Read a JSON File

ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
PNNFFKII_00001	2.02e-110	soj	-	-	D	-	-	-	CobQ CobB MinD ParA nucleotide binding domain protein
PNNFFKII_00002	1.63e-134	repE	-	-	K	-	-	-	Primase C terminal 1 (PriCT-1)
PNNFFKII_00003	1.07e-40	-	-	-	S	-	-	-	Protein of unknown function (DUF3102)
PNNFFKII_00013	3.78e-60	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
PNNFFKII_00014	8.94e-178	butA	1.1.1.304, 1.1.1.76	-	IQ	ko:K03366	ko00650,map00650	ko00000,ko00001,ko01000	reductase
PNNFFKII_00015	2.58e-42	-	-	-	L	-	-	-	Transposase
PNNFFKII_00017	5.65e-49	-	-	-	E	-	-	-	DNA primase activity
PNNFFKII_00019	4.2e-97	topB	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	Bacterial DNA topoisomeraes I ATP-binding domain
PNNFFKII_00021	3.44e-167	-	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	C-terminal, D2-small domain, of ClpB protein
PNNFFKII_00025	1.96e-133	-	-	-	U	ko:K03205	ko03070,map03070	ko00000,ko00001,ko00002,ko02044	TraM recognition site of TraD and TraG
PNNFFKII_00026	2.38e-31	-	-	-	T	-	-	-	PFAM SpoVT AbrB
PNNFFKII_00027	6.54e-46	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
PNNFFKII_00028	9.89e-20	-	-	-	K	-	-	-	Helix-turn-helix domain
PNNFFKII_00034	2.05e-126	-	-	-	U	-	-	-	type IV secretory pathway VirB4
PNNFFKII_00038	4.25e-220	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_00039	8.44e-121	epsB	-	-	M	-	-	-	biosynthesis protein
PNNFFKII_00040	1.12e-168	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
PNNFFKII_00041	1.17e-178	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
PNNFFKII_00042	2.02e-109	rfbP	-	-	M	ko:K13012,ko:K19428	-	ko00000,ko01000,ko01005	Bacterial sugar transferase
PNNFFKII_00043	9.67e-250	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_00044	1.15e-36	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PNNFFKII_00045	2.21e-218	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
PNNFFKII_00046	6.7e-142	-	-	-	L	ko:K07482	-	ko00000	Transposase and inactivated derivatives, IS30 family
PNNFFKII_00047	9.84e-281	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
PNNFFKII_00048	2.79e-53	rfbP	-	-	M	ko:K13012,ko:K19428	-	ko00000,ko01000,ko01005	Bacterial sugar transferase
PNNFFKII_00049	5.8e-46	-	-	-	L	-	-	-	Putative transposase of IS4/5 family (DUF4096)
PNNFFKII_00050	5.81e-88	-	-	-	L	-	-	-	Transposase
PNNFFKII_00051	6.57e-73	-	-	-	M	-	-	-	Glycosyl transferase 4-like
PNNFFKII_00052	2.52e-283	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
PNNFFKII_00053	3.24e-267	-	-	-	L	-	-	-	Transposase DDE domain
PNNFFKII_00054	1.5e-16	-	-	-	-	-	-	-	-
PNNFFKII_00055	2.7e-56	-	-	-	L	-	-	-	Transposase DDE domain
PNNFFKII_00056	4.94e-44	-	-	-	M	-	-	-	Glycosyl transferase 4-like domain
PNNFFKII_00057	1.45e-116	-	-	-	M	-	-	-	Polysaccharide pyruvyl transferase
PNNFFKII_00058	2.26e-45	-	-	-	M	-	-	-	Capsular polysaccharide synthesis protein
PNNFFKII_00059	4.3e-11	-	2.7.8.12	GT2	S	ko:K09809,ko:K19427	-	ko00000,ko01000	Glycosyl transferase family 2
PNNFFKII_00060	4.09e-16	-	-	-	M	-	-	-	Glycosyltransferase like family 2
PNNFFKII_00061	2.79e-46	-	-	-	C	-	-	-	Psort location Cytoplasmic, score 8.87
PNNFFKII_00062	1.24e-55	-	-	-	S	-	-	-	Core-2/I-Branching enzyme
PNNFFKII_00063	7.93e-163	cps1C	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
PNNFFKII_00065	6.3e-222	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_00066	1.76e-72	-	-	-	L	ko:K07483,ko:K09936	ko02024,map02024	ko00000,ko00001,ko02000	Helix-turn-helix domain
PNNFFKII_00067	1.47e-163	-	-	-	L	-	-	-	PFAM Integrase catalytic region
PNNFFKII_00068	8.99e-120	-	-	-	L	-	-	-	4.5 Transposon and IS
PNNFFKII_00069	1.15e-52	-	-	-	L	ko:K07483	-	ko00000	Transposase
PNNFFKII_00071	1.96e-225	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_00072	2.65e-73	-	-	-	L	-	-	-	recombinase activity
PNNFFKII_00074	5.06e-138	-	-	-	S	-	-	-	MobA/MobL family
PNNFFKII_00077	7.07e-27	-	-	-	-	-	-	-	-
PNNFFKII_00078	7.13e-17	-	-	-	S	-	-	-	Protein of unknown function (DUF3278)
PNNFFKII_00080	1.66e-234	comA	-	-	V	ko:K06148,ko:K20344	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PNNFFKII_00083	6.27e-29	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PNNFFKII_00087	6.67e-57	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PNNFFKII_00088	9.18e-49	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain protein YaaA
PNNFFKII_00089	2.97e-267	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PNNFFKII_00090	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PNNFFKII_00091	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PNNFFKII_00092	1.36e-65	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
PNNFFKII_00093	5.15e-104	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PNNFFKII_00094	1.33e-47	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PNNFFKII_00095	2.68e-296	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
PNNFFKII_00096	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
PNNFFKII_00097	5.87e-181	-	-	-	-	-	-	-	-
PNNFFKII_00098	2.37e-294	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
PNNFFKII_00099	6.35e-240	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
PNNFFKII_00100	3.46e-116	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
PNNFFKII_00101	2.56e-129	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PNNFFKII_00102	4.07e-52	-	-	-	S	-	-	-	response to heat
PNNFFKII_00103	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
PNNFFKII_00104	2.22e-92	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
PNNFFKII_00106	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
PNNFFKII_00107	1.77e-130	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
PNNFFKII_00108	8.62e-269	yttB	-	-	EGP	-	-	-	Major Facilitator
PNNFFKII_00109	1.68e-37	-	-	-	-	-	-	-	-
PNNFFKII_00110	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
PNNFFKII_00111	1.43e-52	-	-	-	-	-	-	-	-
PNNFFKII_00112	1.09e-165	-	-	-	E	-	-	-	Matrixin
PNNFFKII_00114	1.19e-170	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
PNNFFKII_00115	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PNNFFKII_00116	4.78e-307	yycH	-	-	S	-	-	-	YycH protein
PNNFFKII_00117	2.67e-190	yycI	-	-	S	-	-	-	YycH protein
PNNFFKII_00118	2.33e-200	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
PNNFFKII_00119	3.98e-272	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
PNNFFKII_00120	3.01e-107	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PNNFFKII_00122	0.000134	mrsA1	1.8.4.11	-	O	ko:K07304	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PNNFFKII_00123	2.69e-226	-	-	-	L	ko:K07482	-	ko00000	Integrase core domain
PNNFFKII_00124	1.47e-289	-	-	-	L	-	-	-	Transposase
PNNFFKII_00125	0.0	XK27_00340	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PNNFFKII_00126	1.57e-63	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PNNFFKII_00127	8.29e-64	-	-	-	L	-	-	-	Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
PNNFFKII_00129	6.85e-226	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_00130	6.27e-173	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PNNFFKII_00131	4.8e-224	draG	-	-	O	-	-	-	ADP-ribosylglycohydrolase
PNNFFKII_00132	7.74e-33	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
PNNFFKII_00133	8.62e-85	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
PNNFFKII_00135	2.45e-128	cadD	-	-	P	-	-	-	Cadmium resistance transporter
PNNFFKII_00136	3.26e-101	-	-	-	K	ko:K03827	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
PNNFFKII_00137	3.07e-143	-	-	-	L	ko:K07497	-	ko00000	PFAM Integrase catalytic region
PNNFFKII_00138	2.62e-89	-	-	-	L	ko:K07483,ko:K07497	-	ko00000	Helix-turn-helix domain
PNNFFKII_00139	1.09e-106	-	-	-	S	-	-	-	GtrA-like protein
PNNFFKII_00140	5e-294	-	-	-	L	-	-	-	Transposase
PNNFFKII_00141	2.48e-109	-	-	-	L	ko:K07483,ko:K07497	-	ko00000	Helix-turn-helix domain
PNNFFKII_00142	1.82e-162	-	-	-	L	ko:K07497	-	ko00000	PFAM Integrase catalytic region
PNNFFKII_00143	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
PNNFFKII_00144	3.86e-149	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PNNFFKII_00145	2.71e-297	-	-	-	S	ko:K01421	-	ko00000	ABC-2 family transporter protein
PNNFFKII_00146	1.73e-185	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
PNNFFKII_00147	4.14e-72	-	-	-	S	-	-	-	protein encoded in hypervariable junctions of pilus gene clusters
PNNFFKII_00148	4.47e-174	-	-	-	-	-	-	-	-
PNNFFKII_00149	1.66e-128	-	-	-	S	ko:K09962	-	ko00000	Nucleotidyltransferase
PNNFFKII_00150	2.44e-110	-	-	-	S	-	-	-	Protein of unknown function (DUF2798)
PNNFFKII_00151	2.19e-75	yuxO	-	-	Q	-	-	-	Thioesterase superfamily
PNNFFKII_00152	2.33e-199	menB	4.1.3.36	-	H	ko:K01661	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PNNFFKII_00153	0.0	menE	6.2.1.26	-	H	ko:K01911	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
PNNFFKII_00154	1.44e-122	-	-	-	S	-	-	-	Protein of unknown function (DUF1097)
PNNFFKII_00155	6.44e-213	-	-	-	-	-	-	-	-
PNNFFKII_00156	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PNNFFKII_00157	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
PNNFFKII_00158	3.78e-270	-	-	-	E	-	-	-	Major Facilitator Superfamily
PNNFFKII_00161	2.68e-129	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PNNFFKII_00162	4.13e-231	-	-	-	C	-	-	-	nadph quinone reductase
PNNFFKII_00163	5.55e-137	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PNNFFKII_00164	0.0	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
PNNFFKII_00165	0.0	-	4.1.1.15, 4.1.2.27	-	E	ko:K01580,ko:K01634	ko00250,ko00410,ko00430,ko00600,ko00650,ko01100,ko01110,ko01120,ko02024,ko04071,ko04727,ko04940,map00250,map00410,map00430,map00600,map00650,map01100,map01110,map01120,map02024,map04071,map04727,map04940	ko00000,ko00001,ko00002,ko01000	Belongs to the group II decarboxylase family
PNNFFKII_00166	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PNNFFKII_00168	2.12e-222	-	-	-	-	-	-	-	-
PNNFFKII_00169	3.25e-291	gltT	-	-	U	ko:K03309,ko:K11102	-	ko00000,ko02000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PNNFFKII_00170	1.7e-301	-	-	-	L	-	-	-	Transposase
PNNFFKII_00171	4.81e-138	ahpC	1.11.1.15	-	O	ko:K03386	ko04214,map04214	ko00000,ko00001,ko01000,ko04147	Peroxiredoxin
PNNFFKII_00172	1.84e-80	-	-	-	-	-	-	-	-
PNNFFKII_00173	1.66e-147	-	-	-	GM	-	-	-	NAD(P)H-binding
PNNFFKII_00174	3.28e-61	-	-	-	-	-	-	-	-
PNNFFKII_00176	5.81e-63	-	-	-	K	-	-	-	Helix-turn-helix domain
PNNFFKII_00179	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PNNFFKII_00180	4.64e-96	-	-	-	K	-	-	-	Transcriptional regulator
PNNFFKII_00181	3.49e-102	-	-	-	S	ko:K02348	-	ko00000	Gnat family
PNNFFKII_00182	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PNNFFKII_00183	1.65e-204	-	2.3.1.81	-	V	ko:K00662	-	ko00000,ko01000,ko01504	Aminoglycoside 3-N-acetyltransferase
PNNFFKII_00184	1.85e-204	-	1.1.1.65	-	C	ko:K05275	ko00750,ko01100,ko01120,map00750,map01100,map01120	ko00000,ko00001,ko01000	Aldo keto reductase
PNNFFKII_00185	3.88e-149	-	-	-	-	-	-	-	-
PNNFFKII_00186	1.13e-273	yttB	-	-	EGP	-	-	-	Major Facilitator
PNNFFKII_00187	6.13e-313	glpT	-	-	G	ko:K02445	-	ko00000,ko02000	Major Facilitator Superfamily
PNNFFKII_00188	1.38e-174	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
PNNFFKII_00189	1.39e-111	nrdI	-	-	F	ko:K03647	-	ko00000	Belongs to the NrdI family
PNNFFKII_00190	0.0	-	-	-	S	ko:K18231,ko:K19349	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ATPases associated with a variety of cellular activities
PNNFFKII_00191	0.0	lmrB	-	-	U	ko:K18926	-	ko00000,ko00002,ko02000	Belongs to the major facilitator superfamily
PNNFFKII_00193	8.38e-185	kduD	1.1.1.127	-	IQ	ko:K00065	ko00040,map00040	ko00000,ko00001,ko01000	Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PNNFFKII_00194	3.8e-225	-	-	-	K	ko:K02525	-	ko00000,ko03000	Transcriptional regulator, LacI family
PNNFFKII_00195	4.06e-315	yhdP	-	-	S	-	-	-	Transporter associated domain
PNNFFKII_00196	1.62e-80	-	-	-	-	-	-	-	-
PNNFFKII_00197	5.23e-97	hsp1	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
PNNFFKII_00198	0.0	-	-	-	E	-	-	-	Amino Acid
PNNFFKII_00199	2.74e-207	yvgN	-	-	S	-	-	-	Aldo keto reductase
PNNFFKII_00200	6.97e-05	-	-	-	-	-	-	-	-
PNNFFKII_00201	0.0	yfgQ	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
PNNFFKII_00202	3.57e-120	-	-	-	K	-	-	-	Domain of unknown function (DUF1836)
PNNFFKII_00203	8.94e-221	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PNNFFKII_00204	0.0	glpQ4	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	phosphodiesterase
PNNFFKII_00205	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
PNNFFKII_00206	3.32e-122	-	-	-	M	-	-	-	LysM domain protein
PNNFFKII_00207	0.0	-	-	-	M	-	-	-	Leucine-rich repeat (LRR) protein
PNNFFKII_00208	4.7e-88	-	-	-	M	-	-	-	LysM domain protein
PNNFFKII_00210	3.71e-76	lysM	-	-	M	-	-	-	LysM domain
PNNFFKII_00212	1.47e-50	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PNNFFKII_00213	8.22e-213	kduI	5.3.1.17	-	G	ko:K01815	ko00040,map00040	ko00000,ko00001,ko01000	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
PNNFFKII_00214	2.11e-224	kdgK	2.7.1.45	-	G	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	pfkB family carbohydrate kinase
PNNFFKII_00215	1.06e-277	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PNNFFKII_00216	1.17e-75	-	-	-	S	-	-	-	3D domain
PNNFFKII_00217	0.0	-	-	-	M	ko:K01992	-	ko00000,ko00002,ko02000	Exporter of polyketide antibiotics
PNNFFKII_00218	3.62e-215	ybhF_1	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
PNNFFKII_00219	1.76e-153	yagB	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
PNNFFKII_00220	0.0	-	-	-	V	-	-	-	MatE
PNNFFKII_00221	0.0	uxaC	5.3.1.12	-	G	ko:K01812	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	glucuronate isomerase
PNNFFKII_00222	0.0	-	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
PNNFFKII_00223	0.0	-	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
PNNFFKII_00224	0.0	uidA	3.2.1.31	-	G	ko:K01195	ko00040,ko00531,ko00860,ko00944,ko00983,ko01100,ko01110,ko04142,map00040,map00531,map00860,map00944,map00983,map01100,map01110,map04142	ko00000,ko00001,ko00002,ko01000	Belongs to the glycosyl hydrolase 2 family
PNNFFKII_00225	0.0	uxuB	1.1.1.57	-	G	ko:K00040	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Mannitol dehydrogenase C-terminal domain
PNNFFKII_00226	8.57e-216	yqhA	-	-	G	-	-	-	Aldose 1-epimerase
PNNFFKII_00227	3.17e-157	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
PNNFFKII_00228	1.41e-240	-	-	-	C	-	-	-	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PNNFFKII_00229	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
PNNFFKII_00230	2.36e-217	gntZ	1.1.1.343, 1.1.1.44	-	G	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Dehydrogenase
PNNFFKII_00231	3.03e-166	-	-	-	K	-	-	-	FCD domain
PNNFFKII_00232	1.72e-270	uxuA	4.2.1.8	-	G	ko:K01686	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the dehydration of D-mannonate
PNNFFKII_00233	7.46e-234	exuR	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding protein domain
PNNFFKII_00234	0.0	-	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
PNNFFKII_00235	0.0	-	5.1.2.7	-	S	ko:K21619	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	tagaturonate epimerase
PNNFFKII_00236	0.0	uxaC	5.3.1.12	-	G	ko:K01812	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	glucuronate isomerase
PNNFFKII_00237	2.65e-287	-	-	-	S	-	-	-	module of peptide synthetase
PNNFFKII_00239	0.0	-	-	-	EGP	-	-	-	Major Facilitator
PNNFFKII_00242	2.65e-177	-	-	-	-	-	-	-	-
PNNFFKII_00243	1.42e-118	ebsC	-	-	J	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PNNFFKII_00244	3.02e-170	gntR1	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
PNNFFKII_00246	1.26e-108	zmp3	-	-	O	-	-	-	Zinc-dependent metalloprotease
PNNFFKII_00247	1.43e-101	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PNNFFKII_00248	1.29e-92	-	-	-	-	-	-	-	-
PNNFFKII_00249	4.29e-175	agrA	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
PNNFFKII_00250	7.55e-256	pltK	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
PNNFFKII_00251	2.55e-266	-	-	-	T	-	-	-	protein histidine kinase activity
PNNFFKII_00252	6.78e-165	-	-	-	IQ	-	-	-	Oxidoreductase, short chain dehydrogenase reductase family protein
PNNFFKII_00254	2.18e-215	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
PNNFFKII_00255	1.4e-99	uspA3	-	-	T	-	-	-	universal stress protein
PNNFFKII_00256	3.17e-131	yeaB	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PNNFFKII_00257	3.79e-190	-	-	-	EGP	-	-	-	Major Facilitator
PNNFFKII_00258	1.68e-63	-	-	-	K	-	-	-	transcriptional regulator
PNNFFKII_00259	0.0	oppA1	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PNNFFKII_00260	3.95e-224	oppC	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PNNFFKII_00261	1.14e-229	oppB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PNNFFKII_00262	8.35e-230	oppF	-	-	P	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PNNFFKII_00263	2.64e-244	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PNNFFKII_00264	6.65e-104	-	-	-	K	-	-	-	Winged helix-turn-helix transcription repressor, HrcA DNA-binding
PNNFFKII_00265	6.05e-250	lplA	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Lipoate-protein ligase
PNNFFKII_00266	8.07e-91	-	-	-	-	-	-	-	-
PNNFFKII_00267	3.3e-63	-	-	-	-	-	-	-	-
PNNFFKII_00268	0.0	xylA	5.3.1.5	-	G	ko:K01805	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko01000	Belongs to the xylose isomerase family
PNNFFKII_00269	0.0	xylB	2.7.1.17	-	G	ko:K00854	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Xylulose kinase
PNNFFKII_00270	9.47e-287	xylT	-	-	EGP	-	-	-	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PNNFFKII_00271	7.71e-182	budC	1.1.1.304, 1.1.1.76	-	IQ	ko:K03366	ko00650,map00650	ko00000,ko00001,ko01000	reductase
PNNFFKII_00272	1.52e-90	frataxin	-	-	S	ko:K05937	-	ko00000	Domain of unknown function (DU1801)
PNNFFKII_00273	0.0	-	-	-	S	-	-	-	membrane
PNNFFKII_00274	6.41e-118	usp5	-	-	T	-	-	-	universal stress protein
PNNFFKII_00275	2.26e-125	yxkA	-	-	S	ko:K06910	-	ko00000	Phosphatidylethanolamine-binding protein
PNNFFKII_00276	8.35e-277	-	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
PNNFFKII_00277	1.35e-162	-	-	-	P	ko:K10716	-	ko00000,ko02000	Ion channel
PNNFFKII_00278	2.16e-77	-	-	-	-	-	-	-	-
PNNFFKII_00279	1.25e-216	-	-	-	C	-	-	-	Aldo keto reductase
PNNFFKII_00280	3.82e-91	-	-	-	-	-	-	-	-
PNNFFKII_00281	1.98e-123	-	-	-	S	-	-	-	Acetyltransferase (GNAT) family
PNNFFKII_00282	0.0	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
PNNFFKII_00283	5.11e-243	-	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
PNNFFKII_00284	7.56e-242	idhA	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PNNFFKII_00285	0.0	yufL	2.7.13.3	-	T	ko:K02476,ko:K11614	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Single cache domain 3
PNNFFKII_00286	3.93e-160	dctR	-	-	K	ko:K02475,ko:K11692	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	cheY-homologous receiver domain
PNNFFKII_00287	3.34e-276	-	-	-	S	-	-	-	ABC-2 family transporter protein
PNNFFKII_00288	5.04e-130	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PNNFFKII_00289	2.83e-159	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
PNNFFKII_00290	2.24e-123	-	-	-	K	-	-	-	Acetyltransferase (GNAT) family
PNNFFKII_00291	1.15e-181	-	-	-	S	-	-	-	zinc-ribbon domain
PNNFFKII_00292	0.0	-	-	-	S	-	-	-	response to antibiotic
PNNFFKII_00294	7.49e-110	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
PNNFFKII_00296	4.33e-132	padC	-	-	Q	ko:K13727	-	ko00000,ko01000	Phenolic acid decarboxylase
PNNFFKII_00297	1.64e-108	padR	-	-	K	-	-	-	Virulence activator alpha C-term
PNNFFKII_00298	2.28e-132	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PNNFFKII_00299	1.25e-239	-	1.1.1.219	-	GM	ko:K00091	-	ko00000,ko01000	Male sterility protein
PNNFFKII_00300	5.15e-100	-	-	-	S	ko:K02348	-	ko00000	Gnat family
PNNFFKII_00301	5.75e-103	yybA	-	-	K	-	-	-	Transcriptional regulator
PNNFFKII_00302	1.83e-96	-	-	-	-	-	-	-	-
PNNFFKII_00303	5.74e-120	-	-	-	-	-	-	-	-
PNNFFKII_00304	2.87e-126	-	-	-	P	-	-	-	Cadmium resistance transporter
PNNFFKII_00305	4.7e-157	-	-	-	K	ko:K03709	-	ko00000,ko03000	Helix-turn-helix diphteria tox regulatory element
PNNFFKII_00306	2.77e-94	usp1	-	-	T	-	-	-	Universal stress protein family
PNNFFKII_00307	0.0	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
PNNFFKII_00308	4.91e-240	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PNNFFKII_00309	0.0	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PNNFFKII_00310	2.78e-310	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PNNFFKII_00311	2.16e-126	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PNNFFKII_00312	1.19e-231	-	-	-	D	ko:K06889	-	ko00000	Alpha beta
PNNFFKII_00313	3.29e-190	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
PNNFFKII_00314	1.36e-213	-	-	-	I	-	-	-	Alpha beta
PNNFFKII_00315	0.0	-	-	-	O	-	-	-	Pro-kumamolisin, activation domain
PNNFFKII_00316	6.12e-156	-	-	-	S	-	-	-	Membrane
PNNFFKII_00317	1.19e-173	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
PNNFFKII_00318	1.68e-50	-	-	-	-	-	-	-	-
PNNFFKII_00319	1.27e-147	nth2	-	-	L	ko:K07457	-	ko00000	Base excision DNA repair protein, HhH-GPD family
PNNFFKII_00320	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PNNFFKII_00321	2.05e-256	-	-	-	M	-	-	-	NlpC/P60 family
PNNFFKII_00322	5.55e-211	-	-	-	G	-	-	-	Peptidase_C39 like family
PNNFFKII_00323	4.83e-136	pncA	-	-	Q	-	-	-	Isochorismatase family
PNNFFKII_00324	1.03e-70	-	-	-	K	ko:K10947	-	ko00000,ko03000	Transcriptional regulator PadR-like family
PNNFFKII_00325	2.1e-117	-	-	-	S	-	-	-	Protein of unknown function (DUF1700)
PNNFFKII_00326	4.97e-206	-	-	-	S	-	-	-	Putative adhesin
PNNFFKII_00327	1.03e-238	dus	-	-	J	-	-	-	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PNNFFKII_00328	4.35e-93	fabV	1.3.1.44, 1.3.1.9	-	I	ko:K00209	ko00061,ko00650,ko01100,ko01120,ko01200,ko01212,map00061,map00650,map01100,map01120,map01200,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
PNNFFKII_00329	1.95e-164	fabV	1.3.1.44, 1.3.1.9	-	I	ko:K00209	ko00061,ko00650,ko01100,ko01120,ko01200,ko01212,map00061,map00650,map01100,map01120,map01200,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
PNNFFKII_00330	6.75e-96	-	-	-	C	-	-	-	Flavodoxin
PNNFFKII_00331	1.15e-125	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PNNFFKII_00332	1.12e-314	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
PNNFFKII_00333	6.88e-152	-	-	-	-	-	-	-	-
PNNFFKII_00334	4.04e-136	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
PNNFFKII_00335	0.0	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
PNNFFKII_00336	2.37e-289	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
PNNFFKII_00337	8.78e-238	adhP	1.1.1.1	-	C	ko:K00001,ko:K13953	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
PNNFFKII_00338	3.05e-90	-	-	-	K	ko:K03719	-	ko00000,ko03000,ko03036	AsnC family
PNNFFKII_00339	1.53e-245	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_00340	6.76e-217	proV	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PNNFFKII_00341	0.0	-	-	-	EM	ko:K05845,ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PNNFFKII_00342	7.55e-265	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
PNNFFKII_00343	1.33e-129	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
PNNFFKII_00344	4.76e-111	-	-	-	K	-	-	-	MarR family
PNNFFKII_00345	0.0	pacL1	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
PNNFFKII_00347	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PNNFFKII_00348	1.47e-197	-	-	-	-	-	-	-	-
PNNFFKII_00349	5.59e-139	maa	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose O-acetyltransferase
PNNFFKII_00350	1.7e-154	-	-	-	S	-	-	-	Elongation factor G-binding protein, N-terminal
PNNFFKII_00351	1.73e-168	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PNNFFKII_00352	1.4e-13	-	-	-	E	-	-	-	Protein of unknown function (DUF3923)
PNNFFKII_00353	1.11e-68	-	-	-	EG	-	-	-	EamA-like transporter family
PNNFFKII_00354	3.32e-120	-	-	-	EG	-	-	-	EamA-like transporter family
PNNFFKII_00355	0.0	copB	3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54	-	P	ko:K01533,ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
PNNFFKII_00356	7.02e-103	atkY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Copper transport repressor CopY TcrY
PNNFFKII_00357	4.25e-289	dacA2	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PNNFFKII_00358	2.84e-204	morA	-	-	S	-	-	-	reductase
PNNFFKII_00359	0.0	copA	3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54	-	P	ko:K01533,ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
PNNFFKII_00360	4.56e-87	-	-	-	S	-	-	-	Cupredoxin-like domain
PNNFFKII_00362	1.03e-202	icaB	-	-	G	-	-	-	Polysaccharide deacetylase
PNNFFKII_00363	1.41e-205	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
PNNFFKII_00364	2.74e-242	add	3.5.4.2, 3.5.4.4	-	F	ko:K01488,ko:K02029,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PNNFFKII_00365	0.0	oatA	-	-	I	-	-	-	Acyltransferase
PNNFFKII_00366	2.42e-160	-	-	-	-	-	-	-	-
PNNFFKII_00367	0.0	l1n	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
PNNFFKII_00368	3.35e-137	-	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PNNFFKII_00369	1.38e-89	cdd	3.5.4.5	-	F	ko:K01489	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
PNNFFKII_00370	8.9e-51	-	-	-	-	-	-	-	-
PNNFFKII_00371	4.44e-122	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PNNFFKII_00372	9.38e-317	xylP1	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
PNNFFKII_00373	1.16e-129	-	-	-	S	ko:K08996	-	ko00000	Protein of unknown function (DUF1440)
PNNFFKII_00374	0.0	uvrA2	-	-	L	-	-	-	ABC transporter
PNNFFKII_00375	5.02e-87	yodA	-	-	S	-	-	-	Tautomerase enzyme
PNNFFKII_00376	0.0	-	-	-	-	-	-	-	-
PNNFFKII_00377	7.3e-303	-	-	-	-	-	-	-	-
