ORF_ID e_value Gene_name EC_number CAZy COGs KEGG_ko KEGG_Pathway BRITE Description
PAMMCEDC_00001 0.0 - - - S - - - AAA ATPase domain
PAMMCEDC_00002 4.05e-209 - - - - - - - -
PAMMCEDC_00004 5e-180 - - - L - - - dead DEAH box helicase
PAMMCEDC_00006 0.0 - - - G - - - alpha-galactosidase
PAMMCEDC_00007 2.41e-188 - - - K - - - COG NOG38984 non supervised orthologous group
PAMMCEDC_00008 1.54e-142 - - - S - - - COG NOG23385 non supervised orthologous group
PAMMCEDC_00009 7.39e-286 - - - V - - - COG0534 Na -driven multidrug efflux pump
PAMMCEDC_00010 1.07e-202 - - - - - - - -
PAMMCEDC_00011 3.31e-162 aat 2.3.2.6 - O ko:K00684 - ko00000,ko01000 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
PAMMCEDC_00012 0.0 clpA - - O ko:K03694 - ko00000,ko03110 Belongs to the ClpA ClpB family
PAMMCEDC_00013 5.09e-63 clpS - - S ko:K06891 - ko00000 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
PAMMCEDC_00014 3.55e-164 - - - - - - - -
PAMMCEDC_00015 0.0 - - - G - - - Alpha-1,2-mannosidase
PAMMCEDC_00016 4.18e-128 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PAMMCEDC_00017 5.66e-231 - - - PT - - - COG3712 Fe2 -dicitrate sensor, membrane component
PAMMCEDC_00018 0.0 - - - G - - - Alpha-1,2-mannosidase
PAMMCEDC_00019 0.0 - - - G - - - Alpha-1,2-mannosidase
PAMMCEDC_00020 3.24e-57 - - - - - - - -
PAMMCEDC_00021 0.0 - - - P - - - Psort location OuterMembrane, score
PAMMCEDC_00022 0.0 - - - S - - - Susd and RagB outer membrane lipoprotein
PAMMCEDC_00023 1.86e-209 - - - S - - - Endonuclease Exonuclease phosphatase family
PAMMCEDC_00024 1.26e-82 - - - S - - - Protein of unknown function (DUF1016)
PAMMCEDC_00025 1.17e-144 - - - S - - - Protein of unknown function (DUF1016)
PAMMCEDC_00026 0.0 - 3.2.1.20 GH31 S ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 COG NOG06228 non supervised orthologous group
PAMMCEDC_00027 1.25e-315 ampG - - EGP ko:K08218 ko01501,map01501 ko00000,ko00001,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_00028 1.83e-267 - 2.4.1.319, 2.4.1.320 - G ko:K18785 - ko00000,ko01000 glycosylase
PAMMCEDC_00029 1.09e-21 - - - K - - - helix_turn_helix, arabinose operon control protein
PAMMCEDC_00030 6.08e-131 kefF - - S ko:K11748 - ko00000,ko02000 NADPH-quinone reductase (modulator of drug activity B)
PAMMCEDC_00031 6.54e-169 - - - IQ - - - KR domain
PAMMCEDC_00032 3.22e-213 akr5f - - S - - - aldo keto reductase family
PAMMCEDC_00033 2.25e-206 yvgN - - S - - - aldo keto reductase family
PAMMCEDC_00034 5.63e-225 - - - K - - - Transcriptional regulator
PAMMCEDC_00035 3.02e-316 - - - S - - - hydrolase activity, acting on glycosyl bonds
PAMMCEDC_00036 3.59e-109 - - - H - - - Outer membrane protein beta-barrel family
PAMMCEDC_00037 0.0 lacZ 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 COG3250 Beta-galactosidase beta-glucuronidase
PAMMCEDC_00038 1.49e-192 - - - J ko:K10716 - ko00000,ko02000 Transporter, cation channel family protein
PAMMCEDC_00039 5.51e-239 mltD_2 - - M - - - Transglycosylase SLT domain protein
PAMMCEDC_00040 1.01e-221 - - - K - - - Psort location Cytoplasmic, score 9.26
PAMMCEDC_00041 0.0 - - - T - - - adenylate cyclase carring two-component hybrid sensor and regulator domains
PAMMCEDC_00042 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_00043 7.34e-279 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_00044 0.0 - - - F ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_00045 0.0 - - - M - - - Parallel beta-helix repeats
PAMMCEDC_00046 1.72e-109 - - - S - - - COG NOG30135 non supervised orthologous group
PAMMCEDC_00047 1.94e-198 rhaD 4.1.2.19 - G ko:K01629 ko00040,ko00051,ko01120,map00040,map00051,map01120 ko00000,ko00001,ko01000 COG COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
PAMMCEDC_00048 1.41e-240 rhaT - - EG ko:K02856 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_00049 5.39e-314 rhaA 5.3.1.14 - G ko:K01813 ko00051,ko01120,map00051,map01120 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_00050 0.0 rhaB 2.7.1.5, 2.7.1.51 - G ko:K00848,ko:K00879 ko00040,ko00051,ko01120,map00040,map00051,map01120 ko00000,ko00001,ko01000 Involved in the catabolism of L-rhamnose (6-deoxy-L- mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate
PAMMCEDC_00051 7.39e-103 argR - - K ko:K03402 - ko00000,ko03000 Regulates arginine biosynthesis genes
PAMMCEDC_00052 7.69e-134 - - - E - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00053 1.27e-293 argG 6.3.4.5 - E ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 ko00000,ko00001,ko00002,ko01000,ko04147 argininosuccinate synthase
PAMMCEDC_00054 8.8e-240 argC 1.2.1.38 - E ko:K00145 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PAMMCEDC_00055 7.35e-272 argD 2.6.1.11, 2.6.1.17 - E ko:K00821 ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PAMMCEDC_00056 5.59e-174 proC 1.5.1.2 - E ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PAMMCEDC_00057 4.81e-225 - - - S - - - Metalloenzyme superfamily
PAMMCEDC_00058 0.0 - - - S ko:K07079 - ko00000 of the aldo keto reductase family
PAMMCEDC_00059 3.28e-36 yccM - - C - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_00060 7.36e-309 yccM - - C - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_00061 1.64e-94 - - - S - - - COG COG4771 Outer membrane receptor for ferrienterochelin and colicins
PAMMCEDC_00062 3.13e-75 nimB - - S ko:K07005 - ko00000 Pyridoxamine 5'-phosphate oxidase
PAMMCEDC_00063 1.81e-127 - - - K - - - Cupin domain protein
PAMMCEDC_00064 0.0 acsA 6.2.1.1, 6.2.1.32 - I ko:K01895,ko:K08295 ko00010,ko00620,ko00627,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00627,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko01004 Psort location Cytoplasmic, score
PAMMCEDC_00065 6.65e-104 - - - S - - - Dihydro-orotase-like
PAMMCEDC_00066 0.0 - - - S - - - Susd and RagB outer membrane lipoprotein
PAMMCEDC_00067 0.0 - - - P - - - Psort location OuterMembrane, score
PAMMCEDC_00069 4.24e-124 - - - - - - - -
PAMMCEDC_00070 0.0 - 3.1.3.1 - P ko:K01077 ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020 ko00000,ko00001,ko00002,ko00537,ko01000,ko04147 Belongs to the alkaline phosphatase family
PAMMCEDC_00071 3.22e-215 comEA - - L - - - COG COG1555 DNA uptake protein and related DNA-binding proteins
PAMMCEDC_00072 0.0 - - - P ko:K03308 - ko00000 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
PAMMCEDC_00073 1.28e-93 fjo27 - - S - - - Psort location CytoplasmicMembrane, score 9.46
PAMMCEDC_00074 4.75e-117 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PAMMCEDC_00075 0.0 - - - M - - - TonB-dependent receptor
PAMMCEDC_00076 1.5e-110 cyaA 4.6.1.1 - S ko:K01768 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_00077 3.57e-19 - - - - - - - -
PAMMCEDC_00078 3.46e-264 prfB - - J ko:K02836 - ko00000,ko03012 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PAMMCEDC_00079 0.0 fadD 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 AMP-binding enzyme
PAMMCEDC_00080 1.05e-254 argE 3.5.1.16 - E ko:K01438 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related
PAMMCEDC_00081 1.32e-197 - - - S - - - PD-(D/E)XK nuclease family transposase
PAMMCEDC_00082 1.46e-301 - - - C - - - Elongator protein 3, MiaB family, Radical SAM
PAMMCEDC_00083 3.09e-214 - - - - - - - -
PAMMCEDC_00084 3.02e-245 - - - D - - - Domain of unknown function
PAMMCEDC_00085 1.48e-104 - - - K - - - Helix-turn-helix domain
PAMMCEDC_00086 4.53e-305 waaA 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 M ko:K02527 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 Psort location Cytoplasmic, score 8.96
PAMMCEDC_00087 0.0 gltX 6.1.1.17 - J ko:K01885 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PAMMCEDC_00088 0.0 - - - S ko:K07037 - ko00000 7TM receptor with intracellular HD hydrolase
PAMMCEDC_00089 5.25e-111 ptpA 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PAMMCEDC_00090 3.04e-172 - - - E ko:K04477 - ko00000 PHP domain protein
PAMMCEDC_00091 0.0 priA - - L ko:K04066 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PAMMCEDC_00092 3.32e-141 - - - M - - - COG NOG27749 non supervised orthologous group
PAMMCEDC_00093 9.33e-48 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00094 1.43e-130 yvqK 2.5.1.17 - S ko:K00798 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 Conserved protein
PAMMCEDC_00095 2.35e-157 - - - S - - - COG NOG23394 non supervised orthologous group
PAMMCEDC_00096 0.0 - - - S - - - PS-10 peptidase S37
PAMMCEDC_00097 6.79e-59 - - - S - - - Cysteine-rich CWC
PAMMCEDC_00098 0.0 nrdD 1.1.98.6 - F ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Anaerobic ribonucleoside-triphosphate reductase
PAMMCEDC_00099 9.08e-116 nrdG 1.97.1.4 - O ko:K04068 - ko00000,ko01000 anaerobic ribonucleoside-triphosphate reductase activating protein
PAMMCEDC_00100 1.56e-301 - 4.99.1.3 - H ko:K02190 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko01000 Cobalt chelatase (CbiK)
PAMMCEDC_00101 0.0 - - - M ko:K16089 - ko00000,ko02000 COG4771 Outer membrane receptor for ferrienterochelin and colicins
PAMMCEDC_00102 0.0 - - - P ko:K16089 - ko00000,ko02000 COG4771 Outer membrane receptor for ferrienterochelin and colicins
PAMMCEDC_00103 0.0 - - - P ko:K07085 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_00104 0.0 cbiA 6.3.5.11, 6.3.5.9 - H ko:K02224 ko00860,ko01100,ko01120,map00860,map01100,map01120 ko00000,ko00001,ko01000 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source
PAMMCEDC_00105 6.54e-138 - - - S - - - ATP cob(I)alamin adenosyltransferase
PAMMCEDC_00106 0.0 cobQ 6.3.5.10 - H ko:K02232 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
PAMMCEDC_00107 3.78e-248 - 4.1.1.81 - E ko:K04720 ko00860,map00860 ko00000,ko00001,ko01000 COG0079 Histidinol-phosphate aromatic aminotransferase and cobyric acid decarboxylase
PAMMCEDC_00108 6.53e-220 cobD 6.3.1.10 - H ko:K02227 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
PAMMCEDC_00110 4.62e-145 - - - L - - - Phage integrase SAM-like domain
PAMMCEDC_00111 1e-38 - - - - - - - -
PAMMCEDC_00112 2.1e-31 - - - S ko:K19157 - ko00000,ko01000,ko02048 Bacterial toxin of type II toxin-antitoxin system, YafQ
PAMMCEDC_00113 2.41e-39 - - - - - - - -
PAMMCEDC_00114 7.96e-10 - - - S - - - HNH nucleases
PAMMCEDC_00115 1.08e-60 - - - - - - - -
PAMMCEDC_00116 6.46e-148 - - - N - - - Domain of unknown function (DUF4407)
PAMMCEDC_00117 4.41e-07 - - - - - - - -
PAMMCEDC_00123 7.45e-94 - - - K - - - BRO family, N-terminal domain
PAMMCEDC_00126 5.37e-10 - - - K - - - Transcriptional regulator
PAMMCEDC_00128 1.36e-20 - - - - - - - -
PAMMCEDC_00136 2.04e-39 - - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 single-stranded DNA binding
PAMMCEDC_00137 9.07e-120 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00138 4.18e-28 - - - - - - - -
PAMMCEDC_00139 8.8e-82 - - - - - - - -
PAMMCEDC_00144 3.05e-09 - - - - - - - -
PAMMCEDC_00147 6.44e-86 - - - - - - - -
PAMMCEDC_00148 1.42e-89 - 2.1.1.72 - L ko:K00571 - ko00000,ko01000,ko02048 DNA methylase
PAMMCEDC_00149 3.36e-69 - - - - - - - -
PAMMCEDC_00150 1.19e-200 - - - C - - - radical SAM domain protein
PAMMCEDC_00154 2.4e-24 - - - - - - - -
PAMMCEDC_00159 1.31e-20 - - - S - - - Protein of unknown function (DUF551)
PAMMCEDC_00171 1.61e-39 - - - - - - - -
PAMMCEDC_00172 1.2e-46 - - - KT - - - AAA domain
PAMMCEDC_00178 1.19e-58 - - - - - - - -
PAMMCEDC_00184 1.04e-15 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00188 2.41e-32 - - - S - - - HNH endonuclease
PAMMCEDC_00189 3.41e-31 - - - L - - - Resolvase, N terminal domain
PAMMCEDC_00191 1.12e-125 dinD - - S ko:K14623 - ko00000,ko03400 Psort location Cytoplasmic, score 8.96
PAMMCEDC_00192 9.75e-81 - - - - - - - -
PAMMCEDC_00193 5.23e-55 - - - - - - - -
PAMMCEDC_00195 3.26e-87 - - - - - - - -
PAMMCEDC_00196 5.38e-87 - - - - - - - -
PAMMCEDC_00197 9.05e-121 - - - - - - - -
PAMMCEDC_00199 1.08e-13 - - - - - - - -
PAMMCEDC_00200 3.73e-121 - - - S - - - Glycosyl hydrolase 108
PAMMCEDC_00201 1.12e-45 - - - - - - - -
PAMMCEDC_00202 1.77e-54 - - - S - - - tape measure
PAMMCEDC_00213 4.29e-42 - - - S - - - Terminase-like family
PAMMCEDC_00216 1.57e-305 - - - S - - - Phage minor structural protein
PAMMCEDC_00219 2.2e-06 - - - E ko:K20306 - ko00000,ko04131 lipolytic protein G-D-S-L family
PAMMCEDC_00220 0.0 - - - - - - - -
PAMMCEDC_00221 5.57e-115 - - - - - - - -
PAMMCEDC_00222 7.16e-132 - - - L - - - COG COG1961 Site-specific recombinases, DNA invertase Pin homologs
PAMMCEDC_00224 7.54e-126 - - - H - - - COG NOG08812 non supervised orthologous group
PAMMCEDC_00225 4.88e-128 nagH 3.2.1.187, 3.2.1.35 GH121 D ko:K01197,ko:K18206 ko00531,ko01100,map00531,map01100 ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042 nuclear chromosome segregation
PAMMCEDC_00226 2.2e-29 - - - - - - - -
PAMMCEDC_00227 1.13e-32 - - - S ko:K06921 - ko00000 ATPase (AAA superfamily)
PAMMCEDC_00228 8.52e-123 - - - S ko:K06921 - ko00000 ATPase (AAA superfamily)
PAMMCEDC_00230 7.46e-45 - - - - - - - -
PAMMCEDC_00231 5.96e-213 - - - S ko:K07133 - ko00000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_00232 0.0 - - - D - - - Domain of unknown function
PAMMCEDC_00234 1.81e-275 - - - S - - - Clostripain family
PAMMCEDC_00235 6e-265 - - - D - - - nuclear chromosome segregation
PAMMCEDC_00236 0.0 groL - - O ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PAMMCEDC_00238 3.71e-299 - - - V - - - COG0534 Na -driven multidrug efflux pump
PAMMCEDC_00239 2.02e-138 - - - T - - - - catabolite gene activator and regulatory subunit of cAMP-dependent protein
PAMMCEDC_00240 2.05e-126 cah 4.2.1.1 - P ko:K01673 ko00910,map00910 ko00000,ko00001,ko01000 Reversible hydration of carbon dioxide
PAMMCEDC_00241 0.0 - - - S - - - Oxidoreductase NAD-binding domain protein
PAMMCEDC_00242 3.42e-233 - - - S - - - Psort location Cytoplasmic, score
PAMMCEDC_00243 2.83e-172 - - - S - - - Pyridoxamine 5'-phosphate oxidase like
PAMMCEDC_00244 8.16e-148 - - - S - - - DJ-1/PfpI family
PAMMCEDC_00245 1.56e-103 - - - - - - - -
PAMMCEDC_00246 3.49e-123 - - - I - - - NUDIX domain
PAMMCEDC_00247 0.0 hutH 4.3.1.3 - E ko:K01745 ko00340,ko01100,map00340,map01100 ko00000,ko00001,ko00002,ko01000 Histidine ammonia-lyase
PAMMCEDC_00248 6.11e-135 fchA - - E - - - COG3404 Methenyl tetrahydrofolate cyclohydrolase
PAMMCEDC_00249 4.51e-300 hutI 3.5.2.7 - F ko:K01468 ko00340,ko01100,map00340,map01100 ko00000,ko00001,ko00002,ko01000 Imidazolone-5-propionate hydrolase
PAMMCEDC_00250 2.03e-218 ftcD 2.1.2.5, 4.3.1.4 - E ko:K00603,ko:K13990 ko00340,ko00670,ko01100,map00340,map00670,map01100 ko00000,ko00001,ko01000,ko03036,ko04147 Glutamate formiminotransferase
PAMMCEDC_00251 0.0 hutU 4.2.1.49 - H ko:K01712 ko00340,ko01100,map00340,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
PAMMCEDC_00252 6.8e-250 - - - K - - - WYL domain
PAMMCEDC_00253 0.0 - 3.1.21.3 - L ko:K01153 - ko00000,ko01000,ko02048 Type I restriction enzyme R protein N terminus (HSDR_N)
PAMMCEDC_00254 8.21e-269 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00255 0.0 - 3.1.21.3 - V ko:K01154 - ko00000,ko01000,ko02048 Type I restriction modification DNA specificity domain
PAMMCEDC_00256 0.0 - 2.1.1.72 - V ko:K03427 - ko00000,ko01000,ko02048 HsdM N-terminal domain
PAMMCEDC_00257 1.1e-300 queA 2.4.99.17 - H ko:K07568 - ko00000,ko01000,ko03016 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PAMMCEDC_00258 2.29e-253 - - - L - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00259 3.88e-92 paaI - - Q ko:K02614 ko00360,map00360 ko00000,ko00001,ko01000 phenylacetic acid degradation protein
PAMMCEDC_00260 5.98e-144 - 4.1.1.22 - E ko:K01590 ko00340,ko01100,ko01110,map00340,map01100,map01110 ko00000,ko00001,ko01000 Histidine carboxylase PI chain
PAMMCEDC_00261 0.0 acd - - C - - - Acyl-CoA dehydrogenase, C-terminal domain
PAMMCEDC_00262 7.59e-245 etfA - - C ko:K03522 - ko00000,ko04147 Psort location Cytoplasmic, score 8.96
PAMMCEDC_00263 5.53e-210 etfB - - C ko:K03521 - ko00000 COG2086 Electron transfer flavoprotein beta subunit
PAMMCEDC_00264 3.32e-56 - - - S - - - NVEALA protein
PAMMCEDC_00265 5.11e-47 - - - S - - - TolB-like 6-blade propeller-like
PAMMCEDC_00266 1.68e-121 - - - - - - - -
PAMMCEDC_00267 0.0 - - - M - - - Efflux transporter, outer membrane factor lipoprotein, NodT family
PAMMCEDC_00268 6.21e-265 - - - M - - - Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMMCEDC_00269 0.0 bpeF - - V ko:K03296 - ko00000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMMCEDC_00270 3.09e-287 ybdG_2 - - M ko:K16053 - ko00000,ko02000 Psort location CytoplasmicMembrane, score
PAMMCEDC_00271 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_00272 0.0 - - - P - - - Outer membrane protein beta-barrel family
PAMMCEDC_00273 1.27e-78 - - - S - - - Protein of unknown function (DUF1232)
PAMMCEDC_00274 0.0 - - - D - - - nuclear chromosome segregation
PAMMCEDC_00275 0.0 - - - DN - - - COG NOG14601 non supervised orthologous group
PAMMCEDC_00277 5.32e-102 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PAMMCEDC_00278 7.29e-06 - - - K - - - Helix-turn-helix domain
PAMMCEDC_00279 2.93e-107 - - - C - - - aldo keto reductase
PAMMCEDC_00281 1.81e-59 - - - S - - - aldo-keto reductase (NADP) activity
PAMMCEDC_00282 1.03e-22 - - - S - - - Aldo/keto reductase family
PAMMCEDC_00283 5.25e-11 - - - S - - - aldo keto reductase family
PAMMCEDC_00285 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PAMMCEDC_00286 8.57e-138 - - - L - - - SMART ATPase, AAA type, core
PAMMCEDC_00287 1.99e-36 - - - L - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00288 3.53e-185 - - - L - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00289 1.91e-68 - - - IQ - - - Short chain dehydrogenase
PAMMCEDC_00290 7.94e-172 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 COG COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
PAMMCEDC_00291 2.86e-316 - - - S ko:K06921 - ko00000 ATPase (AAA superfamily)
PAMMCEDC_00293 0.0 - - - S - - - Domain of unknonw function from B. Theta Gene description (DUF3874)
PAMMCEDC_00294 8.04e-313 - - - - - - - -
PAMMCEDC_00295 7.13e-230 - - - S - - - Fimbrillin-like
PAMMCEDC_00296 0.0 - - - S - - - PD-(D/E)XK nuclease superfamily
PAMMCEDC_00297 9.09e-50 - - - - - - - -
PAMMCEDC_00298 4.02e-116 rplJ - - J ko:K02864 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L10
PAMMCEDC_00299 1.68e-158 rplA - - J ko:K02863 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PAMMCEDC_00300 7.31e-100 rplK - - J ko:K02867 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PAMMCEDC_00301 1.44e-122 nusG - - K ko:K02601 - ko00000,ko03009,ko03021 Participates in transcription elongation, termination and antitermination
PAMMCEDC_00302 1.4e-36 secE - - U ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PAMMCEDC_00306 1.32e-238 - - - F ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_00307 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_00308 2.41e-264 - - - P ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_00309 0.0 - - - H - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_00310 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_00311 0.0 - - - J ko:K21572 - ko00000,ko02000 Pfam:SusD
PAMMCEDC_00312 9.84e-170 yjjG - - S ko:K07025 - ko00000 HAD hydrolase, TIGR02254 family
PAMMCEDC_00313 2.14e-121 - - - S - - - Transposase
PAMMCEDC_00314 5.41e-172 rsmI 2.1.1.198 - H ko:K07056 - ko00000,ko01000,ko03009 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PAMMCEDC_00315 1.27e-149 tdk 2.7.1.21 - F ko:K00857 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 thymidine kinase
PAMMCEDC_00316 8.31e-255 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_00318 8.87e-287 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_00319 7.31e-65 - - - S - - - MerR HTH family regulatory protein
PAMMCEDC_00320 9.27e-59 - - - S - - - Domain of unknown function, B. Theta Gene description (DUF3876)
PAMMCEDC_00321 3.98e-74 - - - K - - - Helix-turn-helix domain
PAMMCEDC_00322 5.03e-44 - - - K - - - Bacterial regulatory proteins, tetR family
PAMMCEDC_00323 6.24e-123 - - - V ko:K16907 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC-type multidrug transport system ATPase component
PAMMCEDC_00324 1.44e-41 - - - CP ko:K16906 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 transmembrane transport
PAMMCEDC_00325 1.54e-41 - - - - ko:K16905 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 -
PAMMCEDC_00326 5.08e-33 - - - - - - - -
PAMMCEDC_00327 5.59e-78 - - - - - - - -
PAMMCEDC_00328 2.21e-63 - - - S - - - Helix-turn-helix domain
PAMMCEDC_00329 6.17e-124 - - - - - - - -
PAMMCEDC_00330 2.09e-151 - - - - - - - -
PAMMCEDC_00331 1.89e-113 - - - S - - - ATPase family associated with various cellular activities (AAA)
PAMMCEDC_00332 4.24e-55 - - - - - - - -
PAMMCEDC_00333 4.76e-54 - - - - - - - -
PAMMCEDC_00334 0.0 cls - - M ko:K06131 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the phospholipase D family. Cardiolipin synthase subfamily
PAMMCEDC_00335 5.26e-234 metF 1.5.1.20 - C ko:K00297 ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PAMMCEDC_00336 1.18e-277 holB 2.7.7.7 - L ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 COG2812 DNA polymerase III gamma tau subunits
PAMMCEDC_00337 3.64e-285 yaaT - - S - - - PSP1 C-terminal domain protein
PAMMCEDC_00338 1.54e-121 gldH - - S - - - Gliding motility-associated lipoprotein GldH
PAMMCEDC_00339 0.0 rodA - - D ko:K05837 - ko00000,ko03036 Belongs to the SEDS family
PAMMCEDC_00340 0.0 mrdA 3.4.16.4 - M ko:K05515 ko00550,ko01501,map00550,map01501 ko00000,ko00001,ko01000,ko01011 penicillin-binding protein 2
PAMMCEDC_00341 9.58e-112 mreD - - S - - - rod shape-determining protein MreD
PAMMCEDC_00342 1.01e-193 mreC - - M ko:K03570 - ko00000,ko03036 Involved in formation and maintenance of cell shape
PAMMCEDC_00343 2.16e-240 mreB - - D ko:K03569 - ko00000,ko02048,ko03036,ko04812 Rod shape-determining protein MreB
PAMMCEDC_00344 0.0 purH 2.1.2.3, 3.5.4.10 - F ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 ko00000,ko00001,ko00002,ko01000,ko04147 bifunctional purine biosynthesis protein PurH
PAMMCEDC_00345 0.0 - - - U - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_00346 4.69e-261 mdsC - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00347 0.0 - - - E - - - Peptidase, S9A B C family, catalytic domain protein
PAMMCEDC_00348 2.6e-177 - - - S - - - Outer membrane protein beta-barrel domain
PAMMCEDC_00349 0.0 - - - T - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_00350 0.0 rhgT_2 3.1.1.11 - EG ko:K01051 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 Psort location Extracellular, score
PAMMCEDC_00351 4.55e-288 - - - Q - - - COG COG1073 Hydrolases of the alpha beta superfamily
PAMMCEDC_00352 0.0 - - - O - - - Pectic acid lyase
PAMMCEDC_00353 2.37e-115 - - - S - - - Cupin domain protein
PAMMCEDC_00354 0.0 - - - E - - - Abhydrolase family
PAMMCEDC_00355 0.0 - 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 31 family
PAMMCEDC_00356 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PAMMCEDC_00357 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PAMMCEDC_00358 0.0 - - - E ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_00359 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_00360 2.04e-223 - - - PT - - - Domain of unknown function (DUF4974)
PAMMCEDC_00361 3e-132 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PAMMCEDC_00362 0.0 - - - G - - - Pectinesterase
PAMMCEDC_00363 0.0 - - - G - - - pectinesterase activity
PAMMCEDC_00364 0.0 - - - S - - - Domain of unknown function (DUF5060)
PAMMCEDC_00365 0.0 - - - G - - - Belongs to the glycosyl hydrolase 43 family
PAMMCEDC_00366 0.0 - - - M ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_00367 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_00368 0.0 - - - G - - - Sulfatase-modifying factor enzyme 1
PAMMCEDC_00370 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_00371 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_00372 1.98e-233 - 3.1.1.11 - M ko:K01051 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 Pectinesterase
PAMMCEDC_00373 5.8e-314 - 3.2.1.172 GH105 G ko:K15532 - ko00000,ko01000 unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
PAMMCEDC_00374 0.0 - - - G ko:K02775 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_00375 5.93e-236 kduI 5.3.1.17 - G ko:K01815 ko00040,map00040 ko00000,ko00001,ko01000 Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
PAMMCEDC_00376 0.0 - - - P ko:K08191 - ko00000,ko02000 Major Facilitator Superfamily
PAMMCEDC_00377 0.0 - 3.6.4.12 - L ko:K10742 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 COG COG1112 Superfamily I DNA and RNA helicases and helicase subunits
PAMMCEDC_00378 9.07e-179 - - - - - - - -
PAMMCEDC_00379 0.0 - - - G - - - Putative collagen-binding domain of a collagenase
PAMMCEDC_00380 1.33e-256 - - - G - - - Belongs to the glycosyl hydrolase 43 family
PAMMCEDC_00381 0.0 - 1.2.1.21, 1.2.1.22 - C ko:K07248 ko00620,ko00630,ko01120,map00620,map00630,map01120 ko00000,ko00001,ko01000 Aldehyde dehydrogenase family
PAMMCEDC_00382 0.0 - - - T - - - Y_Y_Y domain
PAMMCEDC_00383 0.0 - - - G - - - Glycosyl hydrolases family 28
PAMMCEDC_00384 0.0 - - - G - - - Glycosyl hydrolase family 2, sugar binding domain protein
PAMMCEDC_00385 0.0 - - - GM ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_00386 0.0 - - - P - - - TonB dependent receptor
PAMMCEDC_00387 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Beta galactosidase small chain
PAMMCEDC_00389 8.49e-307 - - - O - - - protein conserved in bacteria
PAMMCEDC_00390 1.61e-293 - - - G - - - Glycosyl Hydrolase Family 88
PAMMCEDC_00391 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PAMMCEDC_00392 1.04e-248 xynBA - - G - - - Belongs to the glycosyl hydrolase 43 family
PAMMCEDC_00393 0.0 - - - KT - - - helix_turn_helix, arabinose operon control protein
PAMMCEDC_00394 2.41e-157 - - - L - - - VirE N-terminal domain protein
PAMMCEDC_00395 0.0 - - - L - - - COG NOG25561 non supervised orthologous group
PAMMCEDC_00396 3.31e-35 - - - S - - - Domain of unknown function (DUF4248)
PAMMCEDC_00397 1.42e-112 - - - L - - - regulation of translation
PAMMCEDC_00399 1.38e-121 - - - V - - - Ami_2
PAMMCEDC_00400 2.03e-18 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00401 1.77e-108 - - - C ko:K02121 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002 Produces ATP from ADP in the presence of a proton gradient across the membrane
PAMMCEDC_00402 1.15e-197 - - - C - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00403 0.0 atpA 3.6.3.14, 3.6.3.15 - C ko:K02117 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit
PAMMCEDC_00404 3.78e-316 ntpB - - C ko:K02118 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002 the B subunit is part of the catalytic core of the ATP synthase complex
PAMMCEDC_00405 2.92e-130 - - - C ko:K02120 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002 Psort location Cytoplasmic, score 8.96
PAMMCEDC_00406 0.0 - - - C ko:K02123 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002 Belongs to the V-ATPase 116 kDa subunit family
PAMMCEDC_00407 1.62e-95 ntpK - - C ko:K02124 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002 COG COG0636 F0F1-type ATP synthase, subunit c Archaeal vacuolar-type H -ATPase, subunit K
PAMMCEDC_00408 0.0 - 2.4.1.11 GT3 G ko:K00693 ko00500,ko01100,ko04151,ko04152,ko04910,ko04922,ko04931,map00500,map01100,map04151,map04152,map04910,map04922,map04931 ko00000,ko00001,ko01000,ko01003 Starch synthase
PAMMCEDC_00409 0.0 glgP 2.4.1.1, 2.4.1.11, 2.4.1.8 GH65,GT3,GT35 G ko:K00688,ko:K00691,ko:K16153 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 ko00000,ko00001,ko01000,ko01003 COG0058 Glucan phosphorylase
PAMMCEDC_00410 5.78e-268 - - - O - - - Antioxidant, AhpC TSA family
PAMMCEDC_00412 3.59e-144 - - - T - - - PAS domain S-box protein
PAMMCEDC_00413 8.95e-61 - - - T - - - His Kinase A (phosphoacceptor) domain
PAMMCEDC_00414 0.0 potA 3.6.3.29, 3.6.3.30, 3.6.3.31 - P ko:K02010,ko:K02017,ko:K10112,ko:K11072 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PAMMCEDC_00415 1.23e-181 - - - P ko:K11071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_00416 5.98e-172 ydcV - - P ko:K11070 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, permease protein
PAMMCEDC_00417 0.0 potD - - P ko:K11069 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Psort location Periplasmic, score 9.44
PAMMCEDC_00418 8.75e-215 prs 2.7.6.1 - EF ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 COG0462 Phosphoribosylpyrophosphate synthetase
PAMMCEDC_00419 5.55e-149 thiE 2.5.1.3 - H ko:K00788 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Thiamine monophosphate synthase TENI
PAMMCEDC_00421 2.5e-79 - - - - - - - -
PAMMCEDC_00422 3.58e-288 - - - E - - - Glutathionylspermidine synthase preATP-grasp
PAMMCEDC_00423 3.22e-163 moeZ 2.7.7.80, 2.8.1.11 - H ko:K21029,ko:K21147 ko04122,map04122 ko00000,ko00001,ko01000 involved in molybdopterin and thiamine biosynthesis family 2
PAMMCEDC_00424 1.83e-282 thiH 4.1.99.19 - C ko:K03150 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 Thiazole biosynthesis protein ThiH
PAMMCEDC_00425 6.3e-140 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00426 9.52e-124 - - - S - - - COG NOG35345 non supervised orthologous group
PAMMCEDC_00427 0.0 thiC 4.1.99.17 - H ko:K03147 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PAMMCEDC_00428 1.23e-177 thiG 2.8.1.10 - H ko:K03149 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
PAMMCEDC_00429 3.07e-149 thiE 2.5.1.3 - H ko:K00788 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PAMMCEDC_00430 1.04e-41 thiS - - H ko:K03154 ko04122,map04122 ko00000,ko00001 thiamine biosynthesis protein ThiS
PAMMCEDC_00431 1.31e-153 sodB 1.15.1.1 - C ko:K04564 ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016 ko00000,ko00001,ko01000 Destroys radicals which are normally produced within the cells and which are toxic to biological systems
PAMMCEDC_00432 0.0 pcrA 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
PAMMCEDC_00433 1.04e-289 nspC 4.1.1.96 - E ko:K13747 ko00330,ko01100,map00330,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_00437 0.0 leuA 2.3.3.13 - E ko:K01649 ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PAMMCEDC_00438 0.0 leuC 4.2.1.33, 4.2.1.35 - H ko:K01703 ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PAMMCEDC_00439 1.26e-143 leuD 4.2.1.33, 4.2.1.35 - E ko:K01704 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PAMMCEDC_00440 0.0 leuA_1 2.3.1.182 - E ko:K09011 ko00290,ko00660,ko01100,ko01210,ko01230,map00290,map00660,map01100,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Belongs to the alpha-IPM synthase homocitrate synthase family
PAMMCEDC_00441 2.6e-259 leuB 1.1.1.85 - CE ko:K00052 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PAMMCEDC_00442 1.99e-284 resA - - O - - - Thioredoxin
PAMMCEDC_00443 3.13e-119 msrA 1.8.4.11, 1.8.4.12 - O ko:K07304,ko:K12267 - ko00000,ko01000 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PAMMCEDC_00444 1.14e-138 - - - S - - - COG COG0457 FOG TPR repeat
PAMMCEDC_00445 0.0 recQ3 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase
PAMMCEDC_00446 6.89e-102 - - - K - - - transcriptional regulator (AraC
PAMMCEDC_00447 0.0 - 3.4.14.4 - S ko:K01277 - ko00000,ko01000,ko01002 Peptidase family M49
PAMMCEDC_00448 2.14e-156 - - - L - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00449 5.82e-116 fur - - P ko:K03711 - ko00000,ko03000 Belongs to the Fur family
PAMMCEDC_00450 1.87e-315 purA 6.3.4.4 - F ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PAMMCEDC_00451 1.67e-180 - - - L - - - COG NOG19076 non supervised orthologous group
PAMMCEDC_00452 7.24e-287 epsN - - E - - - Belongs to the DegT DnrJ EryC1 family
PAMMCEDC_00453 1.46e-302 - - - M - - - COG2885 Outer membrane protein and related peptidoglycan-associated
PAMMCEDC_00454 1.44e-277 - - - M - - - chlorophyll binding
PAMMCEDC_00455 0.0 cap5D - - GM - - - Polysaccharide biosynthesis protein
PAMMCEDC_00456 1.5e-129 - - - K - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00457 1.77e-282 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_00458 1.62e-254 corA - - P ko:K03284 - ko00000,ko02000 Mediates influx of magnesium ions
PAMMCEDC_00459 1.78e-109 lrp - - K ko:K03719,ko:K05800 - ko00000,ko03000,ko03036 Transcriptional regulator, AsnC family
PAMMCEDC_00460 3.76e-23 - - - - - - - -
PAMMCEDC_00461 2.51e-151 - - - S ko:K03975 - ko00000 Psort location CytoplasmicMembrane, score
PAMMCEDC_00462 1.06e-148 - - - P ko:K07220 - ko00000 COG1392 Phosphate transport regulator (distant homolog of PhoU)
PAMMCEDC_00463 3.04e-235 pitA - - P ko:K03306 - ko00000 Phosphate transporter family
PAMMCEDC_00464 6.31e-79 - - - - - - - -
PAMMCEDC_00465 0.0 - - - P ko:K02014 - ko00000,ko02000 COG COG1629 Outer membrane receptor proteins, mostly Fe transport
PAMMCEDC_00466 3.93e-119 - - - S - - - Domain of unknown function (DUF4625)
PAMMCEDC_00467 1.37e-308 metY 2.5.1.49 - E ko:K01740 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PAMMCEDC_00468 0.0 lctP - - C ko:K03303 - ko00000,ko02000 L-lactate permease
PAMMCEDC_00469 5.26e-88 - - - S - - - Protein of unknown function (DUF3037)
PAMMCEDC_00470 6.64e-188 - - - DT - - - aminotransferase class I and II
PAMMCEDC_00471 3.07e-28 - - - S - - - COG NOG16623 non supervised orthologous group
PAMMCEDC_00472 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_00473 2.21e-168 - - - T - - - Response regulator receiver domain
PAMMCEDC_00474 4.49e-169 ydaH - - H ko:K12942 - ko00000 Psort location CytoplasmicMembrane, score
PAMMCEDC_00476 0.0 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PAMMCEDC_00477 0.0 ybdG_1 - - M ko:K16053 - ko00000,ko02000 Mechanosensitive ion channel
PAMMCEDC_00478 0.0 - - - IQ ko:K00666 - ko00000,ko01000,ko01004 Psort location Cytoplasmic, score 9.97
PAMMCEDC_00479 8.23e-132 - - - K - - - Psort location Cytoplasmic, score
PAMMCEDC_00480 4.22e-143 ribE 2.5.1.9 - H ko:K00793 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 riboflavin synthase subunit alpha
PAMMCEDC_00481 2.39e-310 yihY - - S ko:K07058 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_00482 5.01e-62 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00483 1.64e-199 dnaJ2 - - O ko:K03686,ko:K05516 - ko00000,ko03029,ko03036,ko03110 Psort location Cytoplasmic, score
PAMMCEDC_00484 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_00485 0.0 cpdB 3.1.3.6, 3.1.4.16 - F ko:K01119 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the 5'-nucleotidase family
PAMMCEDC_00486 2.01e-68 - - - - - - - -
PAMMCEDC_00487 0.0 - - - P ko:K16089 - ko00000,ko02000 COG4771 Outer membrane receptor for ferrienterochelin and colicins
PAMMCEDC_00488 0.0 eam 5.4.3.2 - E ko:K01843 ko00310,map00310 ko00000,ko00001,ko01000 KamA family
PAMMCEDC_00489 0.0 hypBA2 - - G - - - BNR repeat-like domain
PAMMCEDC_00490 0.0 - 3.2.1.40 - G ko:K05989 - ko00000,ko01000 Alpha-L-rhamnosidase N-terminal domain protein
PAMMCEDC_00491 0.0 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PAMMCEDC_00492 0.0 - - - Q - - - cephalosporin-C deacetylase activity
PAMMCEDC_00493 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_00494 8.44e-200 - - - K - - - COG COG2207 AraC-type DNA-binding domain-containing proteins
PAMMCEDC_00495 8.48e-134 ykgB - - S - - - Psort location CytoplasmicMembrane, score 9.46
PAMMCEDC_00496 0.0 htrA - - O - - - Psort location Periplasmic, score
PAMMCEDC_00497 1.8e-189 rpoD - - K ko:K03086 - ko00000,ko03021 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PAMMCEDC_00498 1.08e-83 - - - S - - - COG NOG31446 non supervised orthologous group
PAMMCEDC_00499 1.48e-315 - - - Q - - - Clostripain family
PAMMCEDC_00500 4.6e-89 - - - - - - - -
PAMMCEDC_00501 3.62e-287 mntH - - P ko:K03322 - ko00000,ko02000 Metal ion transporter, metal ion (Mn2 Fe2 ) transporter (Nramp) family
PAMMCEDC_00502 0.0 cvrA - - P ko:K11105 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_00503 9.24e-317 - - - V - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_00504 2.72e-156 pgmB - - S - - - HAD hydrolase, family IA, variant 3
PAMMCEDC_00505 5.43e-189 panB 2.1.2.11 - H ko:K00606 ko00770,ko01100,ko01110,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate
PAMMCEDC_00506 1.24e-277 - - - EGP - - - Transporter, major facilitator family protein
PAMMCEDC_00507 0.0 - - - S ko:K15738 - ko00000,ko02000 ATP-binding cassette protein, ChvD family
PAMMCEDC_00508 0.0 - - - P - - - Carboxypeptidase regulatory-like domain
PAMMCEDC_00509 0.0 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00510 1.6e-69 - - - - - - - -
PAMMCEDC_00512 3.86e-102 - 3.5.1.28 - V ko:K01447 - ko00000,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_00513 2.12e-10 - - - - - - - -
PAMMCEDC_00514 6.03e-109 - - - L - - - DNA-binding protein
PAMMCEDC_00515 2.92e-46 - - - S - - - Domain of unknown function (DUF4248)
PAMMCEDC_00516 0.0 - - - L - - - COG NOG25561 non supervised orthologous group
PAMMCEDC_00517 1.46e-154 - - - L - - - VirE N-terminal domain protein
PAMMCEDC_00520 0.0 - - - P - - - TonB-dependent receptor
PAMMCEDC_00521 0.0 - - - S - - - amine dehydrogenase activity
PAMMCEDC_00522 1.22e-195 - - - S - - - PD-(D/E)XK nuclease family transposase
PAMMCEDC_00523 2.11e-89 rpsP - - J ko:K02959 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bS16 family
PAMMCEDC_00525 8.64e-112 ftnA 1.16.3.2 - P ko:K02217 - ko00000,ko01000 Iron-storage protein
PAMMCEDC_00526 1.08e-208 - - - I - - - pectin acetylesterase
PAMMCEDC_00527 0.0 - - - S - - - oligopeptide transporter, OPT family
PAMMCEDC_00528 3.86e-188 - - - S - - - COG NOG27188 non supervised orthologous group
PAMMCEDC_00529 1.79e-205 - - - S - - - Ser Thr phosphatase family protein
PAMMCEDC_00530 1.58e-96 - - - S - - - Protein of unknown function (DUF1573)
PAMMCEDC_00531 1.15e-75 dgkA 2.7.1.107, 2.7.1.66 - M ko:K00887,ko:K00901 ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231 ko00000,ko00001,ko01000 Psort location CytoplasmicMembrane, score
PAMMCEDC_00532 0.0 relA 2.7.6.5, 3.1.7.2 - KT ko:K00951,ko:K01139 ko00230,map00230 ko00000,ko00001,ko01000,ko03009 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PAMMCEDC_00533 0.0 - - - H - - - COG NOG06391 non supervised orthologous group
PAMMCEDC_00534 3.51e-314 - - - S - - - Peptide-N-glycosidase F, N terminal
PAMMCEDC_00535 4.32e-173 - - - L - - - DNA alkylation repair enzyme
PAMMCEDC_00536 3.11e-121 paiA - - K - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00537 2.81e-74 - - - K ko:K10947 - ko00000,ko03000 transcriptional regulator PadR family
PAMMCEDC_00538 5.25e-236 - - - KT ko:K03973 - ko00000,ko02048,ko03000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_00539 3.06e-283 purT 2.1.2.2 - F ko:K08289 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PAMMCEDC_00540 0.0 ccmC - - O - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_00541 0.0 - - - C - - - Di-haem oxidoreductase, putative peroxidase
PAMMCEDC_00543 1.46e-283 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_00544 0.0 - - - O - - - unfolded protein binding
PAMMCEDC_00545 5.04e-155 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_00546 0.0 - - - G - - - glycogen debranching enzyme, archaeal type
PAMMCEDC_00547 0.0 gmhA 2.4.1.346 GT4 M ko:K13668 - ko00000,ko01000,ko01003 Glycosyltransferase, group 1 family protein
PAMMCEDC_00548 0.0 amyA 3.2.1.1 GH57 G ko:K07405 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 57 family
PAMMCEDC_00550 5.05e-233 bioB 2.8.1.6 - H ko:K01012 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
PAMMCEDC_00551 0.0 bioA 2.6.1.62 - H ko:K00833 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko00002,ko01000,ko01007 the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a
PAMMCEDC_00552 1.62e-275 bioF 2.3.1.29, 2.3.1.47 - H ko:K00639,ko:K00652 ko00260,ko00780,ko01100,map00260,map00780,map01100 ko00000,ko00001,ko00002,ko01000,ko01007 COG COG0156 7-keto-8-aminopelargonate synthetase and related enzymes
PAMMCEDC_00553 1.77e-157 bioC 2.1.1.197, 3.1.1.85 - S ko:K02169,ko:K09789 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko00002,ko01000 Protein of unknown function (DUF452)
PAMMCEDC_00554 1.02e-182 bioC 2.1.1.197, 3.1.1.85 - H ko:K02169,ko:K09789 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko00002,ko01000 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway
PAMMCEDC_00555 6.68e-156 bioD 6.3.3.3 - H ko:K01935 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
PAMMCEDC_00556 0.0 glnA 6.3.1.2 - S ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 Glutamate--ammonia ligase, catalytic domain protein
PAMMCEDC_00557 0.0 amt - - P ko:K03320 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_00558 2.13e-76 glnB - - K ko:K04751 ko02020,map02020 ko00000,ko00001 Nitrogen regulatory protein P-II
PAMMCEDC_00559 8.4e-177 - - - S - - - Psort location OuterMembrane, score
PAMMCEDC_00560 2.54e-308 dapL 2.6.1.83 - H ko:K10206 ko00300,ko01100,ko01110,ko01130,ko01230,map00300,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate
PAMMCEDC_00561 1.18e-200 dapF 5.1.1.7 - E ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PAMMCEDC_00562 0.0 modF - - P ko:K05776 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC molybdenum transporter, ATP-binding subunit modF
PAMMCEDC_00563 4.28e-225 - 4.3.3.7 - H ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
PAMMCEDC_00564 0.0 - - - E ko:K03307 - ko00000 alkaline phosphatase synthesis sensor protein phoR K07636
PAMMCEDC_00565 6.1e-228 fabK 1.3.1.9 - C ko:K02371 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 related to 2-nitropropane dioxygenase
PAMMCEDC_00566 9.98e-288 dcuB - - S ko:K07791,ko:K07792 ko02020,map02020 ko00000,ko00001,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_00567 4.4e-246 ansB 3.5.1.1 - EJ ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the asparaginase 1 family
PAMMCEDC_00568 1.05e-299 - - - M - - - Phosphate-selective porin O and P
PAMMCEDC_00569 9.59e-92 - - - S - - - HEPN domain
PAMMCEDC_00570 1.54e-67 - - - L - - - Nucleotidyltransferase domain
PAMMCEDC_00571 9.8e-261 sstT - - U - - - Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PAMMCEDC_00572 0.0 gnd 1.1.1.343, 1.1.1.44 - H ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PAMMCEDC_00573 0.0 zwf 1.1.1.363, 1.1.1.49 - G ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PAMMCEDC_00574 1.57e-173 pgl 3.1.1.31 - G ko:K01057 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 COG0363 6-phosphogluconolactonase Glucosamine-6-phosphate isomerase deaminase
PAMMCEDC_00575 6.57e-274 cydB 1.10.3.14 - C ko:K00426 ko00190,ko01100,ko02020,map00190,map01100,map02020 ko00000,ko00001,ko00002,ko01000 COG1294 Cytochrome bd-type quinol oxidase subunit 2
PAMMCEDC_00576 0.0 cydA 1.10.3.14 - C ko:K00425 ko00190,ko01100,ko02020,map00190,map01100,map02020 ko00000,ko00001,ko00002,ko01000 COG1271 Cytochrome bd-type quinol oxidase, subunit 1
PAMMCEDC_00577 9.82e-45 - - - S - - - COG NOG17489 non supervised orthologous group
PAMMCEDC_00578 5.09e-300 - - - MU ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 type I secretion outer membrane protein, TolC family
PAMMCEDC_00579 7.95e-247 - - - M ko:K02005 - ko00000 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMMCEDC_00580 2.9e-171 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PAMMCEDC_00581 3.7e-279 - - - V ko:K02004 - ko00000,ko00002,ko02000 Efflux ABC transporter, permease protein
PAMMCEDC_00582 1.8e-249 cheA - - T - - - two-component sensor histidine kinase
PAMMCEDC_00583 3.39e-167 yehT_1 - - K - - - COG3279 Response regulator of the LytR AlgR family
PAMMCEDC_00584 2.06e-107 - - - T ko:K05770 ko04080,ko04214,ko04979,ko05166,map04080,map04214,map04979,map05166 ko00000,ko00001,ko02000 TspO/MBR family
PAMMCEDC_00585 1.15e-169 - - - D ko:K07322 - ko00000 Hemerythrin HHE cation binding domain protein
