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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
CMMHAGAM_00001	2.05e-276	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
CMMHAGAM_00002	1.26e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
CMMHAGAM_00003	5.54e-69	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
CMMHAGAM_00004	8.31e-228	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
CMMHAGAM_00005	1.52e-43	-	-	-	S	-	-	-	Protein of unknown function (DUF1146)
CMMHAGAM_00006	5.78e-92	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
CMMHAGAM_00007	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CMMHAGAM_00008	4.54e-216	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CMMHAGAM_00009	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CMMHAGAM_00010	2.67e-119	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CMMHAGAM_00011	1.69e-86	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CMMHAGAM_00012	4.36e-39	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CMMHAGAM_00013	4.44e-161	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
CMMHAGAM_00014	5.28e-146	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CMMHAGAM_00015	1.86e-242	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
CMMHAGAM_00016	1.51e-199	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
CMMHAGAM_00017	6.6e-237	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CMMHAGAM_00018	2.01e-145	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
CMMHAGAM_00019	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Domain of unknown function (DUF1727)
CMMHAGAM_00022	3.94e-250	ampC	-	-	V	-	-	-	Beta-lactamase
CMMHAGAM_00023	2.41e-276	-	-	-	EGP	-	-	-	Major Facilitator
CMMHAGAM_00024	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
CMMHAGAM_00025	5.3e-137	vanZ	-	-	V	-	-	-	VanZ like family
CMMHAGAM_00026	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
CMMHAGAM_00027	0.0	yclK	-	-	T	-	-	-	Histidine kinase
CMMHAGAM_00028	7.05e-167	-	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
CMMHAGAM_00029	9.01e-90	-	-	-	S	-	-	-	SdpI/YhfL protein family
CMMHAGAM_00030	2.74e-242	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
CMMHAGAM_00031	3.88e-285	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
CMMHAGAM_00032	3.01e-128	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
CMMHAGAM_00034	2.51e-280	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CMMHAGAM_00035	4.37e-241	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
CMMHAGAM_00036	3.69e-30	-	-	-	-	-	-	-	-
CMMHAGAM_00037	1.94e-100	-	-	-	U	ko:K02248	-	ko00000,ko00002,ko02044	Putative Competence protein ComGF
CMMHAGAM_00038	1.68e-55	-	-	-	-	-	-	-	-
CMMHAGAM_00039	1.72e-92	-	-	-	-	ko:K02246	-	ko00000,ko00002,ko02044	-
CMMHAGAM_00040	7.88e-63	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	competence protein ComGC
CMMHAGAM_00041	5.15e-224	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
CMMHAGAM_00042	5.04e-231	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
CMMHAGAM_00043	5.65e-171	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
CMMHAGAM_00044	4.7e-120	-	-	-	S	-	-	-	VanZ like family
CMMHAGAM_00045	1.41e-142	ylbE	-	-	GM	-	-	-	NAD(P)H-binding
CMMHAGAM_00046	4.8e-38	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CMMHAGAM_00048	0.0	-	-	-	E	-	-	-	Amino acid permease
CMMHAGAM_00049	1.98e-233	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
CMMHAGAM_00050	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CMMHAGAM_00051	0.0	pts33BCA	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CMMHAGAM_00052	5.06e-196	bglG5	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
CMMHAGAM_00053	4.36e-263	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
CMMHAGAM_00054	3.07e-112	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CMMHAGAM_00055	1.41e-153	-	-	-	-	-	-	-	-
CMMHAGAM_00056	3.23e-98	copY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Penicillinase repressor
CMMHAGAM_00057	1.62e-189	-	-	-	S	-	-	-	hydrolase
CMMHAGAM_00058	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CMMHAGAM_00059	2.76e-221	ybbR	-	-	S	-	-	-	YbbR-like protein
CMMHAGAM_00060	2.13e-194	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
CMMHAGAM_00061	3.46e-266	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CMMHAGAM_00062	3.69e-170	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CMMHAGAM_00063	2.25e-175	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CMMHAGAM_00064	1.25e-263	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
CMMHAGAM_00065	4.91e-209	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
CMMHAGAM_00066	8.73e-127	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
CMMHAGAM_00067	5.86e-114	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
CMMHAGAM_00068	4.68e-234	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
CMMHAGAM_00069	6.67e-174	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CMMHAGAM_00070	8.06e-200	ycsE	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
CMMHAGAM_00071	3.07e-124	-	-	-	-	-	-	-	-
CMMHAGAM_00072	5.46e-183	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
CMMHAGAM_00073	2.86e-286	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
CMMHAGAM_00074	2.86e-244	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
CMMHAGAM_00075	1.6e-241	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	Putative sugar-binding domain
CMMHAGAM_00077	0.0	-	-	-	-	-	-	-	-
CMMHAGAM_00078	0.0	ycaM	-	-	E	-	-	-	amino acid
CMMHAGAM_00079	8.04e-185	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
CMMHAGAM_00080	5.38e-101	-	-	-	K	-	-	-	MerR HTH family regulatory protein
CMMHAGAM_00081	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
CMMHAGAM_00082	4.77e-124	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
CMMHAGAM_00083	5.56e-167	ybbM	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
CMMHAGAM_00084	3.16e-144	ybbL	-	-	S	ko:K02068	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CMMHAGAM_00085	0.0	-	-	-	S	-	-	-	SH3-like domain
CMMHAGAM_00086	1.16e-128	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
CMMHAGAM_00087	8.59e-221	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
CMMHAGAM_00088	2.78e-251	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
CMMHAGAM_00089	2.44e-211	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
CMMHAGAM_00090	1.88e-118	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
CMMHAGAM_00091	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
CMMHAGAM_00092	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
CMMHAGAM_00093	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
CMMHAGAM_00094	1.98e-231	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
CMMHAGAM_00095	5.73e-240	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
CMMHAGAM_00096	8.14e-203	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CMMHAGAM_00097	3.54e-230	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
CMMHAGAM_00098	1.02e-27	-	-	-	-	-	-	-	-
CMMHAGAM_00099	3.19e-238	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CMMHAGAM_00100	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
CMMHAGAM_00101	1.55e-122	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CMMHAGAM_00102	4.17e-172	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
CMMHAGAM_00103	2.68e-314	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
CMMHAGAM_00104	1.19e-152	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
CMMHAGAM_00105	4.56e-267	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	transferase
CMMHAGAM_00106	1.5e-293	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
CMMHAGAM_00107	8.51e-248	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CMMHAGAM_00108	3.92e-123	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CMMHAGAM_00109	1.63e-154	ymfM	-	-	S	ko:K15539	-	ko00000	Helix-turn-helix domain
CMMHAGAM_00110	6.87e-172	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
CMMHAGAM_00111	5.49e-301	ymfH	-	-	S	-	-	-	Peptidase M16
CMMHAGAM_00112	2.83e-282	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
CMMHAGAM_00113	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
CMMHAGAM_00114	3.12e-91	-	-	-	S	-	-	-	Protein of unknown function (DUF1149)
CMMHAGAM_00115	2.12e-136	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
CMMHAGAM_00116	2.19e-270	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
CMMHAGAM_00117	1.99e-87	srlB	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
CMMHAGAM_00118	7.13e-256	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
CMMHAGAM_00119	2.66e-122	-	-	-	S	-	-	-	SNARE associated Golgi protein
CMMHAGAM_00120	0.0	mycA	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
CMMHAGAM_00121	2.19e-218	rluD2	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
CMMHAGAM_00122	1.91e-195	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CMMHAGAM_00123	1.7e-147	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
CMMHAGAM_00124	4.21e-144	-	-	-	S	-	-	-	CYTH
CMMHAGAM_00125	8.16e-148	yjbH	-	-	Q	-	-	-	Thioredoxin
CMMHAGAM_00126	6.73e-208	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
CMMHAGAM_00127	1.5e-178	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
CMMHAGAM_00128	6.28e-87	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
CMMHAGAM_00129	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CMMHAGAM_00130	1.29e-54	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
CMMHAGAM_00131	2.6e-37	-	-	-	-	-	-	-	-
CMMHAGAM_00132	0.0	clpE	-	-	O	ko:K03697	-	ko00000,ko03110	Belongs to the ClpA ClpB family
CMMHAGAM_00133	5.93e-60	XK27_09445	-	-	S	-	-	-	Domain of unknown function (DUF1827)
CMMHAGAM_00134	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
CMMHAGAM_00135	1.24e-181	hlyX	-	-	S	ko:K03699	-	ko00000,ko02042	Transporter associated domain
CMMHAGAM_00136	3.85e-98	-	-	-	-	-	-	-	-
CMMHAGAM_00137	7.1e-111	-	-	-	-	-	-	-	-
CMMHAGAM_00138	1.38e-185	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
CMMHAGAM_00139	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CMMHAGAM_00140	3.81e-226	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
CMMHAGAM_00141	7.74e-61	-	-	-	-	-	-	-	-
CMMHAGAM_00142	3.54e-277	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
CMMHAGAM_00143	1.05e-272	mvaA	1.1.1.88, 2.3.1.9	-	C	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the HMG-CoA reductase family
CMMHAGAM_00144	7.39e-274	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
CMMHAGAM_00145	1.6e-215	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
CMMHAGAM_00146	9.85e-209	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
CMMHAGAM_00147	2.45e-211	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
CMMHAGAM_00148	5.14e-105	ykuP	-	-	C	ko:K03839	-	ko00000	Flavodoxin
CMMHAGAM_00149	3.7e-113	gtcA1	-	-	S	-	-	-	Teichoic acid glycosylation protein
CMMHAGAM_00150	1.62e-278	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
CMMHAGAM_00152	9.4e-317	chbC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CMMHAGAM_00153	2.83e-281	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
CMMHAGAM_00154	4.31e-167	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CMMHAGAM_00155	1.29e-295	-	-	-	E	ko:K03294	-	ko00000	amino acid
CMMHAGAM_00156	0.0	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
CMMHAGAM_00157	5.83e-67	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
CMMHAGAM_00158	4.43e-29	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
CMMHAGAM_00159	0.0	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
CMMHAGAM_00160	8.59e-133	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
CMMHAGAM_00161	0.0	yhdP	-	-	S	-	-	-	Transporter associated domain
CMMHAGAM_00162	7.48e-155	-	-	-	C	-	-	-	nitroreductase
CMMHAGAM_00163	1.76e-52	-	-	-	-	-	-	-	-
CMMHAGAM_00164	1.96e-113	ptbA	2.7.1.208	-	G	ko:K02755,ko:K02777,ko:K20107,ko:K20108	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
CMMHAGAM_00165	1.52e-103	-	-	-	-	-	-	-	-
CMMHAGAM_00166	1.62e-188	glvR	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
CMMHAGAM_00167	0.0	glvC	2.7.1.208	-	G	ko:K02749,ko:K02750	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
CMMHAGAM_00168	3.84e-191	-	-	-	S	-	-	-	hydrolase
CMMHAGAM_00169	3.54e-194	-	-	-	S	-	-	-	Phospholipase, patatin family
CMMHAGAM_00170	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
CMMHAGAM_00171	1.88e-175	-	-	-	K	ko:K22103	-	ko00000,ko03000	DeoR C terminal sensor domain
CMMHAGAM_00172	2.9e-79	-	-	-	S	-	-	-	Enterocin A Immunity
CMMHAGAM_00173	3.18e-198	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
CMMHAGAM_00174	6.63e-174	gntR	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
CMMHAGAM_00175	4.28e-224	rihC	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
CMMHAGAM_00176	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
CMMHAGAM_00177	4.48e-162	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CMMHAGAM_00178	8.52e-215	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CMMHAGAM_00179	2.97e-208	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
CMMHAGAM_00180	1.55e-308	srrA1	-	-	G	ko:K02027,ko:K17244	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
CMMHAGAM_00181	1.01e-295	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
CMMHAGAM_00182	7.3e-111	-	-	-	-	-	-	-	-
CMMHAGAM_00183	0.0	-	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
CMMHAGAM_00184	4.55e-149	-	-	-	L	-	-	-	Resolvase, N-terminal
CMMHAGAM_00185	1.07e-207	-	-	-	S	-	-	-	Protein of unknown function (DUF2974)
CMMHAGAM_00186	3.65e-141	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CMMHAGAM_00187	7.42e-123	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CMMHAGAM_00188	3.16e-192	glnH	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CMMHAGAM_00189	1.19e-174	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CMMHAGAM_00190	4.52e-147	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Zeta toxin
CMMHAGAM_00191	4.83e-51	-	-	-	G	-	-	-	MFS/sugar transport protein
CMMHAGAM_00192	6.04e-242	-	-	-	G	-	-	-	MFS/sugar transport protein
CMMHAGAM_00193	1.79e-131	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
CMMHAGAM_00194	0.0	XK27_09605	-	-	V	ko:K18892	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter transmembrane region
CMMHAGAM_00195	0.0	XK27_09600	-	-	V	ko:K06147,ko:K18891	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
CMMHAGAM_00196	7.98e-35	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
CMMHAGAM_00197	2.49e-189	peb1A	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CMMHAGAM_00198	2.62e-166	-	-	-	F	-	-	-	glutamine amidotransferase
CMMHAGAM_00199	2.92e-313	steT	-	-	E	ko:K03294	-	ko00000	amino acid
CMMHAGAM_00200	3.24e-306	steT	-	-	E	ko:K03294	-	ko00000	amino acid
CMMHAGAM_00201	2.61e-193	-	-	-	-	-	-	-	-
CMMHAGAM_00202	7.09e-222	ydhF	-	-	S	-	-	-	Aldo keto reductase
CMMHAGAM_00203	0.0	ykpA	-	-	S	-	-	-	ABC transporter, ATP-binding protein
CMMHAGAM_00204	4.37e-266	pepA	-	-	E	-	-	-	M42 glutamyl aminopeptidase
CMMHAGAM_00205	1.32e-19	-	-	-	L	-	-	-	transposase activity
CMMHAGAM_00206	5.14e-27	-	-	-	M	-	-	-	domain protein
CMMHAGAM_00207	7.17e-112	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CMMHAGAM_00208	7.34e-91	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CMMHAGAM_00209	1.96e-51	-	-	-	K	-	-	-	HxlR-like helix-turn-helix
CMMHAGAM_00210	3.12e-95	-	-	-	K	-	-	-	LytTr DNA-binding domain
CMMHAGAM_00211	7.36e-89	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
CMMHAGAM_00212	7.76e-179	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
CMMHAGAM_00213	9.37e-144	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	domain protein
CMMHAGAM_00214	8.87e-106	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CMMHAGAM_00215	1.52e-93	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CMMHAGAM_00216	9.64e-38	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
CMMHAGAM_00217	8.69e-76	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CMMHAGAM_00218	7.54e-194	add	3.5.4.2, 3.5.4.4	-	F	ko:K01488,ko:K02029,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CMMHAGAM_00219	3.01e-255	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
CMMHAGAM_00220	1.14e-107	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
CMMHAGAM_00221	1.75e-256	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
CMMHAGAM_00222	6.17e-158	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CMMHAGAM_00223	1.59e-141	yqeK	-	-	H	-	-	-	Hydrolase, HD family
CMMHAGAM_00224	5.09e-78	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
CMMHAGAM_00225	1.39e-276	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
CMMHAGAM_00226	1.32e-126	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
CMMHAGAM_00227	3.52e-163	csrR	-	-	K	-	-	-	response regulator
CMMHAGAM_00228	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
CMMHAGAM_00229	2.66e-154	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
CMMHAGAM_00230	1.78e-284	-	-	-	S	-	-	-	SLAP domain
CMMHAGAM_00231	7.36e-114	-	-	-	S	ko:K19055	-	ko00000,ko01000,ko03016	Aminoacyl-tRNA editing domain
CMMHAGAM_00232	6.97e-216	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
CMMHAGAM_00233	5.58e-59	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
CMMHAGAM_00234	3.67e-178	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CMMHAGAM_00235	4.16e-82	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
CMMHAGAM_00237	4.43e-143	glnP9	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter, permease protein
CMMHAGAM_00238	5.01e-151	glnP7	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter permease
CMMHAGAM_00239	5.64e-173	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CMMHAGAM_00240	9.94e-209	cjaA	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
CMMHAGAM_00241	3.39e-253	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CMMHAGAM_00242	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
CMMHAGAM_00243	2.55e-94	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
CMMHAGAM_00244	8.21e-215	ldh3	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	lactate/malate dehydrogenase, alpha/beta C-terminal domain
CMMHAGAM_00245	5.5e-203	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
CMMHAGAM_00246	1.05e-33	-	-	-	-	-	-	-	-
CMMHAGAM_00247	0.0	sufI	-	-	Q	-	-	-	Multicopper oxidase
CMMHAGAM_00248	3.82e-188	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
CMMHAGAM_00249	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
CMMHAGAM_00250	7.62e-290	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
CMMHAGAM_00251	8.37e-296	-	-	-	S	ko:K12941	-	ko00000,ko01002	Peptidase dimerisation domain
CMMHAGAM_00252	1.12e-176	-	-	-	S	-	-	-	Protein of unknown function (DUF3100)
CMMHAGAM_00253	7.04e-108	-	-	-	S	-	-	-	An automated process has identified a potential problem with this gene model
CMMHAGAM_00254	4.96e-63	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2263)
CMMHAGAM_00255	6.13e-163	-	-	-	S	-	-	-	SLAP domain
CMMHAGAM_00256	6.09e-121	-	-	-	-	-	-	-	-
CMMHAGAM_00258	4.96e-159	-	-	-	M	ko:K14193	ko05150,map05150	ko00000,ko00001	Iron Transport-associated domain
CMMHAGAM_00259	1.45e-203	isdE	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