PNNFFKII_00378	3.23e-141	opuCD	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PNNFFKII_00379	1.49e-225	opuCC	-	-	M	ko:K05845	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PNNFFKII_00380	1.39e-136	opuCB	-	-	E	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PNNFFKII_00381	1.72e-286	opuCA	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PNNFFKII_00382	1.03e-58	-	-	-	-	-	-	-	-
PNNFFKII_00383	2.53e-283	-	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
PNNFFKII_00384	7.48e-234	ywbN	-	-	P	ko:K07223,ko:K16301	-	ko00000,ko01000,ko02000	Peroxidase
PNNFFKII_00385	8.22e-292	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
PNNFFKII_00386	1.98e-165	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
PNNFFKII_00387	0.0	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PNNFFKII_00388	2.37e-248	ykoT	-	-	M	-	-	-	Glycosyl transferase family 2
PNNFFKII_00389	0.0	-	-	-	M	ko:K07273	-	ko00000	hydrolase, family 25
PNNFFKII_00390	2.58e-139	-	-	-	-	-	-	-	-
PNNFFKII_00391	3.73e-264	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
PNNFFKII_00392	9.48e-286	yclI	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PNNFFKII_00393	1.45e-157	vex2	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
PNNFFKII_00394	0.0	malL	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
PNNFFKII_00395	6.56e-69	-	-	-	K	-	-	-	Winged helix-turn-helix DNA-binding
PNNFFKII_00396	3.96e-225	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_00397	1.5e-179	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
PNNFFKII_00398	9.85e-208	-	-	-	P	-	-	-	CorA-like Mg2+ transporter protein
PNNFFKII_00399	0.0	pox2	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
PNNFFKII_00400	3.7e-96	-	-	-	-	-	-	-	-
PNNFFKII_00401	3.02e-57	-	-	-	-	-	-	-	-
PNNFFKII_00402	2.93e-314	hpk2	-	-	T	-	-	-	Histidine kinase
PNNFFKII_00403	2.22e-168	rrp2	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
PNNFFKII_00404	1.47e-51	-	-	-	-	-	-	-	-
PNNFFKII_00405	2.61e-148	-	-	-	GM	-	-	-	NAD(P)H-binding
PNNFFKII_00406	4.61e-292	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
PNNFFKII_00407	2.62e-121	ogt	2.1.1.63	-	L	ko:K00567	-	ko00000,ko01000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PNNFFKII_00408	7.64e-131	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PNNFFKII_00409	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
PNNFFKII_00410	1.36e-128	-	-	-	K	-	-	-	Bacterial transcriptional regulator
PNNFFKII_00411	5.76e-65	-	-	-	G	-	-	-	Xylose isomerase domain protein TIM barrel
PNNFFKII_00412	3.4e-07	-	-	-	-	-	-	-	-
PNNFFKII_00413	1.6e-185	kduI	5.3.1.17	-	G	ko:K01815	ko00040,map00040	ko00000,ko00001,ko01000	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
PNNFFKII_00414	5.12e-177	kduD	1.1.1.127	-	IQ	ko:K00065	ko00040,map00040	ko00000,ko00001,ko01000	Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PNNFFKII_00415	7e-116	kdgT	-	-	P	ko:K02526	-	ko00000,ko02000	2-keto-3-deoxygluconate permease
PNNFFKII_00416	3.21e-139	kdgK	2.7.1.45	-	G	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	pfkB family carbohydrate kinase
PNNFFKII_00417	2.71e-103	eda	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	KDPG and KHG aldolase
PNNFFKII_00418	4.41e-167	-	1.1.1.53	-	IQ	ko:K00038	ko00140,ko01100,map00140,map01100	ko00000,ko00001,ko01000	reductase
PNNFFKII_00419	1.04e-305	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
PNNFFKII_00420	1.1e-198	degV	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
PNNFFKII_00421	0.0	nox	-	-	C	-	-	-	NADH oxidase
PNNFFKII_00422	6.89e-75	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
PNNFFKII_00423	2.72e-51	yrkD	-	-	S	-	-	-	Metal-sensitive transcriptional repressor
PNNFFKII_00424	3.13e-86	crcB1	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PNNFFKII_00425	2.22e-78	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PNNFFKII_00426	1.38e-191	-	-	-	-	-	-	-	-
PNNFFKII_00427	1.42e-210	-	-	-	I	-	-	-	Carboxylesterase family
PNNFFKII_00428	1.44e-113	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PNNFFKII_00429	2.67e-209	-	-	-	-	-	-	-	-
PNNFFKII_00430	0.0	pts14C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PNNFFKII_00431	1.08e-216	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
PNNFFKII_00432	4.53e-203	lysR5	-	-	K	-	-	-	LysR substrate binding domain
PNNFFKII_00433	6.5e-185	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
PNNFFKII_00434	2.07e-75	-	-	-	S	-	-	-	Protein of unknown function (DUF1634)
PNNFFKII_00435	7.15e-179	-	-	-	IQ	-	-	-	Oxidoreductase, short chain dehydrogenase reductase family protein
PNNFFKII_00436	1.56e-294	mdtG	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
PNNFFKII_00437	2.11e-68	ywaC	2.7.6.5	-	S	ko:K00951,ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
PNNFFKII_00438	2.36e-38	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
PNNFFKII_00439	2.46e-229	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PNNFFKII_00441	0.0	-	-	-	S	-	-	-	membrane
PNNFFKII_00442	1.44e-158	ciaR	-	-	K	ko:K14983	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	cheY-homologous receiver domain
PNNFFKII_00443	9.7e-309	ciaH	2.7.13.3	-	T	ko:K14982	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	His Kinase A (phosphoacceptor) domain
PNNFFKII_00444	6.61e-230	malR1	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator, LacI family
PNNFFKII_00445	0.0	malT	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
PNNFFKII_00446	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
PNNFFKII_00447	3.12e-100	-	-	-	-	-	-	-	-
PNNFFKII_00448	5.85e-56	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PNNFFKII_00449	7.91e-192	galM1	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
PNNFFKII_00450	3.07e-200	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
PNNFFKII_00451	1.1e-192	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PNNFFKII_00452	1.7e-84	-	-	-	K	-	-	-	MarR family
PNNFFKII_00453	3.34e-314	-	-	-	M	-	-	-	Parallel beta-helix repeats
PNNFFKII_00454	2.3e-96	-	-	-	P	-	-	-	ArsC family
PNNFFKII_00455	1.83e-184	lytE	-	-	M	-	-	-	NlpC/P60 family
PNNFFKII_00456	4.34e-201	-	-	-	K	-	-	-	acetyltransferase
PNNFFKII_00457	1.97e-23	-	-	-	E	-	-	-	dipeptidase activity
PNNFFKII_00458	0.0	-	-	-	E	-	-	-	dipeptidase activity
PNNFFKII_00459	3.64e-122	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
PNNFFKII_00460	3.04e-26	-	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
PNNFFKII_00461	3.25e-99	-	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
PNNFFKII_00462	3.63e-289	-	-	-	G	-	-	-	Major Facilitator
PNNFFKII_00463	0.0	-	3.2.1.37	GH43	G	ko:K01198	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
PNNFFKII_00464	6.15e-194	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PNNFFKII_00465	3.5e-171	fabG1	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PNNFFKII_00466	1.33e-195	-	-	-	GM	-	-	-	NmrA-like family
PNNFFKII_00467	3.78e-95	-	-	-	K	-	-	-	Transcriptional regulator
PNNFFKII_00468	3.13e-143	tagB	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	glycerophosphotransferase
PNNFFKII_00469	1.58e-249	tagB	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	glycerophosphotransferase
PNNFFKII_00470	1.11e-211	-	-	-	-	-	-	-	-
PNNFFKII_00471	5.61e-82	ytcD	-	-	K	-	-	-	Transcriptional regulator, HxlR family
PNNFFKII_00472	1.52e-264	ytbD	-	-	EGP	ko:K19577	-	ko00000,ko02000	Major Facilitator
PNNFFKII_00473	3.04e-233	ydhF	-	-	S	-	-	-	Aldo keto reductase
PNNFFKII_00474	1.14e-175	cysA	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PNNFFKII_00475	0.0	-	-	-	Q	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
PNNFFKII_00476	5.55e-79	-	-	-	K	-	-	-	Transcriptional regulator, GntR family
PNNFFKII_00477	3.22e-90	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
PNNFFKII_00478	3.87e-263	-	-	-	M	-	-	-	Collagen binding domain
PNNFFKII_00479	0.0	cadA	-	-	P	-	-	-	P-type ATPase
PNNFFKII_00480	6.34e-156	-	-	-	S	-	-	-	SNARE associated Golgi protein
PNNFFKII_00481	0.0	sufI	-	-	Q	-	-	-	Multicopper oxidase
PNNFFKII_00482	1.43e-69	czrA	-	-	K	ko:K22043	-	ko00000,ko03000	Transcriptional regulator, ArsR family
PNNFFKII_00483	3.78e-133	cadD	-	-	P	-	-	-	Cadmium resistance transporter
PNNFFKII_00484	6.02e-212	-	-	-	S	-	-	-	Conserved hypothetical protein 698
PNNFFKII_00485	2.58e-198	-	-	-	K	-	-	-	LysR substrate binding domain
PNNFFKII_00486	1.31e-267	blt	-	-	EGP	ko:K08153	-	ko00000,ko00002,ko02000	transporter
PNNFFKII_00487	4.19e-204	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PNNFFKII_00488	0.0	ykpA	-	-	S	-	-	-	ABC transporter, ATP-binding protein
PNNFFKII_00489	4.37e-213	oroP	-	-	S	ko:K09936	ko02024,map02024	ko00000,ko00001,ko02000	Putative inner membrane exporter, YdcZ
PNNFFKII_00490	3.04e-231	iunH5	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	inosine-uridine preferring nucleoside hydrolase
PNNFFKII_00491	7.27e-42	-	-	-	-	-	-	-	-
PNNFFKII_00492	0.0	-	2.8.2.22	-	M	ko:K01023	-	ko00000,ko01000	Arylsulfotransferase Ig-like domain
PNNFFKII_00493	3.69e-169	-	-	-	S	-	-	-	B3/4 domain
PNNFFKII_00494	3.64e-161	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
PNNFFKII_00495	2.63e-82	ytrA	-	-	K	ko:K07979	-	ko00000,ko03000	helix_turn_helix gluconate operon transcriptional repressor
PNNFFKII_00496	6.18e-207	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PNNFFKII_00497	1.23e-225	-	-	-	-	ko:K16919	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	-
PNNFFKII_00498	5.8e-248	-	-	-	KT	ko:K02647	-	ko00000,ko03000	Putative sugar diacid recognition
PNNFFKII_00499	2.84e-272	yojA	-	-	EG	ko:K03299	-	ko00000,ko02000	GntP family permease
PNNFFKII_00500	4.38e-266	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
PNNFFKII_00501	0.0	ydbT	-	-	S	ko:K08981	-	ko00000	Bacterial PH domain
PNNFFKII_00502	1.33e-110	ydbS	-	-	S	ko:K09167	-	ko00000	Bacterial PH domain
PNNFFKII_00503	1.73e-102	-	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside 2-deoxyribosyltransferase
PNNFFKII_00504	0.0	-	-	-	U	ko:K03457	-	ko00000	Belongs to the purine-cytosine permease (2.A.39) family
PNNFFKII_00505	2.65e-48	-	-	-	-	-	-	-	-
PNNFFKII_00506	0.0	-	-	-	K	-	-	-	Mga helix-turn-helix domain
PNNFFKII_00507	0.0	-	-	-	S	ko:K13730	ko05100,map05100	ko00000,ko00001	Uncharacterized protein conserved in bacteria (DUF2252)
PNNFFKII_00508	1.35e-20	-	-	-	K	-	-	-	Winged helix DNA-binding domain
PNNFFKII_00509	2.09e-41	-	-	-	-	-	-	-	-
PNNFFKII_00510	5.87e-306	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
PNNFFKII_00511	3.22e-307	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PNNFFKII_00513	4.9e-126	-	-	-	I	-	-	-	NUDIX domain
PNNFFKII_00514	1.98e-147	yviA	-	-	S	-	-	-	Protein of unknown function (DUF421)
PNNFFKII_00515	2.17e-97	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
PNNFFKII_00516	5.79e-215	ropB	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PNNFFKII_00517	5.69e-281	-	-	-	EGP	-	-	-	Transmembrane secretion effector
PNNFFKII_00518	0.0	gshR	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Glutathione reductase
PNNFFKII_00519	2.98e-49	ygbF	-	-	S	-	-	-	Sugar efflux transporter for intercellular exchange
PNNFFKII_00521	1.5e-260	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PNNFFKII_00522	5.37e-48	-	-	-	-	-	-	-	-
PNNFFKII_00523	2.31e-178	-	-	-	G	-	-	-	Xylose isomerase domain protein TIM barrel
PNNFFKII_00524	1.77e-291	gntT	-	-	EG	-	-	-	Citrate transporter
PNNFFKII_00525	1.18e-227	kdgK	2.7.1.45	-	G	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	pfkB family carbohydrate kinase
PNNFFKII_00526	6.37e-137	-	4.1.2.43	-	G	ko:K08093	ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Orotidine 5'-phosphate decarboxylase HUMPS family
PNNFFKII_00527	4.77e-112	hxlB	5.3.1.27	-	M	ko:K08094	ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	sugar phosphate isomerase involved in capsule formation
PNNFFKII_00528	4.26e-225	kdgR	-	-	K	ko:K02525	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PNNFFKII_00529	3.57e-72	-	-	-	-	-	-	-	-
PNNFFKII_00530	6.94e-110	-	-	-	-	-	-	-	-
PNNFFKII_00531	0.0	-	-	-	L	-	-	-	DNA helicase
PNNFFKII_00533	1.16e-243	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
PNNFFKII_00534	5.35e-217	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
PNNFFKII_00535	6.78e-289	mvaA	1.1.1.88, 2.3.1.9	-	C	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the HMG-CoA reductase family
PNNFFKII_00536	8.05e-231	-	-	-	-	-	-	-	-
PNNFFKII_00537	8.39e-168	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
PNNFFKII_00538	8.41e-67	-	-	-	-	-	-	-	-
PNNFFKII_00539	2.54e-207	yunF	-	-	F	-	-	-	Protein of unknown function DUF72
PNNFFKII_00540	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PNNFFKII_00541	1.63e-187	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
PNNFFKII_00542	9.98e-128	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PNNFFKII_00543	4.9e-208	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PNNFFKII_00544	1.14e-48	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
PNNFFKII_00545	3.2e-207	ispE	2.7.1.148	-	F	ko:K00919,ko:K16924	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PNNFFKII_00546	4.6e-143	ung2	-	-	L	-	-	-	Uracil-DNA glycosylase
PNNFFKII_00547	0.0	yicI	3.2.1.177	GH31	G	ko:K01811	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 31 family
PNNFFKII_00548	0.0	xylP	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
PNNFFKII_00549	1.32e-271	xylR	-	-	GK	-	-	-	ROK family
PNNFFKII_00550	0.0	bglA	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PNNFFKII_00551	7.59e-214	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
PNNFFKII_00552	1.48e-118	-	-	-	-	-	-	-	-
PNNFFKII_00554	3.36e-207	-	-	-	S	ko:K06889	-	ko00000	Prolyl oligopeptidase family
PNNFFKII_00555	1.66e-215	psaA	-	-	P	ko:K02077,ko:K11707	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
PNNFFKII_00556	2.93e-168	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
PNNFFKII_00557	2.09e-173	znuB	-	-	U	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
PNNFFKII_00560	1.02e-185	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
PNNFFKII_00561	7.66e-308	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PNNFFKII_00562	2.8e-229	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PNNFFKII_00563	9e-74	-	-	-	S	-	-	-	Domain of unknown function (DUF3899)
PNNFFKII_00564	1.15e-94	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PNNFFKII_00565	3.81e-169	gntR	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
PNNFFKII_00566	0.0	xpkA	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
PNNFFKII_00567	1.89e-188	yxeH	-	-	S	-	-	-	hydrolase
PNNFFKII_00568	0.0	ywfO	-	-	S	ko:K06885	-	ko00000	HD domain protein
PNNFFKII_00569	2.61e-199	lipL	2.3.1.200, 2.3.1.204	-	H	ko:K16869,ko:K18821	-	ko00000,ko01000	biotin lipoate A B protein ligase
PNNFFKII_00570	1.22e-102	ywiB	-	-	S	-	-	-	Domain of unknown function (DUF1934)
PNNFFKII_00571	3.8e-78	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PNNFFKII_00572	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PNNFFKII_00573	0.0	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
PNNFFKII_00574	0.0	-	-	-	-	-	-	-	-
PNNFFKII_00575	3.99e-96	-	-	-	K	-	-	-	Transcriptional regulator
PNNFFKII_00576	0.0	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
PNNFFKII_00577	1.44e-166	budA	4.1.1.5	-	H	ko:K01575	ko00650,ko00660,map00650,map00660	ko00000,ko00001,ko01000	Belongs to the alpha-acetolactate decarboxylase family
PNNFFKII_00578	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
PNNFFKII_00579	1.21e-302	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PNNFFKII_00580	3.24e-57	rpmE2	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
PNNFFKII_00581	8.23e-157	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
PNNFFKII_00585	2.52e-97	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
PNNFFKII_00586	3.96e-225	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_00589	3.13e-46	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
PNNFFKII_00590	2.36e-57	-	-	-	S	-	-	-	Cell surface protein
PNNFFKII_00591	1.26e-242	-	-	-	L	ko:K07482	-	ko00000	Helix-turn-helix domain
PNNFFKII_00592	6.49e-55	-	-	-	S	-	-	-	Cell surface protein
PNNFFKII_00593	6.23e-127	XK27_00720	-	-	S	ko:K13730	ko05100,map05100	ko00000,ko00001	regulation of response to stimulus
PNNFFKII_00594	2.62e-89	-	-	-	L	ko:K07483,ko:K07497	-	ko00000	Helix-turn-helix domain
PNNFFKII_00595	1.68e-140	-	-	-	L	ko:K07497	-	ko00000	PFAM Integrase catalytic region
PNNFFKII_00596	8.44e-315	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
PNNFFKII_00597	4.67e-114	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PNNFFKII_00598	2.17e-127	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
PNNFFKII_00599	6.57e-198	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
PNNFFKII_00600	1.91e-192	-	-	-	-	-	-	-	-
PNNFFKII_00601	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PNNFFKII_00602	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PNNFFKII_00603	2.03e-272	-	-	-	S	-	-	-	nuclear-transcribed mRNA catabolic process, no-go decay
PNNFFKII_00604	9.61e-84	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PNNFFKII_00605	1.01e-273	alr	5.1.1.1	-	E	ko:K01775	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PNNFFKII_00607	1.45e-80	ndoA	-	-	L	ko:K07171	-	ko00000,ko01000,ko02048	Toxic component of a toxin-antitoxin (TA) module
PNNFFKII_00608	7.47e-148	-	-	-	S	-	-	-	(CBS) domain
PNNFFKII_00610	0.0	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
PNNFFKII_00611	5.62e-225	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
PNNFFKII_00612	1.28e-132	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PNNFFKII_00613	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PNNFFKII_00614	0.0	yabM	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
PNNFFKII_00615	7.09e-53	yabO	-	-	J	-	-	-	S4 domain protein
PNNFFKII_00616	9.05e-58	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
PNNFFKII_00617	4.64e-124	yabR	-	-	J	ko:K07571	-	ko00000	RNA binding
PNNFFKII_00618	0.0	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PNNFFKII_00619	5.23e-125	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
PNNFFKII_00620	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PNNFFKII_00621	2.74e-209	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PNNFFKII_00622	2.56e-248	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PNNFFKII_00627	3.2e-70	-	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
PNNFFKII_00628	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
PNNFFKII_00629	1.64e-196	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
PNNFFKII_00632	1.08e-176	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PNNFFKII_00633	2.69e-277	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
PNNFFKII_00634	1.28e-161	yvoA_2	-	-	K	ko:K03710	-	ko00000,ko03000	UbiC transcription regulator-associated domain protein
PNNFFKII_00635	6.01e-39	yfbM	-	-	K	-	-	-	FR47-like protein
PNNFFKII_00636	1.34e-180	tagA	2.4.1.187	GT26	F	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PNNFFKII_00637	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PNNFFKII_00638	9.45e-196	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PNNFFKII_00639	3.12e-95	-	-	-	-	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	-
PNNFFKII_00640	0.0	tex	-	-	K	ko:K06959	-	ko00000	Tex-like protein N-terminal domain protein
PNNFFKII_00641	1.75e-115	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
PNNFFKII_00642	6.91e-202	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PNNFFKII_00644	2.92e-193	-	4.1.1.52	-	S	ko:K22213	-	ko00000,ko01000	Amidohydrolase
PNNFFKII_00645	1.27e-158	-	-	-	S	-	-	-	Alpha/beta hydrolase family
PNNFFKII_00646	4.99e-81	-	-	-	K	-	-	-	transcriptional regulator
PNNFFKII_00647	9.17e-131	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
PNNFFKII_00648	6.05e-98	-	-	-	K	-	-	-	MarR family
PNNFFKII_00649	4.44e-309	dinF	-	-	V	-	-	-	MatE
PNNFFKII_00650	1.99e-138	-	-	-	S	-	-	-	HAD hydrolase, family IA, variant
PNNFFKII_00651	5.33e-71	levD	2.7.1.191, 2.7.1.202	-	G	ko:K02793,ko:K02794,ko:K11194	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
PNNFFKII_00652	8.55e-79	manX	2.7.1.191, 2.7.1.202	-	G	ko:K02769,ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko01120,ko02060,map00051,map00520,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
PNNFFKII_00653	1.13e-175	manM	-	-	G	ko:K02746,ko:K02795	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system
PNNFFKII_00654	6.42e-198	manN	-	-	G	ko:K02796,ko:K02815	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	system, mannose fructose sorbose family IID component
PNNFFKII_00655	1.66e-227	ydbI	-	-	K	-	-	-	AI-2E family transporter
PNNFFKII_00656	3.05e-214	-	-	-	T	-	-	-	diguanylate cyclase
PNNFFKII_00657	2.71e-151	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
PNNFFKII_00658	2.02e-131	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PNNFFKII_00659	0.0	XK27_06930	-	-	V	ko:K01421	-	ko00000	domain protein
PNNFFKII_00660	2.09e-213	psaA	-	-	P	ko:K02077,ko:K11707	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
PNNFFKII_00661	2.72e-261	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
PNNFFKII_00662	5.71e-212	mleP2	-	-	S	ko:K07088	-	ko00000	Transporter, auxin efflux carrier (AEC) family protein
PNNFFKII_00663	2.2e-230	-	-	-	EG	-	-	-	EamA-like transporter family
PNNFFKII_00664	8.39e-159	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PNNFFKII_00665	4.81e-293	-	-	-	V	-	-	-	Beta-lactamase
PNNFFKII_00666	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
PNNFFKII_00668	1.63e-163	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PNNFFKII_00669	1.42e-74	-	-	-	-	-	-	-	-
PNNFFKII_00670	2.6e-129	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
PNNFFKII_00671	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PNNFFKII_00672	2.11e-272	yacL	-	-	S	-	-	-	domain protein
PNNFFKII_00673	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PNNFFKII_00674	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
PNNFFKII_00675	7.28e-92	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PNNFFKII_00676	5.21e-178	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PNNFFKII_00677	1.04e-116	yacP	-	-	S	ko:K06962	-	ko00000	YacP-like NYN domain
PNNFFKII_00678	7.92e-129	sigH	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	Sigma-70 region 2
PNNFFKII_00679	2.55e-28	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
PNNFFKII_00680	1.27e-34	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PNNFFKII_00681	1.61e-127	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
PNNFFKII_00682	4.14e-94	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PNNFFKII_00683	1.75e-160	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PNNFFKII_00684	1.3e-110	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PNNFFKII_00685	7.9e-74	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PNNFFKII_00686	0.0	mprF	2.3.2.3	-	S	ko:K14205	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PNNFFKII_00687	7.64e-142	yvdD	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the LOG family
PNNFFKII_00688	2.76e-218	-	1.1.1.157	-	I	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	ko00000,ko00001,ko01000	3-hydroxyacyl-CoA dehydrogenase
PNNFFKII_00689	4.42e-249	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PNNFFKII_00690	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PNNFFKII_00691	9.51e-51	nrdH	-	-	O	ko:K06191	-	ko00000	Glutaredoxin
PNNFFKII_00692	1.36e-145	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
PNNFFKII_00693	2.2e-123	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PNNFFKII_00694	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PNNFFKII_00695	6.48e-56	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PNNFFKII_00696	2.17e-140	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PNNFFKII_00697	2.48e-52	yaaL	-	-	S	-	-	-	Protein of unknown function (DUF2508)
PNNFFKII_00698	2.72e-145	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PNNFFKII_00699	1.44e-72	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
PNNFFKII_00700	9.74e-231	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
PNNFFKII_00701	3.21e-62	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
PNNFFKII_00702	4.05e-210	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PNNFFKII_00703	9.84e-183	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
PNNFFKII_00704	1.01e-163	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
PNNFFKII_00705	4.04e-142	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
PNNFFKII_00706	1.74e-250	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PNNFFKII_00707	9.36e-275	yycB	-	-	P	ko:K03449	-	ko00000,ko02000	Transporter, major facilitator family protein
PNNFFKII_00708	8.86e-62	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
PNNFFKII_00709	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
PNNFFKII_00710	5.69e-147	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PNNFFKII_00711	1.56e-60	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PNNFFKII_00712	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PNNFFKII_00713	0.0	ydaO	-	-	E	-	-	-	amino acid
PNNFFKII_00714	5.17e-180	lrgB	-	-	M	ko:K05339	ko02020,map02020	ko00000,ko00001	LrgB-like family
PNNFFKII_00715	1.17e-91	lrgA	-	-	S	ko:K05338	ko02020,map02020	ko00000,ko00001,ko02000	LrgA family
PNNFFKII_00716	6.19e-243	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	transferase
PNNFFKII_00717	1.75e-149	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
PNNFFKII_00718	0.0	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
PNNFFKII_00719	8.73e-164	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
PNNFFKII_00720	3.5e-126	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PNNFFKII_00721	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PNNFFKII_00722	3.79e-235	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PNNFFKII_00723	1.98e-281	minJ	-	-	O	-	-	-	Domain present in PSD-95, Dlg, and ZO-1/2.
