ORF_ID e_value Gene_name EC_number CAZy COGs KEGG_ko KEGG_Pathway BRITE Description
PBHJGNOG_00001 0.0 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_00002 9.01e-296 - - - S - - - Belongs to the peptidase M16 family
PBHJGNOG_00003 2.4e-186 mntH - - P ko:K03322 - ko00000,ko02000 Metal ion transporter, metal ion (Mn2 Fe2 ) transporter (Nramp) family
PBHJGNOG_00004 5.95e-192 xth 3.1.11.2 - L ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Psort location Cytoplasmic, score 9.97
PBHJGNOG_00005 1.11e-101 - - - S - - - COG NOG16874 non supervised orthologous group
PBHJGNOG_00007 4.95e-40 - - - S - - - COG NOG33517 non supervised orthologous group
PBHJGNOG_00008 0.0 lepA - - M ko:K03596 ko05134,map05134 ko00000,ko00001 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PBHJGNOG_00009 1.62e-270 - - - P - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_00010 2.24e-299 nhaA - - P ko:K03313 - ko00000,ko02000 ) H( ) antiporter that extrudes sodium in exchange for external protons
PBHJGNOG_00011 9.89e-83 - - - K - - - Transcriptional regulator, BlaI MecI CopY family
PBHJGNOG_00012 0.0 - - - KT - - - Peptidase, M56 family
PBHJGNOG_00013 3.34e-256 rmuC - - S ko:K09760 - ko00000 RmuC family
PBHJGNOG_00014 6.44e-208 map 3.4.11.18 - E ko:K01265 - ko00000,ko01000,ko01002 Psort location Cytoplasmic, score
PBHJGNOG_00015 1.85e-150 - - - S - - - Domain of unknown function (DUF4858)
PBHJGNOG_00016 0.0 - - - C - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_00017 2.1e-99 - - - - - - - -
PBHJGNOG_00018 5.82e-221 rluD 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
PBHJGNOG_00019 0.0 rumA 2.1.1.190 - H ko:K03215 - ko00000,ko01000,ko03009 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PBHJGNOG_00020 0.0 ltaS2 - - M - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_00021 3.56e-161 ybjG 3.6.1.27 - I ko:K19302 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00022 1.59e-156 - - - Q - - - ubiE/COQ5 methyltransferase family
PBHJGNOG_00023 0.0 - - - S - - - Domain of unknown function (DUF4784)
PBHJGNOG_00024 1.83e-259 leuB 1.1.1.85 - CE ko:K00052 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PBHJGNOG_00025 0.0 leuA_1 2.3.1.182 - E ko:K09011 ko00290,ko00660,ko01100,ko01210,ko01230,map00290,map00660,map01100,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Belongs to the alpha-IPM synthase homocitrate synthase family
PBHJGNOG_00026 4.22e-143 leuD 4.2.1.33, 4.2.1.35 - E ko:K01704 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PBHJGNOG_00027 0.0 leuC 4.2.1.33, 4.2.1.35 - H ko:K01703 ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PBHJGNOG_00028 0.0 leuA 2.3.3.13 - E ko:K01649 ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PBHJGNOG_00029 6e-27 - - - - - - - -
PBHJGNOG_00031 1.06e-156 - - - S - - - COG NOG29571 non supervised orthologous group
PBHJGNOG_00032 0.0 mutS_2 - - L - - - DNA mismatch repair protein MutS
PBHJGNOG_00033 3.52e-118 - - - S - - - COG NOG27987 non supervised orthologous group
PBHJGNOG_00034 3e-89 - - - S - - - COG NOG31702 non supervised orthologous group
PBHJGNOG_00035 8.85e-102 rplQ - - J ko:K02879 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L17
PBHJGNOG_00036 1.62e-83 rpoA 2.7.7.6 - K ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PBHJGNOG_00037 0.0 abf2 3.2.1.55 GH51 G ko:K01209 ko00520,map00520 ko00000,ko00001,ko01000 Alpha-L-arabinofuranosidase domain protein
PBHJGNOG_00038 0.0 - - - D ko:K09955 - ko00000 protein conserved in bacteria
PBHJGNOG_00039 2e-88 mepS 3.4.17.13 - M ko:K13694 - ko00000,ko01000,ko01002,ko01011 NlpC P60 family
PBHJGNOG_00040 8.47e-208 - - - S ko:K09973 - ko00000 GumN protein
PBHJGNOG_00041 9.47e-151 ppaX 3.1.3.18 - V ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 ko00000,ko00001,ko01000 HAD hydrolase, family IA, variant 1
PBHJGNOG_00042 2.35e-67 rplU - - J ko:K02888 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to 23S rRNA in the presence of protein L20
PBHJGNOG_00043 0.0 - - - M ko:K21572 - ko00000,ko02000 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
PBHJGNOG_00044 0.0 - - - P - - - TonB dependent receptor
PBHJGNOG_00045 0.0 - - - S - - - NHL repeat
PBHJGNOG_00046 6.72e-268 - 3.1.3.97 - S ko:K07053 - ko00000,ko01000 Domain of unknown function
PBHJGNOG_00047 0.0 - - - P ko:K03324 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00048 0.0 udk2 2.7.1.48 - FJ ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 Phosphoribulokinase Uridine kinase family
PBHJGNOG_00049 2.27e-98 - - - - - - - -
PBHJGNOG_00050 6.63e-71 - - - Q - - - COG3458 Acetyl esterase (deacetylase)
PBHJGNOG_00051 1.03e-224 - - - S - - - protein conserved in bacteria
PBHJGNOG_00052 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBHJGNOG_00053 8.91e-306 yihY - - S ko:K07058 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00054 8.62e-114 - - - C - - - Nitroreductase family
PBHJGNOG_00055 1.65e-140 ribE 2.5.1.9 - H ko:K00793 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 COG0307 Riboflavin synthase alpha chain
PBHJGNOG_00056 1.08e-195 - - - T - - - GHKL domain
PBHJGNOG_00057 3.25e-154 - - - K - - - Response regulator receiver domain protein
PBHJGNOG_00058 2.12e-155 phoU - - P ko:K02039 - ko00000 Plays a role in the regulation of phosphate uptake
PBHJGNOG_00059 5.87e-178 pstB 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PBHJGNOG_00060 2.31e-199 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00061 1.67e-271 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
PBHJGNOG_00062 9.72e-186 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 COG0226 ABC-type phosphate transport system, periplasmic component
PBHJGNOG_00063 0.0 glnS 6.1.1.18 - J ko:K01886 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Glutamine--tRNA ligase
PBHJGNOG_00064 5.29e-274 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_00065 1.84e-150 dedA - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_00066 2.46e-216 - - - M - - - COG NOG19097 non supervised orthologous group
PBHJGNOG_00067 1.08e-113 tpx 1.11.1.15 - O ko:K11065 - ko00000,ko01000 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PBHJGNOG_00068 1.54e-125 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00069 3.26e-111 - - - S - - - COG NOG14445 non supervised orthologous group
PBHJGNOG_00070 5.64e-157 yggS - - S ko:K06997 - ko00000 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PBHJGNOG_00071 1.31e-218 preA 1.3.98.1 - F ko:K00226 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of dihydroorotate to orotate
PBHJGNOG_00072 5.07e-12 ybeZ_1 - - T ko:K07175 - ko00000 ATPase related to phosphate starvation-inducible protein PhoH
PBHJGNOG_00075 6.4e-301 - - - E - - - FAD dependent oxidoreductase
PBHJGNOG_00076 9.13e-37 - - - - - - - -
PBHJGNOG_00077 2.84e-18 - - - - - - - -
PBHJGNOG_00079 4.22e-60 - - - - - - - -
PBHJGNOG_00081 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBHJGNOG_00082 0.0 - - - P ko:K14445 - ko00000,ko02000 Citrate transporter
PBHJGNOG_00083 0.0 - - - S - - - Fibrobacter succinogenes major domain (Fib_succ_major)
PBHJGNOG_00084 0.0 - - - S - - - amine dehydrogenase activity
PBHJGNOG_00086 1.29e-313 - - - S - - - Calycin-like beta-barrel domain
PBHJGNOG_00087 3.51e-180 - - - S - - - COG NOG26374 non supervised orthologous group
PBHJGNOG_00088 8.12e-194 - - - S - - - COG NOG19137 non supervised orthologous group
PBHJGNOG_00089 6.2e-264 - - - S - - - non supervised orthologous group
PBHJGNOG_00091 1.2e-91 - - - - - - - -
PBHJGNOG_00092 5.79e-39 - - - - - - - -
PBHJGNOG_00093 7.99e-120 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor, Bacteroides expansion family 1
PBHJGNOG_00094 6.57e-226 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PBHJGNOG_00095 8.89e-63 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_00096 6.53e-136 pnuC - - H ko:K03811 - ko00000,ko02000 nicotinamide mononucleotide transporter
PBHJGNOG_00097 1.58e-146 thiN 2.7.6.2 - H ko:K00949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 Thiamine diphosphokinase
PBHJGNOG_00098 6.3e-140 tag 3.2.2.20 - L ko:K01246 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 COG COG2818 3-methyladenine DNA glycosylase
PBHJGNOG_00099 3.27e-314 thrC 4.2.3.1 - E ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Threonine synthase
PBHJGNOG_00100 1.77e-301 - 5.4.2.12 - G ko:K15635 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 homoserine kinase
PBHJGNOG_00101 0.0 thrA 1.1.1.3, 2.7.2.4 - E ko:K12524 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 homoserine dehydrogenase
PBHJGNOG_00102 9.72e-313 - - - L - - - Belongs to the 'phage' integrase family
PBHJGNOG_00103 4.95e-146 - - - L - - - Belongs to the 'phage' integrase family
PBHJGNOG_00104 0.0 - - - N - - - bacterial-type flagellum assembly
PBHJGNOG_00106 1.5e-250 - - - M - - - COG2885 Outer membrane protein and related peptidoglycan-associated
PBHJGNOG_00107 9.65e-101 rng - - J ko:K08301 - ko00000,ko01000,ko03009,ko03019 S1 RNA binding domain
PBHJGNOG_00108 1.37e-99 purE 5.4.99.18 - F ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PBHJGNOG_00109 0.0 ispG 1.17.7.1, 1.17.7.3 - I ko:K03526 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
PBHJGNOG_00110 0.0 - - - S - - - Fic/DOC family
PBHJGNOG_00111 0.0 cadA 3.6.3.3, 3.6.3.5 - P ko:K01534 - ko00000,ko01000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00112 2.71e-98 - - - P ko:K03711 - ko00000,ko03000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_00113 7.56e-242 mdh 1.1.1.37 - C ko:K00024 ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the LDH MDH superfamily
PBHJGNOG_00114 0.0 - 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 glycosyl hydrolase, family 3
PBHJGNOG_00115 3.84e-140 - - - G - - - Psort location Extracellular, score
PBHJGNOG_00116 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
PBHJGNOG_00117 0.0 - 3.2.1.35 - G ko:K01197 ko00531,ko01100,map00531,map01100 ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042 beta-N-acetylglucosaminidase
PBHJGNOG_00118 0.0 - - - S ko:K21572 - ko00000,ko02000 COG NOG26302 non supervised orthologous group
PBHJGNOG_00119 0.0 - 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 glycosyl hydrolase, family 3
PBHJGNOG_00120 2.89e-220 - - - K - - - AraC-like ligand binding domain
PBHJGNOG_00121 0.0 ccp 1.11.1.5 - C ko:K00428 - ko00000,ko01000 Psort location Periplasmic, score
PBHJGNOG_00122 5.49e-192 ycf - - O - - - COG COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component
PBHJGNOG_00123 2.08e-207 - - - O - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00124 6.22e-302 ffh 3.6.5.4 - U ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko01000,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PBHJGNOG_00125 3.29e-297 - - - V - - - MATE efflux family protein
PBHJGNOG_00126 1.18e-281 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_00127 2.57e-288 - - - S ko:K07133 - ko00000 ATPase (AAA superfamily)
PBHJGNOG_00128 1.53e-288 - - - M - - - Glycosyl transferase 4-like domain
PBHJGNOG_00129 1.94e-249 - - - - - - - -
PBHJGNOG_00130 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00131 1.09e-90 - - - S - - - ORF6N domain
PBHJGNOG_00132 0.0 metG 6.1.1.10 - J ko:K01874 ko00450,ko00970,map00450,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PBHJGNOG_00133 1.07e-57 - - - K - - - Peptidase S24-like
PBHJGNOG_00134 0.0 - - - G - - - Alpha-L-rhamnosidase
PBHJGNOG_00135 0.0 - - - S - - - Parallel beta-helix repeats
PBHJGNOG_00136 0.0 - - - S ko:K09955 - ko00000 protein conserved in bacteria
PBHJGNOG_00137 5.75e-201 - - - S - - - COG4422 Bacteriophage protein gp37
PBHJGNOG_00138 2.3e-170 yfkO - - C - - - Nitroreductase family
PBHJGNOG_00139 1.69e-125 - - - S - - - Putative auto-transporter adhesin, head GIN domain