CMMHAGAM_00260	1.39e-204	isdF	-	-	U	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CMMHAGAM_00261	7.1e-177	-	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	abc transporter atp-binding protein
CMMHAGAM_00262	2.22e-60	hupB2	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
CMMHAGAM_00263	7.04e-218	-	-	-	G	-	-	-	BadF/BadG/BcrA/BcrD ATPase family
CMMHAGAM_00264	0.0	-	-	-	S	-	-	-	membrane
CMMHAGAM_00265	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
CMMHAGAM_00266	6.25e-29	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
CMMHAGAM_00267	1.94e-126	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CMMHAGAM_00268	2.29e-154	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Rhomboid family
CMMHAGAM_00269	1e-47	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
CMMHAGAM_00270	4.95e-89	yqhL	-	-	P	-	-	-	Rhodanese-like protein
CMMHAGAM_00271	1.98e-218	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CMMHAGAM_00272	2.05e-286	ynbB	-	-	P	-	-	-	aluminum resistance
CMMHAGAM_00273	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
CMMHAGAM_00274	2.88e-220	-	-	-	-	-	-	-	-
CMMHAGAM_00275	1.72e-204	-	-	-	-	-	-	-	-
CMMHAGAM_00276	2.79e-19	-	-	-	S	-	-	-	HicA toxin of bacterial toxin-antitoxin,
CMMHAGAM_00277	1.92e-42	-	-	-	S	-	-	-	protein encoded in hypervariable junctions of pilus gene clusters
CMMHAGAM_00279	1.17e-45	-	-	-	-	-	-	-	-
CMMHAGAM_00280	3e-271	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
CMMHAGAM_00281	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CMMHAGAM_00283	2.06e-56	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
CMMHAGAM_00284	0.0	-	-	-	E	-	-	-	Amino acid permease
CMMHAGAM_00285	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
CMMHAGAM_00286	3.2e-18	-	-	-	-	-	-	-	-
CMMHAGAM_00287	2.76e-83	-	-	-	-	-	-	-	-
CMMHAGAM_00288	0.0	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
CMMHAGAM_00289	0.0	prtB	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
CMMHAGAM_00290	6.27e-224	dhaK	2.7.1.121	-	G	ko:K05878	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak1 domain
CMMHAGAM_00291	1.69e-121	dhaL	2.7.1.121	-	S	ko:K05879	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak2
CMMHAGAM_00292	1.41e-72	dhaM	2.7.1.121	-	S	ko:K05881	ko00561,map00561	ko00000,ko00001,ko01000,ko02000	PTS system fructose IIA component
CMMHAGAM_00293	1.73e-157	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
CMMHAGAM_00294	4.21e-242	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
CMMHAGAM_00295	5.29e-238	lacM	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
CMMHAGAM_00296	0.0	lacL	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
CMMHAGAM_00297	4.02e-238	lacR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
CMMHAGAM_00298	0.0	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
CMMHAGAM_00299	0.0	lacZ	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	-beta-galactosidase
CMMHAGAM_00300	2.51e-281	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
CMMHAGAM_00301	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
CMMHAGAM_00302	6.54e-251	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
CMMHAGAM_00303	2.14e-48	-	-	-	-	-	-	-	-
CMMHAGAM_00304	1.54e-222	-	-	-	K	ko:K03484	-	ko00000,ko03000	Periplasmic binding protein domain
CMMHAGAM_00305	1.93e-303	msmE	-	-	G	ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
CMMHAGAM_00306	1.7e-201	msmF	-	-	P	ko:K10118	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CMMHAGAM_00307	8.75e-197	-	-	-	P	ko:K10119	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CMMHAGAM_00308	1.72e-268	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CMMHAGAM_00309	0.0	melA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
CMMHAGAM_00310	0.0	gtfA	2.4.1.7	GH13	G	ko:K00690	ko00500,map00500	ko00000,ko00001,ko01000	Sucrose glucosyltransferase
CMMHAGAM_00311	3.08e-147	-	-	-	T	-	-	-	Region found in RelA / SpoT proteins
CMMHAGAM_00312	7.52e-136	dltr	-	-	K	-	-	-	response regulator
CMMHAGAM_00313	3.72e-300	sptS	-	-	T	-	-	-	Histidine kinase
CMMHAGAM_00314	3.34e-267	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
CMMHAGAM_00315	1.59e-90	-	-	-	O	-	-	-	OsmC-like protein
CMMHAGAM_00316	1.93e-122	yhaH	-	-	S	-	-	-	Protein of unknown function (DUF805)
CMMHAGAM_00317	1.24e-116	-	-	-	-	-	-	-	-
CMMHAGAM_00318	0.0	-	-	-	-	-	-	-	-
CMMHAGAM_00319	1.87e-107	-	-	-	S	-	-	-	Fic/DOC family
CMMHAGAM_00320	0.0	potE	-	-	E	-	-	-	Amino Acid
CMMHAGAM_00321	3.32e-283	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CMMHAGAM_00322	2.12e-311	lctO	1.13.12.4	-	C	ko:K00467,ko:K10530	ko00620,map00620	ko00000,ko00001,ko01000	L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
CMMHAGAM_00323	1.2e-59	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
CMMHAGAM_00324	8.67e-151	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
CMMHAGAM_00325	1.6e-69	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
CMMHAGAM_00326	4e-201	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
CMMHAGAM_00327	3.3e-159	-	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
CMMHAGAM_00328	1.87e-58	-	-	-	-	-	-	-	-
CMMHAGAM_00329	0.0	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
CMMHAGAM_00330	3.8e-48	eriC	-	-	P	ko:K03281	-	ko00000	chloride
CMMHAGAM_00332	2.73e-154	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CMMHAGAM_00333	1.56e-164	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
CMMHAGAM_00334	2.64e-213	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
CMMHAGAM_00335	1.68e-121	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CMMHAGAM_00336	2.22e-231	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
CMMHAGAM_00337	2.04e-313	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
CMMHAGAM_00338	4.22e-269	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
CMMHAGAM_00339	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
CMMHAGAM_00340	0.0	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
CMMHAGAM_00341	2.89e-191	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
CMMHAGAM_00342	8.74e-62	-	-	-	-	-	-	-	-
CMMHAGAM_00343	2.88e-105	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
CMMHAGAM_00344	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
CMMHAGAM_00345	5.44e-56	-	-	-	S	-	-	-	Alpha beta hydrolase
CMMHAGAM_00346	4.93e-49	-	-	-	-	-	-	-	-
CMMHAGAM_00347	4.33e-69	-	-	-	-	-	-	-	-
CMMHAGAM_00348	2.69e-188	supH	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
CMMHAGAM_00349	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
CMMHAGAM_00350	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
CMMHAGAM_00351	1.82e-86	yusI	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	Belongs to the ArsC family
CMMHAGAM_00352	3.02e-228	lipA	-	-	I	-	-	-	Carboxylesterase family
CMMHAGAM_00354	7.03e-271	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CMMHAGAM_00355	1.48e-202	cinI	-	-	S	ko:K06889	-	ko00000	Serine hydrolase (FSH1)
CMMHAGAM_00356	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2207)
CMMHAGAM_00357	2.07e-38	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
CMMHAGAM_00359	0.0	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
CMMHAGAM_00360	1.5e-193	-	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CMMHAGAM_00361	6.82e-66	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
CMMHAGAM_00362	3.94e-64	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
CMMHAGAM_00363	4.31e-257	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
CMMHAGAM_00364	2.11e-133	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CMMHAGAM_00365	1.61e-92	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
CMMHAGAM_00366	3.38e-86	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CMMHAGAM_00367	2.06e-198	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CMMHAGAM_00368	4.86e-249	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CMMHAGAM_00369	1.53e-47	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CMMHAGAM_00370	5.51e-206	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
CMMHAGAM_00371	7.22e-197	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
CMMHAGAM_00372	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
CMMHAGAM_00373	8.94e-100	-	-	-	S	-	-	-	ASCH
CMMHAGAM_00374	5.97e-145	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
CMMHAGAM_00375	2.37e-46	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
CMMHAGAM_00376	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CMMHAGAM_00377	1.27e-219	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CMMHAGAM_00378	3.18e-310	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CMMHAGAM_00379	1.98e-180	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
CMMHAGAM_00380	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
CMMHAGAM_00381	3.75e-212	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
CMMHAGAM_00382	1.51e-153	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
CMMHAGAM_00383	3.84e-160	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
CMMHAGAM_00384	6.84e-43	-	-	-	-	-	-	-	-
CMMHAGAM_00385	4.02e-151	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CMMHAGAM_00386	2.53e-146	-	-	-	L	-	-	-	Helix-turn-helix domain of transposase family ISL3
CMMHAGAM_00387	1.33e-35	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
CMMHAGAM_00388	8.29e-75	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
CMMHAGAM_00389	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
CMMHAGAM_00390	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CMMHAGAM_00391	3.69e-233	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
CMMHAGAM_00392	1.04e-45	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CMMHAGAM_00393	1.31e-55	-	-	-	-	-	-	-	-
CMMHAGAM_00394	8.87e-54	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CMMHAGAM_00395	1.98e-115	-	-	-	E	-	-	-	Zn peptidase
CMMHAGAM_00396	1.89e-47	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CMMHAGAM_00397	7.46e-108	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
CMMHAGAM_00398	1.93e-65	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
CMMHAGAM_00399	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CMMHAGAM_00400	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CMMHAGAM_00401	1.79e-268	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CMMHAGAM_00402	1.13e-48	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain protein YaaA
CMMHAGAM_00403	6.66e-244	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
CMMHAGAM_00404	1.83e-316	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CMMHAGAM_00405	3.26e-23	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
CMMHAGAM_00406	3.62e-79	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
CMMHAGAM_00407	2.65e-189	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
CMMHAGAM_00408	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
CMMHAGAM_00409	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
CMMHAGAM_00410	0.0	pox1	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
CMMHAGAM_00411	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CMMHAGAM_00412	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
CMMHAGAM_00413	9.23e-225	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
CMMHAGAM_00414	5.41e-89	-	-	-	C	-	-	-	lyase activity
CMMHAGAM_00416	5.27e-97	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
CMMHAGAM_00417	3.34e-215	ybhF_1	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
CMMHAGAM_00418	0.0	-	-	-	M	ko:K01992	-	ko00000,ko00002,ko02000	Exporter of polyketide antibiotics
CMMHAGAM_00419	2.41e-148	-	-	-	K	ko:K09017	-	ko00000,ko03000	Transcriptional regulator
CMMHAGAM_00420	1.16e-128	pinR1	-	-	L	-	-	-	Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
CMMHAGAM_00421	0.0	-	-	-	L	-	-	-	Transposase
CMMHAGAM_00422	3.98e-41	-	-	-	E	-	-	-	Zn peptidase
CMMHAGAM_00423	8.29e-76	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CMMHAGAM_00424	6.36e-114	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
CMMHAGAM_00425	8.24e-271	-	-	-	-	-	-	-	-
CMMHAGAM_00426	6.46e-27	-	-	-	-	-	-	-	-
CMMHAGAM_00427	1.28e-315	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
CMMHAGAM_00428	3.14e-137	-	-	-	-	-	-	-	-
CMMHAGAM_00429	1.1e-145	crp2	-	-	K	ko:K10914,ko:K21562	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	helix_turn_helix, cAMP Regulatory protein
CMMHAGAM_00430	0.0	copA	3.6.3.3, 3.6.3.5, 3.6.3.54	-	P	ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
CMMHAGAM_00431	4.44e-65	-	-	-	S	-	-	-	Cupredoxin-like domain
CMMHAGAM_00432	4.19e-84	-	-	-	S	-	-	-	Cupredoxin-like domain
CMMHAGAM_00433	3.36e-100	copY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Penicillinase repressor
CMMHAGAM_00434	6.14e-106	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
CMMHAGAM_00435	1.02e-74	-	-	-	K	-	-	-	Helix-turn-helix domain
CMMHAGAM_00436	1.28e-38	-	-	-	-	-	-	-	-
CMMHAGAM_00437	3.66e-292	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
CMMHAGAM_00438	5.26e-188	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
CMMHAGAM_00439	1.56e-287	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
CMMHAGAM_00440	1.11e-79	yneE	-	-	K	-	-	-	Transcriptional regulator
CMMHAGAM_00441	3.71e-87	yneE	-	-	K	-	-	-	Transcriptional regulator
CMMHAGAM_00442	3.84e-52	-	-	-	S	ko:K07124	-	ko00000	Enoyl-(Acyl carrier protein) reductase
CMMHAGAM_00443	4.1e-60	-	-	-	S	ko:K07124	-	ko00000	Enoyl-(Acyl carrier protein) reductase
CMMHAGAM_00444	5.05e-11	-	-	-	-	-	-	-	-
CMMHAGAM_00445	3.69e-54	-	-	-	L	ko:K07473	-	ko00000,ko02048	Addiction module antitoxin, RelB DinJ family
CMMHAGAM_00446	3.28e-295	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
CMMHAGAM_00447	2.29e-165	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
CMMHAGAM_00448	1.43e-153	-	-	-	S	-	-	-	ABC-2 family transporter protein
CMMHAGAM_00449	3.5e-101	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
CMMHAGAM_00450	2.07e-119	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CMMHAGAM_00451	6.82e-292	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
CMMHAGAM_00452	1.02e-169	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
CMMHAGAM_00453	5.46e-93	-	-	-	-	-	-	-	-
CMMHAGAM_00454	4.86e-165	dgk2	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
CMMHAGAM_00455	5.04e-147	dak	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
CMMHAGAM_00456	2.59e-170	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
CMMHAGAM_00457	2.64e-206	-	-	-	S	-	-	-	Aldo/keto reductase family
CMMHAGAM_00458	3.63e-221	yufQ	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
CMMHAGAM_00459	8.8e-262	mglC	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
CMMHAGAM_00460	0.0	mglA	3.6.3.17	-	S	ko:K02056,ko:K06400	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
CMMHAGAM_00461	3.28e-257	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
CMMHAGAM_00462	1.69e-256	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
CMMHAGAM_00463	7.18e-131	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
CMMHAGAM_00464	0.0	ppc	4.1.1.31	-	H	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CMMHAGAM_00465	0.0	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CMMHAGAM_00466	6e-247	-	-	-	S	-	-	-	DUF218 domain
CMMHAGAM_00467	7.21e-157	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
CMMHAGAM_00468	2.86e-139	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Transcriptional regulator
CMMHAGAM_00469	3.62e-202	-	-	-	EGP	-	-	-	Major facilitator Superfamily
CMMHAGAM_00470	9.39e-71	-	-	-	-	-	-	-	-
CMMHAGAM_00471	2.95e-204	mutR	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CMMHAGAM_00472	1.36e-89	-	-	-	S	-	-	-	Putative adhesin
CMMHAGAM_00473	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
CMMHAGAM_00474	1.4e-263	napA	-	-	P	-	-	-	Sodium/hydrogen exchanger family
CMMHAGAM_00475	0.0	cadA	-	-	P	-	-	-	P-type ATPase
CMMHAGAM_00476	3.41e-107	ykuL	-	-	S	-	-	-	(CBS) domain
CMMHAGAM_00477	3.27e-277	-	-	-	S	-	-	-	Membrane
CMMHAGAM_00478	6.47e-64	-	-	-	-	-	-	-	-
CMMHAGAM_00479	9.18e-27	-	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
CMMHAGAM_00480	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
CMMHAGAM_00481	2.53e-305	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
CMMHAGAM_00482	4.98e-48	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
CMMHAGAM_00483	6.8e-316	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CMMHAGAM_00484	3.75e-216	pbpX2	-	-	V	-	-	-	Beta-lactamase
CMMHAGAM_00485	1.24e-172	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
CMMHAGAM_00486	1.34e-183	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CMMHAGAM_00487	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
CMMHAGAM_00488	1.96e-49	-	-	-	-	-	-	-	-
CMMHAGAM_00489	0.0	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
CMMHAGAM_00490	2.39e-161	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CMMHAGAM_00491	3.77e-305	pts13C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CMMHAGAM_00492	4.74e-213	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
CMMHAGAM_00493	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	AAA domain (Cdc48 subfamily)
CMMHAGAM_00494	7.1e-148	-	-	-	V	-	-	-	ABC transporter transmembrane region
CMMHAGAM_00495	4.18e-148	sipS3	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
CMMHAGAM_00496	6.49e-310	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
CMMHAGAM_00497	8.72e-313	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
CMMHAGAM_00498	2.26e-220	-	-	-	S	-	-	-	PFAM Archaeal ATPase
CMMHAGAM_00499	8.09e-180	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
CMMHAGAM_00500	2.75e-292	-	-	-	E	-	-	-	amino acid
CMMHAGAM_00501	6.23e-243	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
CMMHAGAM_00502	1.07e-262	-	4.2.1.126	-	S	ko:K07106,ko:K09963	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Bacterial protein of unknown function (DUF871)
CMMHAGAM_00505	1.16e-239	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
CMMHAGAM_00506	0.0	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CMMHAGAM_00507	5.2e-315	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CMMHAGAM_00508	6.51e-40	-	-	-	S	-	-	-	Protein conserved in bacteria
CMMHAGAM_00509	1.09e-74	-	-	-	-	-	-	-	-
CMMHAGAM_00510	3.49e-113	-	-	-	-	-	-	-	-
CMMHAGAM_00511	0.0	yheS_2	-	-	S	ko:K18231,ko:K19349	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ATPases associated with a variety of cellular activities
CMMHAGAM_00512	1.84e-238	-	-	-	S	-	-	-	DUF218 domain
CMMHAGAM_00513	1.5e-141	-	-	-	-	-	-	-	-
CMMHAGAM_00514	2.28e-138	-	-	-	-	-	-	-	-
CMMHAGAM_00515	1.28e-152	yicL	-	-	EG	-	-	-	EamA-like transporter family
CMMHAGAM_00516	4.04e-212	-	-	-	EG	-	-	-	EamA-like transporter family
CMMHAGAM_00517	9.05e-206	-	-	-	EG	-	-	-	EamA-like transporter family
CMMHAGAM_00518	1.16e-48	-	-	-	-	-	-	-	-
CMMHAGAM_00521	2.11e-108	-	-	-	M	-	-	-	NlpC/P60 family
CMMHAGAM_00522	4.51e-170	cobQ	-	-	S	ko:K07009	-	ko00000	glutamine amidotransferase
CMMHAGAM_00524	1.3e-90	-	-	-	L	-	-	-	RelB antitoxin
CMMHAGAM_00525	2.45e-58	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
CMMHAGAM_00526	6.95e-62	yoeB	-	-	S	ko:K19158	-	ko00000,ko01000,ko02048	YoeB-like toxin of bacterial type II toxin-antitoxin system
