01008	Cytochrome P450
PDAMAKEP_03836	4.15e-278	yjiC	-	-	CG	-	-	-	COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase
PDAMAKEP_03837	9.18e-41	-	-	-	-	-	-	-	-
PDAMAKEP_03838	1.54e-180	hemD	4.2.1.75	-	H	ko:K01719	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Uroporphyrinogen-III synthase
PDAMAKEP_03839	5.23e-155	ybbM	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	transport system, permease component
PDAMAKEP_03840	1.09e-172	yjkB	-	-	P	ko:K02068	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PDAMAKEP_03841	1.04e-223	yjlA	-	-	EG	-	-	-	Putative multidrug resistance efflux transporter
PDAMAKEP_03842	2.44e-115	yjlB	-	-	S	-	-	-	Cupin domain
PDAMAKEP_03843	1.39e-87	yjlC	-	-	S	-	-	-	Protein of unknown function (DUF1641)
PDAMAKEP_03844	8.74e-280	yjlD	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
PDAMAKEP_03845	0.0	uxaC	5.3.1.12	-	G	ko:K01812	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	glucuronate isomerase
PDAMAKEP_03846	7.52e-315	-	-	-	G	ko:K03292	-	ko00000	symporter YjmB
PDAMAKEP_03847	3.6e-242	allD	1.1.1.350	-	C	ko:K00073	ko00230,ko01120,map00230,map01120	ko00000,ko00001,ko01000	Belongs to the LDH2 MDH2 oxidoreductase family
PDAMAKEP_03848	2.65e-245	yjmD	1.1.1.380	-	E	ko:K08322	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	Alcohol dehydrogenase GroES-like domain
PDAMAKEP_03849	7.59e-271	uxuA	4.2.1.8	-	G	ko:K01686	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the dehydration of D-mannonate
PDAMAKEP_03850	4.49e-195	yjmF	-	-	IQ	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
PDAMAKEP_03851	1.86e-287	exuT	-	-	G	ko:K03535,ko:K08191	-	ko00000,ko02000	Sugar (and other) transporter
PDAMAKEP_03852	2.23e-234	exuR	-	-	K	ko:K02529	-	ko00000,ko03000	transcriptional
PDAMAKEP_03853	0.0	uxaB	1.1.1.58	-	G	ko:K00041	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	tagaturonate reductase activity
PDAMAKEP_03854	0.0	uxaA	4.2.1.42, 4.2.1.7	-	G	ko:K01685,ko:K01708	ko00040,ko00053,ko01100,map00040,map00053,map01100	ko00000,ko00001,ko00002,ko01000	Altronate
PDAMAKEP_03855	9.2e-167	yjnA	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
PDAMAKEP_03856	2.71e-103	yjoA	-	-	S	-	-	-	DinB family
PDAMAKEP_03857	6.69e-123	VCP	-	-	O	-	-	-	AAA domain (dynein-related subfamily)
PDAMAKEP_03858	2.15e-165	VCP	-	-	O	-	-	-	AAA domain (dynein-related subfamily)
PDAMAKEP_03859	8.59e-272	rapA	-	-	S	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	ko00000,ko00001,ko01000	Response regulator aspartate phosphatase
PDAMAKEP_03861	1.21e-53	-	-	-	S	-	-	-	YCII-related domain
PDAMAKEP_03862	1.26e-216	xlyB	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	N-acetylmuramoyl-L-alanine amidase
PDAMAKEP_03863	5.74e-80	yjqA	-	-	S	-	-	-	Bacterial PH domain
PDAMAKEP_03864	4.92e-142	yjqB	-	-	S	-	-	-	Pfam:DUF867
PDAMAKEP_03865	1.85e-203	yjqC	-	-	P	ko:K07217	-	ko00000	Catalase
PDAMAKEP_03866	1.47e-142	xkdA	-	-	E	-	-	-	IrrE N-terminal-like domain
PDAMAKEP_03867	8.21e-74	xre	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PDAMAKEP_03869	8.8e-202	xkdB	-	-	K	-	-	-	sequence-specific DNA binding
PDAMAKEP_03870	3.55e-151	xkdC	-	-	L	-	-	-	Bacterial dnaA protein
PDAMAKEP_03874	3.17e-107	xpf	-	-	K	ko:K03088	-	ko00000,ko03021	COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
PDAMAKEP_03875	9.74e-67	xtmA	-	-	L	ko:K07474	-	ko00000	phage terminase small subunit
PDAMAKEP_03876	2.8e-88	xtmA	-	-	L	ko:K07474	-	ko00000	phage terminase small subunit
PDAMAKEP_03877	0.0	xtmB	-	-	S	ko:K06909	-	ko00000	phage terminase, large subunit
PDAMAKEP_03878	2.56e-259	yqbA	-	-	S	-	-	-	portal protein
PDAMAKEP_03879	3.77e-58	yqbA	-	-	S	-	-	-	portal protein
PDAMAKEP_03880	1.99e-176	xkdF3	-	-	L	-	-	-	Putative phage serine protease XkdF
PDAMAKEP_03881	3.91e-217	xkdG	-	-	S	-	-	-	Phage capsid family
PDAMAKEP_03882	1.63e-82	yqbG	-	-	S	-	-	-	Protein of unknown function (DUF3199)
PDAMAKEP_03883	9.76e-82	yqbH	-	-	S	-	-	-	Domain of unknown function (DUF3599)
PDAMAKEP_03884	1.13e-112	xkdI	-	-	S	-	-	-	Bacteriophage HK97-gp10, putative tail-component
PDAMAKEP_03885	2.87e-101	xkdJ	-	-	-	-	-	-	-
PDAMAKEP_03886	0.0	xkdK	-	-	S	-	-	-	Phage tail sheath C-terminal domain
PDAMAKEP_03887	6.01e-99	xkdM	-	-	S	-	-	-	Phage tail tube protein
PDAMAKEP_03888	3.34e-101	-	-	-	S	-	-	-	Phage XkdN-like tail assembly chaperone protein, TAC
PDAMAKEP_03889	0.0	xkdO	-	-	L	-	-	-	Transglycosylase SLT domain
PDAMAKEP_03890	1.77e-158	xkdP	-	-	S	-	-	-	Lysin motif
PDAMAKEP_03891	2.31e-232	xkdQ	-	-	G	-	-	-	NLP P60 protein
PDAMAKEP_03892	4.32e-53	xkdR	-	-	S	-	-	-	Protein of unknown function (DUF2577)
PDAMAKEP_03893	1.97e-92	xkdS	-	-	S	-	-	-	Protein of unknown function (DUF2634)
PDAMAKEP_03894	1.26e-243	-	-	-	S	-	-	-	Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology
PDAMAKEP_03895	6.25e-132	-	-	-	S	-	-	-	Uncharacterised protein conserved in bacteria (DUF2313)
PDAMAKEP_03896	2.56e-55	-	-	-	-	-	-	-	-
PDAMAKEP_03897	0.0	-	-	-	-	-	-	-	-
PDAMAKEP_03898	3.12e-47	xkdW	-	-	S	-	-	-	XkdW protein
PDAMAKEP_03899	9.34e-33	xkdX	-	-	-	-	-	-	-
PDAMAKEP_03900	1.39e-194	xepA	-	-	-	-	-	-	-
PDAMAKEP_03901	4.47e-51	xhlA	-	-	S	-	-	-	Haemolysin XhlA
PDAMAKEP_03902	1.35e-51	xhlB	-	-	S	-	-	-	SPP1 phage holin
PDAMAKEP_03903	1.3e-208	xlyA	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	n-acetylmuramoyl-L-alanine amidase
PDAMAKEP_03904	1.78e-31	spoIISB	-	-	S	ko:K06389	-	ko00000	Stage II sporulation protein SB
PDAMAKEP_03905	1.19e-175	spoIISA	-	-	S	ko:K06388	-	ko00000	Toxin SpoIISA, type II toxin-antitoxin system
PDAMAKEP_03906	1.54e-225	pit	-	-	P	ko:K03306	-	ko00000	phosphate transporter
PDAMAKEP_03907	1.85e-144	ykaA	-	-	P	ko:K07220	-	ko00000	COG1392 Phosphate transport regulator (distant homolog of PhoU)
PDAMAKEP_03908	4.45e-310	steT	-	-	E	ko:K03294	-	ko00000	amino acid
PDAMAKEP_03909	8.07e-233	ykcA	-	-	E	ko:K15975	-	ko00000	COG0346 Lactoylglutathione lyase and related lyases
PDAMAKEP_03910	0.0	ykcB	-	-	M	-	-	-	COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PDAMAKEP_03911	5.21e-228	ykcC	-	GT2	M	ko:K20534	-	ko00000,ko01000,ko01005,ko02000	COG0463 Glycosyltransferases involved in cell wall biogenesis
PDAMAKEP_03913	1.92e-287	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PDAMAKEP_03914	3.2e-176	proG	1.5.1.2	-	E	ko:K00286,ko:K02239	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko02044	Pyrroline-5-carboxylate reductase
PDAMAKEP_03915	1.4e-196	dppA	-	-	E	ko:K16203	-	ko00000,ko01000,ko01002	D-aminopeptidase
PDAMAKEP_03916	9.7e-204	dppB	-	-	P	ko:K16200	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PDAMAKEP_03917	3.02e-224	dppC	-	-	EP	ko:K15582,ko:K16201	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PDAMAKEP_03918	6.67e-237	dppD	-	-	P	ko:K02031,ko:K15583,ko:K16202	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PDAMAKEP_03919	0.0	dppE	-	-	E	ko:K16199	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PDAMAKEP_03921	6.76e-225	ykfA	3.4.17.13	-	V	ko:K01297	-	ko00000,ko01000,ko01002,ko01011	proteins, homologs of microcin C7 resistance protein MccF
PDAMAKEP_03922	2.68e-254	ykfB	5.1.1.20	-	M	ko:K19802	-	ko00000,ko01000	Belongs to the mandelate racemase muconate lactonizing enzyme family
PDAMAKEP_03923	1.41e-207	ykfC	3.4.14.13	-	M	ko:K20742	-	ko00000,ko01000,ko01002	COG0791 Cell wall-associated hydrolases (invasion-associated proteins)