PBHJGNOG_00140 1.7e-191 - - - I - - - alpha/beta hydrolase fold
PBHJGNOG_00141 8.6e-229 - 1.3.5.2 - F ko:K00254 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
PBHJGNOG_00142 1.64e-239 pabB 2.6.1.85 - EH ko:K01665 ko00790,map00790 ko00000,ko00001,ko01000 COG COG0147 Anthranilate para-aminobenzoate synthases component I
PBHJGNOG_00143 1.46e-168 - - - S ko:K02651 ko04112,map04112 ko00000,ko00001,ko02035,ko02044 COG NOG28004 non supervised orthologous group
PBHJGNOG_00144 1.07e-266 - 3.4.21.107 - O ko:K04771 ko01503,ko02020,map01503,map02020 ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 Trypsin
PBHJGNOG_00145 2.09e-302 - - - - - - - -
PBHJGNOG_00146 0.0 - - - S - - - Tetratricopeptide repeat protein
PBHJGNOG_00147 6.83e-274 - - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_00148 4.24e-162 coaX 2.7.1.33 - F ko:K03525 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PBHJGNOG_00149 0.0 - - - I - - - Psort location OuterMembrane, score
PBHJGNOG_00150 2.51e-311 - - - S - - - Tetratricopeptide repeat protein
PBHJGNOG_00151 5.71e-128 - - - S - - - Lipopolysaccharide-assembly, LptC-related
PBHJGNOG_00152 2.88e-289 tlyC - - S ko:K03699 - ko00000,ko02042 Psort location CytoplasmicMembrane, score
PBHJGNOG_00153 0.0 ppiD 5.2.1.8 - O ko:K01802,ko:K03770 - ko00000,ko01000,ko03110 COG NOG26630 non supervised orthologous group
PBHJGNOG_00154 8.9e-247 rlmN 2.1.1.192 - J ko:K06941 - ko00000,ko01000,ko03009 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PBHJGNOG_00155 1.18e-251 - - - L - - - COG NOG11654 non supervised orthologous group
PBHJGNOG_00156 3.32e-263 pdxA 1.1.1.262 - C ko:K00097 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the PdxA family
PBHJGNOG_00157 3.37e-290 fhlA - - K - - - Sigma-54 interaction domain protein
PBHJGNOG_00158 1.57e-119 lptE - - S - - - COG NOG14471 non supervised orthologous group
PBHJGNOG_00159 5.92e-168 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_00160 3.04e-64 secG - - U ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase SecG subunit
PBHJGNOG_00161 0.0 - - - G - - - Transporter, major facilitator family protein
PBHJGNOG_00162 1.07e-79 pqqD - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_00163 2.48e-62 - - - - - - - -
PBHJGNOG_00164 2.66e-248 - - - S - - - COG NOG25792 non supervised orthologous group
PBHJGNOG_00165 1.94e-37 nnrD 4.2.1.136, 5.1.99.6 - H ko:K17758,ko:K17759 - ko00000,ko01000 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PBHJGNOG_00166 0.0 - - - S - - - Peptidase M16 inactive domain
PBHJGNOG_00167 0.0 fadD 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 AMP-binding enzyme
PBHJGNOG_00168 5.89e-257 argE 3.5.1.16 - E ko:K01438 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related
PBHJGNOG_00169 5.2e-294 - - - S ko:K07133 - ko00000 AAA domain
PBHJGNOG_00170 1.22e-83 - - - FG - - - Histidine triad domain protein
PBHJGNOG_00171 3.03e-91 hslR - - J ko:K04762 - ko00000,ko03110 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
PBHJGNOG_00172 6.55e-137 pth 3.1.1.29 - J ko:K01056 - ko00000,ko01000,ko03012 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PBHJGNOG_00173 3.45e-131 ctc - - J ko:K02897 ko03010,map03010 ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PBHJGNOG_00174 9.96e-85 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_00175 3.56e-207 nusB - - K ko:K03625 - ko00000,ko03009,ko03021 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PBHJGNOG_00177 1.2e-106 pgdA_1 - - G - - - Psort location Cytoplasmic, score
PBHJGNOG_00178 1.16e-241 queG 1.17.99.6 - C ko:K18979 - ko00000,ko01000,ko03016 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PBHJGNOG_00179 1.6e-249 - - - S - - - Putative binding domain, N-terminal
PBHJGNOG_00180 0.0 - - - S - - - Domain of unknown function (DUF4302)
PBHJGNOG_00181 2.49e-230 - - - S - - - Putative zinc-binding metallo-peptidase
PBHJGNOG_00182 0.0 - - - S ko:K21572 - ko00000,ko02000 COG NOG28139 non supervised orthologous group
PBHJGNOG_00183 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_00184 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_00185 0.0 - - - S ko:K21572 - ko00000,ko02000 COG NOG28139 non supervised orthologous group
PBHJGNOG_00186 7.89e-212 - - - S - - - Putative zinc-binding metallo-peptidase
PBHJGNOG_00187 5.97e-316 - - - S - - - Domain of unknown function (DUF4302)
PBHJGNOG_00188 5.56e-245 - - - S - - - Putative binding domain, N-terminal
PBHJGNOG_00189 1.1e-292 - - - - - - - -
PBHJGNOG_00190 2e-303 - 3.1.1.11 - G ko:K01051 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 COG NOG24911 non supervised orthologous group
PBHJGNOG_00191 1.06e-192 idnO 1.1.1.69 - IQ ko:K00046 - ko00000,ko01000 Oxidoreductase, short chain dehydrogenase reductase family protein
PBHJGNOG_00192 2.41e-164 kduI 5.3.1.17 - G ko:K01815 ko00040,map00040 ko00000,ko00001,ko01000 Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
PBHJGNOG_00193 2.75e-269 aspC 2.6.1.1, 2.6.1.2, 2.6.1.66 - E ko:K00812,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I II
PBHJGNOG_00194 3.2e-284 lolE_1 - - M ko:K09808 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 COG4591 ABC-type transport system, involved in lipoprotein release, permease component
PBHJGNOG_00195 0.0 - - - F - - - Belongs to the D-alanine--D-alanine ligase family
PBHJGNOG_00196 7.84e-106 - - - K - - - This enzyme acetylates the N-terminal alanine of ribosomal protein S18
PBHJGNOG_00197 3.52e-232 - - - M - - - Glycosyltransferase, group 2 family protein
PBHJGNOG_00198 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_00199 0.0 - - - S - - - non supervised orthologous group
PBHJGNOG_00200 3.48e-246 - - - S - - - Putative glycoside hydrolase Family 18, chitinase_18
PBHJGNOG_00201 7.22e-284 - - - S - - - Domain of unknown function (DUF1735)
PBHJGNOG_00202 0.0 - - - G - - - Psort location Extracellular, score 9.71
PBHJGNOG_00203 1.12e-315 - - - S - - - Domain of unknown function (DUF4989)
PBHJGNOG_00204 1.55e-104 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_00205 0.0 - - - G - - - Alpha-1,2-mannosidase
PBHJGNOG_00206 0.0 - - - G - - - Alpha-1,2-mannosidase
PBHJGNOG_00207 1.26e-220 - - - PT - - - COG3712 Fe2 -dicitrate sensor, membrane component
PBHJGNOG_00208 8.62e-126 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PBHJGNOG_00209 0.0 - - - G - - - Alpha-1,2-mannosidase
PBHJGNOG_00210 0.0 alaS 6.1.1.7 - J ko:K01872 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PBHJGNOG_00211 1.15e-235 - - - M - - - Peptidase, M23
PBHJGNOG_00212 8.21e-74 ycgE - - K - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_00213 0.0 relA 2.7.6.5 - KT ko:K00951 ko00230,map00230 ko00000,ko00001,ko01000 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PBHJGNOG_00214 0.0 mltD - - M ko:K08307 - ko00000,ko01000,ko01011 Transglycosylase SLT domain
PBHJGNOG_00215 2.16e-206 - - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_00216 5.04e-201 parB - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
PBHJGNOG_00217 9.59e-172 soj - - D ko:K03496 - ko00000,ko03036,ko04812 CobQ CobB MinD ParA nucleotide binding domain
PBHJGNOG_00218 2.95e-195 surE 3.1.3.5 - S ko:K03787 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
PBHJGNOG_00219 6.96e-263 lpxB 2.4.1.182 GT19 M ko:K00748 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PBHJGNOG_00220 6.97e-186 - - - S - - - COG NOG29298 non supervised orthologous group
PBHJGNOG_00221 1.57e-196 cdsA 2.7.7.41 - M ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 ko00000,ko00001,ko00002,ko01000 Belongs to the CDS family
PBHJGNOG_00222 0.0 ftsH - - O ko:K03798 - ko00000,ko00002,ko01000,ko01002,ko03110 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PBHJGNOG_00223 2.12e-81 rsfS - - J ko:K09710 - ko00000,ko03009 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PBHJGNOG_00224 2.14e-137 - 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 31 family
PBHJGNOG_00225 0.0 - 3.2.1.177 GH31 G ko:K01811 - ko00000,ko01000 Domain of unknown function (DUF5110)
PBHJGNOG_00226 1.68e-195 - - - I - - - COG0657 Esterase lipase
PBHJGNOG_00227 0.0 - - - S ko:K07133 - ko00000 ATPase (AAA superfamily)
PBHJGNOG_00228 0.0 - 3.2.1.80 - M ko:K03332 ko00051,map00051 ko00000,ko00001,ko01000 Glycosyl hydrolases family 32
PBHJGNOG_00229 2.26e-80 - - - S - - - Cupin domain protein
PBHJGNOG_00230 1.03e-214 cysK 2.5.1.47 - E ko:K01738,ko:K12339 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the cysteine synthase cystathionine beta- synthase family
PBHJGNOG_00231 0.0 - - - NU - - - CotH kinase protein
PBHJGNOG_00232 0.0 - - - M - - - Psort location OuterMembrane, score
PBHJGNOG_00233 2.21e-227 - 3.1.3.2 - S ko:K14379 ko00740,ko01100,ko04142,ko04380,ko05323,map00740,map01100,map04142,map04380,map05323 ko00000,ko00001,ko01000 Purple acid phosphatase
PBHJGNOG_00234 0.0 mscM - - M - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00235 0.0 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 COG3345 Alpha-galactosidase
PBHJGNOG_00236 1.55e-51 - - - M - - - Domain of unknown function (DUF1735)
PBHJGNOG_00237 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain protein
PBHJGNOG_00238 0.0 carB 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ)
PBHJGNOG_00239 8.72e-142 purN 2.1.2.2 - F ko:K11175 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PBHJGNOG_00240 3.66e-170 pdxB 1.1.1.290 - H ko:K03473 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate
PBHJGNOG_00241 3.22e-159 - - - S - - - Pfam:DUF5002
PBHJGNOG_00242 5.51e-142 - - - L - - - COG NOG29822 non supervised orthologous group
PBHJGNOG_00244 4.17e-83 - - - - - - - -
PBHJGNOG_00245 3.04e-09 - - - - - - - -
PBHJGNOG_00246 0.0 - - - M - - - COG3209 Rhs family protein
PBHJGNOG_00247 0.0 - - - M - - - COG COG3209 Rhs family protein
PBHJGNOG_00250 3.08e-79 - - - - - - - -
PBHJGNOG_00251 1.95e-231 - - - - - - - -
PBHJGNOG_00252 1.67e-87 - - - S - - - Phage minor structural protein
PBHJGNOG_00253 2.75e-249 - - - M - - - COG3209 Rhs family protein
PBHJGNOG_00254 4.37e-36 - - - - - - - -
PBHJGNOG_00256 9.41e-61 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_00257 6.36e-108 - - - V - - - N-acetylmuramoyl-L-alanine amidase
PBHJGNOG_00259 1.07e-82 - - - S - - - Putative phage abortive infection protein
PBHJGNOG_00260 8.35e-09 - - - S - - - Protein of unknown function (DUF2589)
PBHJGNOG_00261 2.62e-39 - - - - - - - -
PBHJGNOG_00262 0.0 proS 6.1.1.15 - J ko:K01881 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro)
PBHJGNOG_00263 3.28e-157 - - - K - - - COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PBHJGNOG_00264 3.88e-270 qseC - - T - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_00265 4.42e-217 - - - S ko:K01992 - ko00000,ko00002,ko02000 COG COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
PBHJGNOG_00266 1.28e-174 yxlF_1 - - V ko:K01990 - ko00000,ko00002,ko02000 Psort location Cytoplasmic, score 9.12
PBHJGNOG_00267 5.55e-267 - - - S - - - NPCBM-associated, NEW3 domain of alpha-galactosidase
PBHJGNOG_00269 7.07e-97 - - - S - - - COG NOG14442 non supervised orthologous group
PBHJGNOG_00270 1.93e-208 - - - S - - - COG NOG14441 non supervised orthologous group
PBHJGNOG_00271 0.0 - - - S - - - Psort location OuterMembrane, score 9.49
PBHJGNOG_00272 1.08e-244 tsaD 2.3.1.234 - O ko:K01409 - ko00000,ko01000,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PBHJGNOG_00273 1.14e-275 cinA 3.5.1.42 - S ko:K03742,ko:K03743 ko00760,map00760 ko00000,ko00001,ko01000 Belongs to the CinA family
PBHJGNOG_00274 2.83e-57 rpmB - - J ko:K02902 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL28 family
PBHJGNOG_00275 1e-35 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL33 family