PAMMCEDC_00586 1.03e-140 - - - K - - - COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PAMMCEDC_00587 1.15e-181 - - - C ko:K18928 - ko00000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_00588 0.0 - - - C ko:K18929 - ko00000 electron transport protein YkgF
PAMMCEDC_00589 2.44e-135 lutC - - S ko:K00782 - ko00000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_00590 3.83e-177 - - - - - - - -
PAMMCEDC_00591 2.82e-180 pflA 1.97.1.4 - C ko:K04069 - ko00000,ko01000 Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PAMMCEDC_00592 0.0 pflB 2.3.1.54 - C ko:K00656 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 9.97
PAMMCEDC_00595 3.13e-277 wbsE - - M - - - Psort location Cytoplasmic, score
PAMMCEDC_00596 1.67e-157 pdxH 1.4.3.5 - H ko:K00275 ko00750,ko01100,ko01120,map00750,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP)
PAMMCEDC_00598 3.27e-251 - - - L - - - Phage integrase SAM-like domain
PAMMCEDC_00603 4.89e-35 - - - L - - - COG NOG08810 non supervised orthologous group
PAMMCEDC_00604 2e-55 - - - L - - - Endodeoxyribonuclease RusA
PAMMCEDC_00605 1.07e-33 - - - - - - - -
PAMMCEDC_00609 1.36e-49 - - - S - - - Protein of unknown function (DUF2442)
PAMMCEDC_00610 1.28e-54 - - - S - - - Domain of unknown function (DUF4160)
PAMMCEDC_00611 6.99e-27 - - - K - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00612 5.73e-25 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00614 5.86e-68 - - - S - - - WYL_2, Sm-like SH3 beta-barrel fold
PAMMCEDC_00619 0.0 feoB - - P ko:K04759 - ko00000,ko02000 transporter of a GTP-driven Fe(2 ) uptake system
PAMMCEDC_00620 9.58e-317 tilS 6.3.4.19 - D ko:K04075 - ko00000,ko01000,ko03016 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PAMMCEDC_00621 0.0 - - - O - - - COG COG0457 FOG TPR repeat
PAMMCEDC_00622 6.61e-181 trmH 2.1.1.185 - J ko:K03218,ko:K03437 - ko00000,ko01000,ko03009,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PAMMCEDC_00623 0.0 recN - - L ko:K03631 - ko00000,ko03400 May be involved in recombinational repair of damaged DNA
PAMMCEDC_00624 8.79e-283 coaBC 4.1.1.36, 6.3.2.5 - H ko:K13038 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PAMMCEDC_00625 1.15e-187 dnaQ 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 COG0847 DNA polymerase III epsilon subunit and related 3'-5'
PAMMCEDC_00626 1.99e-260 dnaN 2.7.7.7 - L ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PAMMCEDC_00627 6.68e-90 - - - L - - - COG NOG19098 non supervised orthologous group
PAMMCEDC_00628 0.0 - - - S - - - Domain of unknown function (DUF4270)
PAMMCEDC_00629 2.63e-201 glgA 2.4.1.21 GT5 G ko:K00703 ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026 ko00000,ko00001,ko00002,ko01000,ko01003 Starch synthase, catalytic domain
PAMMCEDC_00630 3.59e-203 panC 6.3.2.1 - H ko:K01918 ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
PAMMCEDC_00631 1.57e-77 panD 4.1.1.11 - H ko:K01579 ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
PAMMCEDC_00632 0.0 fbp 3.1.3.11 - G ko:K04041 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3
PAMMCEDC_00633 0.0 - - - P ko:K07085 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_00634 1.93e-203 nudC 3.6.1.22 - L ko:K03426 ko00760,ko01100,ko04146,map00760,map01100,map04146 ko00000,ko00001,ko01000 COG COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding
PAMMCEDC_00635 0.0 yhgF - - K ko:K06959 - ko00000 Tex-like protein N-terminal domain
PAMMCEDC_00637 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PAMMCEDC_00638 0.0 - - - T - - - cheY-homologous receiver domain
PAMMCEDC_00639 6.52e-217 - - - G - - - Xylose isomerase-like TIM barrel
PAMMCEDC_00640 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_00641 0.0 - - - F ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_00642 0.0 - - - O - - - Subtilase family
PAMMCEDC_00643 0.0 - - - G - - - pectate lyase K01728
PAMMCEDC_00644 2.23e-141 - - - G - - - Protein of unknown function (DUF3826)
PAMMCEDC_00645 0.0 - - - G - - - pectate lyase K01728
PAMMCEDC_00646 0.0 - - - M - - - Belongs to the glycosyl hydrolase 28 family
PAMMCEDC_00647 9.34e-130 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PAMMCEDC_00648 1.31e-42 - - - - - - - -
PAMMCEDC_00649 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_00650 0.0 - - - E ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_00651 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_00652 0.0 - - - E ko:K21572 - ko00000,ko02000 Pfam:SusD
PAMMCEDC_00653 0.0 - - - G - - - Histidine acid phosphatase
PAMMCEDC_00654 3.33e-242 - 4.1.1.37 - H ko:K01599 ko00860,ko01100,ko01110,map00860,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Uroporphyrinogen decarboxylase (URO-D)
PAMMCEDC_00655 8.4e-166 - - - E - - - Vitamin B12 dependent methionine synthase, activation domain protein
PAMMCEDC_00656 0.0 - - - S ko:K03307 - ko00000 Sodium:solute symporter family
PAMMCEDC_00657 0.0 - - - E - - - B12 binding domain
PAMMCEDC_00658 0.0 - 3.2.1.177 GH31 G ko:K01811 - ko00000,ko01000 Belongs to the glycosyl hydrolase 31 family
PAMMCEDC_00659 3.94e-238 - - - P - - - Right handed beta helix region
PAMMCEDC_00660 3.52e-96 - - - - - - - -
PAMMCEDC_00662 3.12e-274 - - - C ko:K22227 - ko00000 4Fe-4S single cluster domain
PAMMCEDC_00663 1.82e-278 - - - S ko:K22227 - ko00000 4Fe-4S single cluster domain
PAMMCEDC_00664 1.81e-221 - - - - - - - -
PAMMCEDC_00665 2.46e-102 - - - U - - - peptidase
PAMMCEDC_00666 1.45e-60 - - - S - - - Coenzyme PQQ synthesis protein D (PqqD)
PAMMCEDC_00667 4.43e-60 - - - S - - - Coenzyme PQQ synthesis protein D (PqqD)
PAMMCEDC_00668 4.42e-275 - - - S - - - Uncharacterised nucleotidyltransferase
PAMMCEDC_00669 0.0 - - - V - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_00670 6.33e-186 - - - M ko:K01991 ko02026,map02026 ko00000,ko00001,ko02000 COG1596 Periplasmic protein involved in polysaccharide export
PAMMCEDC_00671 0.0 - - - DM - - - Chain length determinant protein
PAMMCEDC_00672 9.42e-173 - - - GM - - - COG4464 Capsular polysaccharide biosynthesis protein
PAMMCEDC_00673 1.55e-255 - - - S - - - Endonuclease Exonuclease phosphatase family protein
PAMMCEDC_00674 2.34e-203 - - - GM ko:K09690 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC-2 type transporter
PAMMCEDC_00675 1.55e-312 rfbB - - GM ko:K09691 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ATPases associated with a variety of cellular activities
PAMMCEDC_00676 2.39e-225 - - - M - - - Glycosyl transferase family 2
PAMMCEDC_00677 5.68e-280 - - - M - - - Glycosyl transferases group 1
PAMMCEDC_00678 1.91e-282 - - - M - - - Glycosyl transferases group 1
PAMMCEDC_00679 3.21e-244 - - - M - - - Glycosyltransferase like family 2
PAMMCEDC_00680 4.69e-283 - - - S - - - Polysaccharide pyruvyl transferase
PAMMCEDC_00681 1.59e-269 - - - S - - - Glycosyl Hydrolase Family 88
PAMMCEDC_00682 4.12e-224 - - - H - - - Pfam:DUF1792
PAMMCEDC_00683 2.12e-252 - - - V - - - Glycosyl transferase, family 2
PAMMCEDC_00684 0.0 - - - - - - - -
PAMMCEDC_00685 1.96e-316 - - - M - - - Glycosyl transferases group 1
PAMMCEDC_00686 1.64e-182 - 2.7.8.12 - M ko:K09809 - ko00000,ko01000 Glycosyltransferase sugar-binding region containing DXD motif
PAMMCEDC_00687 8.59e-295 - - - M - - - Glycosyl transferases group 1
PAMMCEDC_00688 3.19e-228 - - - M - - - Glycosyl transferase family 2
PAMMCEDC_00689 1.44e-256 - - - M - - - Glycosyltransferase, group 2 family protein
PAMMCEDC_00690 7.79e-283 - - - M - - - Glycosyltransferase, group 1 family protein
PAMMCEDC_00691 7.04e-249 - - - S - - - Glycosyltransferase, group 2 family protein
PAMMCEDC_00692 3.65e-274 - - - S - - - EpsG family
PAMMCEDC_00694 6.64e-184 - - - S - - - DUF218 domain
PAMMCEDC_00695 3.69e-280 - - - M - - - Glycosyltransferase, group 1 family protein
PAMMCEDC_00696 9.49e-136 neuD - - S ko:K19429 - ko00000,ko01000 sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family
PAMMCEDC_00697 5.31e-149 pglC - - M - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_00699 1.37e-129 - 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PAMMCEDC_00700 1.69e-119 - 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PAMMCEDC_00701 0.0 - - - G - - - hydrolase, family 65, central catalytic
PAMMCEDC_00702 0.0 - 3.1.1.53 - G ko:K05970 - ko00000,ko01000 COG NOG04984 non supervised orthologous group
PAMMCEDC_00703 0.0 - - - G - - - Glycosyl hydrolase family 2, sugar binding domain protein
PAMMCEDC_00704 0.0 - - - G - - - beta-galactosidase
PAMMCEDC_00705 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 beta-galactosidase
PAMMCEDC_00706 0.0 - - - E ko:K21572 - ko00000,ko02000 Pfam:SusD
PAMMCEDC_00707 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_00709 0.0 - - - M ko:K21572 - ko00000,ko02000 Pfam:SusD
PAMMCEDC_00710 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_00711 0.0 - - - P ko:K07085 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_00712 2.05e-108 - - - - - - - -
PAMMCEDC_00713 0.0 - - - S - - - AAA domain, putative AbiEii toxin, Type IV TA system
PAMMCEDC_00714 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PAMMCEDC_00715 2.06e-46 - - - K - - - Helix-turn-helix domain
PAMMCEDC_00716 0.0 - - - G - - - Glycosyl hydrolase, family 20, catalytic domain
PAMMCEDC_00717 2.67e-223 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_00718 1.74e-136 - - - M - - - Protein of unknown function (DUF3575)
PAMMCEDC_00719 7.68e-253 - - - U - - - Domain of unknown function, B. Theta Gene description (DUF3868)
PAMMCEDC_00720 1.55e-140 - - - M - - - Protein of unknown function (DUF3575)
PAMMCEDC_00721 0.0 - - - M - - - COG NOG23378 non supervised orthologous group
PAMMCEDC_00722 0.0 - - - S - - - Major fimbrial subunit protein type IV, Fimbrillin, C-terminal
PAMMCEDC_00723 4.02e-237 - - - S - - - Fimbrillin-A associated anchor proteins Mfa1 and Mfa2
PAMMCEDC_00724 2.05e-229 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_00725 0.0 wcaJ_2 2.7.8.6 - M ko:K00996,ko:K03606 ko05111,map05111 ko00000,ko00001,ko01000,ko01005 Psort location CytoplasmicMembrane, score
PAMMCEDC_00726 4.99e-180 - - - M ko:K01991 ko02026,map02026 ko00000,ko00001,ko02000 COG1596 Periplasmic protein involved in polysaccharide export
PAMMCEDC_00727 0.0 - - - DM - - - Chain length determinant protein
PAMMCEDC_00728 4.76e-52 - 3.5.1.28 - V ko:K01447 - ko00000,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_00729 0.000518 - - - - - - - -
PAMMCEDC_00730 7.4e-93 - - - L - - - Bacterial DNA-binding protein
PAMMCEDC_00731 5.71e-48 - - - S - - - Domain of unknown function (DUF4248)
PAMMCEDC_00732 0.0 - - - L - - - Protein of unknown function (DUF3987)
PAMMCEDC_00733 3.13e-114 - - - K - - - Transcription termination antitermination factor NusG
PAMMCEDC_00734 2.82e-61 - - - M - - - Polysaccharide pyruvyl transferase
PAMMCEDC_00735 4.4e-97 - - - C - - - PFAM Coenzyme F420 hydrogenase dehydrogenase, beta subunit
PAMMCEDC_00736 8.77e-77 - - - V - - - Glycosyl transferase, family 2
PAMMCEDC_00737 8.73e-82 - - - - - - - -
PAMMCEDC_00738 6.18e-40 - - - H - - - Glycosyl transferase family 11
PAMMCEDC_00739 1.77e-134 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_00741 6.8e-97 epsF - GT4 M ko:K19424 - ko00000,ko01000,ko01003 Glycosyl transferases group 1
PAMMCEDC_00742 8.39e-118 - - - M - - - Glycosyltransferase, group 1 family protein
PAMMCEDC_00743 2.1e-45 - - - S - - - Polysaccharide pyruvyl transferase
PAMMCEDC_00744 6.79e-74 - - - C - - - PFAM Coenzyme F420 hydrogenase dehydrogenase, beta subunit
PAMMCEDC_00745 1.2e-126 - - - M - - - Glycosyl transferases group 1
PAMMCEDC_00746 3.96e-131 - - - S ko:K03818 - ko00000,ko01000 Bacterial transferase hexapeptide (six repeats)
PAMMCEDC_00747 1.7e-196 - - GT2 S ko:K13002 - ko00000,ko01000,ko01003,ko01005 Glycosyl transferase family 2
PAMMCEDC_00748 2.82e-180 - - - S - - - Exopolysaccharide biosynthesis protein YbjH
PAMMCEDC_00749 7.99e-294 - - - - - - - -
PAMMCEDC_00750 3.25e-274 - - - S - - - COG NOG33609 non supervised orthologous group
PAMMCEDC_00751 4.04e-266 gmd 4.2.1.47 - M ko:K01711 ko00051,ko00520,ko01100,map00051,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
PAMMCEDC_00752 2.02e-271 fcl 1.1.1.271 - GM ko:K02377 ko00051,ko00520,ko01100,map00051,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction
PAMMCEDC_00753 1.9e-258 manC 2.7.7.13 - M ko:K00971 ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110 ko00000,ko00001,ko00002,ko01000 mannose-1-phosphate guanylyltransferase
PAMMCEDC_00754 2.58e-102 - - - E - - - D,D-heptose 1,7-bisphosphate phosphatase
PAMMCEDC_00755 0.0 - - - G - - - Alpha-L-rhamnosidase
PAMMCEDC_00756 0.0 - - - S - - - Parallel beta-helix repeats
PAMMCEDC_00757 0.0 - - - S ko:K09955 - ko00000 protein conserved in bacteria
PAMMCEDC_00758 0.0 - 3.2.1.40 - G ko:K05989 - ko00000,ko01000 Alpha-L-rhamnosidase N-terminal domain protein
PAMMCEDC_00759 0.0 - - - G - - - Putative collagen-binding domain of a collagenase
PAMMCEDC_00760 2.07e-306 - 3.2.1.172 GH105 G ko:K15532 - ko00000,ko01000 unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
PAMMCEDC_00761 0.0 - 3.2.1.51 GH95 G ko:K15923 ko00511,map00511 ko00000,ko00001,ko01000 COG NOG04001 non supervised orthologous group
PAMMCEDC_00762 3.13e-311 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PAMMCEDC_00763 0.0 - - - L - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00765 7.74e-121 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_00766 2.92e-231 arnC - - M - - - involved in cell wall biogenesis
PAMMCEDC_00767 8.62e-93 - - - S - - - COG NOG30522 non supervised orthologous group
PAMMCEDC_00768 5.69e-171 - - - S - - - COG NOG28307 non supervised orthologous group
PAMMCEDC_00769 7.32e-130 mntP - - P - - - Probably functions as a manganese efflux pump
PAMMCEDC_00770 7.32e-247 apbE 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PAMMCEDC_00771 2.13e-127 marC - - U ko:K05595 - ko00000,ko02000 UPF0056 membrane protein
PAMMCEDC_00772 3.67e-154 - - - K - - - - catabolite gene activator and regulatory subunit of cAMP-dependent protein
PAMMCEDC_00773 0.0 dcp 3.4.15.5, 3.4.24.70 - E ko:K01284,ko:K01414 - ko00000,ko01000,ko01002 Psort location Cytoplasmic, score
PAMMCEDC_00774 1.6e-118 - - - S - - - Domain of unknown function (DUF4847)
PAMMCEDC_00775 4.11e-100 comEB 3.5.4.12 - F ko:K01493 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko02044 deaminase
PAMMCEDC_00776 0.0 ctp 3.4.21.102 - M ko:K03797 - ko00000,ko01000,ko01002 Belongs to the peptidase S41A family
PAMMCEDC_00777 5.02e-115 fthC 6.3.3.2 - H ko:K01934 ko00670,ko01100,map00670,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_00778 5.19e-60 - - - S - - - COG NOG38282 non supervised orthologous group
PAMMCEDC_00779 1.79e-266 recF - - L ko:K03629 ko03440,map03440 ko00000,ko00001,ko03400 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PAMMCEDC_00780 3.82e-156 - - - S - - - Tetratricopeptide repeat protein
PAMMCEDC_00781 4.56e-120 ribH 2.5.1.78 - H ko:K00794 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PAMMCEDC_00785 2.71e-174 - - - S ko:K06911 - ko00000 Belongs to the pirin family
PAMMCEDC_00786 0.0 - - - S - - - Tetratricopeptide repeat
PAMMCEDC_00787 3.54e-299 - - - S - - - Domain of unknown function (DUF4934)
PAMMCEDC_00788 1.02e-187 xth 3.1.11.2 - L ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Psort location Cytoplasmic, score 9.97
PAMMCEDC_00789 3.38e-74 secG - - U ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase SecG subunit
PAMMCEDC_00790 3.44e-160 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00791 1.06e-117 lptE - - S - - - COG NOG14471 non supervised orthologous group
PAMMCEDC_00792 2.2e-295 fhlA - - K - - - Sigma-54 interaction domain protein
PAMMCEDC_00793 0.0 ino1 5.5.1.4 - I ko:K01858 ko00521,ko00562,ko01100,ko01130,map00521,map00562,map01100,map01130 ko00000,ko00001,ko01000 Inositol-3-phosphate synthase
PAMMCEDC_00794 2.11e-219 - - - G - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00795 1.21e-285 fucP - - G ko:K02429 - ko00000,ko02000 L-fucose H symporter permease
PAMMCEDC_00796 1.51e-174 - 3.1.3.102, 3.1.3.104 - S ko:K07025,ko:K20862 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 HAD-hyrolase-like
PAMMCEDC_00797 6.17e-237 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_00798 1.64e-241 - - - I - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_00799 2.45e-211 - - - HJ - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00800 5.43e-166 - - - JM - - - Nucleotidyl transferase
PAMMCEDC_00801 9.93e-266 pdxA 1.1.1.262 - C ko:K00097 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the PdxA family
PAMMCEDC_00802 4.47e-256 - - - L - - - COG NOG11654 non supervised orthologous group
PAMMCEDC_00803 4.81e-253 rlmN 2.1.1.192 - J ko:K06941 - ko00000,ko01000,ko03009 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PAMMCEDC_00804 0.0 - - - M - - - Glycosyltransferase, group 2 family protein
PAMMCEDC_00805 0.0 lytB - - D ko:K06381 - ko00000 SpoIID LytB domain protein
PAMMCEDC_00806 0.0 ampG - - EGP ko:K08218 ko01501,map01501 ko00000,ko00001,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_00808 1.04e-122 - - - S - - - COG NOG27363 non supervised orthologous group
PAMMCEDC_00809 5.17e-123 - - - S - - - Domain of unknown function (DUF4251)
PAMMCEDC_00810 4.49e-143 - - - S - - - Domain of unknown function (DUF4136)
PAMMCEDC_00811 1.52e-160 - - - M - - - Outer membrane protein beta-barrel domain
PAMMCEDC_00812 1.77e-238 - - - T - - - Histidine kinase
PAMMCEDC_00813 1.97e-185 - - - K - - - LytTr DNA-binding domain protein
PAMMCEDC_00814 0.0 - - - M - - - Belongs to the glycosyl hydrolase 28 family
PAMMCEDC_00815 8.14e-203 - - - G - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00816 1.06e-193 murQ 4.2.1.126 - H ko:K07106 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PAMMCEDC_00817 2.39e-163 - - - S ko:K09797 - ko00000 Protein of unknown function (DUF541)
PAMMCEDC_00818 0.0 rpsA - - J ko:K02945 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence
PAMMCEDC_00819 2.22e-81 cspG - - K - - - Cold-shock DNA-binding domain protein
PAMMCEDC_00820 5.77e-200 rnz 3.1.26.11 - S ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PAMMCEDC_00821 3.96e-126 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PAMMCEDC_00822 4.53e-88 - - - S - - - COG NOG23405 non supervised orthologous group
PAMMCEDC_00823 1.41e-93 - - - S - - - COG NOG28735 non supervised orthologous group
PAMMCEDC_00824 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_00825 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_00826 1.39e-185 mazG 3.6.1.66 - S ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_00827 0.0 valS 6.1.1.9 - J ko:K01873 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PAMMCEDC_00828 2.36e-100 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PAMMCEDC_00829 2.77e-116 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PAMMCEDC_00830 2.36e-75 - - - - - - - -
PAMMCEDC_00831 1.58e-95 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00832 1.69e-232 - - - S - - - COG NOG26558 non supervised orthologous group
PAMMCEDC_00833 0.0 secA - - U ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PAMMCEDC_00834 0.0 pafA - - P - - - type I phosphodiesterase nucleotide pyrophosphatase
PAMMCEDC_00835 8.2e-289 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_00836 1.69e-172 coaX 2.7.1.33 - F ko:K03525 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PAMMCEDC_00837 0.0 - - - I - - - Psort location OuterMembrane, score
PAMMCEDC_00838 0.0 - - - S - - - Tetratricopeptide repeat protein
PAMMCEDC_00839 1.06e-152 - - - S - - - Lipopolysaccharide-assembly, LptC-related
PAMMCEDC_00840 8.91e-289 tlyC - - S ko:K03699 - ko00000,ko02042 Psort location CytoplasmicMembrane, score
PAMMCEDC_00841 0.0 ppiD 5.2.1.8 - O ko:K01802,ko:K03770 - ko00000,ko01000,ko03110 COG NOG26630 non supervised orthologous group
PAMMCEDC_00843 1.21e-98 - - - S - - - COG NOG30410 non supervised orthologous group
PAMMCEDC_00844 1.1e-279 madB 4.1.1.3 - C ko:K01572 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000,ko02000 COG COG1883 Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
PAMMCEDC_00845 2.65e-272 - - - M - - - Gram-negative bacterial TonB protein C-terminal
PAMMCEDC_00846 2.04e-253 ilvC 1.1.1.86 - E ko:K00053 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 ketol-acid reductoisomerase
PAMMCEDC_00847 8.74e-182 - 3.1.2.21 - I ko:K01071 ko00061,ko01100,map00061,map01100 ko00000,ko00001,ko01000,ko01004 Acyl-ACP thioesterase
PAMMCEDC_00848 5.82e-124 ilvN 2.2.1.6 - E ko:K01653 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 synthase small subunit
PAMMCEDC_00849 0.0 ilvB 2.2.1.6 - H ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Acetolactate synthase, large subunit
PAMMCEDC_00850 0.0 ilvD 4.2.1.9 - H ko:K01687 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the IlvD Edd family
PAMMCEDC_00851 3.46e-78 - - - S - - - COG NOG30654 non supervised orthologous group
PAMMCEDC_00852 4.25e-128 slyD 5.2.1.8 - G ko:K03775 - ko00000,ko01000,ko03110 Psort location Cytoplasmic, score
PAMMCEDC_00853 4.06e-309 - - - S - - - DNA-binding protein with the Helix-hairpin-helix motif
PAMMCEDC_00854 6.95e-192 - - - L - - - DNA metabolism protein
PAMMCEDC_00855 1.99e-197 truA 5.4.99.12 - J ko:K06173 - ko00000,ko01000,ko03016 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PAMMCEDC_00856 1.15e-161 - - - S - - - COG NOG26960 non supervised orthologous group
PAMMCEDC_00857 2.7e-215 phoH - - T ko:K06217 - ko00000 phosphate starvation-inducible protein
PAMMCEDC_00858 2.22e-229 purC 6.3.2.6 - F ko:K01923 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the SAICAR synthetase family
PAMMCEDC_00859 5.91e-179 menG 2.1.1.163, 2.1.1.201 - H ko:K03183 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PAMMCEDC_00860 5.47e-180 aroE 1.1.1.25 - C ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 COG0169 Shikimate 5-dehydrogenase
PAMMCEDC_00861 5.51e-240 - - - S ko:K06889 - ko00000 of the alpha beta superfamily
PAMMCEDC_00862 2.45e-197 - - - S ko:K06872 - ko00000 COG1512 Beta-propeller domains of methanol dehydrogenase type
PAMMCEDC_00863 1.12e-130 lemA - - S ko:K03744 - ko00000 LemA family
PAMMCEDC_00864 6.94e-262 aroC 4.2.3.5 - E ko:K01736 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PAMMCEDC_00865 0.0 dapE - - E - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00866 7.5e-146 - - - C - - - Nitroreductase family
PAMMCEDC_00867 5.4e-17 - - - - - - - -
PAMMCEDC_00868 6.43e-66 - - - - - - - -
PAMMCEDC_00869 6.03e-128 xpt 2.4.2.22 - F ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000 Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PAMMCEDC_00870 1.52e-299 pbuX - - F ko:K16345 - ko00000,ko02000 xanthine permease
PAMMCEDC_00871 0.0 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00872 8.49e-206 hddC - - JM - - - COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon)
PAMMCEDC_00873 0.0 metH 2.1.1.13 - E ko:K00548 ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PAMMCEDC_00874 1.85e-99 smpB - - O ko:K03664 - ko00000 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PAMMCEDC_00875 2.65e-127 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_00876 1.06e-258 - - - L - - - Phage integrase SAM-like domain
PAMMCEDC_00877 1.71e-06 - - - - - - - -
PAMMCEDC_00878 1.08e-236 - - - S - - - Domain of unknown function (DUF5119)
PAMMCEDC_00879 1.48e-269 - - - S - - - Fimbrillin-like
PAMMCEDC_00880 5.01e-254 - - - S - - - Fimbrillin-like
PAMMCEDC_00881 0.0 - - - - - - - -
PAMMCEDC_00883 2.21e-177 - - - - - - - -
PAMMCEDC_00884 0.0 - - - E ko:K03312 - ko00000,ko02000 Sodium/glutamate symporter
PAMMCEDC_00885 1.04e-115 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00886 1.9e-169 - - - C - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00887 1.65e-242 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00888 9.72e-254 - - - S - - - Domain of unknown function (DUF4857)
PAMMCEDC_00889 3.15e-154 - - - - - - - -
PAMMCEDC_00890 3.77e-216 - - - V ko:K01990,ko:K19340 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 COG1131 ABC-type multidrug transport system ATPase component
PAMMCEDC_00891 5.59e-139 - - - S ko:K09939 - ko00000 Putative PepSY_TM-like
PAMMCEDC_00892 1.41e-129 - - - - - - - -
PAMMCEDC_00893 0.0 - - - - - - - -
PAMMCEDC_00894 1.07e-299 - - - S - - - Protein of unknown function (DUF4876)
PAMMCEDC_00895 0.0 - - - P - - - TonB-dependent Receptor Plug Domain
PAMMCEDC_00896 1.18e-56 - - - - - - - -
PAMMCEDC_00897 6.28e-84 - - - - - - - -
PAMMCEDC_00898 0.0 - - - V ko:K06147 - ko00000,ko02000 COG1132 ABC-type multidrug transport system, ATPase and permease components
PAMMCEDC_00899 6.72e-152 - - - Q - - - ubiE/COQ5 methyltransferase family
PAMMCEDC_00900 0.0 - - - V ko:K06147 - ko00000,ko02000 COG1132 ABC-type multidrug transport system, ATPase and permease components
PAMMCEDC_00901 5.31e-143 - - - K - - - Bacterial regulatory proteins, tetR family
PAMMCEDC_00902 2.08e-122 - - - CO - - - Redoxin
PAMMCEDC_00903 6.36e-277 ynfM - - EGP ko:K08224 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_00904 4.04e-52 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_00905 1.49e-299 - - - S - - - COG NOG26961 non supervised orthologous group
PAMMCEDC_00906 3.6e-241 ldhA 1.1.1.28 - C ko:K03778 ko00620,ko01120,map00620,map01120 ko00000,ko00001,ko01000 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAMMCEDC_00907 1.54e-137 maf - - D ko:K06287 - ko00000 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation
PAMMCEDC_00908 1.16e-124 kdsC 3.1.3.45 - S ko:K03270 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family
PAMMCEDC_00909 2.39e-185 - - - S - - - NADP oxidoreductase coenzyme F420-dependent
PAMMCEDC_00910 1.19e-66 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_00911 2.49e-122 - - - C - - - Nitroreductase family
PAMMCEDC_00912 2.48e-255 - - - V - - - COG NOG22551 non supervised orthologous group
PAMMCEDC_00913 3.06e-94 mce 5.1.99.1 - E ko:K05606 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_00914 0.0 mmdA - - I - - - COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
PAMMCEDC_00915 3.35e-217 - - - C - - - Lamin Tail Domain
PAMMCEDC_00916 1.88e-91 mmdC - - I - - - first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PAMMCEDC_00917 8.17e-266 oadB 4.1.1.3 - C ko:K01572 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000,ko02000 sodium ion-translocating decarboxylase, beta subunit
PAMMCEDC_00918 3.84e-51 - - - G - - - Cyclo-malto-dextrinase C-terminal domain
PAMMCEDC_00919 1.09e-173 ydfG - - S - - - Belongs to the short-chain dehydrogenases reductases (SDR) family
PAMMCEDC_00920 2.64e-209 - 3.1.2.12 CE1 S ko:K01070 ko00680,ko01120,ko01200,map00680,map01120,map01200 ko00000,ko00001,ko01000 esterase
PAMMCEDC_00921 0.0 cadA 3.6.3.3, 3.6.3.5 - P ko:K01534 - ko00000,ko01000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_00922 1.39e-101 - - - P ko:K03711 - ko00000,ko03000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_00923 6.96e-286 - - - I - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_00924 1.49e-132 - - - T - - - Cyclic nucleotide-binding domain protein
PAMMCEDC_00926 1.86e-72 - - - - - - - -
PAMMCEDC_00927 2.02e-97 - - - S - - - Bacterial PH domain
PAMMCEDC_00930 0.0 mutS2 - - L ko:K07456 ko03430,map03430 ko00000,ko00001,ko03400 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PAMMCEDC_00931 3.62e-50 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_00932 3.43e-139 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_00934 2.13e-268 - - - L - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00935 3.42e-180 - - - Q - - - Nodulation protein S (NodS)
PAMMCEDC_00936 1.11e-147 - - - J - - - Acetyltransferase (GNAT) domain
PAMMCEDC_00937 7.25e-123 - - - F - - - adenylate kinase activity
PAMMCEDC_00938 5.4e-124 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PAMMCEDC_00939 2.31e-278 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PAMMCEDC_00940 0.0 - - - P - - - non supervised orthologous group
PAMMCEDC_00941 0.0 - - - E ko:K21572 - ko00000,ko02000 Pfam:SusD
PAMMCEDC_00942 8.51e-289 - - - T - - - COG COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases
PAMMCEDC_00943 3.55e-300 sdaA 4.3.1.17 - E ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko01000 COG1760 L-serine deaminase
PAMMCEDC_00944 1.95e-99 - - - S - - - COG NOG31508 non supervised orthologous group
PAMMCEDC_00945 5.57e-129 - - - S - - - COG NOG28695 non supervised orthologous group
PAMMCEDC_00946 3.53e-158 ktrA - - C ko:K03499 - ko00000,ko02000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_00947 0.0 ktrB - - P ko:K03498 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_00948 0.0 trpB 4.2.1.20 - E ko:K06001 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PAMMCEDC_00949 7e-208 nfo 3.1.21.2 - L ko:K01151 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PAMMCEDC_00950 0.0 - - - S - - - COG NOG10142 non supervised orthologous group
PAMMCEDC_00952 1.99e-281 - - - CO - - - Domain of unknown function (DUF4369)
PAMMCEDC_00953 0.0 - - - S ko:K21572 - ko00000,ko02000 Starch-binding associating with outer membrane
PAMMCEDC_00954 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_00955 0.0 - - - K - - - transcriptional regulator (AraC
PAMMCEDC_00956 4.25e-150 queH 1.17.99.6 - C ko:K09765 - ko00000,ko01000,ko03016 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PAMMCEDC_00959 1.68e-76 cas2 - - L ko:K09951 - ko00000,ko02048 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PAMMCEDC_00960 8.17e-214 cas1 - - L ko:K15342 - ko00000,ko02048,ko03400 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PAMMCEDC_00961 5.55e-196 - - - S - - - COG3943 Virulence protein
PAMMCEDC_00962 0.0 cas9 - - L ko:K09952 - ko00000,ko01000,ko02048 CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
PAMMCEDC_00963 0.0 - - - P ko:K03281 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_00964 3.98e-70 - - - K - - - Winged helix DNA-binding domain
PAMMCEDC_00965 0.0 cdr - - P - - - Belongs to the sulfur carrier protein TusA family
PAMMCEDC_00966 3.84e-313 - - - V - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_00967 0.0 - - - P - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_00968 1.41e-89 ydiI 3.1.2.28 - Q ko:K19222 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Thioesterase superfamily
PAMMCEDC_00969 4.92e-280 entC 5.4.4.2 - HQ ko:K02361,ko:K02552 ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Isochorismate synthase
PAMMCEDC_00970 0.0 menD 2.2.1.9 - H ko:K02551 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
PAMMCEDC_00971 5.72e-200 menB 4.1.3.36 - H ko:K01661 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PAMMCEDC_00972 4.15e-76 - - - S - - - YjbR
PAMMCEDC_00973 2.82e-262 menC - - M - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_00974 7.52e-263 menE 6.2.1.26 - IQ ko:K01911 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_00975 1.26e-211 - - - K - - - helix_turn_helix, arabinose operon control protein
PAMMCEDC_00976 1.87e-36 - - - S - - - COG NOG17973 non supervised orthologous group
PAMMCEDC_00977 0.0 - - - L - - - helicase superfamily c-terminal domain
PAMMCEDC_00978 1.75e-95 - - - - - - - -
PAMMCEDC_00979 6.82e-139 - - - S - - - VirE N-terminal domain
PAMMCEDC_00980 0.0 - - - L - - - Primase C terminal 2 (PriCT-2)
PAMMCEDC_00981 6.02e-49 - - - S - - - Domain of unknown function (DUF4248)
PAMMCEDC_00982 9.01e-121 - - - L - - - regulation of translation
PAMMCEDC_00983 4.9e-126 - - - V - - - Ami_2
PAMMCEDC_00984 0.0 wcaJ_2 2.7.8.6 - M ko:K00996,ko:K03606 ko05111,map05111 ko00000,ko00001,ko01000,ko01005 Psort location CytoplasmicMembrane, score
PAMMCEDC_00985 3.24e-167 - - - S - - - Exopolysaccharide biosynthesis protein YbjH
PAMMCEDC_00986 1.85e-40 - - - M - - - Glycosyltransferase Family 4
PAMMCEDC_00987 3.83e-133 - - - G - - - Glycosyl transferase 4-like domain
PAMMCEDC_00988 1.56e-90 - - - M - - - Glycosyl transferases group 1
PAMMCEDC_00989 5.26e-92 - - - C - - - hydrogenase beta subunit
PAMMCEDC_00990 4.74e-131 - - - M - - - Polysaccharide pyruvyl transferase
PAMMCEDC_00991 1.3e-48 - - - M - - - Glycosyltransferase like family 2
PAMMCEDC_00992 4.29e-48 - - - S - - - Glycosyl transferase family 2
PAMMCEDC_00993 5.01e-13 - - - - - - - -
PAMMCEDC_00994 1.68e-232 glf 5.4.99.9 - M ko:K01854 ko00052,ko00520,map00052,map00520 ko00000,ko00001,ko01000 UDP-galactopyranose mutase
PAMMCEDC_00995 1.52e-158 - - - S - - - Polysaccharide biosynthesis protein
PAMMCEDC_00996 0.0 ptk_3 - - DM - - - Chain length determinant protein
PAMMCEDC_00997 1.88e-181 - - - M ko:K01991 ko02026,map02026 ko00000,ko00001,ko02000 COG1596 Periplasmic protein involved in polysaccharide export
PAMMCEDC_00998 7.67e-105 - - - S - - - phosphatase activity
PAMMCEDC_00999 3.05e-153 - - - K - - - Transcription termination factor nusG
PAMMCEDC_01000 4.45e-305 accC 6.3.4.14, 6.4.1.2, 6.4.1.3 - I ko:K01961,ko:K01965 ko00061,ko00280,ko00620,ko00630,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Biotin carboxylase
PAMMCEDC_01001 6.15e-90 - 6.4.1.1 - I ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Biotin-requiring enzyme
PAMMCEDC_01003 2.48e-70 pckA 4.1.1.49 - H ko:K01610 ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
PAMMCEDC_01004 9.14e-152 - - - C - - - Nitroreductase family
PAMMCEDC_01005 0.0 typA - - T ko:K06207 - ko00000 GTP-binding protein TypA
PAMMCEDC_01006 0.0 - - - T - - - cheY-homologous receiver domain
PAMMCEDC_01007 1.07e-141 - - - S - - - Domain of unknown function (DUF5033)
PAMMCEDC_01008 2.47e-141 - - - M - - - Protein of unknown function (DUF3575)
PAMMCEDC_01009 0.0 - - - M - - - COG NOG23378 non supervised orthologous group
PAMMCEDC_01010 0.0 - - - S - - - Major fimbrial subunit protein type IV, Fimbrillin, C-terminal
PAMMCEDC_01011 9.33e-252 - - - S - - - COG NOG32009 non supervised orthologous group
PAMMCEDC_01012 6.03e-269 - - - - - - - -
PAMMCEDC_01013 0.0 - - - S - - - Domain of unknown function (DUF4906)
PAMMCEDC_01014 4.39e-66 - - - - - - - -
PAMMCEDC_01015 2.2e-65 - - - - - - - -
PAMMCEDC_01016 5.46e-233 - - - CO - - - COG NOG24939 non supervised orthologous group
PAMMCEDC_01017 2.39e-55 rpsO - - J ko:K02956 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PAMMCEDC_01018 4.45e-119 luxS 4.4.1.21 - H ko:K07173 ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111 ko00000,ko00001,ko00002,ko01000 Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PAMMCEDC_01019 9.44e-169 mtnN 3.2.2.9 - F ko:K01243 ko00270,ko01100,ko01230,map00270,map01100,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PAMMCEDC_01020 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_01021 1.47e-183 - - - S - - - Glycosyltransferase, group 2 family protein
PAMMCEDC_01022 9.9e-316 - - - M - - - Glycosyltransferase, group 1 family protein
PAMMCEDC_01023 2.8e-279 - - - M - - - Glycosyl transferases group 1
PAMMCEDC_01024 1.97e-260 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_01025 8.82e-203 licD - - M ko:K07271 - ko00000,ko01000 LicD family
PAMMCEDC_01026 0.0 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60 - M ko:K00991,ko:K21681 ko00040,ko00900,ko01100,ko01110,ko01130,map00040,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the short-chain dehydrogenases reductases (SDR) family
PAMMCEDC_01027 1.2e-198 - - - - - - - -
PAMMCEDC_01028 8.51e-243 - - - S - - - Acyltransferase family
PAMMCEDC_01029 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_01030 0.0 metG 6.1.1.10 - J ko:K01874 ko00450,ko00970,map00450,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PAMMCEDC_01031 1.23e-281 - - - C - - - radical SAM domain protein
PAMMCEDC_01032 1.14e-111 - - - - - - - -
PAMMCEDC_01033 2.57e-114 - - - - - - - -
PAMMCEDC_01035 0.0 comM - - O ko:K07391 - ko00000 Magnesium chelatase, subunit ChlI
PAMMCEDC_01036 1.73e-249 - - - CO - - - AhpC TSA family
PAMMCEDC_01037 0.0 - - - S - - - Tetratricopeptide repeat protein
PAMMCEDC_01038 6.25e-217 xerC - - D ko:K04763 - ko00000,ko03036 Tyrosine recombinase XerC
PAMMCEDC_01039 3.42e-97 aroQ 4.2.1.10 - E ko:K03786 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes a trans-dehydration via an enolate intermediate
PAMMCEDC_01040 0.0 pyk 2.7.1.40 - G ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Pyruvate kinase
PAMMCEDC_01041 2.62e-152 mdmC 2.1.1.104 - S ko:K00588 ko00360,ko00940,ko00941,ko00945,ko01100,ko01110,map00360,map00940,map00941,map00945,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PAMMCEDC_01042 6.56e-70 rbfA - - J ko:K02834 - ko00000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PAMMCEDC_01043 1.85e-282 lolE - - M ko:K09808,ko:K09815 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 COG4591 ABC-type transport system, involved in lipoprotein release, permease component
PAMMCEDC_01044 2.02e-213 pdxK 2.7.1.35 - H ko:K00868 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko01000 Pyridoxal kinase
PAMMCEDC_01045 2.37e-203 murI 5.1.1.3 - M ko:K01776 ko00471,ko01100,map00471,map01100 ko00000,ko00001,ko01000,ko01011 Provides the (R)-glutamate required for cell wall biosynthesis
PAMMCEDC_01046 2.53e-87 ompH - - M ko:K06142 - ko00000 membrane
PAMMCEDC_01047 4.82e-103 ompH - - M ko:K06142 - ko00000 membrane
PAMMCEDC_01048 0.0 yaeT - - M ko:K07277 - ko00000,ko02000,ko03029 Outer membrane protein assembly complex, YaeT protein
PAMMCEDC_01049 3.28e-175 uppS 2.5.1.31 - H ko:K00806 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PAMMCEDC_01050 0.0 - - - G - - - beta-fructofuranosidase activity
PAMMCEDC_01051 4.7e-263 ribD 1.1.1.193, 3.5.4.26 - H ko:K11752 ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024 ko00000,ko00001,ko00002,ko01000 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PAMMCEDC_01052 1.7e-199 prmC 2.1.1.297 - J ko:K02493 - ko00000,ko01000,ko03012 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PAMMCEDC_01053 3.8e-111 recX - - S ko:K03565 - ko00000,ko03400 Modulates RecA activity
PAMMCEDC_01054 1.3e-118 comF 2.4.2.14 - S ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 ComF family
PAMMCEDC_01055 5.07e-150 pyrE 2.4.2.10, 4.1.1.23 - F ko:K00762,ko:K13421 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PAMMCEDC_01056 6.49e-90 - - - S - - - Polyketide cyclase
PAMMCEDC_01057 0.0 argH 4.3.2.1 - E ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Psort location Cytoplasmic, score
PAMMCEDC_01058 6.98e-241 gpr - - C ko:K19265 - ko00000,ko01000 Oxidoreductase, aldo keto reductase family protein
PAMMCEDC_01061 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01062 0.0 - - - E ko:K21572 - ko00000,ko02000 Starch-binding associating with outer membrane
PAMMCEDC_01063 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_01064 0.0 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PAMMCEDC_01065 1.27e-221 - - - I - - - alpha/beta hydrolase fold
PAMMCEDC_01066 0.0 - 3.2.1.51 GH95 G ko:K15923 ko00511,map00511 ko00000,ko00001,ko01000 COG NOG04001 non supervised orthologous group
PAMMCEDC_01067 0.0 - 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Fibronectin type III-like domain
PAMMCEDC_01068 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01069 0.0 - - - E ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_01070 1.46e-142 tag 3.2.2.20 - L ko:K01246 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 COG COG2818 3-methyladenine DNA glycosylase
PAMMCEDC_01071 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_01072 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01073 0.0 - - - M ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_01074 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PAMMCEDC_01075 0.0 - - - S - - - protein conserved in bacteria
PAMMCEDC_01076 0.0 - - - G - - - Glycosyl hydrolases family 43
PAMMCEDC_01077 0.0 - - - S ko:K09955 - ko00000 Beta-L-arabinofuranosidase, GH127
PAMMCEDC_01078 0.0 - - - S ko:K09955 - ko00000 protein conserved in bacteria
PAMMCEDC_01079 1.9e-264 - - - G - - - Glycosyl hydrolases family 32 N-terminal domain
PAMMCEDC_01080 0.0 - - - S ko:K09955 - ko00000 Domain of unknown function
PAMMCEDC_01081 3.1e-51 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_01082 0.0 - - - T - - - Two component regulator propeller
PAMMCEDC_01083 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01084 0.0 - - - K ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_01085 0.0 - - - S - - - COG NOG06097 non supervised orthologous group
PAMMCEDC_01086 0.0 - - - G - - - Beta galactosidase small chain
PAMMCEDC_01087 0.0 - - - H - - - Psort location OuterMembrane, score
PAMMCEDC_01088 0.0 - - - E - - - Domain of unknown function (DUF4374)
PAMMCEDC_01089 4.3e-299 piuB - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_01090 4.96e-218 corA - - P ko:K03284 - ko00000,ko02000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_01091 6.78e-308 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PAMMCEDC_01092 3.51e-136 ahpC 1.11.1.15 - O ko:K03386 ko04214,map04214 ko00000,ko00001,ko01000,ko04147 Psort location Cytoplasmic, score
PAMMCEDC_01093 0.0 ahpF - - C ko:K03387 - ko00000,ko01000 alkyl hydroperoxide reductase subunit F
PAMMCEDC_01094 6.73e-243 - - - K ko:K02529 - ko00000,ko03000 Psort location Cytoplasmic, score 9.97
PAMMCEDC_01095 0.0 - 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 Glycosyl hydrolase family 35
PAMMCEDC_01096 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PAMMCEDC_01097 5.42e-284 - - - P ko:K07214 - ko00000 Putative esterase
PAMMCEDC_01098 0.0 - 3.2.1.89 - G ko:K01224 - ko00000,ko01000 Glycosyl hydrolase family 53
PAMMCEDC_01099 0.0 - - - T - - - cheY-homologous receiver domain
PAMMCEDC_01100 0.0 - - - G ko:K07214 - ko00000 Putative esterase
PAMMCEDC_01101 1.25e-197 - - - S ko:K06889 - ko00000 Serine aminopeptidase, S33
PAMMCEDC_01102 2.19e-87 - - - S - - - Protein of unknown function (DUF3237)
PAMMCEDC_01103 0.0 - - - M ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_01104 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01106 0.0 - - - G - - - Belongs to the glycosyl hydrolase 5 (cellulase A) family
PAMMCEDC_01107 5.32e-40 bgaA 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 beta-galactosidase activity
PAMMCEDC_01108 0.0 - - - G - - - Histidine phosphatase superfamily (branch 2)
PAMMCEDC_01109 0.0 - - - G - - - Glycosyl hydrolase family 92
PAMMCEDC_01110 0.0 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PAMMCEDC_01111 0.0 - - - G - - - Glycosyl hydrolase family 92
PAMMCEDC_01112 1.63e-193 - 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 COG0584 Glycerophosphoryl diester phosphodiesterase
PAMMCEDC_01113 0.0 - - - M ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_01114 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01115 2.19e-272 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_01116 0.0 - 3.2.1.50 - G ko:K01205 ko00531,ko01100,ko04142,map00531,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko04147 Alpha-N-acetylglucosaminidase
PAMMCEDC_01117 1.59e-155 - - - T - - - Two component regulator propeller
PAMMCEDC_01118 0.0 - - - T - - - Two component regulator propeller
PAMMCEDC_01121 2.24e-236 - - - G - - - Kinase, PfkB family
PAMMCEDC_01122 0.0 prc 3.4.21.102 - M ko:K03797 - ko00000,ko01000,ko01002 Belongs to the peptidase S41A family
PAMMCEDC_01123 0.0 - - - P - - - Outer membrane protein beta-barrel family
PAMMCEDC_01124 0.0 - 2.7.13.3 - T ko:K07636 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_01125 8.7e-166 - - - K - - - COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PAMMCEDC_01126 4.37e-220 - - - J - - - Acetyltransferase (GNAT) domain
PAMMCEDC_01127 4.78e-115 - - - M ko:K11934 - ko00000,ko02000 Outer membrane protein beta-barrel domain
PAMMCEDC_01128 3.64e-104 dapH - - S - - - Bacterial transferase hexapeptide repeat protein