PNNFFKII_00724	1.44e-165	phoP	-	-	K	ko:K07658	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
PNNFFKII_00725	0.0	phoR	2.7.13.3	-	T	ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PNNFFKII_00726	2.62e-206	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
PNNFFKII_00727	5.41e-202	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
PNNFFKII_00728	1.68e-198	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
PNNFFKII_00729	5.46e-194	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PNNFFKII_00730	6.12e-180	pstB1	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PNNFFKII_00731	1.68e-155	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
PNNFFKII_00732	5.88e-72	-	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain protein
PNNFFKII_00733	7.21e-50	yvlD	-	-	S	ko:K08972	-	ko00000	Mycobacterial 4 TMS phage holin, superfamily IV
PNNFFKII_00734	4.08e-219	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PNNFFKII_00735	2.41e-199	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PNNFFKII_00736	2.14e-234	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
PNNFFKII_00737	1.73e-215	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
PNNFFKII_00738	3.26e-226	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PNNFFKII_00740	1.29e-148	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
PNNFFKII_00741	1.06e-121	-	-	-	K	-	-	-	acetyltransferase
PNNFFKII_00742	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PNNFFKII_00743	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PNNFFKII_00744	4.79e-117	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
PNNFFKII_00745	5.33e-211	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
PNNFFKII_00746	3.47e-244	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
PNNFFKII_00747	4.23e-217	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
PNNFFKII_00748	2.08e-133	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PNNFFKII_00749	3.75e-98	-	-	-	K	-	-	-	LytTr DNA-binding domain
PNNFFKII_00750	1.88e-162	-	-	-	S	-	-	-	membrane
PNNFFKII_00752	4.02e-138	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
PNNFFKII_00754	6.94e-238	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	Putative sugar-binding domain
PNNFFKII_00755	2.45e-244	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PNNFFKII_00756	7.88e-287	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
PNNFFKII_00757	5.46e-179	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PNNFFKII_00758	2.84e-316	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PNNFFKII_00760	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
PNNFFKII_00761	1.06e-44	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
PNNFFKII_00762	3.69e-181	est	3.1.1.1	-	S	ko:K03928	-	ko00000,ko01000	Serine aminopeptidase, S33
PNNFFKII_00763	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PNNFFKII_00764	4.3e-106	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PNNFFKII_00765	1.18e-169	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PNNFFKII_00766	2.56e-134	-	-	-	-	-	-	-	-
PNNFFKII_00767	2.24e-180	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PNNFFKII_00768	4.83e-229	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
PNNFFKII_00769	7.73e-109	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
PNNFFKII_00770	1.91e-114	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PNNFFKII_00771	8.93e-249	tas3	-	-	C	ko:K19265	-	ko00000,ko01000	Aldo keto reductase family protein
PNNFFKII_00772	6.15e-132	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
PNNFFKII_00773	4.71e-194	exoA	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
PNNFFKII_00774	9.51e-210	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
PNNFFKII_00775	0.0	yvgP	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
PNNFFKII_00776	1.34e-158	-	-	-	S	-	-	-	Protein of unknown function (DUF1361)
PNNFFKII_00777	5.67e-196	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PNNFFKII_00778	1.32e-193	ybbR	-	-	S	-	-	-	YbbR-like protein
PNNFFKII_00779	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PNNFFKII_00780	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PNNFFKII_00781	3.46e-18	-	-	-	-	-	-	-	-
PNNFFKII_00782	1.05e-165	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PNNFFKII_00783	0.0	-	-	CBM50	NU	ko:K02395,ko:K19223	-	ko00000,ko01000,ko01002,ko01011,ko02035	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PNNFFKII_00784	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	P-type ATPase
PNNFFKII_00785	1.88e-122	dpsB	-	-	P	-	-	-	Belongs to the Dps family
PNNFFKII_00786	2.98e-45	copZ	-	-	P	-	-	-	Heavy-metal-associated domain
PNNFFKII_00787	1.56e-255	tagH	3.6.3.40	-	GM	ko:K09693	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
PNNFFKII_00788	3.81e-67	-	-	-	-	-	-	-	-
PNNFFKII_00789	1.2e-130	-	-	-	S	-	-	-	Iron Transport-associated domain
PNNFFKII_00790	4.27e-257	-	-	-	M	-	-	-	Iron Transport-associated domain
PNNFFKII_00791	9.62e-154	-	-	-	M	ko:K14193	ko05150,map05150	ko00000,ko00001	Iron Transport-associated domain
PNNFFKII_00792	1.12e-209	isdE	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
PNNFFKII_00793	8.57e-222	isdF	-	-	U	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PNNFFKII_00794	3.16e-182	fepC	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PNNFFKII_00795	8.23e-219	ppx	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
PNNFFKII_00796	0.0	ppk	2.7.4.1	-	P	ko:K00937	ko00190,ko03018,map00190,map03018	ko00000,ko00001,ko01000,ko03019	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PNNFFKII_00797	0.0	ppx3	3.6.1.11, 3.6.1.40	-	FP	ko:K01524	ko00230,map00230	ko00000,ko00001,ko01000	exopolyphosphatase
PNNFFKII_00798	1.51e-195	-	-	-	M	ko:K07271	-	ko00000,ko01000	LicD family
PNNFFKII_00799	1.91e-116	-	-	-	S	-	-	-	Domain of unknown function (DUF5067)
PNNFFKII_00800	8.55e-99	-	-	-	K	-	-	-	Transcriptional regulator
PNNFFKII_00801	2.39e-34	-	-	-	-	-	-	-	-
PNNFFKII_00802	3.21e-104	-	-	-	O	-	-	-	OsmC-like protein
PNNFFKII_00803	2.26e-33	-	-	-	-	-	-	-	-
PNNFFKII_00805	1.47e-74	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
PNNFFKII_00806	7.33e-115	-	-	-	-	-	-	-	-
PNNFFKII_00807	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PNNFFKII_00808	0.0	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Peptidase dimerisation domain
PNNFFKII_00809	5.33e-119	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PNNFFKII_00810	3.14e-130	-	-	-	S	-	-	-	Putative glutamine amidotransferase
PNNFFKII_00811	6.1e-173	-	-	-	S	ko:K09936	ko02024,map02024	ko00000,ko00001,ko02000	protein conserved in bacteria
PNNFFKII_00812	3.52e-189	-	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolases, choloylglycine hydrolase family
PNNFFKII_00813	1.15e-300	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
PNNFFKII_00814	5.43e-57	-	-	-	-	-	-	-	-
PNNFFKII_00817	1.15e-189	yclJ	-	-	K	ko:K02483	-	ko00000,ko02022	response regulator
PNNFFKII_00818	0.0	yclK	-	-	T	-	-	-	Histidine kinase
PNNFFKII_00819	1.6e-270	ywbD	2.1.1.191	-	J	ko:K06969	-	ko00000,ko01000,ko03009	S-adenosylmethionine-dependent methyltransferase
PNNFFKII_00820	2.6e-199	glcU	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
PNNFFKII_00821	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
PNNFFKII_00822	0.0	yfhO	-	-	S	-	-	-	Bacterial membrane protein YfhO
PNNFFKII_00823	1.55e-105	tspO	-	-	T	ko:K05770	ko04080,ko04214,ko04979,ko05166,map04080,map04214,map04979,map05166	ko00000,ko00001,ko02000	TspO/MBR family
PNNFFKII_00824	2.28e-127	-	-	-	S	-	-	-	Protein of unknown function (DUF1211)
PNNFFKII_00825	1.49e-97	-	-	-	L	-	-	-	Transposase DDE domain
PNNFFKII_00826	5.54e-88	-	-	-	L	-	-	-	Putative transposase of IS4/5 family (DUF4096)
PNNFFKII_00829	2.65e-220	-	-	-	S	-	-	-	NAD:arginine ADP-ribosyltransferase
PNNFFKII_00830	1.96e-252	ysdE	-	-	P	-	-	-	Citrate transporter
PNNFFKII_00831	1.1e-157	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
PNNFFKII_00832	1.16e-191	-	-	-	T	-	-	-	diguanylate cyclase
PNNFFKII_00833	3.9e-29	-	-	-	-	-	-	-	-
PNNFFKII_00834	2.69e-226	-	-	-	L	ko:K07482	-	ko00000	Integrase core domain
PNNFFKII_00835	1.82e-241	-	-	-	L	-	-	-	Transposase
PNNFFKII_00836	8.58e-220	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_00837	5.22e-75	-	-	-	-	-	-	-	-
PNNFFKII_00838	0.0	ycfI	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter, ATP-binding protein
PNNFFKII_00839	0.0	yfiC	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
PNNFFKII_00840	4.26e-251	ampC	-	-	V	-	-	-	Beta-lactamase
PNNFFKII_00841	9.09e-173	cobQ	-	-	S	ko:K07009	-	ko00000	glutamine amidotransferase
PNNFFKII_00842	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Mur ligase, middle domain
PNNFFKII_00843	7.63e-143	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
PNNFFKII_00844	2.77e-249	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PNNFFKII_00845	4.34e-200	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PNNFFKII_00846	4.74e-243	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PNNFFKII_00847	4.47e-295	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PNNFFKII_00848	1.3e-146	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PNNFFKII_00849	1.55e-162	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
PNNFFKII_00850	7.38e-37	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PNNFFKII_00851	3.81e-77	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PNNFFKII_00852	4.44e-117	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PNNFFKII_00853	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PNNFFKII_00854	1.07e-208	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PNNFFKII_00855	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PNNFFKII_00856	4.49e-88	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
PNNFFKII_00857	1.11e-45	ywzB	-	-	S	-	-	-	Protein of unknown function (DUF1146)
PNNFFKII_00858	1.18e-308	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PNNFFKII_00859	4.82e-230	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
PNNFFKII_00860	1.11e-69	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
PNNFFKII_00861	9.66e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
PNNFFKII_00862	4.52e-282	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
PNNFFKII_00863	2.71e-66	gcsH2	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	glycine cleavage
PNNFFKII_00864	3.22e-185	-	-	-	O	-	-	-	Band 7 protein
PNNFFKII_00865	3.15e-229	-	-	-	S	-	-	-	Protein of unknown function (DUF2785)
PNNFFKII_00866	1.33e-277	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
PNNFFKII_00867	0.0	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Glycerophosphoryl diester phosphodiesterase family
PNNFFKII_00868	5.48e-204	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PNNFFKII_00869	2.12e-107	uspA	-	-	T	-	-	-	universal stress protein
PNNFFKII_00870	3.68e-55	-	-	-	-	-	-	-	-
PNNFFKII_00871	4.23e-306	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
PNNFFKII_00872	1.3e-104	XK27_05190	-	-	S	-	-	-	Protein of unknown function (DUF1694)
PNNFFKII_00873	6.01e-147	yktB	-	-	S	-	-	-	Belongs to the UPF0637 family
PNNFFKII_00874	6.78e-81	-	-	-	KLT	-	-	-	serine threonine protein kinase
PNNFFKII_00875	5.1e-140	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PNNFFKII_00876	7.76e-108	yebR	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
PNNFFKII_00877	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PNNFFKII_00878	1.61e-274	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
PNNFFKII_00879	1.27e-290	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PNNFFKII_00880	5.75e-119	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PNNFFKII_00881	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PNNFFKII_00882	0.0	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
PNNFFKII_00883	9.77e-152	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
PNNFFKII_00884	1.71e-218	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
PNNFFKII_00885	1.53e-184	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
PNNFFKII_00886	3.85e-120	mreD	-	-	M	ko:K03571	-	ko00000,ko03036	rod shape-determining protein MreD
PNNFFKII_00887	2.04e-150	minC	-	-	D	ko:K03610	-	ko00000,ko03036,ko04812	Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
PNNFFKII_00888	1.57e-190	minD	-	-	D	ko:K03609	-	ko00000,ko03036,ko04812	Belongs to the ParA family
PNNFFKII_00889	6.6e-142	-	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter permease
PNNFFKII_00890	8.68e-121	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PNNFFKII_00891	1.85e-204	aatB	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
PNNFFKII_00892	7.24e-301	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
PNNFFKII_00893	1.97e-313	ymfH	-	-	S	-	-	-	Peptidase M16
PNNFFKII_00894	1.28e-148	ymfM	-	-	S	ko:K15539	-	ko00000	Domain of unknown function (DUF4115)
PNNFFKII_00895	5.53e-132	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PNNFFKII_00896	7.36e-291	cinA	3.5.1.42	-	S	ko:K03742,ko:K03743	ko00760,map00760	ko00000,ko00001,ko01000	Belongs to the CinA family
PNNFFKII_00897	3.34e-249	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PNNFFKII_00898	2.13e-295	-	-	-	L	-	-	-	Transposase
PNNFFKII_00900	6.75e-314	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
PNNFFKII_00901	9.84e-192	ymdB	-	-	S	ko:K02029,ko:K02030,ko:K09769	-	ko00000,ko00002,ko02000	YmdB-like protein
PNNFFKII_00902	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PNNFFKII_00903	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PNNFFKII_00904	1.11e-139	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PNNFFKII_00905	3.2e-241	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PNNFFKII_00906	9.73e-255	queA	2.4.99.17	-	J	ko:K07568	-	ko00000,ko01000,ko03016	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PNNFFKII_00907	6.46e-290	tgt	2.4.2.29	-	F	ko:K00773	-	ko00000,ko01000,ko03016	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PNNFFKII_00908	6.65e-52	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
PNNFFKII_00909	7.82e-231	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PNNFFKII_00910	1.83e-230	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
PNNFFKII_00911	0.0	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PNNFFKII_00912	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PNNFFKII_00913	1.94e-59	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
PNNFFKII_00914	7.07e-97	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PNNFFKII_00915	2.47e-68	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
PNNFFKII_00916	1.62e-53	-	-	-	D	ko:K09888	-	ko00000,ko03036	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PNNFFKII_00917	2.58e-115	cvpA	-	-	S	-	-	-	Colicin V production protein
PNNFFKII_00918	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PNNFFKII_00919	6.22e-72	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
PNNFFKII_00920	1.77e-120	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
PNNFFKII_00921	3.54e-191	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
PNNFFKII_00922	2.53e-139	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PNNFFKII_00923	3.07e-129	ysnB	-	-	S	ko:K07095	-	ko00000	Phosphoesterase
PNNFFKII_00924	2.88e-111	ykuL	-	-	S	-	-	-	(CBS) domain
PNNFFKII_00926	1.12e-64	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
PNNFFKII_00927	7.41e-305	-	-	-	U	-	-	-	Major Facilitator Superfamily
PNNFFKII_00928	2.7e-199	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
PNNFFKII_00929	3.9e-82	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PNNFFKII_00930	1.38e-73	-	-	-	-	-	-	-	-
PNNFFKII_00931	2.45e-270	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
PNNFFKII_00932	1.23e-231	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
PNNFFKII_00933	3.3e-175	-	-	-	-	-	-	-	-
PNNFFKII_00934	3.4e-174	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PNNFFKII_00935	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
PNNFFKII_00936	1.68e-169	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
PNNFFKII_00937	1.87e-220	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
PNNFFKII_00938	2.6e-218	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
PNNFFKII_00939	1.61e-64	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	competence protein ComGC
PNNFFKII_00940	1.16e-106	-	-	-	-	-	-	-	-
PNNFFKII_00942	7.17e-99	-	-	-	-	ko:K02248	-	ko00000,ko00002,ko02044	-
PNNFFKII_00943	1.7e-237	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
PNNFFKII_00944	2.16e-282	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PNNFFKII_00945	0.0	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
PNNFFKII_00946	1.15e-199	yeaE	-	-	S	-	-	-	Aldo keto
PNNFFKII_00947	6.48e-148	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
PNNFFKII_00948	0.0	yunD	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PNNFFKII_00949	6.59e-139	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
PNNFFKII_00950	6.64e-190	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PNNFFKII_00951	4.37e-154	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
PNNFFKII_00952	3.37e-119	-	-	-	S	-	-	-	WxL domain surface cell wall-binding
PNNFFKII_00953	0.0	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
PNNFFKII_00954	0.0	-	-	-	M	-	-	-	domain protein
PNNFFKII_00955	0.0	-	-	-	E	ko:K03294	-	ko00000	Amino Acid
PNNFFKII_00956	1.75e-185	dhrS4	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Oxidoreductase, short chain dehydrogenase reductase family protein
PNNFFKII_00957	7.19e-27	ytbE	-	-	S	-	-	-	reductase
PNNFFKII_00958	1.19e-157	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
PNNFFKII_00959	2.63e-115	pgpA	3.1.3.27	-	I	ko:K01095	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Phosphatidylglycerophosphatase A
PNNFFKII_00960	4.07e-144	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PNNFFKII_00961	4.82e-94	yugI	-	-	J	ko:K07570,ko:K07571	-	ko00000	general stress protein
PNNFFKII_00980	5.03e-299	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
PNNFFKII_00981	3.62e-121	traP	1.14.99.57	-	S	ko:K21481	-	ko00000,ko01000	enzyme involved in biosynthesis of extracellular polysaccharides
PNNFFKII_00982	5.25e-178	yhfI	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
PNNFFKII_00983	3.6e-92	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PNNFFKII_00984	2.2e-165	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PNNFFKII_00985	3.63e-130	-	-	-	T	-	-	-	EAL domain
PNNFFKII_00986	1.58e-116	-	-	-	-	-	-	-	-
PNNFFKII_00987	2.9e-81	yijG	-	GT2	M	ko:K11936	ko02026,map02026	ko00000,ko00001,ko01000,ko01003,ko02000	Glycosyl transferase
PNNFFKII_00988	5.28e-213	yijG	-	GT2	M	ko:K11936	ko02026,map02026	ko00000,ko00001,ko01000,ko01003,ko02000	Glycosyl transferase
PNNFFKII_00990	9.68e-134	ytqB	-	-	J	-	-	-	Putative rRNA methylase
PNNFFKII_00991	3.3e-151	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
PNNFFKII_00992	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
PNNFFKII_00993	2.28e-70	-	-	-	-	-	-	-	-
PNNFFKII_00994	8.7e-157	-	-	-	P	ko:K01990	-	ko00000,ko00002,ko02000	ABC-type multidrug transport system ATPase component
PNNFFKII_00995	2.41e-187	-	-	-	S	-	-	-	NADPH-dependent FMN reductase
PNNFFKII_00996	2.16e-68	-	-	-	-	-	-	-	-
PNNFFKII_00997	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
PNNFFKII_00998	1.69e-161	-	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	pseudouridine synthase activity
PNNFFKII_00999	1.89e-191	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PNNFFKII_01000	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
PNNFFKII_01001	1.85e-110	-	-	-	T	-	-	-	Belongs to the universal stress protein A family
PNNFFKII_01002	5.48e-260	ald	1.4.1.1	-	C	ko:K00259	ko00250,ko00430,ko01100,map00250,map00430,map01100	ko00000,ko00001,ko01000	Belongs to the AlaDH PNT family
PNNFFKII_01003	2.4e-312	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
PNNFFKII_01004	1.34e-72	-	-	-	S	-	-	-	Small secreted protein
PNNFFKII_01005	1.33e-73	ytpP	-	-	CO	-	-	-	Thioredoxin
PNNFFKII_01006	9.43e-146	ytpR	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PNNFFKII_01007	0.0	sftA	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
PNNFFKII_01008	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
PNNFFKII_01009	8.02e-171	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
PNNFFKII_01010	4.23e-153	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
PNNFFKII_01011	1.7e-299	-	-	-	F	ko:K03458	-	ko00000	Permease
PNNFFKII_01012	0.0	guaD	3.5.4.3	-	F	ko:K01487	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	Amidohydrolase family
PNNFFKII_01013	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PNNFFKII_01014	4.06e-211	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PNNFFKII_01015	2.06e-143	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PNNFFKII_01016	4.94e-114	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PNNFFKII_01017	1.7e-314	dnaB	-	-	L	ko:K03346	-	ko00000,ko03032	replication initiation and membrane attachment
PNNFFKII_01018	5.51e-211	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
PNNFFKII_01019	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PNNFFKII_01020	2.31e-101	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PNNFFKII_01021	5.7e-36	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
PNNFFKII_01022	6.09e-72	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PNNFFKII_01023	2.6e-134	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
PNNFFKII_01024	9.12e-285	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
PNNFFKII_01025	1.5e-64	yhbY	-	-	J	ko:K07574	-	ko00000,ko03009	RNA-binding protein
PNNFFKII_01026	4.53e-152	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PNNFFKII_01027	2.65e-140	yqeK	-	-	H	-	-	-	Hydrolase, HD family
PNNFFKII_01028	3.15e-78	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PNNFFKII_01029	2.15e-182	yqeM	-	-	Q	-	-	-	Methyltransferase
PNNFFKII_01030	7.73e-278	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
PNNFFKII_01031	4.1e-124	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
PNNFFKII_01032	4.39e-39	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
PNNFFKII_01033	3.7e-190	-	3.1.3.23	-	S	ko:K07757	-	ko00000,ko01000	Sucrose-6F-phosphate phosphohydrolase
PNNFFKII_01034	5.57e-70	czrA	-	-	K	ko:K22043	-	ko00000,ko03000	Transcriptional regulator, ArsR family
PNNFFKII_01035	8.69e-149	-	-	-	O	-	-	-	Zinc-dependent metalloprotease
PNNFFKII_01036	1.8e-247	adhP	1.1.1.1	-	C	ko:K00001,ko:K13953	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
PNNFFKII_01037	3.25e-154	csrR	-	-	K	-	-	-	response regulator
PNNFFKII_01038	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PNNFFKII_01039	2.35e-92	yxeA	-	-	S	-	-	-	Protein of unknown function (DUF1093)
PNNFFKII_01040	4.32e-204	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PNNFFKII_01041	3.93e-59	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
PNNFFKII_01042	5.03e-181	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PNNFFKII_01043	2.46e-118	-	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
PNNFFKII_01044	1.03e-88	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
PNNFFKII_01045	1.45e-258	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PNNFFKII_01046	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PNNFFKII_01047	3.09e-266	mltG	-	-	S	ko:K07082	-	ko00000	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PNNFFKII_01048	5.67e-155	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Cytidine monophosphokinase
PNNFFKII_01049	6.68e-93	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PNNFFKII_01050	8.94e-75	yneR	-	-	S	-	-	-	Belongs to the HesB IscA family
PNNFFKII_01051	0.0	-	-	-	S	-	-	-	membrane
PNNFFKII_01052	5.88e-38	-	-	-	S	ko:K09779	-	ko00000	Domain of unknown function (DUF378)
PNNFFKII_01053	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
PNNFFKII_01054	5.33e-30	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
PNNFFKII_01055	2.21e-127	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PNNFFKII_01056	6.85e-155	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Peptidase, S54 family
PNNFFKII_01057	9.85e-49	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
PNNFFKII_01058	3.99e-232	glcK	2.7.1.2	-	G	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Glucokinase
PNNFFKII_01059	1.11e-92	yqhL	-	-	P	-	-	-	Rhodanese-like protein