PBHJGNOG_00276 1.54e-28 - - - S - - - Domain of unknown function (DUF4295)
PBHJGNOG_00277 5.58e-221 ftsY - - U ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PBHJGNOG_00278 1.91e-316 rimO 2.8.4.4 - J ko:K14441 - ko00000,ko01000,ko03009 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12
PBHJGNOG_00279 2.56e-55 himA - - L ko:K03530,ko:K04764 - ko00000,ko03032,ko03036,ko03400 COG0776 Bacterial nucleoid DNA-binding protein
PBHJGNOG_00280 1.5e-266 - - - L - - - Belongs to the bacterial histone-like protein family
PBHJGNOG_00281 4.94e-259 mnmA 2.8.1.13 - J ko:K00566 ko04122,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PBHJGNOG_00282 0.0 aprN - - M - - - Belongs to the peptidase S8 family
PBHJGNOG_00283 4.51e-281 xseA 3.1.11.6 - L ko:K03601 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PBHJGNOG_00284 7.52e-36 xseB 3.1.11.6 - L ko:K03602 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PBHJGNOG_00285 4.63e-255 ilvE 2.6.1.42 - EH ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 COG0115 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase
PBHJGNOG_00286 1.9e-138 - - - S - - - Protein of unknown function (DUF975)
PBHJGNOG_00287 2.44e-209 trmB 2.1.1.33 - J ko:K03439 - ko00000,ko01000,ko03016 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PBHJGNOG_00288 5.06e-259 mrp - - D ko:K03593 - ko00000,ko03029,ko03036 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
PBHJGNOG_00289 0.0 - - - CO - - - COG NOG24773 non supervised orthologous group
PBHJGNOG_00290 0.0 - - - U - - - Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PBHJGNOG_00291 1e-80 - - - K - - - Transcriptional regulator
PBHJGNOG_00293 2.09e-130 - - - M - - - COG NOG19089 non supervised orthologous group
PBHJGNOG_00294 2e-301 - - - V ko:K01992 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00295 4.89e-282 - - - CP ko:K01992 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00296 2.07e-217 - - - M ko:K01993 - ko00000 Auxiliary transport protein, membrane fusion protein (MFP) family protein
PBHJGNOG_00297 0.0 - - - MU - - - Psort location OuterMembrane, score
PBHJGNOG_00299 0.0 - - - S - - - SWIM zinc finger
PBHJGNOG_00300 0.0 - - - G - - - TRAP-type C4-dicarboxylate transport system periplasmic component
PBHJGNOG_00301 2.47e-251 - - - S - - - AAA domain (dynein-related subfamily)
PBHJGNOG_00302 0.0 - - - - - - - -
PBHJGNOG_00303 6.21e-265 - - - S - - - VWA domain containing CoxE-like protein
PBHJGNOG_00304 0.0 - - - T - - - COG0642 Signal transduction histidine kinase
PBHJGNOG_00305 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBHJGNOG_00306 3.86e-135 - 3.1.6.6 - P ko:K01133 - ko00000,ko01000 COG COG3119 Arylsulfatase A and related enzymes
PBHJGNOG_00307 1.45e-214 - - - M - - - COG2885 Outer membrane protein and related peptidoglycan-associated
PBHJGNOG_00308 3.6e-54 - - - - - - - -
PBHJGNOG_00309 0.0 - - - N - - - bacterial-type flagellum assembly
PBHJGNOG_00310 2.77e-198 - - - L - - - Belongs to the 'phage' integrase family
PBHJGNOG_00311 7.37e-37 - - - S - - - Domain of unknown function (DUF4248)
PBHJGNOG_00312 3.59e-115 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_00313 1.05e-310 nqrF 1.6.5.8 - C ko:K00351 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway
PBHJGNOG_00314 3.08e-124 nqrE 1.6.5.8 - C ko:K00350 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PBHJGNOG_00315 2.3e-142 nqrD 1.6.5.8 - C ko:K00349 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PBHJGNOG_00316 4.77e-43 nqrC 1.6.5.8 - C ko:K00348 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PBHJGNOG_00320 2.87e-47 - - - S - - - Winged helix-turn-helix domain (DUF2582)
PBHJGNOG_00321 3.47e-187 - - - M - - - O-antigen ligase like membrane protein
PBHJGNOG_00322 6.02e-138 - 1.11.1.15, 2.7.13.3 - O ko:K03564,ko:K07638 ko02020,ko02026,map02020,map02026 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 peroxiredoxin activity
PBHJGNOG_00325 0.0 - - - E - - - non supervised orthologous group
PBHJGNOG_00326 2.17e-151 - - - - - - - -
PBHJGNOG_00327 7.81e-47 - - - - - - - -
PBHJGNOG_00328 1.81e-165 - - - - - - - -
PBHJGNOG_00332 2.83e-34 - - - - - - - -
PBHJGNOG_00333 1.36e-224 - - - S ko:K09924 - ko00000 COG NOG19128 non supervised orthologous group
PBHJGNOG_00335 1.39e-167 - - - - - - - -
PBHJGNOG_00336 3.57e-166 - - - - - - - -
PBHJGNOG_00337 0.0 - - - M - - - O-antigen ligase like membrane protein
PBHJGNOG_00338 3.06e-286 mro_1 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Converts alpha-aldose to the beta-anomer
PBHJGNOG_00339 0.0 - - - S - - - protein conserved in bacteria
PBHJGNOG_00340 0.0 - - - G - - - Glycosyl hydrolase family 92
PBHJGNOG_00341 5.07e-285 mro_1 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Converts alpha-aldose to the beta-anomer
PBHJGNOG_00342 0.0 - - - S ko:K09704 - ko00000 Conserved protein
PBHJGNOG_00343 0.0 - - - G - - - Glycosyl hydrolase family 92
PBHJGNOG_00344 0.0 - - - G - - - COG NOG09951 non supervised orthologous group
PBHJGNOG_00345 0.0 - - - S - - - COG NOG26804 non supervised orthologous group
PBHJGNOG_00346 2.87e-315 - - - M - - - Glycosyl hydrolase family 76
PBHJGNOG_00347 0.0 - - - G - - - Belongs to the glycosyl hydrolase 43 family
PBHJGNOG_00348 1.32e-288 - - - G - - - Belongs to the glycosyl hydrolase 43 family
PBHJGNOG_00349 0.0 - - - S - - - COG NOG06097 non supervised orthologous group
PBHJGNOG_00350 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PBHJGNOG_00351 2.31e-82 - - - P - - - COG COG3119 Arylsulfatase A and related enzymes
PBHJGNOG_00353 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBHJGNOG_00354 1.71e-162 - - - T - - - Carbohydrate-binding family 9
PBHJGNOG_00355 9.03e-115 lpxA2 2.3.1.129 - M ko:K00677 ko00540,ko01100,ko01503,map00540,map01100,map01503 ko00000,ko00001,ko00002,ko01000,ko01005 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PBHJGNOG_00356 1.68e-296 - - - MU - - - Efflux transporter, outer membrane factor lipoprotein, NodT family
PBHJGNOG_00357 0.0 mexF - - V ko:K03296 - ko00000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PBHJGNOG_00358 4.69e-94 - - - S - - - Domain of unknown function (DUF4891)
PBHJGNOG_00359 4.03e-62 - - - - - - - -
PBHJGNOG_00360 5.54e-173 - - - S ko:K02069 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00361 1.91e-142 - 3.6.3.21 - V ko:K02028,ko:K02068 - ko00000,ko00002,ko01000,ko02000 ABC transporter
PBHJGNOG_00362 5.02e-123 - - - S - - - protein containing a ferredoxin domain
PBHJGNOG_00363 3.97e-279 aguA 3.5.3.12 - E ko:K10536 ko00330,ko01100,map00330,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_00364 9.31e-221 - 3.5.1.53 - S ko:K12251 ko00330,ko01100,map00330,map01100 ko00000,ko00001,ko01000 hydrolase, carbon-nitrogen family
PBHJGNOG_00365 1.44e-86 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PBHJGNOG_00366 0.0 - - - M - - - Sulfatase
PBHJGNOG_00367 0.0 aspS 6.1.1.12 - J ko:K01876 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PBHJGNOG_00368 2.89e-224 - - - I - - - lipid kinase, YegS Rv2252 BmrU family
PBHJGNOG_00369 4.41e-313 - - - G - - - Glycosyl hydrolase
PBHJGNOG_00370 1.44e-88 cspG - - K - - - Cold-shock DNA-binding domain protein
PBHJGNOG_00371 7.42e-256 rhlE 3.6.4.13 - JKL ko:K11927 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Belongs to the DEAD box helicase family
PBHJGNOG_00372 2.28e-257 - - - S - - - Nitronate monooxygenase
PBHJGNOG_00373 2.23e-65 - - - S - - - COG COG0724 RNA-binding proteins (RRM domain)
PBHJGNOG_00374 7.44e-184 - - - K - - - COG NOG38984 non supervised orthologous group
PBHJGNOG_00375 7.33e-141 - - - S - - - COG NOG23385 non supervised orthologous group
PBHJGNOG_00376 0.0 helD 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 COG COG3973 Superfamily I DNA and RNA helicases
PBHJGNOG_00378 2.17e-282 - - - P - - - COG COG3119 Arylsulfatase A and related enzymes
PBHJGNOG_00380 2.61e-76 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_00381 1.88e-140 - 3.5.1.28 - M ko:K01448 ko01503,map01503 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 COG NOG32858 non supervised orthologous group
PBHJGNOG_00382 7.92e-81 - - - - - - - -
PBHJGNOG_00383 1.59e-39 - - - S - - - Domain of unknown function (DUF4172)
PBHJGNOG_00386 1.64e-84 - - - S - - - Thiol-activated cytolysin
PBHJGNOG_00387 8.82e-214 - - - M - - - COG COG1082 Sugar phosphate isomerases epimerases
PBHJGNOG_00388 3.38e-29 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_00389 1.39e-141 - - - L - - - Belongs to the 'phage' integrase family
PBHJGNOG_00391 1.53e-251 - - - S - - - Clostripain family
PBHJGNOG_00392 2.63e-82 - - - S - - - COG NOG31446 non supervised orthologous group
PBHJGNOG_00393 2.82e-119 - - - S - - - L,D-transpeptidase catalytic domain
PBHJGNOG_00394 1.27e-189 rpoD - - K ko:K03086 - ko00000,ko03021 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PBHJGNOG_00395 1.61e-122 htrA - - O - - - Psort location Periplasmic, score
PBHJGNOG_00396 1.87e-181 dnaJ2 - - O ko:K03686,ko:K05516 - ko00000,ko03029,ko03036,ko03110 Psort location Cytoplasmic, score
PBHJGNOG_00397 0.0 eptA - - S - - - lipid A phosphoethanolamine transferase, associated with polymyxin resistance
PBHJGNOG_00398 1.68e-296 - - - M - - - COG NOG06295 non supervised orthologous group
PBHJGNOG_00399 3.66e-246 ltaE 4.1.2.48 - E ko:K01620 ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_00400 6.98e-78 - - - - - - - -
PBHJGNOG_00401 1.96e-121 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PBHJGNOG_00402 3.05e-90 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PBHJGNOG_00403 4.3e-48 - - - S - - - COG NOG33517 non supervised orthologous group
PBHJGNOG_00405 1.69e-164 - - - M - - - Glycosyl transferases group 1
PBHJGNOG_00406 1.13e-290 - - - M - - - Glycosyl transferases group 1
PBHJGNOG_00407 1.32e-220 - - - K - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_00408 2.28e-251 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PBHJGNOG_00409 3.96e-126 - - - K - - - -acetyltransferase
PBHJGNOG_00410 5.25e-15 - - - - - - - -
PBHJGNOG_00411 2.74e-315 - - - MU - - - Psort location OuterMembrane, score
PBHJGNOG_00412 0.0 - - - V - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PBHJGNOG_00413 1.18e-252 - - - M - - - Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PBHJGNOG_00414 1.19e-205 - - - K - - - transcriptional regulator (AraC family)
PBHJGNOG_00415 2.93e-276 - - - V - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00416 1.8e-289 - - - L - - - Belongs to the 'phage' integrase family
PBHJGNOG_00417 0.0 - - - - - - - -
PBHJGNOG_00418 3.86e-261 - - - - - - - -
PBHJGNOG_00419 1.38e-251 - - - S - - - COG NOG32009 non supervised orthologous group
PBHJGNOG_00420 0.0 - - - S - - - Major fimbrial subunit protein type IV, Fimbrillin, C-terminal
PBHJGNOG_00421 0.0 - - - U - - - COG0457 FOG TPR repeat
PBHJGNOG_00422 1.22e-149 - - - M - - - Protein of unknown function (DUF3575)
PBHJGNOG_00425 1.82e-29 - - - S - - - 6-bladed beta-propeller
PBHJGNOG_00426 1.66e-269 hemN - - H - - - Involved in the biosynthesis of porphyrin-containing compound
PBHJGNOG_00427 0.0 fusA2 - - J ko:K02355 - ko00000,ko03012,ko03029 Psort location Cytoplasmic, score 9.26
PBHJGNOG_00428 0.0 rprX 2.7.13.3 - T ko:K07636 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 two-component regulatory system, sensor kinase protein
PBHJGNOG_00429 2.14e-166 rprY - - K - - - COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PBHJGNOG_00430 3.98e-29 - - - - - - - -
PBHJGNOG_00431 3.91e-100 ohrR - - K - - - Transcriptional regulator, MarR family
PBHJGNOG_00432 2.54e-73 rpsF - - J ko:K02990 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Binds together with S18 to 16S ribosomal RNA
PBHJGNOG_00433 7.64e-57 rpsR - - J ko:K02963 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PBHJGNOG_00434 0.0 - - - S - - - hydrolase activity, acting on glycosyl bonds