PDAMAKEP_03924	8.44e-237	ykfD	-	-	E	ko:K02032,ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PDAMAKEP_03925	1.83e-257	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	6-phosphogluconolactonase
PDAMAKEP_03926	1.71e-203	ykgA	-	-	E	-	-	-	Amidinotransferase
PDAMAKEP_03927	1.55e-119	ykhA	-	-	I	-	-	-	Acyl-CoA hydrolase
PDAMAKEP_03928	8.15e-284	hmp	1.14.12.17, 1.18.1.3	-	C	ko:K05916,ko:K15765	ko00623,ko00920,ko01100,ko01120,ko01220,ko05132,map00623,map00920,map01100,map01120,map01220,map05132	ko00000,ko00001,ko00002,ko01000	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
PDAMAKEP_03929	5.45e-13	-	-	-	-	-	-	-	-
PDAMAKEP_03930	3.25e-166	ykjA	-	-	S	-	-	-	Protein of unknown function (DUF421)
PDAMAKEP_03931	9.11e-128	ykkA	-	-	S	-	-	-	Protein of unknown function (DUF664)
PDAMAKEP_03932	1.46e-127	ykkB	-	-	J	-	-	-	COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
PDAMAKEP_03933	7.34e-72	ykkC	-	-	P	ko:K18924	-	ko00000,ko00002,ko02000	Multidrug resistance protein
PDAMAKEP_03934	1.94e-66	ykkD	-	-	P	ko:K18925	-	ko00000,ko00002,ko02000	Multidrug resistance protein
PDAMAKEP_03935	1.66e-217	purU	3.5.1.10	-	F	ko:K01433	ko00630,ko00670,map00630,map00670	ko00000,ko00001,ko01000	Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4)
PDAMAKEP_03936	3.68e-256	proB	2.7.2.11	-	E	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PDAMAKEP_03937	5.36e-288	proA	1.2.1.41	-	E	ko:K00147	ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PDAMAKEP_03939	1.97e-92	ohrA	-	-	O	-	-	-	Organic hydroperoxide resistance protein
PDAMAKEP_03940	1.21e-98	ohrR	-	-	K	-	-	-	COG1846 Transcriptional regulators
PDAMAKEP_03941	8.15e-94	ohrB	-	-	O	-	-	-	Organic hydroperoxide resistance protein
PDAMAKEP_03942	2.06e-108	guaD	3.5.4.3	-	FJ	ko:K01487	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	COG0590 Cytosine adenosine deaminases
PDAMAKEP_03943	1.17e-128	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
PDAMAKEP_03944	0.0	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PDAMAKEP_03945	4.27e-225	isp	-	-	O	ko:K13275	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
PDAMAKEP_03946	3.99e-193	-	-	-	T	ko:K17763	-	ko00000,ko03021	COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PDAMAKEP_03947	1.55e-174	ykoC	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
PDAMAKEP_03948	0.0	ykoD	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PDAMAKEP_03949	2.81e-127	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
PDAMAKEP_03950	2.01e-141	ykoF	-	-	S	-	-	-	YKOF-related Family
PDAMAKEP_03951	4.3e-159	ykoG	-	-	T	ko:K02483	-	ko00000,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PDAMAKEP_03952	4.97e-306	ykoH	-	-	T	-	-	-	Histidine kinase
PDAMAKEP_03953	3.74e-143	ykoI	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
PDAMAKEP_03954	1.3e-111	ykoJ	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
PDAMAKEP_03955	1.45e-08	-	-	-	-	-	-	-	-
PDAMAKEP_03957	9.86e-300	mgtE	-	-	P	ko:K06213	-	ko00000,ko02000	Acts as a magnesium transporter
PDAMAKEP_03958	1.49e-70	tnrA	-	-	K	-	-	-	transcriptional
PDAMAKEP_03959	1.63e-25	-	-	-	-	-	-	-	-
PDAMAKEP_03960	2.51e-35	ykoL	-	-	-	-	-	-	-
PDAMAKEP_03961	9.83e-106	ykoM	-	-	K	ko:K15973	-	ko00000,ko03000	transcriptional
PDAMAKEP_03962	1.06e-278	ugtP	2.4.1.315	GT28	M	ko:K03429	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	COG0707 UDP-N-acetylglucosamine LPS N-acetylglucosamine transferase
PDAMAKEP_03963	3.07e-128	ykoP	-	-	G	-	-	-	polysaccharide deacetylase
PDAMAKEP_03964	7.22e-197	ykoQ	-	-	S	ko:K07098	-	ko00000	Calcineurin-like phosphoesterase superfamily domain
PDAMAKEP_03965	0.0	ykoS	-	-	-	-	-	-	-
PDAMAKEP_03966	2.23e-236	ykoT	-	-	M	-	-	-	COG0463 Glycosyltransferases involved in cell wall biogenesis
PDAMAKEP_03967	0.0	ligD	6.5.1.1	-	L	ko:K01971	ko03450,map03450	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA ligase
PDAMAKEP_03968	1.2e-202	ku	-	-	L	ko:K10979	ko03450,map03450	ko00000,ko00001,ko03400	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
PDAMAKEP_03969	1.41e-267	ykoW	2.7.7.65	-	T	ko:K21023	ko02025,map02025	ko00000,ko00001,ko01000	Diguanylate cyclase
PDAMAKEP_03970	1.73e-47	ykoW	2.7.7.65	-	T	ko:K21023	ko02025,map02025	ko00000,ko00001,ko01000	Diguanylate cyclase
PDAMAKEP_03971	1.79e-199	ykoW	2.7.7.65	-	T	ko:K21023	ko02025,map02025	ko00000,ko00001,ko01000	Diguanylate cyclase
PDAMAKEP_03972	6.94e-143	ykoX	-	-	S	-	-	-	membrane-associated protein
PDAMAKEP_03973	1.33e-226	ykoY	-	-	P	-	-	-	COG0861 Membrane protein TerC, possibly involved in tellurium resistance
PDAMAKEP_03974	1.8e-167	sigI	-	-	K	ko:K03093	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PDAMAKEP_03975	3.46e-207	rsgI	-	-	S	-	-	-	Anti-sigma factor N-terminus
PDAMAKEP_03976	1.4e-36	sspD	-	-	S	ko:K06421	-	ko00000	small acid-soluble spore protein
PDAMAKEP_03977	7.68e-160	ykrK	-	-	S	-	-	-	Domain of unknown function (DUF1836)
PDAMAKEP_03978	3.97e-199	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
PDAMAKEP_03979	1.82e-310	ktrD	-	-	P	-	-	-	COG0168 Trk-type K transport systems, membrane components
PDAMAKEP_03981	1.77e-28	ykzE	-	-	-	-	-	-	-
PDAMAKEP_03982	3.2e-242	ykrP	-	-	G	-	-	-	COG3594 Fucose 4-O-acetylase and related acetyltransferases
PDAMAKEP_03983	0.0	kinE	2.7.13.3	-	T	ko:K13533	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PDAMAKEP_03984	2.76e-115	ogt	2.1.1.63	-	L	ko:K00567,ko:K13531	-	ko00000,ko01000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PDAMAKEP_03986	1.55e-251	mtnA	5.3.1.23	-	E	ko:K08963	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
PDAMAKEP_03987	2.47e-293	mtnK	2.7.1.100	-	F	ko:K00899	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
PDAMAKEP_03988	8.12e-193	mtnU	3.5.1.3	-	S	ko:K13566	ko00250,map00250	ko00000,ko00001,ko01000	Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
PDAMAKEP_03989	2.67e-293	mtnE	-	-	E	ko:K08969,ko:K19549	ko00270,ko01100,ko01130,map00270,map01100,map01130	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
PDAMAKEP_03990	3.96e-294	mtnW	5.3.2.5	-	G	ko:K08965	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the enolization of 2,3-diketo-5- methylthiopentyl-1-phosphate (DK-MTP-1-P) into 2-hydroxy-3-keto-5- methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P)
PDAMAKEP_03991	1.77e-175	mtnX	3.1.3.87	-	E	ko:K08966	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
PDAMAKEP_03992	7.5e-146	mtnB	4.2.1.109	-	E	ko:K08964	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P)
PDAMAKEP_03993	8.7e-123	mtnD	1.13.11.53, 1.13.11.54	-	S	ko:K08967	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
PDAMAKEP_03994	3.6e-67	-	-	-	S	-	-	-	Protein of unknown function (DUF1232)
PDAMAKEP_03996	3.95e-93	eag	-	-	-	-	-	-	-
PDAMAKEP_03997	0.0	kinD	2.7.13.3	-	T	ko:K13532	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	COG0642 Signal transduction histidine kinase
PDAMAKEP_03998	5.17e-99	ykvE	-	-	K	ko:K15973	-	ko00000,ko03000	transcriptional
PDAMAKEP_03999	1.06e-166	motB	-	-	N	ko:K02557	ko02030,ko02040,map02030,map02040	ko00000,ko00001,ko02000,ko02035	Flagellar motor protein
PDAMAKEP_04000	9.19e-177	motA	-	-	N	ko:K02556	ko02020,ko02030,ko02040,map02020,map02030,map02040	ko00000,ko00001,ko02000,ko02035	flagellar motor
PDAMAKEP_04001	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	Belongs to the ClpA ClpB family
PDAMAKEP_04002	3.91e-226	ykvI	-	-	S	-	-	-	membrane