PNNFFKII_01060	1.23e-32	WQ51_02665	-	-	S	-	-	-	Protein of unknown function (DUF3042)
PNNFFKII_01061	2.92e-182	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	phosphodiesterase
PNNFFKII_01062	5.17e-220	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PNNFFKII_01063	7.74e-86	glnR	-	-	K	ko:K03713,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000,ko03000	Transcriptional regulator
PNNFFKII_01064	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
PNNFFKII_01065	1.11e-201	-	-	-	-	-	-	-	-
PNNFFKII_01066	7.15e-230	-	-	-	-	-	-	-	-
PNNFFKII_01067	7.73e-127	-	-	-	S	-	-	-	Protein conserved in bacteria
PNNFFKII_01068	8.42e-124	-	-	-	K	-	-	-	Transcriptional regulator
PNNFFKII_01069	5.22e-65	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
PNNFFKII_01070	7.92e-76	ysxB	-	-	J	ko:K07584	-	ko00000	Cysteine protease Prp
PNNFFKII_01071	8.46e-65	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
PNNFFKII_01072	7.11e-253	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
PNNFFKII_01073	5.18e-128	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PNNFFKII_01074	8.9e-96	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
PNNFFKII_01075	2.79e-97	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PNNFFKII_01076	3.85e-201	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PNNFFKII_01077	3.16e-312	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PNNFFKII_01078	1.65e-47	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PNNFFKII_01079	3.09e-213	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PNNFFKII_01080	3.41e-191	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
PNNFFKII_01081	9.88e-100	argR2	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
PNNFFKII_01082	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
PNNFFKII_01084	6.94e-70	-	-	-	-	-	-	-	-
PNNFFKII_01085	2.35e-134	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
PNNFFKII_01086	2.53e-42	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PNNFFKII_01087	9.37e-276	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PNNFFKII_01088	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PNNFFKII_01089	1.32e-221	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PNNFFKII_01090	1.7e-314	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PNNFFKII_01091	8.97e-171	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
PNNFFKII_01092	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
PNNFFKII_01093	4.57e-214	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PNNFFKII_01094	1.34e-152	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
PNNFFKII_01095	1.77e-165	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
PNNFFKII_01096	2.62e-89	-	-	-	L	ko:K07483,ko:K07497	-	ko00000	Helix-turn-helix domain
PNNFFKII_01097	3.07e-143	-	-	-	L	ko:K07497	-	ko00000	PFAM Integrase catalytic region
PNNFFKII_01098	4.64e-36	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
PNNFFKII_01099	1.43e-75	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
PNNFFKII_01100	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
PNNFFKII_01101	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PNNFFKII_01102	1.11e-240	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PNNFFKII_01103	9.76e-50	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PNNFFKII_01104	5.47e-167	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PNNFFKII_01105	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
PNNFFKII_01106	1.64e-249	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PNNFFKII_01107	8.53e-76	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PNNFFKII_01108	1.42e-279	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PNNFFKII_01109	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
PNNFFKII_01110	1.55e-272	-	-	-	S	-	-	-	associated with various cellular activities
PNNFFKII_01111	0.0	-	-	-	S	-	-	-	Putative metallopeptidase domain
PNNFFKII_01112	1.73e-63	-	-	-	-	-	-	-	-
PNNFFKII_01113	3.48e-58	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
PNNFFKII_01114	6.46e-54	ylqC	-	-	S	ko:K06960	-	ko00000	Belongs to the UPF0109 family
PNNFFKII_01115	8.79e-120	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PNNFFKII_01116	7.45e-182	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
PNNFFKII_01117	2.13e-76	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PNNFFKII_01118	9.21e-99	fabZ	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PNNFFKII_01119	2.5e-104	-	-	-	K	-	-	-	Transcriptional regulator
PNNFFKII_01120	3.29e-233	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PNNFFKII_01121	1.84e-49	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PNNFFKII_01122	1.47e-213	fabD	2.3.1.39	-	I	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	Malonyl CoA-acyl carrier protein transacylase
PNNFFKII_01123	2.74e-157	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	reductase
PNNFFKII_01124	8.3e-293	fabF	2.3.1.179	-	I	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PNNFFKII_01125	2.05e-94	accB	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PNNFFKII_01126	2e-94	fabZ2	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	FabA-like domain
PNNFFKII_01127	0.0	accC	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Acetyl-CoA carboxylase biotin carboxylase subunit
PNNFFKII_01128	9.5e-201	accD	2.1.3.15, 6.4.1.2	-	I	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PNNFFKII_01129	7.4e-178	accA	2.1.3.15, 6.4.1.2	-	I	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	alpha subunit
PNNFFKII_01130	3.13e-173	fabI	1.3.1.10, 1.3.1.9	-	I	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl- acyl-carrier-protein reductase NADH
PNNFFKII_01131	5.66e-186	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PNNFFKII_01132	6.62e-111	bioY	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	BioY family
PNNFFKII_01133	2.25e-70	-	-	-	S	-	-	-	MazG nucleotide pyrophosphohydrolase domain
PNNFFKII_01134	8.14e-120	entB	-	-	Q	-	-	-	Isochorismatase family
PNNFFKII_01135	1.92e-102	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
PNNFFKII_01136	8.55e-94	-	-	-	K	-	-	-	LytTr DNA-binding domain
PNNFFKII_01137	2.1e-65	-	-	-	N	ko:K18843	-	ko00000,ko02048	PFAM Uncharacterised protein family UPF0150
PNNFFKII_01138	3.9e-88	-	-	-	L	-	-	-	Putative transposase of IS4/5 family (DUF4096)
PNNFFKII_01139	1.49e-97	-	-	-	L	-	-	-	Transposase DDE domain
PNNFFKII_01140	1.54e-180	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
PNNFFKII_01141	3.96e-225	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_01144	1.92e-153	-	-	-	S	-	-	-	DJ-1/PfpI family
PNNFFKII_01145	1.31e-268	-	1.1.1.90	-	C	ko:K00055	ko00350,ko00360,ko00622,ko00623,ko01100,ko01120,ko01220,map00350,map00360,map00622,map00623,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Zn-dependent alcohol dehydrogenases, class III
PNNFFKII_01146	5.24e-191	-	-	-	K	-	-	-	LysR substrate binding domain
PNNFFKII_01147	2.28e-57	-	-	-	K	-	-	-	MerR, DNA binding
PNNFFKII_01148	7.26e-241	-	-	-	C	-	-	-	Aldo/keto reductase family
PNNFFKII_01149	1.67e-292	-	-	-	L	-	-	-	Transposase
PNNFFKII_01150	1.98e-243	rsgA_2	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PNNFFKII_01151	3.49e-100	katA	1.11.1.6	-	C	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	ko00000,ko00001,ko00002,ko01000	Belongs to the catalase family
PNNFFKII_01152	1.61e-223	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PNNFFKII_01153	0.0	potE	-	-	E	-	-	-	Amino Acid
PNNFFKII_01154	0.0	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PNNFFKII_01155	2.96e-198	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PNNFFKII_01156	1.22e-36	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
PNNFFKII_01157	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PNNFFKII_01159	2.47e-74	-	-	-	S	-	-	-	Protein of unknown function (DUF2975)
PNNFFKII_01160	6.21e-39	yozG	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
PNNFFKII_01161	2.09e-285	-	-	-	-	-	-	-	-
PNNFFKII_01162	1.41e-136	-	-	-	-	-	-	-	-
PNNFFKII_01163	7.55e-265	icaA	-	-	M	-	-	-	Glycosyl transferase family group 2
PNNFFKII_01164	5.82e-73	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PNNFFKII_01165	3.1e-143	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PNNFFKII_01166	0.0	yhcA	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PNNFFKII_01167	3.09e-133	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
PNNFFKII_01168	8.26e-92	arsC	1.20.4.1	-	T	ko:K03741	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PNNFFKII_01169	6.09e-53	-	-	-	S	-	-	-	Mor transcription activator family
PNNFFKII_01170	2.33e-56	-	-	-	S	-	-	-	Mor transcription activator family
PNNFFKII_01171	6.64e-162	-	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	N-acetylmuramoyl-L-alanine amidase
PNNFFKII_01173	9.32e-165	ybhF_2	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
PNNFFKII_01174	9.15e-250	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
PNNFFKII_01175	7.75e-145	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PNNFFKII_01176	1.24e-225	lctO	1.13.12.4	-	C	ko:K00467,ko:K10530	ko00620,map00620	ko00000,ko00001,ko01000	L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
PNNFFKII_01177	1.45e-78	-	-	-	S	-	-	-	Belongs to the HesB IscA family
PNNFFKII_01178	1.5e-167	nhaK	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
PNNFFKII_01179	6.71e-30	nhaK	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
PNNFFKII_01181	1.03e-37	yycB	-	-	P	ko:K03449	-	ko00000,ko02000	Major Facilitator Superfamily
PNNFFKII_01182	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
PNNFFKII_01183	8.1e-236	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
PNNFFKII_01184	5.39e-23	-	-	-	GM	-	-	-	Male sterility protein
PNNFFKII_01185	5.8e-92	-	-	-	GM	-	-	-	Male sterility protein
PNNFFKII_01186	3.48e-103	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PNNFFKII_01187	1.61e-87	-	-	-	K	ko:K18909	-	ko00000,ko00002,ko01504,ko03000	MarR family
PNNFFKII_01188	1.34e-66	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2316)
PNNFFKII_01189	1.97e-253	adhB	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
PNNFFKII_01190	3.18e-49	-	-	-	K	-	-	-	Transcriptional regulator
PNNFFKII_01191	1e-37	-	-	-	K	-	-	-	Transcriptional regulator
PNNFFKII_01192	2.85e-209	akr5f	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
PNNFFKII_01193	5.34e-212	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	Oxidoreductase, aldo keto reductase family protein
PNNFFKII_01194	2.51e-108	-	-	-	-	-	-	-	-
PNNFFKII_01195	9.71e-274	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
PNNFFKII_01196	2.07e-196	yitU	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
PNNFFKII_01197	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
PNNFFKII_01198	7.01e-244	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PNNFFKII_01199	1.29e-261	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
PNNFFKII_01200	2.91e-230	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
PNNFFKII_01201	1.74e-222	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	mevalonate kinase
PNNFFKII_01202	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
PNNFFKII_01203	1.53e-113	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
PNNFFKII_01204	1.13e-271	aspB	2.6.1.1, 2.6.1.14	-	E	ko:K00812,ko:K22457	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase
PNNFFKII_01205	1.33e-159	dnaD	-	-	L	ko:K02086	-	ko00000	Replication initiation and membrane attachment
PNNFFKII_01206	2.51e-115	yetL	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PNNFFKII_01207	2.29e-81	-	-	-	P	-	-	-	Rhodanese Homology Domain
PNNFFKII_01208	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
PNNFFKII_01209	4.06e-146	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PNNFFKII_01210	1.96e-138	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
PNNFFKII_01211	7e-52	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PNNFFKII_01213	8.39e-281	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
PNNFFKII_01214	2.51e-90	-	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
PNNFFKII_01215	1.67e-315	amt	-	-	P	ko:K03320	-	ko00000,ko02000	ammonium transporter
PNNFFKII_01216	1.17e-38	-	-	-	-	-	-	-	-
PNNFFKII_01217	2.96e-109	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	Belongs to the Nudix hydrolase family
PNNFFKII_01218	1.16e-72	-	-	-	-	-	-	-	-
PNNFFKII_01219	1.57e-163	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PNNFFKII_01220	2.91e-110	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PNNFFKII_01221	1.79e-144	XK27_02070	-	-	S	ko:K07078	-	ko00000	Nitroreductase family
PNNFFKII_01222	5.32e-265	yurR	1.4.5.1	-	E	ko:K00285	ko00360,map00360	ko00000,ko00001,ko01000	FAD dependent oxidoreductase
PNNFFKII_01223	1.59e-90	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Ribonuclease HI
PNNFFKII_01224	2.1e-74	esbA	-	-	S	-	-	-	Family of unknown function (DUF5322)
PNNFFKII_01225	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
PNNFFKII_01226	5.54e-88	-	-	-	L	-	-	-	Putative transposase of IS4/5 family (DUF4096)
PNNFFKII_01227	1.49e-97	-	-	-	L	-	-	-	Transposase DDE domain
PNNFFKII_01228	7.74e-106	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PNNFFKII_01229	3.12e-221	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PNNFFKII_01230	6.85e-115	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PNNFFKII_01231	8.1e-261	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the CarA family
PNNFFKII_01232	0.0	pyrAB2	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
PNNFFKII_01233	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
PNNFFKII_01234	2.12e-92	-	-	-	K	-	-	-	Transcriptional regulator
PNNFFKII_01235	5.4e-253	npp	-	-	S	-	-	-	type I phosphodiesterase nucleotide pyrophosphatase
PNNFFKII_01236	1.28e-295	yxiO	-	-	S	ko:K06902	ko04138,map04138	ko00000,ko00001,ko02000,ko04131	Vacuole effluxer Atg22 like
PNNFFKII_01237	2.42e-204	-	-	-	S	-	-	-	EDD domain protein, DegV family
PNNFFKII_01238	1.61e-113	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
PNNFFKII_01239	2.46e-97	gtcA	-	-	S	-	-	-	Teichoic acid glycosylation protein
PNNFFKII_01240	6.2e-114	ysaA	-	-	V	-	-	-	VanZ like family
PNNFFKII_01241	4.56e-120	-	-	-	V	-	-	-	VanZ like family
PNNFFKII_01242	2.15e-153	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PNNFFKII_01243	3.27e-187	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PNNFFKII_01244	3.15e-229	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
PNNFFKII_01245	1.02e-191	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase
PNNFFKII_01246	4.15e-170	-	-	-	Q	-	-	-	Methyltransferase domain
PNNFFKII_01247	6.46e-219	-	-	-	-	-	-	-	-
PNNFFKII_01248	9.52e-43	-	-	-	-	-	-	-	-
PNNFFKII_01249	1.9e-257	xerS	-	-	L	ko:K04763	-	ko00000,ko03036	Belongs to the 'phage' integrase family
PNNFFKII_01250	3.93e-99	rppH3	-	-	F	-	-	-	NUDIX domain
PNNFFKII_01251	1.63e-131	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PNNFFKII_01252	1e-106	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
PNNFFKII_01253	2.69e-226	-	-	-	L	ko:K07482	-	ko00000	Integrase core domain
PNNFFKII_01254	1e-132	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
PNNFFKII_01255	1.94e-216	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
PNNFFKII_01256	1.06e-235	-	-	-	K	-	-	-	Transcriptional regulator
PNNFFKII_01257	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PNNFFKII_01258	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PNNFFKII_01259	5.45e-138	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PNNFFKII_01260	1.04e-215	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
PNNFFKII_01261	0.0	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PNNFFKII_01262	1.68e-121	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PNNFFKII_01263	5.87e-228	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Belongs to the 'phage' integrase family. XerC subfamily
PNNFFKII_01264	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PNNFFKII_01265	4.76e-215	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
PNNFFKII_01266	1.45e-174	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PNNFFKII_01267	2.42e-203	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PNNFFKII_01269	9.5e-98	abiGI	-	-	K	-	-	-	Psort location Cytoplasmic, score
PNNFFKII_01272	7.45e-166	-	-	-	-	-	-	-	-
PNNFFKII_01273	6.56e-48	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
PNNFFKII_01274	9.91e-137	ypmS	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2140)
PNNFFKII_01275	1.47e-214	XK27_03630	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
PNNFFKII_01276	1.23e-190	WQ51_01275	-	-	S	-	-	-	EDD domain protein, DegV family
PNNFFKII_01277	1.06e-147	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
PNNFFKII_01278	3.73e-261	-	-	-	L	-	-	-	Transposase
PNNFFKII_01279	2.79e-224	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PNNFFKII_01280	1e-116	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PNNFFKII_01281	3.88e-240	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PNNFFKII_01282	0.0	yfmR	-	-	S	ko:K15738	-	ko00000,ko02000	ABC transporter, ATP-binding protein
PNNFFKII_01283	5.97e-285	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PNNFFKII_01284	1.8e-218	ypjC	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PNNFFKII_01285	5.25e-297	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
PNNFFKII_01286	4.58e-54	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PNNFFKII_01287	2.29e-315	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
PNNFFKII_01288	2.29e-278	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
PNNFFKII_01289	9.33e-153	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
PNNFFKII_01290	4.61e-63	-	-	-	M	-	-	-	Lysin motif
PNNFFKII_01291	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
PNNFFKII_01292	9.21e-244	-	-	-	S	-	-	-	Helix-turn-helix domain
PNNFFKII_01293	6.4e-121	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PNNFFKII_01294	2.58e-166	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
PNNFFKII_01295	1.7e-133	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PNNFFKII_01296	1.54e-170	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PNNFFKII_01297	7.96e-94	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PNNFFKII_01298	2.17e-212	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
PNNFFKII_01299	8.89e-214	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
PNNFFKII_01300	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
PNNFFKII_01301	7.92e-162	tal2	2.2.1.2	-	H	ko:K00616	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transaldolase/Fructose-6-phosphate aldolase
PNNFFKII_01302	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
PNNFFKII_01303	0.0	clpB	-	-	O	ko:K03695	ko04213,map04213	ko00000,ko00001,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PNNFFKII_01304	3.57e-301	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
PNNFFKII_01305	5.29e-198	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PNNFFKII_01306	1.14e-162	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
PNNFFKII_01307	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
PNNFFKII_01308	1.21e-115	-	-	-	K	-	-	-	Transcriptional regulator
PNNFFKII_01309	9.66e-252	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PNNFFKII_01310	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PNNFFKII_01311	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
PNNFFKII_01312	7.13e-227	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
PNNFFKII_01313	7.51e-194	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
PNNFFKII_01314	1.27e-217	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PNNFFKII_01315	1.93e-81	dgkA	2.7.1.107, 2.7.1.66	-	M	ko:K00887,ko:K00901	ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231	ko00000,ko00001,ko01000	Diacylglycerol kinase
PNNFFKII_01316	1.22e-112	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PNNFFKII_01317	2.4e-231	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
PNNFFKII_01318	1.72e-94	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
PNNFFKII_01319	1.45e-89	ydeP	-	-	K	-	-	-	Transcriptional regulator, HxlR family
PNNFFKII_01320	2.2e-250	qor	1.1.1.1, 1.6.5.5	-	C	ko:K00001,ko:K00344	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
PNNFFKII_01321	2.21e-30	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
PNNFFKII_01322	1.69e-193	yqfL	2.7.11.33, 2.7.4.28	-	F	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PNNFFKII_01323	1.73e-219	nfo	3.1.21.2	-	L	ko:K01151	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PNNFFKII_01324	6.21e-308	-	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	glycerophosphotransferase
PNNFFKII_01325	1.84e-194	tagG	-	-	U	ko:K09692	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transport permease protein
PNNFFKII_01326	9.98e-262	tagB	2.7.8.44	-	M	ko:K21285	-	ko00000,ko01000	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PNNFFKII_01327	3.33e-208	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PNNFFKII_01328	6.29e-81	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PNNFFKII_01329	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PNNFFKII_01330	6.85e-315	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
PNNFFKII_01331	4.01e-127	-	-	-	-	-	-	-	-
PNNFFKII_01332	3.46e-206	lytH	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	N-acetylmuramoyl-L-alanine amidase
PNNFFKII_01333	1.26e-209	-	-	-	G	-	-	-	Fructosamine kinase
PNNFFKII_01334	3.07e-143	-	-	-	L	ko:K07497	-	ko00000	PFAM Integrase catalytic region
PNNFFKII_01335	2.62e-89	-	-	-	L	ko:K07483,ko:K07497	-	ko00000	Helix-turn-helix domain
PNNFFKII_01336	3.17e-149	-	-	-	S	-	-	-	HAD-hyrolase-like
PNNFFKII_01337	4.95e-98	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PNNFFKII_01338	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PNNFFKII_01339	9.64e-81	-	-	-	-	-	-	-	-
PNNFFKII_01340	7.68e-173	rsmE	2.1.1.193	-	J	ko:K09761	-	ko00000,ko01000,ko03009	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PNNFFKII_01341	9.42e-232	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
PNNFFKII_01342	1.79e-71	-	-	-	-	-	-	-	-
PNNFFKII_01343	7.94e-65	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PNNFFKII_01344	6.81e-83	-	-	-	-	-	-	-	-
PNNFFKII_01346	7.67e-56	-	-	-	-	-	-	-	-
PNNFFKII_01348	2.82e-281	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
PNNFFKII_01350	2.69e-226	-	-	-	L	ko:K07482	-	ko00000	Integrase core domain
PNNFFKII_01351	1.38e-225	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_01352	1.49e-97	-	-	-	L	-	-	-	Transposase DDE domain
PNNFFKII_01353	5.54e-88	-	-	-	L	-	-	-	Putative transposase of IS4/5 family (DUF4096)
PNNFFKII_01354	4.6e-12	-	-	-	-	-	-	-	-
PNNFFKII_01355	1.61e-70	asp2	-	-	S	-	-	-	Asp23 family, cell envelope-related function
PNNFFKII_01356	3.04e-86	-	-	-	S	-	-	-	Asp23 family, cell envelope-related function
PNNFFKII_01357	1.71e-33	-	-	-	-	-	-	-	-
PNNFFKII_01358	7.78e-91	-	-	-	-	-	-	-	-
PNNFFKII_01359	9.29e-40	-	-	-	S	-	-	-	Transglycosylase associated protein
PNNFFKII_01360	5.74e-225	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
PNNFFKII_01362	4.37e-79	-	-	-	S	-	-	-	Bacteriophage holin family
PNNFFKII_01363	4.22e-30	-	-	-	-	-	-	-	-
PNNFFKII_01365	6.25e-66	-	-	-	-	-	-	-	-
PNNFFKII_01366	5.59e-77	-	-	-	-	-	-	-	-
PNNFFKII_01368	7.37e-86	-	-	-	S	-	-	-	Baseplate J-like protein
PNNFFKII_01371	1.82e-78	-	-	-	-	-	-	-	-
PNNFFKII_01372	9.19e-10	-	-	-	-	-	-	-	-
PNNFFKII_01373	5.1e-38	-	-	-	M	-	-	-	LysM domain
PNNFFKII_01374	0.0	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
PNNFFKII_01377	1.45e-30	-	-	-	-	-	-	-	-
PNNFFKII_01381	5.25e-37	-	-	-	-	-	-	-	-
PNNFFKII_01384	4.26e-06	-	-	-	DZ	-	-	-	regulator of chromosome condensation, RCC1
PNNFFKII_01389	8.73e-63	-	-	-	S	-	-	-	Phage portal protein, SPP1 Gp6-like
PNNFFKII_01390	1.94e-166	-	-	-	S	-	-	-	Terminase-like family
PNNFFKII_01391	1.48e-43	-	-	-	S	-	-	-	DNA packaging
PNNFFKII_01398	3.44e-37	-	-	-	T	-	-	-	Universal stress protein family
PNNFFKII_01399	9.51e-26	-	-	-	S	-	-	-	RloB-like protein
PNNFFKII_01400	2.9e-196	-	-	-	S	ko:K06926	-	ko00000	AAA domain, putative AbiEii toxin, Type IV TA system
PNNFFKII_01408	1.7e-55	-	-	-	S	-	-	-	Endodeoxyribonuclease RusA
PNNFFKII_01409	2.38e-67	-	-	-	K	ko:K07741	-	ko00000	AntA/AntB antirepressor
PNNFFKII_01410	1.51e-44	-	-	-	L	-	-	-	Domain of unknown function (DUF4373)
PNNFFKII_01411	1.12e-98	pi112	-	-	L	-	-	-	PDDEXK-like domain of unknown function (DUF3799)