PBHJGNOG_00435 0.0 - - - M - - - Alpha-galactosidase. Removes both branched alpha-1,3- linked galactose residues of blood group B antigens and linear alpha-1,3-linked galactose structures
PBHJGNOG_00436 1.49e-120 - - - K ko:K03088 - ko00000,ko03021 ECF sigma factor
PBHJGNOG_00437 0.0 rhgT_2 3.1.1.11 - EG ko:K01051 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 Psort location Extracellular, score
PBHJGNOG_00438 8.94e-224 - 3.1.1.11 - M ko:K01051 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 Pectinesterase
PBHJGNOG_00439 6.41e-306 - 3.2.1.172 GH105 G ko:K15532 - ko00000,ko01000 unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
PBHJGNOG_00440 1.21e-189 - - - S - - - VIT family
PBHJGNOG_00441 1.67e-99 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PBHJGNOG_00442 1.56e-277 ynfM - - EGP ko:K08224 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00443 1.52e-136 pbpC 2.4.1.129 GT51 M ko:K05367 ko00550,map00550 ko00000,ko00001,ko01000,ko01003,ko01011 COG4953 Membrane carboxypeptidase penicillin-binding protein PbpC
PBHJGNOG_00444 8.53e-38 rubR - - C - - - Psort location Cytoplasmic, score
PBHJGNOG_00445 3.57e-273 - - - T - - - His Kinase A (phosphoacceptor) domain
PBHJGNOG_00446 0.0 yoaB 3.6.3.8 - P ko:K01537 - ko00000,ko01000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00447 2.08e-151 yihX 3.1.3.10, 3.1.3.104 - S ko:K07025,ko:K20866,ko:K21063 ko00010,ko00740,ko01100,ko01110,ko01120,map00010,map00740,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_00448 4.56e-225 ribF 2.7.1.26, 2.7.7.2 - H ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 riboflavin biosynthesis protein
PBHJGNOG_00450 7.6e-177 - - - S ko:K07052 - ko00000 CAAX amino terminal protease family
PBHJGNOG_00451 7.4e-146 - - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_00452 2.67e-38 - - - K ko:K07727 - ko00000,ko03000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_00453 1.19e-93 sufE - - S ko:K02426 - ko00000 COG2166 SufE protein probably involved in Fe-S center assembly
PBHJGNOG_00454 3.78e-250 ywaD - - S - - - glutaminyl-peptide cyclotransferase (glutaminyl cyclase) K00683
PBHJGNOG_00455 1.22e-220 ykfA 3.4.17.13 - V ko:K01297 - ko00000,ko01000,ko01002,ko01011 proteins, homologs of microcin C7 resistance protein MccF
PBHJGNOG_00456 2.44e-203 bglA_1 - - G - - - Glycosyl hydrolase family 16
PBHJGNOG_00457 5.22e-228 - 2.3.1.19, 2.3.1.8 - C ko:K00625,ko:K00634 ko00430,ko00620,ko00640,ko00650,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00650,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PBHJGNOG_00458 0.0 - - - S ko:K21557 - ko00000,ko03000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_00459 0.0 - 3.2.1.135 GH13 G ko:K21575 - ko00000,ko01000 Belongs to the glycosyl hydrolase 13 family
PBHJGNOG_00460 0.0 susB 3.2.1.20, 3.2.1.3 GH31,GH97 G ko:K01187,ko:K21574 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 COG NOG06228 non supervised orthologous group
PBHJGNOG_00461 0.0 - - - HP ko:K21573 - ko00000,ko02000 TonB dependent receptor
PBHJGNOG_00462 0.0 susD - - M ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_00463 9.13e-284 - - - S ko:K21571 - ko00000 Outer membrane protein SusF_SusE
PBHJGNOG_00464 0.0 - - - S ko:K21571 - ko00000 Domain of unknown function (DUF5115)
PBHJGNOG_00465 0.0 - 3.2.1.1, 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 M ko:K01176,ko:K01208 ko00500,ko01100,ko04973,map00500,map01100,map04973 ko00000,ko00001,ko01000 Alpha-amylase domain
PBHJGNOG_00466 5.5e-193 lpxH 3.6.1.54 - S ko:K03269 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Psort location Cytoplasmic, score
PBHJGNOG_00467 4.8e-66 yitW - - S - - - FeS assembly SUF system protein
PBHJGNOG_00468 1.02e-163 radC - - E ko:K03630 - ko00000 Belongs to the UPF0758 family
PBHJGNOG_00469 1.09e-295 - - - M - - - Psort location CytoplasmicMembrane, score 9.46
PBHJGNOG_00470 1.04e-286 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PBHJGNOG_00471 1.66e-230 pta 2.3.1.8 - C ko:K00625,ko:K13788 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PBHJGNOG_00472 1.93e-70 lrgA - - S ko:K06518 - ko00000,ko02000 Psort location CytoplasmicMembrane, score
PBHJGNOG_00474 4.64e-35 - 6.4.1.1 - I ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Biotin carboxyl carrier protein
PBHJGNOG_00475 0.0 - - - T - - - Psort location CytoplasmicMembrane, score 7.88
PBHJGNOG_00476 6.93e-154 bioD 6.3.3.3 - H ko:K01935 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
PBHJGNOG_00477 3.71e-190 bioC 2.1.1.197, 3.1.1.85 - H ko:K02169,ko:K09789 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko00002,ko01000 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway
PBHJGNOG_00478 2.61e-160 - 3.1.1.85 - S ko:K09789 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko00002,ko01000 Protein of unknown function (DUF452)
PBHJGNOG_00479 0.0 bglB 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 3 family
PBHJGNOG_00480 6.43e-140 murA 2.5.1.7 - M ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PBHJGNOG_00481 3.41e-125 rimM - - J ko:K02860 - ko00000,ko03009 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PBHJGNOG_00482 1.02e-199 nlpD_1 - - M - - - Peptidase, M23 family
PBHJGNOG_00483 2.39e-276 dxr 1.1.1.267 - I ko:K00099 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
PBHJGNOG_00484 0.0 rseP - - M ko:K11749 ko02024,ko04112,map02024,map04112 ko00000,ko00001,ko01000,ko01002 zinc metalloprotease
PBHJGNOG_00485 3.28e-200 - - - - - - - -
PBHJGNOG_00486 3.07e-239 - 4.1.1.37 - H ko:K01599 ko00860,ko01100,ko01110,map00860,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Uroporphyrinogen decarboxylase (URO-D)
PBHJGNOG_00487 3.8e-105 rpiB 5.3.1.6 - G ko:K01808 ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Ribose 5-phosphate isomerase
PBHJGNOG_00488 0.0 tkt 2.2.1.1 - H ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the transketolase family
PBHJGNOG_00489 6.53e-35 - - - S - - - PFAM beta-lactamase domain protein
PBHJGNOG_00490 3.69e-209 - - - S ko:K08217 - br01600,ko00000,ko01504,ko02000 Transmembrane secretion effector
PBHJGNOG_00491 2.27e-241 - - - K ko:K13652 - ko00000,ko03000 Bacterial transcription activator, effector binding domain
PBHJGNOG_00492 2.7e-104 - - - KT - - - Bacterial transcription activator, effector binding domain
PBHJGNOG_00493 2.46e-249 - 3.1.3.100 - S ko:K06949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PBHJGNOG_00494 2.46e-172 - - - - - - - -
PBHJGNOG_00495 0.0 xynB - - I - - - pectin acetylesterase
PBHJGNOG_00496 0.0 - - - V - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00497 2.79e-112 pgpA 3.1.3.27 - I ko:K01095 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00498 1.7e-106 - - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_00499 1.19e-153 pgsA1 2.7.8.5 - I ko:K00995 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PBHJGNOG_00500 6.83e-224 - - - I - - - Inositolphosphotransferase 1, involved in synthesis of mannose-(inositol-P)2-ceramide (M(IP)2C), which is the most abundant sphingolipid in cells, mutation confers resistance to the antifungals syringomycin E and DmAMP1 in some growth media
PBHJGNOG_00501 1.69e-215 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00502 3.27e-67 - - - K - - - Fic/DOC family
PBHJGNOG_00503 2.09e-113 - 3.5.1.28 - V ko:K01447 - ko00000,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_00504 7.9e-55 - - - - - - - -
PBHJGNOG_00505 2.66e-165 kdsB 2.7.7.38 - H ko:K00979 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
PBHJGNOG_00506 1.13e-311 - - - S - - - Peptidase M16 inactive domain
PBHJGNOG_00507 4.21e-38 - 2.7.11.1 - S ko:K12132 - ko00000,ko01000,ko01001 phosphatidylinositol-4-phosphate 5-kinase family protein K00889
PBHJGNOG_00508 6.27e-219 prs 2.7.6.1 - EF ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 COG0462 Phosphoribosylpyrophosphate synthetase
PBHJGNOG_00509 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBHJGNOG_00510 5.42e-169 - - - T - - - Response regulator receiver domain
PBHJGNOG_00511 0.0 ydaH - - H ko:K12942 - ko00000 Psort location CytoplasmicMembrane, score
PBHJGNOG_00512 2.01e-134 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PBHJGNOG_00513 2.44e-242 - - - PT - - - Domain of unknown function (DUF4974)
PBHJGNOG_00514 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_00515 0.0 - - - E ko:K21572 - ko00000,ko02000 Pfam:SusD
PBHJGNOG_00516 0.0 - - - P - - - Protein of unknown function (DUF229)
PBHJGNOG_00517 4.91e-185 - - - G - - - COG NOG16664 non supervised orthologous group
PBHJGNOG_00518 2.73e-209 - - - M - - - COG COG1082 Sugar phosphate isomerases epimerases
PBHJGNOG_00519 3.99e-20 - - - S - - - COG NOG38865 non supervised orthologous group
PBHJGNOG_00520 0.0 - 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 Psort location CytoplasmicMembrane, score 9.82
PBHJGNOG_00521 0.0 yqeV 2.8.4.5 - J ko:K18707 - ko00000,ko01000,ko03016 Psort location Cytoplasmic, score 8.96
PBHJGNOG_00522 9.78e-210 waaM 2.3.1.241 - M ko:K02517 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase
PBHJGNOG_00523 1.18e-254 - - - S ko:K07011 - ko00000 Glycosyl transferase family group 2
PBHJGNOG_00524 6.68e-125 mgsA 4.2.3.3 - G ko:K01734 ko00640,ko01120,map00640,map01120 ko00000,ko00001,ko01000 methylglyoxal synthase
PBHJGNOG_00525 9.61e-84 folB 1.13.11.81, 4.1.2.25, 5.1.99.8 - H ko:K01633 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PBHJGNOG_00526 3.61e-244 - - - M - - - Glycosyl transferases group 1
PBHJGNOG_00527 6.77e-247 - - - G - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00528 0.0 malQ 2.4.1.25 GH77 G ko:K00705 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 9.26
PBHJGNOG_00529 0.0 nrd 1.17.4.1 - F ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen
PBHJGNOG_00530 5.67e-177 - 1.5.1.38, 1.5.1.39 - C ko:K19285,ko:K19286 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 Nitroreductase family
PBHJGNOG_00531 0.0 dnaA - - L ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PBHJGNOG_00532 1.18e-195 - - - Q ko:K02067 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component
PBHJGNOG_00533 1.39e-297 amiA 3.5.1.28 - M ko:K01448 ko01503,map01503 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 N-acetylmuramoyl-L-alanine amidase
PBHJGNOG_00534 1.65e-211 - - - S ko:K03453 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00535 2.92e-179 - - - S - - - Protein of unknown function (DUF1016)
PBHJGNOG_00536 7.13e-219 - - - E - - - GDSL-like Lipase/Acylhydrolase
PBHJGNOG_00537 0.0 cstA - - T ko:K06200 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00538 2.87e-30 - - - S - - - COG NOG34202 non supervised orthologous group
PBHJGNOG_00539 0.0 nifJ 1.2.7.1 - C ko:K03737 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
PBHJGNOG_00540 1e-35 - - - - - - - -
PBHJGNOG_00541 4.71e-201 opuAC - - E ko:K02002 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, substrate-binding protein, QAT family
PBHJGNOG_00542 7.14e-191 opuAB - - P ko:K02001 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 glycine betaine transport system, permease
PBHJGNOG_00543 5.27e-280 proV 3.6.3.32 - S ko:K02000 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 IMP dehydrogenase activity
PBHJGNOG_00544 4.75e-282 - - - S - - - Pfam:DUF2029
PBHJGNOG_00545 0.0 - - - S - - - Fibronectin type 3 domain
PBHJGNOG_00546 0.0 - - - G - - - pectinesterase activity
PBHJGNOG_00547 1.54e-182 - - - KT - - - COG COG3279 Response regulator of the LytR AlgR family
PBHJGNOG_00548 3.54e-185 - - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_00549 0.0 - - - G - - - pectate lyase K01728
PBHJGNOG_00550 0.0 - - - G - - - pectate lyase K01728