CMMHAGAM_00527	6.42e-199	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CMMHAGAM_00528	1.78e-29	-	-	-	-	-	-	-	-
CMMHAGAM_00529	7.13e-123	-	-	-	-	-	-	-	-
CMMHAGAM_00530	2.61e-195	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
CMMHAGAM_00531	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CMMHAGAM_00532	7.48e-188	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
CMMHAGAM_00533	6.36e-230	yvdE	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
CMMHAGAM_00534	1.58e-282	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CMMHAGAM_00535	1.5e-101	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
CMMHAGAM_00536	0.0	malA1	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain
CMMHAGAM_00537	0.0	nplT	3.2.1.133, 3.2.1.135, 3.2.1.54	GH13	G	ko:K01208	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
CMMHAGAM_00538	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
CMMHAGAM_00539	9.37e-150	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
CMMHAGAM_00540	4.23e-268	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CMMHAGAM_00541	2.73e-282	-	-	-	G	ko:K15770	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
CMMHAGAM_00542	9.2e-317	malF	-	-	P	ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CMMHAGAM_00543	1.39e-197	malG	-	-	P	ko:K15772	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CMMHAGAM_00546	1.11e-146	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
CMMHAGAM_00547	2.84e-68	-	-	-	F	-	-	-	Phosphorylase superfamily
CMMHAGAM_00548	1.17e-55	yxaM	-	-	EGP	-	-	-	Major facilitator Superfamily
CMMHAGAM_00549	1.87e-87	yxaM	-	-	EGP	-	-	-	Major facilitator Superfamily
CMMHAGAM_00550	1.09e-177	-	-	-	S	-	-	-	Alpha/beta hydrolase family
CMMHAGAM_00551	2.95e-123	rimL	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
CMMHAGAM_00552	0.0	-	-	-	-	-	-	-	-
CMMHAGAM_00553	3.08e-155	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
CMMHAGAM_00554	9.27e-86	-	-	-	-	-	-	-	-
CMMHAGAM_00555	1.29e-64	-	-	-	S	-	-	-	MazG-like family
CMMHAGAM_00556	1.5e-168	-	-	-	S	-	-	-	Protein of unknown function (DUF2785)
CMMHAGAM_00557	1.36e-76	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CMMHAGAM_00558	3.66e-114	yokL3	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
CMMHAGAM_00559	1.01e-64	-	-	-	-	-	-	-	-
CMMHAGAM_00560	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
CMMHAGAM_00561	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CMMHAGAM_00562	7.11e-293	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
CMMHAGAM_00563	8.21e-57	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
CMMHAGAM_00564	1.34e-314	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
CMMHAGAM_00565	1.15e-280	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
CMMHAGAM_00566	1.96e-148	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
CMMHAGAM_00567	1.13e-41	-	-	-	M	-	-	-	Lysin motif
CMMHAGAM_00568	8.49e-146	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
CMMHAGAM_00569	1.89e-167	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
CMMHAGAM_00570	7.57e-135	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CMMHAGAM_00571	8.61e-168	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
CMMHAGAM_00572	1.88e-80	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
CMMHAGAM_00573	1.16e-213	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
CMMHAGAM_00574	1.72e-213	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
CMMHAGAM_00575	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
CMMHAGAM_00576	5.46e-233	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
CMMHAGAM_00577	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
CMMHAGAM_00578	1.25e-38	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
CMMHAGAM_00579	0.0	yfkN	3.1.3.6, 3.1.4.16	-	F	ko:K01119	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
CMMHAGAM_00580	5.14e-38	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
CMMHAGAM_00581	3.57e-47	-	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
CMMHAGAM_00582	8.69e-186	-	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
CMMHAGAM_00583	5e-225	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
CMMHAGAM_00584	0.0	oatA	-	-	I	-	-	-	Acyltransferase
CMMHAGAM_00585	5.39e-309	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CMMHAGAM_00586	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
CMMHAGAM_00587	3.87e-141	yngC	-	-	S	-	-	-	SNARE associated Golgi protein
CMMHAGAM_00588	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
CMMHAGAM_00589	3.99e-231	gyaR	1.1.1.26, 1.1.1.399, 1.1.1.95	-	CH	ko:K00015,ko:K00058	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CMMHAGAM_00590	3.84e-192	yxeH	-	-	S	-	-	-	hydrolase
CMMHAGAM_00591	9.85e-199	-	-	-	S	-	-	-	reductase
CMMHAGAM_00592	5.43e-276	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CMMHAGAM_00593	5.51e-284	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
CMMHAGAM_00594	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
CMMHAGAM_00595	4.28e-312	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
CMMHAGAM_00596	1.8e-99	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
CMMHAGAM_00597	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CMMHAGAM_00598	9.32e-81	-	-	-	-	-	-	-	-
CMMHAGAM_00599	1.38e-223	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
CMMHAGAM_00600	1.3e-115	ybaK	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CMMHAGAM_00601	6.02e-282	-	-	-	S	-	-	-	Putative threonine/serine exporter
CMMHAGAM_00602	1.66e-183	citR	-	-	K	-	-	-	Putative sugar-binding domain
CMMHAGAM_00603	2.93e-67	-	-	-	-	-	-	-	-
CMMHAGAM_00604	7.91e-14	-	-	-	-	-	-	-	-
CMMHAGAM_00605	8.1e-87	-	-	-	S	-	-	-	Domain of unknown function DUF1828
CMMHAGAM_00606	7.34e-123	-	-	-	S	ko:K16924	-	ko00000,ko00002,ko02000	UPF0397 protein
CMMHAGAM_00607	0.0	ykoD	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CMMHAGAM_00608	2.58e-189	cbiQ	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt transport
CMMHAGAM_00609	1.46e-31	-	-	-	-	-	-	-	-
CMMHAGAM_00610	1.24e-93	ytwI	-	-	S	-	-	-	Protein of unknown function (DUF441)
CMMHAGAM_00611	0.0	citF	2.8.3.10	-	H	ko:K01643	ko02020,map02020	ko00000,ko00001,ko01000	Citrate (pro-3S)-lyase alpha chain
CMMHAGAM_00612	2.54e-214	citE	4.1.3.34	-	G	ko:K01644	ko02020,map02020	ko00000,ko00001,ko01000	Belongs to the HpcH HpaI aldolase family
CMMHAGAM_00613	1.6e-59	citD	-	-	C	ko:K01646	ko02020,map02020	ko00000,ko00001	Covalent carrier of the coenzyme of citrate lyase
CMMHAGAM_00614	6.29e-250	citC	6.2.1.22	-	H	ko:K01910	ko02020,map02020	ko00000,ko00001,ko01000	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
CMMHAGAM_00615	3.45e-196	-	-	-	I	-	-	-	Alpha/beta hydrolase family
CMMHAGAM_00616	0.0	citP	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
CMMHAGAM_00617	5.26e-171	-	-	-	H	-	-	-	Aldolase/RraA
CMMHAGAM_00618	0.0	pepC4	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
CMMHAGAM_00619	1.66e-217	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
CMMHAGAM_00620	0.0	frdA	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
CMMHAGAM_00621	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
CMMHAGAM_00622	2.34e-122	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CMMHAGAM_00623	5.74e-243	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CMMHAGAM_00624	1.78e-204	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
CMMHAGAM_00625	5.41e-225	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
CMMHAGAM_00626	0.0	aha1	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
CMMHAGAM_00627	5.55e-119	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CMMHAGAM_00628	1.27e-231	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CMMHAGAM_00629	0.0	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
CMMHAGAM_00630	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
CMMHAGAM_00631	0.0	-	-	-	P	ko:K06148	-	ko00000,ko02000	ABC transporter
CMMHAGAM_00632	6.04e-49	-	-	-	-	-	-	-	-
CMMHAGAM_00634	1.46e-161	-	-	-	S	-	-	-	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
CMMHAGAM_00635	3.24e-113	-	-	-	K	-	-	-	GNAT family
CMMHAGAM_00636	5.71e-262	XK27_00915	-	-	C	-	-	-	Luciferase-like monooxygenase
CMMHAGAM_00637	1.54e-128	rbtT	-	-	P	ko:K13021	-	ko00000,ko02000	Major Facilitator Superfamily
CMMHAGAM_00638	0.000802	-	-	-	K	-	-	-	Bacterial regulatory helix-turn-helix protein, lysR family
CMMHAGAM_00640	4.96e-113	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CMMHAGAM_00641	0.0	-	-	-	L	-	-	-	Plasmid pRiA4b ORF-3-like protein
CMMHAGAM_00642	5.69e-314	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
CMMHAGAM_00643	6.47e-155	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
CMMHAGAM_00644	1.1e-97	ltrA	-	-	S	-	-	-	Bacterial low temperature requirement A protein (LtrA)
CMMHAGAM_00645	4.04e-143	ybbB	-	-	S	-	-	-	Protein of unknown function (DUF1211)
CMMHAGAM_00646	9.4e-151	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
CMMHAGAM_00647	4.73e-259	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CMMHAGAM_00648	2.25e-137	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin synthase
CMMHAGAM_00649	7.6e-290	ribBA	3.5.4.25, 4.1.99.12	-	H	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
CMMHAGAM_00650	1.15e-104	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
CMMHAGAM_00651	2.34e-38	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
CMMHAGAM_00652	1.51e-112	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
CMMHAGAM_00653	1.77e-207	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
CMMHAGAM_00654	7.23e-263	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
CMMHAGAM_00655	2.29e-315	-	-	-	M	-	-	-	Glycosyl transferase
CMMHAGAM_00657	6.34e-193	-	-	-	-	-	-	-	-
CMMHAGAM_00658	4.07e-77	-	-	-	M	-	-	-	Peptidase family M1 domain
CMMHAGAM_00659	3.82e-44	-	-	-	M	-	-	-	Peptidase family M1 domain
CMMHAGAM_00660	6.44e-106	cutC	-	-	P	ko:K06201	-	ko00000	Participates in the control of copper homeostasis
CMMHAGAM_00661	1.6e-48	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
CMMHAGAM_00662	4.31e-190	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
CMMHAGAM_00663	1.49e-94	yvfR	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
CMMHAGAM_00664	1.96e-69	XK27_09830	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 type transporter
CMMHAGAM_00665	9.37e-68	desK	2.7.13.3	-	T	ko:K07778	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
CMMHAGAM_00666	8.18e-105	desR	-	-	K	ko:K02479,ko:K07693	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	helix_turn_helix, Lux Regulon
CMMHAGAM_00667	4.58e-226	-	-	-	C	-	-	-	Oxidoreductase
CMMHAGAM_00669	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
CMMHAGAM_00670	1.39e-92	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
CMMHAGAM_00671	5.69e-78	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
CMMHAGAM_00673	3.72e-111	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CMMHAGAM_00674	1.61e-72	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
CMMHAGAM_00675	6.56e-189	-	2.1.1.172	-	J	ko:K00564,ko:K10716	-	ko00000,ko01000,ko02000,ko03009	Ion channel
CMMHAGAM_00676	5.31e-149	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
CMMHAGAM_00677	6.15e-36	-	-	-	-	-	-	-	-
CMMHAGAM_00678	1.08e-117	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
CMMHAGAM_00679	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CMMHAGAM_00680	1.19e-46	-	-	-	M	-	-	-	lipopolysaccharide 3-alpha-galactosyltransferase activity
CMMHAGAM_00681	1.55e-68	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CMMHAGAM_00682	9.21e-142	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CMMHAGAM_00683	1.18e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2508)
CMMHAGAM_00684	1.15e-146	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CMMHAGAM_00685	1.58e-70	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
CMMHAGAM_00686	1.45e-199	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
CMMHAGAM_00687	1.4e-80	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
CMMHAGAM_00688	1.84e-201	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CMMHAGAM_00689	3.85e-179	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
CMMHAGAM_00690	1.83e-112	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
CMMHAGAM_00691	1.62e-171	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
CMMHAGAM_00692	3.93e-125	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
CMMHAGAM_00693	4.42e-249	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CMMHAGAM_00694	1.69e-70	-	-	-	L	-	-	-	Transposase
CMMHAGAM_00695	0.0	pulA	3.2.1.41	CBM48,GH13	G	ko:K01200	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko01000	belongs to the glycosyl hydrolase 13 family
CMMHAGAM_00696	1.83e-101	uspA	-	-	T	-	-	-	universal stress protein
CMMHAGAM_00697	1.35e-56	-	-	-	-	-	-	-	-
CMMHAGAM_00698	4.21e-302	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
CMMHAGAM_00699	5.68e-110	-	-	-	S	-	-	-	Protein of unknown function (DUF1694)
CMMHAGAM_00700	3.07e-142	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CMMHAGAM_00701	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
CMMHAGAM_00702	2.58e-274	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
CMMHAGAM_00703	3.89e-285	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CMMHAGAM_00704	8.58e-122	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CMMHAGAM_00705	1.33e-122	-	-	-	-	-	-	-	-
CMMHAGAM_00706	7.88e-143	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CMMHAGAM_00707	2.33e-286	-	-	-	S	-	-	-	SLAP domain
CMMHAGAM_00709	1.28e-312	-	-	-	L	-	-	-	Transposase
CMMHAGAM_00710	0.0	-	-	-	S	-	-	-	SLAP domain
CMMHAGAM_00711	1.93e-137	-	-	-	S	-	-	-	Protein of unknown function (DUF3232)
CMMHAGAM_00712	1.23e-52	-	-	-	K	-	-	-	Helix-turn-helix domain
CMMHAGAM_00713	4.99e-88	-	-	-	-	-	-	-	-
CMMHAGAM_00714	4.85e-58	-	-	-	-	-	-	-	-
CMMHAGAM_00715	2.47e-156	-	-	-	-	-	-	-	-
CMMHAGAM_00716	2.1e-153	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
CMMHAGAM_00717	1.89e-48	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CMMHAGAM_00718	1.06e-86	-	-	-	S	-	-	-	GtrA-like protein
CMMHAGAM_00719	1.22e-219	yfdH	-	GT2	M	ko:K12999	-	ko00000,ko01000,ko01003,ko01005	Glycosyltransferase, group 2 family protein
CMMHAGAM_00720	3.33e-123	-	-	-	S	-	-	-	Protein of unknown function (DUF3990)
CMMHAGAM_00721	2.09e-59	-	-	-	-	-	-	-	-
CMMHAGAM_00722	3.84e-05	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CMMHAGAM_00723	0.0	yoaB	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
CMMHAGAM_00724	1.09e-222	-	-	-	-	-	-	-	-
CMMHAGAM_00725	1.17e-136	-	-	-	K	-	-	-	Helix-turn-helix domain
CMMHAGAM_00726	1.83e-40	-	-	-	K	-	-	-	Helix-turn-helix domain
CMMHAGAM_00727	9.17e-20	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
CMMHAGAM_00728	5.17e-83	-	-	-	S	-	-	-	Phage derived protein Gp49-like (DUF891)
CMMHAGAM_00729	5.85e-56	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CMMHAGAM_00730	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
CMMHAGAM_00731	1.27e-308	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
CMMHAGAM_00732	3.17e-164	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
CMMHAGAM_00733	1.07e-150	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
CMMHAGAM_00734	5.81e-226	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
CMMHAGAM_00735	4.1e-189	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
CMMHAGAM_00736	5.43e-122	mreD	-	-	-	ko:K03571	-	ko00000,ko03036	-
CMMHAGAM_00737	1.4e-09	-	-	-	S	-	-	-	Protein of unknown function (DUF4044)
CMMHAGAM_00738	1.02e-72	-	-	-	S	-	-	-	Protein of unknown function (DUF3397)
CMMHAGAM_00739	5.63e-102	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
CMMHAGAM_00740	4.45e-225	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
CMMHAGAM_00741	6.55e-72	ftsL	-	-	D	-	-	-	Cell division protein FtsL
CMMHAGAM_00742	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
CMMHAGAM_00743	3.12e-224	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CMMHAGAM_00744	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CMMHAGAM_00745	1.16e-265	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CMMHAGAM_00746	1.33e-195	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
CMMHAGAM_00747	1.88e-310	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
CMMHAGAM_00748	9.61e-305	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CMMHAGAM_00749	1.43e-96	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
CMMHAGAM_00750	2.42e-60	yggT	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
CMMHAGAM_00751	5.69e-192	ylmH	-	-	S	-	-	-	S4 domain protein
CMMHAGAM_00752	1.55e-138	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
CMMHAGAM_00753	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CMMHAGAM_00754	2.32e-43	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
CMMHAGAM_00755	1.04e-133	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
CMMHAGAM_00756	1.8e-57	-	-	-	-	-	-	-	-
CMMHAGAM_00757	2.05e-163	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CMMHAGAM_00758	1.33e-275	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
CMMHAGAM_00759	2.97e-76	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
CMMHAGAM_00760	1.9e-279	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
CMMHAGAM_00761	4.7e-163	pgm	-	-	G	-	-	-	Phosphoglycerate mutase family
CMMHAGAM_00762	1.34e-147	-	-	-	S	-	-	-	repeat protein
CMMHAGAM_00763	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
CMMHAGAM_00764	0.0	-	-	-	L	-	-	-	Nuclease-related domain
CMMHAGAM_00765	3.07e-235	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
CMMHAGAM_00766	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CMMHAGAM_00767	1.09e-46	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
CMMHAGAM_00768	9.73e-132	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
CMMHAGAM_00769	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
CMMHAGAM_00770	3.35e-269	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
CMMHAGAM_00771	9.94e-71	ylbG	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2129)
CMMHAGAM_00772	5.21e-126	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
CMMHAGAM_00773	7.07e-107	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CMMHAGAM_00774	4.94e-245	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
CMMHAGAM_00775	3.15e-125	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
CMMHAGAM_00776	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
CMMHAGAM_00777	1.49e-225	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
CMMHAGAM_00778	6.28e-47	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
CMMHAGAM_00779	7.11e-57	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CMMHAGAM_00780	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CMMHAGAM_00781	4.65e-192	-	-	-	-	-	-	-	-
CMMHAGAM_00782	4.06e-287	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CMMHAGAM_00783	1.09e-292	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
CMMHAGAM_00784	3.04e-297	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CMMHAGAM_00785	9.2e-136	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
CMMHAGAM_00786	1.32e-27	potE	-	-	E	-	-	-	Amino Acid
CMMHAGAM_00787	2.35e-132	potE	-	-	E	-	-	-	Amino acid permease