PDAMAKEP_04003	4.52e-161	queC	6.3.4.20	-	F	ko:K06920	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
PDAMAKEP_04004	6.96e-105	queD	4.1.2.50, 4.2.3.12	-	H	ko:K01737	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000,ko03016	synthase
PDAMAKEP_04005	5.91e-178	queE	4.3.99.3	-	H	ko:K10026	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
PDAMAKEP_04006	2.36e-125	queF	1.7.1.13	-	S	ko:K09457	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
PDAMAKEP_04007	2.2e-61	ykvR	-	-	S	-	-	-	Protein of unknown function (DUF3219)
PDAMAKEP_04008	5.43e-35	ykvS	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_04009	2.6e-39	-	-	-	-	-	-	-	-
PDAMAKEP_04010	1.83e-141	ykvT	3.5.1.28	-	M	ko:K01449	-	ko00000,ko01000	Cell Wall Hydrolase
PDAMAKEP_04011	1.12e-302	ykvU	-	-	S	-	-	-	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PDAMAKEP_04012	1.12e-114	stoA	-	-	CO	-	-	-	thiol-disulfide
PDAMAKEP_04013	0.0	zosA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	COG2217 Cation transport ATPase
PDAMAKEP_04014	3.99e-09	-	-	-	-	-	-	-	-
PDAMAKEP_04015	9.15e-263	ykvY	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	COG0006 Xaa-Pro aminopeptidase
PDAMAKEP_04016	2.69e-229	ykvZ	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_04018	1.39e-167	glcT	-	-	K	ko:K03480,ko:K03488	-	ko00000,ko03000	antiterminator
PDAMAKEP_04019	0.0	ptsG	2.7.1.199	-	G	ko:K02763,ko:K02764,ko:K02765,ko:K20116,ko:K20117,ko:K20118	ko00010,ko00520,ko02060,map00010,map00520,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PDAMAKEP_04020	1.51e-53	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPr
PDAMAKEP_04021	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PDAMAKEP_04022	1.54e-51	splA	-	-	S	ko:K06315	-	ko00000,ko03000	Transcriptional regulator
PDAMAKEP_04023	5.86e-255	splB	4.1.99.14	-	L	ko:K03716	-	ko00000,ko01000	Spore photoproduct lyase
PDAMAKEP_04024	1.07e-162	ykwB	-	-	K	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PDAMAKEP_04025	0.0	mcpC	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis protein
PDAMAKEP_04026	8.11e-203	glxR	1.1.1.31	-	I	ko:K00020	ko00280,ko01100,map00280,map01100	ko00000,ko00001,ko01000	COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
PDAMAKEP_04027	3.21e-305	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PDAMAKEP_04028	5.36e-172	ykwD	-	-	J	-	-	-	protein with SCP PR1 domains
PDAMAKEP_04029	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
PDAMAKEP_04030	0.0	kinA	2.7.13.3	-	T	ko:K02491	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PDAMAKEP_04031	1.7e-282	patA	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
PDAMAKEP_04032	1.05e-22	-	-	-	-	-	-	-	-
PDAMAKEP_04033	4.95e-216	cheV	-	-	T	ko:K03408,ko:K03415	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko02022,ko02035	Chemotaxis protein CheV
PDAMAKEP_04034	3.71e-110	ykyB	-	-	S	-	-	-	YkyB-like protein
PDAMAKEP_04035	7.3e-305	ykuC	-	-	EGP	-	-	-	COG0477 Permeases of the major facilitator superfamily
PDAMAKEP_04036	4.8e-114	ykuD	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_04037	9.98e-212	ykuE	-	-	S	ko:K07098	-	ko00000	Metallophosphoesterase
PDAMAKEP_04038	1.06e-181	fadH	1.3.1.34	-	IQ	ko:K00219	-	ko00000,ko01000	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PDAMAKEP_04039	0.0	ybfG	-	-	M	-	-	-	Putative peptidoglycan binding domain
PDAMAKEP_04040	6.63e-45	-	-	-	M	-	-	-	Peptidoglycan-binding domain 1 protein
PDAMAKEP_04042	2.91e-297	ykuI	-	-	T	-	-	-	Diguanylate phosphodiesterase
PDAMAKEP_04044	5.16e-50	ykuJ	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_04045	6.44e-122	-	-	-	S	ko:K09776	-	ko00000	Ribonuclease H-like
PDAMAKEP_04046	7.83e-38	ykzF	-	-	S	-	-	-	Antirepressor AbbA
PDAMAKEP_04047	2.1e-99	ykuL	-	-	S	-	-	-	CBS domain
PDAMAKEP_04048	6.52e-216	ccpC	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_04049	5.02e-110	-	-	-	C	ko:K03839	-	ko00000	Flavodoxin domain
PDAMAKEP_04050	2.12e-223	ykuO	-	-	-	-	-	-	-
PDAMAKEP_04051	6.96e-100	fld	-	-	C	ko:K03839	-	ko00000	Flavodoxin
PDAMAKEP_04052	1.31e-125	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PDAMAKEP_04053	4.43e-273	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PDAMAKEP_04054	7.23e-51	ykuS	-	-	S	-	-	-	Belongs to the UPF0180 family
PDAMAKEP_04055	2.37e-180	ykuT	-	-	M	ko:K22044	-	ko00000,ko02000	Mechanosensitive ion channel
PDAMAKEP_04056	2.31e-128	ykuU	-	-	O	-	-	-	Alkyl hydroperoxide reductase
PDAMAKEP_04057	1.47e-104	ykuV	-	-	CO	-	-	-	thiol-disulfide
PDAMAKEP_04058	4.71e-122	rok	-	-	K	-	-	-	Repressor of ComK
PDAMAKEP_04059	3.26e-72	-	-	-	L	-	-	-	transposase activity
PDAMAKEP_04060	2.88e-186	-	-	-	L	ko:K07497	-	ko00000	Molecular Function DNA binding, Biological Process DNA recombination
PDAMAKEP_04061	5.72e-199	yknT	-	-	-	ko:K06437	-	ko00000	-
PDAMAKEP_04062	1.86e-141	mobA	2.7.7.77	-	H	ko:K03752	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
PDAMAKEP_04063	8.86e-244	moeB	2.7.7.73, 2.7.7.80	-	H	ko:K03148,ko:K21029	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000	COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
PDAMAKEP_04064	5.01e-312	moeA	2.10.1.1	-	H	ko:K03750	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	molybdopterin
PDAMAKEP_04065	3.44e-122	mobB	-	-	H	ko:K03753	-	ko00000	molybdopterin-guanine dinucleotide biosynthesis protein
PDAMAKEP_04066	3.83e-109	moaE	2.8.1.12	-	H	ko:K03635	ko00790,ko01100,ko04122,map00790,map01100,map04122	ko00000,ko00001,ko01000	COG0314 Molybdopterin converting factor, large subunit
PDAMAKEP_04067	2.82e-44	moaD	-	-	H	ko:K03636	ko04122,map04122	ko00000,ko00001	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
PDAMAKEP_04068	0.0	yknU	-	-	V	ko:K06147,ko:K11085	ko02010,map02010	ko00000,ko00001,ko01000,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
PDAMAKEP_04069	0.0	yknV	-	-	V	ko:K02021,ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
PDAMAKEP_04070	1.6e-151	yknW	-	-	S	-	-	-	Yip1 domain
PDAMAKEP_04071	2.72e-232	yknX	-	-	M	ko:K02005,ko:K13888	-	ko00000,ko00002,ko02000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDAMAKEP_04072	1.23e-159	yknY	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PDAMAKEP_04073	3.88e-265	yknZ	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	COG0577 ABC-type antimicrobial peptide transport system, permease component
PDAMAKEP_04074	7.41e-176	fruR	-	-	K	ko:K03436	-	ko00000,ko03000	Transcriptional regulator
PDAMAKEP_04075	9.99e-216	pfkB	2.7.1.56	-	G	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family
PDAMAKEP_04076	0.0	fruA	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type)
PDAMAKEP_04077	1.42e-133	sipT	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PDAMAKEP_04078	7.71e-52	ykoA	-	-	-	-	-	-	-
PDAMAKEP_04079	0.0	ykpA	-	-	S	-	-	-	COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PDAMAKEP_04080	3.9e-213	panE1	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PDAMAKEP_04081	2.07e-303	pepS	-	-	E	ko:K19689	-	ko00000,ko01000,ko01002	COG2309 Leucyl aminopeptidase (aminopeptidase T)
PDAMAKEP_04082	1.09e-18	-	-	-	S	-	-	-	Uncharacterized protein YkpC
PDAMAKEP_04083	6.17e-234	mreBH	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Rod-share determining protein MreBH
PDAMAKEP_04084	2.63e-58	abrB	-	-	K	ko:K06284	-	ko00000,ko03000	of stationary sporulation gene expression
PDAMAKEP_04085	3.77e-306	kinC	2.7.13.3	-	T	ko:K07698	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	COG0642 Signal transduction histidine kinase