PBHJGNOG_00551 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_00552 0.0 - - - J - - - SusD family
PBHJGNOG_00553 0.0 - - - S - - - Domain of unknown function (DUF5123)
PBHJGNOG_00554 0.0 - - - T - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_00555 0.0 - 2.1.3.15, 6.4.1.3 - I ko:K01966 ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 COG COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
PBHJGNOG_00556 8.57e-145 - - - M - - - non supervised orthologous group
PBHJGNOG_00557 0.0 - - - M - - - COG NOG23378 non supervised orthologous group
PBHJGNOG_00558 0.0 lctP - - C ko:K03303 - ko00000,ko02000 L-lactate permease
PBHJGNOG_00559 2.08e-146 prfH - - J ko:K02839 - ko00000,ko03012 RF-1 domain
PBHJGNOG_00560 0.0 rtcB_2 6.5.1.3 - S ko:K14415 - ko00000,ko01000,ko03016 tRNA-splicing ligase RtcB
PBHJGNOG_00561 2.95e-108 trxA2 - - O - - - Psort location Cytoplasmic, score 9.26
PBHJGNOG_00562 1.31e-164 - - - K - - - COG3279 Response regulator of the LytR AlgR family
PBHJGNOG_00563 4.65e-256 ypdA_4 - - T - - - Histidine kinase
PBHJGNOG_00564 5.71e-219 - - - T - - - Histidine kinase
PBHJGNOG_00565 0.0 - - - P - - - Carboxypeptidase regulatory-like domain
PBHJGNOG_00566 2.2e-52 - - - L - - - plasmid recombination enzyme
PBHJGNOG_00567 3.1e-32 - - - L - - - plasmid recombination enzyme
PBHJGNOG_00568 5.2e-08 - - - P ko:K04758 - ko00000,ko02000 COGs COG1918 Fe2 transport system protein A
PBHJGNOG_00569 5.62e-78 - - - P - - - cation diffusion facilitator family transporter
PBHJGNOG_00570 1.28e-40 yijO - - K - - - transcriptional regulator, AraC
PBHJGNOG_00573 8.68e-200 - - - S - - - AAA domain, putative AbiEii toxin, Type IV TA system
PBHJGNOG_00574 0.0 - - - M - - - Glycosyl transferases group 1
PBHJGNOG_00575 1.65e-241 - 2.4.1.339, 2.4.1.340 GH130 G ko:K20885 - ko00000,ko01000 Pfam:DUF377
PBHJGNOG_00577 0.0 - 3.2.1.24 GH38 G ko:K01191 ko00511,map00511 ko00000,ko00001,ko01000,ko04131 Glycosyl hydrolase family 38 C-terminal domain protein
PBHJGNOG_00578 2.19e-298 - 3.2.1.197 - G ko:K21065 - ko00000,ko01000 beta-1,4-mannooligosaccharide phosphorylase
PBHJGNOG_00579 0.0 - - - S ko:K09704 - ko00000 Conserved protein
PBHJGNOG_00580 6.58e-302 - - - G - - - Glycosyl hydrolase family 76
PBHJGNOG_00581 1.03e-239 - - - S - - - Endonuclease Exonuclease phosphatase family
PBHJGNOG_00582 0.0 - - - G - - - Glycosyl hydrolase family 92
PBHJGNOG_00584 0.0 - - - G - - - Putative collagen-binding domain of a collagenase
PBHJGNOG_00585 7.73e-305 - 3.2.1.172 GH105 E ko:K15532 - ko00000,ko01000 unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
PBHJGNOG_00586 1.31e-79 - 3.2.1.51 GH95 G ko:K15923 ko00511,map00511 ko00000,ko00001,ko01000 COG NOG04001 non supervised orthologous group
PBHJGNOG_00587 4.57e-94 - - - - - - - -
PBHJGNOG_00588 5.35e-176 exbB - - U ko:K03561 - ko00000,ko02000 MotA TolQ ExbB proton channel family
PBHJGNOG_00589 1.17e-117 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PBHJGNOG_00590 7.6e-121 lemA - - S ko:K03744 - ko00000 LemA family
PBHJGNOG_00591 2.25e-216 htpX - - O ko:K03799 - ko00000,ko00002,ko01000,ko01002 Peptidase family M48
PBHJGNOG_00592 2.27e-109 - - - S - - - COG NOG30135 non supervised orthologous group
PBHJGNOG_00593 1.56e-98 yadS - - S - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00594 1.93e-85 tagO - - M - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00595 2.05e-132 rfbC 5.1.3.13 - G ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PBHJGNOG_00597 1.53e-74 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PBHJGNOG_00598 2.17e-81 ridA 3.5.99.10 - J ko:K09022 - ko00000,ko01000 endoribonuclease L-PSP
PBHJGNOG_00599 0.0 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Folylpolyglutamate synthase
PBHJGNOG_00603 4.83e-146 - - - - - - - -
PBHJGNOG_00604 0.0 - - - S - - - Domain of unknown function
PBHJGNOG_00605 0.0 - - - S ko:K21572 - ko00000,ko02000 PFAM SusD family
PBHJGNOG_00606 0.0 - - - P - - - TonB dependent receptor
PBHJGNOG_00607 0.0 - - - M - - - COG2335, Secreted and surface protein containing fasciclin-like repeats
PBHJGNOG_00608 0.0 - - - M ko:K19519 - ko00000,ko04516 Domain of unknown function (DUF5108)
PBHJGNOG_00609 0.0 - - - S ko:K21572 - ko00000,ko02000 Starch-binding associating with outer membrane
PBHJGNOG_00610 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_00611 0.0 - - - M - - - Domain of unknown function
PBHJGNOG_00612 0.0 - - - S - - - Domain of unknonw function from B. Theta Gene description (DUF3874)
PBHJGNOG_00613 1.93e-139 - - - L - - - DNA-binding protein
PBHJGNOG_00614 0.0 - - - G - - - Glycosyl hydrolases family 35
PBHJGNOG_00615 0.0 - - - G - - - beta-fructofuranosidase activity
PBHJGNOG_00616 1.76e-168 - - - E - - - GDSL-like Lipase/Acylhydrolase family
PBHJGNOG_00617 0.0 - - - G - - - alpha-galactosidase
PBHJGNOG_00618 2.72e-195 vicX - - S - - - Metallo-beta-lactamase domain protein
PBHJGNOG_00619 0.0 dtpD - - E - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00620 1.91e-98 - - - G - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_00621 1.19e-54 - - - - - - - -
PBHJGNOG_00622 0.0 - - - T - - - COG0642 Signal transduction histidine kinase
PBHJGNOG_00623 1.32e-96 nlpE - - MP - - - lipoprotein NlpE involved in copper resistance
PBHJGNOG_00624 4.97e-97 - - - S ko:K15977 - ko00000 Psort location CytoplasmicMembrane, score 9.46
PBHJGNOG_00625 1.61e-125 - - - S - - - COG NOG23374 non supervised orthologous group
PBHJGNOG_00626 0.0 - - - M - - - Outer membrane protein, OMP85 family
PBHJGNOG_00627 1.52e-301 - - - U - - - Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PBHJGNOG_00628 3.12e-79 - - - K - - - Penicillinase repressor
PBHJGNOG_00629 1.06e-180 aviRb - - J ko:K03437 - ko00000,ko03016 RNA methyltransferase, TrmH
PBHJGNOG_00630 5.29e-87 - - - - - - - -
PBHJGNOG_00631 1.13e-220 - - - S - - - COG NOG25370 non supervised orthologous group
PBHJGNOG_00632 1.06e-154 lspA 3.4.23.36 - MU ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PBHJGNOG_00633 2.94e-80 yocK - - T - - - RNA polymerase-binding protein DksA
PBHJGNOG_00634 0.0 ileS 6.1.1.5 - J ko:K01870 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PBHJGNOG_00635 6.4e-238 yhiM - - S - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00636 0.0 ramA_2 - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_00637 1.28e-135 - - - K - - - transcriptional regulator
PBHJGNOG_00638 4.07e-200 - - - L - - - Belongs to the 'phage' integrase family
PBHJGNOG_00639 1.75e-115 - - - - - - - -
PBHJGNOG_00640 7.25e-93 - - - - - - - -
PBHJGNOG_00641 3.26e-253 - - - G - - - SMP-30/Gluconolaconase/LRE-like region
PBHJGNOG_00643 3.55e-58 - - - S - - - COG NOG23407 non supervised orthologous group
PBHJGNOG_00644 2.47e-58 - - - D ko:K09888 - ko00000,ko03036 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PBHJGNOG_00645 0.0 rny - - S ko:K18682 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Endoribonuclease that initiates mRNA decay
PBHJGNOG_00646 2.38e-171 cutC - - P ko:K06201 - ko00000 Participates in the control of copper homeostasis
PBHJGNOG_00647 3.03e-277 madB 4.1.1.3 - C ko:K01572 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000,ko02000 COG COG1883 Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
PBHJGNOG_00648 4.46e-87 - - - S - - - COG NOG30410 non supervised orthologous group
PBHJGNOG_00649 1.61e-102 - - - - - - - -
PBHJGNOG_00650 0.0 - - - E - - - Transglutaminase-like protein
PBHJGNOG_00651 6.18e-23 - - - - - - - -
PBHJGNOG_00652 5.88e-164 - - - S - - - Domain of unknown function (DUF4627)
PBHJGNOG_00653 0.0 - - - S - - - COG NOG25375 non supervised orthologous group
PBHJGNOG_00654 2.29e-253 dinB 2.7.7.7 - L ko:K02346 - ko00000,ko01000,ko03400 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PBHJGNOG_00656 1.25e-294 - - - T - - - COG NOG26059 non supervised orthologous group
PBHJGNOG_00657 0.0 - - - H - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_00658 6.22e-199 - - - P ko:K21572 - ko00000,ko02000 non supervised orthologous group
PBHJGNOG_00659 1.57e-104 - - - S - - - Domain of unknown function (DUF5126)
PBHJGNOG_00660 1.92e-40 - - - S - - - Domain of unknown function
PBHJGNOG_00661 0.0 - 3.2.1.51 GH29 G ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 Alpha-L-fucosidase
PBHJGNOG_00662 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 beta-galactosidase
PBHJGNOG_00663 6.74e-288 - - - Q - - - Concanavalin A-like lectin/glucanases superfamily
PBHJGNOG_00664 7.82e-287 - - - G - - - Putative glycoside hydrolase Family 18, chitinase_18
PBHJGNOG_00665 0.0 - - - S - - - COG NOG26858 non supervised orthologous group
PBHJGNOG_00666 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_00668 5.23e-231 - - - PT - - - Domain of unknown function (DUF4974)
PBHJGNOG_00669 7.67e-124 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PBHJGNOG_00670 1.34e-123 - - GT4 M ko:K13004 - ko00000,ko01000,ko01003,ko01005 Glycosyltransferase, group 1 family protein
PBHJGNOG_00671 7.57e-26 - - - - - - - -
PBHJGNOG_00672 1.36e-67 - - - M - - - Glycosyl transferases group 1
PBHJGNOG_00673 5.16e-211 - 5.1.3.14 - G ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 ko00000,ko00001,ko00002,ko01000,ko01005 UDP-N-acetylglucosamine 2-epimerase
PBHJGNOG_00674 1.13e-184 - - - C - - - 4Fe-4S binding domain protein
PBHJGNOG_00675 7.53e-174 - - - C - - - Polysaccharide pyruvyl transferase
PBHJGNOG_00676 7.28e-11 - - - S ko:K07011 - ko00000 Glycosyl transferase family 2
PBHJGNOG_00677 5.13e-30 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00678 3.83e-117 - - - M - - - Glycosyl transferases group 1
PBHJGNOG_00679 9.2e-148 - - - M ko:K03980 - ko00000,ko01011,ko02000 peptidoglycan biosynthetic process
PBHJGNOG_00680 5.81e-141 - - - M - - - Chain length determinant protein
PBHJGNOG_00681 2.9e-248 kpsD - - M - - - COG1596 Periplasmic protein involved in polysaccharide export
PBHJGNOG_00682 0.0 - - - S ko:K21572 - ko00000,ko02000 COG NOG28394 non supervised orthologous group
PBHJGNOG_00683 0.0 - - - H - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_00685 1.35e-118 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PBHJGNOG_00686 0.0 - - - KT - - - Two component regulator propeller
PBHJGNOG_00687 0.0 - - - D ko:K09955 - ko00000 protein conserved in bacteria
PBHJGNOG_00688 0.0 - - - S - - - Serine hydrolase involved in the detoxification of formaldehyde
PBHJGNOG_00689 2.82e-189 - - - DT - - - aminotransferase class I and II
PBHJGNOG_00690 2.6e-88 - - - S - - - Protein of unknown function (DUF3037)
PBHJGNOG_00691 2.31e-192 murQ 4.2.1.126 - H ko:K07106 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PBHJGNOG_00692 0.0 - 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Glycosyl-hydrolase 97 C-terminal, oligomerisation
PBHJGNOG_00693 9.38e-189 uxuB_1 - - IQ - - - Oxidoreductase, short chain dehydrogenase reductase family protein
PBHJGNOG_00694 1.33e-296 uxuA 4.2.1.8 - H ko:K01686 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the dehydration of D-mannonate
PBHJGNOG_00695 6.4e-80 - - - - - - - -
PBHJGNOG_00696 0.0 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PBHJGNOG_00697 2.16e-176 - - - S - - - Heparinase II/III-like protein
PBHJGNOG_00698 4.65e-312 - - - G ko:K02429 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00699 0.0 - 3.2.1.50 - G ko:K01205 ko00531,ko01100,ko04142,map00531,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko04147 Alpha-N-acetylglucosaminidase
PBHJGNOG_00700 1.96e-297 - - - C - - - Domain of unknown function (DUF4855)
PBHJGNOG_00701 0.0 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 Alpha galactosidase A
PBHJGNOG_00702 5.24e-257 - - - E - - - COG NOG09493 non supervised orthologous group
PBHJGNOG_00703 0.0 - - - G - - - Phosphodiester glycosidase