CMMHAGAM_00788	6.25e-246	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
CMMHAGAM_00789	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
CMMHAGAM_00790	5.89e-314	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
CMMHAGAM_00791	5.23e-106	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
CMMHAGAM_00792	1.4e-281	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
CMMHAGAM_00793	1.49e-224	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CMMHAGAM_00794	6.89e-185	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
CMMHAGAM_00795	4.67e-279	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
CMMHAGAM_00796	1.44e-253	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CMMHAGAM_00797	4.2e-249	pbpX1	-	-	V	-	-	-	Beta-lactamase
CMMHAGAM_00798	0.0	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
CMMHAGAM_00799	1.83e-54	-	-	-	C	-	-	-	FMN_bind
CMMHAGAM_00800	9.44e-110	-	-	-	-	-	-	-	-
CMMHAGAM_00801	1.3e-164	iunH	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	inosine-uridine preferring nucleoside hydrolase
CMMHAGAM_00802	2.89e-116	alkD	-	-	L	-	-	-	DNA alkylation repair enzyme
CMMHAGAM_00803	0.0	pbg4	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CMMHAGAM_00804	3.83e-165	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA domain
CMMHAGAM_00805	1.32e-74	pts20B	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
CMMHAGAM_00806	7.88e-79	celC	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose Cellobiose specific IIA subunit
CMMHAGAM_00807	2.1e-109	-	-	-	-	-	-	-	-
CMMHAGAM_00808	1.74e-45	celD	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CMMHAGAM_00809	1.9e-240	celD	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CMMHAGAM_00810	4.04e-94	-	-	-	S	-	-	-	Domain of unknown function (DUF3284)
CMMHAGAM_00811	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CMMHAGAM_00812	4.84e-171	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA
CMMHAGAM_00813	7.23e-55	-	-	-	-	-	-	-	-
CMMHAGAM_00814	0.0	pts23C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CMMHAGAM_00815	0.0	pbg6	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CMMHAGAM_00816	5.95e-204	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
CMMHAGAM_00817	7.07e-112	yfhC	-	-	C	-	-	-	nitroreductase
CMMHAGAM_00818	9.43e-127	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
CMMHAGAM_00819	3.52e-311	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
CMMHAGAM_00820	3.66e-189	-	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
CMMHAGAM_00821	8.23e-132	-	-	-	I	-	-	-	PAP2 superfamily
CMMHAGAM_00822	1.72e-243	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
CMMHAGAM_00824	8.58e-228	-	-	-	S	-	-	-	Conserved hypothetical protein 698
CMMHAGAM_00825	8.4e-112	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
CMMHAGAM_00826	1.41e-05	-	1.3.99.4	-	C	ko:K05898	ko00984,ko01100,ko01120,map00984,map01100,map01120	ko00000,ko00001,ko01000	Succinate dehydrogenase fumarate reductase flavoprotein subunit
CMMHAGAM_00827	8.71e-126	-	-	-	S	ko:K07025	-	ko00000	Haloacid dehalogenase-like hydrolase
CMMHAGAM_00828	1.3e-117	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
CMMHAGAM_00829	2.74e-96	-	-	-	K	ko:K03827	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
CMMHAGAM_00830	1.21e-245	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CMMHAGAM_00831	3.27e-229	oppF	-	-	P	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CMMHAGAM_00832	2.27e-220	oppB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CMMHAGAM_00833	3.06e-181	oppC5	-	-	P	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CMMHAGAM_00834	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CMMHAGAM_00835	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CMMHAGAM_00836	2.8e-160	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
CMMHAGAM_00837	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
CMMHAGAM_00838	3.65e-230	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
CMMHAGAM_00839	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CMMHAGAM_00840	4.18e-25	-	-	-	-	-	-	-	-
CMMHAGAM_00841	1.89e-172	cysA	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CMMHAGAM_00842	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
CMMHAGAM_00843	0.0	ctrA	-	-	E	ko:K03294	-	ko00000	amino acid
CMMHAGAM_00844	2.75e-72	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
CMMHAGAM_00845	5.7e-291	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CMMHAGAM_00846	6.78e-60	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
CMMHAGAM_00847	2.08e-122	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CMMHAGAM_00848	1.98e-174	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
CMMHAGAM_00849	1.64e-74	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
CMMHAGAM_00850	8.95e-273	-	-	-	S	-	-	-	SLAP domain
CMMHAGAM_00851	6.91e-156	ung2	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil-DNA glycosylase
CMMHAGAM_00852	1.69e-185	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
CMMHAGAM_00853	9.86e-146	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CMMHAGAM_00854	4.16e-51	ynzC	-	-	S	-	-	-	UPF0291 protein
CMMHAGAM_00855	1.3e-40	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
CMMHAGAM_00856	0.0	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CMMHAGAM_00857	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CMMHAGAM_00858	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
CMMHAGAM_00859	5.69e-39	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	NADH oxidase
CMMHAGAM_00860	1.41e-109	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
CMMHAGAM_00861	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CMMHAGAM_00862	4.24e-185	-	-	-	S	-	-	-	SLAP domain
CMMHAGAM_00863	4.32e-77	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
CMMHAGAM_00864	6.44e-23	-	-	-	D	-	-	-	Domain of Unknown Function (DUF1542)
CMMHAGAM_00865	1.58e-29	-	-	-	-	-	-	-	-
CMMHAGAM_00866	4.52e-81	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
CMMHAGAM_00867	1.47e-301	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
CMMHAGAM_00868	3.67e-276	-	-	-	EGP	ko:K08196	-	ko00000,ko02000	Major Facilitator
CMMHAGAM_00869	0.0	-	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
CMMHAGAM_00870	4.4e-172	-	-	-	-	-	-	-	-
CMMHAGAM_00871	4.81e-76	-	-	-	S	-	-	-	Antibiotic biosynthesis monooxygenase
CMMHAGAM_00872	4.85e-97	yiaC	-	-	K	ko:K03826	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
CMMHAGAM_00873	7.86e-287	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
CMMHAGAM_00874	2.08e-145	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
CMMHAGAM_00875	1.79e-245	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
CMMHAGAM_00876	9.01e-180	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
CMMHAGAM_00877	4.33e-236	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CMMHAGAM_00878	5.86e-168	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
CMMHAGAM_00879	2.87e-120	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
CMMHAGAM_00880	6.38e-178	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CMMHAGAM_00881	2.88e-183	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
CMMHAGAM_00882	2.59e-253	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
CMMHAGAM_00883	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
CMMHAGAM_00884	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CMMHAGAM_00885	3.4e-108	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
CMMHAGAM_00886	1.02e-260	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
CMMHAGAM_00887	1.08e-62	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
CMMHAGAM_00888	1.61e-64	ylxQ	-	-	J	-	-	-	ribosomal protein
CMMHAGAM_00889	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CMMHAGAM_00890	2.88e-80	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CMMHAGAM_00891	9.89e-200	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CMMHAGAM_00892	2.65e-223	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
CMMHAGAM_00893	2.56e-248	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
CMMHAGAM_00894	3.74e-109	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CMMHAGAM_00895	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
CMMHAGAM_00896	5.88e-278	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
CMMHAGAM_00897	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
CMMHAGAM_00898	5.5e-130	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
CMMHAGAM_00899	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
CMMHAGAM_00900	4.68e-121	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CMMHAGAM_00901	1.12e-65	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CMMHAGAM_00902	2.93e-75	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CMMHAGAM_00903	1.94e-135	galR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
CMMHAGAM_00911	1.11e-253	-	1.8.1.7	-	C	ko:K00383,ko:K21739	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulfide oxidoreductase
CMMHAGAM_00912	4.39e-268	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
CMMHAGAM_00913	0.000168	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
CMMHAGAM_00914	6.6e-53	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
CMMHAGAM_00915	6.04e-65	-	-	-	S	-	-	-	Metal binding domain of Ada
CMMHAGAM_00916	0.0	-	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
CMMHAGAM_00917	1.5e-177	lysR5	-	-	K	-	-	-	LysR substrate binding domain
CMMHAGAM_00918	4.52e-302	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
CMMHAGAM_00919	7.44e-51	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CMMHAGAM_00920	5.49e-47	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CMMHAGAM_00921	1.25e-140	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
CMMHAGAM_00922	9.06e-125	citX	2.7.7.61	-	HI	ko:K05964	ko02020,map02020	ko00000,ko00001,ko01000	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
CMMHAGAM_00923	4.37e-287	-	-	-	S	-	-	-	Sterol carrier protein domain
CMMHAGAM_00924	4.04e-29	-	-	-	-	-	-	-	-
CMMHAGAM_00925	1.03e-141	-	-	-	K	-	-	-	LysR substrate binding domain
CMMHAGAM_00926	6.82e-128	-	-	-	-	-	-	-	-
CMMHAGAM_00927	2.92e-153	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
CMMHAGAM_00928	1.31e-158	-	-	-	-	-	-	-	-
CMMHAGAM_00929	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
CMMHAGAM_00930	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
CMMHAGAM_00931	1.84e-92	-	-	-	-	-	-	-	-
CMMHAGAM_00932	8.71e-31	-	-	-	G	-	-	-	Ribose/Galactose Isomerase
CMMHAGAM_00933	1.32e-92	-	-	-	K	-	-	-	sequence-specific DNA binding
CMMHAGAM_00934	2.96e-55	-	-	-	S	-	-	-	SnoaL-like domain
CMMHAGAM_00935	0.0	-	-	-	L	-	-	-	PLD-like domain
CMMHAGAM_00936	1.32e-130	yrgI	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Histidine phosphatase superfamily (branch 1)
CMMHAGAM_00937	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
CMMHAGAM_00938	0.0	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase
CMMHAGAM_00939	5.96e-283	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
CMMHAGAM_00940	2.62e-203	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
CMMHAGAM_00941	7.77e-151	-	-	-	-	-	-	-	-
CMMHAGAM_00942	5.11e-208	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CMMHAGAM_00944	6.57e-141	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CMMHAGAM_00945	1.71e-150	-	-	-	S	-	-	-	Peptidase family M23
CMMHAGAM_00946	1.05e-131	-	-	-	-	-	-	-	-
CMMHAGAM_00947	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	E1-E2 ATPase
CMMHAGAM_00948	5.51e-46	-	-	-	C	-	-	-	Heavy-metal-associated domain
CMMHAGAM_00949	3.97e-125	dpsB	-	-	P	-	-	-	Belongs to the Dps family
CMMHAGAM_00950	2.61e-147	fnr	-	-	K	ko:K21562	-	ko00000,ko03000	Transcriptional regulator, Crp Fnr family
CMMHAGAM_00952	2.18e-96	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CMMHAGAM_00953	1.93e-116	ymdB	-	-	S	-	-	-	Macro domain protein
CMMHAGAM_00954	1.87e-288	mdtG2	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
CMMHAGAM_00955	9.28e-224	-	-	-	-	-	-	-	-
CMMHAGAM_00956	2.2e-79	lysM	-	-	M	-	-	-	LysM domain
CMMHAGAM_00957	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
CMMHAGAM_00958	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
CMMHAGAM_00959	1.15e-34	-	-	-	S	-	-	-	Sugar efflux transporter for intercellular exchange
CMMHAGAM_00960	6.23e-102	-	-	-	K	-	-	-	LytTr DNA-binding domain
CMMHAGAM_00961	5.74e-167	-	-	-	S	-	-	-	membrane
CMMHAGAM_00962	1.83e-309	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
CMMHAGAM_00963	4.34e-22	-	-	-	-	-	-	-	-
CMMHAGAM_00964	5.56e-255	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
CMMHAGAM_00965	2.25e-202	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
CMMHAGAM_00966	6.91e-151	-	-	-	-	-	-	-	-
CMMHAGAM_00967	6.15e-185	XK27_08125	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
CMMHAGAM_00968	3.42e-181	-	-	-	S	ko:K06889	-	ko00000	Alpha/beta hydrolase family
CMMHAGAM_00969	1.66e-144	-	-	-	G	-	-	-	phosphoglycerate mutase
CMMHAGAM_00970	7.8e-124	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CMMHAGAM_00971	6.08e-233	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
CMMHAGAM_00972	2.12e-132	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CMMHAGAM_00973	1.75e-126	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
CMMHAGAM_00974	4.3e-197	mccB	4.4.1.1, 4.4.1.2, 4.4.1.8	-	E	ko:K01760,ko:K17217	ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
CMMHAGAM_00975	1.6e-197	metB	2.5.1.48	-	E	ko:K01739	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Cys/Met metabolism PLP-dependent enzyme
CMMHAGAM_00976	0.0	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CMMHAGAM_00977	6.73e-51	-	-	-	-	-	-	-	-
CMMHAGAM_00978	7.51e-145	-	-	-	K	-	-	-	WHG domain
CMMHAGAM_00979	3.41e-125	azo1	1.5.1.36, 1.7.1.6	-	S	ko:K03206,ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
CMMHAGAM_00980	2.58e-126	azr	1.5.1.36	-	S	ko:K22394	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
CMMHAGAM_00981	1.57e-192	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
CMMHAGAM_00982	5.24e-230	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
CMMHAGAM_00984	4.24e-75	cvpA	-	-	S	-	-	-	Colicin V production protein
CMMHAGAM_00985	3.14e-167	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
CMMHAGAM_00986	7.14e-192	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
CMMHAGAM_00987	4.99e-178	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
CMMHAGAM_00988	6.08e-197	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
CMMHAGAM_00989	1.1e-59	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
CMMHAGAM_00990	6.88e-257	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
CMMHAGAM_00991	3.93e-176	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
CMMHAGAM_00992	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter, ATP-binding protein
CMMHAGAM_00993	0.0	ndvA	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
CMMHAGAM_00994	8.32e-157	vanR	-	-	K	-	-	-	response regulator
CMMHAGAM_00995	1.32e-270	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
CMMHAGAM_00996	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CMMHAGAM_00997	9.1e-185	racD	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
CMMHAGAM_00998	2.07e-71	-	-	-	S	-	-	-	Enterocin A Immunity
CMMHAGAM_00999	1.95e-45	-	-	-	-	-	-	-	-
CMMHAGAM_01000	1.07e-35	-	-	-	-	-	-	-	-
CMMHAGAM_01001	4.48e-34	-	-	-	-	-	-	-	-
CMMHAGAM_01002	0.0	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
CMMHAGAM_01003	0.0	agl	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
CMMHAGAM_01004	8.52e-21	-	-	-	-	-	-	-	-
CMMHAGAM_01005	8.18e-89	-	-	-	-	-	-	-	-
CMMHAGAM_01007	4.43e-272	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
CMMHAGAM_01008	1.16e-11	-	-	-	-	-	-	-	-
CMMHAGAM_01009	1.07e-265	-	-	-	S	-	-	-	CAAX protease self-immunity
CMMHAGAM_01011	4.62e-258	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
CMMHAGAM_01012	3.83e-184	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
CMMHAGAM_01013	5.59e-41	-	-	-	-	-	-	-	-
CMMHAGAM_01014	1.65e-83	-	-	-	-	-	-	-	-
CMMHAGAM_01015	7.44e-40	-	-	-	-	-	-	-	-
CMMHAGAM_01016	2.2e-89	-	-	-	M	-	-	-	Glycosyl transferase family 2
CMMHAGAM_01020	6.57e-253	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
CMMHAGAM_01021	2.34e-31	-	-	-	-	-	-	-	-
CMMHAGAM_01022	1.73e-109	-	-	-	-	-	-	-	-
CMMHAGAM_01023	2.58e-41	-	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
CMMHAGAM_01024	7.23e-32	-	-	-	-	-	-	-	-
CMMHAGAM_01025	1.19e-88	-	-	-	-	-	-	-	-
CMMHAGAM_01026	1.01e-12	-	-	-	-	-	-	-	-
CMMHAGAM_01027	2.18e-41	-	-	-	-	-	-	-	-
CMMHAGAM_01028	5.12e-211	natA	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CMMHAGAM_01029	9.07e-279	natB	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
CMMHAGAM_01030	3.14e-175	fruR	-	-	K	ko:K03436	-	ko00000,ko03000	DeoR C terminal sensor domain
CMMHAGAM_01031	2.18e-215	pfkB	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family. LacC subfamily
CMMHAGAM_01032	0.0	fruA	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase System
CMMHAGAM_01033	4.47e-56	-	-	-	K	ko:K21903	-	ko00000,ko03000	helix_turn_helix, Arsenical Resistance Operon Repressor
CMMHAGAM_01034	1.25e-188	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
CMMHAGAM_01035	1.63e-152	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
CMMHAGAM_01036	2.63e-171	znuB	-	-	U	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
CMMHAGAM_01037	0.0	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
CMMHAGAM_01038	2.6e-31	-	-	-	K	-	-	-	Transcriptional regulator
CMMHAGAM_01041	8.89e-95	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
CMMHAGAM_01042	1.24e-100	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
CMMHAGAM_01046	8.05e-87	-	-	-	S	ko:K07052	-	ko00000	CAAX amino terminal protease
CMMHAGAM_01047	6.85e-165	-	-	-	S	ko:K07052	-	ko00000	CAAX amino terminal protease
CMMHAGAM_01049	4.47e-113	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
CMMHAGAM_01050	1.27e-271	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
CMMHAGAM_01051	3.84e-09	-	-	-	S	-	-	-	Enterocin A Immunity
CMMHAGAM_01052	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
CMMHAGAM_01053	1.39e-277	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
CMMHAGAM_01054	2.8e-160	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
CMMHAGAM_01055	9.4e-128	-	-	-	-	-	-	-	-
CMMHAGAM_01056	4.4e-132	rimL	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
CMMHAGAM_01057	4.03e-82	-	-	-	-	-	-	-	-
CMMHAGAM_01058	0.0	-	-	-	S	-	-	-	ABC transporter
CMMHAGAM_01059	3.12e-50	-	-	-	S	-	-	-	Putative threonine/serine exporter
CMMHAGAM_01060	7.22e-107	-	-	-	S	-	-	-	Putative threonine/serine exporter
CMMHAGAM_01061	7.36e-109	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
CMMHAGAM_01062	3.18e-143	-	-	-	S	-	-	-	Peptidase_C39 like family
CMMHAGAM_01063	4.73e-101	-	-	-	-	-	-	-	-
CMMHAGAM_01064	9.74e-227	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CMMHAGAM_01065	1.17e-101	nrdI	-	-	F	ko:K03647	-	ko00000	NrdI Flavodoxin like
CMMHAGAM_01066	8.77e-144	-	-	-	-	-	-	-	-
CMMHAGAM_01067	0.0	-	-	-	S	-	-	-	O-antigen ligase like membrane protein
CMMHAGAM_01068	4.7e-58	-	-	-	-	-	-	-	-
CMMHAGAM_01069	5.02e-123	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase homologues.