PNNFFKII_01412	7.22e-82	-	-	-	L	ko:K07455	-	ko00000,ko03400	RecT family
PNNFFKII_01421	3.01e-10	-	-	-	K	-	-	-	sequence-specific DNA binding
PNNFFKII_01422	6.61e-48	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PNNFFKII_01423	1.13e-59	-	-	-	E	-	-	-	IrrE N-terminal-like domain
PNNFFKII_01425	5.07e-41	-	-	-	-	-	-	-	-
PNNFFKII_01426	4.22e-22	-	-	-	-	-	-	-	-
PNNFFKII_01427	3.62e-25	-	-	-	-	-	-	-	-
PNNFFKII_01429	2.95e-29	-	-	-	-	-	-	-	-
PNNFFKII_01430	0.000902	mrsA1	1.8.4.11	-	O	ko:K07304	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PNNFFKII_01431	2.69e-226	-	-	-	L	ko:K07482	-	ko00000	Integrase core domain
PNNFFKII_01433	7.44e-168	int7	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PNNFFKII_01434	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PNNFFKII_01435	0.0	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PNNFFKII_01436	1.02e-46	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PNNFFKII_01437	8.72e-301	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
PNNFFKII_01438	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PNNFFKII_01439	8.25e-25	dltX	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
PNNFFKII_01440	2e-248	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PNNFFKII_01441	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
PNNFFKII_01442	2.51e-123	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PNNFFKII_01443	8.18e-243	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PNNFFKII_01444	5.47e-278	-	-	-	L	-	-	-	Transposase
PNNFFKII_01445	4.14e-230	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
PNNFFKII_01446	2.19e-219	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PNNFFKII_01447	1.77e-74	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PNNFFKII_01448	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PNNFFKII_01449	4.88e-60	ylxQ	-	-	J	-	-	-	ribosomal protein
PNNFFKII_01450	2.64e-63	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
PNNFFKII_01451	2.34e-252	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
PNNFFKII_01452	3.03e-106	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
PNNFFKII_01453	4.41e-52	-	-	-	-	-	-	-	-
PNNFFKII_01454	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PNNFFKII_01455	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PNNFFKII_01456	8.39e-297	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
PNNFFKII_01457	3.93e-177	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
PNNFFKII_01458	2.94e-192	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PNNFFKII_01459	3.42e-97	-	-	-	-	-	-	-	-
PNNFFKII_01460	2.83e-111	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PNNFFKII_01461	2.12e-165	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
PNNFFKII_01462	2.79e-197	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PNNFFKII_01463	9.38e-187	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
PNNFFKII_01464	9.81e-175	-	-	-	S	ko:K07025	-	ko00000	Haloacid dehalogenase-like hydrolase
PNNFFKII_01465	4.53e-238	ldhD	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PNNFFKII_01466	5.19e-59	yazA	-	-	L	ko:K07461	-	ko00000	GIY-YIG catalytic domain protein
PNNFFKII_01467	1.02e-176	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
PNNFFKII_01468	2.07e-154	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
PNNFFKII_01469	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PNNFFKII_01470	0.0	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PNNFFKII_01471	1.61e-44	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
PNNFFKII_01472	2.61e-49	ynzC	-	-	S	-	-	-	UPF0291 protein
PNNFFKII_01473	1.39e-141	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PNNFFKII_01474	5.8e-101	-	-	-	F	-	-	-	nucleoside 2-deoxyribosyltransferase
PNNFFKII_01475	7.05e-115	-	-	-	-	-	-	-	-
PNNFFKII_01476	7.73e-277	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
PNNFFKII_01477	1.26e-213	-	-	-	S	-	-	-	Polyphosphate nucleotide phosphotransferase, PPK2 family
PNNFFKII_01478	1.63e-159	pgm3	-	-	G	-	-	-	phosphoglycerate mutase
PNNFFKII_01479	2.94e-34	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain
PNNFFKII_01480	5.07e-108	ndk	2.7.4.6	-	F	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	ko00000,ko00001,ko00002,ko01000,ko04131	Belongs to the NDK family
PNNFFKII_01484	4.78e-91	-	-	-	S	-	-	-	TIR domain
PNNFFKII_01485	2.69e-226	-	-	-	L	ko:K07482	-	ko00000	Integrase core domain
PNNFFKII_01486	1.12e-213	-	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
PNNFFKII_01487	5.89e-98	-	-	-	-	-	-	-	-
PNNFFKII_01488	6.11e-11	-	-	-	K	-	-	-	CsbD-like
PNNFFKII_01489	7.24e-102	-	-	-	T	-	-	-	Universal stress protein family
PNNFFKII_01490	3.06e-120	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PNNFFKII_01491	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
PNNFFKII_01492	4.43e-72	yrvD	-	-	S	-	-	-	Pfam:DUF1049
PNNFFKII_01493	6.88e-230	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PNNFFKII_01494	1.36e-37	-	-	-	-	-	-	-	-
PNNFFKII_01495	2.51e-158	-	-	-	-	-	-	-	-
PNNFFKII_01496	2.81e-314	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PNNFFKII_01497	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PNNFFKII_01498	1.21e-22	-	-	-	-	-	-	-	-
PNNFFKII_01499	4.51e-69	-	-	-	S	-	-	-	mazG nucleotide pyrophosphohydrolase
PNNFFKII_01500	3.22e-141	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
PNNFFKII_01501	5.91e-298	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PNNFFKII_01502	1.02e-298	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PNNFFKII_01503	9.97e-288	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PNNFFKII_01504	2.17e-213	-	-	-	S	-	-	-	Tetratricopeptide repeat
PNNFFKII_01505	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PNNFFKII_01506	2.9e-56	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PNNFFKII_01507	8e-45	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
PNNFFKII_01508	1.99e-237	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
PNNFFKII_01509	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
PNNFFKII_01510	7.41e-117	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	ComE operon protein 2
PNNFFKII_01511	1.22e-155	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
PNNFFKII_01512	1.54e-249	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
PNNFFKII_01513	4.98e-107	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PNNFFKII_01514	2.66e-126	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
PNNFFKII_01515	1.33e-57	ylbG	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2129)
PNNFFKII_01516	1.04e-267	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
PNNFFKII_01517	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
PNNFFKII_01518	7.71e-184	suhB	3.1.3.25	-	G	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the inositol monophosphatase superfamily
PNNFFKII_01519	7.2e-61	yktA	-	-	S	-	-	-	Belongs to the UPF0223 family
PNNFFKII_01520	2.72e-208	-	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	L-malate dehydrogenase activity
PNNFFKII_01521	0.0	pdhD	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	Dehydrogenase
PNNFFKII_01522	1.64e-285	pdhC	2.3.1.12	-	C	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PNNFFKII_01523	1.15e-232	pdhB	1.2.4.1	-	C	ko:K00162	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Transketolase, C-terminal domain protein
PNNFFKII_01524	4.77e-271	pdhA	1.2.4.1	-	C	ko:K00161	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	Dehydrogenase E1 component
PNNFFKII_01525	9.7e-133	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PNNFFKII_01526	9.18e-105	-	-	-	-	-	-	-	-
PNNFFKII_01527	9.82e-45	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
PNNFFKII_01528	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PNNFFKII_01529	2.84e-239	-	-	-	I	-	-	-	Diacylglycerol kinase catalytic
PNNFFKII_01530	6.66e-39	-	-	-	-	-	-	-	-
PNNFFKII_01531	9.97e-214	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
PNNFFKII_01532	5.17e-223	ypuA	-	-	S	-	-	-	Protein of unknown function (DUF1002)
PNNFFKII_01533	8.94e-220	ykfC	3.4.14.13	-	M	ko:K20742	-	ko00000,ko01000,ko01002	NlpC/P60 family
PNNFFKII_01534	0.0	tkt2	2.2.1.1	-	H	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PNNFFKII_01535	3.56e-206	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PNNFFKII_01536	8.04e-237	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PNNFFKII_01537	2.25e-241	yghZ	-	-	C	ko:K19265	-	ko00000,ko01000	Aldo keto reductase family protein
PNNFFKII_01538	2.29e-200	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PNNFFKII_01539	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
PNNFFKII_01540	0.0	nylA	3.5.1.4	-	J	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	ko00000,ko00001,ko01000	Belongs to the amidase family
PNNFFKII_01541	9.88e-206	yckB	-	-	ET	ko:K02030,ko:K02424	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko02035	Belongs to the bacterial solute-binding protein 3 family
PNNFFKII_01542	6.33e-157	yckA	-	-	E	ko:K10009	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PNNFFKII_01543	3.99e-165	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
PNNFFKII_01544	4.45e-227	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PNNFFKII_01545	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PNNFFKII_01546	4.62e-153	-	-	-	S	-	-	-	repeat protein
PNNFFKII_01547	2.23e-156	pgm6	-	-	G	-	-	-	phosphoglycerate mutase
PNNFFKII_01548	2.57e-282	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PNNFFKII_01549	1.79e-77	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
PNNFFKII_01550	2.86e-288	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
PNNFFKII_01551	3.68e-161	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PNNFFKII_01552	1.36e-47	-	-	-	-	-	-	-	-
PNNFFKII_01553	2.49e-123	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
PNNFFKII_01554	4.08e-47	cspB	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
PNNFFKII_01555	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PNNFFKII_01556	3.87e-134	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
PNNFFKII_01557	8.04e-184	ylmH	-	-	S	-	-	-	S4 domain protein
PNNFFKII_01558	3.42e-55	ylmG	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
PNNFFKII_01559	2.58e-98	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PNNFFKII_01560	1.48e-287	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PNNFFKII_01561	7.41e-311	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PNNFFKII_01562	9.4e-198	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PNNFFKII_01563	2.92e-257	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PNNFFKII_01564	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PNNFFKII_01565	3.06e-236	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PNNFFKII_01566	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
PNNFFKII_01567	7.06e-79	ftsL	-	-	D	-	-	-	Cell division protein FtsL
PNNFFKII_01568	7.42e-228	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PNNFFKII_01569	1.38e-102	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
PNNFFKII_01570	8.72e-80	-	-	-	S	-	-	-	Protein of unknown function (DUF3397)
PNNFFKII_01571	4.92e-18	-	-	-	S	-	-	-	Protein of unknown function (DUF4044)
PNNFFKII_01572	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
PNNFFKII_01573	1.72e-125	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PNNFFKII_01574	3.2e-207	rrmA	2.1.1.187	-	H	ko:K00563,ko:K10947	-	ko00000,ko01000,ko03000,ko03009	Methyltransferase
PNNFFKII_01575	1.84e-262	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
PNNFFKII_01576	3.71e-139	cutC	-	-	P	ko:K06201	-	ko00000	Participates in the control of copper homeostasis
PNNFFKII_01577	4.02e-19	-	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
PNNFFKII_01578	0.0	tagE3	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
PNNFFKII_01579	0.0	tagE2	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
PNNFFKII_01580	1.11e-37	-	-	-	-	-	-	-	-
PNNFFKII_01581	2.22e-83	-	-	-	S	-	-	-	Pfam Methyltransferase
PNNFFKII_01582	2.97e-79	-	-	-	M	-	-	-	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
PNNFFKII_01583	1.56e-90	-	-	-	S	-	-	-	Pfam Methyltransferase
PNNFFKII_01584	2.79e-224	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PNNFFKII_01585	7.1e-223	yjbO	5.4.99.23	-	G	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PNNFFKII_01586	1.29e-193	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PNNFFKII_01587	9.43e-154	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
PNNFFKII_01588	1.7e-148	yjbH	-	-	Q	-	-	-	Thioredoxin
PNNFFKII_01589	3.19e-204	degV1	-	-	S	-	-	-	DegV family
PNNFFKII_01590	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
PNNFFKII_01591	3.22e-270	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
PNNFFKII_01592	7.82e-160	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PNNFFKII_01593	7.79e-193	ytmP	-	-	M	-	-	-	Choline/ethanolamine kinase
PNNFFKII_01594	5.74e-284	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
PNNFFKII_01595	2.85e-173	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PNNFFKII_01596	1.52e-108	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	histidine triad
PNNFFKII_01597	1.78e-67	-	-	-	-	-	-	-	-
PNNFFKII_01598	5.12e-194	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PNNFFKII_01599	4.89e-238	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
PNNFFKII_01600	0.0	yhaN	-	-	L	-	-	-	AAA domain
PNNFFKII_01601	2.3e-297	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
PNNFFKII_01602	2.44e-71	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
PNNFFKII_01603	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
PNNFFKII_01604	5.9e-103	argR	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
PNNFFKII_01605	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
PNNFFKII_01607	3.49e-24	-	-	-	-	-	-	-	-
PNNFFKII_01608	7.26e-304	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
PNNFFKII_01609	2.14e-127	ywjB	-	-	H	-	-	-	RibD C-terminal domain
PNNFFKII_01610	4.57e-71	-	-	-	S	-	-	-	Protein of unknown function (DUF1516)
PNNFFKII_01611	3.16e-170	racX	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
PNNFFKII_01612	0.0	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
PNNFFKII_01613	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
PNNFFKII_01614	4.42e-154	rcfA	-	-	K	ko:K21562	-	ko00000,ko03000	Transcriptional regulator, Crp Fnr family
PNNFFKII_01615	0.0	-	-	-	E	-	-	-	Peptidase family C69
PNNFFKII_01616	1.18e-50	-	-	-	-	-	-	-	-
PNNFFKII_01617	0.0	-	-	-	-	-	-	-	-
PNNFFKII_01620	0.0	-	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	ABC transporter
PNNFFKII_01621	3.07e-143	-	-	-	L	ko:K07497	-	ko00000	PFAM Integrase catalytic region
PNNFFKII_01622	2.62e-89	-	-	-	L	ko:K07483,ko:K07497	-	ko00000	Helix-turn-helix domain
PNNFFKII_01624	4.08e-62	-	-	-	-	-	-	-	-
PNNFFKII_01625	7.16e-122	-	-	-	V	-	-	-	VanZ like family
PNNFFKII_01626	3.26e-106	ohrR	-	-	K	-	-	-	Transcriptional regulator
PNNFFKII_01627	4.3e-158	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PNNFFKII_01628	3.58e-51	-	-	-	-	-	-	-	-
PNNFFKII_01629	2.79e-226	-	1.1.1.26	-	CH	ko:K00015	ko00630,ko01100,ko01110,ko01120,map00630,map01100,map01110,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PNNFFKII_01630	0.0	trePP	2.4.1.216, 2.4.1.8	GH65	G	ko:K00691,ko:K03731	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Glycosyl hydrolase family 65 central catalytic domain
PNNFFKII_01631	2.48e-151	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
PNNFFKII_01632	6.55e-120	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
PNNFFKII_01633	9.46e-44	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
PNNFFKII_01634	1.03e-155	dgk2	-	-	F	-	-	-	Deoxynucleoside kinase
PNNFFKII_01635	1.39e-74	XK27_08430	-	-	S	-	-	-	Staphylococcal protein of unknown function (DUF960)
PNNFFKII_01636	0.0	mdr	-	-	EGP	-	-	-	Major Facilitator
PNNFFKII_01637	3.39e-274	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PNNFFKII_01638	1.42e-156	-	-	-	-	-	-	-	-
PNNFFKII_01639	2.78e-82	-	-	-	-	-	-	-	-
PNNFFKII_01640	1.54e-135	-	-	-	-	-	-	-	-
PNNFFKII_01641	3.44e-70	ybjQ	-	-	S	-	-	-	Belongs to the UPF0145 family
PNNFFKII_01642	1.01e-119	-	-	-	O	-	-	-	Zinc-dependent metalloprotease
PNNFFKII_01657	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PNNFFKII_01658	3.96e-49	ykuJ	-	-	S	-	-	-	Protein of unknown function (DUF1797)
PNNFFKII_01659	6.38e-235	mprF	-	-	S	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PNNFFKII_01660	2.1e-247	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
PNNFFKII_01661	5.74e-285	pimB	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
PNNFFKII_01662	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PNNFFKII_01663	2.6e-54	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
PNNFFKII_01664	3.61e-42	-	-	-	-	-	-	-	-
PNNFFKII_01665	0.0	clpE	-	-	O	ko:K03697	-	ko00000,ko03110	Belongs to the ClpA ClpB family
PNNFFKII_01666	1.12e-272	-	-	-	G	-	-	-	MucBP domain
PNNFFKII_01667	2.69e-226	-	-	-	L	ko:K07482	-	ko00000	Integrase core domain
PNNFFKII_01668	0.0	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	Cation transporter/ATPase, N-terminus
PNNFFKII_01669	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PNNFFKII_01670	0.0	nox	1.6.3.4	-	C	ko:K17869	-	ko00000,ko01000	NADH oxidase
PNNFFKII_01671	0.0	-	-	-	S	-	-	-	Leucine-rich repeat (LRR) protein
PNNFFKII_01672	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PNNFFKII_01673	6.28e-118	-	-	-	-	-	-	-	-
PNNFFKII_01674	0.0	tagF	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	glycerophosphotransferase
PNNFFKII_01675	1.06e-201	-	-	-	-	-	-	-	-
PNNFFKII_01676	2.51e-98	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Glycerol-3-phosphate cytidylyltransferase
PNNFFKII_01677	6.54e-253	yueF	-	-	S	-	-	-	AI-2E family transporter
PNNFFKII_01678	1.5e-140	ygaC	-	-	J	ko:K07586	-	ko00000	Belongs to the UPF0374 family
PNNFFKII_01679	2.15e-52	-	-	-	S	-	-	-	Bacteriocin-protection, YdeI or OmpD-Associated
PNNFFKII_01680	1.11e-282	pbpX2	-	-	V	-	-	-	Beta-lactamase
PNNFFKII_01681	8.69e-187	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
PNNFFKII_01682	6.23e-102	ykuP	-	-	C	ko:K03839	-	ko00000	Flavodoxin
PNNFFKII_01683	1.56e-203	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
PNNFFKII_01684	1.3e-201	-	-	-	S	-	-	-	Nuclease-related domain
PNNFFKII_01685	1.05e-272	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PNNFFKII_01686	1.87e-203	csbB	-	GT2	M	ko:K20534	-	ko00000,ko01000,ko01005,ko02000	Glycosyltransferase like family 2
PNNFFKII_01687	2.22e-296	gntP	-	-	EG	ko:K03299	-	ko00000,ko02000	Gluconate
PNNFFKII_01688	7.84e-101	-	-	-	T	-	-	-	Universal stress protein family
PNNFFKII_01690	8.74e-298	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
PNNFFKII_01691	4.05e-242	mocA	-	-	S	-	-	-	Oxidoreductase
PNNFFKII_01692	2.89e-84	-	-	-	S	-	-	-	Domain of unknown function (DUF4828)
PNNFFKII_01693	5.71e-190	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
PNNFFKII_01694	8.34e-195	gntR	-	-	K	-	-	-	rpiR family
PNNFFKII_01695	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
PNNFFKII_01696	4.42e-292	gntP	-	-	EG	ko:K03299	-	ko00000,ko02000	Gluconate
PNNFFKII_01697	2.1e-304	-	-	-	E	ko:K03294	-	ko00000	amino acid
PNNFFKII_01698	0.0	fucP	-	-	G	ko:K02429	-	ko00000,ko02000	Major Facilitator Superfamily
PNNFFKII_01699	5.83e-87	rbsD	5.4.99.62	-	G	ko:K06726	ko02010,map02010	ko00000,ko00001,ko01000	Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PNNFFKII_01700	0.0	gshA	6.3.2.2	-	H	ko:K01919	ko00270,ko00480,ko01100,map00270,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the glutamate--cysteine ligase type 1 family
PNNFFKII_01701	1.09e-307	pdp	2.4.2.2	-	F	ko:K00756	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	pyrimidine-nucleoside phosphorylase
PNNFFKII_01702	6.79e-222	deoR	-	-	K	ko:K05346	-	ko00000,ko03000	sugar-binding domain protein
PNNFFKII_01703	1.23e-166	deoD	2.4.2.1	-	F	ko:K03784	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Purine nucleoside phosphorylase
PNNFFKII_01704	2.68e-296	deoB	5.4.2.7	-	G	ko:K01839	ko00030,ko00230,map00030,map00230	ko00000,ko00001,ko01000	Phosphotransfer between the C1 and C5 carbon atoms of pentose
PNNFFKII_01705	1.05e-155	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PNNFFKII_01706	1.27e-50	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PNNFFKII_01707	1.06e-76	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PNNFFKII_01708	1.69e-186	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Pfam:Y_phosphatase3C
PNNFFKII_01709	1.87e-248	namA	-	-	C	-	-	-	Oxidoreductase
PNNFFKII_01710	1.47e-72	-	-	-	E	ko:K04031	-	ko00000	BMC
PNNFFKII_01711	1.64e-281	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PNNFFKII_01712	1.31e-269	pduQ	-	-	C	ko:K13921	ko00640,map00640	ko00000,ko00001	Iron-containing alcohol dehydrogenase
PNNFFKII_01713	0.0	pduP	1.2.1.87	-	C	ko:K13922	ko00640,map00640	ko00000,ko00001,ko01000	Aldehyde dehydrogenase family
PNNFFKII_01714	7.1e-106	pduO	-	-	S	-	-	-	Haem-degrading
PNNFFKII_01715	7.33e-135	-	-	-	S	-	-	-	Cobalamin adenosyltransferase
PNNFFKII_01716	3.12e-56	pduN	-	-	CQ	ko:K04028	-	ko00000	Ethanolamine utilisation protein EutN/carboxysome
PNNFFKII_01717	1.57e-118	-	-	-	S	-	-	-	Putative propanediol utilisation
PNNFFKII_01718	4.18e-147	pduL	2.3.1.222	-	Q	ko:K13923	ko00640,map00640	ko00000,ko00001,ko01000	Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate
PNNFFKII_01719	3.38e-56	pduJ	-	-	CQ	-	-	-	BMC
PNNFFKII_01720	1.43e-111	-	-	-	CQ	-	-	-	BMC
PNNFFKII_01721	2.32e-75	pduH	-	-	S	-	-	-	Dehydratase medium subunit
PNNFFKII_01722	0.0	pduG	-	-	D	-	-	-	Diol dehydratase reactivase ATPase-like domain
PNNFFKII_01723	7.77e-120	pduE	4.2.1.28	-	Q	ko:K13920	ko00640,map00640	ko00000,ko00001,ko01000	Dehydratase small subunit
PNNFFKII_01724	2.9e-167	pduD	4.2.1.28	-	Q	ko:K13919	ko00640,map00640	ko00000,ko00001,ko01000	Dehydratase medium subunit
PNNFFKII_01725	0.0	pduC	4.2.1.28	-	Q	ko:K01699	ko00640,map00640	ko00000,ko00001,ko01000	Dehydratase large subunit
PNNFFKII_01726	1.56e-166	pduB	-	-	E	-	-	-	BMC
PNNFFKII_01727	1.47e-55	-	-	-	CQ	-	-	-	BMC
PNNFFKII_01728	1.71e-264	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PNNFFKII_01729	4.82e-164	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
PNNFFKII_01730	3.37e-56	eutP	-	-	E	ko:K04029	-	ko00000	Ethanolamine utilisation - propanediol utilisation
PNNFFKII_01731	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PNNFFKII_01732	6.69e-239	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
PNNFFKII_01733	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PNNFFKII_01734	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PNNFFKII_01735	4.8e-66	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PNNFFKII_01736	1.33e-257	camS	-	-	S	-	-	-	sex pheromone
PNNFFKII_01737	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PNNFFKII_01738	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
PNNFFKII_01739	1.74e-274	purK2	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PNNFFKII_01740	1.86e-128	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PNNFFKII_01741	3.87e-208	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
PNNFFKII_01742	6.63e-232	hepT	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PNNFFKII_01743	0.0	cydD	-	-	CO	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
PNNFFKII_01744	0.0	cydC	-	-	CO	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PNNFFKII_01745	1.12e-224	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome d ubiquinol oxidase subunit II
PNNFFKII_01746	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
PNNFFKII_01747	2.4e-229	serA	1.1.1.399, 1.1.1.95	-	EH	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PNNFFKII_01748	1.04e-182	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PNNFFKII_01749	1.31e-170	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
PNNFFKII_01750	5.3e-56	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.99
PNNFFKII_01751	1.98e-196	cps1C	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
PNNFFKII_01752	5.29e-86	-	-	-	L	-	-	-	the current gene model (or a revised gene model) may contain a frame shift
PNNFFKII_01753	1.24e-210	glf	5.4.99.9	-	M	ko:K01854	ko00052,ko00520,map00052,map00520	ko00000,ko00001,ko01000	UDP-galactopyranose mutase
PNNFFKII_01754	1.18e-53	tagF	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