PBHJGNOG_00704 0.0 - - - G - - - hydrolase activity, acting on glycosyl bonds
PBHJGNOG_00705 0.0 - - - - - - - -
PBHJGNOG_00706 0.0 - 3.1.1.53 - G ko:K05970 - ko00000,ko01000 COG NOG04984 non supervised orthologous group
PBHJGNOG_00707 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
PBHJGNOG_00708 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PBHJGNOG_00709 2.17e-212 - 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
PBHJGNOG_00710 2.56e-248 - 2.6.1.16 - M ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 ko00000,ko00001,ko01000,ko01002 SIS domain
PBHJGNOG_00711 0.0 - - - S - - - Domain of unknown function (DUF5018)
PBHJGNOG_00712 0.0 - - - F ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_00713 0.0 - - - H - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_00714 8.38e-310 ce 5.1.3.8 - G ko:K01787 ko00520,map00520 ko00000,ko00001,ko01000 COG COG2942 N-acyl-D-glucosamine 2-epimerase
PBHJGNOG_00715 0.0 araE - - P ko:K08138,ko:K08139 ko04113,map04113 ko00000,ko00001,ko02000 Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PBHJGNOG_00716 4.11e-278 - - - S - - - Domain of unknown function (DUF5109)
PBHJGNOG_00717 1.02e-303 - - - Q - - - Dienelactone hydrolase
PBHJGNOG_00718 2.42e-285 - - - K ko:K02529 - ko00000,ko03000 transcriptional regulator (AraC family)
PBHJGNOG_00719 4.55e-83 - - - L - - - COG NOG19098 non supervised orthologous group
PBHJGNOG_00720 9.85e-261 dnaN 2.7.7.7 - L ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PBHJGNOG_00721 3.42e-187 dnaQ 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 COG0847 DNA polymerase III epsilon subunit and related 3'-5'
PBHJGNOG_00722 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_00723 0.0 - - - P ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_00724 0.0 - - - G - - - Pectate lyase superfamily protein
PBHJGNOG_00725 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBHJGNOG_00726 4.2e-117 - 1.16.3.1 - S ko:K03594 ko00860,map00860 ko00000,ko00001,ko01000 Ferritin-like domain
PBHJGNOG_00727 4.29e-113 - - - - - - - -
PBHJGNOG_00728 1.02e-231 metF 1.5.1.20 - C ko:K00297 ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PBHJGNOG_00729 2.56e-272 holB 2.7.7.7 - L ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 COG2812 DNA polymerase III gamma tau subunits
PBHJGNOG_00730 6.1e-269 yaaT - - S - - - PSP1 C-terminal domain protein
PBHJGNOG_00731 2.3e-102 gldH - - S - - - Gliding motility-associated lipoprotein GldH
PBHJGNOG_00732 0.0 rodA - - D ko:K05837 - ko00000,ko03036 Belongs to the SEDS family
PBHJGNOG_00733 0.0 mrdA 3.4.16.4 - M ko:K05515 ko00550,ko01501,map00550,map01501 ko00000,ko00001,ko01000,ko01011 penicillin-binding protein 2
PBHJGNOG_00734 9.96e-109 mreD - - S - - - rod shape-determining protein MreD
PBHJGNOG_00735 2.13e-194 mreC - - M ko:K03570 - ko00000,ko03036 Involved in formation and maintenance of cell shape
PBHJGNOG_00736 5.31e-241 mreB - - D ko:K03569 - ko00000,ko02048,ko03036,ko04812 Cell shape determining protein, MreB Mrl family
PBHJGNOG_00737 0.0 purH 2.1.2.3, 3.5.4.10 - F ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 ko00000,ko00001,ko00002,ko01000,ko04147 bifunctional purine biosynthesis protein PurH
PBHJGNOG_00738 0.0 pepO - - O ko:K07386 - ko00000,ko01000,ko01002 Peptidase family M13
PBHJGNOG_00739 0.0 - - - S ko:K06158 - ko00000,ko03012 ABC transporter, ATP-binding protein
PBHJGNOG_00740 8.65e-226 - - - JM - - - COG NOG09722 non supervised orthologous group
PBHJGNOG_00741 0.0 - - - M - - - Outer membrane protein, OMP85 family
PBHJGNOG_00742 0.0 - - - S - - - Psort location OuterMembrane, score 9.49
PBHJGNOG_00743 5.69e-283 galM 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Converts alpha-aldose to the beta-anomer
PBHJGNOG_00744 0.0 - - - S ko:K03307 - ko00000 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PBHJGNOG_00745 3.04e-162 - - - F - - - Hydrolase, NUDIX family
PBHJGNOG_00746 0.0 - - - H - - - Outer membrane protein beta-barrel family
PBHJGNOG_00747 4.32e-83 ftsK - - D ko:K03466 - ko00000,ko03036 COG1674 DNA segregation ATPase FtsK SpoIIIE and related
PBHJGNOG_00748 2.5e-147 lolA - - M ko:K03634 - ko00000 COG NOG19151 non supervised orthologous group
PBHJGNOG_00749 3.68e-229 trxB 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PBHJGNOG_00750 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
PBHJGNOG_00751 3.9e-154 - - - K ko:K21556 - ko00000,ko03000 - catabolite gene activator and regulatory subunit of cAMP-dependent protein
PBHJGNOG_00752 0.0 glnA 6.3.1.2 - S ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 Glutamate--ammonia ligase, catalytic domain protein
PBHJGNOG_00753 5.19e-97 - - - - - - - -
PBHJGNOG_00754 2.01e-208 prmA - - J ko:K02687 - ko00000,ko01000,ko03009 Methylates ribosomal protein L11
PBHJGNOG_00755 1.46e-122 isiB - - C ko:K03839 - ko00000 Low-potential electron donor to a number of redox enzymes
PBHJGNOG_00756 0.0 bfmBAB 1.2.4.4 - C ko:K11381 ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130 br01601,ko00000,ko00001,ko00002,ko01000 dehydrogenase E1 component
PBHJGNOG_00757 2.28e-175 bfmBB 2.3.1.61 - C ko:K00658 ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 9.26
PBHJGNOG_00758 8.95e-91 - - - S - - - Protein of unknown function (DUF1573)
PBHJGNOG_00760 1.07e-131 - - - S - - - COG NOG28221 non supervised orthologous group
PBHJGNOG_00761 8.49e-144 engB - - D ko:K03978 - ko00000,ko03036 Necessary for normal cell division and for the maintenance of normal septation
PBHJGNOG_00762 0.0 - - - E - - - Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PBHJGNOG_00763 1.25e-142 recR - - L ko:K06187 ko03440,map03440 ko00000,ko00001,ko03400 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PBHJGNOG_00764 1.65e-97 - - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_00765 1.34e-131 speG 2.3.1.57 - J ko:K00657 ko00330,ko01100,ko04216,map00330,map01100,map04216 ko00000,ko00001,ko00002,ko01000 Acetyltransferase, gnat family
PBHJGNOG_00766 0.0 wbpM - - GM - - - Polysaccharide biosynthesis protein
PBHJGNOG_00767 1.66e-305 ugd 1.1.1.22 - C ko:K00012 ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PBHJGNOG_00768 1.45e-52 - 5.1.3.6 - M ko:K08679 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 NAD dependent epimerase dehydratase family
PBHJGNOG_00769 1.74e-57 - 5.1.3.6 - M ko:K08679 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 NAD dependent epimerase dehydratase family
PBHJGNOG_00771 0.0 - - - KT - - - COG NOG11230 non supervised orthologous group
PBHJGNOG_00772 5.8e-316 tyrS 6.1.1.1 - J ko:K01866 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PBHJGNOG_00773 3.14e-157 - - - L ko:K03424 - ko00000,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_00774 1.92e-64 yidD - - S ko:K08998 - ko00000 Could be involved in insertion of integral membrane proteins into the membrane
PBHJGNOG_00775 1.09e-72 rnpA 3.1.26.5 - J ko:K03536 - ko00000,ko01000,ko03016 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PBHJGNOG_00776 1.97e-174 hemD 4.2.1.75 - H ko:K01719 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000 Uroporphyrinogen-III synthase
PBHJGNOG_00777 3.51e-164 - - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_00778 2.97e-136 yvdD 3.2.2.10 - S ko:K06966 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the LOG family
PBHJGNOG_00779 0.0 - - - H - - - TonB-dependent Receptor Plug Domain
PBHJGNOG_00780 6.16e-137 - - - - - - - -
PBHJGNOG_00781 8.53e-123 - - - O - - - Thioredoxin
PBHJGNOG_00782 4.79e-107 - - - - - - - -
PBHJGNOG_00783 1.56e-38 - - - S - - - Domain of unknown function (DUF3244)
PBHJGNOG_00784 4.78e-247 - - - S - - - Tetratricopeptide repeats
PBHJGNOG_00785 2.28e-308 metK 2.5.1.6 - H ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PBHJGNOG_00787 3.09e-35 - - - - - - - -
PBHJGNOG_00788 6.3e-105 folK 2.7.6.3 - H ko:K00950 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase
PBHJGNOG_00789 3.49e-83 - - - - - - - -
PBHJGNOG_00790 2.31e-257 queA 2.4.99.17 - H ko:K07568 - ko00000,ko01000,ko03016 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PBHJGNOG_00791 1.76e-87 truB 5.4.99.25 - J ko:K03177 - ko00000,ko01000,ko03016 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PBHJGNOG_00792 4.29e-135 - - - I - - - Acyltransferase
PBHJGNOG_00793 2.48e-57 - - - S - - - COG NOG23371 non supervised orthologous group
PBHJGNOG_00794 0.0 - - - - - - - -
PBHJGNOG_00795 0.0 - - - M - - - Glycosyl hydrolases family 43
PBHJGNOG_00796 0.0 - - - G - - - Ricin-type beta-trefoil lectin domain-like
PBHJGNOG_00797 0.0 - - - - - - - -
PBHJGNOG_00798 0.0 - - - T - - - cheY-homologous receiver domain
PBHJGNOG_00799 0.0 - - - P - - - TonB-dependent Receptor Plug Domain
PBHJGNOG_00801 0.0 - - - S ko:K21572 - ko00000,ko02000 Pfam:SusD
PBHJGNOG_00802 5.93e-193 - - - M - - - COG2335, Secreted and surface protein containing fasciclin-like repeats
PBHJGNOG_00803 5.47e-243 - - - S - - - Domain of unknown function (DUF5007)
PBHJGNOG_00804 0.0 - - - P - - - Carboxypeptidase regulatory-like domain
PBHJGNOG_00805 0.0 - - - GM ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_00806 4.01e-179 - - - S - - - Fasciclin domain
PBHJGNOG_00807 0.0 - - - G - - - Domain of unknown function (DUF5124)
PBHJGNOG_00808 0.0 - - - S - - - Concanavalin A-like lectin/glucanases superfamily
PBHJGNOG_00809 0.0 - - - S - - - N-terminal domain of M60-like peptidases
PBHJGNOG_00810 0.0 - - - S - - - Type I phosphodiesterase / nucleotide pyrophosphatase
PBHJGNOG_00811 1.64e-151 - - - L - - - regulation of translation
PBHJGNOG_00812 5.76e-93 rluD 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
PBHJGNOG_00813 4.44e-225 ddl 6.3.2.4 - F ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Belongs to the D-alanine--D-alanine ligase family
PBHJGNOG_00814 2.48e-274 - - - I - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_00815 1.83e-169 - - - S - - - COG NOG31798 non supervised orthologous group
PBHJGNOG_00816 2.12e-84 glpE - - P - - - Rhodanese-like protein
PBHJGNOG_00817 1.4e-234 argF 2.1.3.11, 2.1.3.9 - E ko:K09065,ko:K13043 ko00220,ko01100,ko01230,map00220,map01100,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
PBHJGNOG_00818 7.76e-298 proA 1.2.1.41 - E ko:K00147 ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PBHJGNOG_00819 7.15e-256 proB 2.7.2.11 - E ko:K00931 ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PBHJGNOG_00820 1.14e-275 - - - E - - - DegT/DnrJ/EryC1/StrS aminotransferase family
PBHJGNOG_00821 2.5e-47 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_00822 3.74e-204 murI 5.1.1.3 - M ko:K01776 ko00471,ko01100,map00471,map01100 ko00000,ko00001,ko01000,ko01011 Provides the (R)-glutamate required for cell wall biosynthesis
PBHJGNOG_00823 4.45e-89 ompH - - M ko:K06142 - ko00000 membrane
PBHJGNOG_00824 8.69e-106 ompH - - M ko:K06142 - ko00000 membrane
PBHJGNOG_00825 0.0 yaeT - - M ko:K07277 - ko00000,ko02000,ko03029 Outer membrane protein assembly complex, YaeT protein
PBHJGNOG_00826 6.38e-178 uppS 2.5.1.31 - H ko:K00806 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PBHJGNOG_00827 5.43e-293 - - - G - - - COG NOG27066 non supervised orthologous group
PBHJGNOG_00828 1.34e-251 ribD 1.1.1.193, 3.5.4.26 - H ko:K11752 ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024 ko00000,ko00001,ko00002,ko01000 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PBHJGNOG_00829 3.44e-199 prmC 2.1.1.297 - J ko:K02493 - ko00000,ko01000,ko03012 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PBHJGNOG_00830 2.48e-111 recX - - S ko:K03565 - ko00000,ko03400 Modulates RecA activity
PBHJGNOG_00831 2.15e-151 pyrE 2.4.2.10, 4.1.1.23 - F ko:K00762,ko:K13421 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PBHJGNOG_00832 1.52e-89 - - - S - - - Polyketide cyclase / dehydrase and lipid transport