PDAMAKEP_04086	1.15e-196	ykqA	-	-	P	-	-	-	Gamma-glutamyl cyclotransferase, AIG2-like
PDAMAKEP_04087	1.68e-148	ktrA	-	-	P	ko:K03499	-	ko00000,ko02000	COG0569 K transport systems, NAD-binding component
PDAMAKEP_04088	0.0	ade	3.5.4.2	-	F	ko:K01486	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
PDAMAKEP_04089	0.0	rnjA	-	-	S	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PDAMAKEP_04090	8.98e-42	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
PDAMAKEP_04091	5.59e-185	ykrA	-	-	S	-	-	-	hydrolases of the HAD superfamily
PDAMAKEP_04092	3.96e-131	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PDAMAKEP_04093	2.24e-19	-	-	-	S	-	-	-	Protein of unknown function (Tiny_TM_bacill)
PDAMAKEP_04094	6.82e-149	ykyA	-	-	L	-	-	-	Putative cell-wall binding lipoprotein
PDAMAKEP_04095	1.51e-258	pdhA	1.2.4.1	-	C	ko:K00161	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
PDAMAKEP_04096	3.52e-227	pdhB	1.2.4.1	-	C	ko:K00162	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
PDAMAKEP_04097	9.88e-300	pdhC	2.3.1.12	-	C	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PDAMAKEP_04098	0.0	pdhD	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
PDAMAKEP_04099	4.55e-83	slp	-	-	CO	-	-	-	COG0526, thiol-disulfide isomerase and thioredoxins
PDAMAKEP_04100	0.0	speA	4.1.1.17, 4.1.1.19	-	E	ko:K01581,ko:K01585	ko00330,ko00480,ko01100,ko01110,ko01130,map00330,map00480,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Arginine
PDAMAKEP_04101	1.34e-56	yktA	-	-	S	-	-	-	Belongs to the UPF0223 family
PDAMAKEP_04102	5.28e-152	yktB	-	-	S	-	-	-	Belongs to the UPF0637 family
PDAMAKEP_04103	4.48e-35	ykzI	-	-	-	-	-	-	-
PDAMAKEP_04104	3.18e-193	suhB	3.1.3.25	-	G	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	ko00000,ko00001,ko00002,ko01000	Inositol monophosphatase
PDAMAKEP_04105	6.82e-78	ykzC	-	-	S	-	-	-	Acetyltransferase (GNAT) family
PDAMAKEP_04106	1.67e-219	-	-	-	Q	-	-	-	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
PDAMAKEP_04107	7.55e-59	orfX1	-	-	L	-	-	-	Transposase
PDAMAKEP_04108	5.6e-173	-	-	-	L	-	-	-	Integrase core domain
PDAMAKEP_04109	0.0	mpl	3.4.24.28, 3.4.24.29	-	E	ko:K01400,ko:K01401,ko:K19351	ko01503,ko05150,map01503,map05150	ko00000,ko00001,ko01000,ko01002	Peptidase M4
PDAMAKEP_04110	0.0	ylaA	-	-	-	-	-	-	-
PDAMAKEP_04111	1.18e-55	ylaB	-	-	-	-	-	-	-
PDAMAKEP_04112	2.93e-114	ylaC	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PDAMAKEP_04114	9.96e-57	ylaE	-	-	-	-	-	-	-
PDAMAKEP_04115	2.21e-30	-	-	-	S	-	-	-	Family of unknown function (DUF5325)
PDAMAKEP_04116	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
PDAMAKEP_04117	4.4e-63	ylaH	-	-	S	-	-	-	YlaH-like protein
PDAMAKEP_04118	8.92e-44	ylaI	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_04119	1.64e-124	ylaJ	-	-	S	-	-	-	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PDAMAKEP_04120	3.76e-316	ylaK	-	-	T	ko:K07175	-	ko00000	ATPase related to phosphate starvation-inducible protein PhoH
PDAMAKEP_04121	1.09e-110	ylaL	-	-	S	-	-	-	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
PDAMAKEP_04122	1e-218	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
PDAMAKEP_04123	6.94e-59	ylaN	-	-	S	-	-	-	Belongs to the UPF0358 family
PDAMAKEP_04124	3.2e-267	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
PDAMAKEP_04125	0.0	pyc	6.4.1.1	-	C	ko:K01958	ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
PDAMAKEP_04126	2.44e-213	ctaA	-	-	O	ko:K02259	ko00190,ko00860,ko01100,ko01110,ko02020,ko04714,map00190,map00860,map01100,map01110,map02020,map04714	ko00000,ko00001,ko00002,ko03029	Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group
PDAMAKEP_04127	1.7e-208	ctaB	2.5.1.141	-	O	ko:K02257	ko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714	ko00000,ko00001,ko00002,ko01000,ko01006,ko03029	Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group
PDAMAKEP_04128	2.38e-252	ctaC	1.9.3.1	-	C	ko:K02275	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B)
PDAMAKEP_04129	0.0	ctaD	1.9.3.1	-	C	ko:K02274	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
PDAMAKEP_04130	1.84e-145	ctaE	1.9.3.1	-	C	ko:K02276	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	COG1845 Heme copper-type cytochrome quinol oxidase, subunit 3
PDAMAKEP_04131	6.09e-70	ctaF	1.9.3.1	-	C	ko:K02277	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	COG3125 Heme copper-type cytochrome quinol oxidase, subunit 4
PDAMAKEP_04132	9.56e-211	ctaG	-	-	S	ko:K02862	-	ko00000	cytochrome c oxidase
PDAMAKEP_04133	1.88e-80	ylbA	-	-	S	-	-	-	YugN-like family
PDAMAKEP_04134	1.08e-97	ylbB	-	-	T	-	-	-	COG0517 FOG CBS domain
PDAMAKEP_04135	4.39e-256	ylbC	-	-	S	-	-	-	protein with SCP PR1 domains
PDAMAKEP_04136	3.24e-89	ylbD	-	-	S	-	-	-	Putative coat protein
PDAMAKEP_04137	1.73e-48	ylbE	-	-	S	-	-	-	YlbE-like protein
PDAMAKEP_04138	2.34e-97	ylbF	-	-	S	-	-	-	Belongs to the UPF0342 family
PDAMAKEP_04139	5.1e-51	ylbG	-	-	S	-	-	-	UPF0298 protein
PDAMAKEP_04140	9.66e-123	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	Methyltransferase
PDAMAKEP_04141	3.8e-111	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PDAMAKEP_04142	6.41e-281	ylbJ	-	-	S	-	-	-	Sporulation integral membrane protein YlbJ
PDAMAKEP_04143	2.99e-175	ylbK	-	-	S	ko:K07001	-	ko00000	esterase of the alpha-beta hydrolase superfamily
PDAMAKEP_04144	4.52e-238	ylbL	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
PDAMAKEP_04145	5.94e-301	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
PDAMAKEP_04147	6.94e-117	ylbN	-	-	S	ko:K07040	-	ko00000	metal-binding, possibly nucleic acid-binding protein
PDAMAKEP_04148	1.71e-37	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
PDAMAKEP_04149	4.72e-107	ylbO	-	-	S	ko:K06314	-	ko00000,ko03000	SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
PDAMAKEP_04150	1.33e-115	ylbP	-	-	K	-	-	-	n-acetyltransferase
PDAMAKEP_04151	5.12e-211	panE	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PDAMAKEP_04152	0.0	bshC	-	-	S	ko:K22136	-	ko00000	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
PDAMAKEP_04153	9.82e-102	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
PDAMAKEP_04154	4.76e-218	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PDAMAKEP_04155	3.42e-68	ftsL	-	-	D	-	-	-	Essential cell division protein
PDAMAKEP_04156	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
PDAMAKEP_04157	0.0	spoVD	-	-	M	ko:K08384	ko00550,map00550	ko00000,ko00001,ko01011	stage V sporulation protein D
PDAMAKEP_04158	0.0	murE	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PDAMAKEP_04159	9.59e-220	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PDAMAKEP_04160	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PDAMAKEP_04161	6.64e-237	spoVE	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
PDAMAKEP_04162	9.03e-256	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PDAMAKEP_04163	1.3e-211	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	cell wall formation
PDAMAKEP_04164	1.18e-178	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PDAMAKEP_04165	6.39e-142	ylxW	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_04166	1.5e-150	ylxX	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_04167	1.54e-75	sbp	-	-	S	-	-	-	small basic protein