PNNFFKII_01755	6.08e-90	cps3B	-	-	S	ko:K07011	-	ko00000	Glycosyltransferase like family 2
PNNFFKII_01756	6.33e-225	-	-	-	L	ko:K07482	-	ko00000	Integrase core domain
PNNFFKII_01757	7.81e-113	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
PNNFFKII_01758	8.44e-121	epsB	-	-	M	-	-	-	biosynthesis protein
PNNFFKII_01759	2.69e-226	-	-	-	L	ko:K07482	-	ko00000	Integrase core domain
PNNFFKII_01760	8.08e-213	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
PNNFFKII_01761	4.39e-244	lplL	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Bacterial lipoate protein ligase C-terminus
PNNFFKII_01762	0.0	-	-	-	E	ko:K03294	-	ko00000	Amino Acid
PNNFFKII_01763	1.27e-250	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
PNNFFKII_01764	2.05e-104	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PNNFFKII_01765	5.99e-286	ribA	3.5.4.25, 4.1.99.12	-	H	ko:K02858,ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
PNNFFKII_01766	1.57e-134	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin synthase
PNNFFKII_01767	1.38e-251	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PNNFFKII_01768	9.37e-150	ktrA	-	-	P	ko:K03499	-	ko00000,ko02000	domain protein
PNNFFKII_01769	4.24e-305	ktrB	-	-	P	ko:K03498	-	ko00000,ko02000	Potassium uptake protein
PNNFFKII_01770	2.09e-247	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
PNNFFKII_01771	3.52e-83	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
PNNFFKII_01772	6.51e-103	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PNNFFKII_01773	1.91e-194	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PNNFFKII_01774	1.38e-183	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PNNFFKII_01775	3.08e-208	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PNNFFKII_01776	2.81e-194	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PNNFFKII_01777	6.64e-82	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
PNNFFKII_01778	2.1e-219	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PNNFFKII_01779	6.34e-81	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PNNFFKII_01780	2.37e-79	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PNNFFKII_01781	8.38e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PNNFFKII_01782	5.07e-158	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PNNFFKII_01783	1.12e-302	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PNNFFKII_01784	1.67e-90	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
PNNFFKII_01785	1.2e-33	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
PNNFFKII_01786	3.46e-110	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PNNFFKII_01787	8.69e-76	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PNNFFKII_01788	1.24e-122	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PNNFFKII_01789	3.78e-88	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PNNFFKII_01790	3.5e-40	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PNNFFKII_01791	3.53e-123	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PNNFFKII_01792	4.1e-67	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PNNFFKII_01793	1.04e-78	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PNNFFKII_01794	3.69e-54	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PNNFFKII_01795	3.87e-34	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
PNNFFKII_01796	3.95e-98	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PNNFFKII_01797	1.63e-154	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PNNFFKII_01798	9.77e-73	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PNNFFKII_01799	7.56e-62	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PNNFFKII_01800	1.63e-199	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PNNFFKII_01801	4.65e-58	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PNNFFKII_01802	5.45e-138	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
PNNFFKII_01803	1.19e-150	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PNNFFKII_01804	4.46e-66	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
PNNFFKII_01805	4.54e-301	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
PNNFFKII_01806	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PNNFFKII_01807	7.17e-109	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PNNFFKII_01808	1.46e-92	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PNNFFKII_01809	3.58e-156	comC	3.4.23.43	-	NOU	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	Bacterial Peptidase A24 N-terminal domain
PNNFFKII_01810	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PNNFFKII_01811	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PNNFFKII_01812	6.68e-136	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PNNFFKII_01813	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PNNFFKII_01814	5.66e-101	ctsR	-	-	K	ko:K03708	-	ko00000,ko03000	Belongs to the CtsR family
PNNFFKII_01823	1.09e-291	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PNNFFKII_01824	2.42e-147	dgk2	-	-	F	-	-	-	deoxynucleoside kinase
PNNFFKII_01825	0.0	lysP	-	-	E	ko:K03293,ko:K11733	-	ko00000,ko02000	amino acid
PNNFFKII_01827	5.08e-169	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PNNFFKII_01828	4.14e-154	-	-	-	I	-	-	-	phosphatase
PNNFFKII_01829	7.85e-96	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
PNNFFKII_01830	1.2e-161	-	-	-	S	-	-	-	Putative threonine/serine exporter
PNNFFKII_01831	4.18e-155	mntR	-	-	K	ko:K03709	-	ko00000,ko03000	iron dependent repressor
PNNFFKII_01832	5.04e-202	-	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
PNNFFKII_01833	8.61e-132	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PNNFFKII_01834	7.65e-101	-	-	-	K	-	-	-	MerR HTH family regulatory protein
PNNFFKII_01835	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
PNNFFKII_01836	1.25e-153	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
PNNFFKII_01837	1.27e-50	-	-	-	K	-	-	-	MerR HTH family regulatory protein
PNNFFKII_01838	2.38e-139	azlC	-	-	E	-	-	-	branched-chain amino acid
PNNFFKII_01839	1.62e-65	azlD	-	-	S	-	-	-	Branched-chain amino acid transport protein (AzlD)
PNNFFKII_01840	1.89e-293	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
PNNFFKII_01841	1.84e-113	-	-	-	EGP	-	-	-	Transmembrane secretion effector
PNNFFKII_01842	8.47e-136	-	-	-	EGP	-	-	-	Transmembrane secretion effector
PNNFFKII_01843	7.06e-93	-	-	-	-	-	-	-	-
PNNFFKII_01844	9.86e-117	paiA	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
PNNFFKII_01845	7.97e-113	nimA	-	-	S	ko:K07005	-	ko00000	resistance protein
PNNFFKII_01846	1.26e-137	-	-	-	K	ko:K06977	-	ko00000	acetyltransferase
PNNFFKII_01847	2.05e-181	yejC	-	-	S	-	-	-	Protein of unknown function (DUF1003)
PNNFFKII_01848	6.49e-212	yjbO	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PNNFFKII_01849	5.12e-71	-	-	-	S	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	Glycine cleavage H-protein
PNNFFKII_01852	1.46e-114	maa	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose O-acetyltransferase
PNNFFKII_01853	0.0	araA	5.3.1.4	-	G	ko:K01804	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of L-arabinose to L-ribulose
PNNFFKII_01854	5.47e-178	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
PNNFFKII_01855	0.0	araB	2.7.1.16	-	G	ko:K00853	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	carbohydrate kinase FGGY
PNNFFKII_01856	0.0	araP	-	-	U	-	-	-	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PNNFFKII_01857	2.23e-250	araR	-	-	K	ko:K02103	-	ko00000,ko03000	Transcriptional regulator
PNNFFKII_01858	4.67e-116	maa	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
PNNFFKII_01859	4.96e-217	-	-	-	K	-	-	-	transcriptional regulator, ArsR family
PNNFFKII_01860	1.43e-256	abf	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 43 family
PNNFFKII_01861	1.31e-302	lacY	-	-	G	ko:K02532	-	ko00000,ko02000	Oligosaccharide H symporter
PNNFFKII_01862	0.0	abfA	3.2.1.55	GH51	G	ko:K01209	ko00520,map00520	ko00000,ko00001,ko01000	Alpha-L-arabinofuranosidase C-terminus
PNNFFKII_01863	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
PNNFFKII_01864	1.56e-93	-	-	-	K	-	-	-	Transcriptional regulator
PNNFFKII_01865	2.53e-124	-	1.5.1.40	-	S	ko:K06988	-	ko00000,ko01000	NADP oxidoreductase coenzyme F420-dependent
PNNFFKII_01866	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
PNNFFKII_01867	0.0	arcD	-	-	E	ko:K03758	-	ko00000,ko02000	Arginine ornithine antiporter
PNNFFKII_01868	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
PNNFFKII_01869	2.46e-93	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
PNNFFKII_01870	0.0	rafA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
PNNFFKII_01871	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
PNNFFKII_01872	6.78e-136	-	-	-	K	-	-	-	acetyltransferase
PNNFFKII_01873	1.68e-225	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
PNNFFKII_01874	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
PNNFFKII_01875	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
PNNFFKII_01876	3.18e-155	pgm3	-	-	G	-	-	-	phosphoglycerate mutase
PNNFFKII_01877	3.27e-229	oppF	-	-	P	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PNNFFKII_01878	1.24e-259	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PNNFFKII_01879	1.11e-238	oppC	-	-	EP	ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PNNFFKII_01880	7.11e-203	oppB	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PNNFFKII_01881	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
PNNFFKII_01882	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
PNNFFKII_01883	1.19e-296	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PNNFFKII_01884	2.65e-139	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PNNFFKII_01885	1.5e-142	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PNNFFKII_01886	4.49e-195	glnH	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PNNFFKII_01887	8.35e-175	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PNNFFKII_01888	3.24e-220	-	-	-	-	-	-	-	-
PNNFFKII_01889	4.52e-47	-	3.2.1.14	GH18	-	ko:K01183	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	-
PNNFFKII_01890	2.62e-109	zur	-	-	P	ko:K02076,ko:K03711	-	ko00000,ko03000	Belongs to the Fur family
PNNFFKII_01891	1.3e-97	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase
PNNFFKII_01892	4.67e-95	apfA	3.6.1.61	-	F	ko:K18445	ko00230,map00230	ko00000,ko00001,ko01000	Nudix hydrolase
PNNFFKII_01893	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
PNNFFKII_01894	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PNNFFKII_01895	9.02e-228	-	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
PNNFFKII_01896	4.19e-113	yciB	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
PNNFFKII_01897	0.0	-	-	-	S	-	-	-	ABC transporter, ATP-binding protein
PNNFFKII_01898	1.57e-89	-	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PNNFFKII_01899	2.69e-158	XK27_07075	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PNNFFKII_01900	1.14e-155	-	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PNNFFKII_01901	2.84e-215	WQ51_06230	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PNNFFKII_01902	9.9e-216	XK27_00670	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
PNNFFKII_01903	3.6e-210	-	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
PNNFFKII_01904	6.83e-228	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
PNNFFKII_01905	1.27e-196	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PNNFFKII_01906	1.14e-177	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PNNFFKII_01908	4.19e-205	glxR	1.1.1.31	-	I	ko:K00020	ko00280,ko01100,map00280,map01100	ko00000,ko00001,ko01000	Dehydrogenase
PNNFFKII_01909	8.53e-165	-	-	-	P	-	-	-	integral membrane protein, YkoY family
PNNFFKII_01910	1.06e-312	-	3.4.16.4	-	V	ko:K01286	-	ko00000,ko01000	SH3-like domain
PNNFFKII_01911	7.21e-143	acmA	-	-	NU	-	-	-	mannosyl-glycoprotein
PNNFFKII_01912	1.15e-234	-	-	-	S	-	-	-	DUF218 domain
PNNFFKII_01913	2.25e-239	-	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PNNFFKII_01914	2.77e-172	-	1.1.1.304, 1.1.1.76	-	IQ	ko:K03366	ko00650,map00650	ko00000,ko00001,ko01000	reductase
PNNFFKII_01915	2.21e-21	-	-	-	-	-	-	-	-
PNNFFKII_01916	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
PNNFFKII_01917	0.0	ydiC1	-	-	EGP	-	-	-	Major Facilitator
PNNFFKII_01918	3.27e-118	-	-	-	K	-	-	-	Transcriptional regulator PadR-like family
PNNFFKII_01919	1.69e-107	-	-	-	K	-	-	-	MerR family regulatory protein
PNNFFKII_01920	3.35e-89	lytE	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family
PNNFFKII_01921	3.26e-101	yyaT	-	-	K	ko:K02348	-	ko00000	protein acetylation
PNNFFKII_01922	2.32e-159	pgm3	-	-	G	-	-	-	phosphoglycerate mutase family
PNNFFKII_01923	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PNNFFKII_01924	4.49e-233	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
PNNFFKII_01925	1.7e-186	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
PNNFFKII_01926	2.86e-244	-	-	-	S	-	-	-	Protease prsW family
PNNFFKII_01927	1.06e-229	iunH1	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	nucleoside hydrolase
PNNFFKII_01928	6.95e-10	-	-	-	-	-	-	-	-
PNNFFKII_01929	7.94e-126	-	-	-	-	-	-	-	-
PNNFFKII_01930	7.18e-193	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PNNFFKII_01931	6.68e-198	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
PNNFFKII_01932	4.94e-305	-	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PNNFFKII_01933	1.63e-184	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2087)
PNNFFKII_01934	2.38e-80	-	-	-	S	-	-	-	LuxR family transcriptional regulator
PNNFFKII_01935	2.53e-173	cat	2.3.1.28	-	V	ko:K19271	-	br01600,ko00000,ko01000,ko01504	Chloramphenicol acetyltransferase
PNNFFKII_01936	3.71e-281	-	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PNNFFKII_01937	2.96e-216	-	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PNNFFKII_01938	1.8e-124	-	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC transporter permease
PNNFFKII_01939	0.0	-	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
PNNFFKII_01940	1.44e-147	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
PNNFFKII_01941	5.69e-154	tenA	3.5.99.2	-	K	ko:K03707	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03000	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
PNNFFKII_01942	4.78e-79	-	-	-	-	-	-	-	-
PNNFFKII_01943	1.59e-10	-	-	-	-	-	-	-	-
PNNFFKII_01945	3.56e-55	-	-	-	-	-	-	-	-
PNNFFKII_01946	2.69e-276	-	-	-	-	-	-	-	-
PNNFFKII_01947	1.3e-239	ansB	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	Asparaginase
PNNFFKII_01948	9.57e-36	-	-	-	-	-	-	-	-
PNNFFKII_01949	1.82e-316	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
PNNFFKII_01950	2.1e-214	natA	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PNNFFKII_01951	3.11e-271	natB	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PNNFFKII_01953	7.34e-69	-	-	-	K	-	-	-	LytTr DNA-binding domain
PNNFFKII_01954	1.75e-60	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
PNNFFKII_01959	6.34e-195	-	-	-	S	-	-	-	Virulence-associated protein E
PNNFFKII_01960	9.9e-87	-	-	-	L	-	-	-	Primase C terminal 1 (PriCT-1)
PNNFFKII_01961	1.63e-12	-	-	-	-	-	-	-	-
PNNFFKII_01965	1.67e-87	-	-	-	S	-	-	-	Phage regulatory protein Rha (Phage_pRha)
PNNFFKII_01966	1.57e-14	-	-	-	-	-	-	-	-
PNNFFKII_01967	7.91e-22	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
PNNFFKII_01968	4.66e-50	sip	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PNNFFKII_01969	4.34e-100	sip	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PNNFFKII_01970	0.0	-	-	-	S	-	-	-	Putative threonine/serine exporter
PNNFFKII_01971	7.25e-206	yitS	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
PNNFFKII_01972	2.52e-196	-	-	-	C	-	-	-	Aldo keto reductase
PNNFFKII_01973	1.42e-85	-	-	-	S	-	-	-	Protein of unknown function (DUF1722)
PNNFFKII_01974	7.93e-91	yqeB	-	-	S	-	-	-	Pyrimidine dimer DNA glycosylase
PNNFFKII_01975	0.0	gadB	4.1.1.15, 4.1.2.27	-	E	ko:K01580,ko:K01634	ko00250,ko00410,ko00430,ko00600,ko00650,ko01100,ko01110,ko01120,ko02024,ko04071,ko04727,ko04940,map00250,map00410,map00430,map00600,map00650,map01100,map01110,map01120,map02024,map04071,map04727,map04940	ko00000,ko00001,ko00002,ko01000	Belongs to the group II decarboxylase family
PNNFFKII_01976	2.22e-161	rcfB	-	-	K	-	-	-	Crp-like helix-turn-helix domain
PNNFFKII_01977	5.12e-303	larA	5.1.2.1	-	S	ko:K22373	ko00620,map00620	ko00000,ko00001,ko01000	Domain of unknown function (DUF2088)
PNNFFKII_01978	1.37e-172	larB	-	-	S	ko:K06898	-	ko00000	AIR carboxylase
PNNFFKII_01979	2.04e-294	larC	4.99.1.12	-	S	ko:K09121	-	ko00000,ko01000	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
PNNFFKII_01980	8.69e-193	larE	-	-	S	ko:K06864	-	ko00000	NAD synthase
PNNFFKII_01981	2.21e-160	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
PNNFFKII_01982	8.66e-229	-	-	-	U	ko:K07241	-	ko00000,ko02000	High-affinity nickel-transport protein
PNNFFKII_01983	2.9e-53	yfhR3	-	-	S	ko:K06889	-	ko00000	Serine hydrolase (FSH1)
PNNFFKII_01984	1.95e-41	yfhR3	-	-	S	ko:K06889	-	ko00000	Serine hydrolase (FSH1)
PNNFFKII_01985	8.39e-54	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
PNNFFKII_01986	2.01e-267	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PNNFFKII_01987	2.91e-189	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PNNFFKII_01988	2.43e-173	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PNNFFKII_01989	1.15e-259	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PNNFFKII_01990	2.06e-190	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PNNFFKII_01991	6.02e-193	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
PNNFFKII_01992	4.2e-215	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
PNNFFKII_01993	3.04e-202	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
PNNFFKII_01994	6.41e-77	-	-	-	-	-	-	-	-
PNNFFKII_01995	1.35e-42	-	-	-	-	-	-	-	-
PNNFFKII_01996	5.26e-58	-	-	-	-	-	-	-	-
PNNFFKII_01997	0.0	uvrB3	3.1.12.1	-	KL	ko:K07464	-	ko00000,ko01000,ko02048	DEAD_2
PNNFFKII_01998	6.36e-162	-	-	-	-	-	-	-	-
PNNFFKII_01999	2.22e-229	-	-	-	-	-	-	-	-
PNNFFKII_02000	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
PNNFFKII_02001	1.49e-97	-	-	-	L	-	-	-	Transposase DDE domain
PNNFFKII_02002	3.9e-88	-	-	-	L	-	-	-	Putative transposase of IS4/5 family (DUF4096)
PNNFFKII_02003	1.41e-12	-	-	-	V	-	-	-	ABC transporter transmembrane region
PNNFFKII_02004	0.0	-	-	-	KLT	-	-	-	Protein kinase domain
PNNFFKII_02005	2.69e-226	-	-	-	L	ko:K07482	-	ko00000	Integrase core domain
PNNFFKII_02006	2.72e-148	-	-	-	KLT	-	-	-	Protein kinase domain
PNNFFKII_02008	2.9e-253	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
PNNFFKII_02009	1.53e-106	yoaA	-	-	J	-	-	-	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PNNFFKII_02010	0.0	ybeC	-	-	E	-	-	-	amino acid
PNNFFKII_02011	9.21e-153	-	-	-	S	-	-	-	membrane
PNNFFKII_02012	2.09e-146	-	-	-	S	-	-	-	VIT family
PNNFFKII_02013	2.56e-119	perR	-	-	P	ko:K03711,ko:K09825	-	ko00000,ko03000	Belongs to the Fur family
PNNFFKII_02014	1.1e-236	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
PNNFFKII_02016	1.15e-163	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
PNNFFKII_02017	6.13e-258	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
PNNFFKII_02019	2.11e-108	-	-	-	T	-	-	-	Belongs to the universal stress protein A family
PNNFFKII_02020	1.93e-188	-	-	-	-	-	-	-	-
PNNFFKII_02021	1.4e-11	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PNNFFKII_02022	2.64e-114	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PNNFFKII_02023	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
PNNFFKII_02024	3.68e-119	-	-	-	S	-	-	-	Cob(I)alamin adenosyltransferase
PNNFFKII_02025	0.0	rtpR	1.17.4.2	-	F	ko:K00527	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	ribonucleoside-triphosphate reductase activity
PNNFFKII_02026	2.29e-223	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PNNFFKII_02028	3.73e-239	galR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
PNNFFKII_02029	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
PNNFFKII_02030	5.36e-247	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
PNNFFKII_02031	5.28e-283	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PNNFFKII_02032	0.0	lacP	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
PNNFFKII_02033	2.95e-50	-	-	-	-	-	-	-	-
PNNFFKII_02034	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PNNFFKII_02035	2.78e-252	galM1	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
PNNFFKII_02036	2.25e-265	-	1.3.8.1, 1.3.8.7	-	I	ko:K00248,ko:K00249,ko:K18244	ko00071,ko00280,ko00410,ko00640,ko00650,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map00650,map01100,map01110,map01120,map01130,map01200,map01212,map03320	ko00000,ko00001,ko00002,ko01000	Acyl-CoA dehydrogenase, C-terminal domain
PNNFFKII_02037	3.03e-186	fixA	-	-	C	ko:K03521	-	ko00000	Electron transfer flavoprotein domain
PNNFFKII_02038	1.74e-225	etfA	1.3.1.108	-	C	ko:K03522,ko:K22432	-	ko00000,ko01000,ko04147	Electron transfer flavoprotein FAD-binding domain
PNNFFKII_02039	5.72e-239	-	1.1.1.1	-	C	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	nadph quinone reductase
PNNFFKII_02040	6.28e-73	-	-	-	K	-	-	-	Transcriptional
PNNFFKII_02041	8.73e-162	-	-	-	S	-	-	-	DJ-1/PfpI family
PNNFFKII_02042	0.0	-	-	-	EP	-	-	-	Psort location Cytoplasmic, score
PNNFFKII_02043	2.02e-106	-	-	-	S	-	-	-	ASCH
PNNFFKII_02044	0.0	-	-	-	EGP	-	-	-	Major Facilitator
PNNFFKII_02045	8.06e-33	-	-	-	-	-	-	-	-
PNNFFKII_02046	3.31e-195	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
PNNFFKII_02047	4.18e-180	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PNNFFKII_02048	4.89e-202	-	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
PNNFFKII_02049	3.32e-154	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
PNNFFKII_02050	1.01e-91	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
PNNFFKII_02051	3.68e-161	-	-	-	S	-	-	-	HAD-hyrolase-like
PNNFFKII_02052	2.33e-103	-	-	-	T	-	-	-	Universal stress protein family
PNNFFKII_02053	0.0	-	-	-	U	ko:K03451	-	ko00000	Belongs to the BCCT transporter (TC 2.A.15) family
PNNFFKII_02054	3.21e-148	maa	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose O-acetyltransferase
PNNFFKII_02055	6.33e-109	-	-	-	S	ko:K04750	-	ko00000	3-demethylubiquinone-9 3-methyltransferase
PNNFFKII_02056	6.64e-190	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PNNFFKII_02057	1.89e-110	-	-	-	-	-	-	-	-
PNNFFKII_02058	3.08e-306	codA	3.5.4.1	-	F	ko:K01485	ko00240,ko00330,ko01100,map00240,map00330,map01100	ko00000,ko00001,ko01000	cytosine deaminase
PNNFFKII_02059	1.12e-64	-	-	-	-	-	-	-	-
PNNFFKII_02060	9.11e-196	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
PNNFFKII_02061	8.02e-25	-	-	-	-	-	-	-	-
PNNFFKII_02062	6.1e-160	yrkL	-	-	S	-	-	-	Flavodoxin-like fold
PNNFFKII_02064	6.14e-45	-	-	-	-	-	-	-	-
PNNFFKII_02066	3.1e-51	-	-	-	S	-	-	-	Cytochrome B5
PNNFFKII_02067	2.32e-43	cspC	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
PNNFFKII_02068	1.47e-144	mhqD	-	-	S	ko:K06999	-	ko00000	Dienelactone hydrolase family
PNNFFKII_02069	1.52e-68	-	-	-	-	-	-	-	-
PNNFFKII_02070	2.32e-282	mutY	-	-	L	ko:K03575	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	A G-specific adenine glycosylase
PNNFFKII_02071	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
PNNFFKII_02072	0.0	-	-	-	M	-	-	-	domain, Protein
PNNFFKII_02073	2.56e-70	-	-	-	-	-	-	-	-
PNNFFKII_02074	3.24e-250	-	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Lipoate-protein ligase
PNNFFKII_02075	3.46e-87	-	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	glycine cleavage
PNNFFKII_02076	2.07e-236	tas	-	-	C	-	-	-	Aldo/keto reductase family
PNNFFKII_02077	1.49e-43	-	-	-	-	-	-	-	-
PNNFFKII_02078	2.62e-89	-	-	-	L	ko:K07483,ko:K07497	-	ko00000	Helix-turn-helix domain
PNNFFKII_02079	3.07e-143	-	-	-	L	ko:K07497	-	ko00000	PFAM Integrase catalytic region
PNNFFKII_02080	1.27e-226	-	-	-	EG	-	-	-	EamA-like transporter family
PNNFFKII_02081	2.02e-147	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
PNNFFKII_02082	1.87e-248	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PNNFFKII_02083	2.8e-188	-	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
PNNFFKII_02084	9.75e-131	tag2	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
PNNFFKII_02085	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
PNNFFKII_02087	0.0	-	3.2.1.21, 3.2.1.52	GH3	G	ko:K01207,ko:K05349	ko00460,ko00500,ko00520,ko00531,ko00940,ko01100,ko01110,ko01501,map00460,map00500,map00520,map00531,map00940,map01100,map01110,map01501	ko00000,ko00001,ko00002,ko01000	hydrolase, family 3