PBHJGNOG_00833 0.0 argH 4.3.2.1 - E ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Psort location Cytoplasmic, score
PBHJGNOG_00834 1.12e-31 - - - L - - - Belongs to the 'phage' integrase family
PBHJGNOG_00836 1.56e-127 - - - K - - - Transcription termination factor nusG
PBHJGNOG_00837 0.0 wbpM - - GM - - - Polysaccharide biosynthesis protein
PBHJGNOG_00838 4.42e-20 - - - - - - - -
PBHJGNOG_00839 9.57e-213 - - - L - - - Domain of unknown function (DUF4373)
PBHJGNOG_00840 6.4e-113 - - - L - - - COG NOG31286 non supervised orthologous group
PBHJGNOG_00841 7.45e-10 - - - - - - - -
PBHJGNOG_00842 0.0 - - - M - - - COG3209 Rhs family protein
PBHJGNOG_00843 0.0 - - - M - - - COG COG3209 Rhs family protein
PBHJGNOG_00845 0.0 - - - C ko:K09181 - ko00000 CoA binding domain protein
PBHJGNOG_00846 4.05e-231 - 3.2.1.40 - G ko:K05989 - ko00000,ko01000 Bacterial alpha-L-rhamnosidase C-terminal domain
PBHJGNOG_00847 1.66e-211 xynZ - - S - - - Esterase
PBHJGNOG_00848 2.61e-170 - - - E - - - GDSL-like Lipase/Acylhydrolase
PBHJGNOG_00849 0.0 - - - - - - - -
PBHJGNOG_00850 0.0 - - - S - - - NHL repeat
PBHJGNOG_00851 0.0 - - - P - - - TonB dependent receptor
PBHJGNOG_00852 0.0 - - - P - - - SusD family
PBHJGNOG_00853 3.8e-251 - - - S - - - Pfam:DUF5002
PBHJGNOG_00854 0.0 - - - S - - - Domain of unknown function (DUF5005)
PBHJGNOG_00855 0.0 - - - F ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_00856 3.6e-106 - - - S - - - Domain of unknown function (DUF5004)
PBHJGNOG_00857 2.62e-83 - - - S - - - Domain of unknown function (DUF4961)
PBHJGNOG_00858 4.79e-162 - - - S - - - Domain of unknown function (DUF4961)
PBHJGNOG_00859 0.0 - - - P - - - TonB-dependent Receptor Plug Domain
PBHJGNOG_00860 0.0 - - - F ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_00861 0.0 - - - H - - - CarboxypepD_reg-like domain
PBHJGNOG_00862 0.0 - 3.1.1.53 - G ko:K05970 - ko00000,ko01000 Glycosyl hydrolase family 2, sugar binding domain protein
PBHJGNOG_00863 1.3e-119 - - - G - - - Alpha-L-fucosidase
PBHJGNOG_00864 0.0 - - - G - - - Raffinose synthase or seed imbibition protein Sip1
PBHJGNOG_00865 0.0 - - - P - - - COG COG3119 Arylsulfatase A and related enzymes
PBHJGNOG_00867 4.42e-33 - - - - - - - -
PBHJGNOG_00868 0.0 - - - G - - - Glycosyl hydrolase family 76
PBHJGNOG_00869 0.0 - - - S - - - Concanavalin A-like lectin/glucanases superfamily
PBHJGNOG_00870 3.88e-227 - - - S - - - Domain of unknown function (DUF4361)
PBHJGNOG_00871 0.0 - - - P ko:K21572 - ko00000,ko02000 non supervised orthologous group
PBHJGNOG_00872 0.0 - - - P - - - TonB dependent receptor
PBHJGNOG_00873 1.19e-308 - - - S - - - IPT/TIG domain
PBHJGNOG_00874 0.0 - - - T - - - Response regulator receiver domain protein
PBHJGNOG_00875 2.58e-277 - - - K ko:K13652 - ko00000,ko03000 Bacterial transcription activator, effector binding domain
PBHJGNOG_00876 0.0 - - - G - - - Glycosyl hydrolase family 92
PBHJGNOG_00877 0.0 - - - G - - - Glycosyl hydrolase family 92
PBHJGNOG_00878 8.78e-195 - - - S - - - Peptidase of plants and bacteria
PBHJGNOG_00879 0.0 - - - G - - - Glycosyl hydrolase family 92
PBHJGNOG_00881 2.41e-182 - - - K ko:K02477 - ko00000,ko02022 LytTr DNA-binding domain protein
PBHJGNOG_00882 4.14e-235 - - - T - - - Histidine kinase
PBHJGNOG_00883 8.82e-213 - - - M ko:K15727 - ko00000,ko02000 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PBHJGNOG_00884 0.0 czcA - - P ko:K15726 - ko00000,ko02000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PBHJGNOG_00886 1.97e-129 bsaA 1.11.1.9 - O ko:K00432 ko00480,ko00590,ko04918,map00480,map00590,map04918 ko00000,ko00001,ko01000 Belongs to the glutathione peroxidase family
PBHJGNOG_00887 7.16e-132 idi - - I - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_00888 1.24e-302 queA 2.4.99.17 - H ko:K07568 - ko00000,ko01000,ko03016 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PBHJGNOG_00890 6.15e-168 - - - L - - - Arm DNA-binding domain
PBHJGNOG_00891 6.79e-78 - - - L - - - DNA binding domain, excisionase family
PBHJGNOG_00892 6.06e-07 - - - - - - - -
PBHJGNOG_00893 4.02e-237 - - - S - - - Primase C terminal 2 (PriCT-2)
PBHJGNOG_00895 1.71e-241 - - - - - - - -
PBHJGNOG_00901 8e-188 thiD 2.7.1.49, 2.7.4.7 - K ko:K00941 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 transcriptional regulator (AraC family)
PBHJGNOG_00903 3.04e-258 aroB 4.2.3.4 - E ko:K01735 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PBHJGNOG_00904 1.79e-87 - - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_00905 0.0 - - - H - - - Psort location OuterMembrane, score
PBHJGNOG_00906 0.0 cls - - I ko:K06131 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PBHJGNOG_00907 2.14e-127 rsmD 2.1.1.171 - L ko:K08316 - ko00000,ko01000,ko03009 RNA methyltransferase, RsmD family
PBHJGNOG_00908 1.01e-180 - - - S - - - Protein of unknown function (DUF3822)
PBHJGNOG_00909 3.84e-162 - - - S - - - COG NOG19144 non supervised orthologous group
PBHJGNOG_00910 1.29e-209 - - - - - - - -
PBHJGNOG_00911 4.51e-301 - - - S ko:K21572 - ko00000,ko02000 Pfam:SusD
PBHJGNOG_00912 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_00913 3.99e-182 - - - S - - - Beta-lactamase superfamily domain
PBHJGNOG_00914 2.21e-90 - - - S - - - Domain of unknown function (DUF4369)
PBHJGNOG_00915 2.26e-209 - - - M - - - Putative OmpA-OmpF-like porin family
PBHJGNOG_00916 0.0 - - - - - - - -
PBHJGNOG_00917 5.24e-208 - - - L - - - Belongs to the 'phage' integrase family
PBHJGNOG_00918 5.36e-249 - - - M - - - COG2885 Outer membrane protein and related peptidoglycan-associated
PBHJGNOG_00919 0.0 - - - D - - - domain, Protein
PBHJGNOG_00920 1.49e-223 - - - L - - - Belongs to the 'phage' integrase family
PBHJGNOG_00921 8.99e-168 - - - K - - - transcriptional regulator
PBHJGNOG_00922 9.14e-130 - - - K - - - Bacterial regulatory proteins, tetR family
PBHJGNOG_00923 7.42e-311 - - - MU - - - Efflux transporter, outer membrane factor lipoprotein, NodT family
PBHJGNOG_00924 8.33e-267 - - - V ko:K03296 - ko00000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PBHJGNOG_00925 1.16e-223 glsA 3.5.1.2 - E ko:K01425 ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230 ko00000,ko00001,ko01000 Belongs to the glutaminase family
PBHJGNOG_00926 4.21e-156 - - - P ko:K10716 - ko00000,ko02000 Ion channel
PBHJGNOG_00927 4.3e-169 lplA 6.3.1.20 - H ko:K03800 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Lipoate-protein ligase
PBHJGNOG_00928 0.0 lpdA 1.8.1.4 - C ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 Dihydrolipoyl dehydrogenase
PBHJGNOG_00929 7.53e-208 acm - - M ko:K07273 - ko00000 phage tail component domain protein
PBHJGNOG_00930 0.0 pfp 2.7.1.11, 2.7.1.90 - H ko:K00895,ko:K21071 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions
PBHJGNOG_00931 0.0 - - - M ko:K18139,ko:K18300 ko01501,ko02024,map01501,map02024 ko00000,ko00001,ko00002,ko01504,ko02000 Efflux transporter, outer membrane factor lipoprotein, NodT family
PBHJGNOG_00932 0.0 - - - V - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PBHJGNOG_00933 2.95e-283 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PBHJGNOG_00934 0.0 - - - M ko:K07001 - ko00000 Phospholipase, patatin family
PBHJGNOG_00935 1.27e-158 - - - - - - - -
PBHJGNOG_00936 0.0 - - - V - - - AcrB/AcrD/AcrF family
PBHJGNOG_00937 8.67e-21 - - - DM - - - Chain length determinant protein
PBHJGNOG_00939 2.06e-46 - - - S - - - Domain of unknown function (DUF4248)
PBHJGNOG_00940 1.48e-108 - 3.5.1.28 - V ko:K01447 - ko00000,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_00942 5.16e-110 - - - L - - - regulation of translation
PBHJGNOG_00943 0.0 - - - L - - - Protein of unknown function (DUF3987)
PBHJGNOG_00944 2.2e-83 - - - - - - - -
PBHJGNOG_00945 2.27e-49 - - - S - - - COG NOG35393 non supervised orthologous group
PBHJGNOG_00946 1.4e-52 - - - S - - - COG NOG30994 non supervised orthologous group
PBHJGNOG_00947 8.36e-38 - - - S - - - COG NOG35214 non supervised orthologous group
PBHJGNOG_00948 2.39e-179 ydfG - - S - - - Belongs to the short-chain dehydrogenases reductases (SDR) family
PBHJGNOG_00949 2.12e-89 - - - D - - - Sporulation and cell division repeat protein
PBHJGNOG_00950 1.71e-191 cysQ 3.1.3.7 - P ko:K01082 ko00920,ko01100,ko01120,ko01130,map00920,map01100,map01120,map01130 ko00000,ko00001,ko01000,ko03016 3'(2'),5'-bisphosphate nucleotidase
PBHJGNOG_00951 0.0 - - - P - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00952 1.71e-138 cysC 2.7.1.25 - F ko:K00860 ko00230,ko00920,ko01100,ko01120,map00230,map00920,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of activated sulfate
PBHJGNOG_00953 5.19e-222 cysD 2.7.7.4 - H ko:K00957 ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130 ko00000,ko00001,ko00002,ko01000 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase) FAD synthetase
PBHJGNOG_00954 0.0 cysN 2.7.1.25, 2.7.7.4 - H ko:K00955,ko:K00956 ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily
PBHJGNOG_00955 9e-279 - - - S - - - Sulfotransferase family
PBHJGNOG_00956 6.89e-236 - - - S - - - COG NOG26583 non supervised orthologous group
PBHJGNOG_00957 2.22e-272 - - - M - - - Psort location OuterMembrane, score
PBHJGNOG_00958 9.11e-92 ruvX - - L ko:K07447 - ko00000,ko01000 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PBHJGNOG_00959 3.26e-130 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PBHJGNOG_00960 1.17e-200 - - - S - - - COG COG0457 FOG TPR repeat
PBHJGNOG_00961 0.0 thrS 6.1.1.3 - J ko:K01868 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PBHJGNOG_00962 1.84e-133 infC - - J ko:K02520 - ko00000,ko03012,ko03029 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PBHJGNOG_00963 5.22e-37 rpmI - - J ko:K02916 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL35 family
PBHJGNOG_00964 6.17e-75 rplT - - J ko:K02887 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PBHJGNOG_00965 1.5e-310 tig - - O ko:K03545 - ko00000 peptidyl-prolyl cis-trans isomerase (trigger factor)
PBHJGNOG_00967 1.2e-49 - - - S - - - COG COG0724 RNA-binding proteins (RRM domain)
PBHJGNOG_00968 1.93e-123 metN - - Q ko:K02065 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, ATP-binding protein
PBHJGNOG_00969 2.58e-09 - - - S - - - Domain of unknown function (DUF4361)
PBHJGNOG_00970 4.06e-261 - - - - - - - -
PBHJGNOG_00972 0.0 - - - F ko:K21572 - ko00000,ko02000 Pfam:SusD
PBHJGNOG_00973 0.0 - - - H - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_00974 0.0 - - - - - - - -
PBHJGNOG_00975 0.0 - - - T - - - adenylate cyclase carring two-component hybrid sensor and regulator domains
PBHJGNOG_00976 5.76e-233 - 3.1.6.1 - P ko:K01130 ko00140,ko00600,map00140,map00600 ko00000,ko00001,ko01000 Arylsulfatase
PBHJGNOG_00977 2.82e-280 ybdG_1 - - M ko:K16053 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00978 1.53e-303 - - - P - - - COG COG3119 Arylsulfatase A and related enzymes
PBHJGNOG_00979 1e-216 - 5.1.3.14 - G ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 ko00000,ko00001,ko00002,ko01000,ko01005 UDP-N-acetylglucosamine 2-epimerase
PBHJGNOG_00980 3.96e-22 - - - M - - - Glycosyltransferase like family 2
PBHJGNOG_00981 4.31e-105 - - - S - - - Glycosyl transferase, family 2
PBHJGNOG_00982 1.68e-35 icaB - - G ko:K21478 - ko00000,ko01000 polysaccharide deacetylase
PBHJGNOG_00983 2.78e-50 - - - M ko:K06990,ko:K07282 - ko00000,ko04812 Bacterial capsule synthesis protein PGA_cap
PBHJGNOG_00984 9.97e-56 - - - M - - - TupA-like ATPgrasp
PBHJGNOG_00985 1.74e-153 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00987 9.07e-64 - - - M - - - Glycosyl transferases group 1
PBHJGNOG_00988 3.79e-59 - - - M - - - Glycosyltransferase like family 2
PBHJGNOG_00989 2.02e-109 - - - S - - - Polysaccharide pyruvyl transferase