CMMHAGAM_01070	2.67e-124	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
CMMHAGAM_01071	1.28e-174	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
CMMHAGAM_01072	1.73e-167	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
CMMHAGAM_01073	3.01e-54	-	-	-	-	-	-	-	-
CMMHAGAM_01075	1.53e-224	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
CMMHAGAM_01076	8.93e-290	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CMMHAGAM_01078	9.52e-56	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
CMMHAGAM_01079	2.09e-63	yoeB	-	-	S	ko:K19158	-	ko00000,ko01000,ko02048	YoeB-like toxin of bacterial type II toxin-antitoxin system
CMMHAGAM_01080	3.61e-244	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
CMMHAGAM_01081	4.06e-189	epsB	-	-	M	-	-	-	biosynthesis protein
CMMHAGAM_01082	3.54e-163	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
CMMHAGAM_01083	3.16e-184	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
CMMHAGAM_01084	1.23e-144	epsE2	-	-	M	-	-	-	Bacterial sugar transferase
CMMHAGAM_01085	4.72e-199	cps4F	-	-	M	-	-	-	Glycosyl transferases group 1
CMMHAGAM_01086	6.33e-79	-	-	GT2	S	ko:K12990	ko02024,ko02025,map02024,map02025	ko00000,ko00001,ko01000,ko01003,ko01005	Glycosyl transferase family 2
CMMHAGAM_01087	1.45e-60	rgpB	-	GT2	M	ko:K12997	-	ko00000,ko01000,ko01003,ko01005	Glycosyltransferase, group 2 family protein
CMMHAGAM_01088	2.38e-58	-	-	GT2	S	ko:K12990	ko02024,ko02025,map02024,map02025	ko00000,ko00001,ko01000,ko01003,ko01005	Glycosyl transferase family group 2
CMMHAGAM_01089	2.03e-14	-	-	-	M	-	-	-	Glycosyl transferase, group 2 family
CMMHAGAM_01090	4.3e-65	-	-	-	M	-	-	-	Psort location Cytoplasmic, score
CMMHAGAM_01092	1.92e-263	glf	5.4.99.9	-	M	ko:K01854	ko00052,ko00520,map00052,map00520	ko00000,ko00001,ko01000	UDP-galactopyranose mutase
CMMHAGAM_01093	0.0	cps1C	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
CMMHAGAM_01095	2.88e-75	-	-	-	S	-	-	-	Acyltransferase family
CMMHAGAM_01096	9.53e-70	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
CMMHAGAM_01097	1.9e-74	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
CMMHAGAM_01099	2.93e-154	-	-	-	L	-	-	-	Transposase
CMMHAGAM_01100	7.2e-278	-	-	-	L	-	-	-	Transposase
CMMHAGAM_01101	5.34e-134	-	-	-	-	-	-	-	-
CMMHAGAM_01103	1.14e-175	-	-	-	-	-	-	-	-
CMMHAGAM_01104	1.09e-272	pmrA	-	-	EGP	ko:K08161	-	ko00000,ko02000	MFS_1 like family
CMMHAGAM_01105	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
CMMHAGAM_01106	1.51e-117	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CMMHAGAM_01107	9.57e-303	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
CMMHAGAM_01108	2.68e-48	-	-	-	-	-	-	-	-
CMMHAGAM_01109	9.72e-190	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
CMMHAGAM_01110	1.03e-96	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CMMHAGAM_01111	0.0	-	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
CMMHAGAM_01112	1.52e-119	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CMMHAGAM_01113	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
CMMHAGAM_01118	1.42e-122	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CMMHAGAM_01119	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CMMHAGAM_01120	1.18e-255	flp	-	-	V	-	-	-	Beta-lactamase
CMMHAGAM_01121	2.79e-309	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
CMMHAGAM_01122	4.03e-186	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
CMMHAGAM_01123	1.46e-75	-	-	-	-	-	-	-	-
CMMHAGAM_01124	2.61e-148	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
CMMHAGAM_01125	9.65e-220	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
CMMHAGAM_01126	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CMMHAGAM_01127	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
CMMHAGAM_01128	5.42e-67	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CMMHAGAM_01129	6.25e-268	camS	-	-	S	-	-	-	sex pheromone
CMMHAGAM_01130	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CMMHAGAM_01131	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
CMMHAGAM_01132	3.29e-127	acmA	3.2.1.17, 3.2.1.96	-	NU	ko:K01185,ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	mannosyl-glycoprotein
CMMHAGAM_01134	1.11e-110	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
CMMHAGAM_01135	1.91e-173	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
CMMHAGAM_01136	0.0	epsU	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
CMMHAGAM_01137	1.3e-286	-	-	-	M	-	-	-	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
CMMHAGAM_01138	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
CMMHAGAM_01139	6.65e-196	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
CMMHAGAM_01140	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CMMHAGAM_01141	1.77e-262	-	-	-	M	-	-	-	Glycosyl transferases group 1
CMMHAGAM_01142	5.23e-172	tagA	2.4.1.187	GT26	F	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
CMMHAGAM_01143	3.68e-93	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Glycerol-3-phosphate cytidylyltransferase
CMMHAGAM_01144	1.87e-159	gntR1	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
CMMHAGAM_01145	7.57e-233	-	-	-	-	-	-	-	-
CMMHAGAM_01146	0.0	oppA2	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CMMHAGAM_01147	3.7e-281	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CMMHAGAM_01148	6.02e-44	-	-	-	K	-	-	-	Transcriptional
CMMHAGAM_01150	2.45e-27	-	-	-	-	-	-	-	-
CMMHAGAM_01153	4.29e-64	-	-	-	-	-	-	-	-
CMMHAGAM_01154	0.0	-	-	-	S	ko:K06919	-	ko00000	Virulence-associated protein E
CMMHAGAM_01158	7.01e-82	-	-	-	-	-	-	-	-
CMMHAGAM_01161	7.62e-306	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	NADH oxidase
CMMHAGAM_01162	1.48e-14	-	-	-	-	-	-	-	-
CMMHAGAM_01163	6.39e-32	-	-	-	S	-	-	-	transposase or invertase
CMMHAGAM_01164	3.35e-309	slpX	-	-	S	-	-	-	SLAP domain
CMMHAGAM_01165	5.82e-186	-	-	-	K	-	-	-	SIS domain
CMMHAGAM_01166	6.34e-156	rpiA1	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
CMMHAGAM_01167	2.16e-239	XK27_10475	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
CMMHAGAM_01168	8.3e-98	araT	2.6.1.57	-	E	ko:K00832,ko:K00841	ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
CMMHAGAM_01169	2.33e-162	araT	2.6.1.57	-	E	ko:K00832,ko:K00841	ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
CMMHAGAM_01170	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
CMMHAGAM_01172	1.8e-146	glpQ1	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
CMMHAGAM_01173	2.79e-146	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
CMMHAGAM_01174	1.64e-129	-	-	-	G	-	-	-	Histidine phosphatase superfamily (branch 1)
CMMHAGAM_01175	8.92e-136	-	-	-	G	-	-	-	Phosphoglycerate mutase family
CMMHAGAM_01176	8.07e-211	-	-	-	D	-	-	-	nuclear chromosome segregation
CMMHAGAM_01177	1.44e-130	-	-	-	M	-	-	-	LysM domain protein
CMMHAGAM_01178	4.06e-37	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CMMHAGAM_01179	9.19e-71	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CMMHAGAM_01180	1.25e-17	-	-	-	-	-	-	-	-
CMMHAGAM_01181	1.95e-220	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase
CMMHAGAM_01182	2.54e-42	-	-	-	-	-	-	-	-
CMMHAGAM_01184	1.09e-91	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
CMMHAGAM_01185	4.39e-145	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
CMMHAGAM_01186	2.84e-80	psiE	-	-	S	ko:K13256	-	ko00000	Phosphate-starvation-inducible E
CMMHAGAM_01188	9.44e-184	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
CMMHAGAM_01189	1.59e-78	-	-	-	-	-	-	-	-
CMMHAGAM_01190	0.0	-	-	-	L	ko:K03724	-	ko00000,ko01000,ko03400	DEAD DEAH box helicase
CMMHAGAM_01191	0.0	-	-	-	P	-	-	-	P-loop Domain of unknown function (DUF2791)
CMMHAGAM_01192	0.0	-	-	-	S	-	-	-	TerB-C domain
CMMHAGAM_01193	0.0	pckA	4.1.1.49	-	H	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Phosphoenolpyruvate carboxykinase
CMMHAGAM_01194	3.03e-76	apfA	3.6.1.61	-	F	ko:K18445	ko00230,map00230	ko00000,ko00001,ko01000	Nudix hydrolase
CMMHAGAM_01195	1.66e-42	-	-	-	-	-	-	-	-
CMMHAGAM_01196	1.23e-170	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
CMMHAGAM_01197	1.98e-279	mtlD	1.1.1.17	-	C	ko:K00009	ko00051,map00051	ko00000,ko00001,ko01000	mannitol-1-phosphate 5-dehydrogenase activity
CMMHAGAM_01198	5.75e-103	mtlF	2.7.1.197	-	G	ko:K02798	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CMMHAGAM_01199	0.0	mtlA	2.7.1.197	-	G	ko:K02799,ko:K02800	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
CMMHAGAM_01200	0.0	mtlR	-	-	K	ko:K03483	-	ko00000,ko03000	Mga helix-turn-helix domain
CMMHAGAM_01201	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
CMMHAGAM_01202	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
CMMHAGAM_01203	1.44e-311	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
CMMHAGAM_01204	1.56e-115	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
CMMHAGAM_01205	2.94e-203	-	-	-	K	-	-	-	Transcriptional regulator
CMMHAGAM_01206	2.76e-83	-	-	-	S	-	-	-	Domain of unknown function (DUF956)
CMMHAGAM_01207	3.51e-222	manN	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	system, mannose fructose sorbose family IID component
CMMHAGAM_01208	3.23e-179	manY	-	-	G	ko:K02746,ko:K02795	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system
CMMHAGAM_01209	3.31e-237	manL	2.7.1.191	-	G	ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
CMMHAGAM_01212	1.6e-58	-	-	-	-	-	-	-	-
CMMHAGAM_01213	0.0	cas3	-	-	L	ko:K07012	-	ko00000,ko01000,ko02048	CRISPR-associated helicase cas3
CMMHAGAM_01214	0.0	casA	-	-	L	ko:K19123	-	ko00000,ko02048	the current gene model (or a revised gene model) may contain a frame shift
CMMHAGAM_01215	1.85e-142	-	-	-	S	ko:K19046	-	ko00000,ko02048	CRISPR-associated protein Cse2 (CRISPR_cse2)
CMMHAGAM_01216	2.78e-253	casC	-	-	L	ko:K19124	-	ko00000,ko02048	CT1975-like protein
CMMHAGAM_01217	6.1e-170	casD	-	-	S	ko:K19125	-	ko00000,ko02048	CRISPR-associated protein (Cas_Cas5)
CMMHAGAM_01218	9.47e-158	casE	-	-	S	ko:K19126	-	ko00000,ko02048	CRISPR_assoc
CMMHAGAM_01219	2.88e-221	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
CMMHAGAM_01220	9.23e-214	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR-associated protein (Cas_Cas2CT1978)
CMMHAGAM_01221	6.94e-199	yqfL	2.7.11.33, 2.7.4.28	-	F	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
CMMHAGAM_01222	4.83e-30	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
CMMHAGAM_01223	3.75e-93	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
CMMHAGAM_01224	1.74e-224	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
CMMHAGAM_01225	3.58e-129	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CMMHAGAM_01226	1.6e-215	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CMMHAGAM_01227	1.05e-175	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
CMMHAGAM_01228	9.03e-229	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
CMMHAGAM_01229	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
CMMHAGAM_01230	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
CMMHAGAM_01231	9e-255	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
CMMHAGAM_01232	1.51e-166	-	-	-	S	-	-	-	Peptidase family M23
CMMHAGAM_01233	1.54e-105	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
CMMHAGAM_01234	1.19e-160	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
CMMHAGAM_01235	6.95e-197	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CMMHAGAM_01236	2.45e-308	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
CMMHAGAM_01237	1.25e-80	lexA	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator, GntR family
CMMHAGAM_01238	7.68e-161	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
CMMHAGAM_01239	1.17e-155	-	-	-	-	-	-	-	-
CMMHAGAM_01240	2.56e-134	-	-	-	-	-	-	-	-
CMMHAGAM_01241	4.74e-151	-	-	-	-	-	-	-	-
CMMHAGAM_01242	1.98e-52	ybjQ	-	-	S	-	-	-	Belongs to the UPF0145 family
CMMHAGAM_01243	4.24e-37	-	-	-	-	-	-	-	-
CMMHAGAM_01244	3.65e-133	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
CMMHAGAM_01245	2.41e-185	-	-	-	-	-	-	-	-
CMMHAGAM_01246	1.72e-212	-	-	-	-	-	-	-	-
CMMHAGAM_01247	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
CMMHAGAM_01248	1.28e-150	-	3.1.3.102, 3.1.3.104, 3.1.3.23	-	G	ko:K07757,ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sucrose-6F-phosphate phosphohydrolase
CMMHAGAM_01249	4.17e-237	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
CMMHAGAM_01250	6.67e-261	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
CMMHAGAM_01251	1.01e-228	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
CMMHAGAM_01252	2.59e-174	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	GHMP kinases N terminal domain
CMMHAGAM_01253	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
CMMHAGAM_01254	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
CMMHAGAM_01255	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
CMMHAGAM_01256	4.08e-117	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
CMMHAGAM_01257	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
CMMHAGAM_01258	6.91e-149	dnaD	-	-	L	ko:K02086	-	ko00000	DnaD domain protein
CMMHAGAM_01259	1.92e-148	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CMMHAGAM_01260	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
CMMHAGAM_01261	8.47e-152	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
CMMHAGAM_01262	1.18e-139	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
CMMHAGAM_01263	1.85e-90	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
CMMHAGAM_01264	5.87e-278	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
CMMHAGAM_01265	6.74e-309	cpdA	-	-	S	-	-	-	Calcineurin-like phosphoesterase
CMMHAGAM_01266	9.67e-104	-	-	-	-	-	-	-	-
CMMHAGAM_01267	9.91e-150	-	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Ham1 family
CMMHAGAM_01268	7.18e-47	-	-	-	-	-	-	-	-
CMMHAGAM_01269	4.13e-83	-	-	-	-	-	-	-	-
CMMHAGAM_01272	7.5e-160	-	-	-	-	-	-	-	-
CMMHAGAM_01273	4.83e-136	pncA	-	-	Q	-	-	-	Isochorismatase family
CMMHAGAM_01274	1.24e-08	-	-	-	-	-	-	-	-
CMMHAGAM_01275	1.49e-50	-	-	-	-	-	-	-	-
CMMHAGAM_01277	0.0	snf	-	-	KL	-	-	-	domain protein
CMMHAGAM_01278	9.25e-300	snf	-	-	KL	-	-	-	domain protein
CMMHAGAM_01279	9.39e-141	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
CMMHAGAM_01280	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
CMMHAGAM_01281	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
CMMHAGAM_01282	9.08e-234	-	-	-	K	-	-	-	Transcriptional regulator
CMMHAGAM_01283	5.18e-222	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
CMMHAGAM_01284	2.45e-146	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CMMHAGAM_01285	5.03e-76	-	-	-	K	-	-	-	Helix-turn-helix domain
CMMHAGAM_01286	6.59e-160	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
CMMHAGAM_01287	7.55e-53	-	-	-	S	-	-	-	Transglycosylase associated protein
CMMHAGAM_01288	4.08e-270	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CMMHAGAM_01289	4.36e-142	XK27_00160	-	-	S	-	-	-	Domain of unknown function (DUF5052)
CMMHAGAM_01290	3.03e-90	-	-	-	-	-	-	-	-
CMMHAGAM_01291	6.14e-259	xerS	-	-	L	ko:K03733	-	ko00000,ko03036	Belongs to the 'phage' integrase family
CMMHAGAM_01292	0.0	mutS1	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
CMMHAGAM_01293	8.12e-205	-	-	-	S	-	-	-	EDD domain protein, DegV family
CMMHAGAM_01294	2.06e-88	-	-	-	-	-	-	-	-
CMMHAGAM_01295	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
CMMHAGAM_01296	0.0	carB1	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
CMMHAGAM_01297	3.39e-254	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
CMMHAGAM_01298	9.3e-221	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
CMMHAGAM_01299	6.39e-102	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CMMHAGAM_01300	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
CMMHAGAM_01301	1.61e-70	-	-	-	-	-	-	-	-
CMMHAGAM_01302	2.66e-197	psd	4.1.1.65	-	I	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the phosphatidylserine decarboxylase family
CMMHAGAM_01303	7.87e-221	-	-	-	D	-	-	-	nuclear chromosome segregation
CMMHAGAM_01305	2.66e-125	-	-	-	D	-	-	-	nuclear chromosome segregation
CMMHAGAM_01307	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
CMMHAGAM_01308	4.41e-11	-	-	-	K	-	-	-	Helix-turn-helix
CMMHAGAM_01309	5.57e-135	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
CMMHAGAM_01310	3.96e-292	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
CMMHAGAM_01311	4.35e-198	msmR	-	-	K	-	-	-	AraC-like ligand binding domain
CMMHAGAM_01312	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CMMHAGAM_01313	4.9e-95	-	-	-	K	-	-	-	acetyltransferase
CMMHAGAM_01314	1.89e-312	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CMMHAGAM_01315	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
CMMHAGAM_01316	4.63e-92	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
CMMHAGAM_01317	7.59e-89	-	-	-	S	-	-	-	Domain of unknown function (DUF1934)
CMMHAGAM_01318	0.0	-	-	-	S	ko:K06885	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
CMMHAGAM_01319	2.08e-57	-	-	-	-	-	-	-	-
CMMHAGAM_01320	3.1e-216	-	-	-	GK	-	-	-	ROK family
CMMHAGAM_01321	1.09e-225	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CMMHAGAM_01322	0.0	-	-	-	S	-	-	-	SLAP domain
CMMHAGAM_01323	5.52e-113	-	-	-	-	-	-	-	-
CMMHAGAM_01324	7.68e-309	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CMMHAGAM_01325	6.12e-192	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
CMMHAGAM_01326	1.72e-53	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