PAMMCEDC_01129 0.0 - 3.4.11.9 - E ko:K01262 - ko00000,ko01000,ko01002 COG0006 Xaa-Pro aminopeptidase
PAMMCEDC_01130 4.23e-33 rpsU - - J ko:K02970 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bS21 family
PAMMCEDC_01131 5.52e-208 xerC - - D ko:K03733 - ko00000,ko03036 Belongs to the 'phage' integrase family. XerC subfamily
PAMMCEDC_01132 3.88e-61 raiA - - J ko:K05808 - ko00000,ko03009 Ribosomal subunit interface protein
PAMMCEDC_01137 8.89e-290 tuf - - J ko:K02358 - ko00000,ko03012,ko03029,ko04147 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PAMMCEDC_01138 2.44e-207 purU 3.5.1.10 - F ko:K01433 ko00630,ko00670,map00630,map00670 ko00000,ko00001,ko01000 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4)
PAMMCEDC_01139 1.48e-141 hisH - - E ko:K02501 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PAMMCEDC_01140 2.59e-170 hisA 5.3.1.16 - E ko:K01814 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PAMMCEDC_01141 1.45e-182 hisF - - E ko:K02500 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PAMMCEDC_01142 4.73e-146 hisI 3.5.4.19, 3.6.1.31 - E ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 belongs to the PRA-CH family
PAMMCEDC_01143 1.23e-174 ftsE - - D ko:K09812 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03036 Psort location CytoplasmicMembrane, score 7.88
PAMMCEDC_01144 9.47e-317 lysC 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the aspartokinase family
PAMMCEDC_01145 7.54e-287 lysA 4.1.1.20 - E ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PAMMCEDC_01146 3.09e-118 - - - S - - - COG NOG28134 non supervised orthologous group
PAMMCEDC_01147 3.87e-284 - - - M - - - Glycosyltransferase, group 2 family protein
PAMMCEDC_01148 3.48e-58 ycnE - - S - - - Antibiotic biosynthesis monooxygenase
PAMMCEDC_01150 2.33e-57 - - - S - - - Pfam:DUF340
PAMMCEDC_01152 2.79e-294 lolE_1 - - M ko:K09808 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 COG4591 ABC-type transport system, involved in lipoprotein release, permease component
PAMMCEDC_01153 3.11e-310 aspC 2.6.1.1, 2.6.1.2, 2.6.1.66 - E ko:K00812,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I II
PAMMCEDC_01154 3.32e-305 - - - G - - - COG2407 L-fucose isomerase and related
PAMMCEDC_01155 5e-111 - - - S - - - COG NOG14445 non supervised orthologous group
PAMMCEDC_01156 4.27e-147 yggS - - S ko:K06997 - ko00000 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PAMMCEDC_01157 4.63e-227 preA 1.3.98.1 - F ko:K00226 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of dihydroorotate to orotate
PAMMCEDC_01158 0.0 - 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 Psort location CytoplasmicMembrane, score
PAMMCEDC_01159 1.51e-144 - - - S - - - Peptidase C14 caspase catalytic subunit p20
PAMMCEDC_01160 0.0 - - - M - - - Domain of unknown function (DUF3943)
PAMMCEDC_01161 7.6e-133 - - - T - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_01162 0.0 - - - E - - - Peptidase family C69
PAMMCEDC_01163 1.18e-295 - 3.4.22.40 - M ko:K01372 - ko00000,ko01000,ko01002 Papain family cysteine protease
PAMMCEDC_01164 0.0 - 3.4.14.5 - EU ko:K01278 ko04974,map04974 ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 Dipeptidyl peptidase IV (DPP IV) N-terminal region
PAMMCEDC_01165 0.0 - - - S - - - Capsule assembly protein Wzi
PAMMCEDC_01166 9.85e-88 - - - S - - - Lipocalin-like domain
PAMMCEDC_01167 0.0 aspA 4.3.1.1 - E ko:K01744 ko00250,ko01100,map00250,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 9.97
PAMMCEDC_01168 4.9e-208 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_01169 0.0 - - - S - - - COG NOG28036 non supervised orthologous group
PAMMCEDC_01170 3.12e-251 galE 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family
PAMMCEDC_01171 6.77e-216 - - - M - - - Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PAMMCEDC_01172 7.14e-126 rnfA - - C ko:K03617 - ko00000 Part of a membrane complex involved in electron transport
PAMMCEDC_01173 9.52e-128 rnfE - - C ko:K03613 - ko00000 Part of a membrane complex involved in electron transport
PAMMCEDC_01174 2.91e-163 rnfG - - C ko:K03612 - ko00000 Part of a membrane complex involved in electron transport
PAMMCEDC_01175 6.64e-234 rnfD - - C ko:K03614 - ko00000 Part of a membrane complex involved in electron transport
PAMMCEDC_01176 0.0 rnfC - - C ko:K03615 - ko00000 Part of a membrane complex involved in electron transport
PAMMCEDC_01177 8.59e-180 rnfB - - C ko:K03616 - ko00000 Ferredoxin
PAMMCEDC_01178 1.2e-101 - - - T ko:K03803 - ko00000,ko03021 Positive regulator of sigma(E), RseC MucC
PAMMCEDC_01179 6.63e-278 ilvA 4.3.1.19 - E ko:K01754 ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Pyridoxal-phosphate dependent enzyme
PAMMCEDC_01180 9.76e-204 - - - EG - - - COG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PAMMCEDC_01181 2.95e-264 - - - P - - - Transporter, major facilitator family protein
PAMMCEDC_01182 0.0 gadB 4.1.1.15, 4.1.2.27 - E ko:K01580,ko:K01634 ko00250,ko00410,ko00430,ko00600,ko00650,ko01100,ko01110,ko01120,ko02024,ko04071,ko04727,ko04940,map00250,map00410,map00430,map00600,map00650,map01100,map01110,map01120,map02024,map04071,map04727,map04940 ko00000,ko00001,ko00002,ko01000 Belongs to the group II decarboxylase family
PAMMCEDC_01183 2.23e-232 glsA 3.5.1.2 - E ko:K01425 ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230 ko00000,ko00001,ko01000 Belongs to the glutaminase family
PAMMCEDC_01185 2.27e-188 cutC - - P ko:K06201 - ko00000 Participates in the control of copper homeostasis
PAMMCEDC_01186 0.0 - - - E - - - Transglutaminase-like protein
PAMMCEDC_01187 3.66e-168 - - - U - - - Potassium channel protein
PAMMCEDC_01189 0.0 gadC - - E ko:K20265 ko02024,map02024 ko00000,ko00001,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_01190 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_01191 1.86e-316 nhaA - - P ko:K03313 - ko00000,ko02000 ) H( ) antiporter that extrudes sodium in exchange for external protons
PAMMCEDC_01192 0.0 lepA - - M ko:K03596 ko05134,map05134 ko00000,ko00001 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PAMMCEDC_01193 1.28e-85 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_01194 1.85e-40 - - - S - - - COG NOG33517 non supervised orthologous group
PAMMCEDC_01195 4.97e-126 - - - S - - - COG NOG16874 non supervised orthologous group
PAMMCEDC_01196 4.3e-229 hprA 1.1.1.29 - C ko:K00018 ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAMMCEDC_01197 1.93e-302 rarA - - L ko:K07478 - ko00000 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase
PAMMCEDC_01198 0.0 - - - S - - - amine dehydrogenase activity
PAMMCEDC_01199 1.5e-256 - - - S - - - amine dehydrogenase activity
PAMMCEDC_01200 1.05e-48 - - - S - - - Domain of unknown function (DUF4248)
PAMMCEDC_01201 1.13e-108 - - - L - - - DNA-binding protein
PAMMCEDC_01203 9.61e-71 - - - - - - - -
PAMMCEDC_01204 0.0 - 3.6.4.12 - L ko:K17680 - ko00000,ko01000,ko03029 Psort location Cytoplasmic, score 8.96
PAMMCEDC_01205 7.19e-270 - - - S - - - Domain of unknown function (DUF4373)
PAMMCEDC_01206 1.55e-46 - - - - - - - -
PAMMCEDC_01207 5.22e-208 - - - S - - - Exopolysaccharide biosynthesis protein YbjH
PAMMCEDC_01208 3.07e-180 - 2.4.1.187 GT26 M ko:K05946 ko05111,map05111 ko00000,ko00001,ko01000,ko01003 Glycosyl transferase WecB/TagA/CpsF family
PAMMCEDC_01209 5.36e-252 - - - M - - - Glycosyltransferase, group 1 family protein
PAMMCEDC_01210 8.42e-236 - - - S - - - Glycosyltransferase, group 2 family protein
PAMMCEDC_01211 2.75e-244 - - - M - - - Glycosyltransferase like family 2
PAMMCEDC_01212 0.0 - - - - - - - -
PAMMCEDC_01213 3.24e-291 - - - M ko:K00713 - ko00000,ko01000,ko01003,ko01005 Glycosyl transferases group 1
PAMMCEDC_01214 0.0 - - - S - - - Polysaccharide biosynthesis protein
PAMMCEDC_01215 3.48e-246 - - - G - - - Glycosyltransferase family 52
PAMMCEDC_01216 2.15e-169 pseF - - M - - - Psort location Cytoplasmic, score
PAMMCEDC_01217 0.0 - 4.1.3.39 - E ko:K01666 ko00360,ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00360,map00362,map00621,map00622,map01100,map01120,map01220 br01602,ko00000,ko00001,ko00002,ko01000 HMGL-like
PAMMCEDC_01219 1.53e-14 - 2.7.8.6 - M ko:K00996,ko:K03606 ko05111,map05111 ko00000,ko00001,ko01000,ko01005 Psort location CytoplasmicMembrane, score
PAMMCEDC_01220 1.62e-17 - - - S - - - toxin-antitoxin system toxin component, PIN family
PAMMCEDC_01221 7.68e-47 - - - - - - - -
PAMMCEDC_01222 9.99e-270 - - - K - - - Participates in transcription elongation, termination and antitermination
PAMMCEDC_01223 9.37e-55 - - - S - - - Protein of unknown function DUF86
PAMMCEDC_01224 9.13e-20 - - - S - - - Protein of unknown function DUF86
PAMMCEDC_01225 2.1e-64 - - - S ko:K07075 - ko00000 Nucleotidyltransferase domain
PAMMCEDC_01226 0.0 - - - M - - - COG NOG06397 non supervised orthologous group
PAMMCEDC_01227 1.81e-158 - - - P ko:K02039 - ko00000 Plays a role in the regulation of phosphate uptake
PAMMCEDC_01228 2.14e-179 pstB 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PAMMCEDC_01229 5.93e-204 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_01230 2.39e-274 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
PAMMCEDC_01231 2.91e-188 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 COG0226 ABC-type phosphate transport system, periplasmic component
PAMMCEDC_01232 0.0 glnS 6.1.1.18 - J ko:K01886 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Glutamine--tRNA ligase
PAMMCEDC_01233 0.0 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_01234 1.33e-134 dedA - - S - - - SNARE associated Golgi protein
PAMMCEDC_01235 5.33e-114 tpx 1.11.1.15 - O ko:K11065 - ko00000,ko01000 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PAMMCEDC_01236 8.18e-269 fcl 1.1.1.271 - GM ko:K02377 ko00051,ko00520,ko01100,map00051,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction
PAMMCEDC_01237 2.11e-266 gmd 4.2.1.47 - M ko:K01711 ko00051,ko00520,ko01100,map00051,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
PAMMCEDC_01238 2.34e-267 manC 2.7.7.13 - M ko:K00971 ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110 ko00000,ko00001,ko00002,ko01000 mannose-1-phosphate guanylyltransferase
PAMMCEDC_01239 0.0 - 2.7.8.6 - M ko:K00996,ko:K03606 ko05111,map05111 ko00000,ko00001,ko01000,ko01005 Psort location CytoplasmicMembrane, score
PAMMCEDC_01240 7.31e-214 rmlA 2.7.7.24 - H ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PAMMCEDC_01241 4.11e-140 rfbC 5.1.3.13 - G ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PAMMCEDC_01242 1.81e-254 - - - M - - - Chain length determinant protein
PAMMCEDC_01243 0.0 kpsD - - M - - - COG1596 Periplasmic protein involved in polysaccharide export
PAMMCEDC_01244 0.0 xylA 5.3.1.5 - G ko:K01805 ko00040,ko00051,ko01100,map00040,map00051,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PAMMCEDC_01245 0.0 xylB_2 2.7.1.17 - G ko:K00854 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 Carbohydrate kinase, FGGY family protein
PAMMCEDC_01246 1.23e-186 - - - F - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_01247 2.99e-82 - - - T - - - COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PAMMCEDC_01248 3.84e-278 - - - M - - - COG COG2148 Sugar transferases involved in lipopolysaccharide synthesis
PAMMCEDC_01249 1.1e-195 - - - MU - - - COG NOG27134 non supervised orthologous group
PAMMCEDC_01250 0.0 - - - M - - - COG NOG36677 non supervised orthologous group
PAMMCEDC_01251 0.0 - - - M - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_01252 8.65e-225 - - - S ko:K07011 - ko00000 Glycosyltransferase, group 2 family protein
PAMMCEDC_01253 2.63e-265 - - - M - - - Glycosyl transferase family group 2
PAMMCEDC_01254 6.27e-270 - - - M - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_01255 3.77e-138 - - - S - - - Psort location Cytoplasmic, score 9.26
PAMMCEDC_01256 2.63e-201 - - - M - - - Domain of unknown function (DUF4422)
PAMMCEDC_01257 6.14e-232 - - - M - - - Glycosyltransferase like family 2
PAMMCEDC_01258 1.84e-195 - - - S - - - Glycosyltransferase, group 2 family protein
PAMMCEDC_01259 2.35e-215 - - - - - - - -
PAMMCEDC_01260 1.6e-309 rfbB - - GM ko:K09691 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ATPases associated with a variety of cellular activities
PAMMCEDC_01261 1.41e-207 - - - GM ko:K09690 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC-2 type transporter
PAMMCEDC_01262 4.07e-290 - - - M - - - Glycosyltransferase Family 4
PAMMCEDC_01263 5.07e-236 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_01264 3.23e-247 - - - M - - - Glycosyltransferase
PAMMCEDC_01265 3.3e-283 - - - M - - - Glycosyl transferases group 1
PAMMCEDC_01266 2.23e-282 - - - M - - - Glycosyl transferases group 1
PAMMCEDC_01267 2.81e-282 - - - M - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_01268 8.41e-282 - - - M - - - Glycosyltransferase, group 1 family protein
PAMMCEDC_01269 1.64e-197 - - - Q - - - Methionine biosynthesis protein MetW
PAMMCEDC_01270 2.74e-206 - - - M - - - Glycosyltransferase, group 2 family protein
PAMMCEDC_01271 3.11e-272 - - - M - - - Psort location Cytoplasmic, score
PAMMCEDC_01272 4.41e-289 - - - M - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_01273 9.39e-80 - - - KT - - - Response regulator receiver domain
PAMMCEDC_01274 3.09e-210 - - - K - - - methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC XylS family) K00567
PAMMCEDC_01275 6.21e-206 - - - S - - - RteC protein
PAMMCEDC_01276 5.83e-67 - - - S - - - Helix-turn-helix domain
PAMMCEDC_01277 2.4e-75 - - - S - - - Helix-turn-helix domain
PAMMCEDC_01278 5.8e-248 - - - S - - - Protein of unknown function (DUF1016)
PAMMCEDC_01279 0.0 - - - L - - - Helicase conserved C-terminal domain
PAMMCEDC_01280 3.9e-105 - - - S - - - Domain of unknown function (DUF1896)
PAMMCEDC_01281 0.0 - 5.99.1.2 - L ko:K03169 - ko00000,ko01000,ko03032 DNA topoisomerase
PAMMCEDC_01282 0.0 - - - S - - - Susd and RagB outer membrane lipoprotein
PAMMCEDC_01283 0.0 - - - P ko:K02014 - ko00000,ko02000 TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01284 1.17e-291 - - - S ko:K07133 - ko00000 AAA domain
PAMMCEDC_01285 0.0 - - - S - - - Susd and RagB outer membrane lipoprotein
PAMMCEDC_01286 0.0 - - - P ko:K02014 - ko00000,ko02000 TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01287 3.98e-277 - - - L - - - Arm DNA-binding domain
PAMMCEDC_01292 2.01e-65 - - - S - - - Protein of unknown function (DUF1622)
PAMMCEDC_01293 3.43e-128 cobC 3.1.3.73 - G ko:K02226 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_01294 1.69e-180 cobS 2.7.8.26 - H ko:K02233 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
PAMMCEDC_01295 1.82e-255 cobT 2.4.2.21 - F ko:K00768 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB)
PAMMCEDC_01296 1.93e-117 cobU 2.7.1.156, 2.7.7.62 - H ko:K02231 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 bifunctional cobalamin biosynthesis protein
PAMMCEDC_01297 4.34e-121 - - - T - - - FHA domain protein
PAMMCEDC_01298 5.7e-261 - - - S - - - Sporulation and cell division repeat protein
PAMMCEDC_01299 0.0 ugd 1.1.1.22 - C ko:K00012 ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PAMMCEDC_01300 9.83e-191 - - - S - - - COG NOG26711 non supervised orthologous group
PAMMCEDC_01301 1.24e-297 deaD - - L - - - Belongs to the DEAD box helicase family
PAMMCEDC_01302 6.27e-289 serB 3.1.3.3 - ET ko:K01079 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01009 Psort location Cytoplasmic, score 8.96
PAMMCEDC_01303 2.36e-111 - - - O - - - COG NOG28456 non supervised orthologous group
PAMMCEDC_01304 4.55e-150 - 3.1.3.10, 3.1.3.104 - S ko:K07025,ko:K20866,ko:K21063 ko00010,ko00740,ko01100,ko01110,ko01120,map00010,map00740,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000 HAD hydrolase, family IA, variant 3
PAMMCEDC_01305 7.16e-278 lptG - - S ko:K11720 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Permease, YjgP YjgQ family
PAMMCEDC_01306 4.69e-285 tgt 2.4.2.29 - F ko:K00773 - ko00000,ko01000,ko03016 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PAMMCEDC_01307 0.0 lon 3.4.21.53 - O ko:K01338 ko04112,map04112 ko00000,ko00001,ko01000,ko01002 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
PAMMCEDC_01308 8.38e-169 smtA 2.1.1.223 - J ko:K15460 - ko00000,ko01000,ko03016 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
PAMMCEDC_01309 1.22e-248 - - - I - - - lipid kinase, YegS Rv2252 BmrU family
PAMMCEDC_01310 1.66e-290 bioF 2.3.1.29, 2.3.1.47 - E ko:K00639,ko:K00652 ko00260,ko00780,ko01100,map00260,map00780,map01100 ko00000,ko00001,ko00002,ko01000,ko01007 Beta-eliminating lyase
PAMMCEDC_01311 6.08e-197 - - - EG - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_01312 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
PAMMCEDC_01313 1.75e-156 - - - V ko:K02003 - ko00000,ko00002,ko02000 bacteriocin export ABC transporter, lactococcin 972 group
PAMMCEDC_01314 0.0 - - - V - - - MacB-like periplasmic core domain
PAMMCEDC_01315 0.0 - - - V - - - Efflux ABC transporter, permease protein
PAMMCEDC_01316 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_01317 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_01318 3e-274 - - - M ko:K02005 - ko00000 Efflux transporter, RND family, MFP subunit
PAMMCEDC_01319 0.0 - - - MU - - - Psort location OuterMembrane, score
PAMMCEDC_01320 1.16e-64 - - - KLT ko:K07126 - ko00000 COG0790 FOG TPR repeat, SEL1 subfamily
PAMMCEDC_01321 0.0 - - - T - - - Sigma-54 interaction domain protein
PAMMCEDC_01322 2.81e-316 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_01324 5.03e-34 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_01325 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01326 0.0 - - - E ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_01327 7.77e-120 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_01328 8.68e-195 - - - K - - - helix_turn_helix, arabinose operon control protein
PAMMCEDC_01329 3.95e-273 bcr - - EGP ko:K03446,ko:K07552 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score
PAMMCEDC_01330 9.52e-204 - - - K - - - helix_turn_helix, arabinose operon control protein
PAMMCEDC_01331 1.58e-132 - - - S - - - COG NOG27363 non supervised orthologous group
PAMMCEDC_01333 2.79e-125 - - - V ko:K03296 - ko00000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMMCEDC_01334 6.28e-217 - - - H - - - Glycosyltransferase, family 11
PAMMCEDC_01335 9.97e-119 fldA - - C ko:K03839 - ko00000 Low-potential electron donor to a number of redox enzymes
PAMMCEDC_01336 2.24e-81 - - - S - - - Protein of unknown function (DUF2023)
PAMMCEDC_01338 1.88e-24 - - - - - - - -
PAMMCEDC_01339 1.36e-65 - - - CO ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Thioredoxin
PAMMCEDC_01340 0.0 aspS 6.1.1.12 - J ko:K01876 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PAMMCEDC_01341 5.93e-124 ogt 2.1.1.63 - H ko:K00567,ko:K10778 - ko00000,ko01000,ko03000,ko03400 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PAMMCEDC_01342 2.84e-130 - - - S - - - Domain of unknown function (DUF4251)
PAMMCEDC_01343 6.07e-222 - 3.5.1.53 - S ko:K12251 ko00330,ko01100,map00330,map01100 ko00000,ko00001,ko01000 hydrolase, carbon-nitrogen family
PAMMCEDC_01344 8.71e-261 aguA 3.5.3.12 - E ko:K10536 ko00330,ko01100,map00330,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_01345 0.0 - - - S - - - Psort location OuterMembrane, score 9.49
PAMMCEDC_01346 2.28e-127 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_01347 0.0 nhaC - - C ko:K03315 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_01348 0.0 pepC 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
PAMMCEDC_01349 1.83e-188 - - - - - - - -
PAMMCEDC_01350 0.0 rfbH 1.17.1.1 - E ko:K12452 ko00520,map00520 ko00000,ko00001,ko01000 DegT/DnrJ/EryC1/StrS aminotransferase family
PAMMCEDC_01351 5.27e-189 rfbF 2.7.7.33 - JM ko:K00978 ko00500,ko00520,ko01100,map00500,map00520,map01100 ko00000,ko00001,ko01000 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon)
PAMMCEDC_01355 5.03e-257 rfbG 4.2.1.45 - M ko:K01709 ko00520,map00520 ko00000,ko00001,ko01000 Polysaccharide biosynthesis protein
PAMMCEDC_01356 7.34e-184 - - - GM - - - GDP-mannose 4,6 dehydratase
PAMMCEDC_01357 6.11e-102 - - - S - - - Polysaccharide biosynthesis protein
PAMMCEDC_01358 4.71e-127 - - - S - - - Glycosyl transferase family 2
PAMMCEDC_01359 1.07e-60 - - - M - - - Glycosyltransferase like family 2
PAMMCEDC_01361 8.3e-76 - - - M - - - Glycosyl transferase family 2
PAMMCEDC_01362 4.44e-60 - - - E - - - haloacid dehalogenase-like hydrolase
PAMMCEDC_01363 9.35e-45 - - - - - - - -
PAMMCEDC_01365 1.13e-92 gtb - - M - - - transferase activity, transferring glycosyl groups
PAMMCEDC_01366 4.73e-90 - - - M - - - Glycosyltransferase Family 4
PAMMCEDC_01367 2.48e-228 - - - M - - - Domain of unknown function (DUF1972)
PAMMCEDC_01368 3.12e-167 - - - S - - - Exopolysaccharide biosynthesis protein YbjH
PAMMCEDC_01369 3.87e-237 iaaA 3.4.19.5 - E ko:K13051 - ko00000,ko01000,ko01002 Asparaginase
PAMMCEDC_01370 0.0 - - - G - - - Glycosyl hydrolase family 2, sugar binding domain protein
PAMMCEDC_01371 0.0 - - - M - - - Right handed beta helix region
PAMMCEDC_01372 2.97e-208 - - - S - - - Pkd domain containing protein
PAMMCEDC_01373 3.44e-176 - - - G - - - Domain of unknown function (DUF4450)
PAMMCEDC_01374 0.0 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PAMMCEDC_01375 0.0 - - - E - - - GDSL-like Lipase/Acylhydrolase family
PAMMCEDC_01376 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PAMMCEDC_01377 0.0 - - - G - - - F5/8 type C domain
PAMMCEDC_01378 0.0 - 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 Beta-galactosidase trimerisation domain
PAMMCEDC_01379 3.76e-296 - - - G - - - unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
PAMMCEDC_01380 0.0 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PAMMCEDC_01381 0.0 - 4.2.2.23 PL11 S ko:K18197 - ko00000,ko01000 candidate rhamnogalacturonan lyase, polysaccharide lyase family 11 protein K01238
PAMMCEDC_01382 0.0 - - - S - - - alpha beta
PAMMCEDC_01383 0.0 - - - G - - - Alpha-L-rhamnosidase
PAMMCEDC_01384 9.18e-74 - - - - - - - -
PAMMCEDC_01385 0.0 - - - E ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_01386 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01387 6.32e-67 - - - T - - - His Kinase A (phosphoacceptor) domain
PAMMCEDC_01388 2.06e-46 - - - T - - - Histidine kinase
PAMMCEDC_01389 4.75e-92 - - - T - - - Histidine kinase-like ATPases
PAMMCEDC_01390 4.54e-306 - - - O - - - Glycosyl Hydrolase Family 88
PAMMCEDC_01391 0.0 nuoN 1.6.5.3 - C ko:K00343 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PAMMCEDC_01392 0.0 nuoM 1.6.5.3 - C ko:K00342 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 proton-translocating NADH-quinone oxidoreductase, chain M
PAMMCEDC_01393 0.0 nuoL 1.6.5.3 - CP ko:K00341 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter MnhA subunit
PAMMCEDC_01394 1.18e-58 nuoK 1.6.5.3 - C ko:K00340 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PAMMCEDC_01395 1.58e-106 ndhG 1.6.5.3 - C ko:K00339 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 subunit 6
PAMMCEDC_01396 1.11e-91 nuoI 1.6.5.3 - C ko:K00338 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PAMMCEDC_01397 1.18e-253 nuoH 1.6.5.3 - C ko:K00337 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
PAMMCEDC_01398 0.0 nuoC 1.6.5.3 - C ko:K00333,ko:K13378 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PAMMCEDC_01399 1.53e-144 nuoB 1.6.5.3 - C ko:K00331 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PAMMCEDC_01400 5.7e-71 nuoA 1.6.5.3 - C ko:K00330 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PAMMCEDC_01401 3.58e-85 - - - - - - - -
PAMMCEDC_01402 0.0 trkH - - P ko:K03498 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_01403 0.0 trkA - - C ko:K03499 - ko00000,ko02000 COG0569 K transport systems NAD-binding component
PAMMCEDC_01404 0.0 dxs 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PAMMCEDC_01405 1.31e-244 - - - E - - - GSCFA family
PAMMCEDC_01406 0.0 alr 5.1.1.1 - M ko:K01775 ko00473,ko01100,ko01502,map00473,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PAMMCEDC_01407 3.93e-128 - - - S - - - Domain of unknown function (DUF4858)
PAMMCEDC_01409 0.0 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PAMMCEDC_01410 0.0 - - - G - - - beta-galactosidase
PAMMCEDC_01411 0.0 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PAMMCEDC_01412 2.62e-175 - - - E - - - GDSL-like Lipase/Acylhydrolase
PAMMCEDC_01414 0.0 - - - P - - - Protein of unknown function (DUF229)
PAMMCEDC_01415 0.0 - - - E ko:K21572 - ko00000,ko02000 Pfam:SusD
PAMMCEDC_01416 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01417 2.87e-221 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PAMMCEDC_01418 4.5e-121 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor, ECF subfamily
PAMMCEDC_01419 1.83e-277 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_01420 0.0 - - - G - - - Glycosyl hydrolase family 92
PAMMCEDC_01421 2.41e-190 - - - S - - - of the HAD superfamily
PAMMCEDC_01422 2.49e-256 proB 2.7.2.11 - E ko:K00931 ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PAMMCEDC_01423 1.53e-304 proA 1.2.1.41 - E ko:K00147 ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PAMMCEDC_01424 1.35e-238 argF 2.1.3.11, 2.1.3.9 - E ko:K09065,ko:K13043 ko00220,ko01100,ko01230,map00220,map01100,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
PAMMCEDC_01425 7.94e-90 glpE - - P - - - Rhodanese-like protein
PAMMCEDC_01426 4.7e-157 - - - S - - - COG NOG31798 non supervised orthologous group
PAMMCEDC_01427 5.27e-282 - - - I - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_01428 3.86e-235 ddl 6.3.2.4 - F ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Belongs to the D-alanine--D-alanine ligase family
PAMMCEDC_01429 4.57e-271 rluD 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
PAMMCEDC_01430 6.66e-151 spk1 2.7.11.1, 6.3.2.4 - S ko:K01921,ko:K08884,ko:K12132 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01001,ko01011 PASTA domain protein
PAMMCEDC_01431 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_01432 2.52e-51 - - - S - - - RNA recognition motif
PAMMCEDC_01433 0.0 - - - T - - - COG COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
PAMMCEDC_01434 0.0 xynB - - I - - - pectin acetylesterase
PAMMCEDC_01436 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01437 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_01438 0.0 - - - P - - - COG COG3119 Arylsulfatase A and related enzymes
PAMMCEDC_01439 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
PAMMCEDC_01440 0.0 lacZ 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 COG3250 Beta-galactosidase beta-glucuronidase
PAMMCEDC_01441 0.0 - 3.2.1.51 GH29 G ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 F5 8 type C domain protein
PAMMCEDC_01442 0.0 - - - - - - - -
PAMMCEDC_01443 2.6e-184 phoN 3.1.3.2 - I ko:K09474 ko00740,ko01100,ko02020,map00740,map01100,map02020 ko00000,ko00001,ko01000 Acid phosphatase homologues
PAMMCEDC_01445 8.34e-277 - - - P ko:K07221 - ko00000,ko02000 Phosphate-selective porin O and P
PAMMCEDC_01446 0.0 atsB - - C ko:K06871 - ko00000 COG0641 Arylsulfatase regulator (Fe-S oxidoreductase)
PAMMCEDC_01447 1.39e-26 rpmH - - J ko:K02914 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL34 family
PAMMCEDC_01448 4.61e-132 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PAMMCEDC_01449 1.65e-243 - - - M - - - Psort location CytoplasmicMembrane, score 9.46
PAMMCEDC_01450 1.69e-161 radC - - E ko:K03630 - ko00000 Belongs to the UPF0758 family
PAMMCEDC_01451 1.58e-70 yitW - - S - - - FeS assembly SUF system protein
PAMMCEDC_01452 1.03e-193 lpxH 3.6.1.54 - S ko:K03269 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Psort location Cytoplasmic, score
PAMMCEDC_01453 2.59e-270 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAMMCEDC_01454 1.83e-235 pta 2.3.1.8 - C ko:K00625,ko:K13788 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PAMMCEDC_01455 3.29e-75 lrgA - - S ko:K06518 - ko00000,ko02000 Psort location CytoplasmicMembrane, score
PAMMCEDC_01456 3.6e-148 lrgB - - M - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_01457 1.55e-222 - - - S ko:K01163 - ko00000 Conserved protein
PAMMCEDC_01458 7.09e-253 - - - S - - - Acetyltransferase (GNAT) domain
PAMMCEDC_01459 3.5e-171 dacA - - S - - - Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PAMMCEDC_01460 1.35e-204 folP 2.5.1.15 - H ko:K00796 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_01461 0.0 murF 6.3.2.10 - M ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PAMMCEDC_01462 0.0 - - - S - - - COG NOG19133 non supervised orthologous group
PAMMCEDC_01463 0.0 - - - O - - - protein conserved in bacteria
PAMMCEDC_01464 5.41e-253 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_01465 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_01466 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01467 0.0 - - - GM ko:K21572 - ko00000,ko02000 non supervised orthologous group
PAMMCEDC_01468 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01469 0.0 - - - K ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_01470 0.0 - - - G - - - Glycosyl hydrolases family 43
PAMMCEDC_01471 3.49e-298 - - - G - - - Glycosyl hydrolases family 43
PAMMCEDC_01472 6.34e-259 - - - M - - - Belongs to the glycosyl hydrolase 43 family
PAMMCEDC_01473 0.0 - - - F ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_01474 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01475 0.0 uvrD2 - - L - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_01476 2.67e-130 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor, Bacteroides expansion family 1
PAMMCEDC_01477 2.38e-224 - - - PT - - - COG3712 Fe2 -dicitrate sensor, membrane component
PAMMCEDC_01478 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01479 0.0 - - - S ko:K21572 - ko00000,ko02000 Pfam:SusD
PAMMCEDC_01480 0.0 - 3.2.1.45 GH30 G ko:K01201 ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 30 family
PAMMCEDC_01481 0.0 - - - G - - - hydrolase, family 43
PAMMCEDC_01482 0.0 - - - G - - - Carbohydrate binding domain protein
PAMMCEDC_01483 0.0 - 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 35 family
PAMMCEDC_01484 0.0 - - - KT - - - Y_Y_Y domain
PAMMCEDC_01485 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01486 0.0 - - - M ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_01487 0.0 - - - D ko:K09955 - ko00000 protein conserved in bacteria
PAMMCEDC_01489 4.96e-290 sbcD - - L ko:K03547 - ko00000,ko03400 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PAMMCEDC_01490 0.0 sbcC - - L ko:K03546 - ko00000,ko03400 COG0419 ATPase involved in DNA repair
PAMMCEDC_01492 1.17e-46 - - - S - - - Winged helix-turn-helix domain (DUF2582)
PAMMCEDC_01493 4.14e-55 - - - - - - - -
PAMMCEDC_01494 1.59e-109 - - - - - - - -
PAMMCEDC_01495 0.0 - - - NU - - - Lipid A 3-O-deacylase (PagL)
PAMMCEDC_01496 2.35e-210 nadK 2.7.1.23 - H ko:K00858 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PAMMCEDC_01497 5.05e-172 pdxJ 2.6.99.2 - H ko:K03474 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
PAMMCEDC_01498 1.23e-163 exbB - - U ko:K03561 - ko00000,ko02000 MotA TolQ ExbB proton channel family
PAMMCEDC_01499 6.91e-92 - - - U ko:K03559 - ko00000,ko02000 Transport energizing protein, ExbD TolR family
PAMMCEDC_01500 1.09e-139 - - - M - - - TonB family domain protein
PAMMCEDC_01501 1.88e-124 thiJ 3.5.1.124 - S ko:K03152 - ko00000,ko01000,ko01002 DJ-1 family
PAMMCEDC_01502 2.82e-155 ispD 2.7.7.60 - I ko:K00991 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
PAMMCEDC_01503 0.0 recG 3.6.4.12 - L ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PAMMCEDC_01504 1.7e-106 ndk 2.7.4.6 - F ko:K00940 ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016 ko00000,ko00001,ko00002,ko01000,ko04131 Nucleoside diphosphate kinase
PAMMCEDC_01505 2.35e-210 mepM_1 - - M - - - Peptidase, M23
PAMMCEDC_01506 5.23e-125 - - - S - - - COG NOG27206 non supervised orthologous group
PAMMCEDC_01507 0.0 doxX - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_01508 7.41e-176 tpiA 5.3.1.1 - G ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PAMMCEDC_01509 2.72e-102 - - - S - - - Sporulation and cell division repeat protein
PAMMCEDC_01510 1.79e-138 folE 3.5.4.16 - F ko:K01495 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 GTP cyclohydrolase I
PAMMCEDC_01511 0.0 dnaG - - L ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PAMMCEDC_01512 4.56e-243 mdh 1.1.1.37 - C ko:K00024 ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the LDH MDH superfamily
PAMMCEDC_01513 1.55e-61 - - - K - - - Winged helix DNA-binding domain
PAMMCEDC_01514 2.97e-136 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_01515 2.49e-56 - - - S - - - 2TM domain
PAMMCEDC_01517 3.74e-187 - - - S ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_01518 1.08e-122 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_01519 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01520 0.0 - - - M ko:K21572 - ko00000,ko02000 Pfam:SusD
PAMMCEDC_01521 8.23e-107 - - - S - - - Domain of unknown function (DUF4859)
PAMMCEDC_01522 2.73e-40 - - - S - - - Domain of unknown function (DUF4859)
PAMMCEDC_01523 0.0 - 3.2.1.20 GH31 M ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 COG NOG06228 non supervised orthologous group
PAMMCEDC_01524 0.0 - - - G - - - Concanavalin A-like lectin/glucanases superfamily
PAMMCEDC_01525 0.0 - - - S ko:K09955 - ko00000 protein conserved in bacteria
PAMMCEDC_01526 0.0 - - - E - - - Peptidase, S9A B C family, catalytic domain protein
PAMMCEDC_01528 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01529 0.0 - - - GM ko:K21572 - ko00000,ko02000 COG NOG31573 non supervised orthologous group
PAMMCEDC_01530 0.0 - - - - - - - -
PAMMCEDC_01531 0.0 pelA 3.1.1.11 - G ko:K01051 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 pectate lyase
PAMMCEDC_01532 0.0 - - - G - - - Protein of unknown function (DUF1593)
PAMMCEDC_01533 0.0 nadB 1.4.3.16 - H ko:K00278 ko00250,ko00760,ko01100,map00250,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of L-aspartate to iminoaspartate
PAMMCEDC_01534 9.24e-122 - - - S - - - ORF6N domain
PAMMCEDC_01535 1.2e-86 - - - S - - - COG NOG29403 non supervised orthologous group
PAMMCEDC_01536 8.45e-92 - - - S - - - Bacterial PH domain
PAMMCEDC_01537 0.0 lpdA 1.8.1.4 - C ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3)
PAMMCEDC_01538 0.0 dacB 3.4.16.4 - M ko:K07259 ko00550,map00550 ko00000,ko00001,ko01000,ko01002,ko01011 COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)
PAMMCEDC_01539 6e-210 kduI 5.3.1.17 - G ko:K01815 ko00040,map00040 ko00000,ko00001,ko01000 Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
PAMMCEDC_01540 1.29e-193 idnO 1.1.1.69 - IQ ko:K00046 - ko00000,ko01000 Oxidoreductase, short chain dehydrogenase reductase family protein
PAMMCEDC_01541 7.06e-294 - 3.1.1.11 - G ko:K01051 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 COG NOG24911 non supervised orthologous group
PAMMCEDC_01542 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01543 0.0 - - - S ko:K21572 - ko00000,ko02000 COG NOG26302 non supervised orthologous group
PAMMCEDC_01544 0.0 - 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 glycosyl hydrolase, family 3
PAMMCEDC_01545 0.0 - - - S - - - protein conserved in bacteria
PAMMCEDC_01546 6.75e-155 pgdA_1 - - G - - - Psort location Cytoplasmic, score
PAMMCEDC_01547 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_01548 3.05e-186 znuC - - P ko:K09817 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PAMMCEDC_01549 6.54e-220 mntA - - P ko:K09815,ko:K11707 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 COG0803 ABC-type metal ion transport system, periplasmic component surface adhesin
PAMMCEDC_01550 3.77e-113 - - - K - - - helix_turn_helix, arabinose operon control protein
PAMMCEDC_01551 0.0 - - - D - - - nuclear chromosome segregation
PAMMCEDC_01552 1.99e-168 mnmC - - S - - - Psort location Cytoplasmic, score
PAMMCEDC_01553 1.57e-107 yqaA - - S - - - Psort location CytoplasmicMembrane, score 9.46
PAMMCEDC_01554 3.95e-194 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_01555 1.36e-305 purD 6.3.4.13 - F ko:K01945 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the GARS family
PAMMCEDC_01556 0.0 pepX2 3.4.14.5 - E ko:K01278 ko04974,map04974 ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 Peptidase, S9A B C family, catalytic domain protein
PAMMCEDC_01557 0.0 rlmL - - L ko:K07444 - ko00000,ko01000 Belongs to the methyltransferase superfamily
PAMMCEDC_01559 1.92e-38 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_01560 3.93e-220 oxyR - - K ko:K04761 ko02026,map02026 ko00000,ko00001,ko03000 Psort location Cytoplasmic, score 9.97
PAMMCEDC_01561 3.4e-108 dps - - P ko:K04047 - ko00000,ko03036 Belongs to the Dps family
PAMMCEDC_01562 7.34e-54 - - - T - - - protein histidine kinase activity
PAMMCEDC_01563 6.34e-24 - - - T - - - histidine kinase DNA gyrase B
PAMMCEDC_01564 3e-221 cysE 2.3.1.30 - E ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 9.97
PAMMCEDC_01565 2.23e-14 - - - - - - - -
PAMMCEDC_01566 0.0 rnr - - J ko:K12573,ko:K12585 ko03018,map03018 ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PAMMCEDC_01567 3.92e-218 fieF - - P - - - Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PAMMCEDC_01568 9.48e-264 dfrA 1.1.1.219 - M ko:K00091 - ko00000,ko01000 NAD(P)H-binding
PAMMCEDC_01569 8.07e-233 - - - I - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_01570 3.27e-121 - - - S - - - Putative auto-transporter adhesin, head GIN domain
PAMMCEDC_01571 7.86e-242 dus - - H - - - Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PAMMCEDC_01572 2.52e-300 prtC - - O ko:K08303 ko05120,map05120 ko00000,ko00001,ko01000,ko01002 Psort location Cytoplasmic, score 8.96
PAMMCEDC_01573 0.0 - - - J ko:K21572 - ko00000,ko02000 COG NOG25454 non supervised orthologous group
PAMMCEDC_01574 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01575 0.0 argS 6.1.1.19 - J ko:K01887 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Psort location Cytoplasmic, score
PAMMCEDC_01576 2.08e-156 rnhA 3.1.26.4 - C ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 double-stranded RNA RNA-DNA hybrid binding protein
PAMMCEDC_01577 0.0 ltaS2 - - M - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_01578 0.0 arnT - - M - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_01579 1.78e-71 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PAMMCEDC_01580 1.77e-228 - - GT2 M ko:K20534 - ko00000,ko01000,ko01005,ko02000 Glycosyltransferase, group 2 family protein
PAMMCEDC_01581 0.0 - - - M - - - COG1368 Phosphoglycerol transferase and related
PAMMCEDC_01582 7.85e-241 - - - M - - - Glycosyl transferase family 2
PAMMCEDC_01584 0.0 msbA - - V ko:K11085 ko02010,map02010 ko00000,ko00001,ko01000,ko02000 COG1132 ABC-type multidrug transport system, ATPase and permease components
PAMMCEDC_01585 8.38e-232 - - - S - - - Glycosyl transferase family 2
PAMMCEDC_01586 1.35e-283 - - - M - - - Glycosyl transferases group 1
PAMMCEDC_01587 1.23e-222 - - - S - - - Core-2/I-Branching enzyme
PAMMCEDC_01588 2.48e-225 - - - M - - - Glycosyltransferase family 92
PAMMCEDC_01589 8.64e-224 - - - S - - - Glycosyl transferase family group 2
PAMMCEDC_01590 4.17e-186 - - - T - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_01591 8.1e-178 - - - S - - - Glycosyl transferase, family 2
PAMMCEDC_01592 2.3e-281 glf 5.4.99.9 - M ko:K01854 ko00052,ko00520,map00052,map00520 ko00000,ko00001,ko01000 UDP-galactopyranose mutase
PAMMCEDC_01593 2.7e-231 waaM 2.3.1.241 - M ko:K02517 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase
PAMMCEDC_01594 8.28e-251 - - GT9 M ko:K02843 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 Glycosyltransferase family 9
PAMMCEDC_01595 3.01e-252 pdxB 1.1.1.290 - H ko:K03473 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate
PAMMCEDC_01597 1.19e-232 - - - S - - - Domain of unknown function (DUF4249)
PAMMCEDC_01598 0.0 - - - P - - - TonB-dependent receptor
PAMMCEDC_01599 5.05e-191 - - - PT - - - COG COG3712 Fe2 -dicitrate sensor, membrane component
PAMMCEDC_01600 1.85e-115 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor, ECF subfamily K00960
PAMMCEDC_01601 0.0 - - - - - - - -
PAMMCEDC_01602 6.92e-235 - - - S - - - Fimbrillin-like
PAMMCEDC_01603 7.87e-302 - - - S - - - Fimbrillin-like
PAMMCEDC_01604 2.89e-222 - - - S - - - Domain of unknown function (DUF5119)
PAMMCEDC_01605 4.79e-220 - - - M - - - Protein of unknown function (DUF3575)
PAMMCEDC_01606 0.0 - - - S - - - Susd and RagB outer membrane lipoprotein
PAMMCEDC_01607 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01608 5.41e-123 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PAMMCEDC_01609 4.58e-134 purN 2.1.2.2 - F ko:K11175 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PAMMCEDC_01610 1.5e-44 acpP - - IQ ko:K02078 - ko00000,ko00001 Carrier of the growing fatty acid chain in fatty acid biosynthesis
PAMMCEDC_01611 1.21e-303 fabF 2.3.1.179 - I ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PAMMCEDC_01612 2.34e-212 rnc 3.1.26.3 - J ko:K03685 ko03008,ko05205,map03008,map05205 ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PAMMCEDC_01613 0.0 - - - P - - - COG COG3119 Arylsulfatase A and related enzymes
PAMMCEDC_01614 0.0 - - - G - - - Raffinose synthase or seed imbibition protein Sip1
PAMMCEDC_01615 1.02e-93 - - - G - - - Raffinose synthase or seed imbibition protein Sip1
PAMMCEDC_01616 0.0 - - - G - - - Alpha-L-fucosidase
PAMMCEDC_01617 0.0 - - - P - - - COG COG3119 Arylsulfatase A and related enzymes
PAMMCEDC_01618 1.71e-180 - - - M - - - Carbohydrate esterase, sialic acid-specific acetylesterase
PAMMCEDC_01619 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_01620 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01621 0.0 - - - T - - - cheY-homologous receiver domain
PAMMCEDC_01622 4.06e-243 pfkA 2.7.1.11, 2.7.1.90 - F ko:K21071 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PAMMCEDC_01623 0.0 - - - H - - - GH3 auxin-responsive promoter
PAMMCEDC_01624 0.0 - - - S - - - COG NOG07965 non supervised orthologous group
PAMMCEDC_01625 5.49e-196 - - - S - - - Protein of unknown function (DUF3108)
PAMMCEDC_01626 6.33e-188 - - - - - - - -
PAMMCEDC_01627 0.0 - - - T - - - PAS domain
PAMMCEDC_01628 2.87e-132 - - - - - - - -
PAMMCEDC_01629 0.0 paaK 6.2.1.30 - H ko:K01912 ko00360,ko01120,ko05111,map00360,map01120,map05111 ko00000,ko00001,ko01000 AMP-binding enzyme
PAMMCEDC_01630 0.0 - - - M - - - Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase
PAMMCEDC_01631 0.0 crtI - - Q - - - Flavin containing amine oxidoreductase
PAMMCEDC_01632 0.0 - - - I ko:K07003 - ko00000 Phosphate acyltransferases
PAMMCEDC_01633 9.63e-291 - - - M - - - Uncharacterized protein conserved in bacteria (DUF2062)
PAMMCEDC_01634 4.99e-296 - - - S - - - Domain of unknown function (DUF4221)
PAMMCEDC_01635 4.83e-64 - - - - - - - -
PAMMCEDC_01636 1.24e-158 - - - S - - - Protein of unknown function (DUF1573)
PAMMCEDC_01638 1.89e-87 fabZ 4.2.1.59 - I ko:K02372 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 FabA-like domain
PAMMCEDC_01639 1.44e-122 - - - - - - - -
PAMMCEDC_01640 6.61e-141 - - - M - - - Outer membrane lipoprotein carrier protein LolA
PAMMCEDC_01641 1.19e-166 pgdA 3.5.1.104 - G ko:K22278 - ko00000,ko01000 Polysaccharide deacetylase
PAMMCEDC_01642 5.54e-208 - - - S - - - KilA-N domain
PAMMCEDC_01643 5.42e-227 - - - IQ - - - Beta-ketoacyl synthase, N-terminal domain
PAMMCEDC_01644 3.73e-283 fabF2 2.3.1.41 - IQ ko:K00647 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Belongs to the beta-ketoacyl-ACP synthases family
PAMMCEDC_01645 4.77e-51 acpP2 - - IQ ko:K02078 - ko00000,ko00001 Phosphopantetheine attachment site