PDAMAKEP_04168	4.88e-299	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PDAMAKEP_04169	1.84e-260	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PDAMAKEP_04170	0.0	bpr	-	-	O	ko:K13276	-	ko00000,ko01000,ko01002,ko03110	COG1404 Subtilisin-like serine proteases
PDAMAKEP_04171	1.21e-218	spoIIGA	-	-	M	ko:K06383	-	ko00000,ko01000,ko01002	aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR
PDAMAKEP_04172	1.48e-160	sigE	-	-	K	ko:K03091	-	ko00000,ko03021	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PDAMAKEP_04173	1.09e-177	sigG	-	-	K	ko:K03091	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PDAMAKEP_04174	1.57e-188	ylmA	3.6.3.34	-	P	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1119 ABC-type molybdenum transport system, ATPase component photorepair protein PhrA
PDAMAKEP_04175	1.81e-312	argE	-	-	E	ko:K20895	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Acetylornithine deacetylase
PDAMAKEP_04176	1.03e-50	ylmC	-	-	S	-	-	-	sporulation protein
PDAMAKEP_04177	9.17e-204	ylmD	-	-	S	ko:K05810	-	ko00000,ko01000	Belongs to the multicopper oxidase YfiH RL5 family
PDAMAKEP_04178	9.03e-162	ylmE	-	-	S	ko:K06997	-	ko00000	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PDAMAKEP_04179	4.47e-87	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PDAMAKEP_04180	1.22e-53	ylmG	-	-	S	ko:K02221	-	ko00000,ko02044	membrane
PDAMAKEP_04181	1.01e-176	ylmH	-	-	S	-	-	-	conserved protein, contains S4-like domain
PDAMAKEP_04182	6.44e-100	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	Cell division initiation protein
PDAMAKEP_04183	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PDAMAKEP_04184	1.52e-81	ylyA	-	-	T	-	-	-	COG1734 DnaK suppressor protein
PDAMAKEP_04185	2.71e-103	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PDAMAKEP_04186	3.52e-225	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PDAMAKEP_04187	4.45e-122	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PDAMAKEP_04188	1.3e-294	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Xanthine uracil
PDAMAKEP_04189	7.29e-214	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
PDAMAKEP_04190	4.86e-316	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PDAMAKEP_04191	1.31e-269	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
PDAMAKEP_04192	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the CarB family
PDAMAKEP_04193	7.44e-183	pyrK	-	-	C	ko:K02823	ko00240,ko01100,map00240,map01100	ko00000,ko00001	Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
PDAMAKEP_04194	7.36e-222	pyrD	1.3.1.14	-	F	ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PDAMAKEP_04195	6.56e-164	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PDAMAKEP_04196	8.96e-149	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PDAMAKEP_04197	4.89e-181	cysH	1.8.4.10, 1.8.4.8	-	EH	ko:K00390	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the PAPS reductase family. CysH subfamily
PDAMAKEP_04198	7.01e-228	cysP	-	-	P	ko:K16331	-	ko00000,ko02000	phosphate transporter
PDAMAKEP_04199	3.72e-285	sat	2.7.7.4	-	P	ko:K00958	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the sulfate adenylyltransferase family
PDAMAKEP_04200	1.59e-141	cysC	2.7.1.25	-	P	ko:K00860	ko00230,ko00920,ko01100,ko01120,map00230,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of activated sulfate
PDAMAKEP_04201	3.56e-186	cobA	2.1.1.107	-	H	ko:K02303	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the precorrin methyltransferase family
PDAMAKEP_04202	3.41e-186	sirB	4.99.1.4	-	S	ko:K03794	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sirohydrochlorin ferrochelatase
PDAMAKEP_04203	3.78e-107	sirC	1.3.1.76, 4.99.1.4	-	H	ko:K02304	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Siroheme synthase
PDAMAKEP_04204	0.0	FbpA	-	-	K	-	-	-	RNA-binding protein homologous to eukaryotic snRNP
PDAMAKEP_04205	0.0	yloB	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	COG0474 Cation transport ATPase
PDAMAKEP_04206	8.41e-202	yloC	-	-	S	-	-	-	stress-induced protein
PDAMAKEP_04207	3.97e-54	ylzA	-	-	S	ko:K09777	-	ko00000	Belongs to the UPF0296 family
PDAMAKEP_04208	5.73e-143	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
PDAMAKEP_04209	6.21e-39	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PDAMAKEP_04210	4.21e-285	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PDAMAKEP_04211	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PDAMAKEP_04212	8.3e-110	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PDAMAKEP_04213	3.36e-221	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PDAMAKEP_04214	0.0	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PDAMAKEP_04215	2.16e-263	rlmN	2.1.1.192	-	J	ko:K06941	-	ko00000,ko01000,ko03009	Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PDAMAKEP_04216	8.34e-179	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
PDAMAKEP_04217	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
PDAMAKEP_04218	1.37e-215	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PDAMAKEP_04219	4.68e-153	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
PDAMAKEP_04220	4.7e-156	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
PDAMAKEP_04221	7.06e-36	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
PDAMAKEP_04222	3.65e-78	yloU	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_04223	0.0	yloV	-	-	S	ko:K07030	-	ko00000	kinase related to dihydroxyacetone kinase
PDAMAKEP_04224	1.45e-153	sdaAB	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase
PDAMAKEP_04225	1.19e-201	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase
PDAMAKEP_04226	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PDAMAKEP_04227	6.22e-121	fapR	-	-	K	-	-	-	Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism
PDAMAKEP_04228	8.33e-230	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PDAMAKEP_04229	1.26e-216	fabD	2.3.1.39	-	I	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	malonyl CoA-acyl carrier protein transacylase
PDAMAKEP_04230	2.88e-166	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	reductase
PDAMAKEP_04231	1.15e-43	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PDAMAKEP_04232	2.12e-174	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PDAMAKEP_04233	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
PDAMAKEP_04234	1.96e-226	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PDAMAKEP_04235	1.34e-160	-	-	-	S	-	-	-	Phosphotransferase enzyme family
PDAMAKEP_04236	5.64e-66	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PDAMAKEP_04237	3.95e-308	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PDAMAKEP_04238	1.13e-58	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
PDAMAKEP_04239	1.2e-49	ylqC	-	-	S	ko:K06960	-	ko00000	Belongs to the UPF0109 family
PDAMAKEP_04240	9.77e-80	ylqD	-	-	S	-	-	-	YlqD protein
PDAMAKEP_04241	1.84e-122	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PDAMAKEP_04242	9.8e-177	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
PDAMAKEP_04243	8.14e-75	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PDAMAKEP_04244	1.4e-200	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PDAMAKEP_04245	3.94e-173	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDAMAKEP_04246	0.0	ylqG	-	-	-	-	-	-	-
PDAMAKEP_04247	1.7e-59	ylqH	-	-	S	ko:K04061	-	ko00000,ko02044	homolog of the cytoplasmic domain of flagellar protein FhlB