CMMHAGAM_01327	2.33e-205	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
CMMHAGAM_01328	5.17e-129	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
CMMHAGAM_01329	7.48e-187	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
CMMHAGAM_01330	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CMMHAGAM_01331	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
CMMHAGAM_01332	3.22e-135	-	-	-	S	ko:K06872	-	ko00000	TPM domain
CMMHAGAM_01333	4.29e-116	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	MafB19-like deaminase
CMMHAGAM_01334	6.74e-244	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
CMMHAGAM_01335	7.04e-145	-	-	-	E	-	-	-	Belongs to the SOS response-associated peptidase family
CMMHAGAM_01337	1.43e-144	-	-	-	-	-	-	-	-
CMMHAGAM_01338	5.69e-100	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
CMMHAGAM_01339	3.4e-93	hsp	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
CMMHAGAM_01340	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
CMMHAGAM_01341	6.54e-222	oppF	-	-	P	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CMMHAGAM_01342	1.74e-252	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CMMHAGAM_01343	6.71e-241	oppC	-	-	EP	ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CMMHAGAM_01344	1.34e-191	oppB	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CMMHAGAM_01345	4.39e-267	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
CMMHAGAM_01346	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CMMHAGAM_01347	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CMMHAGAM_01348	2.62e-159	ypgQ	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
CMMHAGAM_01349	0.0	pepC2	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
CMMHAGAM_01351	3.98e-72	-	-	-	-	-	-	-	-
CMMHAGAM_01352	1.27e-309	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CMMHAGAM_01353	0.0	-	-	-	S	-	-	-	Fibronectin type III domain
CMMHAGAM_01354	0.0	XK27_08315	-	-	M	-	-	-	Sulfatase
CMMHAGAM_01355	1.03e-145	plsY1	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
CMMHAGAM_01356	2.06e-258	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
CMMHAGAM_01357	1.22e-126	-	-	-	G	-	-	-	Aldose 1-epimerase
CMMHAGAM_01358	4.51e-171	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CMMHAGAM_01359	6.81e-172	-	-	-	-	-	-	-	-
CMMHAGAM_01360	8.33e-186	-	-	-	-	-	-	-	-
CMMHAGAM_01361	6.61e-230	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
CMMHAGAM_01362	1.57e-150	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
CMMHAGAM_01363	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
CMMHAGAM_01364	5.97e-265	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
CMMHAGAM_01365	1.41e-284	-	-	-	NU	-	-	-	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
CMMHAGAM_01366	3.24e-119	-	-	-	-	-	-	-	-
CMMHAGAM_01370	6.65e-135	-	-	-	S	-	-	-	SLAP domain
CMMHAGAM_01371	2.47e-250	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
CMMHAGAM_01372	4.33e-95	-	-	-	-	-	-	-	-
CMMHAGAM_01374	9.28e-113	-	-	-	K	-	-	-	DNA-templated transcription, initiation
CMMHAGAM_01376	1.46e-69	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CMMHAGAM_01377	2.46e-29	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CMMHAGAM_01378	1.32e-178	-	-	-	S	-	-	-	SLAP domain
CMMHAGAM_01379	2.56e-55	-	-	-	S	-	-	-	Protein of unknown function (DUF2922)
CMMHAGAM_01380	1.21e-40	-	-	-	-	-	-	-	-
CMMHAGAM_01381	2.77e-25	-	-	-	-	-	-	-	-
CMMHAGAM_01383	3.75e-48	-	-	-	S	-	-	-	PFAM Archaeal ATPase
CMMHAGAM_01384	2.36e-94	-	-	-	-	-	-	-	-
CMMHAGAM_01385	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
CMMHAGAM_01386	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
CMMHAGAM_01387	8.05e-278	yqjV	-	-	EGP	-	-	-	Major Facilitator Superfamily
CMMHAGAM_01388	4.2e-221	-	-	-	-	-	-	-	-
CMMHAGAM_01389	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
CMMHAGAM_01390	3.76e-128	yobS	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CMMHAGAM_01391	6.6e-206	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
CMMHAGAM_01392	1.4e-207	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
CMMHAGAM_01393	2.47e-309	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
CMMHAGAM_01394	0.0	-	-	-	S	-	-	-	Zn-dependent metallo-hydrolase RNA specificity domain
CMMHAGAM_01395	5.62e-187	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CMMHAGAM_01396	1.64e-202	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	ABC-type sugar transport systems, permease components
CMMHAGAM_01397	6.14e-258	malK	-	-	P	ko:K10112,ko:K17240	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
CMMHAGAM_01398	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CMMHAGAM_01399	7.24e-204	endA	-	-	F	ko:K15051	-	ko00000	DNA RNA non-specific endonuclease
CMMHAGAM_01400	9.05e-231	-	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	EXOIII
CMMHAGAM_01401	8.83e-204	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CMMHAGAM_01402	6.39e-150	yviA	-	-	S	-	-	-	Protein of unknown function (DUF421)
CMMHAGAM_01403	1.3e-94	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
CMMHAGAM_01404	2.82e-182	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
CMMHAGAM_01406	2.46e-170	-	-	-	S	-	-	-	PAS domain
CMMHAGAM_01407	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
CMMHAGAM_01408	2.7e-230	pepR	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
CMMHAGAM_01409	2.9e-167	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
CMMHAGAM_01410	1.87e-316	-	-	-	T	-	-	-	GHKL domain
CMMHAGAM_01411	7.04e-115	ykoJ	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
CMMHAGAM_01412	7.47e-134	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
CMMHAGAM_01413	1.15e-125	XK27_03150	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
CMMHAGAM_01414	2.43e-100	yybA	-	-	K	-	-	-	Transcriptional regulator
CMMHAGAM_01415	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CMMHAGAM_01416	6.29e-82	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
CMMHAGAM_01417	1.59e-131	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
CMMHAGAM_01418	5.16e-135	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CMMHAGAM_01419	2.03e-220	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
CMMHAGAM_01420	1.13e-126	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
CMMHAGAM_01421	2.34e-97	yjcF	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
CMMHAGAM_01422	1.43e-183	aatB	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
CMMHAGAM_01423	8.38e-137	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
CMMHAGAM_01424	1.81e-140	yecS_2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
CMMHAGAM_01425	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
CMMHAGAM_01426	1.51e-150	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
CMMHAGAM_01427	2.16e-162	gpm2	-	-	G	-	-	-	Phosphoglycerate mutase family
CMMHAGAM_01428	1.87e-308	-	-	-	S	-	-	-	response to antibiotic
CMMHAGAM_01429	8.07e-164	-	-	-	-	-	-	-	-
CMMHAGAM_01430	0.0	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
CMMHAGAM_01431	6.28e-87	-	2.7.1.191	-	G	ko:K02793	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
CMMHAGAM_01432	6.6e-14	-	-	-	-	-	-	-	-
CMMHAGAM_01433	4.71e-239	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase, type I
CMMHAGAM_01434	1.43e-176	-	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
CMMHAGAM_01435	0.0	malH	3.2.1.122	GH4	G	ko:K01232	ko00500,map00500	ko00000,ko00001,ko01000	Family 4 glycosyl hydrolase C-terminal domain
CMMHAGAM_01436	1.64e-55	-	-	-	-	-	-	-	-
CMMHAGAM_01437	1.36e-110	-	-	-	-	-	-	-	-
CMMHAGAM_01438	3.32e-13	-	-	-	-	-	-	-	-
CMMHAGAM_01439	1.44e-116	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
CMMHAGAM_01440	2.37e-136	-	-	-	K	ko:K06977	-	ko00000	acetyltransferase
CMMHAGAM_01442	7.37e-60	-	-	-	S	-	-	-	polysaccharide biosynthetic process
CMMHAGAM_01443	4.76e-137	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
CMMHAGAM_01444	0.0	XK27_00340	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
CMMHAGAM_01445	1.57e-95	-	-	-	L	-	-	-	Transposase DDE domain
CMMHAGAM_01447	1.22e-181	-	-	-	-	-	-	-	-
CMMHAGAM_01448	7.21e-150	-	-	-	S	-	-	-	Protein of unknown function (DUF3232)
CMMHAGAM_01449	2.43e-220	ptcC1	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CMMHAGAM_01450	7.85e-277	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CMMHAGAM_01451	6.7e-107	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA domain
CMMHAGAM_01452	5.79e-14	-	-	-	-	-	-	-	-
CMMHAGAM_01453	5.24e-85	-	-	-	-	-	-	-	-
CMMHAGAM_01454	4.15e-207	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
CMMHAGAM_01456	3.79e-100	-	-	-	S	-	-	-	Bacteriophage abortive infection AbiH
CMMHAGAM_01457	6.79e-139	-	-	-	GKT	ko:K03491	-	ko00000,ko03000	Mga helix-turn-helix domain
CMMHAGAM_01458	6.71e-306	bglH	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CMMHAGAM_01459	6.59e-37	-	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIA subunit
CMMHAGAM_01460	4.98e-161	-	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CMMHAGAM_01461	3.65e-47	licB2	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
CMMHAGAM_01462	4.26e-163	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
CMMHAGAM_01464	2.68e-73	-	-	-	I	ko:K01066	-	ko00000,ko01000	Hydrolase, alpha beta domain protein
CMMHAGAM_01465	5.03e-214	pts30BCA	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CMMHAGAM_01466	2.08e-54	-	-	-	K	-	-	-	transcriptional antiterminator
CMMHAGAM_01468	2.23e-27	-	-	-	-	-	-	-	-
CMMHAGAM_01469	9.36e-229	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
CMMHAGAM_01470	2.86e-151	rfbC	5.1.3.13	-	M	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
CMMHAGAM_01471	2.08e-208	rfbA	2.7.7.24	-	H	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CMMHAGAM_01472	3.71e-264	rfbB	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
CMMHAGAM_01473	5.81e-286	-	-	-	KQ	-	-	-	helix_turn_helix, mercury resistance
CMMHAGAM_01474	1.28e-69	-	-	-	-	ko:K19157	-	ko00000,ko01000,ko02048	-
CMMHAGAM_01475	1.23e-57	-	-	-	S	ko:K07473	-	ko00000,ko02048	RelB antitoxin
CMMHAGAM_01477	5.71e-58	-	-	-	-	-	-	-	-
CMMHAGAM_01478	1.89e-89	-	-	-	-	-	-	-	-
CMMHAGAM_01480	3.24e-06	-	-	-	L	-	-	-	Transposase
CMMHAGAM_01481	1.38e-107	-	-	-	J	-	-	-	FR47-like protein
CMMHAGAM_01482	3.37e-50	-	-	-	S	-	-	-	Cytochrome B5
CMMHAGAM_01483	2.27e-214	arbZ	-	-	I	-	-	-	Phosphate acyltransferases
CMMHAGAM_01484	3.7e-233	-	-	-	M	-	-	-	Glycosyl transferase family 8
CMMHAGAM_01485	4.7e-237	-	-	-	M	-	-	-	Glycosyl transferase family 8
CMMHAGAM_01486	7.53e-203	arbx	-	-	M	-	-	-	Glycosyl transferase family 8
CMMHAGAM_01487	3.58e-193	-	-	-	I	-	-	-	Acyl-transferase
CMMHAGAM_01489	6.33e-46	-	-	-	-	-	-	-	-
CMMHAGAM_01491	3.98e-169	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
CMMHAGAM_01492	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
CMMHAGAM_01493	0.0	yycH	-	-	S	-	-	-	YycH protein
CMMHAGAM_01494	7.44e-192	yycI	-	-	S	-	-	-	YycH protein
CMMHAGAM_01495	2.4e-188	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
CMMHAGAM_01496	2.87e-227	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
CMMHAGAM_01497	8.64e-107	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CMMHAGAM_01498	1.68e-44	-	-	-	G	-	-	-	Peptidase_C39 like family
CMMHAGAM_01499	1.31e-208	-	-	-	M	-	-	-	NlpC/P60 family
CMMHAGAM_01500	2.34e-115	-	-	-	G	-	-	-	Peptidase_C39 like family
CMMHAGAM_01501	1.05e-221	pepI	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
CMMHAGAM_01502	2.28e-112	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
CMMHAGAM_01503	0.0	-	-	-	S	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CMMHAGAM_01504	1.05e-222	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
CMMHAGAM_01505	2.98e-136	-	-	-	K	-	-	-	Helix-turn-helix domain
CMMHAGAM_01506	1.63e-112	-	-	-	-	-	-	-	-
CMMHAGAM_01507	3e-05	-	-	-	-	-	-	-	-
CMMHAGAM_01508	4.19e-100	-	-	-	M	-	-	-	LysM domain
CMMHAGAM_01509	1.97e-105	-	-	-	-	-	-	-	-
CMMHAGAM_01510	1.41e-208	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
CMMHAGAM_01511	2.03e-125	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
CMMHAGAM_01512	1.52e-245	ysdE	-	-	P	-	-	-	Citrate transporter
CMMHAGAM_01513	1.36e-91	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
CMMHAGAM_01514	0.0	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
CMMHAGAM_01515	9.69e-25	-	-	-	-	-	-	-	-
CMMHAGAM_01516	6.1e-166	-	-	-	-	-	-	-	-
CMMHAGAM_01517	2.77e-10	-	-	-	-	-	-	-	-
CMMHAGAM_01518	4.29e-205	-	-	-	M	-	-	-	Glycosyl transferase
CMMHAGAM_01519	2.11e-53	-	-	-	M	-	-	-	Glycosyl transferase
CMMHAGAM_01520	3.67e-225	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
CMMHAGAM_01521	1.11e-154	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
CMMHAGAM_01522	1.1e-200	-	-	-	L	-	-	-	HNH nucleases
CMMHAGAM_01523	3.92e-185	yhaH	-	-	S	-	-	-	Protein of unknown function (DUF805)
CMMHAGAM_01524	3.38e-172	glnQ	-	-	E	ko:K17076	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CMMHAGAM_01525	0.0	XK27_05795	-	-	P	ko:K17073,ko:K17074	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CMMHAGAM_01526	1.41e-155	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
CMMHAGAM_01527	3.78e-85	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
CMMHAGAM_01528	5.93e-167	terC	-	-	P	-	-	-	Integral membrane protein TerC family
CMMHAGAM_01529	2.16e-120	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	6-O-methylguanine DNA methyltransferase, DNA binding domain
CMMHAGAM_01530	4.22e-115	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
CMMHAGAM_01531	5.2e-34	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
CMMHAGAM_01532	5.61e-113	-	-	-	-	-	-	-	-
CMMHAGAM_01533	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CMMHAGAM_01534	2.14e-233	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
CMMHAGAM_01535	5.07e-190	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CMMHAGAM_01536	9.18e-187	-	-	-	S	-	-	-	Protein of unknown function (DUF1002)
CMMHAGAM_01537	3.29e-193	epsV	-	-	S	-	-	-	glycosyl transferase family 2
CMMHAGAM_01538	3.19e-165	-	-	-	S	-	-	-	Alpha/beta hydrolase family
CMMHAGAM_01539	2.91e-189	-	-	-	K	-	-	-	Helix-turn-helix domain
CMMHAGAM_01541	1.9e-79	-	-	-	-	-	-	-	-
CMMHAGAM_01543	1.07e-17	-	-	-	S	-	-	-	YcaO cyclodehydratase, ATP-ad Mg2+-binding
CMMHAGAM_01544	3.02e-276	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
CMMHAGAM_01545	1.29e-179	noxC	1.5.1.39	-	C	ko:K19286	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	coenzyme F420-1:gamma-L-glutamate ligase activity
CMMHAGAM_01546	8.73e-234	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CMMHAGAM_01547	8.37e-161	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CMMHAGAM_01548	1.11e-177	-	-	-	-	-	-	-	-
CMMHAGAM_01549	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
CMMHAGAM_01550	1.23e-171	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CMMHAGAM_01551	4.45e-292	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
CMMHAGAM_01552	7.15e-256	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
CMMHAGAM_01553	2.07e-160	-	-	-	-	-	-	-	-
CMMHAGAM_01554	1.69e-258	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
CMMHAGAM_01555	3.17e-166	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
CMMHAGAM_01556	7.57e-207	-	-	-	I	-	-	-	alpha/beta hydrolase fold
CMMHAGAM_01557	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 31 family
CMMHAGAM_01558	1.53e-277	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CMMHAGAM_01559	0.0	-	-	-	S	ko:K06921	-	ko00000	Archaea bacterial proteins of unknown function
CMMHAGAM_01561	4.83e-117	ntd	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside
CMMHAGAM_01562	1.94e-115	-	2.7.1.200, 2.7.1.204	-	G	ko:K02773,ko:K20112	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CMMHAGAM_01563	1.45e-190	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
CMMHAGAM_01564	2.66e-110	usp5	-	-	T	-	-	-	universal stress protein
CMMHAGAM_01565	4.65e-206	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphonate ABC transporter
CMMHAGAM_01566	5.59e-174	phnC	3.6.3.28	-	P	ko:K02041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
CMMHAGAM_01567	5.6e-162	phnB	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CMMHAGAM_01568	1.83e-190	-	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CMMHAGAM_01569	1.38e-138	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
CMMHAGAM_01570	3e-108	-	-	-	-	-	-	-	-
CMMHAGAM_01571	0.0	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
CMMHAGAM_01572	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
CMMHAGAM_01573	0.0	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
CMMHAGAM_01574	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Ribonucleoside-triphosphate reductase
CMMHAGAM_01575	1.35e-180	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CMMHAGAM_01576	2.18e-132	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
CMMHAGAM_01577	4.42e-292	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
CMMHAGAM_01580	4.05e-211	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
CMMHAGAM_01583	8.87e-288	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CMMHAGAM_01584	0.0	mdr	-	-	EGP	-	-	-	Major Facilitator
CMMHAGAM_01585	1.92e-102	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
CMMHAGAM_01586	1.96e-153	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
CMMHAGAM_01587	1.14e-152	-	-	-	S	-	-	-	Putative esterase