PAMMCEDC_01646 0.0 fabF2 2.3.1.41 - IQ ko:K00647 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Belongs to the beta-ketoacyl-ACP synthases family
PAMMCEDC_01647 3.22e-103 - - - S ko:K07107 - ko00000,ko01000 acyl-CoA thioester hydrolase, YbgC YbaW family
PAMMCEDC_01648 1.54e-100 - - - I - - - dehydratase
PAMMCEDC_01649 7.22e-263 crtF - - Q - - - O-methyltransferase
PAMMCEDC_01650 1.22e-216 - - - S - - - Bacterial lipid A biosynthesis acyltransferase
PAMMCEDC_01651 5.87e-51 acpP_2 - - IQ ko:K02078 - ko00000,ko00001 Phosphopantetheine attachment site
PAMMCEDC_01652 8.97e-293 fabB 2.3.1.41 - IQ ko:K00647 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Belongs to the beta-ketoacyl-ACP synthases family
PAMMCEDC_01653 3.27e-170 fabG3 1.1.1.100, 1.1.1.36 - IQ ko:K00023,ko:K00059 ko00061,ko00333,ko00630,ko00650,ko00780,ko01040,ko01100,ko01120,ko01130,ko01200,ko01212,map00061,map00333,map00630,map00650,map00780,map01040,map01100,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Oxidoreductase, short chain dehydrogenase reductase family protein
PAMMCEDC_01654 0.0 hutH 4.3.1.23, 4.3.1.3 - E ko:K01745,ko:K10774 ko00340,ko00350,ko01100,map00340,map00350,map01100 ko00000,ko00001,ko00002,ko01000 Aromatic amino acid lyase
PAMMCEDC_01655 0.0 cysS 6.1.1.16 - J ko:K01883 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
PAMMCEDC_01656 0.0 - 3.2.1.99 GH43 G ko:K06113 - ko00000,ko01000 Glycosyl hydrolases family 43
PAMMCEDC_01657 0.0 - - - - - - - -
PAMMCEDC_01658 0.0 - - - M ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_01659 0.0 - - - P - - - TonB dependent receptor
PAMMCEDC_01660 0.0 - - - G - - - COG NOG26813 non supervised orthologous group
PAMMCEDC_01661 0.0 - - - T - - - adenylate cyclase carring two-component hybrid sensor and regulator domains
PAMMCEDC_01662 0.0 - 3.2.1.99 GH43 G ko:K06113 - ko00000,ko01000 Belongs to the glycosyl hydrolase 43 family
PAMMCEDC_01663 0.0 - 3.2.1.55 GH51 G ko:K01209 ko00520,map00520 ko00000,ko00001,ko01000 Carbohydrate binding domain protein
PAMMCEDC_01664 0.0 arsA - - P - - - COG COG3119 Arylsulfatase A and related enzymes
PAMMCEDC_01665 4.01e-262 mnmA 2.8.1.13 - J ko:K00566 ko04122,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PAMMCEDC_01666 8.76e-202 - - - S - - - COG3943 Virulence protein
PAMMCEDC_01667 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 COG3250 Beta-galactosidase beta-glucuronidase
PAMMCEDC_01668 9.69e-51 hupB - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PAMMCEDC_01669 3.7e-163 - 3.4.21.105 - S ko:K09650 - ko00000,ko01000,ko01002,ko03029 Psort location CytoplasmicMembrane, score
PAMMCEDC_01670 1.93e-210 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_01671 3.42e-258 - - - L - - - Endonuclease Exonuclease phosphatase family
PAMMCEDC_01672 0.0 dcp 3.4.15.5 - E ko:K01284 - ko00000,ko01000,ko01002 Peptidase family M3
PAMMCEDC_01673 0.0 secD - - U ko:K03072,ko:K12257 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
PAMMCEDC_01674 3.29e-258 - 2.7.1.45 - G ko:K00874 ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Kinase, PfkB family
PAMMCEDC_01675 2.23e-235 ltd - - M - - - NAD dependent epimerase dehydratase family
PAMMCEDC_01676 1.36e-285 kbl 2.3.1.29 - H ko:K00639 ko00260,map00260 ko00000,ko00001,ko01000,ko01007 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA
PAMMCEDC_01678 0.0 porA 1.2.7.11, 1.2.7.3 - C ko:K00174 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 2-oxoacid acceptor oxidoreductase, alpha subunit
PAMMCEDC_01679 2.47e-252 oorB 1.2.7.11, 1.2.7.3 - C ko:K00175 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin
PAMMCEDC_01680 9.82e-156 upp 2.4.2.9 - F ko:K00761 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 uracil phosphoribosyltransferase
PAMMCEDC_01681 9.28e-58 groS - - O ko:K04078 - ko00000,ko03029,ko03110 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PAMMCEDC_01682 0.0 - - - C - - - 4Fe-4S binding domain protein
PAMMCEDC_01683 5.22e-255 hydE 2.8.1.6 - C ko:K01012 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko00002,ko01000 Iron-only hydrogenase maturation rSAM protein HydE
PAMMCEDC_01684 0.0 hydG 4.1.99.19 - C ko:K03150 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 Iron-only hydrogenase maturation rSAM protein HydG
PAMMCEDC_01685 3.19e-284 hydF - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_01686 1.13e-54 cas2 - - L ko:K09951 - ko00000,ko02048 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PAMMCEDC_01687 2.32e-235 cas1 - - L ko:K15342 - ko00000,ko02048,ko03400 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PAMMCEDC_01688 6.39e-160 cas4 3.1.12.1 - L ko:K07464 - ko00000,ko01000,ko02048 CRISPR-associated protein Cas4
PAMMCEDC_01689 3.76e-185 - - - L ko:K19115,ko:K19118 - ko00000,ko02048 CRISPR-associated protein Cas7
PAMMCEDC_01690 0.0 csd1 - - S ko:K19117 - ko00000,ko02048 CRISPR-associated protein (Cas_Csd1)
PAMMCEDC_01691 2.31e-144 cas5d - - S ko:K19119 - ko00000,ko02048 CRISPR-associated protein (Cas_Cas5)
PAMMCEDC_01692 3.35e-157 - - - O - - - BRO family, N-terminal domain
PAMMCEDC_01693 0.0 - - - L ko:K07012 - ko00000,ko01000,ko02048 CRISPR-associated endonuclease Cas3-HD
PAMMCEDC_01694 0.0 hisS 6.1.1.21 - J ko:K01892 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Psort location Cytoplasmic, score
PAMMCEDC_01695 3.25e-185 - - - G ko:K10439,ko:K17213 ko02010,ko02030,map02010,map02030 ko00000,ko00001,ko00002,ko02000 Periplasmic binding protein domain
PAMMCEDC_01696 4.47e-232 - - - G ko:K05340 - ko00000,ko02000 COG NOG04879 non supervised orthologous group
PAMMCEDC_01697 0.0 - - - G - - - L-fucose isomerase, C-terminal domain
PAMMCEDC_01698 0.0 glpK 2.7.1.30 - F ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 ko00000,ko00001,ko01000,ko04147 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PAMMCEDC_01699 5.6e-222 - 2.2.1.1 - G ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Transketolase, pyrimidine binding domain
PAMMCEDC_01700 7.82e-202 - 2.2.1.1 - G ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 XFP N-terminal domain
PAMMCEDC_01701 3.1e-168 - - - K ko:K02081 - ko00000,ko03000 DeoR C terminal sensor domain
PAMMCEDC_01702 4.03e-143 ribB 3.5.4.25, 4.1.99.12 - H ko:K14652 ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PAMMCEDC_01703 0.0 - - - S - - - Domain of unknown function (DUF5060)
PAMMCEDC_01704 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_01705 0.0 - - - E ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_01706 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01707 8.48e-241 - - - PT - - - Domain of unknown function (DUF4974)
PAMMCEDC_01708 1.4e-132 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PAMMCEDC_01709 0.0 - - - G - - - Glycosyl hydrolase family 63 C-terminal domain
PAMMCEDC_01710 7.67e-152 - - - S ko:K06973 - ko00000 neutral zinc metallopeptidase
PAMMCEDC_01711 8.86e-213 - - - K - - - Helix-turn-helix domain
PAMMCEDC_01712 1.01e-224 - - - JM - - - COG NOG09722 non supervised orthologous group
PAMMCEDC_01713 0.0 - - - M - - - Outer membrane protein, OMP85 family
PAMMCEDC_01714 0.0 - - - S - - - Psort location OuterMembrane, score 9.49
PAMMCEDC_01716 1.2e-203 - 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 protein contains double-stranded beta-helix domain
PAMMCEDC_01717 6.08e-97 - - - S - - - Domain of unknown function (DUF1893)
PAMMCEDC_01718 0.0 - - - H ko:K02014 - ko00000,ko02000 COG COG4771 Outer membrane receptor for ferrienterochelin and colicins
PAMMCEDC_01719 2.81e-233 - - - C ko:K07138 - ko00000 Fe-S center protein
PAMMCEDC_01720 1.07e-199 - 5.2.1.8 - M ko:K01802,ko:K03768 - ko00000,ko01000,ko03110 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PAMMCEDC_01721 1.47e-305 - - - S ko:K07263 - ko00000,ko01000,ko01002 Peptidase M16 inactive domain protein
PAMMCEDC_01722 3.77e-312 norM - - V ko:K03327 - ko00000,ko02000 MATE efflux family protein
PAMMCEDC_01723 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_01724 0.0 - - - T ko:K07713 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains
PAMMCEDC_01725 2.14e-59 - - - S - - - COG NOG30576 non supervised orthologous group
PAMMCEDC_01726 2.23e-163 rluC 5.4.99.23, 5.4.99.28, 5.4.99.29 - J ko:K06177,ko:K06180 - ko00000,ko01000,ko03009,ko03016 ribosomal pseudouridine synthase C, large subunit
PAMMCEDC_01727 8.6e-169 fabG 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 with different specificities (related to short-chain alcohol
PAMMCEDC_01728 1.47e-138 qacR - - K - - - transcriptional regulator, TetR family
PAMMCEDC_01730 0.0 lacZ_17 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PAMMCEDC_01731 0.0 - - - S - - - Protein of unknown function (DUF1566)
PAMMCEDC_01732 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_01733 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01734 1.8e-307 rhlE 3.6.4.13 - JKL ko:K11927 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Belongs to the DEAD box helicase family
PAMMCEDC_01735 0.0 - - - S - - - PQQ enzyme repeat protein
PAMMCEDC_01736 1.24e-234 - - - L - - - Endonuclease/Exonuclease/phosphatase family
PAMMCEDC_01737 2.03e-221 cysK 2.5.1.47 - E ko:K01738,ko:K12339 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the cysteine synthase cystathionine beta- synthase family
PAMMCEDC_01738 1.21e-269 trmU 2.8.1.13 - J ko:K00566 ko04122,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PAMMCEDC_01739 1.39e-144 narL - - K - - - COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PAMMCEDC_01741 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01742 0.0 - - - F ko:K21572 - ko00000,ko02000 Pfam:SusD
PAMMCEDC_01743 0.0 - - - JM - - - N-acetylglucosamine-1-phosphate uridyltransferase
PAMMCEDC_01744 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_01745 2.87e-137 rbr - - C - - - Rubrerythrin
PAMMCEDC_01746 5.19e-59 - - - S - - - Domain of unknown function (DUF4884)
PAMMCEDC_01747 0.0 sulP - - P ko:K03321 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_01748 7.64e-291 - - - MU ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 Outer membrane efflux protein
PAMMCEDC_01749 0.0 lagD - - V ko:K20344 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko02000 Papain-like cysteine protease AvrRpt2
PAMMCEDC_01750 1.44e-276 - - - M ko:K20345 ko02024,map02024 ko00000,ko00001,ko02000 HlyD family secretion protein
PAMMCEDC_01752 6.4e-195 - - - S - - - COG NOG37815 non supervised orthologous group
PAMMCEDC_01753 4.55e-83 - - - - - - - -
PAMMCEDC_01756 3.45e-37 - - - - - - - -
PAMMCEDC_01757 1.1e-24 - - - - - - - -
PAMMCEDC_01758 1.71e-49 - - - - - - - -
PAMMCEDC_01760 1.71e-14 - - - - - - - -
PAMMCEDC_01764 2.66e-306 - 2.7.13.3 - T ko:K07636 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_01765 3.28e-165 - - - K - - - COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PAMMCEDC_01766 6.17e-192 - - - C - - - radical SAM domain protein
PAMMCEDC_01767 0.0 - - - L - - - Psort location OuterMembrane, score
PAMMCEDC_01768 3.86e-112 - - - S - - - COG NOG14459 non supervised orthologous group
PAMMCEDC_01769 9.06e-125 spoU - - J - - - RNA methylase, SpoU family K00599
PAMMCEDC_01770 4.33e-235 nadA 2.5.1.72 - H ko:K03517 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
PAMMCEDC_01772 4.75e-132 rdgB 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PAMMCEDC_01773 9.41e-124 - - - J - - - COG COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
PAMMCEDC_01774 2.43e-209 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_01775 0.0 leuS 6.1.1.4 - J ko:K01869 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Belongs to the class-I aminoacyl-tRNA synthetase family
PAMMCEDC_01776 0.0 - - - T - - - cheY-homologous receiver domain
PAMMCEDC_01777 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PAMMCEDC_01778 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01779 0.0 - - - F ko:K21572 - ko00000,ko02000 Pfam:SusD
PAMMCEDC_01780 0.0 - - - M ko:K08676 - ko00000,ko01000,ko01002 Tricorn protease homolog
PAMMCEDC_01781 1.26e-137 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PAMMCEDC_01782 4.54e-240 - - - PT - - - Domain of unknown function (DUF4974)
PAMMCEDC_01783 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01784 0.0 - - - E ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_01785 0.0 - - - P - - - Type I phosphodiesterase / nucleotide pyrophosphatase
PAMMCEDC_01786 0.0 - 3.1.6.1 - P ko:K01130 ko00140,ko00600,map00140,map00600 ko00000,ko00001,ko01000 Arylsulfatase
PAMMCEDC_01787 0.0 - - - S - - - COG COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PAMMCEDC_01788 0.0 - 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Glycosyl hydrolase family 3 C-terminal domain protein
PAMMCEDC_01789 0.0 scpC 2.8.3.18, 3.1.2.1 - C ko:K01067,ko:K18118 ko00020,ko00620,ko00650,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00650,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 COG0427 Acetyl-CoA hydrolase
PAMMCEDC_01790 8.74e-66 - - - - - - - -
PAMMCEDC_01791 0.0 miaB 2.8.4.3 - J ko:K06168 - ko00000,ko01000,ko03016 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PAMMCEDC_01792 2.76e-95 mip 5.2.1.8 - O ko:K01802 - ko00000,ko01000 COG COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1
PAMMCEDC_01793 1.64e-218 - - - H - - - Methyltransferase domain protein
PAMMCEDC_01794 6.79e-191 ftsX - - D ko:K09811 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03036 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily
PAMMCEDC_01795 7.5e-53 fjo13 - - S - - - COG NOG19122 non supervised orthologous group
PAMMCEDC_01796 9.72e-184 uppP 3.6.1.27 - V ko:K06153 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PAMMCEDC_01797 1.29e-168 truB 5.4.99.25 - J ko:K03177 - ko00000,ko01000,ko03016 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PAMMCEDC_01798 1.5e-257 queA 2.4.99.17 - H ko:K07568 - ko00000,ko01000,ko03016 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PAMMCEDC_01799 1.42e-102 folK 2.7.6.3 - H ko:K00950 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase
PAMMCEDC_01802 6.35e-62 - - - S - - - Thiol-activated cytolysin
PAMMCEDC_01803 2.6e-198 - - - S - - - Thiol-activated cytolysin
PAMMCEDC_01804 7.62e-132 - - - - - - - -
PAMMCEDC_01805 3.77e-81 - - - S - - - Domain of unknown function (DUF3244)
PAMMCEDC_01806 0.0 - - - S - - - Tetratricopeptide repeat
PAMMCEDC_01807 2.84e-288 - - - S - - - Acyltransferase family
PAMMCEDC_01808 7.73e-176 - - - S - - - phosphatase family
PAMMCEDC_01809 0.0 - - - EGP ko:K08169 - ko00000,ko02000 the major facilitator superfamily
PAMMCEDC_01810 2.18e-306 metK 2.5.1.6 - H ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PAMMCEDC_01811 9.96e-135 yvdD 3.2.2.10 - S ko:K06966 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the LOG family
PAMMCEDC_01812 1.63e-193 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_01813 6.62e-178 hemD 4.2.1.75 - H ko:K01719 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000 Uroporphyrinogen-III synthase
PAMMCEDC_01814 7.1e-83 rnpA 3.1.26.5 - J ko:K03536 - ko00000,ko01000,ko03016 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PAMMCEDC_01815 5.8e-51 yidD - - S ko:K08998 - ko00000 Could be involved in insertion of integral membrane proteins into the membrane
PAMMCEDC_01816 4.9e-151 - - - L ko:K03424 - ko00000,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_01817 2.9e-316 tyrS 6.1.1.1 - J ko:K01866 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PAMMCEDC_01818 0.0 - - - M ko:K08676 - ko00000,ko01000,ko01002 Tricorn protease homolog
PAMMCEDC_01821 3.78e-148 - - - M - - - Protein of unknown function (DUF3575)
PAMMCEDC_01822 0.0 - - - M - - - COG NOG23378 non supervised orthologous group
PAMMCEDC_01823 0.0 - - - S - - - Major fimbrial subunit protein type IV, Fimbrillin, C-terminal
PAMMCEDC_01824 4.59e-237 - - - S - - - COG NOG32009 non supervised orthologous group
PAMMCEDC_01825 1.52e-303 - - - - - - - -
PAMMCEDC_01826 0.0 - - - - - - - -
PAMMCEDC_01827 5.77e-123 - - - S - - - COG COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
PAMMCEDC_01828 0.0 mutS - - L ko:K03555 ko03430,map03430 ko00000,ko00001,ko03400 that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PAMMCEDC_01829 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain protein
PAMMCEDC_01831 4.96e-144 - - - M - - - Outer membrane protein beta-barrel domain
PAMMCEDC_01832 0.0 - - - NU - - - Type IV pilus biogenesis stability protein PilW
PAMMCEDC_01833 1.84e-89 - - - NU - - - Type IV pilus biogenesis stability protein PilW
PAMMCEDC_01834 2.93e-138 - - - NU - - - Type IV pilus biogenesis stability protein PilW
PAMMCEDC_01835 3.69e-34 - - - - - - - -
PAMMCEDC_01836 1.98e-166 - - - M - - - Outer membrane protein beta-barrel domain
PAMMCEDC_01837 9.86e-160 - 2.3.1.28 - V ko:K19271 - br01600,ko00000,ko01000,ko01504 COG4845 Chloramphenicol O-acetyltransferase
PAMMCEDC_01838 2.17e-204 lgt - - M - - - Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PAMMCEDC_01839 2.19e-219 panE 1.1.1.169 - H ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PAMMCEDC_01840 5.47e-259 ychF - - J ko:K06942 - ko00000,ko03009 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PAMMCEDC_01841 1.14e-87 - - - S - - - COG NOG29882 non supervised orthologous group
PAMMCEDC_01843 0.0 polA 2.7.7.7 - L ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 ko00000,ko00001,ko01000,ko03032,ko03400 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PAMMCEDC_01844 4.96e-222 ispB 2.5.1.90 - H ko:K02523 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Belongs to the FPP GGPP synthase family
PAMMCEDC_01845 1.66e-220 deoC 4.1.2.4 - H ko:K01619 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PAMMCEDC_01846 1.85e-69 ypjD - - S - - - MazG nucleotide pyrophosphohydrolase domain
PAMMCEDC_01847 2.44e-104 dtd - - J ko:K07560 - ko00000,ko01000,ko03016 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PAMMCEDC_01848 0.0 uvrC - - L ko:K03703 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PAMMCEDC_01849 2.51e-120 apt 2.4.2.7 - F ko:K00759 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000,ko04147 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PAMMCEDC_01850 0.0 gidA - - D ko:K03495 - ko00000,ko03016,ko03036 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PAMMCEDC_01851 9.65e-246 yqiK - - S ko:K07192 ko04910,map04910 ko00000,ko00001,ko03036,ko04131,ko04147 SPFH Band 7 PHB domain protein
PAMMCEDC_01852 3.56e-126 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PAMMCEDC_01853 1.24e-98 ybeY - - S - - - Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PAMMCEDC_01854 2e-284 czcC - - MU ko:K15725 - ko00000,ko02000 Outer membrane efflux protein
PAMMCEDC_01855 4.3e-255 czcB - - M ko:K15727 - ko00000,ko02000 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMMCEDC_01856 0.0 czcA_1 - - P ko:K15726 - ko00000,ko02000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMMCEDC_01857 1.1e-159 cusR - - T ko:K07665 ko02020,map02020 ko00000,ko00001,ko00002,ko01504,ko02022 Transcriptional regulatory protein, C terminal
PAMMCEDC_01858 1.02e-312 arlS_2 - - T - - - histidine kinase DNA gyrase B
PAMMCEDC_01859 2.89e-284 spmA - - S ko:K06373 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_01860 8.06e-115 dinD - - S ko:K14623 - ko00000,ko03400 DNA-damage-inducible protein D
PAMMCEDC_01861 5.94e-172 - - - S - - - L,D-transpeptidase catalytic domain
PAMMCEDC_01862 2.2e-253 - - - S - - - COG NOG25022 non supervised orthologous group
PAMMCEDC_01863 3.11e-219 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_01864 1.42e-112 - - - K - - - helix_turn_helix, arabinose operon control protein
PAMMCEDC_01865 0.0 - - - N - - - nuclear chromosome segregation
PAMMCEDC_01866 1.58e-122 - - - - - - - -
PAMMCEDC_01867 5.91e-180 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_01868 7.77e-198 - - - KT - - - COG COG3279 Response regulator of the LytR AlgR family
PAMMCEDC_01869 0.0 - - - M - - - Psort location OuterMembrane, score
PAMMCEDC_01870 6.23e-245 - 3.1.3.2 - S ko:K14379 ko00740,ko01100,ko04142,ko04380,ko05323,map00740,map01100,map04142,map04380,map05323 ko00000,ko00001,ko01000 Calcineurin-like phosphoesterase
PAMMCEDC_01871 1.85e-215 yrbG - - P ko:K07301 - ko00000,ko02000 K -dependent Na Ca exchanger
PAMMCEDC_01872 2.69e-276 yghO - - K - - - COG NOG07967 non supervised orthologous group
PAMMCEDC_01873 0.0 parE - - L ko:K02622 - ko00000,ko01000,ko02048,ko03032,ko03036 COG0187 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit
PAMMCEDC_01874 2.11e-105 coaD 2.7.7.3 - H ko:K00954 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PAMMCEDC_01875 0.0 ctpA 3.4.21.102 - M ko:K03797 - ko00000,ko01000,ko01002 Belongs to the peptidase S41A family
PAMMCEDC_01876 5.24e-143 - 3.6.1.27 - I ko:K19302 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 PAP2 superfamily
PAMMCEDC_01877 4.86e-165 sdhC - - C ko:K00241 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002 Succinate dehydrogenase cytochrome B subunit, b558 family
PAMMCEDC_01878 0.0 sdhA 1.3.5.1, 1.3.5.4 - C ko:K00239 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134 ko00000,ko00001,ko00002,ko01000 COG1053 Succinate dehydrogenase fumarate reductase flavoprotein subunit
PAMMCEDC_01879 7.48e-185 frdB 1.3.5.1, 1.3.5.4 - C ko:K00240 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 COG0479 Succinate dehydrogenase fumarate reductase Fe-S protein subunit
PAMMCEDC_01880 3.1e-208 - - - K - - - Transcriptional regulator, AraC family
PAMMCEDC_01881 2.51e-27 - - - H - - - COG NOG08812 non supervised orthologous group
PAMMCEDC_01882 5e-80 - - - H - - - COG NOG08812 non supervised orthologous group
PAMMCEDC_01884 3.84e-233 - - - S - - - Fimbrillin-like
PAMMCEDC_01885 4.02e-237 - - - S - - - COG NOG26135 non supervised orthologous group
PAMMCEDC_01886 5.86e-310 - - - M - - - COG NOG24980 non supervised orthologous group
PAMMCEDC_01888 0.0 - 3.2.1.51 GH29 G ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 F5 8 type C domain protein
PAMMCEDC_01889 2.17e-267 dprA - - LU ko:K04096 - ko00000 Rossmann fold nucleotide-binding protein involved in DNA uptake
PAMMCEDC_01890 3.75e-94 - - - S ko:K07107 - ko00000,ko01000 acyl-CoA thioester hydrolase, YbgC YbaW family
PAMMCEDC_01891 4.12e-225 dus - - H - - - Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PAMMCEDC_01892 3.48e-315 - - - S - - - P-loop ATPase and inactivated derivatives
PAMMCEDC_01893 3.1e-269 fucO 1.1.1.77 - C ko:K00048 ko00630,ko00640,ko01120,map00630,map00640,map01120 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PAMMCEDC_01894 0.0 - - - P - - - Carboxypeptidase regulatory-like domain
PAMMCEDC_01895 9.73e-180 - 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 glycerophosphoryl diester phosphodiesterase
PAMMCEDC_01896 6.34e-147 - - - - - - - -
PAMMCEDC_01897 0.0 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_01898 1.98e-180 dapB 1.17.1.8 - E ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the DapB family
PAMMCEDC_01899 0.0 lepB 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 signal peptidase i
PAMMCEDC_01900 1.76e-213 lepB_1 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
PAMMCEDC_01901 2.73e-166 - - - C - - - WbqC-like protein
PAMMCEDC_01902 5.02e-188 uxuB - - IQ - - - Oxidoreductase, short chain dehydrogenase reductase family protein
PAMMCEDC_01903 5.16e-292 uxuA 4.2.1.8 - H ko:K01686 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the dehydration of D-mannonate
PAMMCEDC_01904 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01905 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_01906 0.0 - - - P - - - COG COG3119 Arylsulfatase A and related enzymes
PAMMCEDC_01907 0.0 - - - T - - - Two component regulator propeller
PAMMCEDC_01908 0.0 - 3.2.1.51 GH95 G ko:K15923 ko00511,map00511 ko00000,ko00001,ko01000 COG NOG04001 non supervised orthologous group
PAMMCEDC_01909 5.11e-298 - - - S - - - Belongs to the peptidase M16 family
PAMMCEDC_01910 7.75e-126 - 3.2.2.10 - S ko:K06966 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the LOG family
PAMMCEDC_01911 1.58e-138 kdsD 5.3.1.13 - M ko:K06041 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 sugar phosphate isomerase involved in capsule formation
PAMMCEDC_01912 7.7e-226 - 2.7.1.4 - G ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 ko00000,ko00001,ko01000 COG COG0524 Sugar kinases, ribokinase family
PAMMCEDC_01913 1.14e-258 - 3.2.1.14 GH18 G ko:K01183 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 18 family
PAMMCEDC_01914 0.0 pepN 3.4.11.2 - E ko:K01256 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 Peptidase family M1 domain
PAMMCEDC_01915 7.06e-274 mnmA 2.8.1.13 - J ko:K00566 ko04122,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PAMMCEDC_01916 2.5e-187 - - - C - - - 4Fe-4S binding domain
PAMMCEDC_01917 0.0 - - - M - - - Belongs to the glycosyl hydrolase 43 family
PAMMCEDC_01918 5.8e-56 rpmE2 - - J ko:K02909 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L31
PAMMCEDC_01919 6.14e-147 - - - S - - - COG NOG19149 non supervised orthologous group
PAMMCEDC_01920 1.06e-314 paaK 6.2.1.30 - H ko:K01912 ko00360,ko01120,ko05111,map00360,map01120,map05111 ko00000,ko00001,ko01000 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
PAMMCEDC_01921 2.12e-92 - - - S - - - ACT domain protein
PAMMCEDC_01922 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_01923 1.54e-217 ydjH_1 2.7.1.4 - G ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 ko00000,ko00001,ko01000 pfkB family
PAMMCEDC_01924 4.05e-266 - - - G - - - Transporter, major facilitator family protein
PAMMCEDC_01925 0.0 sacC 3.2.1.80 - G ko:K03332 ko00051,map00051 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 32 family
PAMMCEDC_01926 5.14e-246 scrL - - P - - - TonB-dependent receptor
PAMMCEDC_01927 5.1e-306 scrL - - P - - - TonB-dependent receptor
PAMMCEDC_01928 1.25e-141 - - - L - - - DNA-binding protein
PAMMCEDC_01929 7.88e-209 lgt - - M - - - Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PAMMCEDC_01930 1.93e-211 ddh 1.4.1.16 - E ko:K03340 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
PAMMCEDC_01931 8.78e-130 ruvA 3.6.4.12 - L ko:K03550 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PAMMCEDC_01932 1.88e-185 - - - - - - - -
PAMMCEDC_01933 0.0 cca 2.7.7.19, 2.7.7.72 - J ko:K00970,ko:K00974 ko03013,ko03018,map03013,map03018 ko00000,ko00001,ko01000,ko03016,ko03019 tRNA nucleotidyltransferase poly(A) polymerase
PAMMCEDC_01934 1.71e-161 hly-III - - S ko:K11068 - ko00000,ko02042 membrane protein, hemolysin III homolog
PAMMCEDC_01935 0.0 nrdD 1.1.98.6 - FK ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_01936 1.71e-114 nrdG 1.97.1.4 - C ko:K04068 - ko00000,ko01000 Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PAMMCEDC_01937 0.0 rseP - - M ko:K11749 ko02024,ko04112,map02024,map04112 ko00000,ko00001,ko01000,ko01002 zinc metalloprotease
PAMMCEDC_01938 1.32e-269 dxr 1.1.1.267 - I ko:K00099 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
PAMMCEDC_01939 2.51e-200 nlpD_1 - - M - - - Peptidase, M23 family
PAMMCEDC_01940 3.19e-122 rimM - - J ko:K02860 - ko00000,ko03009 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PAMMCEDC_01941 6.85e-312 murA 2.5.1.7 - M ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PAMMCEDC_01942 2.32e-144 - - - S - - - COG NOG11645 non supervised orthologous group
PAMMCEDC_01943 7.77e-167 yeaZ - - O ko:K14742 - ko00000,ko03016 Universal bacterial protein YeaZ
PAMMCEDC_01944 3.04e-203 - - - S - - - stress-induced protein
PAMMCEDC_01945 7.92e-129 gmk 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Essential for recycling GMP and indirectly, cGMP
PAMMCEDC_01946 1.71e-33 - - - - - - - -
PAMMCEDC_01947 7.66e-141 nadD 2.7.7.18 - H ko:K00969 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PAMMCEDC_01948 3.04e-110 - - - S - - - Family of unknown function (DUF3836)
PAMMCEDC_01949 1.41e-203 - - - S ko:K07098 - ko00000 Ser Thr phosphatase family protein
PAMMCEDC_01950 7.9e-214 menA 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the MenA family. Type 1 subfamily
PAMMCEDC_01951 3.52e-111 ispF 4.6.1.12 - H ko:K01770 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
PAMMCEDC_01952 5.74e-148 fahA - - Q - - - 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, fumarylacetoacetate hydrolase family K01828
PAMMCEDC_01953 2.51e-152 rex - - K ko:K01926 - ko00000,ko03000 Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PAMMCEDC_01954 1.51e-71 - - - J ko:K03113 ko03013,map03013 ko00000,ko00001,ko03012 COG0023 Translation initiation factor 1 (eIF-1 SUI1) and related
PAMMCEDC_01955 3.1e-223 tsf - - J ko:K02357 - ko00000,ko03012,ko03029 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PAMMCEDC_01956 4.28e-189 rpsB - - J ko:K02967 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS2 family
PAMMCEDC_01957 7.16e-82 rpsI - - J ko:K02996 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS9 family
PAMMCEDC_01958 4.02e-109 rplM - - J ko:K02871 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PAMMCEDC_01959 2.43e-49 - - - - - - - -
PAMMCEDC_01960 1.27e-135 - - - S - - - Zeta toxin
PAMMCEDC_01961 2.77e-119 - - - S - - - COG NOG27649 non supervised orthologous group
PAMMCEDC_01962 0.0 asnS 6.1.1.22 - J ko:K01893 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Psort location Cytoplasmic, score
PAMMCEDC_01963 6.41e-227 rluB 5.4.99.22 - J ko:K06178 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
PAMMCEDC_01964 0.0 purB 4.3.2.2 - F ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PAMMCEDC_01965 8.4e-295 - - - V - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_01966 0.0 - - - M - - - PA domain
PAMMCEDC_01967 2.88e-80 - - - K - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_01968 4.2e-209 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_01969 1.99e-199 cbiO - - V ko:K01990 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score
PAMMCEDC_01970 0.0 - - - S - - - tetratricopeptide repeat
PAMMCEDC_01971 2.47e-224 - - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 COG0226 ABC-type phosphate transport system, periplasmic component
PAMMCEDC_01972 8.56e-180 tonB2 - - U ko:K03832 - ko00000,ko02000 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PAMMCEDC_01973 4.29e-144 exbD2 - - U - - - Biopolymer transport protein ExbD/TolR
PAMMCEDC_01974 4.7e-136 exbD1 - - U - - - Biopolymer transport protein ExbD/TolR
PAMMCEDC_01975 3.01e-185 exbB - - U ko:K03561 - ko00000,ko02000 MotA TolQ ExbB proton channel family
PAMMCEDC_01976 5.8e-78 - - - - - - - -
PAMMCEDC_01977 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Glycosyl hydrolases family 2, TIM barrel domain
PAMMCEDC_01978 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_01979 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01980 1.56e-229 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PAMMCEDC_01981 8.8e-129 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PAMMCEDC_01982 0.0 - - - S - - - P-loop ATPase and inactivated derivatives
PAMMCEDC_01983 7.44e-159 - - - L - - - DNA-binding protein
PAMMCEDC_01984 1.21e-136 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PAMMCEDC_01985 4.57e-245 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PAMMCEDC_01986 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_01987 0.0 - - - GM ko:K21572 - ko00000,ko02000 Pfam:SusD
PAMMCEDC_01988 0.0 - - - P - - - Arylsulfatase
PAMMCEDC_01989 4.58e-224 gap 1.2.1.12 - C ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PAMMCEDC_01990 4.95e-93 mscL - - M ko:K03282 - ko00000,ko02000 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PAMMCEDC_01991 0.0 guaA 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the synthesis of GMP from XMP
PAMMCEDC_01992 0.0 - 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Psort location Cytoplasmic, score
PAMMCEDC_01993 4.68e-281 pepQ 3.4.11.9, 3.4.13.9 - E ko:K01262,ko:K01271 - ko00000,ko01000,ko01002 xaa-pro dipeptidase K01271
PAMMCEDC_01994 1.63e-95 - - - - - - - -
PAMMCEDC_01995 1.12e-266 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Biotin-lipoyl like
PAMMCEDC_01996 0.0 - - - V ko:K03296 - ko00000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMMCEDC_01997 0.0 - - - M - - - Outer membrane efflux protein
PAMMCEDC_01998 4.67e-39 - - - S - - - Transglycosylase associated protein
PAMMCEDC_01999 3.48e-62 - - - - - - - -
PAMMCEDC_02001 5.06e-316 - - - G - - - beta-fructofuranosidase activity
PAMMCEDC_02002 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain protein
PAMMCEDC_02003 0.0 - - - P - - - Type I phosphodiesterase / nucleotide pyrophosphatase
PAMMCEDC_02004 0.0 - 3.2.1.51 GH29 G ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 F5 8 type C domain protein
PAMMCEDC_02005 0.0 betC_2 - - P - - - COG COG3119 Arylsulfatase A and related enzymes
PAMMCEDC_02006 1.6e-219 - - - P - - - Right handed beta helix region
PAMMCEDC_02007 1.19e-142 - 3.2.1.51 GH29 G ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 Alpha-L-fucosidase
PAMMCEDC_02008 8.93e-17 - - - S - - - Domain of unknonw function from B. Theta Gene description (DUF3874)
PAMMCEDC_02009 0.0 - - - G - - - hydrolase, family 65, central catalytic
PAMMCEDC_02010 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_02011 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_02012 1.02e-236 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PAMMCEDC_02013 8.29e-100 - - - - - - - -
PAMMCEDC_02015 6.02e-135 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PAMMCEDC_02016 0.0 pruA 1.2.1.3, 1.2.1.88, 1.5.5.2 - C ko:K00128,ko:K00294,ko:K13821 ko00010,ko00053,ko00071,ko00250,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00250,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000,ko03000 Proline dehydrogenase
PAMMCEDC_02018 2.75e-153 - - - - - - - -
PAMMCEDC_02019 5.5e-97 yjbQ - - S - - - Secondary thiamine-phosphate synthase enzyme
PAMMCEDC_02020 1.52e-284 - - - V - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_02021 6.16e-152 - - - V ko:K02003 - ko00000,ko00002,ko02000 COG1136 ABC-type antimicrobial peptide transport system ATPase component
PAMMCEDC_02022 0.0 - - - S - - - COG NOG26882 non supervised orthologous group
PAMMCEDC_02023 2.14e-166 rsmE 2.1.1.193 - J ko:K09761 - ko00000,ko01000,ko03009 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PAMMCEDC_02024 9.09e-125 - - - S ko:K08999 - ko00000 Conserved protein
PAMMCEDC_02025 1.27e-307 nupG - - G ko:K03289,ko:K11537 - ko00000,ko02000 transport of nucleosides, permease protein K03289
PAMMCEDC_02026 1.39e-134 - - - S - - - Domain of unknown function (DUF5024)
PAMMCEDC_02027 2.1e-128 - - - - - - - -
PAMMCEDC_02028 3.83e-104 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PAMMCEDC_02029 2.85e-291 mro 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Converts alpha-aldose to the beta-anomer
PAMMCEDC_02030 0.0 - - - E - - - Domain of Unknown Function with PDB structure (DUF3858)
PAMMCEDC_02031 0.0 - - - E - - - Domain of Unknown Function with PDB structure (DUF3857)
PAMMCEDC_02032 5.87e-127 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PAMMCEDC_02033 1.07e-306 - - - K - - - DNA-templated transcription, initiation
PAMMCEDC_02034 3.46e-200 - - - H - - - Methyltransferase domain
PAMMCEDC_02035 8.41e-260 - - - S ko:K07098 - ko00000 Calcineurin-like phosphoesterase superfamily domain
PAMMCEDC_02036 4.46e-299 rlmI 2.1.1.191 - J ko:K06969 - ko00000,ko01000,ko03009 SAM-dependent
PAMMCEDC_02037 5.91e-151 rnd - - L - - - 3'-5' exonuclease
PAMMCEDC_02038 1.49e-132 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02039 0.0 ftsK - - D ko:K03466 - ko00000,ko03036 COG1674 DNA segregation ATPase FtsK SpoIIIE and related
PAMMCEDC_02040 2e-143 lolA - - M ko:K03634 - ko00000 COG NOG19151 non supervised orthologous group
PAMMCEDC_02041 4.14e-230 trxB 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PAMMCEDC_02042 0.0 - - - S ko:K07263 - ko00000,ko01000,ko01002 Belongs to the peptidase M16 family
PAMMCEDC_02043 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_02044 8.69e-167 - - - V ko:K01990 - ko00000,ko00002,ko02000 COG1131 ABC-type multidrug transport system ATPase component
PAMMCEDC_02045 5.23e-116 mepS 3.4.17.13 - M ko:K13694 - ko00000,ko01000,ko01002,ko01011 NlpC P60 family
PAMMCEDC_02046 0.0 ppaX 3.1.3.18 - V ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 ko00000,ko00001,ko01000 HAD hydrolase, family IA, variant 1
PAMMCEDC_02047 6.75e-67 rplU - - J ko:K02888 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to 23S rRNA in the presence of protein L20
PAMMCEDC_02048 1.24e-56 rpmA - - J ko:K02899 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL27 family
PAMMCEDC_02049 7.24e-154 thiN 2.7.6.2 - H ko:K00949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 Thiamine diphosphokinase
PAMMCEDC_02050 9.65e-135 pnuC - - H ko:K03811 - ko00000,ko02000 nicotinamide mononucleotide transporter
PAMMCEDC_02051 2.36e-307 serS 6.1.1.11 - J ko:K01875 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Psort location Cytoplasmic, score
PAMMCEDC_02052 3.2e-284 - - - G - - - Major Facilitator Superfamily
PAMMCEDC_02053 0.0 gltA 1.3.1.1, 1.4.1.13, 1.4.1.14 - C ko:K00266,ko:K17722 ko00240,ko00250,ko00410,ko00770,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00240,map00250,map00410,map00770,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 9.97
PAMMCEDC_02055 5.46e-185 - - - S - - - COG NOG28261 non supervised orthologous group
PAMMCEDC_02056 0.0 - - - L ko:K06400 - ko00000 Recombinase
PAMMCEDC_02057 3.2e-207 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02058 1.6e-216 - - - - - - - -
PAMMCEDC_02059 5.43e-188 - - - - - - - -
PAMMCEDC_02060 0.0 - - - L - - - AAA domain
PAMMCEDC_02061 2.18e-244 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02062 4.39e-97 - - - L ko:K03630 - ko00000 DNA repair
PAMMCEDC_02063 9.96e-135 - - - L - - - Phage integrase family
PAMMCEDC_02064 4.36e-20 - - - - - - - -
PAMMCEDC_02065 1.21e-53 - - - - - - - -
PAMMCEDC_02066 5.96e-283 - - - - - - - -
PAMMCEDC_02067 6e-83 - - - S ko:K09922 - ko00000 Psort location CytoplasmicMembrane, score
PAMMCEDC_02068 4.77e-42 - - - S - - - Putative member of DMT superfamily (DUF486)
PAMMCEDC_02069 3.13e-46 - - - - - - - -
PAMMCEDC_02070 1.91e-10 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02072 6.4e-176 ttcA - - H ko:K14058 - ko00000,ko03016 Belongs to the TtcA family
PAMMCEDC_02073 0.0 - - - S - - - COG NOG11656 non supervised orthologous group
PAMMCEDC_02074 1.01e-99 - - - O - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_02075 6.64e-215 - - - S - - - UPF0365 protein
PAMMCEDC_02076 8.57e-216 udp 2.4.2.3 - F ko:K00757 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PAMMCEDC_02077 2.29e-112 msrC 1.8.4.14 - T ko:K08968 ko00270,map00270 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_02078 0.0 mnmE - - S ko:K03650 - ko00000,ko01000,ko03016 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PAMMCEDC_02079 1.21e-17 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
PAMMCEDC_02080 1.31e-86 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
PAMMCEDC_02081 3.62e-104 - - - L - - - Transposase IS66 family
PAMMCEDC_02082 1.71e-139 - - - L - - - Transposase IS66 family
PAMMCEDC_02083 3.48e-50 - - - L ko:K07484 - ko00000 COG COG3436 Transposase and inactivated derivatives
PAMMCEDC_02084 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_02085 0.0 - - - P ko:K21572 - ko00000,ko02000 non supervised orthologous group
PAMMCEDC_02086 2.72e-44 - - - U - - - TraM recognition site of TraD and TraG
PAMMCEDC_02087 8.11e-116 - - - U - - - TraM recognition site of TraD and TraG
PAMMCEDC_02088 7.33e-15 - - - U - - - TraM recognition site of TraD and TraG
PAMMCEDC_02089 6.34e-118 - - - U ko:K03205 ko03070,map03070 ko00000,ko00001,ko00002,ko02044 unidirectional conjugation
PAMMCEDC_02090 1.48e-103 - - - - - - - -
PAMMCEDC_02091 1.02e-33 - - - - - - - -
PAMMCEDC_02093 4.68e-124 - - - - - - - -
PAMMCEDC_02094 2.49e-84 - - - S - - - Protein of unknown function, DUF488
PAMMCEDC_02095 2.38e-114 yncA 2.3.1.183 - M ko:K03823 ko00440,ko01130,map00440,map01130 ko00000,ko00001,ko01000 (GNAT) family
PAMMCEDC_02096 1.49e-97 - - - K - - - FR47-like protein
PAMMCEDC_02097 3.07e-134 - - - K - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02098 0.0 - - - C - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02099 1.19e-30 - - - - - - - -
PAMMCEDC_02100 3.27e-19 - - - M - - - COG NOG19089 non supervised orthologous group
PAMMCEDC_02101 1.01e-276 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_02103 0.0 - - - H - - - Psort location OuterMembrane, score
PAMMCEDC_02106 2.08e-62 - - - S ko:K07089 - ko00000 Predicted permease
PAMMCEDC_02107 2.39e-121 - - - S ko:K07089 - ko00000 Predicted permease
PAMMCEDC_02108 1.56e-46 - - - CO - - - redox-active disulfide protein 2
PAMMCEDC_02109 1.34e-66 dsbD 1.8.1.8 - CO ko:K04084,ko:K06196 - ko00000,ko01000,ko02000,ko03110 protein-disulfide reductase activity
PAMMCEDC_02110 1.65e-23 - - - CO - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_02111 1.39e-42 - - - - - - - -
PAMMCEDC_02113 1.98e-74 - - - K - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02115 1.2e-58 - - - J - - - gnat family
PAMMCEDC_02116 0.0 - - - L - - - Integrase core domain
PAMMCEDC_02117 2.17e-25 - - - L - - - IstB-like ATP binding protein
PAMMCEDC_02118 0.0 - - - S ko:K21572 - ko00000,ko02000 Pfam:SusD
PAMMCEDC_02119 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_02120 1.75e-184 - - - - - - - -
PAMMCEDC_02121 0.0 - - - S ko:K21572 - ko00000,ko02000 Pfam:SusD
PAMMCEDC_02122 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_02123 3.69e-278 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_02126 0.0 - - - M ko:K07001 - ko00000 esterase of the alpha-beta hydrolase superfamily
PAMMCEDC_02127 0.0 htpG - - T ko:K04079 ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418 ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147 ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_02128 0.0 clpC - - O ko:K03696 ko01100,map01100 ko00000,ko03110 Belongs to the ClpA ClpB family
PAMMCEDC_02130 0.0 gyrA 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PAMMCEDC_02131 4.54e-284 - - - S - - - tetratricopeptide repeat
PAMMCEDC_02132 4.2e-265 uspA - - T - - - COG0589 Universal stress protein UspA and related nucleotide-binding
PAMMCEDC_02133 1.44e-56 - - - S - - - COG NOG19094 non supervised orthologous group
PAMMCEDC_02134 2.2e-160 - 3.6.1.27 - I ko:K19302 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_02135 8.39e-172 batE - - T - - - COG NOG22299 non supervised orthologous group
PAMMCEDC_02136 0.0 batD - - S - - - COG NOG06393 non supervised orthologous group
PAMMCEDC_02137 1.66e-116 batC - - S - - - Tetratricopeptide repeat protein
PAMMCEDC_02138 2.82e-236 batB - - S ko:K07114 - ko00000,ko02000 Von Willebrand factor type A domain
PAMMCEDC_02139 1.33e-230 batA - - S ko:K07114 - ko00000,ko02000 Von Willebrand factor type A domain
PAMMCEDC_02140 1.75e-254 - - - O - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_02141 1.65e-207 - - - S - - - protein (some members contain a von Willebrand factor type A (vWA) domain)
PAMMCEDC_02142 5.5e-218 moxR - - S ko:K03924 - ko00000,ko01000 ATPase family associated with various cellular activities (AAA)
PAMMCEDC_02143 0.0 - - - L - - - Belongs to the bacterial histone-like protein family
PAMMCEDC_02144 2.56e-55 himA - - L ko:K03530,ko:K04764 - ko00000,ko03032,ko03036,ko03400 COG0776 Bacterial nucleoid DNA-binding protein
PAMMCEDC_02145 1.06e-314 rimO 2.8.4.4 - J ko:K14441 - ko00000,ko01000,ko03009 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12
PAMMCEDC_02146 1.31e-219 ftsY - - U ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PAMMCEDC_02147 5.89e-28 - - - S - - - Domain of unknown function (DUF4295)