PDAMAKEP_04248	6.77e-269	sucC	6.2.1.5	-	C	ko:K01903	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
PDAMAKEP_04249	1.53e-213	sucD	6.2.1.5	-	C	ko:K01902	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
PDAMAKEP_04250	7.01e-213	dprA	-	-	LU	ko:K04096	-	ko00000	Rossmann fold nucleotide-binding protein involved in DNA uptake
PDAMAKEP_04251	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PDAMAKEP_04252	5.45e-314	trmFO	2.1.1.74	-	J	ko:K04094	-	ko00000,ko01000,ko03016,ko03036	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PDAMAKEP_04253	1.13e-217	xerC	-	-	L	ko:K03733,ko:K04763	-	ko00000,ko03036	tyrosine recombinase XerC
PDAMAKEP_04254	3.01e-120	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PDAMAKEP_04255	0.0	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PDAMAKEP_04256	1.95e-175	codY	-	-	K	ko:K03706	-	ko00000,ko03000	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
PDAMAKEP_04257	2.3e-83	flgB	-	-	N	ko:K02387	ko02040,map02040	ko00000,ko00001,ko02035	Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body
PDAMAKEP_04258	7.54e-99	flgC	-	-	N	ko:K02388	ko02040,map02040	ko00000,ko00001,ko02035	Belongs to the flagella basal body rod proteins family
PDAMAKEP_04259	5.5e-53	fliE	-	-	N	ko:K02408	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar hook-basal body
PDAMAKEP_04260	0.0	fliF	-	-	N	ko:K02409	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	The M ring may be actively involved in energy transduction
PDAMAKEP_04261	6.08e-230	fliG	-	-	N	ko:K02410	ko02030,ko02040,map02030,map02040	ko00000,ko00001,ko02035	One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation
PDAMAKEP_04262	1.11e-143	fliH	-	-	NU	ko:K02411	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	COG1317 Flagellar biosynthesis type III secretory pathway protein
PDAMAKEP_04263	1.22e-307	fliI	3.6.3.14	-	NU	ko:K02412	ko02040,map02040	ko00000,ko00001,ko01000,ko02035,ko02044	COG1157 Flagellar biosynthesis type III secretory pathway ATPase
PDAMAKEP_04264	1.03e-90	fliJ	-	-	N	ko:K02413	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar biosynthesis chaperone
PDAMAKEP_04265	2.93e-83	ylxF	-	-	S	-	-	-	MgtE intracellular N domain
PDAMAKEP_04266	2.21e-312	fliK	-	-	N	ko:K02414	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar hook-length control protein
PDAMAKEP_04267	3.28e-95	flgD	-	-	N	ko:K02389	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar basal body rod modification protein
PDAMAKEP_04268	2.1e-177	flgG	-	-	N	ko:K02390	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar basal body rod
PDAMAKEP_04269	5.59e-78	fliL	-	-	N	ko:K02415	-	ko00000,ko02035	Controls the rotational direction of flagella during chemotaxis
PDAMAKEP_04270	6.61e-231	fliM	-	-	N	ko:K02416	ko02030,ko02040,map02030,map02040	ko00000,ko00001,ko02035	One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation
PDAMAKEP_04271	1.38e-253	fliY	-	-	N	ko:K02417	ko02030,ko02040,map02030,map02040	ko00000,ko00001,ko02035,ko02044	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
PDAMAKEP_04272	1.22e-76	cheY	-	-	T	ko:K03413	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko02022,ko02035	response regulator
PDAMAKEP_04273	5.3e-135	fliZ	-	-	N	ko:K02418	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Flagellar biosynthesis protein, FliO
PDAMAKEP_04274	1.21e-141	fliP	-	-	N	ko:K02419	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Plays a role in the flagellum-specific transport system
PDAMAKEP_04275	5.23e-50	fliQ	-	-	N	ko:K02420	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Role in flagellar biosynthesis
PDAMAKEP_04276	1.47e-170	fliR	-	-	N	ko:K02421	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Flagellar biosynthetic protein FliR
PDAMAKEP_04277	7.85e-244	flhB	-	-	N	ko:K02401	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
PDAMAKEP_04278	0.0	flhA	-	-	N	ko:K02400	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
PDAMAKEP_04279	1.62e-255	flhF	-	-	N	ko:K02404	-	ko00000,ko02035	Flagellar biosynthesis regulator FlhF
PDAMAKEP_04280	1.49e-198	ylxH	-	-	D	ko:K04562	-	ko00000,ko02035	Belongs to the ParA family
PDAMAKEP_04281	2.58e-252	cheB	3.1.1.61, 3.5.1.44	-	NT	ko:K03412	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR
PDAMAKEP_04282	0.0	cheA	2.7.13.3	-	NT	ko:K03407	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035	COG0643 Chemotaxis protein histidine kinase and related kinases
PDAMAKEP_04283	1.56e-103	cheW	-	-	NT	ko:K03408	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	COG0835 Chemotaxis signal transduction protein
PDAMAKEP_04284	5.06e-144	cheC	-	-	NT	ko:K03410	ko02030,map02030	ko00000,ko00001,ko02035	COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation
PDAMAKEP_04285	1.36e-111	cheD	3.5.1.44	-	NT	ko:K03411	ko02030,map02030	ko00000,ko00001,ko01000,ko02035	Deamidates glutamine residues to glutamate on methyl- accepting chemotaxis receptors (MCPs). CheD-mediated MCP deamidation is required for productive communication of the conformational signals of the chemoreceptors to the CheA kinase
PDAMAKEP_04286	6.57e-176	sigD	-	-	K	ko:K02405	ko02020,ko02025,ko02026,ko02040,ko05111,map02020,map02025,map02026,map02040,map05111	ko00000,ko00001,ko02035,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PDAMAKEP_04287	6.62e-99	ylxL	-	-	-	-	-	-	-
PDAMAKEP_04288	1.49e-168	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
PDAMAKEP_04289	1.39e-201	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PDAMAKEP_04290	5.82e-163	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
PDAMAKEP_04291	3.91e-118	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PDAMAKEP_04292	3.84e-187	uppS	2.5.1.31	-	I	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PDAMAKEP_04293	5.77e-179	cdsA	2.7.7.41	-	S	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
PDAMAKEP_04294	1.39e-276	dxr	1.1.1.267	-	I	ko:K00099	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
PDAMAKEP_04295	6.84e-294	rasP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
PDAMAKEP_04296	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PDAMAKEP_04297	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PDAMAKEP_04298	1.34e-104	rimP	-	-	S	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
PDAMAKEP_04299	5.49e-261	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
PDAMAKEP_04300	2.86e-57	ylxR	-	-	K	ko:K07742	-	ko00000	nucleic-acid-binding protein implicated in transcription termination
PDAMAKEP_04301	6.16e-63	ylxQ	-	-	J	-	-	-	ribosomal protein
PDAMAKEP_04302	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PDAMAKEP_04303	1.58e-59	ylxP	-	-	S	ko:K09764	-	ko00000	protein conserved in bacteria
PDAMAKEP_04304	3.29e-75	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PDAMAKEP_04305	4.96e-219	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PDAMAKEP_04306	3.84e-231	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
PDAMAKEP_04307	7.11e-57	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PDAMAKEP_04308	0.0	pnp	2.7.7.8	-	J	ko:K00962	ko00230,ko00240,ko03018,map00230,map00240,map03018	ko00000,ko00001,ko00002,ko01000,ko03016,ko03019	Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
PDAMAKEP_04309	6.89e-231	ylxY	-	-	G	-	-	-	Sporulation protein, polysaccharide deacetylase
PDAMAKEP_04310	1.62e-295	mlpA	-	-	S	-	-	-	Belongs to the peptidase M16 family
PDAMAKEP_04311	1.53e-56	ymxH	-	-	S	-	-	-	YlmC YmxH family