CMMHAGAM_01588	5.19e-270	-	2.7.1.211	-	G	ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CMMHAGAM_01589	1.76e-237	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
CMMHAGAM_01590	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
CMMHAGAM_01591	6.19e-239	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome d ubiquinol oxidase subunit II
CMMHAGAM_01592	0.0	cydC	-	-	CO	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
CMMHAGAM_01593	0.0	cydD	-	-	CO	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CMMHAGAM_01594	3.54e-165	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
CMMHAGAM_01595	7.96e-226	hepT	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
CMMHAGAM_01596	1.77e-207	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
CMMHAGAM_01597	1.49e-294	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
CMMHAGAM_01598	1.66e-117	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CMMHAGAM_01599	1.66e-216	-	-	-	K	-	-	-	LysR substrate binding domain
CMMHAGAM_01600	9.81e-157	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
CMMHAGAM_01601	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
CMMHAGAM_01602	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
CMMHAGAM_01603	1.1e-98	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
CMMHAGAM_01605	6.41e-105	-	-	-	S	-	-	-	Cupin domain
CMMHAGAM_01606	7.44e-59	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
CMMHAGAM_01607	6.75e-60	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
CMMHAGAM_01608	6.13e-138	pncA	-	-	Q	-	-	-	Isochorismatase family
CMMHAGAM_01609	0.0	nadC2	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CMMHAGAM_01610	1.39e-167	-	-	-	F	-	-	-	NUDIX domain
CMMHAGAM_01611	1.25e-63	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain
CMMHAGAM_01613	9.64e-307	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
CMMHAGAM_01614	1.83e-196	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CMMHAGAM_01615	2.9e-131	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
CMMHAGAM_01616	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
CMMHAGAM_01617	4.24e-217	fba	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-1,6-bisphosphate aldolase, class II
CMMHAGAM_01618	1.05e-106	-	-	-	L	-	-	-	NUDIX domain
CMMHAGAM_01619	1.88e-106	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	UbiA prenyltransferase family
CMMHAGAM_01620	4.23e-21	-	-	-	-	-	-	-	-
CMMHAGAM_01621	1.91e-116	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
CMMHAGAM_01622	3.23e-174	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
CMMHAGAM_01623	1.77e-143	-	-	-	-	-	-	-	-
CMMHAGAM_01625	4.1e-120	-	-	-	-	-	-	-	-
CMMHAGAM_01627	1.22e-173	yecA	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
CMMHAGAM_01628	2.2e-308	-	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CMMHAGAM_01629	1.26e-233	-	-	-	S	-	-	-	PFAM Archaeal ATPase
CMMHAGAM_01630	4.09e-249	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
CMMHAGAM_01631	2.35e-162	citG	2.4.2.52	-	H	ko:K05966	ko02020,map02020	ko00000,ko00001,ko01000	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
CMMHAGAM_01632	6.65e-183	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
CMMHAGAM_01633	7.87e-144	-	-	-	G	-	-	-	Phosphoglycerate mutase family
CMMHAGAM_01634	0.0	pps	2.7.9.2	-	H	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
CMMHAGAM_01635	8.5e-208	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
CMMHAGAM_01636	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
CMMHAGAM_01637	8.43e-73	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
CMMHAGAM_01638	4.13e-296	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
CMMHAGAM_01639	0.0	yhaN	-	-	L	-	-	-	AAA domain
CMMHAGAM_01640	3.33e-241	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
CMMHAGAM_01641	0.0	-	-	-	-	-	-	-	-
CMMHAGAM_01642	5.74e-96	eda	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	KDPG and KHG aldolase
CMMHAGAM_01643	2.2e-196	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
CMMHAGAM_01644	1.2e-41	-	-	-	-	-	-	-	-
CMMHAGAM_01645	4.63e-101	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
CMMHAGAM_01646	3.67e-174	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CMMHAGAM_01647	1.34e-280	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
CMMHAGAM_01648	2.16e-163	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
CMMHAGAM_01650	1.35e-71	ytpP	-	-	CO	-	-	-	Thioredoxin
CMMHAGAM_01651	8.78e-157	XK27_10290	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
CMMHAGAM_01652	4.47e-312	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
CMMHAGAM_01653	2.21e-162	hemH	4.99.1.1, 4.99.1.9	-	H	ko:K01772	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the ferrous insertion into protoporphyrin IX
CMMHAGAM_01654	6.39e-230	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
CMMHAGAM_01657	1.3e-104	ytsP	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
CMMHAGAM_01658	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
CMMHAGAM_01659	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CMMHAGAM_01660	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CMMHAGAM_01661	7.71e-157	comC	3.4.23.43	-	NOU	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	Bacterial Peptidase A24 N-terminal domain
CMMHAGAM_01662	1.47e-91	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CMMHAGAM_01663	1.39e-106	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
CMMHAGAM_01664	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CMMHAGAM_01665	6.34e-66	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
CMMHAGAM_01666	6.64e-146	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CMMHAGAM_01667	4.68e-138	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
CMMHAGAM_01668	1.14e-63	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
CMMHAGAM_01669	4.01e-198	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CMMHAGAM_01670	1.14e-62	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CMMHAGAM_01671	9.07e-73	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CMMHAGAM_01672	8.7e-157	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CMMHAGAM_01673	1.66e-100	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CMMHAGAM_01674	1.45e-34	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
CMMHAGAM_01675	1.56e-55	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CMMHAGAM_01676	3.62e-79	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CMMHAGAM_01677	3.03e-44	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CMMHAGAM_01678	1.23e-123	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CMMHAGAM_01679	1e-39	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CMMHAGAM_01680	7.94e-90	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CMMHAGAM_01681	7.18e-121	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CMMHAGAM_01682	4.84e-73	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CMMHAGAM_01683	3.73e-110	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CMMHAGAM_01684	2.22e-34	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
CMMHAGAM_01685	4.95e-93	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
CMMHAGAM_01686	3.59e-301	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
CMMHAGAM_01687	3.7e-155	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
CMMHAGAM_01688	3.13e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CMMHAGAM_01689	1.89e-21	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
CMMHAGAM_01690	2.07e-73	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CMMHAGAM_01691	3.82e-82	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CMMHAGAM_01692	3.62e-218	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CMMHAGAM_01693	2.23e-80	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
CMMHAGAM_01694	4.16e-198	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CMMHAGAM_01695	6.7e-203	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CMMHAGAM_01696	1.13e-177	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CMMHAGAM_01697	3.57e-193	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
CMMHAGAM_01698	3.22e-103	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CMMHAGAM_01699	1.18e-86	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
CMMHAGAM_01700	1.57e-201	-	-	-	M	-	-	-	Belongs to the glycosyl hydrolase 28 family
CMMHAGAM_01701	6.48e-104	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CMMHAGAM_01702	1.17e-137	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
CMMHAGAM_01703	5.45e-153	-	3.8.1.2	-	S	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
CMMHAGAM_01704	4.97e-170	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
CMMHAGAM_01705	3.84e-161	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
CMMHAGAM_01706	5.08e-207	-	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
CMMHAGAM_01707	2.42e-33	-	-	-	-	-	-	-	-
CMMHAGAM_01708	2.31e-162	gpmA1	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CMMHAGAM_01709	1.99e-235	-	-	-	S	-	-	-	AAA domain
CMMHAGAM_01710	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
CMMHAGAM_01711	8.27e-52	-	-	-	-	-	-	-	-
CMMHAGAM_01712	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
CMMHAGAM_01713	7.79e-70	-	-	-	-	-	-	-	-
CMMHAGAM_01714	5.22e-131	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
CMMHAGAM_01715	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CMMHAGAM_01716	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CMMHAGAM_01717	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
CMMHAGAM_01718	8.55e-99	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
CMMHAGAM_01719	2.69e-178	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CMMHAGAM_01720	3.81e-123	comX	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	Belongs to the sigma-70 factor family
CMMHAGAM_01721	1.19e-45	-	-	-	-	-	-	-	-
CMMHAGAM_01722	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
CMMHAGAM_01723	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CMMHAGAM_01724	3.73e-33	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
CMMHAGAM_01725	3.01e-131	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
CMMHAGAM_01726	2.69e-90	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CMMHAGAM_01727	1.05e-160	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
CMMHAGAM_01728	5.48e-201	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
CMMHAGAM_01729	1.19e-212	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
CMMHAGAM_01730	1.82e-198	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
CMMHAGAM_01731	5.24e-187	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CMMHAGAM_01732	4.66e-179	pstB1	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CMMHAGAM_01733	2.89e-151	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
CMMHAGAM_01734	1.07e-218	-	-	-	S	-	-	-	Bacteriocin helveticin-J
CMMHAGAM_01735	6.67e-259	-	-	-	S	-	-	-	SLAP domain
CMMHAGAM_01736	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
CMMHAGAM_01737	3.87e-97	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
CMMHAGAM_01738	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
CMMHAGAM_01739	2.36e-218	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, phosphonate, periplasmic substrate-binding protein
CMMHAGAM_01740	7.35e-221	degV1	-	-	S	-	-	-	DegV family
CMMHAGAM_01741	1.73e-215	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
CMMHAGAM_01742	3.81e-18	-	-	-	S	-	-	-	CsbD-like
CMMHAGAM_01743	7.89e-32	-	-	-	S	-	-	-	Transglycosylase associated protein
CMMHAGAM_01744	8.37e-298	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
CMMHAGAM_01745	5.81e-155	-	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
CMMHAGAM_01747	6.37e-39	-	-	-	-	-	-	-	-
CMMHAGAM_01749	1.57e-189	-	-	-	S	-	-	-	Putative ABC-transporter type IV
CMMHAGAM_01750	6.52e-104	-	-	-	S	-	-	-	Cob(I)alamin adenosyltransferase
CMMHAGAM_01751	2.32e-20	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
CMMHAGAM_01752	1.57e-16	-	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
CMMHAGAM_01753	0.0	-	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
CMMHAGAM_01754	1.3e-179	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CMMHAGAM_01755	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CMMHAGAM_01756	7.28e-225	ydbI	-	-	K	-	-	-	AI-2E family transporter
CMMHAGAM_01757	1.67e-135	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
CMMHAGAM_01758	2.55e-26	-	-	-	-	-	-	-	-
CMMHAGAM_01759	1.59e-315	-	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
CMMHAGAM_01760	2.48e-175	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CMMHAGAM_01761	3.9e-167	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
CMMHAGAM_01762	2.88e-224	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
CMMHAGAM_01763	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
CMMHAGAM_01764	1.99e-194	-	-	-	K	-	-	-	Helix-turn-helix domain
CMMHAGAM_01765	1.98e-172	ysaA	3.1.3.5, 3.8.1.2	-	S	ko:K01560,ko:K07025,ko:K08723	ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
CMMHAGAM_01766	4.53e-205	-	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
CMMHAGAM_01767	6.43e-203	yvgN	-	-	C	-	-	-	Aldo keto reductase
CMMHAGAM_01768	0.0	fusA1	-	-	J	-	-	-	elongation factor G
CMMHAGAM_01769	3.85e-193	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	haloacid dehalogenase-like hydrolase
CMMHAGAM_01770	1.45e-31	-	-	-	-	-	-	-	-
CMMHAGAM_01771	0.000118	-	-	-	-	-	-	-	-
CMMHAGAM_01773	4.58e-181	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
CMMHAGAM_01774	9.62e-247	ldhA	1.1.1.28	-	C	ko:K03778,ko:K18347	ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01504	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CMMHAGAM_01775	1.44e-07	-	-	-	S	-	-	-	YSIRK type signal peptide
CMMHAGAM_01777	2.08e-203	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
CMMHAGAM_01778	0.0	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
CMMHAGAM_01779	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
CMMHAGAM_01780	1.36e-260	pbpX	-	-	V	-	-	-	Beta-lactamase
CMMHAGAM_01781	6.35e-291	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
CMMHAGAM_01782	1.77e-93	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
CMMHAGAM_01783	9.4e-232	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
CMMHAGAM_01784	4.62e-95	-	-	-	C	-	-	-	Aldo keto reductase
CMMHAGAM_01785	5.61e-124	-	-	-	M	-	-	-	LysM domain protein
CMMHAGAM_01786	5.49e-197	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
CMMHAGAM_01787	9.28e-89	crcB1	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CMMHAGAM_01788	1.25e-85	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CMMHAGAM_01789	4.91e-17	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
CMMHAGAM_01790	3.73e-146	ybgF	-	-	E	ko:K02205,ko:K03293,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
CMMHAGAM_01791	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
CMMHAGAM_01792	9.58e-122	-	-	-	C	-	-	-	Pyridoxamine 5'-phosphate oxidase
CMMHAGAM_01793	0.0	-	-	-	E	-	-	-	Amino acid permease
CMMHAGAM_01794	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
CMMHAGAM_01795	1.81e-313	ynbB	-	-	P	-	-	-	aluminum resistance
CMMHAGAM_01796	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
CMMHAGAM_01797	8.83e-107	-	-	-	C	-	-	-	Flavodoxin
CMMHAGAM_01798	5.11e-134	uvrA2	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC, A subunit
CMMHAGAM_01799	0.0	uvrA2	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC, A subunit
CMMHAGAM_01800	2.25e-241	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
CMMHAGAM_01801	1.15e-145	-	-	-	I	-	-	-	Acid phosphatase homologues
CMMHAGAM_01802	3.21e-104	yvbK	-	-	K	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
CMMHAGAM_01803	1.36e-150	maa3	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
CMMHAGAM_01804	7.55e-258	pbpX1	-	-	V	-	-	-	Beta-lactamase
CMMHAGAM_01805	9.3e-129	pdxK	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
CMMHAGAM_01806	7.89e-124	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
CMMHAGAM_01807	1.13e-291	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
CMMHAGAM_01808	2.34e-107	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CMMHAGAM_01809	0.0	yqjE	3.4.11.14, 3.4.11.4	-	E	ko:K01258,ko:K01263	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
CMMHAGAM_01810	3.95e-242	-	-	-	L	ko:K07478	-	ko00000	AAA C-terminal domain
CMMHAGAM_01811	4.58e-85	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
CMMHAGAM_01812	0.0	treB	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CMMHAGAM_01813	5.32e-128	treR	-	-	K	ko:K03486	-	ko00000,ko03000	UTRA
CMMHAGAM_01814	0.0	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
CMMHAGAM_01816	5.52e-302	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
CMMHAGAM_01817	4.09e-80	-	-	-	S	ko:K07006	-	ko00000	Pyridoxamine 5'-phosphate oxidase
CMMHAGAM_01818	2.94e-302	XK27_01810	-	-	S	-	-	-	Calcineurin-like phosphoesterase
CMMHAGAM_01820	0.0	-	-	-	S	-	-	-	SLAP domain
CMMHAGAM_01821	0.0	-	-	-	L	-	-	-	Type III restriction enzyme, res subunit
CMMHAGAM_01823	1.54e-119	-	-	-	V	-	-	-	site-specific DNA-methyltransferase (adenine-specific) activity
CMMHAGAM_01824	4.93e-13	-	-	-	-	-	-	-	-
CMMHAGAM_01827	8.87e-106	-	-	-	S	-	-	-	HIRAN
CMMHAGAM_01828	7.25e-43	-	-	-	-	-	-	-	-
CMMHAGAM_01829	1.18e-229	-	-	-	-	-	-	-	-
CMMHAGAM_01830	2.88e-136	-	-	-	S	-	-	-	AAA domain
CMMHAGAM_01831	6.62e-102	-	-	-	S	ko:K07126	-	ko00000	Sel1-like repeats.