PAMMCEDC_02148 1.43e-35 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL33 family
PAMMCEDC_02149 3.44e-58 rpmB - - J ko:K02902 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL28 family
PAMMCEDC_02150 7.87e-111 cinA 3.5.1.42 - S ko:K03742,ko:K03743 ko00760,map00760 ko00000,ko00001,ko01000 Belongs to the CinA family
PAMMCEDC_02151 1.31e-245 tsaD 2.3.1.234 - O ko:K01409 - ko00000,ko01000,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PAMMCEDC_02152 7.31e-213 map 3.4.11.18 - E ko:K01265 - ko00000,ko01000,ko01002 Psort location Cytoplasmic, score
PAMMCEDC_02153 6.33e-50 - - - S - - - COG NOG33517 non supervised orthologous group
PAMMCEDC_02154 4.29e-130 maa 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Psort location Cytoplasmic, score 9.97
PAMMCEDC_02155 2.09e-212 - - - EG - - - EamA-like transporter family
PAMMCEDC_02156 4.54e-205 - - - E ko:K02002 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Substrate binding domain of ABC-type glycine betaine transport system
PAMMCEDC_02157 5.86e-189 opuAB - - P ko:K02001 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 glycine betaine transport system, permease
PAMMCEDC_02158 1.29e-280 proV 3.6.3.32 - P ko:K02000 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 COG4175 ABC-type proline glycine betaine transport system, ATPase component
PAMMCEDC_02159 4.67e-316 - - - T ko:K02481 - ko00000,ko02022 acetoacetate metabolism regulatory protein AtoC
PAMMCEDC_02161 6.45e-151 - - - S - - - Appr-1'-p processing enzyme
PAMMCEDC_02162 0.0 kdpA 3.6.3.12 - P ko:K01546 ko02020,map02020 ko00000,ko00001,ko01000 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
PAMMCEDC_02163 0.0 kdpB 3.6.3.12 - P ko:K01547 ko02020,map02020 ko00000,ko00001,ko01000 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
PAMMCEDC_02164 2.02e-131 kdpC 3.6.3.12 - P ko:K01548 ko02020,map02020 ko00000,ko00001,ko01000 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
PAMMCEDC_02166 2.82e-171 - - - S - - - non supervised orthologous group
PAMMCEDC_02167 3.3e-168 - - - S ko:K07025 - ko00000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_02168 1.4e-151 cat 2.3.1.28 - V ko:K19271 - br01600,ko00000,ko01000,ko01504 Chloramphenicol acetyltransferase
PAMMCEDC_02169 0.0 - 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Aspartate kinase
PAMMCEDC_02170 0.0 otsB 2.4.1.15, 3.1.3.12 GT20 G ko:K16055 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000,ko01003 Trehalose-phosphatase
PAMMCEDC_02171 0.0 - 3.2.1.3 GH15 G ko:K01178 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Glycosyl hydrolases family 15
PAMMCEDC_02172 4.1e-223 per1 3.5.2.6 - V ko:K17836 ko00311,ko01130,ko01501,map00311,map01130,map01501 ko00000,ko00001,ko00002,ko01000,ko01504 COG2367 Beta-lactamase class A
PAMMCEDC_02173 5.96e-110 yvbK 2.3.1.82 - K ko:K03827,ko:K18815 - br01600,ko00000,ko01000,ko01504 Psort location Cytoplasmic, score 8.96
PAMMCEDC_02174 1.92e-198 - - - Q - - - COG NOG10855 non supervised orthologous group
PAMMCEDC_02175 9.41e-84 - - - K - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02176 7.59e-245 - 3.5.3.1 - E ko:K01476 ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146 ko00000,ko00001,ko00002,ko01000 COG0010 Arginase agmatinase formimionoglutamate hydrolase arginase family
PAMMCEDC_02177 9.73e-132 - 3.6.1.13 - L ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_02178 6.19e-195 - - - S - - - COG4422 Bacteriophage protein gp37
PAMMCEDC_02179 4.52e-262 kdpD 2.7.13.3 - T ko:K07646 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Psort location Cytoplasmic, score 8.96
PAMMCEDC_02180 0.0 covS - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_02181 6.59e-151 - - - S ko:K07507 - ko00000,ko02000 Mg2 transporter-C family protein
PAMMCEDC_02182 1.75e-275 rmuC - - S ko:K09760 - ko00000 RmuC family
PAMMCEDC_02183 2.71e-191 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
PAMMCEDC_02184 1.51e-122 - - - S - - - protein containing a ferredoxin domain
PAMMCEDC_02185 1.46e-50 - - - S - - - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
PAMMCEDC_02186 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
PAMMCEDC_02187 2.99e-197 - - - EG - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_02188 2.74e-306 - - - S - - - Conserved protein
PAMMCEDC_02189 1.21e-213 serA 1.1.1.399, 1.1.1.95 - C ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAMMCEDC_02190 4.88e-261 serC 2.6.1.52 - E ko:K00831 ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PAMMCEDC_02191 0.0 dbpA 3.6.4.13 - L ko:K05591 - ko00000,ko01000,ko03009 ATP-independent RNA helicase DbpA
PAMMCEDC_02192 0.0 nqrF 1.6.5.8 - C ko:K00351 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway
PAMMCEDC_02193 1.33e-120 nqrE 1.6.5.8 - C ko:K00350 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PAMMCEDC_02194 6.11e-142 nqrD 1.6.5.8 - C ko:K00349 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PAMMCEDC_02195 1.34e-160 nqrC 1.6.5.8 - C ko:K00348 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PAMMCEDC_02196 9.62e-289 nqrB 1.6.5.8 - C ko:K00347 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PAMMCEDC_02197 0.0 nqrA 1.6.5.8 - C ko:K00346 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PAMMCEDC_02198 5.35e-292 - - - L - - - helicase
PAMMCEDC_02199 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_02200 0.0 - - - S ko:K21572 - ko00000,ko02000 Pfam:SusD
PAMMCEDC_02201 0.0 mutB 5.4.99.2 - I ko:K01847 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_02202 0.0 mutA 5.4.99.2 - I ko:K01847 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 methylmalonyl-CoA mutase small subunit
PAMMCEDC_02203 0.0 - - - P ko:K07085 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_02204 0.0 - - - S ko:K06158 - ko00000,ko03012 Psort location CytoplasmicMembrane, score
PAMMCEDC_02205 9.98e-134 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase
PAMMCEDC_02206 3.18e-236 - - - PT - - - Domain of unknown function (DUF4974)
PAMMCEDC_02207 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_02208 0.0 - - - GM ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_02209 0.0 - - GH63 G ko:K03931 - ko00000 Glycoside hydrolase
PAMMCEDC_02210 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 COG3250 Beta-galactosidase beta-glucuronidase
PAMMCEDC_02211 0.0 - - - E ko:K21572 - ko00000,ko02000 Pfam:SusD
PAMMCEDC_02212 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_02213 7.53e-288 rfbB 4.2.1.46 - M ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PAMMCEDC_02214 5.36e-122 - - - S ko:K07095 - ko00000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_02215 0.0 ppk 2.7.4.1 - H ko:K00937 ko00190,ko03018,map00190,map03018 ko00000,ko00001,ko01000,ko03019 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PAMMCEDC_02218 5.12e-93 - - - H - - - Outer membrane protein beta-barrel family
PAMMCEDC_02219 9.29e-148 - - - V - - - Peptidase C39 family
PAMMCEDC_02220 0.0 - - - C - - - Iron-sulfur cluster-binding domain
PAMMCEDC_02221 5.5e-42 - - - - - - - -
PAMMCEDC_02222 1.83e-280 - - - V - - - HlyD family secretion protein
PAMMCEDC_02223 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter, ATP-binding protein
PAMMCEDC_02224 8.61e-222 - - - - - - - -
PAMMCEDC_02225 2.18e-51 - - - - - - - -
PAMMCEDC_02226 6.19e-94 - - - S - - - Domain of unknown function (DUF3244)
PAMMCEDC_02227 0.0 - - - S - - - Tetratricopeptide repeat protein
PAMMCEDC_02228 2.74e-162 - - - S - - - Radical SAM superfamily
PAMMCEDC_02229 8.4e-85 - - - - - - - -
PAMMCEDC_02232 2.01e-20 - - - C - - - Radical SAM domain protein
PAMMCEDC_02233 0.0 - - - P - - - Outer membrane protein beta-barrel family
PAMMCEDC_02234 1.37e-43 - - - P - - - Outer membrane protein beta-barrel family
PAMMCEDC_02235 0.0 - - - P - - - Outer membrane protein beta-barrel family
PAMMCEDC_02236 3.78e-148 - - - V - - - Peptidase C39 family
PAMMCEDC_02237 4.11e-223 - - - - - - - -
PAMMCEDC_02238 1.36e-91 - - - S - - - Domain of unknown function (DUF3244)
PAMMCEDC_02239 0.0 - - - S - - - Tetratricopeptide repeat protein
PAMMCEDC_02240 1.16e-149 - - - F - - - Cytidylate kinase-like family
PAMMCEDC_02241 0.0 - - - V - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_02242 0.0 aprN - - M - - - Belongs to the peptidase S8 family
PAMMCEDC_02243 1.42e-254 xseA 3.1.11.6 - L ko:K03601 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PAMMCEDC_02244 8.52e-37 xseB 3.1.11.6 - L ko:K03602 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PAMMCEDC_02245 3.54e-259 ilvE 2.6.1.42 - EH ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 COG0115 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase
PAMMCEDC_02246 2.14e-140 - - - S - - - Protein of unknown function (DUF975)
PAMMCEDC_02247 8.77e-189 trmB 2.1.1.33 - J ko:K03439 - ko00000,ko01000,ko03016 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PAMMCEDC_02248 9.11e-260 mrp - - D ko:K03593 - ko00000,ko03029,ko03036 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
PAMMCEDC_02249 0.0 - - - U - - - Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PAMMCEDC_02250 7.06e-81 - - - K - - - Transcriptional regulator
PAMMCEDC_02251 2.49e-95 nlpE - - MP - - - lipoprotein NlpE involved in copper resistance
PAMMCEDC_02252 5.65e-295 - - - V ko:K01992 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_02253 7.6e-269 - - - CP ko:K01992 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_02254 7.23e-217 - - - M ko:K01993 - ko00000 Auxiliary transport protein, membrane fusion protein (MFP) family protein
PAMMCEDC_02255 0.0 - - - MU - - - Psort location OuterMembrane, score
PAMMCEDC_02256 1.19e-180 - - - S - - - COG NOG11650 non supervised orthologous group
PAMMCEDC_02257 1.17e-219 mdh 1.1.1.37 - C ko:K00024 ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible oxidation of malate to oxaloacetate
PAMMCEDC_02258 0.0 - - - S - - - Endonuclease Exonuclease Phosphatase
PAMMCEDC_02259 1.12e-121 ibrB - - K - - - Psort location Cytoplasmic, score
PAMMCEDC_02260 0.0 - - - S - - - Phosphoadenosine phosphosulfate reductase family
PAMMCEDC_02261 4.28e-93 - - - S - - - COG NOG32529 non supervised orthologous group
PAMMCEDC_02262 0.0 gdh 1.4.1.4 - C ko:K00262 ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100 ko00000,ko00001,ko01000 Belongs to the Glu Leu Phe Val dehydrogenases family
PAMMCEDC_02263 0.0 ppsA - - GKT - - - Pyruvate phosphate dikinase, PEP pyruvate binding domain
PAMMCEDC_02264 1.77e-103 - - - S - - - Calycin-like beta-barrel domain
PAMMCEDC_02265 1.89e-276 - - - S - - - Domain of unknown function (DUF4925)
PAMMCEDC_02266 7.51e-193 - - - S - - - COG NOG19137 non supervised orthologous group
PAMMCEDC_02267 1.07e-284 - - - S - - - non supervised orthologous group
PAMMCEDC_02268 0.0 gdhA 1.4.1.4 - C ko:K00262 ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100 ko00000,ko00001,ko01000 Belongs to the Glu Leu Phe Val dehydrogenases family
PAMMCEDC_02269 3.82e-14 - - - - - - - -
PAMMCEDC_02270 0.0 maeB 1.1.1.38, 1.1.1.40 - C ko:K00027,ko:K00029 ko00620,ko00710,ko01100,ko01120,ko01200,ko02020,map00620,map00710,map01100,map01120,map01200,map02020 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PAMMCEDC_02271 3.15e-278 mtrC - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMMCEDC_02272 0.0 mexF - - V ko:K03296 - ko00000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMMCEDC_02273 0.0 - - - MU - - - Efflux transporter, outer membrane factor lipoprotein, NodT family
PAMMCEDC_02274 2.08e-129 lpxA2 2.3.1.129 - M ko:K00677 ko00540,ko01100,ko01503,map00540,map01100,map01503 ko00000,ko00001,ko00002,ko01000,ko01005 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PAMMCEDC_02275 6.96e-150 - - - K - - - transcriptional regulator, TetR family
PAMMCEDC_02276 2.35e-302 - - - MU - - - Psort location OuterMembrane, score
PAMMCEDC_02277 1.7e-237 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMMCEDC_02278 0.0 czcA - - V ko:K03296 - ko00000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMMCEDC_02279 1.86e-67 - - - E - - - COG NOG19114 non supervised orthologous group
PAMMCEDC_02280 0.0 - - - E - - - COG COG2755 Lysophospholipase L1 and related esterases
PAMMCEDC_02281 1.03e-237 - - - E - - - COG NOG14456 non supervised orthologous group
PAMMCEDC_02282 0.0 algI - - M - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_02284 1.12e-64 - - - - - - - -
PAMMCEDC_02285 0.0 - - - L - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02286 6.31e-222 - - - L - - - DNA repair photolyase K01669
PAMMCEDC_02287 1.11e-167 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02288 1.77e-108 - - - G - - - Cupin domain
PAMMCEDC_02289 5.49e-191 yddR - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02290 1.34e-213 - - - K ko:K18954 - ko00000,ko03000 methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC XylS family) K00567
PAMMCEDC_02292 0.0 - - - K - - - Tetratricopeptide repeat
PAMMCEDC_02293 0.0 dsbD 1.8.1.8 - CO ko:K04084 - ko00000,ko01000,ko03110 cytochrome c biogenesis protein transmembrane region
PAMMCEDC_02294 1.25e-301 - - - S - - - Belongs to the UPF0597 family
PAMMCEDC_02295 3.32e-61 - - - S ko:K06975 - ko00000 GCN5-related N-acetyl-transferase
PAMMCEDC_02296 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_02297 6.93e-154 - - - K - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02298 0.0 agcS - - E ko:K03310 - ko00000 amino acid carrier protein
PAMMCEDC_02299 1.3e-150 - - - S - - - COG NOG25304 non supervised orthologous group
PAMMCEDC_02300 1.47e-137 mug - - L - - - COG3663 G T U mismatch-specific DNA glycosylase
PAMMCEDC_02302 1.69e-135 queE 4.3.99.3 - H ko:K10026 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko01000,ko03016 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
PAMMCEDC_02303 1.68e-76 queD 4.1.2.50, 4.2.3.12 - H ko:K01737 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000,ko03016 Psort location Cytoplasmic, score
PAMMCEDC_02304 1.28e-73 - - - S ko:K09790 - ko00000 Psort location CytoplasmicMembrane, score
PAMMCEDC_02305 4.56e-45 - - - S - - - COG NOG23407 non supervised orthologous group
PAMMCEDC_02306 3.49e-63 - - - D ko:K09888 - ko00000,ko03036 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PAMMCEDC_02307 0.0 rny - - S ko:K18682 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Endoribonuclease that initiates mRNA decay
PAMMCEDC_02308 3.69e-188 - - - - - - - -
PAMMCEDC_02309 2.74e-208 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02310 0.0 pepP 3.4.11.9 - E ko:K01262 - ko00000,ko01000,ko01002 Psort location Cytoplasmic, score
PAMMCEDC_02311 1.85e-307 pepC 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
PAMMCEDC_02312 0.0 recJ - - L ko:K07462 ko03410,ko03430,ko03440,map03410,map03430,map03440 ko00000,ko00001,ko01000,ko03400 single-stranded-DNA-specific exonuclease recJ
PAMMCEDC_02313 0.0 recQ2 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
PAMMCEDC_02314 0.0 - 3.2.1.35 - G ko:K01197 ko00531,ko01100,map00531,map01100 ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042 beta-N-acetylglucosaminidase
PAMMCEDC_02315 7.3e-100 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02316 6.55e-227 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_02317 8.65e-300 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
PAMMCEDC_02318 1.06e-122 - 3.5.1.124 - S ko:K05520 - ko00000,ko01000,ko01002 DJ-1 PfpI family protein
PAMMCEDC_02319 5.87e-83 - - - K - - - Transcriptional regulator, HxlR family
PAMMCEDC_02320 1.85e-204 pheA 4.2.1.51 - E ko:K04518 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PAMMCEDC_02321 2.12e-297 dapL 2.6.1.83 - E ko:K10206,ko:K14261 ko00300,ko01100,ko01110,ko01130,ko01230,map00300,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 COG0436 Aspartate tyrosine aromatic aminotransferase
PAMMCEDC_02322 2e-264 pheB 5.4.99.5 - E ko:K04516 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_02323 3.41e-184 tyrA 1.3.1.12 - E ko:K00210 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 prephenate dehydrogenase
PAMMCEDC_02325 8.74e-62 - - - S - - - Protein of unknown function (DUF2089)
PAMMCEDC_02326 1.1e-229 - - - O ko:K06889 - ko00000 COG COG1073 Hydrolases of the alpha beta superfamily
PAMMCEDC_02327 0.0 - - - H - - - COG4206 Outer membrane cobalamin receptor protein
PAMMCEDC_02328 3.62e-250 - - - S - - - amine dehydrogenase activity
PAMMCEDC_02329 0.0 - - - K - - - Putative DNA-binding domain
PAMMCEDC_02330 6.09e-276 - - - P ko:K02016 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component
PAMMCEDC_02331 3.62e-225 - - - P ko:K02015 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PAMMCEDC_02332 2.08e-240 - 3.6.3.34 - HP ko:K02013 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components
PAMMCEDC_02333 9.64e-307 thrC 4.2.3.1 - E ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Threonine synthase
PAMMCEDC_02334 7.75e-300 - 5.4.2.12 - G ko:K15635 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 homoserine kinase
PAMMCEDC_02335 0.0 thrA 1.1.1.3, 2.7.2.4 - E ko:K12524 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 homoserine dehydrogenase
PAMMCEDC_02336 5.36e-215 - - - M - - - COG NOG19097 non supervised orthologous group
PAMMCEDC_02337 0.0 radA - - O ko:K04485 - ko00000,ko03400 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PAMMCEDC_02338 9.15e-158 - - - S - - - Protein of unknown function (DUF1847)
PAMMCEDC_02339 0.0 - - - S ko:K07137 - ko00000 FAD-dependent
PAMMCEDC_02340 2.72e-124 isiB - - C ko:K03839 - ko00000 Low-potential electron donor to a number of redox enzymes
PAMMCEDC_02341 0.0 bfmBAB 1.2.4.4 - C ko:K11381 ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130 br01601,ko00000,ko00001,ko00002,ko01000 dehydrogenase E1 component
PAMMCEDC_02342 3.67e-310 bfmBB 2.3.1.61 - C ko:K00658 ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 9.26
PAMMCEDC_02343 3.54e-178 lplA 6.3.1.20 - H ko:K03800 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Lipoate-protein ligase
PAMMCEDC_02344 0.0 lpdA 1.8.1.4 - C ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 Dihydrolipoyl dehydrogenase
PAMMCEDC_02345 2.83e-144 - - - K - - - COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PAMMCEDC_02346 0.0 - - - M ko:K02014 - ko00000,ko02000 Psort location OuterMembrane, score 10.00
PAMMCEDC_02347 4.88e-211 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_02348 0.0 prtQ - - O ko:K08303 ko05120,map05120 ko00000,ko00001,ko01000,ko01002 Psort location Cytoplasmic, score 8.96
PAMMCEDC_02349 2.22e-229 metAA 2.3.1.46 - E ko:K00651 ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PAMMCEDC_02350 0.0 - - - S - - - Oxidoreductase NAD-binding domain protein
PAMMCEDC_02351 1.79e-266 - - - MU - - - outer membrane efflux protein
PAMMCEDC_02352 0.0 czcA - - P - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMMCEDC_02353 9e-262 - - - M - - - Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMMCEDC_02354 8.22e-122 - - - - - - - -
PAMMCEDC_02355 0.0 pepO - - O ko:K07386 - ko00000,ko01000,ko01002 Peptidase family M13
PAMMCEDC_02356 0.0 - - - S ko:K06158 - ko00000,ko03012 ABC transporter, ATP-binding protein
PAMMCEDC_02357 0.0 - - - S ko:K09955 - ko00000 Domain of unknown function
PAMMCEDC_02358 0.0 - - - M ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_02359 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_02360 6.73e-243 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PAMMCEDC_02361 7.57e-135 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PAMMCEDC_02362 0.0 rhgT_2 3.1.1.11 - EG ko:K01051 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 Psort location Extracellular, score
PAMMCEDC_02363 2.46e-215 - - - E - - - COG NOG17363 non supervised orthologous group
PAMMCEDC_02364 0.0 - - - S - - - Susd and RagB outer membrane lipoprotein
PAMMCEDC_02365 0.0 - - - P - - - TonB dependent receptor
PAMMCEDC_02366 3.68e-144 - - - U ko:K05595 - ko00000,ko02000 UPF0056 membrane protein
PAMMCEDC_02367 5.57e-247 yjmD_1 - - E - - - Psort location Cytoplasmic, score 9.97
PAMMCEDC_02368 7.58e-306 fucP - - G ko:K02429 - ko00000,ko02000 L-fucose H symporter permease
PAMMCEDC_02369 6.36e-228 - - - S ko:K07045 - ko00000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_02370 6.61e-229 fdh 1.1.1.122 - C ko:K00064 ko00051,ko00053,ko01100,ko01110,ko01120,map00051,map00053,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000 Oxidoreductase, aldo keto reductase family protein
PAMMCEDC_02371 2.6e-198 - - - K - - - helix_turn_helix, arabinose operon control protein
PAMMCEDC_02372 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_02373 3.52e-267 - - - GM ko:K21572 - ko00000,ko02000 Pfam:SusD
PAMMCEDC_02375 1.04e-197 - - - G - - - Glycosyl hydrolase family 43
PAMMCEDC_02376 9.34e-124 - - - G - - - Pectate lyase superfamily protein
PAMMCEDC_02377 1.63e-07 - - - G - - - Pectate lyase superfamily protein
PAMMCEDC_02378 8.96e-205 - - - G - - - Alpha-L-fucosidase
PAMMCEDC_02379 6.69e-66 - 5.1.3.32 - G ko:K03534 - ko00000,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_02381 2.39e-254 - - - M - - - peptidase S41
PAMMCEDC_02382 1.11e-201 - - - S - - - COG NOG19130 non supervised orthologous group
PAMMCEDC_02383 0.0 parC - - L ko:K02621 - ko00000,ko01000,ko02048,ko03032,ko03036 COG0188 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) A subunit
PAMMCEDC_02384 0.0 glyQS 6.1.1.14 - J ko:K01880 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of glycine to tRNA(Gly)
PAMMCEDC_02385 6.43e-153 mip 5.2.1.8 - M ko:K03773 - ko00000,ko01000,ko03110 FKBP-type peptidyl-prolyl cis-trans isomerase
PAMMCEDC_02386 1.93e-241 asd 1.2.1.11 - E ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PAMMCEDC_02387 0.0 ybaL_1 - - PT - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_02388 4.84e-171 hypB - - H ko:K22132 - ko00000,ko03016 involved in molybdopterin and thiamine biosynthesis family 1
PAMMCEDC_02389 1.44e-148 lolD - - V ko:K09810 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner
PAMMCEDC_02390 5.92e-235 - - - S - - - Fimbrillin-A associated anchor proteins Mfa1 and Mfa2
PAMMCEDC_02391 0.0 yqhD - - C ko:K08325 ko00640,map00640 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PAMMCEDC_02392 5.5e-200 yitL - - S ko:K00243 - ko00000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_02393 8.85e-217 - - - S - - - COG NOG36047 non supervised orthologous group
PAMMCEDC_02395 1.17e-305 - - - MU ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 Psort location OuterMembrane, score 10.00
PAMMCEDC_02396 6.19e-243 - - - M ko:K02005 - ko00000 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMMCEDC_02397 9.41e-297 macB_3 - - V ko:K02004 - ko00000,ko00002,ko02000 Efflux ABC transporter, permease protein
PAMMCEDC_02398 5.91e-298 - - - V ko:K02004 - ko00000,ko00002,ko02000 Efflux ABC transporter, permease protein
PAMMCEDC_02399 8.68e-169 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PAMMCEDC_02400 1.1e-229 glk 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 9.26
PAMMCEDC_02401 7.42e-89 - 5.1.3.32 - G ko:K03534 - ko00000,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_02402 1.83e-06 - - - - - - - -
PAMMCEDC_02404 0.0 - - - V - - - MATE efflux family protein
PAMMCEDC_02405 2.81e-142 - - - M - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02406 2.29e-274 - - - L - - - Arm DNA-binding domain
PAMMCEDC_02407 9.2e-243 ruvB 3.6.4.12 - L ko:K03551 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PAMMCEDC_02408 0.0 cap - - S - - - COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PAMMCEDC_02409 4.63e-308 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_02410 0.0 - - - E - - - COG NOG04781 non supervised orthologous group
PAMMCEDC_02411 0.0 - 3.6.4.13 - L ko:K05592 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 Belongs to the DEAD box helicase family
PAMMCEDC_02412 2.47e-101 - - - - - - - -
PAMMCEDC_02413 0.0 - - - P - - - COG COG4771 Outer membrane receptor for ferrienterochelin and colicins
PAMMCEDC_02414 1.74e-68 - - - P ko:K08364 - ko00000,ko02000 Heavy-metal-associated domain
PAMMCEDC_02415 2.77e-41 - - - K ko:K07727 - ko00000,ko03000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_02416 8.86e-56 - - - - - - - -
PAMMCEDC_02417 2.06e-144 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_02418 8.24e-137 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_02419 3.66e-188 - - - S ko:K07052 - ko00000 CAAX amino terminal protease family
PAMMCEDC_02420 0.0 - - - E - - - Acetyl xylan esterase (AXE1)
PAMMCEDC_02422 1.29e-92 - - - S - - - Family of unknown function (DUF3836)
PAMMCEDC_02424 6.52e-218 ribF 2.7.1.26, 2.7.7.2 - H ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 riboflavin biosynthesis protein
PAMMCEDC_02425 2.53e-146 yihX 3.1.3.10, 3.1.3.104 - S ko:K07025,ko:K20866,ko:K21063 ko00010,ko00740,ko01100,ko01110,ko01120,map00010,map00740,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_02426 0.0 yoaB 3.6.3.8 - P ko:K01537 - ko00000,ko01000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_02428 1.62e-110 - - - - - - - -
PAMMCEDC_02429 2.21e-276 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_02430 3.57e-72 - - - S ko:K07334 - ko00000,ko02048 RelE-like toxin of type II toxin-antitoxin system HigB
PAMMCEDC_02431 1.6e-269 higA - - K ko:K18831 - ko00000,ko02048,ko03000 Pfam:DUF955
PAMMCEDC_02433 0.0 - - - M - - - Glycosyl Hydrolase Family 88
PAMMCEDC_02434 4.58e-114 - - - - - - - -
PAMMCEDC_02435 6.03e-152 - - - - - - - -
PAMMCEDC_02436 3.03e-48 - - - P - - - Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PAMMCEDC_02437 5.64e-112 - - - O - - - Psort location Cytoplasmic, score 9.26
PAMMCEDC_02438 5.95e-77 - - - K - - - Transcriptional regulator, MarR family
PAMMCEDC_02439 4e-156 ddpX 3.4.13.22 - M ko:K08641 ko01502,ko02020,map01502,map02020 ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
PAMMCEDC_02440 8.04e-277 - - - L - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02441 7.71e-157 - - - K - - - COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PAMMCEDC_02442 0.0 - 2.7.13.3 - T ko:K07636 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 His Kinase A (phosphoacceptor) domain
PAMMCEDC_02443 0.0 - - - P - - - Psort location OuterMembrane, score
PAMMCEDC_02444 2.21e-94 sufE - - S ko:K02426 - ko00000 COG2166 SufE protein probably involved in Fe-S center assembly
PAMMCEDC_02445 3.01e-253 ywaD - - S - - - glutaminyl-peptide cyclotransferase (glutaminyl cyclase) K00683
PAMMCEDC_02446 0.0 - 3.4.13.19 - E ko:K01273,ko:K01274 - ko00000,ko00537,ko01000,ko01002,ko04147 Renal dipeptidase family protein
PAMMCEDC_02447 2.76e-217 ptb 2.3.1.19 - C ko:K00634 ko00650,ko01100,map00650,map01100 ko00000,ko00001,ko01000 Phosphate acetyl/butaryl transferase
PAMMCEDC_02448 2.81e-259 buk 2.7.2.7 - H ko:K00929 ko00650,ko01100,map00650,map01100 ko00000,ko00001,ko01000 Belongs to the acetokinase family
PAMMCEDC_02449 7.49e-300 - - - S - - - Domain of unknonw function from B. Theta Gene description (DUF3874)
PAMMCEDC_02450 1.73e-93 - - - - - - - -
PAMMCEDC_02451 0.0 - - - P - - - Outer membrane protein beta-barrel family
PAMMCEDC_02452 1.66e-71 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_02453 1.4e-104 asnC - - K ko:K03718 - ko00000,ko03000 Transcriptional regulator, AsnC family
PAMMCEDC_02454 1.19e-84 - - - - - - - -
PAMMCEDC_02455 1.71e-302 corC_1 - - P ko:K03699 - ko00000,ko02042 Psort location CytoplasmicMembrane, score
PAMMCEDC_02456 2.42e-127 - 3.6.1.55 - F ko:K03574 - ko00000,ko01000,ko03400 NUDIX domain
PAMMCEDC_02457 0.0 - - - S - - - Tetratricopeptide repeat protein
PAMMCEDC_02458 0.0 - - - H - - - Psort location OuterMembrane, score
PAMMCEDC_02459 0.0 topA 5.99.1.2 - L ko:K03168 - ko00000,ko01000,ko03032,ko03400 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PAMMCEDC_02460 2.82e-122 aroK 2.7.1.71 - F ko:K00891 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PAMMCEDC_02461 0.0 speA 4.1.1.19 - H ko:K01585 ko00330,ko01100,map00330,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the biosynthesis of agmatine from arginine
PAMMCEDC_02462 5.59e-174 argB 2.7.2.8 - F ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the acetylglutamate kinase family. ArgB subfamily
PAMMCEDC_02463 1.03e-112 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PAMMCEDC_02464 1.75e-105 - - - C - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02465 4.34e-139 - - - S - - - Putative auto-transporter adhesin, head GIN domain
PAMMCEDC_02466 5.26e-172 - - - S ko:K07043 - ko00000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_02467 0.0 - - - Q - - - COG3458 Acetyl esterase (deacetylase)
PAMMCEDC_02468 2.28e-139 - - - - - - - -
PAMMCEDC_02469 3.91e-51 - - - S - - - transposase or invertase
PAMMCEDC_02471 3.99e-142 - - - K - - - helix_turn_helix, arabinose operon control protein
PAMMCEDC_02472 3.73e-36 - - - D - - - Domain of unknown function
PAMMCEDC_02474 4.12e-227 - - - - - - - -
PAMMCEDC_02475 7.57e-268 - - - S - - - Radical SAM superfamily
PAMMCEDC_02476 3.87e-33 - - - - - - - -
PAMMCEDC_02477 1.03e-283 araJ - - EGP ko:K08156 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_02478 5.68e-91 - - - S - - - COG NOG29451 non supervised orthologous group
PAMMCEDC_02479 4.32e-105 rimP - - J ko:K09748 - ko00000,ko03009 Required for maturation of 30S ribosomal subunits
PAMMCEDC_02480 4.46e-293 nusA - - K ko:K02600 - ko00000,ko03009,ko03021 Participates in both transcription termination and antitermination
PAMMCEDC_02481 0.0 infB - - J ko:K02519 - ko00000,ko03012,ko03029 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PAMMCEDC_02482 2.62e-105 cvpA - - S ko:K03558 - ko00000 Psort location CytoplasmicMembrane, score
PAMMCEDC_02483 0.0 sufB - - O ko:K09014 - ko00000 Cysteine desulfurase
PAMMCEDC_02484 1.62e-174 sufC - - O ko:K09013 - ko00000,ko02000 COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component
PAMMCEDC_02485 0.0 sufD - - O ko:K09015 - ko00000 COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component
PAMMCEDC_02486 1.22e-292 sufS 2.8.1.7, 4.4.1.16 - E ko:K11717 ko00450,ko01100,map00450,map01100 ko00000,ko00001,ko01000 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family
PAMMCEDC_02487 0.0 ygjK - GH63 G ko:K03931 - ko00000 Glycoside hydrolase
PAMMCEDC_02488 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 COG3250 Beta-galactosidase beta-glucuronidase
PAMMCEDC_02489 7.85e-139 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_02490 3.87e-56 - - - S - - - COG NOG18433 non supervised orthologous group
PAMMCEDC_02491 0.0 - - - GM ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_02492 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_02493 0.0 - - - KT - - - tetratricopeptide repeat
PAMMCEDC_02494 9.96e-147 rnhB 3.1.26.4 - L ko:K03470 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PAMMCEDC_02495 0.0 fucP - - G ko:K02429 - ko00000,ko02000 L-fucose H symporter permease
PAMMCEDC_02496 0.0 fucI 5.3.1.25, 5.3.1.3 - G ko:K01818 ko00051,ko01120,map00051,map01120 ko00000,ko00001,ko01000 Converts the aldose L-fucose into the corresponding ketose L-fuculose
PAMMCEDC_02497 1.15e-237 - - - K - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02498 0.0 gpmI 5.4.2.12 - G ko:K15633 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PAMMCEDC_02499 1.95e-140 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02500 1.42e-291 - - - M - - - Phosphate-selective porin O and P
PAMMCEDC_02501 0.0 - - - O - - - Psort location Extracellular, score
PAMMCEDC_02502 2.17e-242 - - - M - - - Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
PAMMCEDC_02503 2e-288 ganB 3.2.1.89 - G ko:K01224 - ko00000,ko01000 arabinogalactan endo-1,4-beta-galactosidase
PAMMCEDC_02504 0.0 - 3.2.1.1, 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 M ko:K01176,ko:K01208 ko00500,ko01100,ko04973,map00500,map01100,map04973 ko00000,ko00001,ko01000 Alpha-amylase domain
PAMMCEDC_02505 0.0 - - - S ko:K21571 - ko00000 Domain of unknown function (DUF5115)
PAMMCEDC_02506 1.03e-288 - - - S ko:K21571 - ko00000 Outer membrane protein SusF_SusE
PAMMCEDC_02507 0.0 - - - M ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_02508 0.0 susC - - P ko:K21573 - ko00000,ko02000 TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_02510 1.84e-262 - - - S ko:K21571 - ko00000 SusE outer membrane protein
PAMMCEDC_02511 0.0 - - - M ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_02512 0.0 - - - P ko:K21573 - ko00000,ko02000 TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_02513 0.0 susB 3.2.1.20, 3.2.1.3 GH31,GH97 G ko:K01187,ko:K21574 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 COG NOG06228 non supervised orthologous group
PAMMCEDC_02514 0.0 - 3.2.1.135 GH13 G ko:K21575 - ko00000,ko01000 Belongs to the glycosyl hydrolase 13 family
PAMMCEDC_02516 0.0 - - - S ko:K21557 - ko00000,ko03000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_02518 1.07e-172 - - - D - - - Domain of unknown function
PAMMCEDC_02519 5.18e-109 - - - K - - - helix_turn_helix, arabinose operon control protein
PAMMCEDC_02521 0.0 - - - G ko:K16211 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_02522 0.0 malQ 2.4.1.25 GH77 G ko:K00705 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 9.26
PAMMCEDC_02524 0.0 gyrB 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PAMMCEDC_02525 7.11e-48 rpsT - - J ko:K02968 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 16S ribosomal RNA
PAMMCEDC_02527 4.86e-176 recO - - L ko:K03584 ko03440,map03440 ko00000,ko00001,ko03400 Involved in DNA repair and RecF pathway recombination
PAMMCEDC_02529 1.46e-91 - - - S ko:K09117 - ko00000 YqeY-like protein
PAMMCEDC_02530 2.25e-301 ftsZ - - D ko:K03531 ko04112,map04112 ko00000,ko00001,ko02048,ko03036,ko04812 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PAMMCEDC_02531 0.0 ftsA - - D ko:K03590 ko04112,map04112 ko00000,ko00001,ko03036,ko04812 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PAMMCEDC_02532 6.35e-174 ftsQ - - M ko:K03589 ko04112,map04112 ko00000,ko00001,ko03036 Psort location Cytoplasmic, score 8.96
PAMMCEDC_02533 0.0 murC 6.3.2.8 - M ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Belongs to the MurCDEF family
PAMMCEDC_02534 2.53e-264 murG 2.4.1.227 GT28 M ko:K02563 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PAMMCEDC_02535 1.79e-316 ftsW - - D ko:K03588 ko04112,map04112 ko00000,ko00001,ko02000,ko03036 Belongs to the SEDS family
PAMMCEDC_02536 0.0 murD 6.3.2.9 - M ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PAMMCEDC_02537 1.34e-296 mraY 2.7.8.13 - M ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PAMMCEDC_02538 0.0 murE 6.3.2.13 - M ko:K01928 ko00300,ko00550,map00300,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PAMMCEDC_02539 0.0 ftsI 3.4.16.4 - M ko:K03587 ko00550,ko01501,map00550,map01501 ko00000,ko00001,ko01000,ko01011,ko03036 Cell division protein FtsI penicillin-binding protein
PAMMCEDC_02540 1.65e-76 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02541 1.72e-212 rsmH 2.1.1.199 - J ko:K03438 - ko00000,ko01000,ko03009 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PAMMCEDC_02542 1.06e-109 mraZ - - K ko:K03925 - ko00000 Belongs to the MraZ family
PAMMCEDC_02543 6.48e-209 - - - I - - - Acyl-transferase
PAMMCEDC_02544 4.2e-240 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02545 0.0 dgt 3.1.5.1 - F ko:K01129 ko00230,map00230 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PAMMCEDC_02546 2.38e-99 dut 3.6.1.23 - F ko:K01520 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
PAMMCEDC_02547 0.0 - - - S - - - Tetratricopeptide repeat protein
PAMMCEDC_02548 1.19e-194 - - - S - - - COG NOG29315 non supervised orthologous group
PAMMCEDC_02549 5.09e-264 envC - - D - - - Peptidase, M23
PAMMCEDC_02550 0.0 - - - N - - - IgA Peptidase M64
PAMMCEDC_02551 1.04e-69 - - - S - - - RNA recognition motif
PAMMCEDC_02552 2.88e-220 glsA 3.5.1.2 - E ko:K01425 ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230 ko00000,ko00001,ko01000 Belongs to the glutaminase family
PAMMCEDC_02553 0.0 ispG 1.17.7.1, 1.17.7.3 - I ko:K03526 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
PAMMCEDC_02554 2.14e-105 purE 5.4.99.18 - F ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PAMMCEDC_02555 9.85e-88 gcvH - - E ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 ko00000,ko00001,ko00002 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
PAMMCEDC_02556 6.34e-147 - - - I - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_02557 3.83e-314 rpoN - - K ko:K03092 ko02020,ko05111,map02020,map05111 ko00000,ko00001,ko03021 COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog
PAMMCEDC_02558 0.0 pepP 3.4.11.9 - E ko:K01262 - ko00000,ko01000,ko01002 Psort location Cytoplasmic, score
PAMMCEDC_02559 2.27e-216 - 1.97.1.4 - C ko:K04069 - ko00000,ko01000 4Fe-4S single cluster domain
PAMMCEDC_02560 0.0 - 2.3.1.54, 4.1.1.83 - C ko:K00656,ko:K18427 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 ko00000,ko00001,ko01000 Pyruvate formate lyase-like
PAMMCEDC_02562 0.0 udk2 2.7.1.48 - FJ ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 Phosphoribulokinase Uridine kinase family
PAMMCEDC_02563 0.0 - - - P ko:K03324 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_02564 0.0 - - - P ko:K03324 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_02565 4.26e-111 - - - L - - - COG3328 Transposase and inactivated derivatives
PAMMCEDC_02566 1.38e-126 - - - L - - - Transposase, Mutator family
PAMMCEDC_02567 3.54e-197 - 5.2.1.8 - M ko:K03772,ko:K03773 - ko00000,ko01000,ko03110 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
PAMMCEDC_02568 2.26e-135 fklB 5.2.1.8 - G ko:K03772,ko:K03773 - ko00000,ko01000,ko03110 Peptidyl-prolyl cis-trans isomerase
PAMMCEDC_02569 1.69e-167 cobB - - K ko:K12410 - ko00000,ko01000 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PAMMCEDC_02570 8.53e-38 rubR - - C - - - Psort location Cytoplasmic, score
PAMMCEDC_02571 0.0 pnp 2.7.7.8 - J ko:K00962 ko00230,ko00240,ko03018,map00230,map00240,map03018 ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
PAMMCEDC_02572 4.11e-273 - - - O - - - COG NOG14454 non supervised orthologous group
PAMMCEDC_02573 3.41e-97 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PAMMCEDC_02574 1.07e-93 hinT - - FG ko:K02503 - ko00000,ko04147 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family
PAMMCEDC_02575 1.27e-247 manC 2.7.7.13 - M ko:K00971 ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110 ko00000,ko00001,ko00002,ko01000 mannose-1-phosphate guanylyltransferase
PAMMCEDC_02577 0.0 - - - S - - - CarboxypepD_reg-like domain
PAMMCEDC_02578 5.71e-201 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PAMMCEDC_02579 9.33e-125 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PAMMCEDC_02580 6.83e-312 - - - S - - - CarboxypepD_reg-like domain
PAMMCEDC_02581 2.33e-35 - - - S - - - COG NOG17292 non supervised orthologous group
PAMMCEDC_02582 4.73e-216 - - - O - - - SPFH Band 7 PHB domain protein
PAMMCEDC_02584 0.0 - - - L - - - COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member
PAMMCEDC_02585 2.17e-147 yciO - - J - - - Belongs to the SUA5 family
PAMMCEDC_02586 1.05e-188 mscS - - M ko:K03442 - ko00000,ko02000 Small-conductance mechanosensitive channel
PAMMCEDC_02587 2.11e-293 fprA 1.6.3.4 - C ko:K22405 - ko00000,ko01000 anaerobic nitric oxide reductase flavorubredoxin
PAMMCEDC_02588 3.27e-228 - - - S ko:K07139 - ko00000 radical SAM protein, TIGR01212 family
PAMMCEDC_02589 0.0 dpp 3.4.14.5 - EU ko:K01278 ko04974,map04974 ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 Peptidase, S9A B C family, catalytic domain protein
PAMMCEDC_02590 7.31e-213 lipA 2.8.1.8 - H ko:K03644 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
PAMMCEDC_02591 3.16e-232 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_02592 2.4e-166 rsmI_1 2.1.1.198 - H ko:K07056 - ko00000,ko01000,ko03009 Psort location Cytoplasmic, score 8.96
PAMMCEDC_02593 3.63e-249 - - - O - - - Zn-dependent protease
PAMMCEDC_02594 1.84e-202 fabI 1.3.1.10, 1.3.1.9 - I ko:K00208 ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Enoyl- acyl-carrier-protein reductase NADH
PAMMCEDC_02595 0.0 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PAMMCEDC_02596 4.52e-304 - - - O - - - Domain of unknown function (DUF4861)
PAMMCEDC_02597 0.0 xynB_10 - - G - - - Belongs to the glycosyl hydrolase 43 family
PAMMCEDC_02598 5.93e-119 - - - K ko:K03088 - ko00000,ko03021 helix_turn_helix, Lux Regulon
PAMMCEDC_02599 2.6e-278 - - - PT - - - Domain of unknown function (DUF4974)
PAMMCEDC_02600 0.0 - - - P - - - TonB dependent receptor
PAMMCEDC_02601 0.0 - - - F ko:K21572 - ko00000,ko02000 Pfam:SusD
PAMMCEDC_02602 7.56e-288 - - - M - - - Protein of unknown function, DUF255
PAMMCEDC_02603 5.78e-67 - - - CO - - - Redoxin
PAMMCEDC_02604 1.22e-233 - - - CO - - - Redoxin
PAMMCEDC_02605 4.02e-281 - 4.1.1.3 - C ko:K01572 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000,ko02000 sodium ion-translocating decarboxylase, beta subunit
PAMMCEDC_02606 0.0 cfiA 6.4.1.1 - C ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 ko00000,ko00001,ko00002,ko01000 COG5016 Pyruvate oxaloacetate carboxyltransferase
PAMMCEDC_02607 2.4e-32 - 4.1.1.3 - C ko:K01573 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000,ko02000 Sodium pump decarboxylase gamma subunit
PAMMCEDC_02608 4.07e-122 - - - C - - - Nitroreductase family
PAMMCEDC_02609 4.87e-155 - 3.1.3.18 - S ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 ko00000,ko00001,ko01000 haloacid dehalogenase-like hydrolase
PAMMCEDC_02610 1.24e-232 pfkA 2.7.1.11 - F ko:K00850 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230 ko00000,ko00001,ko00002,ko01000,ko01009,ko03019 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PAMMCEDC_02611 1.87e-97 - - - S ko:K15977 - ko00000 Psort location CytoplasmicMembrane, score 9.46
PAMMCEDC_02612 2.52e-239 - - - P - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02613 2.15e-195 - - - P - - - ATP-binding protein involved in virulence
PAMMCEDC_02614 4.93e-214 - - - EG - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_02615 2.08e-204 - - - IQ - - - Oxidoreductase, short chain dehydrogenase reductase family protein
PAMMCEDC_02616 1.71e-303 - - - C - - - Oxidoreductase, FAD FMN-binding protein
PAMMCEDC_02617 1.7e-187 - 1.3.1.22 - S ko:K12343 ko00140,map00140 ko00000,ko00001,ko01000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_02618 0.0 prpC 2.3.3.1, 2.3.3.5 - C ko:K01647,ko:K01659 ko00020,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00640,map01100,map01110,map01120,map01130,map01200,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PAMMCEDC_02619 1.1e-281 icd 1.1.1.42 - C ko:K00031 ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146 br01601,ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PAMMCEDC_02620 0.0 acnA 4.2.1.3 - C ko:K01681 ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PAMMCEDC_02621 0.0 - - - L - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02622 6.98e-78 - - - S - - - thioesterase family
PAMMCEDC_02623 1.54e-216 - - - S - - - COG NOG14441 non supervised orthologous group
PAMMCEDC_02624 0.0 topB 5.99.1.2 - L ko:K03169 - ko00000,ko01000,ko03032 COG0550 Topoisomerase IA
PAMMCEDC_02625 0.0 rsmF - - J - - - NOL1 NOP2 sun family
PAMMCEDC_02626 2.68e-161 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_02627 2.12e-125 rpoE - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PAMMCEDC_02628 4.84e-71 - - - S - - - Domain of unknown function (DUF5056)
PAMMCEDC_02629 9.92e-201 thyA 2.1.1.45 - F ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PAMMCEDC_02630 3.63e-115 folA 1.5.1.3 - H ko:K00287 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PAMMCEDC_02631 3.02e-111 asnC - - K ko:K03718 - ko00000,ko03000 Transcriptional regulator