PDAMAKEP_04312	5.3e-208	dpaA	-	-	CH	ko:K06410	-	ko00000	Dipicolinate synthase subunit A
PDAMAKEP_04313	4.73e-140	spoVFB	-	-	H	ko:K06411	-	ko00000	Together with DpaA, catalyzes the conversion of dihydrodipicolinate to dipicolinate (DPA)
PDAMAKEP_04314	1.66e-247	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PDAMAKEP_04315	4.9e-283	dapG	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
PDAMAKEP_04316	1.57e-201	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PDAMAKEP_04317	0.0	rnjB	-	-	S	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PDAMAKEP_04318	5.01e-171	tepA	-	-	OU	-	-	-	COG0740 Protease subunit of ATP-dependent Clp proteases
PDAMAKEP_04319	4.94e-44	-	-	-	S	-	-	-	YlzJ-like protein
PDAMAKEP_04320	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
PDAMAKEP_04321	1.28e-171	ymfC	-	-	K	ko:K03710	-	ko00000,ko03000	Transcriptional regulator
PDAMAKEP_04322	5.1e-266	ymfD	-	-	EGP	ko:K08221	-	ko00000,ko02000	COG0477 Permeases of the major facilitator superfamily
PDAMAKEP_04323	3.17e-297	albE	-	-	S	-	-	-	Peptidase M16
PDAMAKEP_04324	2.37e-309	ymfH	-	-	S	-	-	-	zinc protease
PDAMAKEP_04325	4.27e-166	ymfI	1.1.1.100	-	S	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
PDAMAKEP_04326	5.13e-55	ymfJ	-	-	S	-	-	-	Protein of unknown function (DUF3243)
PDAMAKEP_04327	3.91e-183	ymfK	-	-	S	-	-	-	Protein of unknown function (DUF3388)
PDAMAKEP_04328	2.29e-172	ymfM	-	-	S	ko:K15539	-	ko00000	protein conserved in bacteria
PDAMAKEP_04329	3.34e-132	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PDAMAKEP_04330	3.56e-298	cinA	3.5.1.42	-	S	ko:K03742,ko:K03743	ko00760,map00760	ko00000,ko00001,ko01000	Belongs to the CinA family
PDAMAKEP_04331	4.7e-239	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PDAMAKEP_04332	2.82e-280	pbpX	-	-	V	-	-	-	Beta-lactamase
PDAMAKEP_04333	4.25e-306	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
PDAMAKEP_04334	6.18e-195	ymdB	-	-	S	ko:K02029,ko:K02030,ko:K09769	-	ko00000,ko00002,ko02000	protein conserved in bacteria
PDAMAKEP_04335	2.44e-49	spoVS	-	-	S	ko:K06416	-	ko00000	Stage V sporulation protein S
PDAMAKEP_04336	3.38e-252	tdh	1.1.1.103	-	C	ko:K00060	ko00260,map00260	ko00000,ko00001,ko01000	Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate
PDAMAKEP_04337	5.89e-278	kbl	2.3.1.29, 2.3.1.47	-	H	ko:K00639,ko:K00652	ko00260,ko00780,ko01100,map00260,map00780,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide
PDAMAKEP_04338	0.0	miaB	2.8.4.3	-	J	ko:K06168	-	ko00000,ko01000,ko03016	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PDAMAKEP_04339	1.27e-89	ymcA	3.6.3.21	-	S	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	Belongs to the UPF0342 family
PDAMAKEP_04340	1.74e-119	cotE	-	-	S	ko:K06328	-	ko00000	Spore coat protein
PDAMAKEP_04341	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PDAMAKEP_04342	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PDAMAKEP_04343	6.4e-90	-	-	-	S	-	-	-	Regulatory protein YrvL
PDAMAKEP_04344	5.38e-125	ymcC	-	-	S	-	-	-	Membrane
PDAMAKEP_04345	4.14e-134	pksA	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_04346	8.03e-81	ymzB	-	-	-	-	-	-	-
PDAMAKEP_04347	1.88e-207	-	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
PDAMAKEP_04348	0.0	aprX	-	-	O	ko:K17734	-	ko00000,ko01000,ko01002	Belongs to the peptidase S8 family
PDAMAKEP_04350	3.96e-163	ymaC	-	-	S	-	-	-	Replication protein
PDAMAKEP_04351	5.98e-105	ymaD	-	-	O	-	-	-	redox protein, regulator of disulfide bond formation
PDAMAKEP_04352	1.57e-73	ebrB	-	-	P	ko:K03297,ko:K11814,ko:K11815	-	ko00000,ko00002,ko02000	COG2076 Membrane transporters of cations and cationic drugs
PDAMAKEP_04353	1.21e-67	ebrA	-	-	P	ko:K11814	-	ko00000,ko00002,ko02000	Small Multidrug Resistance protein
PDAMAKEP_04355	5.41e-76	ymaF	-	-	S	-	-	-	YmaF family
PDAMAKEP_04356	9.69e-224	miaA	2.5.1.75	-	J	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PDAMAKEP_04357	1.28e-45	hfq	-	-	J	ko:K03666	ko02024,ko03018,ko05111,map02024,map03018,map05111	ko00000,ko00001,ko03019,ko03036	RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs
PDAMAKEP_04358	1.63e-31	-	-	-	-	-	-	-	-
PDAMAKEP_04359	1.2e-30	ymzA	-	-	-	-	-	-	-
PDAMAKEP_04360	5.01e-66	nrdI	-	-	F	ko:K03647	-	ko00000	Probably involved in ribonucleotide reductase function
PDAMAKEP_04361	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDAMAKEP_04362	1.65e-243	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDAMAKEP_04363	2.24e-141	-	-	-	-	-	-	-	-
PDAMAKEP_04364	2.72e-148	cwlC	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	n-acetylmuramoyl-L-alanine amidase
PDAMAKEP_04365	3.46e-123	spoVK	-	-	O	ko:K06413	-	ko00000	stage V sporulation protein K
PDAMAKEP_04367	3.42e-83	-	-	-	S	-	-	-	SMI1 / KNR4 family
PDAMAKEP_04368	2.3e-72	-	-	-	S	-	-	-	DNase/tRNase domain of colicin-like bacteriocin
PDAMAKEP_04369	1.94e-166	yokF	3.1.31.1	-	L	ko:K01174	-	ko00000,ko01000	RNA catabolic process
PDAMAKEP_04370	3.98e-49	-	-	-	-	-	-	-	-
PDAMAKEP_04371	3.55e-85	-	-	-	G	-	-	-	SMI1-KNR4 cell-wall
PDAMAKEP_04372	0.0	-	-	-	L	ko:K21487	-	ko00000,ko01000,ko02048	A nuclease of the HNH/ENDO VII superfamily with conserved LHH
PDAMAKEP_04373	1.35e-111	-	-	-	S	ko:K21488	-	ko00000,ko02048	SMI1-KNR4 cell-wall
PDAMAKEP_04374	5.49e-102	-	-	-	S	-	-	-	SMI1-KNR4 cell-wall
PDAMAKEP_04375	4.47e-123	yokK	-	-	S	-	-	-	SMI1 / KNR4 family
PDAMAKEP_04376	2.06e-125	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PDAMAKEP_04380	3.21e-305	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PDAMAKEP_04381	8.09e-53	-	-	-	-	-	-	-	-
PDAMAKEP_04382	1.44e-68	-	-	-	S	-	-	-	YolD-like protein
PDAMAKEP_04383	7.8e-300	-	-	-	S	-	-	-	damaged DNA binding
PDAMAKEP_04386	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	Peptidase C39 family
PDAMAKEP_04387	3.44e-91	-	-	-	CO	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	cell redox homeostasis
PDAMAKEP_04388	6.04e-309	-	-	-	M	-	-	-	COG0463 Glycosyltransferases involved in cell wall biogenesis
PDAMAKEP_04389	5.12e-96	-	-	-	O	ko:K03611	-	ko00000,ko03110	protein disulfide oxidoreductase activity
PDAMAKEP_04390	3.04e-53	-	-	-	S	-	-	-	SPP1 phage holin
PDAMAKEP_04391	1.42e-43	bhlA	-	-	S	-	-	-	BhlA holin family
PDAMAKEP_04392	1.59e-65	-	-	-	L	-	-	-	Transposase
PDAMAKEP_04393	3.17e-176	-	-	-	L	ko:K07497	-	ko00000	COG2801 Transposase and inactivated derivatives
PDAMAKEP_04394	7.44e-257	-	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	Ami_2
PDAMAKEP_04395	2.29e-209	-	-	-	-	-	-	-	-
PDAMAKEP_04396	2.63e-282	-	-	-	M	-	-	-	Pectate lyase superfamily protein
PDAMAKEP_04397	1.39e-169	-	-	-	-	-	-	-	-
PDAMAKEP_04398	0.0	-	-	-	S	-	-	-	Pfam Transposase IS66
PDAMAKEP_04399	3.07e-109	-	-	-	S	-	-	-	Phage tail protein
PDAMAKEP_04400	3.21e-305	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PDAMAKEP_04401	0.0	-	-	-	S	-	-	-	peptidoglycan catabolic process
PDAMAKEP_04402	1.59e-65	-	-	-	L	-	-	-	Transposase
PDAMAKEP_04403	3.17e-176	-	-	-	L	ko:K07497	-	ko00000	COG2801 Transposase and inactivated derivatives
PDAMAKEP_04406	2.95e-114	-	-	-	-	-	-	-	-
PDAMAKEP_04411	1.1e-65	-	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
PDAMAKEP_04414	1.23e-43	yoaF	-	-	-	-	-	-	-
PDAMAKEP_04416	1.6e-134	-	-	-	-	-	-	-	-
PDAMAKEP_04421	1.18e-253	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PDAMAKEP_04422	0.0	-	-	-	S	-	-	-	DNA-sulfur modification-associated