PNNFFKII_02088	2.44e-244	pva2	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolases, choloylglycine hydrolase family
PNNFFKII_02089	0.0	sbcC	-	-	L	ko:K03546	-	ko00000,ko03400	Putative exonuclease SbcCD, C subunit
PNNFFKII_02090	1.72e-267	sbcD	-	-	L	ko:K03547	-	ko00000,ko03400	SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PNNFFKII_02091	2.12e-136	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
PNNFFKII_02092	1.11e-192	-	-	-	S	-	-	-	Zinc-dependent metalloprotease
PNNFFKII_02093	6.44e-214	-	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	hydrolase, family 25
PNNFFKII_02094	1.25e-263	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
PNNFFKII_02095	1.64e-72	yphJ	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	decarboxylase
PNNFFKII_02096	2.3e-104	yphH	-	-	S	-	-	-	Cupin domain
PNNFFKII_02097	2.69e-226	-	-	-	L	ko:K07482	-	ko00000	Integrase core domain
PNNFFKII_02098	2.05e-99	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PNNFFKII_02099	5.81e-131	yobS	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PNNFFKII_02101	4.47e-295	-	-	-	-	-	-	-	-
PNNFFKII_02102	2.63e-204	dkgB	-	-	S	-	-	-	reductase
PNNFFKII_02103	9.4e-260	-	-	-	EGP	-	-	-	Major Facilitator
PNNFFKII_02104	1.91e-263	-	-	-	EGP	-	-	-	Major Facilitator
PNNFFKII_02105	9.3e-166	namA	-	-	C	-	-	-	Oxidoreductase
PNNFFKII_02106	2.6e-54	pduN	-	-	CQ	ko:K04028	-	ko00000	Ethanolamine utilisation protein EutN/carboxysome
PNNFFKII_02107	7.79e-71	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PNNFFKII_02108	1.01e-293	-	-	-	L	-	-	-	Transposase
PNNFFKII_02109	1.94e-89	-	-	-	S	-	-	-	Domain of unknown function (DUF4430)
PNNFFKII_02110	1.43e-229	-	-	-	U	-	-	-	FFAT motif binding
PNNFFKII_02111	8.08e-147	-	-	-	S	ko:K16927	-	ko00000,ko00002,ko02000	ECF-type riboflavin transporter, S component
PNNFFKII_02112	0.0	-	-	-	S	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
PNNFFKII_02113	3.16e-204	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-type cobalt transport system permease component CbiQ and related transporters
PNNFFKII_02114	7.84e-92	-	-	-	-	-	-	-	-
PNNFFKII_02115	7.62e-126	ubiX	2.5.1.129	-	H	ko:K03186	ko00130,ko00627,ko00940,ko01100,ko01110,ko01120,ko01220,map00130,map00627,map00940,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
PNNFFKII_02116	0.0	yclC	4.1.1.61, 4.1.1.98	-	H	ko:K01612,ko:K03182,ko:K16874	ko00130,ko00365,ko00627,ko01100,ko01110,ko01120,ko01220,map00130,map00365,map00627,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
PNNFFKII_02117	9.15e-207	-	-	-	K	-	-	-	LysR substrate binding domain
PNNFFKII_02118	9.53e-93	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
PNNFFKII_02119	0.0	epsA	-	-	I	-	-	-	PAP2 superfamily
PNNFFKII_02120	5.98e-72	-	-	-	S	-	-	-	Domain of unknown function (DU1801)
PNNFFKII_02121	8.65e-144	aqpZ	-	-	U	ko:K06188	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
PNNFFKII_02122	2.69e-226	-	-	-	L	ko:K07482	-	ko00000	Integrase core domain
PNNFFKII_02123	1.35e-141	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PNNFFKII_02124	0.0	lmrA	3.6.3.44	-	V	ko:K02021,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter
PNNFFKII_02125	1.02e-125	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
PNNFFKII_02126	2.36e-156	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
PNNFFKII_02127	1.81e-178	-	-	-	T	-	-	-	Tyrosine phosphatase family
PNNFFKII_02128	2.51e-158	-	-	-	-	-	-	-	-
PNNFFKII_02129	6.81e-160	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PNNFFKII_02130	2.63e-82	lexA	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator, GntR family
PNNFFKII_02131	7.14e-229	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
PNNFFKII_02132	1.9e-109	gpo	1.11.1.9	-	O	ko:K00432	ko00480,ko00590,ko04918,map00480,map00590,map04918	ko00000,ko00001,ko01000	Belongs to the glutathione peroxidase family
PNNFFKII_02133	2.23e-261	-	-	-	EGP	ko:K02030,ko:K07552	-	ko00000,ko00002,ko02000	Drug resistance transporter Bcr CflA subfamily
PNNFFKII_02134	3.03e-188	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PNNFFKII_02135	7.26e-202	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
PNNFFKII_02136	2.96e-147	-	-	-	-	-	-	-	-
PNNFFKII_02138	5.65e-171	-	-	-	S	-	-	-	KR domain
PNNFFKII_02139	1.8e-87	-	-	-	K	-	-	-	HxlR-like helix-turn-helix
PNNFFKII_02140	5.5e-83	asp2	-	-	S	-	-	-	Asp23 family, cell envelope-related function
PNNFFKII_02141	4.16e-93	-	-	-	S	-	-	-	Asp23 family, cell envelope-related function
PNNFFKII_02142	1.02e-34	-	-	-	-	-	-	-	-
PNNFFKII_02143	1.23e-119	-	-	-	-	-	-	-	-
PNNFFKII_02144	4.98e-44	-	-	-	S	-	-	-	Transglycosylase associated protein
PNNFFKII_02145	4.84e-203	-	-	-	-	-	-	-	-
PNNFFKII_02146	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
PNNFFKII_02147	8.84e-171	-	-	-	U	-	-	-	Major Facilitator Superfamily
PNNFFKII_02148	5.1e-45	chaT1	-	-	U	ko:K03446	-	ko00000,ko00002,ko02000	the major facilitator superfamily
PNNFFKII_02149	2.56e-123	laaE	-	-	K	-	-	-	Transcriptional regulator PadR-like family
PNNFFKII_02150	1.6e-85	lysM	-	-	M	-	-	-	LysM domain
PNNFFKII_02151	2.58e-165	XK27_07210	-	-	S	-	-	-	B3 4 domain
PNNFFKII_02152	4.82e-155	-	-	-	K	ko:K10914,ko:K21828	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	Cyclic nucleotide-monophosphate binding domain
PNNFFKII_02153	1.27e-219	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
PNNFFKII_02154	1.09e-275	arcT	-	-	E	-	-	-	Aminotransferase
PNNFFKII_02155	0.0	arcD	-	-	E	ko:K03758	-	ko00000,ko02000	Arginine ornithine antiporter
PNNFFKII_02156	2.48e-252	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PNNFFKII_02157	1.15e-300	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
PNNFFKII_02158	0.0	-	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
PNNFFKII_02159	1.45e-296	ycbA	2.7.13.3	-	T	ko:K07706,ko:K07717	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	histidine kinase DNA gyrase B
PNNFFKII_02160	1.23e-191	-	-	-	KT	ko:K07719	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	YcbB domain
PNNFFKII_02161	0.0	arcD	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
PNNFFKII_02162	0.0	arcT	-	-	E	-	-	-	Dipeptidase
PNNFFKII_02164	2.74e-265	-	-	-	-	-	-	-	-
PNNFFKII_02165	1.58e-138	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
PNNFFKII_02166	8.12e-213	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
PNNFFKII_02167	3.28e-283	-	-	-	U	-	-	-	Belongs to the major facilitator superfamily
PNNFFKII_02168	5.32e-53	-	-	-	S	-	-	-	Protein of unknown function (DUF3781)
PNNFFKII_02169	4.28e-53	-	-	-	-	-	-	-	-
PNNFFKII_02170	1.43e-111	yafP	-	-	K	ko:K03830	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
PNNFFKII_02171	3.05e-169	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PNNFFKII_02172	0.0	-	-	-	M	-	-	-	domain protein
PNNFFKII_02173	1.01e-236	ydbI	-	-	K	-	-	-	AI-2E family transporter
PNNFFKII_02174	9.22e-272	xylR	-	-	GK	-	-	-	ROK family
PNNFFKII_02175	4.7e-177	-	-	-	-	-	-	-	-
PNNFFKII_02176	2.81e-303	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
PNNFFKII_02177	1.3e-71	-	-	-	S	-	-	-	branched-chain amino acid
PNNFFKII_02178	2.86e-176	azlC	-	-	E	-	-	-	AzlC protein
PNNFFKII_02179	7.91e-115	ywnH	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	Acetyltransferase (GNAT) domain
PNNFFKII_02180	0.0	gshR3	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Glutathione reductase
PNNFFKII_02181	1.72e-41	-	-	-	S	ko:K21449	-	ko00000,ko02000	Domain of unknown function (DUF4430)
PNNFFKII_02182	0.0	yhgE	-	-	V	ko:K01421	-	ko00000	domain protein
PNNFFKII_02183	2.55e-305	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PNNFFKII_02184	1.68e-275	hpk31	-	-	T	-	-	-	Histidine kinase
PNNFFKII_02185	4.64e-159	vanR	-	-	K	-	-	-	response regulator
PNNFFKII_02186	4.95e-268	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PNNFFKII_02187	7.6e-139	-	-	-	-	-	-	-	-
PNNFFKII_02188	2.48e-170	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
PNNFFKII_02189	2.3e-255	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PNNFFKII_02190	1.15e-43	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
PNNFFKII_02191	1.44e-199	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
PNNFFKII_02192	3.52e-176	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
PNNFFKII_02193	5.86e-191	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
PNNFFKII_02194	9.37e-170	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
PNNFFKII_02195	1.3e-209	-	3.1.4.17, 3.1.4.53	-	S	ko:K01120,ko:K03651	ko00230,ko02025,map00230,map02025	ko00000,ko00001,ko01000	Calcineurin-like phosphoesterase
PNNFFKII_02196	5.58e-218	rihA	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
PNNFFKII_02197	2.59e-281	pbuO_1	-	-	S	ko:K06901	-	ko00000,ko02000	Permease family
PNNFFKII_02198	1.04e-287	nupG	-	-	F	ko:K16323	-	ko00000,ko02000	Nucleoside
PNNFFKII_02199	1.25e-199	-	5.4.2.7	-	G	ko:K01839	ko00030,ko00230,map00030,map00230	ko00000,ko00001,ko01000	Metalloenzyme superfamily
PNNFFKII_02200	4.32e-147	-	-	-	GM	-	-	-	NmrA-like family
PNNFFKII_02201	2.39e-59	-	-	-	-	-	-	-	-
PNNFFKII_02202	5.3e-124	-	-	-	-	-	-	-	-
PNNFFKII_02203	3.48e-53	-	-	-	-	-	-	-	-
PNNFFKII_02204	2.61e-83	-	-	-	K	-	-	-	HxlR-like helix-turn-helix
PNNFFKII_02206	1.29e-148	-	-	-	-	-	-	-	-
PNNFFKII_02207	0.0	-	-	-	-	-	-	-	-
PNNFFKII_02208	1.74e-130	-	-	-	-	-	-	-	-
PNNFFKII_02209	3.82e-127	-	3.2.1.23, 3.2.1.89	-	G	ko:K01190,ko:K01224	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	arabinogalactan endo-1,4-beta-galactosidase activity
PNNFFKII_02210	4.16e-75	-	-	-	EK	-	-	-	Aminotransferase, class I
PNNFFKII_02211	2.15e-180	-	-	-	EK	-	-	-	Aminotransferase, class I
PNNFFKII_02212	9.92e-211	-	-	-	K	-	-	-	LysR substrate binding domain
PNNFFKII_02214	4.01e-36	-	-	-	-	-	-	-	-
PNNFFKII_02215	6.58e-130	-	-	-	K	-	-	-	DNA-templated transcription, initiation
PNNFFKII_02216	1e-76	-	-	-	L	ko:K07483,ko:K09936	ko02024,map02024	ko00000,ko00001,ko02000	Helix-turn-helix domain
PNNFFKII_02217	9.75e-132	-	-	-	L	-	-	-	PFAM Integrase catalytic region
PNNFFKII_02218	4.85e-258	-	-	-	-	-	-	-	-
PNNFFKII_02219	4.16e-85	-	-	-	-	-	-	-	-
PNNFFKII_02220	7.36e-74	-	-	-	-	-	-	-	-
PNNFFKII_02221	9.89e-246	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
PNNFFKII_02222	5.62e-267	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PNNFFKII_02223	1.23e-68	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PNNFFKII_02224	3.12e-142	thiE	2.5.1.3	-	H	ko:K00788	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PNNFFKII_02225	1.38e-188	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
PNNFFKII_02226	3.12e-178	thiM	2.7.1.50	-	H	ko:K00878	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PNNFFKII_02227	8.69e-193	yneD	-	-	S	-	-	-	Enoyl-(Acyl carrier protein) reductase
PNNFFKII_02228	3.21e-166	yjkA	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
PNNFFKII_02229	1.24e-152	ybbL	-	-	S	ko:K02068	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PNNFFKII_02230	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PNNFFKII_02231	7.04e-118	-	-	-	-	-	-	-	-
PNNFFKII_02236	7.81e-43	-	-	-	-	-	-	-	-
PNNFFKII_02238	3.1e-213	-	-	-	L	-	-	-	Transposase
PNNFFKII_02240	2.07e-207	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_02241	6.05e-36	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PNNFFKII_02242	1e-112	rmeB	-	-	K	-	-	-	transcriptional regulator, MerR family
PNNFFKII_02243	1.65e-122	-	-	-	J	-	-	-	glyoxalase III activity
PNNFFKII_02244	2.4e-177	XK27_00890	-	-	S	ko:K08974	-	ko00000	Domain of unknown function (DUF368)
PNNFFKII_02245	7.74e-173	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PNNFFKII_02246	6.97e-284	xylR	-	-	GK	-	-	-	ROK family
PNNFFKII_02247	4.04e-204	-	-	-	C	-	-	-	Aldo keto reductase
PNNFFKII_02248	5.68e-316	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
PNNFFKII_02249	0.0	cpdB	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
PNNFFKII_02250	1.9e-164	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
PNNFFKII_02251	7.12e-226	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
PNNFFKII_02252	0.0	pepF2	-	-	E	-	-	-	Oligopeptidase F
PNNFFKII_02253	9.09e-97	-	-	-	K	-	-	-	Transcriptional regulator
PNNFFKII_02254	1.86e-210	-	-	-	-	-	-	-	-
PNNFFKII_02255	7.7e-254	-	-	-	S	-	-	-	DUF218 domain
PNNFFKII_02256	0.0	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
PNNFFKII_02257	2.82e-203	nanK	-	-	GK	-	-	-	ROK family
PNNFFKII_02258	0.0	-	-	-	E	-	-	-	Amino acid permease
PNNFFKII_02259	0.0	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
PNNFFKII_02260	4.26e-23	-	-	-	S	-	-	-	SEC-C Motif Domain Protein
PNNFFKII_02261	6.65e-269	-	-	-	S	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
PNNFFKII_02263	8.74e-69	-	-	-	-	-	-	-	-
PNNFFKII_02264	1.93e-101	-	-	-	K	ko:K06075	-	ko00000,ko03000	Winged helix DNA-binding domain
PNNFFKII_02265	5.64e-144	nnrE	5.1.99.6	-	H	ko:K17759	-	ko00000,ko01000	Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX
PNNFFKII_02266	7.67e-135	aad	3.4.13.22	-	E	ko:K08641	ko01502,ko02020,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
PNNFFKII_02267	5.95e-147	-	-	-	-	-	-	-	-
PNNFFKII_02268	4e-234	yxeI	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PNNFFKII_02269	1.34e-109	lytE	-	-	M	-	-	-	NlpC P60 family
PNNFFKII_02270	3.28e-260	-	-	-	L	-	-	-	Transposase
PNNFFKII_02271	1.61e-223	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PNNFFKII_02272	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
PNNFFKII_02273	6.31e-79	-	-	-	K	-	-	-	Helix-turn-helix domain
PNNFFKII_02274	0.0	-	3.4.19.1	-	E	ko:K01303	-	ko00000,ko01000,ko01002	Prolyl oligopeptidase family
PNNFFKII_02275	1.66e-217	panE	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PNNFFKII_02276	7.46e-59	-	-	-	-	-	-	-	-
PNNFFKII_02277	2.69e-226	-	-	-	L	ko:K07482	-	ko00000	Integrase core domain
PNNFFKII_02278	1.48e-85	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PNNFFKII_02279	0.0	nhaP2	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
PNNFFKII_02280	0.0	yfkN	3.1.3.6, 3.1.4.16	-	F	ko:K01119	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PNNFFKII_02281	0.0	astA	2.8.2.22	-	M	ko:K01023	-	ko00000,ko01000	Arylsulfotransferase Ig-like domain
PNNFFKII_02282	1.27e-150	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
PNNFFKII_02283	5.85e-199	rihA	-	-	F	ko:K01250	-	ko00000,ko01000	Inosine-uridine preferring nucleoside hydrolase
PNNFFKII_02285	7.41e-229	-	-	-	K	ko:K02529,ko:K03435	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PNNFFKII_02286	2.51e-09	-	-	-	S	-	-	-	Pentapeptide repeats (8 copies)
PNNFFKII_02287	2.83e-32	-	-	-	S	-	-	-	Pentapeptide repeats (8 copies)
PNNFFKII_02288	3.12e-129	ywlG	-	-	S	-	-	-	Belongs to the UPF0340 family
PNNFFKII_02289	5.54e-111	hmpT	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
PNNFFKII_02290	6.56e-181	thiD	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
PNNFFKII_02291	0.0	norG_2	-	-	K	-	-	-	Aminotransferase class I and II
PNNFFKII_02292	2.16e-286	ywtF_2	-	-	K	-	-	-	Cell envelope-related transcriptional attenuator domain
PNNFFKII_02293	6.08e-179	-	-	-	P	ko:K02049	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
PNNFFKII_02294	2.72e-188	-	-	-	P	ko:K02050	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PNNFFKII_02295	6.03e-204	-	-	-	P	ko:K02050	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PNNFFKII_02296	1.5e-50	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Cell cycle protein
PNNFFKII_02297	3.96e-225	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_02298	1.76e-226	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Cell cycle protein
PNNFFKII_02299	7.67e-124	-	-	-	-	-	-	-	-
PNNFFKII_02301	4.28e-93	-	4.4.1.5	-	E	ko:K01759	ko00620,map00620	ko00000,ko00001,ko01000	Glyoxalase
PNNFFKII_02302	6.12e-184	-	-	-	S	-	-	-	Membrane
PNNFFKII_02303	8.46e-239	tdh	1.1.1.14	-	C	ko:K00008	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko00002,ko01000	Zinc-binding dehydrogenase
PNNFFKII_02304	1.81e-221	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
PNNFFKII_02305	3.55e-99	-	-	-	-	-	-	-	-
PNNFFKII_02306	2.25e-260	gldA	1.1.1.6	-	C	ko:K00005	ko00561,ko00640,ko01100,map00561,map00640,map01100	ko00000,ko00001,ko01000	dehydrogenase
PNNFFKII_02307	6.92e-73	ykkC	-	-	P	ko:K18924	-	ko00000,ko00002,ko02000	Small Multidrug Resistance protein
PNNFFKII_02308	2.19e-67	ykkD	-	-	P	ko:K18925	-	ko00000,ko00002,ko02000	Multidrug resistance protein
PNNFFKII_02309	8.42e-138	yokL3	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PNNFFKII_02310	8.63e-188	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
PNNFFKII_02312	0.0	treP	2.4.1.64	GH65	G	ko:K05342	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
PNNFFKII_02313	3.37e-249	-	-	-	I	-	-	-	alpha/beta hydrolase fold
PNNFFKII_02314	0.0	xylP2	-	-	G	-	-	-	symporter
PNNFFKII_02316	4.23e-21	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
PNNFFKII_02317	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
PNNFFKII_02318	2.96e-106	-	-	-	-	-	-	-	-
PNNFFKII_02320	7.38e-228	cytR	-	-	K	ko:K02529,ko:K03604	-	ko00000,ko03000	Transcriptional regulator, LacI family
PNNFFKII_02321	0.0	-	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
PNNFFKII_02322	0.0	-	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
PNNFFKII_02323	2.41e-150	-	-	-	-	-	-	-	-
PNNFFKII_02324	9.42e-95	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PNNFFKII_02326	8.19e-287	-	-	-	C	-	-	-	Oxidoreductase
PNNFFKII_02328	5.89e-90	-	-	-	K	-	-	-	Transcriptional regulator, HxlR family
PNNFFKII_02329	4.07e-271	mccF	-	-	V	-	-	-	LD-carboxypeptidase
PNNFFKII_02330	6.88e-229	-	3.2.2.1, 3.2.2.8	-	F	ko:K01239,ko:K10213	ko00230,ko00240,ko00760,ko01100,map00230,map00240,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
PNNFFKII_02331	6.64e-162	-	-	-	K	ko:K16326	-	ko00000,ko03000	Cyclic nucleotide-monophosphate binding domain
PNNFFKII_02332	6.25e-221	yeaB	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PNNFFKII_02333	1.64e-283	dhaT	1.1.1.202	-	C	ko:K00086	ko00561,ko00640,map00561,map00640	ko00000,ko00001,ko01000	Dehydrogenase
PNNFFKII_02334	6.94e-175	-	3.8.1.2	-	S	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
PNNFFKII_02335	1.47e-157	-	-	-	S	ko:K15770	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	GyrI-like small molecule binding domain
PNNFFKII_02336	6.84e-90	-	-	-	S	-	-	-	Protein of unknown function (DUF1398)
PNNFFKII_02337	1.19e-129	-	-	-	S	ko:K06910	-	ko00000	Phosphatidylethanolamine-binding protein
PNNFFKII_02338	2.68e-287	-	-	-	U	-	-	-	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PNNFFKII_02339	5.66e-159	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PNNFFKII_02340	7.99e-233	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
PNNFFKII_02341	8.39e-114	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PNNFFKII_02342	7.39e-274	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PNNFFKII_02343	1.93e-108	thiW	-	-	S	-	-	-	Thiamine-precursor transporter protein (ThiW)
PNNFFKII_02344	4.7e-215	mleP2	-	-	S	ko:K07088	-	ko00000	Sodium Bile acid symporter family
PNNFFKII_02345	0.0	mleS	1.1.1.38, 4.1.1.101	-	C	ko:K00027,ko:K22212	ko00620,ko01120,ko01200,ko02020,map00620,map01120,map01200,map02020	ko00000,ko00001,ko01000	Malic enzyme
PNNFFKII_02346	3.19e-208	mleR	-	-	K	-	-	-	LysR family
PNNFFKII_02347	5.9e-191	-	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
PNNFFKII_02348	1.01e-276	aguA2	3.5.3.12	-	E	ko:K10536	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko01000	agmatine deiminase
PNNFFKII_02349	2.85e-216	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
PNNFFKII_02350	8.96e-277	aguA	3.5.3.12	-	E	ko:K10536	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko01000	agmatine deiminase
PNNFFKII_02351	1.81e-307	aguD	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	Amino Acid
PNNFFKII_02352	6.83e-252	ptcA	2.1.3.6	-	E	ko:K13252	-	ko00000,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PNNFFKII_02353	4.46e-311	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
PNNFFKII_02354	0.0	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	Amino acid permease
PNNFFKII_02355	0.0	tdc	4.1.1.25	-	E	ko:K22330	ko00350,map00350	ko00000,ko00001,ko01000	Pyridoxal-dependent decarboxylase conserved domain
PNNFFKII_02356	2.44e-306	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PNNFFKII_02357	3.28e-52	-	-	-	-	-	-	-	-
PNNFFKII_02360	2.17e-267	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
PNNFFKII_02361	2.63e-36	-	-	-	-	-	-	-	-
PNNFFKII_02362	6.14e-202	-	-	-	EG	-	-	-	EamA-like transporter family
PNNFFKII_02363	0.0	abfA	3.2.1.55	GH51	G	ko:K01209	ko00520,map00520	ko00000,ko00001,ko01000	Alpha-L-arabinofuranosidase C-terminus
PNNFFKII_02364	2.5e-52	-	-	-	-	-	-	-	-
PNNFFKII_02365	7.18e-43	-	-	-	S	-	-	-	Transglycosylase associated protein
PNNFFKII_02366	4.68e-09	-	-	-	S	-	-	-	Protein of unknown function (DUF2992)
PNNFFKII_02367	1.51e-202	-	-	-	K	-	-	-	Transcriptional regulator
PNNFFKII_02368	0.0	-	3.2.1.45	GH30	G	ko:K01201	ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142	ko00000,ko00001,ko01000	Glycosyl hydrolase family 30 TIM-barrel domain
PNNFFKII_02369	1.52e-36	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNNFFKII_02370	8.61e-12	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PNNFFKII_02373	3.69e-178	XK27_08125	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
PNNFFKII_02374	8.43e-144	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PNNFFKII_02375	6.75e-157	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PNNFFKII_02376	1.1e-276	-	-	-	EGP	ko:K08196	-	ko00000,ko02000	Major Facilitator
PNNFFKII_02377	1.1e-171	-	-	-	S	-	-	-	Protein of unknown function
PNNFFKII_02378	1.49e-224	pepI	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
PNNFFKII_02379	3.75e-210	-	-	-	G	-	-	-	Belongs to the carbohydrate kinase PfkB family
PNNFFKII_02380	0.0	-	-	-	F	ko:K03457	-	ko00000	Belongs to the purine-cytosine permease (2.A.39) family
PNNFFKII_02381	1.41e-242	-	-	-	O	-	-	-	ADP-ribosylglycohydrolase
PNNFFKII_02382	2.48e-159	-	-	-	K	-	-	-	UTRA
PNNFFKII_02383	4.57e-201	yhaZ	-	-	L	-	-	-	DNA alkylation repair enzyme
PNNFFKII_02384	3.29e-161	-	-	-	F	-	-	-	glutamine amidotransferase
PNNFFKII_02385	0.0	fusA1	-	-	J	-	-	-	elongation factor G
PNNFFKII_02386	1.06e-297	-	-	-	EK	-	-	-	Aminotransferase, class I
PNNFFKII_02387	2.89e-175	-	1.1.1.53	-	IQ	ko:K00038	ko00140,ko01100,map00140,map01100	ko00000,ko00001,ko01000	reductase
PNNFFKII_02388	1.39e-128	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PNNFFKII_02389	9.85e-96	-	-	-	S	-	-	-	COG NOG18757 non supervised orthologous group
PNNFFKII_02390	1.92e-264	pmrB	-	-	EGP	-	-	-	Major Facilitator Superfamily
PNNFFKII_02391	7.42e-150	lacA	2.3.1.18, 2.3.1.79	-	S	ko:K00633,ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
PNNFFKII_02392	2.4e-102	-	-	-	-	-	-	-	-
PNNFFKII_02393	4.83e-31	-	-	-	-	-	-	-	-
PNNFFKII_02394	1.11e-153	cah	4.2.1.1	-	P	ko:K01674	ko00910,map00910	ko00000,ko00001,ko01000	Eukaryotic-type carbonic anhydrase
PNNFFKII_02395	3.88e-285	-	-	-	LO	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
PNNFFKII_02396	1.72e-36	-	-	-	K	ko:K07729	-	ko00000,ko03000	Transcriptional
PNNFFKII_02397	6.68e-86	-	-	-	-	-	-	-	-
PNNFFKII_02398	0.0	-	-	-	M	-	-	-	MucBP domain
PNNFFKII_02399	7.02e-146	azo1	1.5.1.36, 1.7.1.6	-	S	ko:K03206,ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
PNNFFKII_02400	2.69e-226	-	-	-	L	ko:K07482	-	ko00000	Integrase core domain
PNNFFKII_02401	0.0	-	-	-	L	ko:K07487	-	ko00000	Transposase
PNNFFKII_02402	1.67e-182	-	-	-	U	ko:K10119	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PNNFFKII_02403	5.87e-194	-	-	-	U	ko:K10118	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PNNFFKII_02404	1.4e-217	-	-	-	G	ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PNNFFKII_02405	2.69e-226	-	-	-	L	ko:K07482	-	ko00000	Integrase core domain
PNNFFKII_02406	5.75e-74	-	-	-	G	ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PNNFFKII_02407	2.29e-273	msmK2	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PNNFFKII_02408	9.12e-237	lacM	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
PNNFFKII_02409	0.0	lacL	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
PNNFFKII_02410	1.49e-93	ywnA	-	-	K	-	-	-	Transcriptional regulator
PNNFFKII_02411	3.09e-120	qorB	1.6.5.2	-	GM	ko:K19267	ko00130,ko01110,map00130,map01110	ko00000,ko00001,ko01000	NmrA-like family