PAMMCEDC_02632 0.0 - - - S - - - IgA Peptidase M64
PAMMCEDC_02633 8.07e-128 - - - K - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02634 7.46e-101 - - - U ko:K03559 - ko00000,ko02000 COG NOG14448 non supervised orthologous group
PAMMCEDC_02635 1.29e-126 - - - U - - - COG NOG14449 non supervised orthologous group
PAMMCEDC_02636 8.76e-99 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_02637 3.62e-170 exbB - - U ko:K03561 - ko00000,ko02000 MotA TolQ ExbB proton channel family
PAMMCEDC_02639 2.14e-187 tatD - - L ko:K03424 - ko00000,ko01000 hydrolase, TatD family
PAMMCEDC_02640 7.21e-236 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29 - H ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the FPP GGPP synthase family
PAMMCEDC_02641 7.09e-153 - - - U ko:K03832 - ko00000,ko02000 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PAMMCEDC_02642 1.55e-157 cmk 2.7.4.25 - F ko:K00945 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the cytidylate kinase family. Type 1 subfamily
PAMMCEDC_02643 2.86e-212 ispH 1.17.7.4 - IM ko:K03527 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PAMMCEDC_02644 1.02e-231 pfkA 2.7.1.11 - F ko:K00850 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230 ko00000,ko00001,ko00002,ko01000,ko01009,ko03019 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PAMMCEDC_02645 3.44e-261 argK - - E ko:K07588 - ko00000,ko01000 Lao Ao transport system ATPase
PAMMCEDC_02646 2.39e-253 - - - S - - - Protein of unknown function (DUF1573)
PAMMCEDC_02647 3.11e-109 - - - - - - - -
PAMMCEDC_02648 0.0 - - - S - - - COG2373 Large extracellular alpha-helical protein
PAMMCEDC_02649 0.0 - - - M - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_02650 2.44e-221 - - - S ko:K16922 - ko00000,ko01002 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_02651 0.0 - - - P - - - Psort location OuterMembrane, score
PAMMCEDC_02653 2.07e-120 - - - C ko:K06871 - ko00000 Psort location Cytoplasmic, score
PAMMCEDC_02654 0.0 - - - E - - - non supervised orthologous group
PAMMCEDC_02656 0.0 - - - S - - - Tetratricopeptide repeat
PAMMCEDC_02657 3.04e-105 guaD 3.5.4.3 - FJ ko:K01487 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000 Cytidine and deoxycytidylate deaminase zinc-binding region
PAMMCEDC_02658 0.0 pepD_2 - - E ko:K01270 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 Xaa-His dipeptidase
PAMMCEDC_02659 2.62e-238 - - - S ko:K07027 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_02660 2.42e-200 ksgA 2.1.1.182 - J ko:K02528 - ko00000,ko01000,ko03009 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PAMMCEDC_02661 5.12e-288 mgtE - - P ko:K06213 - ko00000,ko02000 Acts as a magnesium transporter
PAMMCEDC_02662 0.0 - - - A - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02664 3.66e-82 rsfS - - J ko:K09710 - ko00000,ko03009 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PAMMCEDC_02665 0.0 ftsH - - O ko:K03798 - ko00000,ko00002,ko01000,ko01002,ko03110 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PAMMCEDC_02666 5.28e-199 cdsA 2.7.7.41 - M ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 ko00000,ko00001,ko00002,ko01000 Belongs to the CDS family
PAMMCEDC_02667 9.07e-178 - - - S - - - NigD-like N-terminal OB domain
PAMMCEDC_02668 1.23e-277 lpxB 2.4.1.182 GT19 M ko:K00748 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PAMMCEDC_02669 5.95e-194 surE 3.1.3.5 - S ko:K03787 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
PAMMCEDC_02670 1.67e-174 soj - - D ko:K03496 - ko00000,ko03036,ko04812 CobQ CobB MinD ParA nucleotide binding domain
PAMMCEDC_02671 5.88e-201 parB - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
PAMMCEDC_02672 1.19e-171 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_02673 4.24e-308 mltD - - M ko:K08307 - ko00000,ko01000,ko01011 Transglycosylase SLT domain
PAMMCEDC_02674 0.0 relA 2.7.6.5 - KT ko:K00951 ko00230,map00230 ko00000,ko00001,ko01000 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PAMMCEDC_02675 2.84e-75 ycgE - - K - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02676 1.1e-233 - - - M - - - Peptidase, M23
PAMMCEDC_02677 0.0 alaS 6.1.1.7 - J ko:K01872 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PAMMCEDC_02678 0.0 recD2_2 3.1.11.5 - L ko:K01144 - ko00000,ko01000 COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member
PAMMCEDC_02679 1.9e-162 - - - S - - - COG NOG19144 non supervised orthologous group
PAMMCEDC_02680 2.25e-201 - - - S - - - Protein of unknown function (DUF3822)
PAMMCEDC_02681 1.38e-132 rsmD 2.1.1.171 - L ko:K08316 - ko00000,ko01000,ko03009 RNA methyltransferase, RsmD family
PAMMCEDC_02682 0.0 cls - - I ko:K06131 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PAMMCEDC_02683 0.0 - - - H - - - Psort location OuterMembrane, score
PAMMCEDC_02684 3.46e-94 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_02685 2.71e-261 aroB 4.2.3.4 - E ko:K01735 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PAMMCEDC_02686 2.53e-205 thiD 2.7.1.49, 2.7.4.7 - K ko:K00941 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 transcriptional regulator (AraC family)
PAMMCEDC_02688 3.74e-69 higA - - K ko:K21498 - ko00000,ko02048 addiction module antidote protein, HigA
PAMMCEDC_02689 2.63e-73 - - - S ko:K07334 - ko00000,ko02048 Plasmid maintenance system killer protein
PAMMCEDC_02690 1.28e-135 - - - - - - - -
PAMMCEDC_02691 4.41e-169 - - - L - - - Helix-turn-helix domain
PAMMCEDC_02692 1.26e-102 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_02693 1.17e-167 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_02695 0.0 - - - M - - - TonB-dependent receptor
PAMMCEDC_02696 0.0 - - - N - - - COG NOG06100 non supervised orthologous group
PAMMCEDC_02697 9.52e-240 manA 5.3.1.8 - G ko:K01809 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_02698 2.49e-277 pgl 3.1.1.31 - G ko:K07404 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 COG2706 3-carboxymuconate cyclase
PAMMCEDC_02700 0.0 fucA 3.2.1.51 GH29 G ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 Alpha-L-fucosidase
PAMMCEDC_02701 6.47e-285 cobW - - S - - - CobW P47K family protein
PAMMCEDC_02702 0.0 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PAMMCEDC_02703 0.0 - - - E ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_02704 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_02705 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_02706 0.0 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PAMMCEDC_02707 2.28e-118 - - - T - - - Histidine kinase
PAMMCEDC_02710 1.4e-265 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_02712 3.31e-43 - - - - - - - -
PAMMCEDC_02713 9.36e-44 - - - - - - - -
PAMMCEDC_02714 2.8e-96 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02715 3.25e-54 - - - S - - - Domain of unknown function (DUF4120)
PAMMCEDC_02716 5.08e-34 - - - - - - - -
PAMMCEDC_02718 1.33e-210 - - - L - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02719 8.91e-132 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02720 4.15e-195 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02721 1.94e-78 - - - - - - - -
PAMMCEDC_02722 2.33e-111 - - - L - - - DDE superfamily endonuclease
PAMMCEDC_02724 3.76e-47 - - - - - - - -
PAMMCEDC_02725 1.31e-87 - - - S - - - Domain of unknown function (DUF4121)
PAMMCEDC_02726 4.87e-135 - 2.1.1.72 - V ko:K03427 - ko00000,ko01000,ko02048 type I restriction enzyme
PAMMCEDC_02727 2.59e-243 - - - - - - - -
PAMMCEDC_02728 4.43e-105 - - - - - - - -
PAMMCEDC_02729 2.85e-86 - 3.2.1.17 - S ko:K01185 - ko00000,ko01000 lysozyme
PAMMCEDC_02730 2.2e-76 - - - S - - - COG NOG28378 non supervised orthologous group
PAMMCEDC_02731 2.13e-104 - - - S - - - Conjugative transposon protein TraO
PAMMCEDC_02732 8.6e-199 - - - U - - - Conjugative transposon TraN protein
PAMMCEDC_02733 7.49e-204 traM - - S - - - Conjugative transposon TraM protein
PAMMCEDC_02735 5.23e-136 - - - U - - - Conjugative transposon TraK protein
PAMMCEDC_02736 1.55e-210 traJ - - S - - - Conjugative transposon TraJ protein
PAMMCEDC_02737 1.27e-105 - - - U - - - COG NOG09946 non supervised orthologous group
PAMMCEDC_02738 2.61e-67 - - - S - - - COG NOG30362 non supervised orthologous group
PAMMCEDC_02739 0.0 - - - U - - - Conjugation system ATPase, TraG family
PAMMCEDC_02740 5.05e-59 - - - S - - - Domain of unknown function (DUF4133)
PAMMCEDC_02741 8.44e-59 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_02744 2.36e-107 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02745 2.01e-51 - - - S - - - Protein of unknown function (DUF3408)
PAMMCEDC_02746 3.52e-141 - - - D - - - COG NOG26689 non supervised orthologous group
PAMMCEDC_02749 5.43e-85 - - - S - - - COG NOG37914 non supervised orthologous group
PAMMCEDC_02750 1.5e-252 - - - U - - - Relaxase/Mobilisation nuclease domain
PAMMCEDC_02751 2.63e-255 - - - U - - - COG COG3505 Type IV secretory pathway, VirD4 components
PAMMCEDC_02752 0.0 - - - L - - - COG COG3344 Retron-type reverse transcriptase
PAMMCEDC_02753 1.35e-182 - - - U - - - COG COG3505 Type IV secretory pathway, VirD4 components
PAMMCEDC_02754 0.0 - - - S - - - Domain of unknown function (DUF4209)
PAMMCEDC_02755 2.19e-50 - - - - - - - -
PAMMCEDC_02756 1.73e-177 - - - - - - - -
PAMMCEDC_02757 1.75e-106 - - - - - - - -
PAMMCEDC_02758 2.65e-135 - - - S - - - Domain of unknown function (DUF1911)
PAMMCEDC_02759 7.43e-191 - - - - - - - -
PAMMCEDC_02760 0.0 - - - S - - - oxidoreductase activity
PAMMCEDC_02761 2.77e-196 - - - S - - - Pkd domain
PAMMCEDC_02762 1.34e-104 - - - S - - - Family of unknown function (DUF5469)
PAMMCEDC_02763 4.2e-88 - - - S - - - Family of unknown function (DUF5469)
PAMMCEDC_02764 2.97e-189 - - - S - - - Pfam:T6SS_VasB
PAMMCEDC_02765 1.88e-255 - - - S - - - type VI secretion protein
PAMMCEDC_02766 4.62e-179 - - - S - - - Family of unknown function (DUF5467)
PAMMCEDC_02767 3.2e-171 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02769 1.11e-239 - - - - - - - -
PAMMCEDC_02770 3.39e-253 - - - - - - - -
PAMMCEDC_02771 1.18e-66 - - - - - - - -
PAMMCEDC_02772 8.34e-277 - - - - - - - -
PAMMCEDC_02773 0.0 - - - S - - - Phage minor structural protein
PAMMCEDC_02774 3.4e-102 - - - - - - - -
PAMMCEDC_02775 0.0 - - - D - - - Psort location OuterMembrane, score
PAMMCEDC_02776 0.0 - - - - - - - -
PAMMCEDC_02777 9.91e-204 dam 2.1.1.72 - H ko:K06223 ko03430,map03430 ko00000,ko00001,ko01000,ko02048,ko03032,ko03400 COG0338 Site-specific DNA methylase
PAMMCEDC_02778 3.86e-112 - - - - - - - -
PAMMCEDC_02779 1.37e-103 - - - - - - - -
PAMMCEDC_02780 2.23e-187 - - - - - - - -
PAMMCEDC_02781 6.82e-223 - - - - - - - -
PAMMCEDC_02782 0.0 - - - - - - - -
PAMMCEDC_02783 3.74e-58 - - - - - - - -
PAMMCEDC_02785 1.84e-80 - - - - - - - -
PAMMCEDC_02786 3.85e-35 - - - - - - - -
PAMMCEDC_02789 1.12e-150 - - - L - - - D12 class N6 adenine-specific DNA methyltransferase
PAMMCEDC_02790 3.11e-139 thyA 2.1.1.45 - F ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PAMMCEDC_02791 1.22e-35 - - - - - - - -
PAMMCEDC_02792 0.0 - - - - - - - -
PAMMCEDC_02793 1.33e-152 - - - - - - - -
PAMMCEDC_02794 2.78e-71 - - - - - - - -
PAMMCEDC_02795 6.29e-179 - - - - - - - -
PAMMCEDC_02796 7.59e-11 - - - - - - - -
PAMMCEDC_02797 1.2e-36 - - - - - - - -
PAMMCEDC_02798 1.92e-196 - - - - - - - -
PAMMCEDC_02799 0.0 - - - - - - - -
PAMMCEDC_02800 4.37e-206 - - - OU ko:K04773 - ko00000,ko01000,ko01002 Peptidase family S49
PAMMCEDC_02801 1.18e-114 - - - - - - - -
PAMMCEDC_02803 3.29e-73 - - - - - - - -
PAMMCEDC_02804 1.52e-67 - - - - - - - -
PAMMCEDC_02805 0.0 - - - L - - - DNA primase
PAMMCEDC_02808 5.03e-43 - - - - - - - -
PAMMCEDC_02810 4.58e-223 - - - L - - - DNA restriction-modification system
PAMMCEDC_02811 7.84e-264 - - - L - - - Phage integrase, N-terminal SAM-like domain
PAMMCEDC_02814 3.74e-48 - - - - - - - -
PAMMCEDC_02815 3.15e-78 - - - - - - - -
PAMMCEDC_02816 0.0 - - - L - - - Site-specific recombinase, DNA invertase Pin
PAMMCEDC_02818 3.66e-131 - - - L - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02819 1.44e-311 - - - S ko:K07133 - ko00000 Domain of unknown function (DUF4143)
PAMMCEDC_02821 0.0 - - - S - - - Tetratricopeptide repeat
PAMMCEDC_02822 0.0 - - - V ko:K06147 - ko00000,ko02000 COG1132 ABC-type multidrug transport system, ATPase and permease components
PAMMCEDC_02823 2.95e-146 - - - Q - - - ubiE/COQ5 methyltransferase family
PAMMCEDC_02824 0.0 - - - V ko:K06147 - ko00000,ko02000 COG1132 ABC-type multidrug transport system, ATPase and permease components
PAMMCEDC_02825 7.26e-203 tcmP - - Q - - - COG3315 O-Methyltransferase involved in polyketide biosynthesis
PAMMCEDC_02826 4.54e-144 - - - K - - - Bacterial regulatory proteins, tetR family
PAMMCEDC_02827 9.32e-95 - - - - - - - -
PAMMCEDC_02828 5.64e-278 - - - - - - - -
PAMMCEDC_02829 3.85e-87 - - - - - - - -
PAMMCEDC_02831 2.13e-97 - - - L ko:K02315 - ko00000,ko03032 DNA-dependent DNA replication
PAMMCEDC_02832 5.58e-162 - - - L - - - DnaD domain protein
PAMMCEDC_02833 1.48e-49 - - - K - - - Helix-turn-helix domain
PAMMCEDC_02834 1.31e-141 - - - - - - - -
PAMMCEDC_02835 7.3e-276 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_02836 4.62e-267 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_02839 6.68e-16 - - - - - - - -
PAMMCEDC_02840 3.84e-72 - - - S - - - KR domain
PAMMCEDC_02843 6.14e-89 - - - K - - - Transcriptional regulator
PAMMCEDC_02845 7.74e-278 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_02846 7.38e-261 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_02847 5.16e-68 - - - S - - - Helix-turn-helix domain
PAMMCEDC_02848 1.4e-80 - - - K - - - Helix-turn-helix domain
PAMMCEDC_02850 1.81e-128 - - - K - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02851 4.02e-99 - - - - - - - -
PAMMCEDC_02852 2.77e-109 - - - S - - - Protein of unknown function (DUF3408)
PAMMCEDC_02853 4.85e-314 - - - T ko:K07713 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Psort location Cytoplasmic, score
PAMMCEDC_02854 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_02855 9.32e-182 tatC - - U ko:K03118 ko03060,ko03070,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PAMMCEDC_02857 0.0 - 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Glycoside hydrolase, family 3
PAMMCEDC_02858 0.0 - 3.1.1.53 - G ko:K05970 - ko00000,ko01000 COG NOG04984 non supervised orthologous group
PAMMCEDC_02859 1.76e-302 bfce 5.1.3.11 - G ko:K16213 - ko00000,ko01000 Catalyzes the reversible epimerization of cellobiose to 4-O-beta-D-glucopyranosyl-D-mannose (Glc-Man)
PAMMCEDC_02860 0.0 yicJ_1 - - G ko:K03292 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_02861 2.2e-297 - 2.4.1.281 - G ko:K16212 - ko00000,ko01000 Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
PAMMCEDC_02862 3.81e-281 - 3.2.1.78 GH26 G ko:K01218,ko:K19355 ko00051,ko02024,map00051,map02024 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 26 family
PAMMCEDC_02863 2.36e-292 - - - - - - - -
PAMMCEDC_02864 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_02865 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_02866 0.0 - - - Q - - - COG3458 Acetyl esterase (deacetylase)
PAMMCEDC_02867 0.0 - 3.2.1.78 - G ko:K19355 ko00051,map00051 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 5 (cellulase A) family
PAMMCEDC_02868 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_02869 5.36e-213 - - - L - - - Phage integrase SAM-like domain
PAMMCEDC_02870 2.75e-217 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_02871 0.0 dnaK - - O ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Heat shock 70 kDa protein
PAMMCEDC_02872 1.19e-187 - - - O - - - META domain
PAMMCEDC_02873 7.05e-310 - - - - - - - -
PAMMCEDC_02874 7.78e-306 LYS1 1.5.1.7 - E ko:K00290 ko00300,ko00310,ko01100,ko01110,ko01130,ko01230,map00300,map00310,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 COG1748 Saccharopine dehydrogenase and related
PAMMCEDC_02875 2.09e-104 bcp 1.11.1.15 - O ko:K03564 - ko00000,ko01000 bacterioferritin comigratory protein
PAMMCEDC_02876 3.89e-242 recA - - L ko:K03553 ko03440,map03440 ko00000,ko00001,ko00002,ko03400 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PAMMCEDC_02877 4.37e-135 - - - S - - - COG NOG28221 non supervised orthologous group
PAMMCEDC_02878 0.0 - - - M ko:K21572 - ko00000,ko02000 Pfam:SusD
PAMMCEDC_02879 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_02880 5.76e-206 - - - G - - - Glycosyl hydrolase family 16
PAMMCEDC_02881 0.0 - - - KT - - - helix_turn_helix, arabinose operon control protein
PAMMCEDC_02882 4.34e-200 nadC 2.4.2.19 - H ko:K00767 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NadC ModD family
PAMMCEDC_02883 4.47e-108 rlmH 2.1.1.177 - J ko:K00783 - ko00000,ko01000,ko03009 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PAMMCEDC_02884 1.92e-250 - - - S - - - Endonuclease Exonuclease phosphatase family
PAMMCEDC_02885 0.0 pepD_1 - - E ko:K01270 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 Psort location Cytoplasmic, score 8.96
PAMMCEDC_02886 1.37e-41 - - - S - - - COG NOG35566 non supervised orthologous group
PAMMCEDC_02887 5.88e-131 - - - M ko:K06142 - ko00000 membrane
PAMMCEDC_02888 4.55e-64 - - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Psort location Cytoplasmic, score
PAMMCEDC_02889 1.03e-106 - - - O - - - Thioredoxin-like domain
PAMMCEDC_02890 2.8e-135 rbr3A - - C - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02891 2.14e-100 fur - - P ko:K03711,ko:K09825 - ko00000,ko03000 Belongs to the Fur family
PAMMCEDC_02892 0.0 nadE 6.3.5.1 - H ko:K01950 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PAMMCEDC_02893 1.1e-281 hisB 3.1.3.15, 4.2.1.19 - E ko:K01089,ko:K01693 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Histidine biosynthesis bifunctional protein HisB
PAMMCEDC_02894 2.91e-257 hisC 2.6.1.9 - E ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PAMMCEDC_02895 7.78e-298 hisD 1.1.1.23 - E ko:K00013 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PAMMCEDC_02896 1.82e-192 hisG 2.4.2.17 - F ko:K00765 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 ATP phosphoribosyltransferase
PAMMCEDC_02897 4.43e-120 - - - Q - - - Thioesterase superfamily
PAMMCEDC_02898 1.46e-65 - - - S - - - Stress responsive A B barrel domain protein
PAMMCEDC_02899 5.53e-145 udk 2.7.1.48 - F ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PAMMCEDC_02900 0.0 mltF - - M ko:K18691 - ko00000,ko01000,ko01011 soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein
PAMMCEDC_02901 1.85e-22 - - - S - - - Predicted AAA-ATPase
PAMMCEDC_02903 4.57e-304 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_02904 0.0 - - - T ko:K02481 - ko00000,ko02022 acetoacetate metabolism regulatory protein AtoC K07714
PAMMCEDC_02905 0.0 - - - MU - - - Psort location OuterMembrane, score
PAMMCEDC_02906 7.58e-308 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
PAMMCEDC_02907 3.42e-297 - - - V - - - MacB-like periplasmic core domain
PAMMCEDC_02908 2.28e-309 - - - V ko:K02004 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score
PAMMCEDC_02909 1.29e-296 - - - V ko:K02004 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_02910 2.34e-303 - - - V ko:K02004 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score
PAMMCEDC_02911 4.04e-302 - - - V ko:K02004 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_02912 4.3e-314 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
PAMMCEDC_02913 4.42e-308 - - - V ko:K02004 - ko00000,ko00002,ko02000 COG0577 ABC-type antimicrobial peptide transport system permease component
PAMMCEDC_02914 2.9e-150 ytrE_3 - - V ko:K02003 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 7.88
PAMMCEDC_02915 2.33e-282 - - - M ko:K02005 - ko00000 Efflux transporter, RND family, MFP subunit
PAMMCEDC_02916 4.29e-226 lytG - - MNU - - - COG1705 Muramidase (flagellum-specific)
PAMMCEDC_02917 1.65e-160 - - - T - - - COG NOG17272 non supervised orthologous group
PAMMCEDC_02918 2.67e-119 - - - - - - - -
PAMMCEDC_02919 2.12e-77 - - - - - - - -
PAMMCEDC_02920 4.49e-125 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PAMMCEDC_02921 1.69e-158 - - - J - - - Domain of unknown function (DUF4476)
PAMMCEDC_02922 1.25e-141 - - - J - - - Domain of unknown function (DUF4476)
PAMMCEDC_02923 4.7e-68 - - - S - - - Belongs to the UPF0145 family
PAMMCEDC_02924 2.34e-111 cdd 3.5.4.5 - F ko:K01489 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
PAMMCEDC_02925 0.0 - - - E - - - GDSL-like Lipase/Acylhydrolase family
PAMMCEDC_02926 0.0 - - - S - - - COG COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PAMMCEDC_02927 1.87e-101 grpE - - O ko:K03687 - ko00000,ko03029,ko03110 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PAMMCEDC_02928 5.35e-253 dnaJ - - O ko:K03686 - ko00000,ko03029,ko03110 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PAMMCEDC_02929 2.58e-313 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Folylpolyglutamate synthase
PAMMCEDC_02930 1.81e-276 galM 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Converts alpha-aldose to the beta-anomer
PAMMCEDC_02931 0.0 gluP - - G ko:K02429 - ko00000,ko02000 Transporter, major facilitator family protein
PAMMCEDC_02932 2.94e-283 galK 2.7.1.6 - H ko:K00849 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GHMP kinase family. GalK subfamily
PAMMCEDC_02933 1.4e-284 galM 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Converts alpha-aldose to the beta-anomer
PAMMCEDC_02934 0.0 - - - S ko:K03307 - ko00000 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PAMMCEDC_02935 1.29e-163 - - - F - - - Hydrolase, NUDIX family
PAMMCEDC_02936 1.11e-180 araD 5.1.3.4 - G ko:K03077 ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120 ko00000,ko00001,ko00002,ko01000 COG COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
PAMMCEDC_02937 0.0 araA 5.3.1.4 - G ko:K01804 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of L-arabinose to L-ribulose
PAMMCEDC_02938 0.0 araB - - G - - - Carbohydrate kinase, FGGY family protein
PAMMCEDC_02939 0.0 tkt 2.2.1.1 - H ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the transketolase family
PAMMCEDC_02940 3.25e-106 rpiB 5.3.1.6 - G ko:K01808 ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Ribose 5-phosphate isomerase
PAMMCEDC_02941 1.07e-264 - - - S ko:K03646 - ko00000,ko02000 Domain of unknown function (DUF4468) with TBP-like fold
PAMMCEDC_02943 4.55e-64 - - - O - - - Tetratricopeptide repeat
PAMMCEDC_02944 9.96e-40 oorD 1.2.7.3 - C ko:K00176 ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200 br01601,ko00000,ko00001,ko00002,ko01000 4Fe-4S binding domain protein
PAMMCEDC_02945 1.68e-254 vorB 1.2.7.11, 1.2.7.3 - C ko:K00174 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 COG0674 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin
PAMMCEDC_02946 1.06e-25 - - - - - - - -
PAMMCEDC_02947 4.35e-190 vorA 1.2.7.11, 1.2.7.3 - C ko:K00175 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
PAMMCEDC_02948 1.5e-124 porG 1.2.7.3 - C ko:K00177 ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200 br01601,ko00000,ko00001,ko00002,ko01000 2-oxoacid ferredoxin flavodoxin oxidoreductase, gamma subunit
PAMMCEDC_02949 0.0 - - - H - - - COG NOG07963 non supervised orthologous group
PAMMCEDC_02950 1.91e-193 - - - ET - - - COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain
PAMMCEDC_02951 1.95e-251 - - - S - - - Oxidoreductase, NAD-binding domain protein
PAMMCEDC_02952 4.66e-280 - - - N - - - Psort location OuterMembrane, score
PAMMCEDC_02954 3.26e-198 - - - S - - - PD-(D/E)XK nuclease family transposase
PAMMCEDC_02955 0.0 - - - I - - - Psort location OuterMembrane, score
PAMMCEDC_02956 4.88e-190 - - - S - - - Psort location OuterMembrane, score
PAMMCEDC_02957 5.73e-149 - - - L - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02959 0.0 - - - S - - - P-loop ATPase and inactivated derivatives
PAMMCEDC_02960 2.33e-56 - - - CO - - - Glutaredoxin
PAMMCEDC_02961 5.33e-209 prmA - - J ko:K02687 - ko00000,ko01000,ko03009 Methylates ribosomal protein L11
PAMMCEDC_02962 4.58e-82 yccF - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_02963 4.07e-212 acm - - M ko:K07273 - ko00000 phage tail component domain protein
PAMMCEDC_02964 0.0 pfp 2.7.1.11, 2.7.1.90 - H ko:K00895,ko:K21071 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions
PAMMCEDC_02965 1.06e-48 - - - S - - - COG NOG23371 non supervised orthologous group
PAMMCEDC_02966 4.13e-138 - - - I - - - Acyltransferase
PAMMCEDC_02967 0.0 glaB - - M - - - Alpha-galactosidase. Removes both branched alpha-1,3- linked galactose residues of blood group B antigens and linear alpha-1,3-linked galactose structures
PAMMCEDC_02968 0.0 xly - - M - - - fibronectin type III domain protein
PAMMCEDC_02969 5.09e-69 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02970 0.0 - - - C - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02971 1.16e-69 - - - L ko:K07484 - ko00000 COG COG3436 Transposase and inactivated derivatives
PAMMCEDC_02972 8.53e-95 - - - - - - - -
PAMMCEDC_02974 2.16e-231 - - - L - - - Integrase core domain
PAMMCEDC_02975 1.17e-152 - - - L - - - IstB-like ATP binding protein
PAMMCEDC_02976 7.49e-181 - - - S - - - Domain of unknown function (DUF4373)
PAMMCEDC_02978 4.58e-66 - - - L - - - PFAM Integrase catalytic
PAMMCEDC_02979 1.57e-190 spoU - - H ko:K03437 - ko00000,ko03016 RNA methyltransferase TrmH family
PAMMCEDC_02980 3.04e-260 yjmD_2 - - E ko:K18369 ko00640,map00640 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PAMMCEDC_02981 1.66e-97 hsp20 - - O ko:K13993 ko04141,map04141 ko00000,ko00001,ko03110 Belongs to the small heat shock protein (HSP20) family
PAMMCEDC_02982 3.27e-83 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PAMMCEDC_02983 1.6e-215 - - - IQ - - - Oxidoreductase, short chain dehydrogenase reductase family protein
PAMMCEDC_02984 1.34e-234 gloA 4.4.1.5 - E ko:K01759,ko:K03827 ko00620,map00620 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PAMMCEDC_02985 1.4e-105 nodN - - I - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02986 1.44e-42 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02987 3.96e-46 ogt 2.1.1.63 - L ko:K00567,ko:K07443 - ko00000,ko01000,ko03400 6-O-methylguanine DNA methyltransferase, DNA binding domain
PAMMCEDC_02988 1.06e-115 - 1.20.4.1 - T ko:K03741 - ko00000,ko01000 Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PAMMCEDC_02989 3.04e-128 - - - E - - - GDSL-like Lipase/Acylhydrolase
PAMMCEDC_02990 1.5e-44 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_02991 0.0 - - - KL - - - Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
PAMMCEDC_02992 0.0 rluA 5.4.99.28, 5.4.99.29 - J ko:K06177 - ko00000,ko01000,ko03009,ko03016 Pseudouridine synthase, RluA family
PAMMCEDC_02993 0.0 mepA_7 - - V - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_02994 0.0 trkH - - P ko:K03498 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_02995 8.55e-270 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMMCEDC_02996 0.0 - - - V - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMMCEDC_02997 0.0 - - - M ko:K18139,ko:K18300 ko01501,ko02024,map01501,map02024 ko00000,ko00001,ko00002,ko01504,ko02000 Efflux transporter, outer membrane factor lipoprotein, NodT family
PAMMCEDC_02998 2.34e-45 - - - S - - - Psort location Cytoplasmic, score
PAMMCEDC_02999 3.15e-225 - - - S - - - Psort location Cytoplasmic, score
PAMMCEDC_03000 1.67e-293 - - - S ko:K07133 - ko00000 ATPase (AAA superfamily)
PAMMCEDC_03001 0.0 nifJ 1.2.7.1 - C ko:K03737 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
PAMMCEDC_03003 0.0 - - - P - - - Type I phosphodiesterase / nucleotide pyrophosphatase
PAMMCEDC_03005 6.92e-189 - - - S - - - Outer membrane protein beta-barrel domain
PAMMCEDC_03006 1.88e-291 - - - - - - - -
PAMMCEDC_03007 0.0 opuAC - - S ko:K02002 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 dextransucrase activity
PAMMCEDC_03008 1.27e-222 - - - - - - - -
PAMMCEDC_03009 1.27e-220 - - - - - - - -
PAMMCEDC_03010 1.81e-109 - - - - - - - -
PAMMCEDC_03012 1.12e-109 - - - - - - - -
PAMMCEDC_03014 5.46e-184 - - - T ko:K02477 - ko00000,ko02022 COG3279 Response regulator of the LytR AlgR family
PAMMCEDC_03015 0.0 - - - T - - - Tetratricopeptide repeat protein
PAMMCEDC_03016 9.72e-226 lacX - - G - - - COG COG2017 Galactose mutarotase and related enzymes
PAMMCEDC_03017 5.97e-225 - - - EG ko:K08978 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03018 0.0 pgcA 5.4.2.2 - G ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain II
PAMMCEDC_03019 0.0 - - - M - - - Dipeptidase
PAMMCEDC_03020 0.0 - - - M - - - Peptidase, M23 family
PAMMCEDC_03021 1.3e-264 ald 1.4.1.1 - C ko:K00259 ko00250,ko00430,ko01100,map00250,map00430,map01100 ko00000,ko00001,ko01000 Belongs to the AlaDH PNT family
PAMMCEDC_03022 7.98e-188 tatC - - U ko:K03118 ko03060,ko03070,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PAMMCEDC_03023 8.52e-37 tatA - - U ko:K03116 ko03060,ko03070,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
PAMMCEDC_03025 2.53e-113 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PAMMCEDC_03026 1.04e-103 - - - - - - - -
PAMMCEDC_03027 3.67e-293 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03028 3.5e-224 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03029 1.08e-212 cysL - - K - - - LysR substrate binding domain protein
PAMMCEDC_03030 4.75e-132 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_03031 0.0 clpB - - O ko:K03695 ko04213,map04213 ko00000,ko00001,ko03110 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PAMMCEDC_03032 6.26e-96 - - - S - - - COG NOG14473 non supervised orthologous group
PAMMCEDC_03033 1.03e-133 coaE 2.7.1.24 - H ko:K00859 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PAMMCEDC_03034 1.2e-240 - - - S - - - COG NOG14472 non supervised orthologous group
PAMMCEDC_03035 8.58e-65 yajC - - U ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 COG1862 Preprotein translocase subunit YajC
PAMMCEDC_03036 3.47e-214 nusB - - K ko:K03625 - ko00000,ko03009,ko03021 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PAMMCEDC_03037 4.68e-82 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_03038 3.07e-135 ctc - - J ko:K02897 ko03010,map03010 ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PAMMCEDC_03039 4.44e-134 pth 3.1.1.29 - J ko:K01056 - ko00000,ko01000,ko03012 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PAMMCEDC_03040 9e-94 hslR - - J ko:K04762 - ko00000,ko03110 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
PAMMCEDC_03041 6.87e-102 - - - FG - - - Histidine triad domain protein
PAMMCEDC_03042 0.0 nhaA - - P ko:K03455 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03043 7e-268 gcvT 2.1.2.10 - H ko:K00605 ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200 ko00000,ko00001,ko00002,ko01000 The glycine cleavage system catalyzes the degradation of glycine
PAMMCEDC_03044 2.93e-301 pepT 3.4.11.4 - E ko:K01258 - ko00000,ko01000,ko01002 Cleaves the N-terminal amino acid of tripeptides
PAMMCEDC_03045 0.0 purF 2.4.2.14 - F ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 glutamine phosphoribosylpyrophosphate amidotransferase
PAMMCEDC_03046 1.24e-82 crcB - - D ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PAMMCEDC_03047 1.06e-184 - - - S - - - NigD-like N-terminal OB domain
PAMMCEDC_03048 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_03049 3.58e-142 - - - I - - - PAP2 family
PAMMCEDC_03050 0.0 - 3.1.1.53 - G ko:K05970 - ko00000,ko01000 Pfam:DUF303
PAMMCEDC_03051 5.7e-196 - 2.7.1.33 - H ko:K09680 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Pantothenate kinase
PAMMCEDC_03052 5.02e-136 - - - L - - - IstB-like ATP binding protein
PAMMCEDC_03053 0.0 - - - S - - - Leucine-rich repeat (LRR) protein
PAMMCEDC_03054 7.37e-222 - - - K - - - Helix-turn-helix domain
PAMMCEDC_03055 0.0 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PAMMCEDC_03056 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_03057 2.61e-308 - - - GM ko:K21572 - ko00000,ko02000 Pfam:SusD
PAMMCEDC_03058 2.9e-78 - - - GM ko:K21572 - ko00000,ko02000 Pfam:SusD
PAMMCEDC_03059 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PAMMCEDC_03060 0.0 - - - T - - - Y_Y_Y domain
PAMMCEDC_03061 1.47e-210 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03062 1.63e-67 - - - - - - - -
PAMMCEDC_03063 1.19e-102 - - - S - - - Calycin-like beta-barrel domain
PAMMCEDC_03064 2.82e-160 - - - S - - - HmuY protein
PAMMCEDC_03065 0.0 hmuR - - P ko:K16089 - ko00000,ko02000 COG4771 Outer membrane receptor for ferrienterochelin and colicins
PAMMCEDC_03066 0.0 cobN 6.6.1.2 - H ko:K02230 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko01000 COG1429 Cobalamin biosynthesis protein CobN and related
PAMMCEDC_03067 1.76e-145 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03068 1.77e-130 - - - U - - - Psort location CytoplasmicMembrane, score 9.46
PAMMCEDC_03069 2.31e-69 - - - S - - - Conserved protein
PAMMCEDC_03070 8.28e-225 - - - - - - - -
PAMMCEDC_03071 1.33e-228 - - - - - - - -
PAMMCEDC_03072 0.0 - - - - - - - -
PAMMCEDC_03073 0.0 - - - - - - - -
PAMMCEDC_03074 1.01e-145 - - - M - - - Protein of unknown function (DUF3575)
PAMMCEDC_03075 0.0 - - - M - - - COG NOG23378 non supervised orthologous group
PAMMCEDC_03076 0.0 - - - S - - - COG NOG34047 non supervised orthologous group
PAMMCEDC_03077 2.25e-240 - - - S - - - COG NOG32009 non supervised orthologous group
PAMMCEDC_03078 0.0 - - - G - - - Domain of unknown function (DUF4091)
PAMMCEDC_03079 5.54e-243 - - - CO - - - Redoxin
PAMMCEDC_03080 9.32e-255 - - - U - - - Sodium:dicarboxylate symporter family
PAMMCEDC_03081 0.0 - - - S - - - COG NOG26858 non supervised orthologous group
PAMMCEDC_03082 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_03083 2.37e-221 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PAMMCEDC_03084 8.7e-297 pgk 2.7.2.3 - F ko:K00927 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Psort location Cytoplasmic, score
PAMMCEDC_03085 1.11e-304 - - - - - - - -
PAMMCEDC_03086 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
PAMMCEDC_03087 1.12e-265 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03088 3.5e-126 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PAMMCEDC_03089 0.0 - - - I ko:K06076 - ko00000,ko02000 COG COG2067 Long-chain fatty acid transport protein
PAMMCEDC_03091 1.7e-299 - - - V - - - MATE efflux family protein
PAMMCEDC_03092 1.6e-304 ffh 3.6.5.4 - U ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko01000,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PAMMCEDC_03093 1.58e-207 folD 1.5.1.5, 3.5.4.9 - F ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PAMMCEDC_03094 3.87e-263 - - - M ko:K07282 - ko00000 Bacterial capsule synthesis protein
PAMMCEDC_03096 3.91e-124 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PAMMCEDC_03097 1.82e-253 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PAMMCEDC_03098 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_03099 0.0 - - - S ko:K21572 - ko00000,ko02000 Pfam:SusD
PAMMCEDC_03100 0.0 - - - CO - - - Thioredoxin
PAMMCEDC_03101 5.13e-288 - - - CO - - - Domain of unknown function (DUF4369)
PAMMCEDC_03102 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PAMMCEDC_03103 1.92e-289 mro_1 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Converts alpha-aldose to the beta-anomer
PAMMCEDC_03104 1.59e-258 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_03105 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_03106 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_03107 0.0 - - - GM ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_03108 0.0 - - - G - - - Glycosyl hydrolases family 43
PAMMCEDC_03109 1.04e-247 - - - G - - - Belongs to the glycosyl hydrolase 43 family
PAMMCEDC_03110 5.43e-260 - 3.2.1.99 GH43 G ko:K06113 - ko00000,ko01000 hydrolase, family 43
PAMMCEDC_03111 0.0 - - - O - - - COG NOG25094 non supervised orthologous group
PAMMCEDC_03113 1.85e-239 pabB 2.6.1.85 - EH ko:K01665 ko00790,map00790 ko00000,ko00001,ko01000 COG COG0147 Anthranilate para-aminobenzoate synthases component I
PAMMCEDC_03114 2.45e-145 - 4.1.3.38 - EH ko:K02619 ko00790,map00790 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_03115 1.89e-277 - - - S - - - COG NOG25407 non supervised orthologous group
PAMMCEDC_03116 1.17e-287 - - - EGP - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03117 1.36e-245 pheS 6.1.1.20 - J ko:K01889 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PAMMCEDC_03118 1.93e-209 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_03119 3.76e-244 murB 1.3.1.98 - M ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation
PAMMCEDC_03120 7.82e-195 lipB 3.1.4.55 - S ko:K06167 ko00440,map00440 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_03121 1.99e-154 nth 4.2.99.18 - L ko:K10773 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PAMMCEDC_03122 2.92e-230 - - - E - - - Amidinotransferase
PAMMCEDC_03123 1.88e-220 - - - S - - - Amidinotransferase
PAMMCEDC_03124 9.93e-307 rocD 2.6.1.13 - H ko:K00819 ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130 ko00000,ko00001,ko01000,ko01007 Aminotransferase class-III
PAMMCEDC_03125 1.61e-154 yhhQ - - S ko:K09125 - ko00000 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
PAMMCEDC_03126 1.11e-163 queC 6.3.4.20 - F ko:K06920 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko01000,ko03016 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
PAMMCEDC_03127 1.85e-113 queF 1.7.1.13 - H ko:K09457 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko01000,ko03016 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
PAMMCEDC_03129 9.88e-205 - - - E ko:K08717 - ko00000,ko02000 urea transporter
PAMMCEDC_03130 0.0 dnaX 2.7.7.7 - H ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PAMMCEDC_03131 7.02e-59 - - - D - - - Septum formation initiator
PAMMCEDC_03132 5.77e-68 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_03133 0.0 - - - S - - - COG NOG06390 non supervised orthologous group
PAMMCEDC_03134 0.0 dpp11 - - E - - - COG NOG04781 non supervised orthologous group
PAMMCEDC_03135 4.28e-153 - - - S - - - COG NOG27017 non supervised orthologous group
PAMMCEDC_03136 1.57e-182 plsC 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
PAMMCEDC_03137 2.82e-282 - - - S ko:K07098 - ko00000 Ser Thr phosphatase family protein
PAMMCEDC_03138 1.08e-215 metH_2 - - E - - - Vitamin B12 dependent methionine synthase, activation domain
PAMMCEDC_03139 0.0 pyrC 3.5.2.3 - F ko:K01465 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PAMMCEDC_03140 3.05e-183 dpm1 2.4.1.83 GT2 S ko:K00721 ko00510,ko01100,map00510,map01100 ko00000,ko00001,ko01000,ko01003 b-glycosyltransferase, glycosyltransferase family 2 protein
PAMMCEDC_03141 1.65e-153 - - - M - - - COG NOG27406 non supervised orthologous group
PAMMCEDC_03142 2.13e-142 - - - S - - - Domain of unknown function (DUF4136)
PAMMCEDC_03143 2.1e-104 - - - MP ko:K06079 ko01503,map01503 ko00000,ko00001 COG NOG29769 non supervised orthologous group
PAMMCEDC_03144 0.0 - - - M - - - peptidase S41
PAMMCEDC_03145 0.0 aspD 4.1.1.12 - E ko:K09758 ko00250,ko00270,ko01100,ko01230,map00250,map00270,map01100,map01230 ko00000,ko00001,ko01000 COG COG0436 Aspartate tyrosine aromatic aminotransferase
PAMMCEDC_03146 0.0 aspT - - S ko:K07085 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03147 3.87e-198 - - - - - - - -
PAMMCEDC_03148 0.0 - - - S - - - Tetratricopeptide repeat protein
PAMMCEDC_03149 3.23e-292 - - - S ko:K07148 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03150 0.0 mfd - - L ko:K03723 ko03420,map03420 ko00000,ko00001,ko01000,ko03400 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PAMMCEDC_03151 1.25e-142 - - - M ko:K03832 - ko00000,ko02000 Gram-negative bacterial TonB protein C-terminal
PAMMCEDC_03153 5.5e-200 - - - - - - - -
PAMMCEDC_03154 1.42e-72 - - - S - - - Nucleotidyltransferase domain
PAMMCEDC_03155 1.07e-43 - - - - - - - -
PAMMCEDC_03156 4.76e-40 - - - S - - - Transposase IS66 family
PAMMCEDC_03157 2.5e-183 kdsA 2.5.1.55 - H ko:K01627 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Belongs to the KdsA family
PAMMCEDC_03158 3.38e-225 kdsD 5.3.1.13 - M ko:K06041 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 sugar phosphate isomerase involved in capsule formation
PAMMCEDC_03159 6.72e-316 - 2.7.7.43 - M ko:K00983 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Cytidylyltransferase
PAMMCEDC_03160 0.0 - - - S - - - Polysaccharide biosynthesis protein
PAMMCEDC_03161 4.64e-30 - - - - - - - -
PAMMCEDC_03162 1.3e-46 - - - - - - - -
PAMMCEDC_03163 5.16e-217 - - - - - - - -
PAMMCEDC_03164 2.58e-65 - - - - - - - -
PAMMCEDC_03165 5.08e-102 - - - V - - - N-acetylmuramoyl-L-alanine amidase
PAMMCEDC_03166 9.35e-101 - - - L - - - DNA-binding domain
PAMMCEDC_03167 2.75e-54 - - - S - - - Domain of unknown function (DUF4248)
PAMMCEDC_03168 0.0 - 3.6.4.12 - L ko:K17680 - ko00000,ko01000,ko03029 Psort location Cytoplasmic, score 8.96
PAMMCEDC_03169 6.86e-256 - - - - - - - -
PAMMCEDC_03174 6.21e-199 - - - M - - - Glycosyltransferase sugar-binding region containing DXD motif
PAMMCEDC_03175 2.6e-187 - - - S - - - Glycosyl transferase family 2
PAMMCEDC_03177 1.47e-268 - - - M - - - Glycosyltransferase, group 1 family protein
PAMMCEDC_03178 4.25e-18 - - - M - - - Glycosyl transferase 4-like
PAMMCEDC_03179 4.24e-271 - - GT4 M ko:K13004 - ko00000,ko01000,ko01003,ko01005 Glycosyltransferase, group 1 family protein
PAMMCEDC_03180 0.0 nhaS3 - - P - - - Sodium/hydrogen exchanger family
PAMMCEDC_03181 3.4e-255 dinB 2.7.7.7 - L ko:K02346 - ko00000,ko01000,ko03400 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PAMMCEDC_03182 1.44e-185 - - - O - - - ADP-ribosylglycohydrolase
PAMMCEDC_03183 3.17e-187 gpmA 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PAMMCEDC_03184 6.89e-258 fbaB 4.1.2.13 - G ko:K11645 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 COG COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes
PAMMCEDC_03185 8.66e-295 aroA 2.5.1.19 - E ko:K00800 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PAMMCEDC_03186 1.98e-91 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_03187 4.46e-193 znuB - - P ko:K02075,ko:K09816 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC 3 transport family
PAMMCEDC_03188 6.16e-96 yjeE - - S ko:K06925 - ko00000,ko03016 Psort location Cytoplasmic, score
PAMMCEDC_03189 3.14e-41 - - - S - - - COG NOG34862 non supervised orthologous group
PAMMCEDC_03190 0.0 - - - K - - - Plasmid pRiA4b ORF-3-like protein
PAMMCEDC_03191 5.18e-76 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_03192 1.94e-70 trxA - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Belongs to the thioredoxin family
PAMMCEDC_03193 0.0 dnaE 2.7.7.7 - L ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III alpha subunit
PAMMCEDC_03194 2.7e-162 psd 4.1.1.65 - I ko:K01613 ko00564,ko01100,ko01110,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)
PAMMCEDC_03195 1.09e-160 pssA 2.7.8.8 - I ko:K17103 ko00260,ko00564,ko01100,ko01110,map00260,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PAMMCEDC_03196 1.05e-35 - - - S - - - Domain of unknown function (DUF4834)
PAMMCEDC_03197 7.09e-101 tadA 3.5.4.33 - FJ ko:K11991 - ko00000,ko01000,ko03016 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PAMMCEDC_03198 2.45e-58 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_03199 1.8e-83 - - - L ko:K07460 - ko00000 Belongs to the UPF0102 family
PAMMCEDC_03200 1.75e-84 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_03201 4.85e-183 birA 6.3.4.15 - H ko:K03524 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko01000,ko03000 biotin acetyl-CoA-carboxylase ligase
PAMMCEDC_03202 0.0 - - - M - - - peptidase S41
PAMMCEDC_03203 4.05e-310 dinF - - V ko:K03327 - ko00000,ko02000 MATE efflux family protein