CMMHAGAM_01832	5.55e-80	psd	4.1.1.65	-	I	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the phosphatidylserine decarboxylase family
CMMHAGAM_01833	0.0	-	-	-	J	-	-	-	Elongation factor G, domain IV
CMMHAGAM_01834	2.25e-37	-	-	-	-	-	-	-	-
CMMHAGAM_01835	6.92e-215	scrR	-	-	K	ko:K02529,ko:K03484	-	ko00000,ko03000	Transcriptional regulator, LacI family
CMMHAGAM_01836	7.93e-298	scrB	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
CMMHAGAM_01837	0.0	scrA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CMMHAGAM_01838	2.14e-231	-	-	-	M	-	-	-	CHAP domain
CMMHAGAM_01839	3.25e-101	-	-	-	-	-	-	-	-
CMMHAGAM_01840	1.06e-58	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CMMHAGAM_01841	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
CMMHAGAM_01842	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CMMHAGAM_01843	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CMMHAGAM_01844	3.89e-132	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
CMMHAGAM_01845	4.87e-238	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
CMMHAGAM_01846	7.58e-69	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
CMMHAGAM_01847	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CMMHAGAM_01848	1.05e-275	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CMMHAGAM_01849	5.46e-232	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
CMMHAGAM_01850	5.36e-305	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
CMMHAGAM_01851	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CMMHAGAM_01852	5.32e-57	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
CMMHAGAM_01853	9.37e-96	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CMMHAGAM_01854	1.18e-66	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
CMMHAGAM_01855	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
CMMHAGAM_01856	2.19e-71	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
CMMHAGAM_01857	2.34e-76	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
CMMHAGAM_01858	5.62e-95	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
CMMHAGAM_01859	1.01e-186	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
CMMHAGAM_01860	4.9e-145	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CMMHAGAM_01861	1.74e-186	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
CMMHAGAM_01862	2.96e-23	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
CMMHAGAM_01863	3.09e-71	-	-	-	-	-	-	-	-
CMMHAGAM_01864	4.59e-272	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
CMMHAGAM_01865	1.5e-232	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
CMMHAGAM_01866	0.0	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
CMMHAGAM_01867	9.89e-74	-	-	-	-	-	-	-	-
CMMHAGAM_01868	0.0	sasH	3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45	-	F	ko:K01081,ko:K01119,ko:K07004,ko:K08693,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
CMMHAGAM_01869	6.48e-136	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
CMMHAGAM_01870	1.1e-184	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
CMMHAGAM_01871	2.15e-137	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
CMMHAGAM_01872	6.9e-150	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
CMMHAGAM_01873	4.33e-235	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
CMMHAGAM_01874	2.93e-234	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
CMMHAGAM_01875	5.03e-166	-	-	-	S	-	-	-	(CBS) domain
CMMHAGAM_01876	1.62e-276	alr	5.1.1.1, 5.1.1.5	-	E	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CMMHAGAM_01877	7.73e-79	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
CMMHAGAM_01878	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
CMMHAGAM_01879	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
CMMHAGAM_01880	1.07e-52	rpmE	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
CMMHAGAM_01881	0.0	dexB	3.2.1.70	-	G	ko:K01215	-	ko00000,ko01000	Alpha amylase, catalytic domain protein
CMMHAGAM_01882	4.71e-200	yhaX	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
CMMHAGAM_01883	0.0	-	-	-	E	-	-	-	amino acid
CMMHAGAM_01884	5.66e-297	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CMMHAGAM_01885	1.17e-56	-	-	-	-	-	-	-	-
CMMHAGAM_01886	1.05e-69	-	-	-	-	-	-	-	-
CMMHAGAM_01887	2.54e-237	-	-	-	C	-	-	-	FMN-dependent dehydrogenase
CMMHAGAM_01888	3.91e-184	-	-	-	P	-	-	-	Voltage gated chloride channel
CMMHAGAM_01889	0.0	-	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
CMMHAGAM_01890	1.59e-149	-	-	-	L	-	-	-	Resolvase, N-terminal
CMMHAGAM_01891	2.22e-20	-	-	-	P	-	-	-	Voltage gated chloride channel
CMMHAGAM_01892	3.74e-125	-	-	-	-	-	-	-	-
CMMHAGAM_01893	1.08e-123	ogt	2.1.1.63	-	L	ko:K00567	-	ko00000,ko01000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CMMHAGAM_01894	7.97e-252	qor	1.1.1.1, 1.6.5.5	-	C	ko:K00001,ko:K00344	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
CMMHAGAM_01895	1.6e-79	ydeP	-	-	K	-	-	-	Transcriptional regulator, HxlR family
CMMHAGAM_01896	1.24e-31	yjdF3	-	-	S	-	-	-	Protein of unknown function (DUF2992)
CMMHAGAM_01897	4.85e-75	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CMMHAGAM_01899	1.82e-05	-	-	-	-	-	-	-	-
CMMHAGAM_01900	4.71e-74	-	-	-	M	-	-	-	Rib/alpha-like repeat
CMMHAGAM_01901	2.42e-70	codA	-	-	F	-	-	-	Cytidine and deoxycytidylate deaminase zinc-binding region
CMMHAGAM_01902	9.2e-154	-	-	-	S	-	-	-	F420-0:Gamma-glutamyl ligase
CMMHAGAM_01903	3.85e-105	-	-	-	S	-	-	-	AAA domain
CMMHAGAM_01904	2.06e-183	-	-	-	F	-	-	-	Phosphorylase superfamily
CMMHAGAM_01905	1.2e-187	-	-	-	F	-	-	-	Phosphorylase superfamily
CMMHAGAM_01906	2.16e-193	-	2.3.1.81	-	V	ko:K00662	-	ko00000,ko01000,ko01504	Aminoglycoside 3-N-acetyltransferase
CMMHAGAM_01907	9.6e-106	-	-	-	E	-	-	-	amino acid
CMMHAGAM_01908	1.27e-109	yagE	-	-	E	-	-	-	Amino acid permease
CMMHAGAM_01909	2.75e-111	-	3.4.21.96	-	S	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	SLAP domain
CMMHAGAM_01910	8.13e-206	XK27_10395	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CMMHAGAM_01911	1.47e-286	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
CMMHAGAM_01912	1.8e-143	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
CMMHAGAM_01913	8.63e-191	degV3	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
CMMHAGAM_01914	9.85e-49	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
CMMHAGAM_01915	3.73e-218	nhaP4	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
CMMHAGAM_01916	4.52e-200	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CMMHAGAM_01917	4.08e-168	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CMMHAGAM_01918	5.24e-196	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
CMMHAGAM_01919	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CMMHAGAM_01920	1.42e-315	trmFO	2.1.1.74	-	J	ko:K04094	-	ko00000,ko01000,ko03016,ko03036	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
CMMHAGAM_01921	2.09e-180	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Phage integrase, N-terminal SAM-like domain
CMMHAGAM_01922	4.67e-116	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CMMHAGAM_01923	1.4e-313	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
CMMHAGAM_01924	1.58e-101	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
CMMHAGAM_01925	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
CMMHAGAM_01926	1.3e-40	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
CMMHAGAM_01927	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
CMMHAGAM_01928	8.57e-227	mprF	-	-	S	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CMMHAGAM_01929	9.03e-257	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
CMMHAGAM_01930	1.72e-286	-	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyl transferase 4-like domain
CMMHAGAM_01942	8.62e-121	-	-	-	-	-	-	-	-
CMMHAGAM_01943	8.6e-296	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
CMMHAGAM_01944	2.68e-96	-	-	-	KLT	-	-	-	serine threonine protein kinase
CMMHAGAM_01946	3.28e-126	-	-	-	-	-	-	-	-
CMMHAGAM_01948	1.19e-125	-	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	VirC1 protein
CMMHAGAM_01949	1.79e-18	int3	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CMMHAGAM_01950	3.04e-140	int3	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CMMHAGAM_01967	3.03e-273	-	-	-	M	-	-	-	Peptidase family M1 domain
CMMHAGAM_01968	2.55e-113	-	-	-	S	-	-	-	Alpha beta hydrolase
CMMHAGAM_01969	1.46e-240	-	-	-	S	-	-	-	Bacteriocin helveticin-J
CMMHAGAM_01970	1.33e-67	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
CMMHAGAM_01971	2.95e-187	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
CMMHAGAM_01972	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CMMHAGAM_01973	6.69e-200	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
CMMHAGAM_01974	2.16e-136	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CMMHAGAM_01975	1.29e-106	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CMMHAGAM_01976	0.0	dnaB2	-	-	L	ko:K03346	-	ko00000,ko03032	Replication initiation and membrane attachment
CMMHAGAM_01977	4.39e-214	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
CMMHAGAM_01978	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CMMHAGAM_01979	2.68e-110	-	-	-	-	-	-	-	-
CMMHAGAM_01980	1.19e-254	-	-	-	S	-	-	-	Domain of unknown function (DUF389)
CMMHAGAM_01981	1.57e-190	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CMMHAGAM_01982	9.12e-282	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CMMHAGAM_01983	1.11e-32	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CMMHAGAM_01984	1.57e-68	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CMMHAGAM_01985	2.43e-12	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CMMHAGAM_01986	4.17e-142	nanE	5.1.3.9	-	G	ko:K01788	ko00520,map00520	ko00000,ko00001,ko01000	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
CMMHAGAM_01987	5.57e-135	cah	3.1.1.41	-	Q	ko:K01060	ko00311,ko01130,map00311,map01130	ko00000,ko00001,ko01000	Acetyl xylan esterase (AXE1)
CMMHAGAM_01988	1.6e-279	-	-	-	E	ko:K03307	-	ko00000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CMMHAGAM_01989	1.48e-166	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
CMMHAGAM_01990	1.62e-71	-	-	-	G	-	-	-	Xylose isomerase domain protein TIM barrel
CMMHAGAM_01991	7.67e-115	nanK	-	-	GK	-	-	-	ROK family
CMMHAGAM_01992	9.27e-155	nanA	4.1.3.3	-	EM	ko:K01639	ko00520,map00520	ko00000,ko00001,ko01000	Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
CMMHAGAM_01993	5.54e-85	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
CMMHAGAM_01994	3.05e-173	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
CMMHAGAM_01995	3.55e-56	-	-	-	L	-	-	-	Helix-turn-helix domain
CMMHAGAM_01996	1.83e-57	-	-	-	L	-	-	-	Helix-turn-helix domain
CMMHAGAM_01997	4.81e-293	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
CMMHAGAM_01998	1.89e-134	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
CMMHAGAM_01999	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CMMHAGAM_02000	7.32e-46	yabO	-	-	J	-	-	-	S4 domain protein
CMMHAGAM_02001	7.52e-78	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
CMMHAGAM_02002	3.95e-82	-	-	-	J	ko:K07571	-	ko00000	S1 RNA binding domain
CMMHAGAM_02003	7.89e-307	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
CMMHAGAM_02004	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CMMHAGAM_02005	1.37e-214	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CMMHAGAM_02006	1.67e-249	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CMMHAGAM_02007	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
CMMHAGAM_02011	5.1e-85	-	-	-	S	-	-	-	2-Nitropropane dioxygenase
CMMHAGAM_02012	1.48e-148	-	-	-	K	-	-	-	Transcriptional regulator, LysR family
CMMHAGAM_02013	1.3e-300	-	-	-	I	-	-	-	Acyl-CoA dehydrogenase, C-terminal domain
CMMHAGAM_02014	4.74e-286	frc	2.8.3.16	-	C	ko:K07749	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
CMMHAGAM_02015	4.07e-236	-	1.3.8.1, 1.3.8.6	-	I	ko:K00248,ko:K00252,ko:K18244	ko00071,ko00280,ko00310,ko00362,ko00380,ko00650,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00071,map00280,map00310,map00362,map00380,map00650,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Acyl-CoA dehydrogenase, C-terminal domain
CMMHAGAM_02016	5.44e-67	-	-	-	C	-	-	-	Electron transfer flavoprotein domain
CMMHAGAM_02017	8.1e-107	etfA	-	-	C	ko:K03522	-	ko00000,ko04147	Electron transfer flavoprotein FAD-binding domain
CMMHAGAM_02018	2.54e-206	-	6.2.1.3, 6.2.1.48	-	H	ko:K00666,ko:K01897,ko:K02182	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
CMMHAGAM_02019	2e-40	-	-	-	I	-	-	-	Thioesterase superfamily
CMMHAGAM_02020	4.88e-65	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
CMMHAGAM_02021	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
CMMHAGAM_02022	1.66e-117	-	-	-	F	-	-	-	Nucleoside 2-deoxyribosyltransferase
CMMHAGAM_02023	3.44e-203	plcR	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
CMMHAGAM_02024	2.15e-195	-	-	-	I	-	-	-	alpha/beta hydrolase fold
CMMHAGAM_02025	3.2e-143	-	-	-	S	-	-	-	SNARE associated Golgi protein
CMMHAGAM_02026	1.23e-129	yjcK	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
CMMHAGAM_02027	0.0	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CMMHAGAM_02028	1.1e-135	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
CMMHAGAM_02029	4.93e-12	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
CMMHAGAM_02030	2.78e-291	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
CMMHAGAM_02031	1.43e-96	-	-	-	L	-	-	-	Transposase
CMMHAGAM_02032	2.12e-146	kbaY	4.1.2.13, 4.1.2.40	-	G	ko:K01624,ko:K08302	ko00010,ko00030,ko00051,ko00052,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00052,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-bisphosphate aldolase class-II
CMMHAGAM_02033	1.25e-173	manZ	-	-	G	ko:K02796,ko:K02815	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	system, mannose fructose sorbose family IID component
CMMHAGAM_02034	3.63e-150	-	-	-	U	ko:K02746,ko:K02795,ko:K02814	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sorbose-specific iic component
CMMHAGAM_02035	2.99e-92	-	2.7.1.206	-	G	ko:K02813	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
CMMHAGAM_02036	2.66e-59	-	2.7.1.206	-	G	ko:K02812	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
CMMHAGAM_02037	8.41e-169	srlD	1.1.1.140	-	IQ	ko:K00068	ko00051,map00051	ko00000,ko00001,ko01000	NAD dependent epimerase/dehydratase family
CMMHAGAM_02038	1.98e-151	-	-	-	K	-	-	-	sugar-binding domain protein
CMMHAGAM_02039	7.25e-268	-	-	-	E	ko:K19956	ko00051,map00051	ko00000,ko00001,ko01000	Alcohol dehydrogenase GroES-like domain
CMMHAGAM_02040	1.56e-139	-	-	-	S	-	-	-	membrane
CMMHAGAM_02041	2.78e-86	-	-	-	K	-	-	-	LytTr DNA-binding domain
CMMHAGAM_02042	9.09e-142	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
CMMHAGAM_02043	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
CMMHAGAM_02044	2.34e-147	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
CMMHAGAM_02045	6.47e-58	-	-	-	-	-	-	-	-
CMMHAGAM_02046	8.7e-87	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
CMMHAGAM_02047	1.38e-15	fhaB	-	-	M	ko:K15125,ko:K18491	ko04550,ko05133,map04550,map05133	ko00000,ko00001,ko00536,ko03000	translation initiation factor activity
CMMHAGAM_02048	8.63e-198	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
CMMHAGAM_02049	0.0	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
CMMHAGAM_02050	1.26e-141	-	-	-	G	-	-	-	Major Facilitator Superfamily
CMMHAGAM_02051	1.28e-134	-	-	-	K	-	-	-	Transcriptional regulator, LysR family
CMMHAGAM_02052	1.45e-204	aroE	1.1.1.25	-	E	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CMMHAGAM_02053	1.04e-139	aroD	4.2.1.10	-	E	ko:K03785	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
CMMHAGAM_02054	4.74e-34	-	-	-	S	-	-	-	PFAM Archaeal ATPase
CMMHAGAM_02055	1.53e-302	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
CMMHAGAM_02056	0.0	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
CMMHAGAM_02057	8.07e-50	-	-	-	L	-	-	-	COG3385 FOG Transposase and inactivated derivatives