PNNFFKII_02412	6.09e-277	-	-	-	M	-	-	-	domain protein
PNNFFKII_02413	5.44e-99	-	-	-	M	-	-	-	domain protein
PNNFFKII_02415	5.05e-184	-	-	-	K	-	-	-	Helix-turn-helix domain
PNNFFKII_02416	3.48e-215	-	-	-	-	-	-	-	-
PNNFFKII_02417	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
PNNFFKII_02418	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PNNFFKII_02419	3.82e-277	-	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
PNNFFKII_02420	1.35e-237	pgdA	3.5.1.104	-	G	ko:K22278	-	ko00000,ko01000	polysaccharide deacetylase
PNNFFKII_02421	3.66e-77	-	-	-	-	-	-	-	-
PNNFFKII_02422	1.58e-133	-	-	-	GM	-	-	-	NAD(P)H-binding
PNNFFKII_02423	4e-234	iolS	-	-	C	ko:K06607	-	ko00000,ko01000	Aldo keto reductase
PNNFFKII_02424	2.46e-290	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
PNNFFKII_02425	8.73e-122	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PNNFFKII_02426	9.75e-137	drrB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 type transporter
PNNFFKII_02427	1.31e-216	-	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	UbiA prenyltransferase family
PNNFFKII_02428	0.0	yfhO	-	-	S	-	-	-	Bacterial membrane protein YfhO
PNNFFKII_02429	9.8e-113	ccl	-	-	S	-	-	-	QueT transporter
PNNFFKII_02433	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2207)
PNNFFKII_02434	0.0	xynB	3.2.1.37	GH43	G	ko:K01198	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
PNNFFKII_02435	0.0	-	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
PNNFFKII_02436	1.04e-216	rhaS2	-	-	K	-	-	-	Transcriptional regulator, AraC family
PNNFFKII_02437	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PNNFFKII_02438	2.12e-30	-	-	-	-	-	-	-	-
PNNFFKII_02439	5.9e-194	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
PNNFFKII_02440	8.3e-117	-	-	-	-	-	-	-	-
PNNFFKII_02443	1.06e-68	-	-	-	-	-	-	-	-
PNNFFKII_02444	1.34e-146	nt5e	3.1.3.18	-	L	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	haloacid dehalogenase-like hydrolase
PNNFFKII_02445	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
PNNFFKII_02446	7.46e-101	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PNNFFKII_02447	3.92e-141	sip3	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PNNFFKII_02448	1.9e-278	tcaB	-	-	EGP	ko:K07552	-	ko00000,ko02000	Drug resistance transporter Bcr CflA subfamily
PNNFFKII_02449	5.8e-290	-	-	-	S	-	-	-	module of peptide synthetase
PNNFFKII_02450	2.51e-120	ykhA	3.1.2.20	-	I	ko:K01073	-	ko00000,ko01000	Thioesterase superfamily
PNNFFKII_02451	4.33e-127	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PNNFFKII_02452	1.29e-149	-	-	-	S	ko:K07118	-	ko00000	NAD(P)H-binding
PNNFFKII_02453	8.07e-314	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
PNNFFKII_02454	5.5e-51	-	-	-	-	-	-	-	-
PNNFFKII_02455	1.76e-162	yfnB	3.8.1.2	-	S	ko:K01560,ko:K07025	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	HAD-hyrolase-like
PNNFFKII_02456	1.18e-50	-	-	-	-	-	-	-	-
PNNFFKII_02457	1.89e-82	-	-	-	-	-	-	-	-
PNNFFKII_02458	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PNNFFKII_02459	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PNNFFKII_02460	2.25e-149	jag	-	-	S	ko:K06346	-	ko00000	R3H domain protein
PNNFFKII_02461	1.67e-185	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PNNFFKII_02462	9.04e-78	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PNNFFKII_02463	1.61e-20	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
PNNFFKII_02464	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PNNFFKII_02467	2.58e-42	-	-	-	L	-	-	-	Transposase
PNNFFKII_02468	8.94e-178	butA	1.1.1.304, 1.1.1.76	-	IQ	ko:K03366	ko00650,map00650	ko00000,ko00001,ko01000	reductase
PNNFFKII_02469	3.78e-60	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
PNNFFKII_02479	1.27e-42	-	-	-	S	-	-	-	Protein of unknown function (DUF3102)
PNNFFKII_02480	1.67e-131	repE	-	-	K	-	-	-	Primase C terminal 1 (PriCT-1)
PNNFFKII_02481	4.24e-122	-	-	-	D	-	-	-	Cellulose biosynthesis protein BcsQ
PNNFFKII_02482	5.45e-61	-	-	-	-	-	-	-	-
PNNFFKII_02484	8.81e-72	-	-	-	L	-	-	-	recombinase activity
PNNFFKII_02485	3.96e-225	-	-	-	L	ko:K07482	-	ko00000	Transposase and inactivated derivatives, IS30 family
PNNFFKII_02486	4.74e-23	-	-	-	-	-	-	-	-
PNNFFKII_02487	3.42e-41	-	-	-	S	-	-	-	Transglycosylase associated protein
PNNFFKII_02488	3.68e-100	-	-	-	S	-	-	-	cog cog1302
PNNFFKII_02489	3.69e-33	-	-	-	S	-	-	-	Small integral membrane protein (DUF2273)
PNNFFKII_02490	7.82e-114	-	-	-	-	-	-	-	-
PNNFFKII_02491	3.74e-53	-	-	-	-	-	-	-	-
PNNFFKII_02492	7.37e-54	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PNNFFKII_02493	1.45e-14	-	-	-	-	-	-	-	-
PNNFFKII_02494	2.94e-22	-	-	-	-	-	-	-	-
PNNFFKII_02497	3.69e-127	-	-	-	U	-	-	-	type IV secretory pathway VirB4
PNNFFKII_02503	2.16e-80	is18	-	-	L	-	-	-	Integrase core domain
PNNFFKII_02504	3.81e-106	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
PNNFFKII_02505	3.97e-69	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
PNNFFKII_02506	2.86e-08	-	-	-	S	-	-	-	PFAM EamA-like transporter family
PNNFFKII_02507	1.14e-183	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_02508	8.08e-110	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
PNNFFKII_02509	2.85e-78	-	-	-	K	ko:K03489	-	ko00000,ko03000	UTRA
PNNFFKII_02510	3.38e-70	bglA	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PNNFFKII_02511	2.67e-182	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_02512	1.43e-86	-	-	-	L	-	-	-	Resolvase, N terminal domain
PNNFFKII_02513	0.0	trePP	2.4.1.216, 2.4.1.8	GH65	G	ko:K00691,ko:K03731	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Glycosyl hydrolase family 65 central catalytic domain
PNNFFKII_02514	1.09e-225	-	-	-	L	ko:K07482	-	ko00000	Integrase core domain
PNNFFKII_02515	5.23e-82	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
PNNFFKII_02516	4.56e-168	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
PNNFFKII_02517	1.33e-223	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_02518	0.0	spxB	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
PNNFFKII_02519	6.74e-300	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	NADH oxidase
PNNFFKII_02520	1.61e-224	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_02521	0.0	hsdR	3.1.21.3	-	V	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
PNNFFKII_02522	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
PNNFFKII_02523	6.12e-119	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
PNNFFKII_02524	3.72e-147	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
PNNFFKII_02525	2.39e-226	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_02526	1.34e-134	-	-	-	U	ko:K03205	ko03070,map03070	ko00000,ko00001,ko00002,ko02044	TraM recognition site of TraD and TraG
PNNFFKII_02532	2.15e-168	-	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	C-terminal, D2-small domain, of ClpB protein
PNNFFKII_02534	4.09e-97	topB	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	Bacterial DNA topoisomeraes I ATP-binding domain
PNNFFKII_02535	4.81e-52	-	-	-	E	-	-	-	DNA primase activity
PNNFFKII_02546	1.27e-42	-	-	-	S	-	-	-	Protein of unknown function (DUF3102)
PNNFFKII_02547	3.02e-88	repE	-	-	K	-	-	-	Primase C terminal 1 (PriCT-1)
PNNFFKII_02549	6.34e-39	-	-	-	D	-	-	-	Cellulose biosynthesis protein BcsQ
PNNFFKII_02550	7.3e-216	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Ribonucleotide reductase, small chain
PNNFFKII_02551	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PNNFFKII_02552	7.07e-106	nrdI	-	-	F	ko:K03647	-	ko00000	NrdI Flavodoxin like
PNNFFKII_02553	7.67e-223	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_02554	1.34e-58	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_02555	5.35e-65	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_02556	4.88e-195	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
PNNFFKII_02557	1.75e-76	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
PNNFFKII_02559	6.07e-20	tnp1216	-	-	L	ko:K07498	-	ko00000	DDE domain
PNNFFKII_02561	6.09e-67	-	-	-	D	-	-	-	AAA domain
PNNFFKII_02563	2.61e-133	repE	-	-	K	-	-	-	Primase C terminal 1 (PriCT-1)
PNNFFKII_02564	3.08e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF3102)
PNNFFKII_02571	3.7e-153	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
PNNFFKII_02572	1.27e-222	-	-	-	M	-	-	-	Peptidase family S41
PNNFFKII_02573	2.56e-124	-	-	-	K	-	-	-	Helix-turn-helix domain
PNNFFKII_02574	1.13e-64	-	-	-	K	-	-	-	DNA-binding transcription factor activity
PNNFFKII_02575	3.12e-79	-	-	-	S	-	-	-	SnoaL-like domain
PNNFFKII_02576	3.35e-129	pinR1	-	-	L	-	-	-	Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
PNNFFKII_02577	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
PNNFFKII_02578	2.16e-230	-	-	-	L	-	-	-	PFAM Integrase catalytic region
PNNFFKII_02579	7.92e-127	gbuC	-	-	E	ko:K02001,ko:K02002	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	glycine betaine
PNNFFKII_02580	4.63e-143	gbuB	-	-	E	ko:K02001	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	glycine betaine
PNNFFKII_02581	2.85e-234	gbuA	3.6.3.32	-	E	ko:K02000	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	glycine betaine
PNNFFKII_02582	3.14e-225	-	-	-	L	ko:K07482	-	ko00000	Integrase core domain
PNNFFKII_02583	0.0	traA	-	-	L	-	-	-	MobA/MobL family
PNNFFKII_02584	5.67e-36	-	-	-	-	-	-	-	-
PNNFFKII_02585	5.98e-55	-	-	-	-	-	-	-	-
PNNFFKII_02586	1.43e-71	-	-	-	L	-	-	-	Putative transposase of IS4/5 family (DUF4096)
PNNFFKII_02587	1.06e-72	-	-	-	L	-	-	-	Transposase DDE domain
PNNFFKII_02588	2.44e-211	-	-	-	P	-	-	-	CorA-like Mg2+ transporter protein
PNNFFKII_02589	1.11e-194	-	-	-	L	-	-	-	Transposase
PNNFFKII_02590	5.29e-86	-	-	-	L	-	-	-	the current gene model (or a revised gene model) may contain a frame shift
PNNFFKII_02591	2.4e-34	-	-	-	L	-	-	-	Transposase
PNNFFKII_02593	7.76e-85	-	-	-	D	-	-	-	AAA domain
PNNFFKII_02594	8.83e-06	-	-	-	-	-	-	-	-
PNNFFKII_02595	3.25e-224	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_02596	7.08e-63	-	-	-	L	-	-	-	Resolvase, N terminal domain
PNNFFKII_02597	1.32e-43	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
PNNFFKII_02598	1.09e-99	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
PNNFFKII_02599	9.69e-134	-	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Ribonucleotide reductase, small chain
PNNFFKII_02600	2.96e-253	traA	-	-	L	-	-	-	MobA MobL family protein
PNNFFKII_02601	1.78e-43	-	-	-	-	-	-	-	-
PNNFFKII_02602	1.82e-130	-	-	-	-	-	-	-	-
PNNFFKII_02603	4.99e-63	-	-	-	S	-	-	-	Cag pathogenicity island, type IV secretory system
PNNFFKII_02604	2.56e-69	-	-	-	-	-	-	-	-
PNNFFKII_02605	7.44e-151	-	-	-	-	-	-	-	-
PNNFFKII_02606	0.0	-	-	-	U	-	-	-	AAA-like domain
PNNFFKII_02607	0.0	-	-	-	S	-	-	-	WXG100 protein secretion system (Wss), protein YukC
PNNFFKII_02608	1.34e-279	-	-	-	M	-	-	-	CHAP domain
PNNFFKII_02609	2.25e-120	-	-	-	-	-	-	-	-
PNNFFKII_02610	4.76e-84	-	-	-	CO	-	-	-	COG0526, thiol-disulfide isomerase and thioredoxins
PNNFFKII_02611	1.14e-105	-	-	-	-	-	-	-	-
PNNFFKII_02613	0.0	traK	-	-	U	ko:K03205	ko03070,map03070	ko00000,ko00001,ko00002,ko02044	COG3505 Type IV secretory pathway, VirD4 components
PNNFFKII_02614	8.57e-80	-	-	-	-	-	-	-	-
PNNFFKII_02615	3.42e-198	-	-	-	-	-	-	-	-
PNNFFKII_02616	3.72e-81	-	-	-	-	-	-	-	-
PNNFFKII_02617	0.0	traI	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PNNFFKII_02618	4.22e-41	-	-	-	-	-	-	-	-
PNNFFKII_02619	9.44e-243	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
PNNFFKII_02620	1.94e-124	hsdS	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	type I restriction modification DNA specificity domain protein
PNNFFKII_02621	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
PNNFFKII_02622	0.0	hsdR	3.1.21.3	-	V	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
PNNFFKII_02623	8.4e-130	-	-	-	K	-	-	-	Helix-turn-helix domain
PNNFFKII_02624	3.69e-84	-	-	-	-	-	-	-	-
PNNFFKII_02625	1.58e-70	-	-	-	-	-	-	-	-
PNNFFKII_02626	0.0	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
PNNFFKII_02627	2.81e-181	-	-	-	-	-	-	-	-
PNNFFKII_02628	2.85e-129	pinR1	-	-	L	-	-	-	Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
PNNFFKII_02629	5.84e-294	-	-	-	S	-	-	-	Pyridine nucleotide-disulphide oxidoreductase
PNNFFKII_02630	6.3e-222	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_02631	2.74e-299	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	NADH oxidase
PNNFFKII_02632	0.0	spxB	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
PNNFFKII_02633	1.69e-121	pinR1	-	-	L	-	-	-	Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
PNNFFKII_02634	1.15e-105	-	-	-	J	-	-	-	tRNA cytidylyltransferase activity
PNNFFKII_02635	5.08e-58	-	-	-	-	-	-	-	-
PNNFFKII_02636	2.56e-180	-	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	CobQ CobB MinD ParA nucleotide binding domain protein
PNNFFKII_02637	8.44e-46	-	-	-	-	-	-	-	-
PNNFFKII_02638	4.07e-221	repA	-	-	S	-	-	-	Replication initiator protein A
PNNFFKII_02639	5.41e-158	-	-	-	S	-	-	-	Fic/DOC family
PNNFFKII_02640	5.76e-53	-	-	-	-	-	-	-	-
PNNFFKII_02641	9.79e-37	-	-	-	-	-	-	-	-
PNNFFKII_02642	5.86e-11	-	-	-	L	-	-	-	transposase and inactivated derivatives, IS30 family
PNNFFKII_02644	1.4e-44	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
PNNFFKII_02645	3.05e-73	ytpP	-	-	CO	-	-	-	Thioredoxin
PNNFFKII_02646	1.24e-09	racD	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Asp/Glu/Hydantoin racemase
PNNFFKII_02647	4.47e-229	trxB	1.8.1.9	-	O	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Glucose inhibited division protein A
PNNFFKII_02648	2.82e-153	frnE	5.3.4.1	-	Q	ko:K01829	-	ko00000,ko01000	dithiol-disulfide isomerase involved in polyketide biosynthesis
PNNFFKII_02650	0.0	-	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulphide oxidoreductase
PNNFFKII_02651	1.15e-67	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	Bacterial toxin of type II toxin-antitoxin system, YafQ
PNNFFKII_02652	8.83e-57	-	-	-	S	ko:K07473	-	ko00000,ko02048	RelB antitoxin
PNNFFKII_02653	2.45e-45	-	-	-	L	-	-	-	Integrase
PNNFFKII_02654	1.46e-282	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
PNNFFKII_02655	1.01e-84	-	-	-	L	-	-	-	Integrase
PNNFFKII_02656	6.33e-83	-	-	-	-	-	-	-	-
PNNFFKII_02657	1.02e-38	-	-	-	-	-	-	-	-
PNNFFKII_02658	8.59e-221	-	-	-	L	-	-	-	Initiator Replication protein
PNNFFKII_02659	6.66e-115	-	-	-	-	-	-	-	-
PNNFFKII_02660	2.48e-10	-	-	-	L	-	-	-	transposase and inactivated derivatives, IS30 family
PNNFFKII_02661	6.36e-145	M1-798	-	-	K	-	-	-	Rhodanese Homology Domain
PNNFFKII_02662	2.51e-61	-	-	-	CO	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	cell redox homeostasis
PNNFFKII_02663	1.94e-70	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
PNNFFKII_02664	3.05e-73	ytpP	-	-	CO	-	-	-	Thioredoxin
PNNFFKII_02665	1.24e-09	racD	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Asp/Glu/Hydantoin racemase
PNNFFKII_02666	4.47e-229	trxB	1.8.1.9	-	O	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Glucose inhibited division protein A
PNNFFKII_02667	2.82e-153	frnE	5.3.4.1	-	Q	ko:K01829	-	ko00000,ko01000	dithiol-disulfide isomerase involved in polyketide biosynthesis
PNNFFKII_02669	0.0	-	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulphide oxidoreductase
PNNFFKII_02670	1.15e-67	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	Bacterial toxin of type II toxin-antitoxin system, YafQ
PNNFFKII_02671	8.83e-57	-	-	-	S	ko:K07473	-	ko00000,ko02048	RelB antitoxin
PNNFFKII_02672	2.45e-45	-	-	-	L	-	-	-	Integrase
PNNFFKII_02673	1.46e-282	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
PNNFFKII_02674	1.01e-84	-	-	-	L	-	-	-	Integrase
PNNFFKII_02675	6.33e-83	-	-	-	-	-	-	-	-
PNNFFKII_02676	1.02e-38	-	-	-	-	-	-	-	-
PNNFFKII_02677	8.59e-221	-	-	-	L	-	-	-	Initiator Replication protein
PNNFFKII_02678	6.66e-115	-	-	-	-	-	-	-	-
PNNFFKII_02679	2.48e-10	-	-	-	L	-	-	-	transposase and inactivated derivatives, IS30 family
PNNFFKII_02680	6.36e-145	M1-798	-	-	K	-	-	-	Rhodanese Homology Domain
PNNFFKII_02681	2.51e-61	-	-	-	CO	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	cell redox homeostasis
PNNFFKII_02682	1.94e-70	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
PNNFFKII_02683	3.05e-73	ytpP	-	-	CO	-	-	-	Thioredoxin
PNNFFKII_02684	1.24e-09	racD	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Asp/Glu/Hydantoin racemase
PNNFFKII_02685	4.47e-229	trxB	1.8.1.9	-	O	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Glucose inhibited division protein A
PNNFFKII_02686	2.82e-153	frnE	5.3.4.1	-	Q	ko:K01829	-	ko00000,ko01000	dithiol-disulfide isomerase involved in polyketide biosynthesis
PNNFFKII_02688	0.0	-	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulphide oxidoreductase
PNNFFKII_02689	1.15e-67	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	Bacterial toxin of type II toxin-antitoxin system, YafQ
PNNFFKII_02690	8.83e-57	-	-	-	S	ko:K07473	-	ko00000,ko02048	RelB antitoxin
PNNFFKII_02691	2.45e-45	-	-	-	L	-	-	-	Integrase
PNNFFKII_02692	1.46e-282	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
PNNFFKII_02693	1.01e-84	-	-	-	L	-	-	-	Integrase
PNNFFKII_02694	6.33e-83	-	-	-	-	-	-	-	-
PNNFFKII_02695	1.02e-38	-	-	-	-	-	-	-	-
PNNFFKII_02696	1.88e-182	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_02697	2.22e-15	-	-	-	C	-	-	-	Flavodoxin
PNNFFKII_02698	7.81e-247	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PNNFFKII_02699	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
PNNFFKII_02700	7.39e-224	-	-	-	L	ko:K07482	-	ko00000	Integrase core domain
PNNFFKII_02701	3.02e-303	traI	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PNNFFKII_02702	2.29e-181	traI	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PNNFFKII_02703	0.0	traA	-	-	L	-	-	-	MobA MobL family protein
PNNFFKII_02704	1.16e-52	-	-	-	-	-	-	-	-
PNNFFKII_02705	1.33e-46	-	-	-	S	-	-	-	protein conserved in bacteria
PNNFFKII_02706	1.53e-62	repA	-	-	S	-	-	-	Replication initiator protein A
PNNFFKII_02707	3.07e-48	-	-	-	L	-	-	-	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PNNFFKII_02708	1.18e-184	soj	-	-	D	-	-	-	CobQ CobB MinD ParA nucleotide binding domain protein
PNNFFKII_02709	2.03e-31	-	-	-	S	-	-	-	Family of unknown function (DUF5388)
PNNFFKII_02710	3.96e-225	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_02711	2.03e-124	tnpR1	-	-	L	-	-	-	Resolvase, N terminal domain
PNNFFKII_02712	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
PNNFFKII_02714	4.92e-152	repA	-	-	S	-	-	-	Replication initiator protein A
PNNFFKII_02715	3.31e-57	-	-	-	L	ko:K07473	-	ko00000,ko02048	Addiction module antitoxin, RelB DinJ family
PNNFFKII_02716	1.49e-97	-	-	-	L	-	-	-	Transposase DDE domain
PNNFFKII_02717	3.9e-88	-	-	-	L	-	-	-	Putative transposase of IS4/5 family (DUF4096)
PNNFFKII_02718	8.5e-55	-	-	-	-	-	-	-	-
PNNFFKII_02719	3.99e-36	-	-	-	-	-	-	-	-
PNNFFKII_02720	0.0	traA	-	-	L	-	-	-	MobA MobL family protein
PNNFFKII_02721	1.03e-131	pinR1	-	-	L	-	-	-	Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
PNNFFKII_02722	1.43e-294	-	-	-	S	-	-	-	Pyridine nucleotide-disulphide oxidoreductase
PNNFFKII_02723	5.35e-261	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	Pyridine nucleotide-disulphide oxidoreductase
PNNFFKII_02724	9.33e-224	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_02726	9.92e-122	soj	-	-	D	-	-	-	CobQ CobB MinD ParA nucleotide binding domain protein
PNNFFKII_02727	4.21e-155	-	-	-	-	-	-	-	-
PNNFFKII_02728	1.04e-50	ycnE	-	-	S	-	-	-	Antibiotic biosynthesis monooxygenase
PNNFFKII_02729	3.25e-64	-	-	-	-	-	-	-	-
PNNFFKII_02730	3.6e-20	-	-	-	T	-	-	-	Belongs to the universal stress protein A family
PNNFFKII_02733	1.27e-42	-	-	-	S	-	-	-	Protein of unknown function (DUF3102)
PNNFFKII_02734	3.79e-90	repE	-	-	K	-	-	-	Primase C terminal 1 (PriCT-1)
PNNFFKII_02735	6.74e-06	repE	-	-	K	-	-	-	Primase C terminal 1 (PriCT-1)
PNNFFKII_02736	4.24e-122	-	-	-	D	-	-	-	Cellulose biosynthesis protein BcsQ
PNNFFKII_02737	5.45e-61	-	-	-	-	-	-	-	-
PNNFFKII_02739	8.81e-72	-	-	-	L	-	-	-	recombinase activity
PNNFFKII_02740	1.96e-225	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_02742	2.51e-30	-	-	-	L	ko:K07483	-	ko00000	Transposase
PNNFFKII_02743	4.45e-161	-	-	-	L	-	-	-	PFAM Integrase catalytic region
PNNFFKII_02744	1.76e-72	-	-	-	L	ko:K07483,ko:K09936	ko02024,map02024	ko00000,ko00001,ko02000	Helix-turn-helix domain
PNNFFKII_02745	2.96e-156	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_02746	4.79e-14	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
PNNFFKII_02748	7.93e-163	cps1C	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
PNNFFKII_02749	3.63e-10	mobC	-	-	S	-	-	-	Bacterial mobilisation protein (MobC)
PNNFFKII_02751	4.73e-26	WQ51_00220	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix domain
PNNFFKII_02752	1.99e-09	-	-	-	S	-	-	-	Protein of unknown function (DUF3278)
PNNFFKII_02754	5.97e-20	-	-	-	-	-	-	-	-
PNNFFKII_02755	5.06e-37	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PNNFFKII_02756	1.9e-22	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PNNFFKII_02757	3.9e-88	-	-	-	L	-	-	-	Putative transposase of IS4/5 family (DUF4096)
PNNFFKII_02758	1.49e-97	-	-	-	L	-	-	-	Transposase DDE domain
PNNFFKII_02759	2.15e-17	-	-	-	-	-	-	-	-
PNNFFKII_02760	1.18e-178	-	-	-	K	-	-	-	Helix-turn-helix domain
PNNFFKII_02762	1.89e-61	-	-	-	-	-	-	-	-
PNNFFKII_02763	2.2e-223	-	-	-	L	-	-	-	Initiator Replication protein
PNNFFKII_02764	5.91e-38	-	-	-	-	-	-	-	-
PNNFFKII_02765	4.21e-42	-	-	-	L	-	-	-	Integrase
PNNFFKII_02766	6.17e-31	-	-	-	L	-	-	-	Integrase
PNNFFKII_02767	3.57e-38	-	-	-	L	-	-	-	Putative transposase of IS4/5 family (DUF4096)
PNNFFKII_02768	1.36e-65	-	-	-	L	-	-	-	Transposase DDE domain
PNNFFKII_02769	1.14e-21	-	-	-	L	-	-	-	Integrase
PNNFFKII_02770	1.06e-108	-	-	-	-	-	-	-	-
PNNFFKII_02771	3.9e-88	-	-	-	L	-	-	-	Putative transposase of IS4/5 family (DUF4096)
PNNFFKII_02772	1.49e-97	-	-	-	L	-	-	-	Transposase DDE domain
PNNFFKII_02774	1.89e-61	-	-	-	-	-	-	-	-
PNNFFKII_02775	2.2e-223	-	-	-	L	-	-	-	Initiator Replication protein
PNNFFKII_02776	5.91e-38	-	-	-	-	-	-	-	-
PNNFFKII_02777	4.21e-42	-	-	-	L	-	-	-	Integrase
PNNFFKII_02778	6.17e-31	-	-	-	L	-	-	-	Integrase
PNNFFKII_02779	3.57e-38	-	-	-	L	-	-	-	Putative transposase of IS4/5 family (DUF4096)
PNNFFKII_02780	1.36e-65	-	-	-	L	-	-	-	Transposase DDE domain
PNNFFKII_02781	1.14e-21	-	-	-	L	-	-	-	Integrase
PNNFFKII_02782	1.06e-108	-	-	-	-	-	-	-	-
PNNFFKII_02783	3.9e-88	-	-	-	L	-	-	-	Putative transposase of IS4/5 family (DUF4096)
PNNFFKII_02784	1.49e-97	-	-	-	L	-	-	-	Transposase DDE domain
PNNFFKII_02785	2.15e-17	-	-	-	-	-	-	-	-
PNNFFKII_02786	1.18e-178	-	-	-	K	-	-	-	Helix-turn-helix domain
PNNFFKII_02788	1.89e-61	-	-	-	-	-	-	-	-
PNNFFKII_02789	2.2e-223	-	-	-	L	-	-	-	Initiator Replication protein
PNNFFKII_02790	5.91e-38	-	-	-	-	-	-	-	-
PNNFFKII_02791	4.21e-42	-	-	-	L	-	-	-	Integrase
PNNFFKII_02792	6.17e-31	-	-	-	L	-	-	-	Integrase
PNNFFKII_02793	3.57e-38	-	-	-	L	-	-	-	Putative transposase of IS4/5 family (DUF4096)
PNNFFKII_02797	1.66e-07	mobC	-	-	S	-	-	-	Bacterial mobilisation protein (MobC)
PNNFFKII_02799	4.73e-26	WQ51_00220	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix domain
PNNFFKII_02800	1.99e-09	-	-	-	S	-	-	-	Protein of unknown function (DUF3278)
PNNFFKII_02802	5.97e-20	-	-	-	-	-	-	-	-
PNNFFKII_02803	5.06e-37	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PNNFFKII_02804	1.9e-22	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PNNFFKII_02807	1.49e-97	-	-	-	L	-	-	-	Transposase DDE domain
PNNFFKII_02808	3.9e-88	-	-	-	L	-	-	-	Putative transposase of IS4/5 family (DUF4096)
PNNFFKII_02809	1.9e-22	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PNNFFKII_02810	5.06e-37	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PNNFFKII_02814	1.99e-09	-	-	-	S	-	-	-	Protein of unknown function (DUF3278)
PNNFFKII_02815	4.73e-26	WQ51_00220	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix domain
PNNFFKII_02817	3.63e-10	mobC	-	-	S	-	-	-	Bacterial mobilisation protein (MobC)
PNNFFKII_02819	6.69e-17	repB	-	-	L	-	-	-	Initiator Replication protein
PNNFFKII_02820	7.1e-95	-	-	-	S	-	-	-	Initiator Replication protein
PNNFFKII_02824	3.75e-58	-	-	-	S	-	-	-	Bacterial mobilisation protein (MobC)
PNNFFKII_02825	1.99e-60	-	-	-	D	-	-	-	Relaxase/Mobilisation nuclease domain
PNNFFKII_02828	3.57e-26	-	-	-	U	-	-	-	Relaxase/Mobilisation nuclease domain
PNNFFKII_02829	3.75e-58	-	-	-	S	-	-	-	Bacterial mobilisation protein (MobC)
PNNFFKII_02833	5.3e-62	-	-	-	S	-	-	-	Initiator Replication protein