PAMMCEDC_03204 7.4e-164 pyrH 2.7.4.22 - F ko:K09903 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphorylation of UMP to UDP
PAMMCEDC_03205 0.0 - 3.2.1.172 GH105 E ko:K15532 - ko00000,ko01000 unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
PAMMCEDC_03206 0.0 - - - G - - - COG NOG26513 non supervised orthologous group
PAMMCEDC_03207 0.0 - - - G - - - Domain of unknown function (DUF4450)
PAMMCEDC_03208 1.52e-120 - 5.4.2.12 - G ko:K15634,ko:K15640 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Phosphoglycerate mutase family
PAMMCEDC_03209 2.37e-124 frr - - J ko:K02838 - ko00000,ko03012 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PAMMCEDC_03211 1.62e-229 rsgA 3.1.3.100 - S ko:K06949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PAMMCEDC_03212 8.05e-261 - - - M - - - Peptidase, M28 family
PAMMCEDC_03213 7.32e-248 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMMCEDC_03214 0.0 bepE_4 - - V ko:K03296,ko:K18138 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMMCEDC_03215 4.81e-310 tolC - - MU - - - Psort location OuterMembrane, score
PAMMCEDC_03216 0.0 - - - E ko:K03294 - ko00000 Amino acid permease
PAMMCEDC_03217 0.0 - 3.2.1.50 - G ko:K01205 ko00531,ko01100,ko04142,map00531,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko04147 Alpha-N-acetylglucosaminidase
PAMMCEDC_03218 0.0 fumB 4.2.1.2 - C ko:K01676 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible hydration of fumarate to (S)- malate
PAMMCEDC_03219 0.0 - - - S ko:K06978 - ko00000 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
PAMMCEDC_03220 0.0 - - - JM - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_03221 6.26e-288 hflX - - S ko:K03665 - ko00000,ko03009 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PAMMCEDC_03222 0.0 - - - S ko:K21572 - ko00000,ko02000 Pfam:SusD
PAMMCEDC_03223 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_03224 3.61e-262 - - - M - - - COG NOG24980 non supervised orthologous group
PAMMCEDC_03225 1.87e-83 - - - K ko:K13643 - ko00000,ko03000 2 iron, 2 sulfur cluster binding
PAMMCEDC_03226 5.3e-72 - - - L - - - Phage integrase SAM-like domain
PAMMCEDC_03227 1.24e-80 - - - S - - - COG NOG28168 non supervised orthologous group
PAMMCEDC_03228 1.86e-22 - - - - - - - -
PAMMCEDC_03229 1.57e-162 - - - D - - - ATPase involved in chromosome partitioning K01529
PAMMCEDC_03230 1.15e-208 - - - S - - - Putative amidoligase enzyme
PAMMCEDC_03231 2.5e-47 - - - - - - - -
PAMMCEDC_03232 3.69e-15 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_03233 1.26e-65 - - - L - - - Helix-turn-helix domain
PAMMCEDC_03234 6.45e-284 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_03235 3.13e-293 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_03236 5.4e-26 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_03237 7.42e-87 M1-674 3.4.21.107 - O ko:K01173,ko:K04771 ko01503,ko02020,ko04210,map01503,map02020,map04210 ko00000,ko00001,ko00002,ko01000,ko01002,ko03029,ko03110 serine-type endopeptidase activity
PAMMCEDC_03239 8.74e-62 - - - S - - - Helix-turn-helix domain
PAMMCEDC_03240 3.66e-64 - - - K - - - Helix-turn-helix domain
PAMMCEDC_03241 2.68e-67 - - - S - - - Helix-turn-helix domain
PAMMCEDC_03242 2.07e-303 virE2 - - S - - - Virulence-associated protein E
PAMMCEDC_03243 2.25e-265 - - - L - - - Toprim-like
PAMMCEDC_03244 6.64e-82 - - - S - - - Bacterial mobilisation protein (MobC)
PAMMCEDC_03245 1.48e-219 - - - U - - - Relaxase mobilization nuclease domain protein
PAMMCEDC_03246 5.35e-160 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_03247 7.69e-73 - - - S - - - Helix-turn-helix domain
PAMMCEDC_03248 1.29e-148 - - - S - - - RteC protein
PAMMCEDC_03249 1.1e-108 - - - - - - - -
PAMMCEDC_03250 4.3e-188 - - - K - - - helix_turn_helix, Lux Regulon
PAMMCEDC_03251 0.0 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Divergent AAA domain protein
PAMMCEDC_03252 2.29e-252 - - - S - - - Protein of unknown function (DUF2971)
PAMMCEDC_03253 0.0 - 5.99.1.2 - L ko:K03169 - ko00000,ko01000,ko03032 COG0550 Topoisomerase IA
PAMMCEDC_03254 1.02e-33 - - - - - - - -
PAMMCEDC_03256 2.35e-27 - - - - - - - -
PAMMCEDC_03257 1.14e-101 - - - S - - - PRTRC system protein E
PAMMCEDC_03258 4.3e-44 - - - S - - - Prokaryotic Ubiquitin
PAMMCEDC_03259 3.58e-171 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_03260 1.25e-136 - - - S - - - PRTRC system protein B
PAMMCEDC_03261 1.74e-159 - - - H - - - ThiF family
PAMMCEDC_03264 6.57e-187 - - - M - - - Protein of unknown function (DUF3575)
PAMMCEDC_03265 4.51e-204 - - - - - - - -
PAMMCEDC_03266 1.72e-243 - - - S - - - Fimbrillin-like
PAMMCEDC_03267 0.0 - - - S - - - Fimbrillin-like
PAMMCEDC_03268 0.0 - - - - - - - -
PAMMCEDC_03269 2.53e-80 - - - S - - - 23S rRNA-intervening sequence protein
PAMMCEDC_03270 3.62e-15 - - - L - - - COG COG3344 Retron-type reverse transcriptase
PAMMCEDC_03271 5.61e-154 - - - L - - - COG COG3344 Retron-type reverse transcriptase
PAMMCEDC_03273 4.42e-277 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_03274 7.07e-233 - - - T ko:K07713 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Psort location Cytoplasmic, score
PAMMCEDC_03275 3.89e-48 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_03276 4.39e-62 - - - K - - - MerR HTH family regulatory protein
PAMMCEDC_03277 8.97e-62 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_03278 1.2e-284 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_03279 1.58e-253 - - - L - - - Phage integrase SAM-like domain
PAMMCEDC_03280 3.25e-223 miaA2 2.5.1.75 - F ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 ko00000,ko00001,ko01000,ko01006,ko03016 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PAMMCEDC_03281 3.16e-231 - - - I - - - lipid kinase, YegS Rv2252 BmrU family
PAMMCEDC_03282 6.34e-184 kdsA 2.5.1.55 - H ko:K01627 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Belongs to the KdsA family
PAMMCEDC_03283 7.55e-120 - 1.16.3.1 - S ko:K03594 ko00860,map00860 ko00000,ko00001,ko01000 Ferritin-like domain
PAMMCEDC_03284 6.24e-25 - - - - - - - -
PAMMCEDC_03285 1.55e-159 - - - K ko:K21556 - ko00000,ko03000 - catabolite gene activator and regulatory subunit of cAMP-dependent protein
PAMMCEDC_03286 0.0 glnA 6.3.1.2 - S ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 Glutamate--ammonia ligase, catalytic domain protein
PAMMCEDC_03287 0.0 - - - - - - - -
PAMMCEDC_03288 0.0 - - - MU - - - Psort location OuterMembrane, score
PAMMCEDC_03289 1.68e-228 - - - M ko:K01993 - ko00000 Biotin-lipoyl like
PAMMCEDC_03290 1.19e-276 - - - V ko:K01992 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03291 9.81e-279 - - - V ko:K01992 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03292 0.0 - - - Q - - - depolymerase
PAMMCEDC_03293 0.0 - 3.2.1.51 GH29 G ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 alpha-L-fucosidase
PAMMCEDC_03294 2.44e-207 nucA_1 - - F ko:K01173 ko04210,map04210 ko00000,ko00001,ko03029 Psort location Extracellular, score
PAMMCEDC_03295 0.0 abf2 3.2.1.55 GH51 G ko:K01209 ko00520,map00520 ko00000,ko00001,ko01000 Alpha-L-arabinofuranosidase domain protein
PAMMCEDC_03296 3.38e-230 mltG - - S ko:K07082 - ko00000 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PAMMCEDC_03297 2.07e-193 - - - C - - - 4Fe-4S binding domain protein
PAMMCEDC_03298 1.51e-75 rplT - - J ko:K02887 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PAMMCEDC_03299 3.13e-38 rpmI - - J ko:K02916 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL35 family
PAMMCEDC_03300 1.25e-134 infC - - J ko:K02520 - ko00000,ko03012,ko03029 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PAMMCEDC_03301 0.0 thrS 6.1.1.3 - J ko:K01868 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PAMMCEDC_03302 8.67e-204 - - - S - - - COG COG0457 FOG TPR repeat
PAMMCEDC_03303 1.14e-130 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PAMMCEDC_03304 2.41e-92 ruvX - - L ko:K07447 - ko00000,ko01000 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PAMMCEDC_03305 2.64e-307 - - - - - - - -
PAMMCEDC_03306 2.12e-181 - - - S - - - Domain of unknown function (DUF3869)
PAMMCEDC_03307 9.04e-237 - - - M ko:K03286 - ko00000,ko02000 OmpA family
PAMMCEDC_03308 2.33e-238 - - - S - - - COG NOG26583 non supervised orthologous group
PAMMCEDC_03309 1.29e-95 - - - D - - - Sporulation and cell division repeat protein
PAMMCEDC_03310 1.19e-33 - - - S - - - COG NOG35214 non supervised orthologous group
PAMMCEDC_03311 7.42e-68 - - - S - - - COG NOG30994 non supervised orthologous group
PAMMCEDC_03312 4.32e-53 - - - S - - - COG NOG35393 non supervised orthologous group
PAMMCEDC_03313 0.0 - - - M - - - Tricorn protease homolog
PAMMCEDC_03314 0.0 - - - P ko:K08138 - ko00000,ko02000 Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PAMMCEDC_03315 0.0 eptA - - S - - - lipid A phosphoethanolamine transferase, associated with polymyxin resistance
PAMMCEDC_03316 3.54e-301 - - - M - - - COG NOG06295 non supervised orthologous group
PAMMCEDC_03317 3.34e-293 - - - MU - - - Psort location OuterMembrane, score
PAMMCEDC_03318 0.0 - - - V - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMMCEDC_03319 3.54e-246 - - - M - - - Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMMCEDC_03320 2.34e-203 - - - K - - - transcriptional regulator (AraC family)
PAMMCEDC_03321 0.0 - - - EU - - - Peptidase, S9A B C family, catalytic domain protein
PAMMCEDC_03322 4.97e-93 - - - S - - - Domain of unknown function (DUF4891)
PAMMCEDC_03323 1.94e-105 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03324 2.45e-23 - - - - - - - -
PAMMCEDC_03325 2.32e-29 - - - S - - - YtxH-like protein
PAMMCEDC_03326 3.66e-296 trpB 4.2.1.20, 5.3.1.24 - E ko:K01696,ko:K01817 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PAMMCEDC_03327 0.0 trpE 4.1.3.27 - EH ko:K01657 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 Anthranilate synthase component I
PAMMCEDC_03328 1.04e-141 trpG 2.6.1.85, 4.1.3.27 - EH ko:K01658,ko:K01664 ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 Glutamine amidotransferase, class I
PAMMCEDC_03329 4.89e-237 trpD 2.4.2.18, 4.1.3.27 - F ko:K00766,ko:K13497 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PAMMCEDC_03330 1.61e-180 trpC 4.1.1.48 - E ko:K01609 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the TrpC family
PAMMCEDC_03331 2.17e-152 trpF 5.3.1.24 - E ko:K01817 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the TrpF family
PAMMCEDC_03332 5.03e-182 trpA 4.2.1.20 - E ko:K01695 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PAMMCEDC_03333 6.1e-255 ansA 3.5.1.1 - EJ ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 ko00000,ko00001,ko01000 L-asparaginase, type I
PAMMCEDC_03334 4.64e-159 srrA - - K ko:K07657,ko:K07658 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PAMMCEDC_03335 0.0 - 2.7.13.3 - T ko:K02484,ko:K07636 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_03336 6.45e-151 sfp - - H - - - Belongs to the P-Pant transferase superfamily
PAMMCEDC_03337 2.06e-313 gldE - - S - - - Gliding motility-associated protein GldE
PAMMCEDC_03338 1.15e-104 ssb - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Single-stranded DNA-binding protein
PAMMCEDC_03339 6.42e-264 mutY - - L ko:K03575 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 COG1194 A G-specific DNA glycosylase
PAMMCEDC_03340 4.76e-56 hupA - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Belongs to the bacterial histone-like protein family
PAMMCEDC_03341 0.0 rng - - J ko:K08301 - ko00000,ko01000,ko03009,ko03019 S1 RNA binding domain
PAMMCEDC_03342 6.93e-194 - 3.5.1.28 - M ko:K01448 ko01503,map01503 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 N-acetylmuramoyl-L-alanine amidase
PAMMCEDC_03343 3.83e-127 - - - CO - - - Redoxin family
PAMMCEDC_03344 9.27e-140 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03345 0.0 lysS 6.1.1.6 - J ko:K04567 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family
PAMMCEDC_03346 8.45e-238 gpsA 1.1.1.94 - I ko:K00057 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 Glycerol-3-phosphate dehydrogenase
PAMMCEDC_03347 0.0 pgi 5.3.1.9 - G ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GPI family
PAMMCEDC_03348 7.46e-177 yfbT - - S - - - HAD hydrolase, family IA, variant 3
PAMMCEDC_03349 1.49e-314 - - - S - - - Abhydrolase family
PAMMCEDC_03350 0.0 - - - GM ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_03351 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_03352 2.39e-254 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PAMMCEDC_03353 2.72e-149 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor, ECF subfamily
PAMMCEDC_03354 1.1e-298 nagC 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PAMMCEDC_03355 5.03e-230 nanA 4.1.3.3, 4.2.1.41, 4.3.3.7 - EM ko:K01639,ko:K01707,ko:K01714 ko00053,ko00261,ko00300,ko00520,ko01100,ko01110,ko01120,ko01130,ko01230,map00053,map00261,map00300,map00520,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the DapA family
PAMMCEDC_03356 5.51e-311 nanE 5.1.3.8 - G ko:K01787 ko00520,map00520 ko00000,ko00001,ko01000 COG COG2942 N-acyl-D-glucosamine 2-epimerase
PAMMCEDC_03357 1.51e-301 - - - G ko:K08191 - ko00000,ko02000 Transporter, major facilitator family protein
PAMMCEDC_03358 6.41e-192 nagB 3.5.99.6 - G ko:K02564 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PAMMCEDC_03359 0.0 nagB 3.5.99.6 - G ko:K02564 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_03360 2.32e-185 - - - L - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_03361 9.6e-213 - - - K - - - transcriptional regulator (AraC family)
PAMMCEDC_03362 7.69e-253 - - - M - - - Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMMCEDC_03363 0.0 - - - V - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMMCEDC_03364 0.0 - - - MU - - - Psort location OuterMembrane, score
PAMMCEDC_03365 1.56e-164 - - - L - - - Bacterial DNA-binding protein
PAMMCEDC_03366 5.48e-156 - - - - - - - -
PAMMCEDC_03367 6.96e-32 - - - - - - - -
PAMMCEDC_03368 3.05e-151 - - - H - - - Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
PAMMCEDC_03369 1.11e-284 - 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Belongs to the metallo-dependent hydrolases superfamily. NagA family
PAMMCEDC_03370 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PAMMCEDC_03371 0.0 - - - G - - - Alpha-1,2-mannosidase
PAMMCEDC_03372 0.0 nagZ3 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
PAMMCEDC_03373 4.47e-278 - - - S - - - Cyclically-permuted mutarotase family protein
PAMMCEDC_03374 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain protein
PAMMCEDC_03375 0.0 - 3.2.1.25 - G ko:K01192 ko00511,ko04142,map00511,map04142 ko00000,ko00001,ko01000 Glycosyl hydrolase family 2, sugar binding domain protein
PAMMCEDC_03376 0.0 estS 3.1.1.53 - E ko:K05970 - ko00000,ko01000 Carbohydrate esterase, sialic acid-specific acetylesterase
PAMMCEDC_03377 1.02e-158 estA - - E - - - GDSL-like Lipase/Acylhydrolase family
PAMMCEDC_03378 0.0 - - - G - - - Glycosyl hydrolase family 20, catalytic domain
PAMMCEDC_03379 0.0 nanH 3.2.1.18 GH33 G ko:K01186 ko00511,ko00600,ko04142,map00511,map00600,map04142 ko00000,ko00001,ko01000,ko02042 BNR Asp-box repeat protein
PAMMCEDC_03380 0.0 - - - K ko:K21572 - ko00000,ko02000 Pfam:SusD
PAMMCEDC_03381 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_03383 2.5e-258 asnA 6.3.1.1 - E ko:K01914 ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 10.00
PAMMCEDC_03384 3.19e-166 ung 3.2.2.27 - L ko:K03648 ko03410,ko05340,map03410,map05340 ko00000,ko00001,ko01000,ko03400 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PAMMCEDC_03385 0.0 - - - M - - - Psort location OuterMembrane, score 9.49
PAMMCEDC_03386 3.7e-133 - - - H ko:K06950 - ko00000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_03387 2.74e-289 - - - S - - - protein conserved in bacteria
PAMMCEDC_03388 2.93e-112 - - - U - - - Peptidase S24-like
PAMMCEDC_03389 9.83e-237 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_03390 0.0 - - - V ko:K06148 - ko00000,ko02000 ATPases associated with a variety of cellular activities
PAMMCEDC_03391 5.14e-270 - - - S - - - Uncharacterised nucleotidyltransferase
PAMMCEDC_03392 1.23e-57 - - - S - - - Coenzyme PQQ synthesis protein D (PqqD)
PAMMCEDC_03393 0.0 - - - - - - - -
PAMMCEDC_03394 3.61e-06 - - - - - - - -
PAMMCEDC_03396 6.84e-59 - - - S - - - Protein of unknown function (DUF1016)
PAMMCEDC_03397 2.6e-169 - - - S - - - Protein of unknown function (DUF1016)
PAMMCEDC_03398 0.0 hsdM 2.1.1.72 - V ko:K03427 - ko00000,ko01000,ko02048 HsdM N-terminal domain
PAMMCEDC_03399 0.0 - 3.1.21.3 - L ko:K01153 - ko00000,ko01000,ko02048 COG COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases
PAMMCEDC_03400 1.05e-40 - - - K - - - Cro/C1-type HTH DNA-binding domain
PAMMCEDC_03401 1.16e-200 - - - L - - - Domain of unknown function (DUF4357)
PAMMCEDC_03402 8.92e-96 - - - S - - - protein conserved in bacteria
PAMMCEDC_03403 1.59e-07 - - - K - - - DNA-binding helix-turn-helix protein
PAMMCEDC_03404 0.0 - - - S - - - Protein of unknown function DUF262
PAMMCEDC_03405 0.0 - - - S - - - Protein of unknown function DUF262
PAMMCEDC_03406 0.0 - - - - - - - -
PAMMCEDC_03407 5.35e-213 - - - S ko:K07017 - ko00000 Putative esterase
PAMMCEDC_03409 1.54e-83 - - - V - - - MATE efflux family protein
PAMMCEDC_03410 4.49e-259 - - - S ko:K06889 - ko00000 of the alpha beta superfamily
PAMMCEDC_03411 1.09e-132 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 COG COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
PAMMCEDC_03412 2.47e-224 - - - S ko:K03453 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03413 3.91e-287 amiA 3.5.1.28 - M ko:K01448 ko01503,map01503 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 N-acetylmuramoyl-L-alanine amidase
PAMMCEDC_03414 4.54e-208 - - - Q ko:K02067 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component
PAMMCEDC_03415 0.0 dnaA - - L ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PAMMCEDC_03416 3.04e-177 - 1.5.1.38, 1.5.1.39 - C ko:K19285,ko:K19286 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 Nitroreductase family
PAMMCEDC_03417 0.0 nrd 1.17.4.1 - F ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen
PAMMCEDC_03418 0.0 - - - M - - - protein involved in outer membrane biogenesis
PAMMCEDC_03419 3.35e-84 folB 1.13.11.81, 4.1.2.25, 5.1.99.8 - H ko:K01633 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PAMMCEDC_03420 8.89e-214 - - - L - - - DNA repair photolyase K01669
PAMMCEDC_03421 1.05e-252 - - - S ko:K07011 - ko00000 Glycosyl transferase family group 2
PAMMCEDC_03422 0.0 yqeV 2.8.4.5 - J ko:K18707 - ko00000,ko01000,ko03016 Psort location Cytoplasmic, score 8.96
PAMMCEDC_03423 0.0 - 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 Psort location CytoplasmicMembrane, score 9.82
PAMMCEDC_03424 5.04e-22 - - - - - - - -
PAMMCEDC_03425 7.63e-12 - - - - - - - -
PAMMCEDC_03426 2.17e-09 - - - - - - - -
PAMMCEDC_03427 8.85e-92 rplI - - J ko:K02939 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 binds to the 23S rRNA
PAMMCEDC_03428 8.32e-56 rpsR - - J ko:K02963 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PAMMCEDC_03429 5.12e-73 rpsF - - J ko:K02990 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Binds together with S18 to 16S ribosomal RNA
PAMMCEDC_03430 9.21e-99 ohrR - - K - - - Transcriptional regulator, MarR family
PAMMCEDC_03431 1.36e-30 - - - - - - - -
PAMMCEDC_03432 2.57e-165 rprY - - K - - - COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PAMMCEDC_03433 0.0 rprX 2.7.13.3 - T ko:K07636 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 two-component regulatory system, sensor kinase protein
PAMMCEDC_03434 0.0 fusA2 - - J ko:K02355 - ko00000,ko03012,ko03029 Psort location Cytoplasmic, score 9.26
PAMMCEDC_03436 9.46e-285 hemN - - H - - - Involved in the biosynthesis of porphyrin-containing compound
PAMMCEDC_03438 0.0 - - - P - - - TonB-dependent receptor
PAMMCEDC_03439 1.17e-247 - - - S - - - COG NOG27441 non supervised orthologous group
PAMMCEDC_03440 7.47e-141 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PAMMCEDC_03441 1.16e-88 - - - - - - - -
PAMMCEDC_03442 1.71e-208 - - - PT - - - Domain of unknown function (DUF4974)
PAMMCEDC_03443 0.0 - - - P - - - TonB-dependent receptor
PAMMCEDC_03444 9.27e-248 - - - S - - - COG NOG27441 non supervised orthologous group
PAMMCEDC_03445 0.0 - 3.1.1.53 - G ko:K05970 - ko00000,ko01000 Glycosyl hydrolase family 2, sugar binding domain protein
PAMMCEDC_03446 0.0 aguA 3.2.1.139 - G ko:K01235 - ko00000,ko01000 Alpha-glucuronidase
PAMMCEDC_03447 0.0 - - - S - - - COG NOG06097 non supervised orthologous group
PAMMCEDC_03448 0.0 - - - G - - - candidate polyfunctional acetylxylan esterase b-xylosidase A-L-arabinofuranosidase, CBM9 module, glycoside hydrolase family 43 protein and carbohydrate esterase family 6 protein
PAMMCEDC_03449 7.31e-12 - - - P ko:K07214 - ko00000 Putative esterase
PAMMCEDC_03450 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_03451 0.0 - - - E ko:K21572 - ko00000,ko02000 Pfam:SusD
PAMMCEDC_03452 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_03453 0.0 xylB 3.2.1.37, 3.2.1.55 GH43,GH51 G ko:K01198,ko:K01209 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 43 family
PAMMCEDC_03454 1.61e-256 xynB - - G - - - Glycosyl hydrolases family 43
PAMMCEDC_03455 2.81e-281 xynA 3.2.1.8 - G ko:K01181 - ko00000,ko01000 Beta-xylanase
PAMMCEDC_03456 0.0 gph - - G ko:K03292 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03457 9.94e-205 bglA_1 - - G - - - Glycosyl hydrolase family 16
PAMMCEDC_03458 0.0 glmM 5.4.2.8 - G ko:K01840 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_03459 3.18e-148 - - - S - - - COG NOG30041 non supervised orthologous group
PAMMCEDC_03460 1.97e-255 nrnA 3.1.13.3, 3.1.3.7 - S ko:K06881 ko00920,ko01100,ko01120,map00920,map01100,map01120 ko00000,ko00001,ko01000,ko03400 DHH family
PAMMCEDC_03461 0.0 comEC - - S ko:K02238 - ko00000,ko00002,ko02044 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03462 1.57e-151 rpe 5.1.3.1 - G ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_03463 2.08e-300 - - - S - - - Outer membrane protein beta-barrel domain
PAMMCEDC_03464 2.13e-124 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PAMMCEDC_03465 1.15e-188 - - - S - - - NigD-like N-terminal OB domain
PAMMCEDC_03466 1.17e-220 fmt 2.1.2.9 - J ko:K00604 ko00670,ko00970,map00670,map00970 ko00000,ko00001,ko01000 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PAMMCEDC_03467 0.0 clcB - - P ko:K03281 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03468 3.49e-133 rimN 2.7.7.87 - J ko:K07566 - ko00000,ko01000,ko03009,ko03016 Belongs to the SUA5 family
PAMMCEDC_03469 0.0 xynB_10 - - G - - - Belongs to the glycosyl hydrolase 43 family
PAMMCEDC_03470 0.0 - - - E ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_03471 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_03472 0.0 - - - G - - - Glycosyl hydrolase family 65, N-terminal domain
PAMMCEDC_03473 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_03474 7.5e-283 - 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Belongs to the metallo-dependent hydrolases superfamily. NagA family
PAMMCEDC_03475 0.0 - - - V - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMMCEDC_03476 0.0 - - - MU - - - Psort location OuterMembrane, score
PAMMCEDC_03477 0.0 - - - V - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMMCEDC_03478 1.55e-252 - - - M - - - Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMMCEDC_03479 0.0 - - - M - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03480 0.0 - - - E - - - non supervised orthologous group
PAMMCEDC_03481 2.09e-189 - 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
PAMMCEDC_03484 1.37e-248 - - - - - - - -
PAMMCEDC_03485 3.49e-48 - - - S - - - NVEALA protein
PAMMCEDC_03486 5.65e-179 - - - S - - - protein BT4048 SWALL AAO79153 (EMBL AE016943) (373 aa) fasta scores E()
PAMMCEDC_03487 2.58e-45 - - - S - - - NVEALA protein
PAMMCEDC_03488 3.09e-245 - - - S - - - Transcriptional regulatory protein, C terminal
PAMMCEDC_03489 8.16e-266 - - - S - - - TolB-like 6-blade propeller-like
PAMMCEDC_03490 0.0 - - - KT - - - AraC family
PAMMCEDC_03491 7.99e-181 nadX 1.4.1.21 - S ko:K06989 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Domain of unknown function DUF108
PAMMCEDC_03492 2.87e-215 - - - C - - - Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAMMCEDC_03493 1.61e-179 - - - O ko:K05801 - ko00000,ko03110 Psort location Cytoplasmic, score
PAMMCEDC_03494 0.0 prfC - - J ko:K02837 - ko00000,ko03012 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PAMMCEDC_03495 2.76e-213 rfbD 1.1.1.133 - M ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PAMMCEDC_03496 6.62e-128 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_03497 5.23e-151 - - - E - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03498 0.0 purL 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate
PAMMCEDC_03499 0.0 - - - T - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_03500 2.78e-121 chrA - - P ko:K07240 - ko00000,ko02000 Psort location CytoplasmicMembrane, score
PAMMCEDC_03501 1.21e-128 - - - P ko:K07240 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03502 0.0 - - - KT - - - Y_Y_Y domain
PAMMCEDC_03503 0.0 - 3.2.1.177 GH31 G ko:K01811 - ko00000,ko01000 Belongs to the glycosyl hydrolase 31 family
PAMMCEDC_03504 0.0 yngK - - S - - - lipoprotein YddW precursor
PAMMCEDC_03505 0.0 uvrA1 - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PAMMCEDC_03506 2.92e-260 - - - S - - - Endonuclease Exonuclease phosphatase family
PAMMCEDC_03507 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
PAMMCEDC_03508 2.28e-113 - - - MU - - - COG NOG29365 non supervised orthologous group
PAMMCEDC_03509 3.54e-43 - - - S - - - COG NOG34202 non supervised orthologous group
PAMMCEDC_03510 0.0 cstA - - T ko:K06200 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03511 0.0 yngK - - S - - - lipoprotein YddW precursor K01189
PAMMCEDC_03512 7.52e-284 purM 6.3.3.1 - F ko:K01933 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PAMMCEDC_03513 3.09e-267 prfA - - J ko:K02835 - ko00000,ko03012 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PAMMCEDC_03514 1.03e-197 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the OMP decarboxylase family. Type 2 subfamily
PAMMCEDC_03515 3.99e-297 - - - S ko:K06885 - ko00000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_03516 3.29e-157 lpxD 2.3.1.191 - M ko:K02536 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PAMMCEDC_03517 0.0 fabZ 3.5.1.108, 4.2.1.59 - IM ko:K16363 ko00061,ko00540,ko01100,ko01212,map00061,map00540,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004,ko01005 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis
PAMMCEDC_03518 7.62e-118 lpxA 2.3.1.129 - M ko:K00677 ko00540,ko01100,ko01503,map00540,map01100,map01503 ko00000,ko00001,ko00002,ko01000,ko01005 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PAMMCEDC_03519 4.94e-122 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_03520 6.05e-220 miaA 2.5.1.75 - F ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 ko00000,ko00001,ko01000,ko01006,ko03016 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PAMMCEDC_03521 0.0 - 3.2.1.51 GH29 G ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 Alpha-L-fucosidase
PAMMCEDC_03522 1.02e-185 - - - - - - - -
PAMMCEDC_03523 0.0 - - - CO - - - COG NOG24773 non supervised orthologous group
PAMMCEDC_03524 1.8e-290 - - - CO - - - Glutathione peroxidase
PAMMCEDC_03525 0.0 - - - S - - - Tetratricopeptide repeat protein
PAMMCEDC_03526 0.0 - - - KT - - - COG NOG25147 non supervised orthologous group
PAMMCEDC_03527 1.38e-82 - - - K - - - Transcriptional regulator, BlaI MecI CopY family
PAMMCEDC_03528 1.12e-310 - 3.2.1.180 GH88 S ko:K18581 - ko00000,ko01000 Glycosyl Hydrolase Family 88
PAMMCEDC_03529 0.0 xynBA - - G - - - Belongs to the glycosyl hydrolase 43 family
PAMMCEDC_03530 0.0 - 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Glycosyl-hydrolase 97 C-terminal, oligomerisation
PAMMCEDC_03531 0.0 - - - - - - - -
PAMMCEDC_03532 0.0 - - - D ko:K09955 - ko00000 protein conserved in bacteria
PAMMCEDC_03533 1.8e-207 bioH - - I - - - carboxylic ester hydrolase activity
PAMMCEDC_03534 0.0 - - - M - - - Belongs to the glycosyl hydrolase 28 family
PAMMCEDC_03535 0.0 - - - G - - - beta-fructofuranosidase activity
PAMMCEDC_03536 0.0 - - - S - - - Heparinase II/III-like protein
PAMMCEDC_03537 0.0 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PAMMCEDC_03538 0.0 - - - S - - - Serine hydrolase involved in the detoxification of formaldehyde
PAMMCEDC_03540 1.79e-190 - - - S - - - PD-(D/E)XK nuclease family transposase
PAMMCEDC_03541 0.0 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PAMMCEDC_03542 0.0 - - - S ko:K21572 - ko00000,ko02000 COG NOG28394 non supervised orthologous group
PAMMCEDC_03543 0.0 - - - H - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_03544 3.88e-118 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PAMMCEDC_03545 0.0 - - - KT - - - Y_Y_Y domain
PAMMCEDC_03546 0.0 - - - S - - - Heparinase II/III-like protein
PAMMCEDC_03547 9.08e-197 - - - S - - - Serine hydrolase involved in the detoxification of formaldehyde
PAMMCEDC_03548 5.97e-187 - - - S - - - Serine hydrolase involved in the detoxification of formaldehyde
PAMMCEDC_03549 0.0 - 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 glycosyl hydrolase, family 3
PAMMCEDC_03550 2.3e-124 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PAMMCEDC_03551 2.45e-310 - 3.2.1.180 GH88 S ko:K18581 - ko00000,ko01000 Glycosyl Hydrolase Family 88
PAMMCEDC_03552 1.25e-191 - - - KT - - - Y_Y_Y domain
PAMMCEDC_03553 0.0 - - - KT - - - Y_Y_Y domain
PAMMCEDC_03556 4.14e-90 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_03557 0.0 - - - S ko:K07091 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Permease, YjgP YjgQ family
PAMMCEDC_03558 1.49e-293 ribBA 3.5.4.25, 4.1.99.12 - H ko:K14652 ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PAMMCEDC_03559 1.86e-288 aspC 2.6.1.1 - E ko:K00812 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko01000,ko01007 COG0436 Aspartate tyrosine aromatic aminotransferase
PAMMCEDC_03560 3.31e-20 - - - C - - - 4Fe-4S binding domain
PAMMCEDC_03561 0.0 nagA - - G - - - b-glycosidase, glycoside hydrolase family 3 protein
PAMMCEDC_03562 5.76e-208 - 3.1.3.5, 3.6.1.45 - F ko:K01081,ko:K11751 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 Ser Thr phosphatase family protein
PAMMCEDC_03563 7.71e-182 ushA 3.1.3.5 - F ko:K01081 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 5'-nucleotidase, C-terminal domain
PAMMCEDC_03564 8.07e-76 rplS - - J ko:K02884 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PAMMCEDC_03566 0.0 - - - T - - - Response regulator receiver domain
PAMMCEDC_03567 7.29e-75 rhaU 5.1.3.32 - G ko:K03534 - ko00000,ko01000 Involved in the anomeric conversion of L-rhamnose
PAMMCEDC_03568 0.0 yteR_9 - - E - - - Glycosyl Hydrolase Family 88
PAMMCEDC_03569 0.0 - 4.2.2.23 PL11 E ko:K18197 - ko00000,ko01000 FG-GAP repeat protein
PAMMCEDC_03570 0.0 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PAMMCEDC_03571 0.0 - - - S - - - COG NOG06097 non supervised orthologous group
PAMMCEDC_03572 0.0 - - - G - - - COG NOG26513 non supervised orthologous group
PAMMCEDC_03573 0.0 - - - G - - - hydrolase, family 65, central catalytic
PAMMCEDC_03574 0.0 - - - O - - - Pectic acid lyase
PAMMCEDC_03575 0.0 - - - GM ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_03576 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_03577 4.38e-237 - - - PT - - - Domain of unknown function (DUF4974)
PAMMCEDC_03578 4.23e-135 - - - K ko:K03088 - ko00000,ko03021 sigma70 factor
PAMMCEDC_03580 0.0 - - - - - - - -
PAMMCEDC_03581 0.0 - - - E - - - GDSL-like protein
PAMMCEDC_03582 0.0 - 4.2.2.23 PL11 S ko:K18197 - ko00000,ko01000 FG-GAP repeat protein
PAMMCEDC_03583 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PAMMCEDC_03584 0.0 - - - G - - - alpha-L-rhamnosidase
PAMMCEDC_03585 0.0 - - - P - - - Arylsulfatase
PAMMCEDC_03586 0.0 - 4.2.2.6 - U ko:K01730 ko00040,map00040 ko00000,ko00001,ko01000 Oligogalacturonate lyase
PAMMCEDC_03587 8.45e-93 - - - G - - - CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238
PAMMCEDC_03588 0.0 - - - E ko:K21572 - ko00000,ko02000 Pfam:SusD
PAMMCEDC_03589 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_03590 1.03e-266 trpS 6.1.1.2 - J ko:K01867 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
PAMMCEDC_03591 9.66e-178 - - - - - - - -
PAMMCEDC_03592 0.0 carB 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ)
PAMMCEDC_03593 0.0 - - - H - - - Psort location OuterMembrane, score
PAMMCEDC_03594 3.1e-117 - - - CO - - - Redoxin family
PAMMCEDC_03595 2.06e-184 yaaA - - S ko:K09861 - ko00000 Belongs to the UPF0246 family
PAMMCEDC_03596 4.21e-286 - - - M - - - Psort location OuterMembrane, score
PAMMCEDC_03597 4.53e-263 - - - S - - - Sulfotransferase family
PAMMCEDC_03598 0.0 cysN 2.7.1.25, 2.7.7.4 - H ko:K00955,ko:K00956 ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily
PAMMCEDC_03599 2.38e-223 cysD 2.7.7.4 - H ko:K00957 ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130 ko00000,ko00001,ko00002,ko01000 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase) FAD synthetase
PAMMCEDC_03600 2.24e-140 cysC 2.7.1.25 - F ko:K00860 ko00230,ko00920,ko01100,ko01120,map00230,map00920,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of activated sulfate
PAMMCEDC_03601 0.0 - - - P - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03602 1.15e-197 cysQ 3.1.3.7 - P ko:K01082 ko00920,ko01100,ko01120,ko01130,map00920,map01100,map01120,map01130 ko00000,ko00001,ko01000,ko03016 3'(2'),5'-bisphosphate nucleotidase
PAMMCEDC_03603 5.26e-302 - - - M - - - COG NOG26016 non supervised orthologous group
PAMMCEDC_03604 0.0 mutL - - L ko:K03572 ko03430,map03430 ko00000,ko00001,ko03400 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PAMMCEDC_03605 1.86e-63 - - - S - - - COG NOG23401 non supervised orthologous group
PAMMCEDC_03606 0.0 lptD - - M - - - COG NOG06415 non supervised orthologous group
PAMMCEDC_03607 0.0 surA 5.2.1.8 - M ko:K03771 - ko00000,ko01000,ko03110 peptidylprolyl isomerase
PAMMCEDC_03608 1.36e-211 - - - O - - - COG NOG23400 non supervised orthologous group
PAMMCEDC_03609 0.0 - 5.2.1.8 - M ko:K03771 - ko00000,ko01000,ko03110 COG COG0760 Parvulin-like peptidyl-prolyl isomerase
PAMMCEDC_03610 0.0 guaB 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
PAMMCEDC_03612 0.0 recQ 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
PAMMCEDC_03613 1.3e-300 clpX - - O ko:K03544 ko04112,map04112 ko00000,ko00001,ko03110 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PAMMCEDC_03614 1.34e-155 clpP 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PAMMCEDC_03615 6.37e-312 tig - - O ko:K03545 - ko00000 peptidyl-prolyl cis-trans isomerase (trigger factor)
PAMMCEDC_03616 2.07e-50 - - - S - - - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
PAMMCEDC_03617 2.81e-191 lptB - - S ko:K06861 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Psort location Cytoplasmic, score 9.12
PAMMCEDC_03618 6.53e-172 mlaE - - Q ko:K02066 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03619 3.69e-182 metN - - Q ko:K02065 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, ATP-binding protein
PAMMCEDC_03620 3.8e-315 der - - S ko:K03977 - ko00000,ko03009 GTPase that plays an essential role in the late steps of ribosome biogenesis
PAMMCEDC_03621 2.25e-207 era - - S ko:K03595 - ko00000,ko03009,ko03029 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PAMMCEDC_03622 8.58e-249 fabH 2.3.1.180 - I ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PAMMCEDC_03623 3.5e-40 rpmF - - J ko:K02911 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bL32 family
PAMMCEDC_03624 3.99e-129 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_03625 1.04e-249 - - - S - - - Peptide-N-glycosidase F, N terminal
PAMMCEDC_03626 1.98e-155 - - - S - - - Peptide-N-glycosidase F, N terminal
PAMMCEDC_03627 6.43e-153 - - - L - - - Bacterial DNA-binding protein
PAMMCEDC_03629 3.45e-286 - - - S - - - Domain of unknonw function from B. Theta Gene description (DUF3874)
PAMMCEDC_03630 0.0 - - - T - - - Psort location CytoplasmicMembrane, score 7.88
PAMMCEDC_03631 6.86e-255 - - - S - - - Endonuclease Exonuclease phosphatase family protein
PAMMCEDC_03632 1.58e-264 - 2.7.13.3 - T ko:K11527 - ko00000,ko01000,ko01001,ko02022 His Kinase A (phosphoacceptor) domain
PAMMCEDC_03633 6.41e-237 - 4.1.1.35 - GM ko:K08678 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko00002,ko01000 NAD dependent epimerase dehydratase family
PAMMCEDC_03634 3.75e-212 thiD 2.7.1.49, 2.7.4.7 - H ko:K00941 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 COG0351 Hydroxymethylpyrimidine phosphomethylpyrimidine kinase
PAMMCEDC_03635 3.12e-229 fabD 2.3.1.39 - I ko:K00645 ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 malonyl CoA-acyl carrier protein transacylase
PAMMCEDC_03636 1.19e-186 - - - S ko:K07001 - ko00000 esterase of the alpha-beta hydrolase superfamily
PAMMCEDC_03637 0.0 amyA2 - - G - - - Alpha amylase, catalytic domain
PAMMCEDC_03638 2.84e-263 hpaIIR 3.1.21.4 - L ko:K01155 - ko00000,ko01000,ko02048 COG NOG26934 non supervised orthologous group
PAMMCEDC_03639 5.06e-261 - 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PAMMCEDC_03640 2.95e-106 - - - J - - - Threonine alanine tRNA ligase second additional domain protein
PAMMCEDC_03641 2.66e-97 hsp20 - - O ko:K13993 ko04141,map04141 ko00000,ko00001,ko03110 Belongs to the small heat shock protein (HSP20) family
PAMMCEDC_03642 0.0 - - - T - - - Psort location CytoplasmicMembrane, score 7.88
PAMMCEDC_03643 0.0 carB 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ)
PAMMCEDC_03644 4.94e-271 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the CarA family
PAMMCEDC_03645 0.0 purF 2.4.2.14 - F ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 Psort location Cytoplasmic, score 8.96
PAMMCEDC_03646 0.0 glmS 2.6.1.16 - M ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 ko00000,ko00001,ko01000,ko01002 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PAMMCEDC_03647 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 - E ko:K00265,ko:K00284 ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 Class II glutamine amidotransferase
PAMMCEDC_03648 0.0 gltD 1.4.1.13, 1.4.1.14 - E ko:K00266 ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 COG0493 NADPH-dependent glutamate synthase beta chain and related
PAMMCEDC_03649 0.0 asnB 6.3.5.4 - E ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 ko00000,ko00001,ko01000,ko01002 Asparagine synthase, glutamine-hydrolyzing
PAMMCEDC_03650 7.36e-29 - - - H - - - COG NOG08812 non supervised orthologous group
PAMMCEDC_03651 3.58e-199 - - - S - - - Carboxypeptidase regulatory-like domain
PAMMCEDC_03653 0.0 - - - L - - - helicase
PAMMCEDC_03654 6.23e-72 - - - S - - - HEPN domain
PAMMCEDC_03655 2.22e-69 - - - S - - - Nucleotidyltransferase domain
PAMMCEDC_03656 6e-212 - - - S - - - Exopolysaccharide biosynthesis protein YbjH
PAMMCEDC_03657 5.8e-48 - - - - - - - -
PAMMCEDC_03658 6.81e-186 tagO - - M - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03659 3.16e-65 rplL - - J ko:K02935 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PAMMCEDC_03660 0.0 rpoB 2.7.7.6 - K ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAMMCEDC_03661 0.0 rpoC 2.7.7.6 - K ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAMMCEDC_03662 1.42e-74 - - - T - - - Protein of unknown function (DUF3467)
PAMMCEDC_03663 4.7e-89 rpsL - - J ko:K02950 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PAMMCEDC_03664 2.3e-106 rpsG - - J ko:K02992 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PAMMCEDC_03665 0.0 fusA - - J ko:K02355 - ko00000,ko03012,ko03029 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PAMMCEDC_03666 6.63e-63 rpsJ - - J ko:K02946 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Involved in the binding of tRNA to the ribosomes
PAMMCEDC_03667 2.34e-147 rplC - - J ko:K02906 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PAMMCEDC_03668 6.14e-140 rplD - - J ko:K02926 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the polypeptide exit tunnel
PAMMCEDC_03669 8.95e-61 rplW - - J ko:K02892 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PAMMCEDC_03670 5.06e-194 rplB - - J ko:K02886 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PAMMCEDC_03671 1.49e-58 rpsS - - J ko:K02965 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PAMMCEDC_03672 5.1e-88 rplV - - J ko:K02890 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PAMMCEDC_03673 4.12e-169 rpsC - - J ko:K02982 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PAMMCEDC_03674 1.88e-96 rplP - - J ko:K02878 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PAMMCEDC_03675 4.7e-35 rpmC - - J ko:K02904 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uL29 family
PAMMCEDC_03676 8.54e-54 rpsQ - - J ko:K02961 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PAMMCEDC_03677 7.94e-78 rplN - - J ko:K02874 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PAMMCEDC_03678 1.4e-69 rplX - - J ko:K02895 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PAMMCEDC_03679 1.04e-122 rplE - - J ko:K02931 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PAMMCEDC_03680 1.35e-61 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PAMMCEDC_03681 2.47e-88 rpsH - - J ko:K02994 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PAMMCEDC_03682 2.88e-131 rplF - - J ko:K02933 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PAMMCEDC_03683 6.5e-71 rplR - - J ko:K02881 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PAMMCEDC_03684 6.93e-112 rpsE - - J ko:K02988 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PAMMCEDC_03685 2.9e-31 rpmD - - J ko:K02907 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 50S ribosomal protein L30
PAMMCEDC_03686 5.98e-95 rplO - - J ko:K02876 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 binds to the 23S rRNA
PAMMCEDC_03687 1.96e-309 secY - - U ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PAMMCEDC_03688 1.15e-195 map 3.4.11.18 - E ko:K01265 - ko00000,ko01000,ko01002 Psort location Cytoplasmic, score
PAMMCEDC_03689 1.98e-44 infA - - J ko:K02518 - ko00000,ko03012 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PAMMCEDC_03690 1.06e-18 rpmJ - - J ko:K02919 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL36 family
PAMMCEDC_03691 1.24e-81 rpsM - - J ko:K02952 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PAMMCEDC_03692 1.01e-86 rpsK - - J ko:K02948 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PAMMCEDC_03693 3.08e-141 rpsD - - J ko:K02986 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PAMMCEDC_03694 3.41e-232 rpoA 2.7.7.6 - K ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAMMCEDC_03695 1.63e-92 rplQ - - J ko:K02879 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L17
PAMMCEDC_03696 1.69e-93 - - - - - - - -
PAMMCEDC_03697 1.89e-122 - - - S - - - COG NOG27987 non supervised orthologous group
PAMMCEDC_03698 0.0 mutS_2 - - L - - - DNA mismatch repair protein MutS
PAMMCEDC_03699 1.72e-126 - - - M - - - Psort location CytoplasmicMembrane, score 9.46
PAMMCEDC_03700 6.42e-101 - - - S - - - Domain of unknown function (DUF4252)
PAMMCEDC_03701 6.62e-117 - - - C - - - lyase activity
PAMMCEDC_03702 7.25e-118 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PAMMCEDC_03703 3.65e-109 - - - S - - - Domain of unknown function (DUF4252)
PAMMCEDC_03704 1.39e-171 - - - S - - - Oxidoreductase, short chain dehydrogenase reductase family protein