PDAMAKEP_04423	2.89e-226	-	-	-	-	-	-	-	-
PDAMAKEP_04424	4.78e-46	-	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
PDAMAKEP_04429	1.78e-68	-	-	-	S	-	-	-	dUTPase
PDAMAKEP_04430	4.95e-19	-	-	-	T	-	-	-	AAA domain
PDAMAKEP_04434	1.37e-116	-	-	-	S	-	-	-	Protein of unknown function (DUF1273)
PDAMAKEP_04441	1.75e-188	ligB	6.5.1.1, 6.5.1.6, 6.5.1.7	-	L	ko:K01971,ko:K10747	ko03030,ko03410,ko03420,ko03430,ko03450,map03030,map03410,map03420,map03430,map03450	ko00000,ko00001,ko01000,ko03032,ko03400	ATP-dependent DNA ligase
PDAMAKEP_04443	8.64e-197	-	-	-	-	-	-	-	-
PDAMAKEP_04452	1.94e-179	-	-	-	L	-	-	-	Participates in initiation and elongation during chromosome replication
PDAMAKEP_04453	3.93e-65	-	-	-	S	-	-	-	DNA primase activity
PDAMAKEP_04454	6.95e-145	-	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
PDAMAKEP_04455	2.97e-07	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PDAMAKEP_04456	2.08e-151	-	-	-	S	-	-	-	protein conserved in bacteria
PDAMAKEP_04461	5.53e-106	tmk	2.1.1.45, 2.7.4.9	-	F	ko:K00560,ko:K00943	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	dTDP biosynthetic process
PDAMAKEP_04466	5.24e-85	nrdI	-	-	F	ko:K03647	-	ko00000	Probably involved in ribonucleotide reductase function
PDAMAKEP_04467	5.48e-155	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDAMAKEP_04468	2.45e-24	-	-	-	S	-	-	-	sequence-specific DNA binding transcription factor activity
PDAMAKEP_04469	1.26e-288	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDAMAKEP_04470	5.88e-73	-	-	-	S	-	-	-	Protein of unknown function (DUF1140)
PDAMAKEP_04471	3.18e-129	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDAMAKEP_04472	0.000401	-	-	-	-	-	-	-	-
PDAMAKEP_04473	3.4e-85	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDAMAKEP_04474	2.65e-48	-	-	-	O	-	-	-	Glutaredoxin
PDAMAKEP_04476	2.11e-97	yncF	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Deoxyuridine 5'-triphosphate
PDAMAKEP_04477	3.21e-305	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PDAMAKEP_04482	1.26e-206	-	-	-	S	-	-	-	Thymidylate synthase
PDAMAKEP_04483	8.96e-38	dfrA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PDAMAKEP_04485	1.35e-44	-	-	-	-	-	-	-	-
PDAMAKEP_04487	1.84e-40	-	-	-	S	ko:K06418,ko:K06419,ko:K06420	-	ko00000	spore protein
PDAMAKEP_04494	1.62e-116	-	-	-	L	-	-	-	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PDAMAKEP_04496	5.06e-306	-	-	-	L	ko:K06400	-	ko00000	Recombinase
PDAMAKEP_04497	1.09e-88	spoVK	-	-	O	ko:K06413	-	ko00000	stage V sporulation protein K
PDAMAKEP_04498	1.82e-293	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PDAMAKEP_04499	1.37e-309	ynbB	-	-	P	-	-	-	COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance
PDAMAKEP_04500	9.94e-90	glnR	-	-	K	ko:K03713,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000,ko03000	transcriptional
PDAMAKEP_04501	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
PDAMAKEP_04502	1.11e-170	int	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PDAMAKEP_04503	7.37e-56	-	-	-	E	-	-	-	Zn peptidase
PDAMAKEP_04504	2.3e-33	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PDAMAKEP_04506	2.1e-31	-	-	-	-	-	-	-	-
PDAMAKEP_04508	1.82e-104	-	-	-	S	ko:K07741	-	ko00000	Phage regulatory protein Rha (Phage_pRha)
PDAMAKEP_04511	3.97e-109	-	-	-	L	-	-	-	DnaD domain protein
PDAMAKEP_04512	4.87e-18	-	-	-	S	-	-	-	Loader and inhibitor of phage G40P
PDAMAKEP_04513	9.37e-212	-	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	replicative DNA helicase
PDAMAKEP_04514	3.79e-32	-	-	-	-	-	-	-	-
PDAMAKEP_04516	3.01e-12	-	-	-	S	-	-	-	Phage-like element PBSX protein XtrA
PDAMAKEP_04517	3.23e-69	-	-	-	M	-	-	-	ArpU family transcriptional regulator
PDAMAKEP_04518	1.6e-94	-	-	-	L	-	-	-	Phage integrase family
PDAMAKEP_04520	3.61e-36	cotD	-	-	S	ko:K06327	-	ko00000	Inner spore coat protein D
PDAMAKEP_04521	4.22e-30	-	-	-	S	ko:K06327	-	ko00000	Inner spore coat protein D
PDAMAKEP_04523	5.83e-38	-	-	-	-	-	-	-	-
PDAMAKEP_04526	1.14e-64	-	-	-	V	ko:K07451	-	ko00000,ko01000,ko02048	HNH endonuclease
PDAMAKEP_04528	5.19e-102	-	-	-	L	-	-	-	phage terminase small subunit
PDAMAKEP_04529	0.0	-	-	-	S	-	-	-	Terminase
PDAMAKEP_04531	2.17e-302	-	-	-	S	-	-	-	Phage portal protein
PDAMAKEP_04532	3.04e-151	-	-	-	OU	-	-	-	Belongs to the peptidase S14 family
PDAMAKEP_04533	2.45e-263	-	-	-	S	-	-	-	capsid protein
PDAMAKEP_04534	1.27e-30	-	-	-	-	-	-	-	-
PDAMAKEP_04535	5.93e-52	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
PDAMAKEP_04536	3.02e-51	-	-	-	S	-	-	-	Phage head-tail joining protein
PDAMAKEP_04537	4.86e-66	-	-	-	S	-	-	-	Bacteriophage HK97-gp10, putative tail-component
PDAMAKEP_04539	7.58e-100	-	-	-	S	-	-	-	Phage tail tube protein
PDAMAKEP_04542	0.0	-	-	-	D	-	-	-	phage tail tape measure protein
PDAMAKEP_04543	1.02e-155	-	-	-	D	-	-	-	phage tail tape measure protein
PDAMAKEP_04544	2.06e-143	-	-	-	S	-	-	-	Phage tail protein
PDAMAKEP_04545	3.87e-275	acm2	3.2.1.17	-	NU	ko:K01185	-	ko00000,ko01000	Prophage endopeptidase tail
PDAMAKEP_04546	0.0	-	-	-	S	-	-	-	Peptidase_G2, IMC autoproteolytic cleavage domain
PDAMAKEP_04547	6.02e-173	-	-	-	S	-	-	-	Domain of unknown function (DUF2479)
PDAMAKEP_04549	5.37e-13	-	-	-	S	-	-	-	Phage uncharacterised protein (Phage_XkdX)
PDAMAKEP_04550	2.18e-75	-	-	-	S	-	-	-	Bacteriophage holin family
PDAMAKEP_04551	4.29e-164	xlyB	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	N-acetylmuramoyl-L-alanine amidase
PDAMAKEP_04552	1.25e-30	-	-	-	S	-	-	-	SMI1-KNR4 cell-wall
PDAMAKEP_04553	1.37e-195	-	-	-	S	-	-	-	Bacterial EndoU nuclease
PDAMAKEP_04554	1.04e-134	rapK	-	-	S	ko:K06369	ko02024,map02024	ko00000,ko00001,ko01000	aspartate phosphatase
PDAMAKEP_04558	3.69e-32	-	-	-	-	-	-	-	-
PDAMAKEP_04559	1.68e-53	-	-	-	-	-	-	-	-
PDAMAKEP_04560	4.6e-309	-	-	-	M	-	-	-	nucleic acid phosphodiester bond hydrolysis
PDAMAKEP_04562	1.68e-13	-	-	-	-	-	-	-	-
PDAMAKEP_04564	1.46e-105	-	-	-	-	-	-	-	-
PDAMAKEP_04565	4.13e-51	-	-	-	-	-	-	-	-
PDAMAKEP_04566	8.29e-101	-	-	-	G	-	-	-	SMI1-KNR4 cell-wall
PDAMAKEP_04567	9.3e-51	ynaC	-	-	-	-	-	-	-
PDAMAKEP_04568	5.43e-116	ynaC	-	-	-	-	-	-	-
PDAMAKEP_04569	5.18e-120	ynaD	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PDAMAKEP_04570	1.59e-65	-	-	-	L	-	-	-	Transposase
PDAMAKEP_04571	3.17e-176	-	-	-	L	ko:K07497	-	ko00000	COG2801 Transposase and inactivated derivatives
PDAMAKEP_04572	1.78e-110	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PDAMAKEP_04573	3.17e-176	-	-	-	L	ko:K07497	-	ko00000	COG2801 Transposase and inactivated derivatives
PDAMAKEP_04574	1.59e-65	-	-	-	L	-	-	-	Transposase
PDAMAKEP_04575	8.91e-172	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PDAMAKEP_04576	7.23e-99	hsp	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Hsp20/alpha crystallin family
PDAMAKEP_04577	4.64e-300	pre	-	-	D	-	-	-	plasmid recombination enzyme
PDAMAKEP_04578	6.29e-100	-	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_04580	2.37e-228	-	-	-	L	-	-	-	Replication protein
PDAMAKEP_04584	1.81e-108	-	-	-	K	-	-	-	Transcriptional regulator
PDAMAKEP_04585	6.84e-48	pre	-	-	D	-	-	-	plasmid recombination enzyme
PDAMAKEP_04588	8.58e-32	pre	-	-	D	-	-	-	plasmid recombination enzyme
PDAMAKEP_04589	1.01e-48	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0715)
PDAMAKEP_04590	3.09e-213	-	-	-	S	-	-	-	Protein of unknown function (DUF3238)
PDAMAKEP_04591	4.78e-228	-	-	-	L	-	-	-	Replication protein