PAMMCEDC_03705 0.0 metZ 2.5.1.49 - E ko:K01740,ko:K10764 ko00270,ko00920,ko01100,map00270,map00920,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PAMMCEDC_03706 1.08e-102 - - - S ko:K07107 - ko00000,ko01000 acyl-CoA thioester hydrolase, YbgC YbaW family
PAMMCEDC_03707 0.0 - - - M ko:K21572 - ko00000,ko02000 Pfam:SusD
PAMMCEDC_03708 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_03709 2.33e-188 crnA 3.5.2.10 - S ko:K01470 ko00330,map00330 ko00000,ko00001,ko01000 Creatinine amidohydrolase
PAMMCEDC_03710 4.2e-286 - 1.1.1.1 - C ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 COG1454 Alcohol dehydrogenase class IV
PAMMCEDC_03711 2.37e-248 - - - M - - - Acyltransferase family
PAMMCEDC_03712 1.36e-288 - - - S ko:K07148 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03713 0.0 - - - IL - - - AAA domain
PAMMCEDC_03714 0.0 - - - G - - - Alpha-1,2-mannosidase
PAMMCEDC_03715 0.0 - 3.2.1.51 GH95 G ko:K15923 ko00511,map00511 ko00000,ko00001,ko01000 Glycosyl hydrolase family 65, N-terminal domain
PAMMCEDC_03716 0.0 xylE - - P ko:K02100,ko:K03444,ko:K08138 - ko00000,ko02000 Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PAMMCEDC_03717 0.0 - - - S - - - Tetratricopeptide repeat protein
PAMMCEDC_03718 0.0 - 3.2.1.20 GH31 E ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Glycosyl-hydrolase 97 C-terminal, oligomerisation
PAMMCEDC_03719 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_03720 0.0 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 alpha-galactosidase
PAMMCEDC_03721 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_03722 0.0 - - - S ko:K21572 - ko00000,ko02000 Pfam:SusD
PAMMCEDC_03723 1.1e-258 - 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Converts alpha-aldose to the beta-anomer
PAMMCEDC_03724 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PAMMCEDC_03725 0.0 - 3.1.1.53 - G ko:K05970 - ko00000,ko01000 Glycosyl hydrolase family 2, sugar binding domain protein
PAMMCEDC_03726 9.33e-223 - - - K - - - Transcriptional regulator, AraC family
PAMMCEDC_03727 0.0 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 alpha-galactosidase
PAMMCEDC_03728 0.0 - - - G - - - Glycosyl hydrolases family 43
PAMMCEDC_03729 3.21e-136 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PAMMCEDC_03730 8.51e-243 - - - PT - - - COG3712 Fe2 -dicitrate sensor, membrane component
PAMMCEDC_03731 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_03732 0.0 - - - S ko:K21572 - ko00000,ko02000 Pfam:SusD
PAMMCEDC_03733 1.1e-256 - - - E - - - Prolyl oligopeptidase family
PAMMCEDC_03734 6.2e-58 - - - S - - - Domain of unknown function (DUF4145)
PAMMCEDC_03735 2.67e-27 - - - - - - - -
PAMMCEDC_03736 6.86e-160 - - - - - - - -
PAMMCEDC_03737 1.03e-103 - - - - - - - -
PAMMCEDC_03738 4.38e-93 - - - S - - - COG NOG28168 non supervised orthologous group
PAMMCEDC_03739 1.39e-128 mgsA 4.2.3.3 - G ko:K01734 ko00640,ko01120,map00640,map01120 ko00000,ko00001,ko01000 methylglyoxal synthase
PAMMCEDC_03740 1.7e-200 - - - E - - - Belongs to the arginase family
PAMMCEDC_03741 0.0 glgP 2.4.1.1, 2.4.1.11, 2.4.1.8 GH65,GT3,GT35 G ko:K00688,ko:K00691,ko:K16153 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 ko00000,ko00001,ko01000,ko01003 Protein of unknown function (DUF3417)
PAMMCEDC_03742 0.0 - - - P ko:K03455 - ko00000 PTS system, fructose-specific IIABC component K02768 K02769
PAMMCEDC_03743 3.15e-231 pfkA 2.7.1.11 - F ko:K00850 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230 ko00000,ko00001,ko00002,ko01000,ko01009,ko03019 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PAMMCEDC_03744 4.43e-114 - - - K ko:K03088 - ko00000,ko03021 Sigma-70 region 2
PAMMCEDC_03745 2.58e-93 hsp20 - - O ko:K13993 ko04141,map04141 ko00000,ko00001,ko03110 Belongs to the small heat shock protein (HSP20) family
PAMMCEDC_03746 6.41e-185 gpmA 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PAMMCEDC_03747 2.7e-259 fbaB 4.1.2.13 - G ko:K11645 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 COG COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes
PAMMCEDC_03748 1.96e-108 ftnA 1.16.3.2 - P ko:K02217 - ko00000,ko01000 Iron-storage protein
PAMMCEDC_03749 2.4e-145 - - - U ko:K05595 - ko00000,ko02000 UPF0056 membrane protein
PAMMCEDC_03750 1.04e-138 - 1.16.3.2 - P ko:K02217 - ko00000,ko01000 Iron-storage protein
PAMMCEDC_03751 1.63e-16 - - - - - - - -
PAMMCEDC_03752 1.28e-73 - - - - - - - -
PAMMCEDC_03755 1.41e-59 - - - S - - - COG NOG30576 non supervised orthologous group
PAMMCEDC_03756 9.94e-90 - - - K - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_03757 2.44e-149 apbE 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PAMMCEDC_03758 3.08e-08 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_03760 4.89e-257 - - - L - - - Arm DNA-binding domain
PAMMCEDC_03762 1.27e-251 thiL 2.7.4.16 - H ko:K00946 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
PAMMCEDC_03763 1.24e-192 deoD 2.4.2.1 - F ko:K03783 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
PAMMCEDC_03764 5.82e-274 lpxK 2.7.1.130 - F ko:K00912 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA)
PAMMCEDC_03765 0.0 sppA - - OU ko:K04773 - ko00000,ko01000,ko01002 signal peptide peptidase SppA, 67K type
PAMMCEDC_03766 9.57e-145 - - - S ko:K07078 - ko00000 oxidoreductase related to nitroreductase
PAMMCEDC_03767 0.0 fkp - - S - - - GHMP kinase, N-terminal domain protein
PAMMCEDC_03768 1.87e-132 glxK 2.7.1.165 - G ko:K00865 ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130 ko00000,ko00001,ko01000 Belongs to the glycerate kinase type-1 family
PAMMCEDC_03769 3.22e-234 - - - P - - - Right handed beta helix region
PAMMCEDC_03770 0.0 rho - - K ko:K03628 ko03018,map03018 ko00000,ko00001,ko03019,ko03021 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PAMMCEDC_03771 3.87e-80 ridA 3.5.99.10 - J ko:K09022 - ko00000,ko01000 endoribonuclease L-PSP
PAMMCEDC_03772 6.45e-284 - - - T - - - COG NOG06399 non supervised orthologous group
PAMMCEDC_03773 2.83e-195 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_03774 5.93e-93 gloA 4.4.1.5 - E ko:K01759 ko00620,map00620 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_03775 2.96e-204 - - - S - - - COG NOG25193 non supervised orthologous group
PAMMCEDC_03776 0.0 yfmR - - S ko:K15738 - ko00000,ko02000 ABC transporter, ATP-binding protein
PAMMCEDC_03777 4.76e-288 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_03778 4.71e-201 - - - - - - - -
PAMMCEDC_03779 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03780 4.33e-281 - - - S - - - Glycosyl Hydrolase Family 88
PAMMCEDC_03781 1.85e-285 - - - C - - - Polysaccharide pyruvyl transferase
PAMMCEDC_03782 1.16e-288 - - - M - - - Glycosyl transferases group 1
PAMMCEDC_03783 6.03e-289 - - - - - - - -
PAMMCEDC_03784 3.73e-286 - - - M - - - Psort location Cytoplasmic, score
PAMMCEDC_03785 5.51e-38 - - - S - - - Glycosyltransferase like family 2
PAMMCEDC_03786 1.3e-140 - - - S - - - Glycosyltransferase like family 2
PAMMCEDC_03787 1.02e-168 - - - M - - - Glycosyl transferase family 2
PAMMCEDC_03788 7.47e-156 - - - E - - - haloacid dehalogenase-like hydrolase
PAMMCEDC_03789 1.19e-195 - - - - - - - -
PAMMCEDC_03790 1.25e-197 - - - S ko:K07011 - ko00000 Glycosyl transferase family 2
PAMMCEDC_03791 3e-250 - 5.1.3.26 - M ko:K19997 - ko00000,ko01000 Male sterility protein
PAMMCEDC_03792 5.1e-201 - - - S - - - Exopolysaccharide biosynthesis protein YbjH
PAMMCEDC_03793 0.0 - - - P ko:K07085 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03794 1.38e-136 - - - - - - - -
PAMMCEDC_03795 2.58e-41 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_03796 0.0 nrdA 1.17.4.1 - F ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PAMMCEDC_03797 1.07e-265 nrdB 1.17.4.1 - F ko:K00526 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PAMMCEDC_03798 3.55e-232 metF 1.5.1.20 - E ko:K00297 ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523 ko00000,ko00001,ko00002,ko01000 Methylenetetrahydrofolate reductase
PAMMCEDC_03799 0.0 - - - P ko:K16089 - ko00000,ko02000 COG4771 Outer membrane receptor for ferrienterochelin and colicins
PAMMCEDC_03800 4.17e-80 - - - - - - - -
PAMMCEDC_03801 0.0 - - - P ko:K16089 - ko00000,ko02000 COG4771 Outer membrane receptor for ferrienterochelin and colicins
PAMMCEDC_03802 7.27e-289 - - - P ko:K02016 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component
PAMMCEDC_03803 0.0 dxs2 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PAMMCEDC_03804 1.74e-221 - - - K - - - transcriptional regulator (AraC family)
PAMMCEDC_03805 1.55e-223 - - - K - - - transcriptional regulator (AraC family)
PAMMCEDC_03806 2.62e-197 yafP - - K ko:K03830 - ko00000,ko01000 Acetyltransferase (GNAT) domain
PAMMCEDC_03807 1.78e-264 - - - S - - - Protein of unknown function (DUF1016)
PAMMCEDC_03808 1.44e-121 - - - C - - - Flavodoxin
PAMMCEDC_03809 1.38e-132 - - - S - - - COG1853 Conserved protein domain typically associated with flavoprotein
PAMMCEDC_03810 0.0 cobJ 5.4.99.60, 5.4.99.61 - H ko:K06042 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko01000 COG1010 Precorrin-3B methylase
PAMMCEDC_03811 5.32e-286 cbiE 2.1.1.132 - H ko:K00595 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko01000 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
PAMMCEDC_03812 0.0 cobM 2.1.1.133, 2.1.1.271 - H ko:K05936 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko01000 COG2875 Precorrin-4 methylase
PAMMCEDC_03813 0.0 cbiD 2.1.1.195 - H ko:K02188 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko01000 Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
PAMMCEDC_03814 2.26e-242 fhuC 3.6.3.34 - HP ko:K02013 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components
PAMMCEDC_03815 1.73e-228 - - - P ko:K02015 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PAMMCEDC_03816 5.26e-281 - - - P ko:K02016 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component
PAMMCEDC_03817 1.14e-170 - 2.1.1.130, 2.1.1.151 - H ko:K03394 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko01000 COG2243 Precorrin-2 methylase
PAMMCEDC_03818 2.95e-92 - - - - - - - -
PAMMCEDC_03819 0.0 uxaB 1.1.1.17, 1.1.1.58 - C ko:K00009,ko:K00041 ko00040,ko00051,ko01100,map00040,map00051,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the mannitol dehydrogenase family. UxaB subfamily
PAMMCEDC_03820 0.0 uxaC 5.3.1.12 - G ko:K01812 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 glucuronate isomerase
PAMMCEDC_03821 4.99e-294 - - - CO - - - COG NOG23392 non supervised orthologous group
PAMMCEDC_03822 7.99e-226 - - - K - - - Transcriptional regulatory protein, C terminal
PAMMCEDC_03823 1.15e-196 vicX - - S - - - Metallo-beta-lactamase domain protein
PAMMCEDC_03827 1.15e-43 - - - - - - - -
PAMMCEDC_03828 1.21e-130 - - - S - - - COG NOG27239 non supervised orthologous group
PAMMCEDC_03829 7.72e-53 - - - - - - - -
PAMMCEDC_03830 0.0 - - - M - - - Outer membrane protein, OMP85 family
PAMMCEDC_03831 2.58e-176 aviRb - - J ko:K03437 - ko00000,ko03016 RNA methyltransferase, TrmH
PAMMCEDC_03832 6.4e-75 - - - - - - - -
PAMMCEDC_03833 7.78e-235 - - - S - - - COG NOG25370 non supervised orthologous group
PAMMCEDC_03834 2.15e-151 lspA 3.4.23.36 - MU ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PAMMCEDC_03835 5.93e-80 yocK - - T - - - RNA polymerase-binding protein DksA
PAMMCEDC_03836 0.0 ileS 6.1.1.5 - J ko:K01870 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PAMMCEDC_03837 2.15e-197 - - - K - - - Helix-turn-helix domain
PAMMCEDC_03838 9.72e-187 loiP - - M ko:K07387 - ko00000,ko01000,ko01002 COG0501 Zn-dependent protease with chaperone function
PAMMCEDC_03839 1.77e-165 eda 4.1.2.14, 4.1.3.42 - G ko:K01625 ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 KDPG and KHG aldolase
PAMMCEDC_03840 1.8e-248 - 2.7.1.45 - G ko:K00874 ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Kinase, PfkB family
PAMMCEDC_03841 1.16e-264 - - - K ko:K02529 - ko00000,ko03000 Psort location Cytoplasmic, score
PAMMCEDC_03842 0.0 uxaA 4.2.1.42, 4.2.1.7 - G ko:K01685,ko:K01708 ko00040,ko00053,ko01100,map00040,map00053,map01100 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_03843 1.02e-297 mleN - - C ko:K03315 - ko00000,ko02000 Na H antiporter
PAMMCEDC_03844 2.06e-198 - - - S - - - Domain of unknown function (DUF4373)
PAMMCEDC_03845 3.47e-54 - - - S - - - COG NOG18433 non supervised orthologous group
PAMMCEDC_03846 6.64e-139 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03847 0.0 - - - P ko:K03305 - ko00000 amino acid peptide transporter
PAMMCEDC_03848 2.38e-114 ybaK - - H ko:K03976 - ko00000,ko01000,ko03016 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PAMMCEDC_03849 0.0 uvrA2 - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PAMMCEDC_03850 0.0 lysM - - M - - - LysM domain
PAMMCEDC_03851 6.39e-165 - - - M - - - Outer membrane protein beta-barrel domain
PAMMCEDC_03852 6.95e-95 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_03853 9.69e-72 rpoZ - - S - - - Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PAMMCEDC_03854 6.38e-195 yfiO - - S ko:K05807 - ko00000,ko02000 outer membrane assembly lipoprotein YfiO
PAMMCEDC_03855 0.0 uvrB - - L ko:K03702 ko03420,map03420 ko00000,ko00001,ko03400 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PAMMCEDC_03856 9.62e-247 - - - P - - - phosphate-selective porin
PAMMCEDC_03857 1.7e-133 yigZ - - S - - - YigZ family
PAMMCEDC_03858 2.76e-120 - 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 COG0847 DNA polymerase III epsilon subunit and related 3'-5'
PAMMCEDC_03859 0.0 - - - M ko:K07001 - ko00000 Phospholipase, patatin family
PAMMCEDC_03860 9.64e-293 uxuA 4.2.1.8 - H ko:K01686 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the dehydration of D-mannonate
PAMMCEDC_03861 0.0 pulA 3.2.1.41 CBM48,GH13 G ko:K01200 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 13 family
PAMMCEDC_03862 8.94e-135 ruvC 3.1.22.4 - L ko:K01159 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
PAMMCEDC_03863 2.21e-70 - - - S - - - COG NOG30624 non supervised orthologous group
PAMMCEDC_03866 1.79e-46 - - - - - - - -
PAMMCEDC_03867 2.33e-242 - - - S ko:K07504 - ko00000 Type I restriction enzyme HsdR protein
PAMMCEDC_03868 8.11e-152 - - - - - - - -
PAMMCEDC_03869 4.19e-16 - - - - - - - -
PAMMCEDC_03873 4e-40 - - - - - - - -
PAMMCEDC_03874 7.5e-83 - - - K - - - helix_turn_helix, Lux Regulon
PAMMCEDC_03875 2.07e-65 - - - - - - - -
PAMMCEDC_03876 4.97e-220 - - - S - - - AAA domain
PAMMCEDC_03877 3.73e-200 - - - - - - - -
PAMMCEDC_03878 7.73e-89 - - - - - - - -
PAMMCEDC_03879 2.22e-145 - - - - - - - -
PAMMCEDC_03880 0.0 - - - L - - - SNF2 family N-terminal domain
PAMMCEDC_03881 8.28e-84 - - - S - - - VRR_NUC
PAMMCEDC_03882 2.79e-177 - - - L - - - DnaD domain protein
PAMMCEDC_03883 1.27e-82 - - - - - - - -
PAMMCEDC_03884 9.43e-90 - - - S - - - PcfK-like protein
PAMMCEDC_03885 0.0 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_03886 0.0 - - - KL - - - DNA methylase
PAMMCEDC_03891 8.8e-13 - - - S - - - Protein of unknown function (DUF551)
PAMMCEDC_03892 2.17e-85 - - - S - - - ASCH domain
PAMMCEDC_03895 4.41e-29 - - - K - - - Cro/C1-type HTH DNA-binding domain
PAMMCEDC_03896 3.36e-53 - - - - - - - -
PAMMCEDC_03898 3.28e-36 - - - - - - - -
PAMMCEDC_03899 9.17e-13 - - - L - - - MutS domain I
PAMMCEDC_03900 1.65e-40 - - - S - - - Domain of unknown function, B. Theta Gene description (DUF3873)
PAMMCEDC_03901 3.58e-66 - - - - - - - -
PAMMCEDC_03902 1.93e-137 - - - K - - - ParB-like nuclease domain
PAMMCEDC_03903 0.0 - - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 chromosome segregation
PAMMCEDC_03904 2.6e-134 - - - S - - - DNA-packaging protein gp3
PAMMCEDC_03905 0.0 - - - S - - - Phage terminase large subunit
PAMMCEDC_03906 1.06e-123 - - - - - - - -
PAMMCEDC_03907 2.06e-107 - - - - - - - -
PAMMCEDC_03908 4.62e-107 - - - - - - - -
PAMMCEDC_03909 1.04e-270 - - - - - - - -
PAMMCEDC_03910 0.0 - - - - - - - -
PAMMCEDC_03911 0.0 - - - S - - - domain protein
PAMMCEDC_03912 9.36e-48 - - - - - - - -
PAMMCEDC_03913 3.08e-265 - 3.4.21.92 - OU ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Clp protease
PAMMCEDC_03914 1.2e-265 - - - - - - - -
PAMMCEDC_03915 1.92e-140 - - - - - - - -
PAMMCEDC_03916 9.25e-134 - - - - - - - -
PAMMCEDC_03917 4.57e-288 - - - - - - - -
PAMMCEDC_03918 1.51e-108 - - - - - - - -
PAMMCEDC_03919 0.0 - - - S - - - Phage minor structural protein
PAMMCEDC_03922 1.24e-188 tagO - - M - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03923 4.94e-40 - - - - - - - -
PAMMCEDC_03924 5.22e-231 - - - S - - - Exopolysaccharide biosynthesis protein YbjH
PAMMCEDC_03925 2.42e-96 - - - - - - - -
PAMMCEDC_03926 0.0 - - - H - - - COG NOG08812 non supervised orthologous group
PAMMCEDC_03927 0.0 - - - L - - - helicase
PAMMCEDC_03928 9.87e-191 yafV 3.5.1.3 - S ko:K13566 ko00250,map00250 ko00000,ko00001,ko01000 hydrolase, carbon-nitrogen family
PAMMCEDC_03929 0.0 iorA 1.2.7.8 - C ko:K00179 - br01601,ko00000,ko01000 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates
PAMMCEDC_03930 1.42e-133 iorB 1.2.7.8 - C ko:K00180 - br01601,ko00000,ko01000 COG1014 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin
PAMMCEDC_03931 1.53e-315 alaC - - E - - - Aminotransferase, class I II
PAMMCEDC_03932 9.94e-309 - 6.2.1.30 - H ko:K01912 ko00360,ko01120,ko05111,map00360,map01120,map05111 ko00000,ko00001,ko01000 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
PAMMCEDC_03933 9.11e-92 - - - S - - - ACT domain protein
PAMMCEDC_03934 0.0 hppA 3.6.1.1 - C ko:K15987 ko00190,map00190 ko00000,ko00001,ko01000 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane
PAMMCEDC_03935 3.4e-296 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_03936 2.88e-316 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_03937 4.26e-69 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_03938 1.65e-66 - - - K - - - tryptophan synthase beta chain K06001
PAMMCEDC_03939 2.26e-65 - - - S - - - Helix-turn-helix domain
PAMMCEDC_03940 3.45e-100 - - - H - - - Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PAMMCEDC_03941 1.19e-313 - - - T ko:K07713 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Psort location Cytoplasmic, score
PAMMCEDC_03942 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_03943 0.0 - - - L - - - Helicase associated domain
PAMMCEDC_03944 0.0 - 2.7.7.13 - M ko:K00971 ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Nucleotidyl transferase
PAMMCEDC_03945 2.06e-234 fcl 1.1.1.271 - GM ko:K02377 ko00051,ko00520,ko01100,map00051,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction
PAMMCEDC_03946 4.76e-271 gmd 4.2.1.47 - M ko:K01711 ko00051,ko00520,ko01100,map00051,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
PAMMCEDC_03947 1.06e-189 wbyL - - M - - - Glycosyltransferase, group 2 family protein
PAMMCEDC_03948 3.81e-134 - - - H ko:K03818 - ko00000,ko01000 Bacterial transferase hexapeptide (six repeats)
PAMMCEDC_03949 4.32e-281 - - - M - - - Glycosyl transferases group 1
PAMMCEDC_03950 5.48e-235 - - - M - - - Glycosyl transferases group 1
PAMMCEDC_03951 0.0 - - - - - - - -
PAMMCEDC_03952 1.01e-276 - - - - - - - -
PAMMCEDC_03953 8.13e-266 - - - H - - - Glycosyl transferases group 1
PAMMCEDC_03955 2.48e-254 - - - S - - - Glycosyl transferases group 1
PAMMCEDC_03956 7.89e-245 - - - M - - - Glycosyltransferase
PAMMCEDC_03957 2.42e-237 - - - GM ko:K19431 - ko00000,ko01000 Polysaccharide pyruvyl transferase
PAMMCEDC_03958 4.74e-269 - - - S - - - radical SAM domain protein
PAMMCEDC_03959 0.0 - - - V - - - COG NOG25117 non supervised orthologous group
PAMMCEDC_03960 4.01e-102 - - - I - - - Acyltransferase family
PAMMCEDC_03961 7.91e-80 - - - I - - - Acyltransferase family
PAMMCEDC_03962 2.88e-311 wbpO 1.1.1.136 - M ko:K02474,ko:K13015 ko00520,map00520 ko00000,ko00001,ko01000,ko01005 Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PAMMCEDC_03963 3.1e-63 - - - - - - - -
PAMMCEDC_03964 4.49e-169 - - - GM - - - COG4464 Capsular polysaccharide biosynthesis protein
PAMMCEDC_03965 0.0 - - - DM - - - Chain length determinant protein
PAMMCEDC_03966 9e-184 - - - M ko:K01991 ko02026,map02026 ko00000,ko00001,ko02000 COG1596 Periplasmic protein involved in polysaccharide export
PAMMCEDC_03967 2.16e-272 wecA - - M - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_03968 1.34e-126 - - - K - - - Transcription termination factor nusG
PAMMCEDC_03969 1.34e-202 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_03970 2.83e-11 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_03971 2.46e-127 - - - S - - - Hexapeptide repeat of succinyl-transferase
PAMMCEDC_03972 8.14e-120 - - - I - - - sulfurtransferase activity
PAMMCEDC_03973 2.02e-43 - 5.3.2.6 - G ko:K01821 ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220 ko00000,ko00001,ko00002,ko01000 Tautomerase enzyme
PAMMCEDC_03974 2.17e-209 - - - S - - - aldo keto reductase family
PAMMCEDC_03975 1.2e-237 - - - S - - - Flavin reductase like domain
PAMMCEDC_03976 9.82e-283 - - - C - - - aldo keto reductase
PAMMCEDC_03977 3.73e-44 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_03978 2.56e-292 purH2 2.1.2.3, 3.5.4.10 - F ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 ko00000,ko00001,ko00002,ko01000,ko04147 COG0138 AICAR transformylase IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
PAMMCEDC_03979 8.51e-159 - - - M - - - COG NOG19089 non supervised orthologous group
PAMMCEDC_03980 1.25e-140 - - - M - - - Outer membrane protein beta-barrel domain
PAMMCEDC_03981 6.37e-125 - - - M - - - Outer membrane protein beta-barrel domain
PAMMCEDC_03982 1.85e-36 - - - - - - - -
PAMMCEDC_03983 1.16e-148 nlpD_2 - - M - - - COG COG0739 Membrane proteins related to metalloendopeptidases
PAMMCEDC_03984 4.87e-156 - - - S - - - B3 4 domain protein
PAMMCEDC_03985 1.84e-194 - - - S ko:K05810 - ko00000,ko01000 Belongs to the multicopper oxidase YfiH RL5 family
PAMMCEDC_03986 3.21e-267 obg - - S ko:K03979 - ko00000,ko01000,ko03009 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PAMMCEDC_03987 3.36e-130 adk 2.7.4.3 - F ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PAMMCEDC_03988 1.76e-122 hpt 2.4.2.8 - F ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the purine pyrimidine phosphoribosyltransferase family
PAMMCEDC_03989 0.0 nnrD 4.2.1.136, 5.1.99.6 - H ko:K17758,ko:K17759 - ko00000,ko01000 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PAMMCEDC_03990 3.79e-250 - - - S - - - Domain of unknown function (DUF4831)
PAMMCEDC_03991 0.0 - - - G - - - Transporter, major facilitator family protein
PAMMCEDC_03992 7.67e-124 - - - S - - - COG NOG23374 non supervised orthologous group
PAMMCEDC_03993 2.63e-306 - - - S - - - protein BT3056 SWALL AAO78162 (EMBL AE016938) (409 aa) fasta scores E()
PAMMCEDC_03994 3.64e-316 - - - MU - - - Efflux transporter, outer membrane factor lipoprotein, NodT family
PAMMCEDC_03995 0.0 - - - V ko:K03296 - ko00000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAMMCEDC_03996 5.12e-255 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAMMCEDC_03997 9.12e-199 thiD 2.7.1.49, 2.7.4.7 - K ko:K00941 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 transcriptional regulator (AraC family)
PAMMCEDC_03998 1.03e-229 fba 4.1.2.13 - G ko:K01624 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PAMMCEDC_03999 2.12e-145 - - - S - - - ATPase domain predominantly from Archaea
PAMMCEDC_04000 9.47e-151 - - - - - - - -
PAMMCEDC_04001 0.0 - - - GM ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_04002 0.0 - - - P - - - Carboxypeptidase regulatory-like domain
PAMMCEDC_04003 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
PAMMCEDC_04004 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PAMMCEDC_04006 0.0 glnA 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 Glutamate--ammonia ligase, catalytic domain protein
PAMMCEDC_04007 0.0 ramA_2 - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_04008 1.8e-292 zraS_1 - - T - - - PAS domain
PAMMCEDC_04009 0.0 - - - T - - - COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains
PAMMCEDC_04010 5e-310 - - - MU ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 outer membrane efflux protein
PAMMCEDC_04011 1.36e-247 - - - M ko:K02005 - ko00000 Efflux transporter, RND family, MFP subunit
PAMMCEDC_04012 8.29e-161 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PAMMCEDC_04013 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter, permease protein
PAMMCEDC_04014 1.96e-27 - - - H ko:K02014 - ko00000,ko02000 COG COG4771 Outer membrane receptor for ferrienterochelin and colicins
PAMMCEDC_04016 3.17e-54 - - - S - - - TSCPD domain
PAMMCEDC_04017 7.45e-178 yebC - - K - - - Transcriptional regulatory protein
PAMMCEDC_04018 0.0 pheT 6.1.1.20 - J ko:K01890 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Psort location Cytoplasmic, score
PAMMCEDC_04019 0.0 dnaB 3.6.4.12 - L ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Participates in initiation and elongation during chromosome replication
PAMMCEDC_04020 3.31e-200 ispE 2.7.1.148 - F ko:K00919 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PAMMCEDC_04021 0.0 - - - L - - - DNA-dependent ATPase I and helicase II
PAMMCEDC_04022 0.0 addA - - L - - - Belongs to the helicase family. UvrD subfamily
PAMMCEDC_04023 2.47e-309 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAMMCEDC_04024 0.0 zraR_2 - - T - - - COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains
PAMMCEDC_04025 3.69e-129 bsaA 1.11.1.9 - O ko:K00432 ko00480,ko00590,ko04918,map00480,map00590,map04918 ko00000,ko00001,ko01000 Belongs to the glutathione peroxidase family
PAMMCEDC_04027 7.4e-126 - - - K - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_04028 5.39e-84 - - - - - - - -
PAMMCEDC_04029 3.63e-46 - - - - - - - -
PAMMCEDC_04030 5.11e-65 - - - S - - - IS66 Orf2 like protein
PAMMCEDC_04032 3.12e-100 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_04033 9.47e-35 - - - M - - - Capsular polysaccharide synthesis protein
PAMMCEDC_04036 4.46e-211 - - - H - - - Flavin containing amine oxidoreductase
PAMMCEDC_04038 7.89e-55 - - - S - - - Bacterial transferase hexapeptide repeat protein
PAMMCEDC_04039 4.2e-122 - - - M - - - Glycosyltransferase, group 1 family protein
PAMMCEDC_04040 7.3e-80 - - - E - - - haloacid dehalogenase-like hydrolase
PAMMCEDC_04041 3.05e-103 - - - M - - - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
PAMMCEDC_04042 6.83e-98 - 5.1.1.13 - M ko:K01779 ko00250,ko01054,map00250,map01054 ko00000,ko00001,ko01000 racemase activity, acting on amino acids and derivatives
PAMMCEDC_04043 4.37e-133 - - - M - - - CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PAMMCEDC_04044 6.06e-175 - - - M - - - Glycosyl transferases group 1
PAMMCEDC_04045 2.59e-169 - 2.4.1.304 GT26 M ko:K21364 - ko00000,ko01000,ko01003,ko01005 Belongs to the glycosyltransferase 26 family
PAMMCEDC_04047 2.37e-218 - - - S - - - Exopolysaccharide biosynthesis protein YbjH
PAMMCEDC_04048 7.03e-292 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_04049 0.0 - 3.4.15.5 - E ko:K01284 - ko00000,ko01000,ko01002 Peptidase family M3
PAMMCEDC_04050 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_04051 6.86e-154 - - - V ko:K02003 - ko00000,ko00002,ko02000 bacteriocin export ABC transporter, lactococcin 972 group
PAMMCEDC_04052 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_04053 2.56e-108 - - - - - - - -
PAMMCEDC_04054 0.0 - 3.4.13.19 - E ko:K01273,ko:K01274 - ko00000,ko00537,ko01000,ko01002,ko04147 Renal dipeptidase family protein
PAMMCEDC_04055 0.0 ppdK 2.7.9.1 - G ko:K01006 ko00620,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00710,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the PEP-utilizing enzyme family
PAMMCEDC_04056 0.0 rumA 2.1.1.190 - H ko:K03215 - ko00000,ko01000,ko03009 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PAMMCEDC_04057 3.37e-221 rluD 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
PAMMCEDC_04058 0.0 pop - - EU - - - Peptidase, S9A B C family, catalytic domain protein
PAMMCEDC_04059 0.0 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins
PAMMCEDC_04060 0.0 pyrG 6.3.4.2 - F ko:K01937 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PAMMCEDC_04061 0.0 - - - M - - - Protein of unknown function (DUF3078)
PAMMCEDC_04062 1.29e-259 wecB 5.1.3.14 - M ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 ko00000,ko00001,ko00002,ko01000,ko01005 Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PAMMCEDC_04063 2.43e-144 yadS - - S - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_04064 1.66e-117 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PAMMCEDC_04065 0.0 - 6.4.1.1 - C ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 ko00000,ko00001,ko00002,ko01000 COG5016 Pyruvate oxaloacetate carboxyltransferase
PAMMCEDC_04066 9.21e-212 - - - G - - - Protein of unknown function (DUF1460)
PAMMCEDC_04067 9.77e-171 mtgA 2.4.1.129 GT51 M ko:K03814 ko00550,map00550 ko00000,ko00001,ko01000,ko01003,ko01011 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
PAMMCEDC_04068 2.19e-130 - - - M - - - COG2885 Outer membrane protein and related peptidoglycan-associated
PAMMCEDC_04069 0.0 - - - V - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_04070 2.21e-313 glyA 2.1.2.1 - E ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PAMMCEDC_04071 2.59e-170 - - - S - - - COG NOG27381 non supervised orthologous group
PAMMCEDC_04072 6.03e-145 - - - S - - - COG COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
PAMMCEDC_04073 3.85e-108 pyrI - - F ko:K00610 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002 Involved in allosteric regulation of aspartate carbamoyltransferase
PAMMCEDC_04074 8.97e-224 pyrB 2.1.3.2 - F ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
PAMMCEDC_04075 0.0 mrcA 2.4.1.129, 3.4.16.4 GT51 M ko:K05366 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 COG5009 Membrane carboxypeptidase penicillin-binding protein
PAMMCEDC_04076 2.33e-200 - - - S - - - COG NOG24904 non supervised orthologous group
PAMMCEDC_04077 4.33e-154 tal 2.2.1.2 - F ko:K00616,ko:K08314 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PAMMCEDC_04078 2.36e-249 - - - V ko:K01992 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_04079 1.4e-241 ybhS - - V ko:K01992 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_04080 0.0 - - - G ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PAMMCEDC_04081 2.14e-203 - - - M ko:K01993 - ko00000 COG COG0845 Membrane-fusion protein
PAMMCEDC_04082 1.92e-301 - - - MU - - - COG NOG26656 non supervised orthologous group
PAMMCEDC_04083 1.4e-139 - - - K - - - Bacterial regulatory proteins, tetR family
PAMMCEDC_04084 4.04e-86 folK2 2.7.6.3 - H ko:K00950 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
PAMMCEDC_04085 3.03e-180 kdsB 2.7.7.38 - H ko:K00979 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
PAMMCEDC_04086 5.44e-315 - - - S - - - Peptidase M16 inactive domain
PAMMCEDC_04087 8.26e-21 - 2.7.11.1 - S ko:K12132 - ko00000,ko01000,ko01001 phosphatidylinositol-4-phosphate 5-kinase family protein K00889
PAMMCEDC_04088 3.29e-189 suhB 3.1.3.25 - G ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PAMMCEDC_04089 5.71e-165 - - - S - - - TIGR02453 family
PAMMCEDC_04090 1.6e-98 - - - G - - - Domain of unknown function (DUF386)
PAMMCEDC_04091 0.0 glgB 2.4.1.18 CBM48,GH13 G ko:K00700 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 1,4-alpha-glucan branching enzyme
PAMMCEDC_04092 4.32e-280 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PAMMCEDC_04093 0.0 proS 6.1.1.15 - J ko:K01881 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro)
PAMMCEDC_04094 7.46e-157 - 3.6.3.21 - V ko:K02028,ko:K02068 - ko00000,ko00002,ko01000,ko02000 ABC transporter
PAMMCEDC_04095 8.27e-180 - - - S ko:K02069 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_04096 1.7e-63 - - - - - - - -
PAMMCEDC_04097 2.84e-264 yqfO - - C - - - Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PAMMCEDC_04098 1.96e-124 - - - S ko:K07164 - ko00000 Zinc ribbon domain protein
PAMMCEDC_04099 5.23e-90 - - - V - - - COG NOG14438 non supervised orthologous group
PAMMCEDC_04100 1.7e-189 amn 3.2.2.4 - F ko:K01241 ko00230,map00230 ko00000,ko00001,ko01000 COG COG0775 Nucleoside phosphorylase
PAMMCEDC_04101 6.19e-239 holA 2.7.7.7 - L ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 COG1466 DNA polymerase III, delta subunit
PAMMCEDC_04103 4.77e-94 - - - K - - - COG NOG19093 non supervised orthologous group
PAMMCEDC_04104 2.61e-198 pyrK - - C ko:K02823 ko00240,ko01100,map00240,map01100 ko00000,ko00001 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
PAMMCEDC_04105 2.1e-217 pyrD 1.3.1.14, 1.3.98.1 - F ko:K00226,ko:K17828 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PAMMCEDC_04106 1.29e-158 trmD 2.1.1.228 - J ko:K00554 - ko00000,ko01000,ko03016 Belongs to the RNA methyltransferase TrmD family
PAMMCEDC_04107 0.0 ligA 6.5.1.2 - L ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 ko00000,ko00001,ko01000,ko03032,ko03400 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PAMMCEDC_04108 1.43e-203 dapA 4.3.3.7 - EM ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PAMMCEDC_04111 0.0 - - - P - - - Psort location OuterMembrane, score
PAMMCEDC_04112 0.0 - - - S - - - Susd and RagB outer membrane lipoprotein
PAMMCEDC_04113 3.71e-193 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_04114 1.06e-119 - 3.1.21.3 - L ko:K01154 - ko00000,ko01000,ko02048 Type I restriction modification DNA specificity domain
PAMMCEDC_04115 7.6e-302 - - - L - - - helicase
PAMMCEDC_04116 5.75e-141 engB - - D ko:K03978 - ko00000,ko03036 Necessary for normal cell division and for the maintenance of normal septation
PAMMCEDC_04117 0.0 - - - E - - - Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PAMMCEDC_04118 1.77e-142 recR - - L ko:K06187 ko03440,map03440 ko00000,ko00001,ko03400 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PAMMCEDC_04119 5.86e-99 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_04120 2.41e-129 speG 2.3.1.57 - J ko:K00657 ko00330,ko01100,ko04216,map00330,map01100,map04216 ko00000,ko00001,ko00002,ko01000 Acetyltransferase, gnat family
PAMMCEDC_04121 1.37e-146 - - - K ko:K07735 - ko00000,ko03000 Belongs to the UPF0301 (AlgH) family
PAMMCEDC_04123 1.88e-272 - - - L - - - Arm DNA-binding domain
PAMMCEDC_04124 5.46e-193 - - - L - - - Phage integrase family
PAMMCEDC_04125 1.95e-312 wzc - - D ko:K16692 - ko00000,ko01000,ko01001 protein tyrosine kinase activity
PAMMCEDC_04126 9.63e-64 - - - - - - - -
PAMMCEDC_04127 3.45e-14 - - - S - - - YopX protein
PAMMCEDC_04132 9.25e-30 - - - - - - - -
PAMMCEDC_04135 3.13e-26 - - - - - - - -
PAMMCEDC_04136 2.16e-207 - - - - - - - -
PAMMCEDC_04140 1.2e-118 - - - - - - - -
PAMMCEDC_04142 0.0 - - - S ko:K06919 - ko00000 Phage plasmid primase, P4 family domain protein
PAMMCEDC_04145 8.84e-93 - - - - - - - -
PAMMCEDC_04146 1.57e-187 - - - - - - - -
PAMMCEDC_04149 0.0 - - - S - - - Terminase-like family
PAMMCEDC_04159 7.13e-134 - - - - - - - -
PAMMCEDC_04160 3.64e-86 - - - - - - - -
PAMMCEDC_04161 3.36e-291 - - - - - - - -
PAMMCEDC_04162 1.3e-82 - - - - - - - -
PAMMCEDC_04163 2.23e-75 - - - - - - - -
PAMMCEDC_04165 3.26e-88 - - - - - - - -
PAMMCEDC_04166 9.27e-127 - - - - - - - -
PAMMCEDC_04167 1.52e-108 - - - - - - - -
PAMMCEDC_04168 0.0 - - - S - - - tape measure
PAMMCEDC_04169 1.02e-108 - - - - - - - -
PAMMCEDC_04170 4.96e-59 - - - S ko:K07741 - ko00000 Phage regulatory protein Rha (Phage_pRha)
PAMMCEDC_04171 5.61e-142 - - - S - - - KilA-N domain
PAMMCEDC_04176 2.74e-122 - - - - - - - -
PAMMCEDC_04177 0.0 - - - S - - - Phage minor structural protein
PAMMCEDC_04178 5.14e-288 - - - - - - - -
PAMMCEDC_04180 2.16e-240 - - - - - - - -
PAMMCEDC_04181 1.29e-314 - - - - - - - -
PAMMCEDC_04182 5.49e-197 - - - L - - - Reverse transcriptase (RNA-dependent DNA polymerase)
PAMMCEDC_04184 4.35e-79 - - - L - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_04185 1.88e-83 - - - - - - - -
PAMMCEDC_04186 3.11e-293 - - - S - - - Phage minor structural protein
PAMMCEDC_04187 1.51e-57 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_04188 4.66e-100 - - - - - - - -
PAMMCEDC_04189 1.4e-95 - - - - - - - -
PAMMCEDC_04191 8.27e-130 - - - - - - - -
PAMMCEDC_04192 9.31e-26 - - - L - - - Domain of unknown function (DUF3127)
PAMMCEDC_04196 2.53e-123 - - - - - - - -
PAMMCEDC_04198 2.72e-300 rtcB 6.5.1.3 - S ko:K14415 - ko00000,ko01000,ko03016 tRNA-splicing ligase RtcB
PAMMCEDC_04200 8.27e-59 - - - - - - - -
PAMMCEDC_04201 3.15e-25 - - - S - - - DNA N-6-adenine-methyltransferase (Dam)
PAMMCEDC_04202 1.5e-44 - - - - - - - -
PAMMCEDC_04203 8.02e-131 - - - C - - - radical SAM domain protein
PAMMCEDC_04204 2.05e-34 - - - C - - - radical SAM domain protein
PAMMCEDC_04205 3.56e-87 - - - S - - - Protein of unknown function (DUF551)
PAMMCEDC_04210 1.09e-82 - - - S - - - Protein of unknown function (DUF2829)
PAMMCEDC_04211 3.02e-144 - - - EH - - - Phosphoadenosine phosphosulfate reductase family
PAMMCEDC_04214 1.54e-31 - - - - - - - -
PAMMCEDC_04215 4.72e-128 - - - - - - - -
PAMMCEDC_04216 2.42e-178 - - - L - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_04217 9.39e-134 - - - - - - - -
PAMMCEDC_04219 1.49e-238 - - - H - - - C-5 cytosine-specific DNA methylase
PAMMCEDC_04220 3.04e-132 - - - - - - - -
PAMMCEDC_04221 6.05e-33 - - - - - - - -
PAMMCEDC_04222 2.25e-105 - - - - - - - -
PAMMCEDC_04224 4.5e-164 - - - O - - - SPFH Band 7 PHB domain protein
PAMMCEDC_04225 2.78e-169 - - - - - - - -
PAMMCEDC_04226 1.3e-58 - - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 bacterial (prokaryotic) histone like domain
PAMMCEDC_04227 3.82e-95 - - - - - - - -
PAMMCEDC_04231 3.4e-202 - - - L ko:K07455 - ko00000,ko03400 RecT family
PAMMCEDC_04234 1.19e-50 - - - S - - - Helix-turn-helix domain
PAMMCEDC_04236 4.82e-179 - - - K - - - Transcriptional regulator
PAMMCEDC_04237 1.6e-75 - - - - - - - -
PAMMCEDC_04238 0.0 - - - T - - - COG COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain
PAMMCEDC_04239 0.0 - 3.2.1.51 GH95 G ko:K15923 ko00511,map00511 ko00000,ko00001,ko01000 COG NOG04001 non supervised orthologous group
PAMMCEDC_04240 4.16e-178 ric - - C ko:K07322 - ko00000 Di-iron-containing protein involved in the repair of iron-sulfur clusters
PAMMCEDC_04241 0.0 hcp 1.7.99.1 - C ko:K05601 ko00910,map00910 ko00000,ko00001,ko01000 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O
PAMMCEDC_04242 1.26e-133 - - - K - - - - catabolite gene activator and regulatory subunit of cAMP-dependent protein
PAMMCEDC_04243 0.0 - - - P - - - COG COG3119 Arylsulfatase A and related enzymes
PAMMCEDC_04244 1.06e-181 - - - S - - - COG NOG29298 non supervised orthologous group
PAMMCEDC_04245 5.9e-160 - - - K - - - COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PAMMCEDC_04246 2e-301 qseC - - T - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_04247 9.67e-104 - - - S - - - COG NOG14442 non supervised orthologous group
PAMMCEDC_04248 4.37e-201 - - - S - - - Calcineurin-like phosphoesterase superfamily domain
PAMMCEDC_04249 2.81e-281 - - - M - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_04250 0.0 ppk 2.7.4.1 - H ko:K00937 ko00190,ko03018,map00190,map03018 ko00000,ko00001,ko01000,ko03019 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PAMMCEDC_04251 1.41e-211 ppx 3.6.1.11, 3.6.1.40 - FP ko:K01524 ko00230,map00230 ko00000,ko00001,ko01000 Ppx GppA phosphatase family
PAMMCEDC_04252 0.0 - - - S - - - Peptidase family M28
PAMMCEDC_04253 0.0 atpD 3.6.3.14 - C ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PAMMCEDC_04254 2.28e-53 atpC - - C ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 ATP synthase, delta epsilon subunit, beta-sandwich domain protein
PAMMCEDC_04255 8.76e-85 - - - S - - - Psort location CytoplasmicMembrane, score
PAMMCEDC_04256 3.29e-258 atpB - - C ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko03110 it plays a direct role in the translocation of protons across the membrane
PAMMCEDC_04257 8.66e-40 atpE - - C ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PAMMCEDC_04258 6.14e-83 atpF - - C ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PAMMCEDC_04259 3.11e-124 atpH - - C ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PAMMCEDC_04260 0.0 atpA 3.6.3.14 - C ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PAMMCEDC_04261 3.42e-200 atpG - - C ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PAMMCEDC_04262 4.49e-178 cypM_1 - - H - - - Methyltransferase domain protein
PAMMCEDC_04263 0.0 ravA_1 - - S ko:K03924 - ko00000,ko01000 ATPase family associated with various cellular activities (AAA)
PAMMCEDC_04264 6.56e-306 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_04265 7.56e-290 - - - P ko:K07221 - ko00000,ko02000 Phosphate-selective porin O and P
PAMMCEDC_04266 3.91e-270 phnW 2.6.1.37 - E ko:K03430 ko00440,ko01100,ko01120,map00440,map01100,map01120 ko00000,ko00001,ko01000,ko01007 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily
PAMMCEDC_04267 2.32e-189 phnX 3.11.1.1 - S ko:K05306 ko00440,ko01100,ko01120,map00440,map01100,map01120 ko00000,ko00001,ko01000 Belongs to the HAD-like hydrolase superfamily. PhnX family
PAMMCEDC_04268 9.2e-317 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_04269 3.75e-210 - - - - - - - -
PAMMCEDC_04270 0.0 helD 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 COG COG3973 Superfamily I DNA and RNA helicases
PAMMCEDC_04271 1.83e-234 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_04272 0.0 - - - D - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_04273 7.32e-136 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_04274 3.9e-264 - - - S - - - Psort location Cytoplasmic, score 8.96
PAMMCEDC_04275 1.65e-288 - - - C ko:K19955 - ko00000,ko01000 Psort location Cytoplasmic, score
PAMMCEDC_04276 0.0 fhs 6.3.4.3 - F ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Formyltetrahydrofolate synthetase
PAMMCEDC_04277 4.63e-48 - - - - - - - -
PAMMCEDC_04278 0.0 - - - E - - - Peptidase, S9A B C family, catalytic domain protein
PAMMCEDC_04279 0.0 gcvP 1.4.4.2 - E ko:K00281,ko:K00283 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 ko00000,ko00001,ko00002,ko01000 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PAMMCEDC_04280 2.16e-160 - - - P - - - Psort location Cytoplasmic, score
PAMMCEDC_04281 2.16e-149 rsmG 2.1.1.170 - J ko:K03501 - ko00000,ko01000,ko03009,ko03036 Specifically methylates the N7 position of a guanine in 16S rRNA
PAMMCEDC_04282 1.78e-203 - - - S - - - Domain of unknown function (DUF4163)
PAMMCEDC_04283 0.0 copA 3.6.3.4, 3.6.3.54 - P ko:K01533,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 Psort location CytoplasmicMembrane, score 10.00
PAMMCEDC_04284 6.87e-131 - - - S - - - COG NOG28927 non supervised orthologous group
PAMMCEDC_04285 7.45e-167 - - - S ko:K06950 - ko00000 Psort location Cytoplasmic, score 8.96
PAMMCEDC_04286 1.22e-273 lipB 2.3.1.181 - H ko:K03801 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate
PAMMCEDC_04287 0.0 - 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 COG COG1022 Long-chain acyl-CoA synthetases (AMP-forming)
PAMMCEDC_04288 0.0 ndh 1.6.99.3 - C ko:K03885 ko00190,map00190 ko00000,ko00001,ko01000 NADH dehydrogenase, FAD-containing subunit
PAMMCEDC_04289 3.66e-113 - - - S - - - COG NOG29454 non supervised orthologous group
PAMMCEDC_04290 1.43e-63 - - - - - - - -
PAMMCEDC_04291 9.31e-44 - - - - - - - -
PAMMCEDC_04293 7.54e-285 - - - L - - - Belongs to the 'phage' integrase family
PAMMCEDC_04294 5.83e-36 - - - - - - - -
PAMMCEDC_04295 2.1e-182 - - - L - - - Restriction endonuclease
PAMMCEDC_04297 0.0 - - - - - - - -
PAMMCEDC_04300 6.25e-63 - - - - - - - -
PAMMCEDC_04301 1.11e-122 - - - S - - - Glycosyl hydrolase 108
PAMMCEDC_04302 9.71e-90 - - - - - - - -

eggNOG-mapper v2.1.12 (Database: eggNOG v5.0.2, Mar. 2021 release)