PBHJGNOG_00990 3.31e-85 - - - C - - - Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term
PBHJGNOG_00991 3.29e-113 - - - M - - - Glycosyltransferase, group 2 family protein
PBHJGNOG_00992 1.53e-193 wcgX 2.7.8.33, 2.7.8.35 - M ko:K02851 - ko00000,ko01000,ko01003,ko01005 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_00993 2.62e-89 - - - G - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_00994 1.71e-173 - - - M ko:K01991 ko02026,map02026 ko00000,ko00001,ko02000 COG1596 Periplasmic protein involved in polysaccharide export
PBHJGNOG_00995 0.0 - - - DM - - - Chain length determinant protein
PBHJGNOG_00996 8.72e-109 - - - L - - - COG NOG29624 non supervised orthologous group
PBHJGNOG_00997 1.93e-09 - - - - - - - -
PBHJGNOG_00998 1.33e-90 - - - T ko:K03803 - ko00000,ko03021 Positive regulator of sigma(E), RseC MucC
PBHJGNOG_00999 0.0 pyrG 6.3.4.2 - F ko:K01937 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PBHJGNOG_01000 0.0 miaB 2.8.4.3 - J ko:K06168 - ko00000,ko01000,ko03016 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PBHJGNOG_01001 3.27e-167 - - - K - - - Bacteriophage CI repressor helix-turn-helix domain
PBHJGNOG_01002 3.32e-72 - - - - - - - -
PBHJGNOG_01003 4.04e-210 - - - L - - - Domain of unknown function (DUF4373)
PBHJGNOG_01004 2.21e-71 rnfB - - C ko:K03616 - ko00000 electron transport complex, RnfABCDGE type, B subunit
PBHJGNOG_01005 0.0 rnfC - - C ko:K03615 - ko00000 Part of a membrane complex involved in electron transport
PBHJGNOG_01006 4.15e-233 rnfD - - C ko:K03614 - ko00000 Part of a membrane complex involved in electron transport
PBHJGNOG_01007 4.28e-154 rnfG - - C ko:K03612 - ko00000 Part of a membrane complex involved in electron transport
PBHJGNOG_01008 1.92e-127 rnfE - - C ko:K03613 - ko00000 Part of a membrane complex involved in electron transport
PBHJGNOG_01009 1.99e-118 rnfA - - C ko:K03617 - ko00000 Part of a membrane complex involved in electron transport
PBHJGNOG_01010 6.04e-249 galE 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family
PBHJGNOG_01011 1.93e-203 ispE 2.7.1.148 - F ko:K00919 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PBHJGNOG_01012 0.0 dnaB 3.6.4.12 - L ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Participates in initiation and elongation during chromosome replication
PBHJGNOG_01013 0.0 pheT 6.1.1.20 - J ko:K01890 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Psort location Cytoplasmic, score
PBHJGNOG_01014 1.98e-178 yebC - - K - - - Transcriptional regulatory protein
PBHJGNOG_01015 1.63e-56 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01016 0.0 iorA 1.2.7.8 - C ko:K00179 - br01601,ko00000,ko01000 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates
PBHJGNOG_01017 8.86e-133 iorB 1.2.7.8 - C ko:K00180 - br01601,ko00000,ko01000 COG1014 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin
PBHJGNOG_01018 1.9e-314 paaK 6.2.1.30 - H ko:K01912 ko00360,ko01120,ko05111,map00360,map01120,map05111 ko00000,ko00001,ko01000 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
PBHJGNOG_01019 4.41e-131 xpt 2.4.2.22 - F ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000 Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PBHJGNOG_01020 4.03e-196 - - - C - - - 4Fe-4S binding domain protein
PBHJGNOG_01021 7.2e-241 yqfO - - C - - - Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PBHJGNOG_01022 2.27e-155 - - - S ko:K07164 - ko00000 Zinc ribbon domain protein
PBHJGNOG_01023 0.0 - - - M - - - Efflux transporter, outer membrane factor lipoprotein, NodT family
PBHJGNOG_01024 2.92e-254 - - - M - - - Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PBHJGNOG_01025 6.58e-159 - - - P - - - Psort location Cytoplasmic, score
PBHJGNOG_01026 1.4e-144 rsmG 2.1.1.170 - J ko:K03501 - ko00000,ko01000,ko03009,ko03036 Specifically methylates the N7 position of a guanine in 16S rRNA
PBHJGNOG_01027 1.47e-207 - - - S - - - Protein of unknown function (DUF3298)
PBHJGNOG_01028 8.72e-48 - - - S - - - COG NOG14112 non supervised orthologous group
PBHJGNOG_01029 4.42e-96 - - - J - - - Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
PBHJGNOG_01030 4.48e-205 - - - P - - - Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PBHJGNOG_01031 8.16e-36 - - - - - - - -
PBHJGNOG_01032 0.0 - - - P - - - COG COG4771 Outer membrane receptor for ferrienterochelin and colicins
PBHJGNOG_01033 1.42e-61 - - - P ko:K08364 - ko00000,ko02000 Heavy metal-associated domain protein
PBHJGNOG_01034 0.0 copA 3.6.3.4, 3.6.3.54 - P ko:K01533,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_01035 7.84e-91 mleN - - C ko:K03315 - ko00000,ko02000 Na H antiporter
PBHJGNOG_01037 4.44e-89 rpsP - - J ko:K02959 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bS16 family
PBHJGNOG_01038 8.45e-238 - - - K - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01039 0.0 fucI 5.3.1.25, 5.3.1.3 - G ko:K01818 ko00051,ko01120,map00051,map01120 ko00000,ko00001,ko01000 Converts the aldose L-fucose into the corresponding ketose L-fuculose
PBHJGNOG_01040 2.24e-153 fucA 4.1.1.104 - G ko:K22130 - ko00000,ko01000 L-fuculose-phosphate aldolase, aldolase class II family
PBHJGNOG_01041 0.0 fucK 2.7.1.5, 2.7.1.51 - G ko:K00848,ko:K00879 ko00040,ko00051,ko01120,map00040,map00051,map01120 ko00000,ko00001,ko01000 Involved in the catabolism of L-rhamnose (6-deoxy-L- mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate
PBHJGNOG_01042 1.68e-90 - 5.1.3.32 - G ko:K03534 - ko00000,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_01043 3.27e-312 fucP - - G ko:K02429 - ko00000,ko02000 L-fucose H symporter permease
PBHJGNOG_01044 1.88e-124 rpoE3 - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PBHJGNOG_01045 2.4e-231 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PBHJGNOG_01046 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_01047 0.0 - - - S - - - Susd and RagB outer membrane lipoprotein
PBHJGNOG_01048 3.15e-231 - - - G - - - Putative glycoside hydrolase Family 18, chitinase_18
PBHJGNOG_01049 0.0 - - - S - - - Domain of unknown function (DUF4973)
PBHJGNOG_01050 0.0 - - - G - - - Glycosyl hydrolases family 18
PBHJGNOG_01051 4.1e-221 - - - G - - - Glycosyl hydrolases family 18
PBHJGNOG_01052 0.0 - - - T - - - helix_turn_helix, arabinose operon control protein
PBHJGNOG_01053 4.7e-143 - - - S - - - Domain of unknown function (DUF4840)
PBHJGNOG_01054 0.0 potD - - P ko:K11069 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Psort location Periplasmic, score 9.44
PBHJGNOG_01055 7.28e-174 ydcV - - P ko:K11070 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, permease protein
PBHJGNOG_01056 2.14e-176 - - - P ko:K11071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_01057 0.0 potA 3.6.3.31 - P ko:K10112,ko:K11072,ko:K17324 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PBHJGNOG_01058 2.51e-259 - - - O - - - Antioxidant, AhpC TSA family
PBHJGNOG_01059 1.27e-149 glgP 2.4.1.1, 2.4.1.11, 2.4.1.8 GH65,GT3,GT35 G ko:K00688,ko:K00691,ko:K16153 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 ko00000,ko00001,ko01000,ko01003 COG0058 Glucan phosphorylase
PBHJGNOG_01060 3.96e-163 pssA 2.7.8.8 - I ko:K17103 ko00260,ko00564,ko01100,ko01110,map00260,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PBHJGNOG_01061 8.48e-56 - - - S - - - Domain of unknown function (DUF4834)
PBHJGNOG_01062 7.61e-102 tadA 3.5.4.33 - FJ ko:K11991 - ko00000,ko01000,ko03016 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PBHJGNOG_01063 6.13e-48 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01064 1.8e-83 - - - L ko:K07460 - ko00000 Belongs to the UPF0102 family
PBHJGNOG_01065 1.1e-78 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01066 2.3e-112 - - - M - - - Glycosyl transferases group 1
PBHJGNOG_01067 1.28e-280 - - - M - - - Glycosyl transferases group 1
PBHJGNOG_01068 2.5e-281 - - - M - - - Glycosyl transferases group 1
PBHJGNOG_01069 1.08e-247 - - - M - - - Glycosyltransferase like family 2
PBHJGNOG_01070 0.0 - - - M - - - Glycosyltransferase like family 2
PBHJGNOG_01071 1.63e-183 - - - T - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01072 4.25e-230 lpsA - - S - - - Glycosyl transferase family 90
PBHJGNOG_01073 2.37e-250 - - GT9 M ko:K02843 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 Glycosyltransferase family 9
PBHJGNOG_01074 1.07e-141 - - - M - - - Protein of unknown function (DUF4254)
PBHJGNOG_01075 2.56e-290 hydF - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01076 0.0 - - - EU - - - Peptidase, S9A B C family, catalytic domain protein
PBHJGNOG_01077 0.0 - - - S - - - phospholipase Carboxylesterase
PBHJGNOG_01078 0.0 hisS 6.1.1.21 - J ko:K01892 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Psort location Cytoplasmic, score
PBHJGNOG_01079 5.87e-156 - - - S ko:K06973 - ko00000 neutral zinc metallopeptidase
PBHJGNOG_01080 0.0 - 3.2.1.51 GH29 G ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 Alpha-L-fucosidase
PBHJGNOG_01081 5.9e-316 purA 6.3.4.4 - F ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PBHJGNOG_01082 7.33e-112 fur - - P ko:K03711 - ko00000,ko03000 Belongs to the Fur family
PBHJGNOG_01083 1.19e-157 - - - L - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01084 0.0 - 3.4.14.4 - S ko:K01277 - ko00000,ko01000,ko01002 Peptidase family M49
PBHJGNOG_01085 3.16e-102 - - - K - - - transcriptional regulator (AraC
PBHJGNOG_01086 0.0 recQ3 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase
PBHJGNOG_01087 1.83e-259 - - - M - - - Acyltransferase family
PBHJGNOG_01088 3.32e-60 - - - S - - - COG COG0457 FOG TPR repeat
PBHJGNOG_01089 8.74e-156 cysK 2.5.1.47 - E ko:K01738,ko:K12339 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the cysteine synthase cystathionine beta- synthase family
PBHJGNOG_01090 2.57e-250 thiL 2.7.4.16 - H ko:K00946 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
PBHJGNOG_01091 3.05e-193 deoD 2.4.2.1 - F ko:K03783 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
PBHJGNOG_01092 4.16e-281 lpxK 2.7.1.130 - F ko:K00912 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA)
PBHJGNOG_01093 0.0 sppA - - OU ko:K04773 - ko00000,ko01000,ko01002 signal peptide peptidase SppA, 67K type
PBHJGNOG_01094 2.98e-166 - - - V - - - HlyD family secretion protein
PBHJGNOG_01095 3.76e-102 - - - - - - - -
PBHJGNOG_01096 2.21e-17 - - - S - - - Domain of unknown function (DUF5030)
PBHJGNOG_01097 0.0 - - - S - - - Erythromycin esterase
PBHJGNOG_01098 3.95e-193 - - - S - - - Domain of unknown function (DUF5030)
PBHJGNOG_01099 0.0 - - - E - - - Peptidase M60-like family
PBHJGNOG_01100 1.67e-159 - - - - - - - -
PBHJGNOG_01101 0.0 - - - S - - - Putative binding domain, N-terminal
PBHJGNOG_01102 1.7e-237 - - - S - - - Domain of unknown function (DUF4361)
PBHJGNOG_01103 0.0 - - - P - - - SusD family
PBHJGNOG_01104 0.0 - - - P - - - TonB dependent receptor
PBHJGNOG_01105 0.0 - - - S - - - NHL repeat
PBHJGNOG_01107 0.0 guaA 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the synthesis of GMP from XMP
PBHJGNOG_01108 3.29e-83 mscL - - M ko:K03282 - ko00000,ko02000 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PBHJGNOG_01109 1.5e-219 gap 1.2.1.12 - C ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PBHJGNOG_01110 0.0 dcp 3.4.15.5, 3.4.24.70 - E ko:K01284,ko:K01414 - ko00000,ko01000,ko01002 Psort location Cytoplasmic, score
PBHJGNOG_01111 1.03e-108 - - - S - - - COG NOG30732 non supervised orthologous group
PBHJGNOG_01112 1.31e-103 comEB 3.5.4.12 - F ko:K01493 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko02044 Cytidine and deoxycytidylate deaminase zinc-binding region
PBHJGNOG_01113 0.0 ctp 3.4.21.102 - M ko:K03797 - ko00000,ko01000,ko01002 Belongs to the peptidase S41A family
PBHJGNOG_01114 1.97e-132 fthC 6.3.3.2 - H ko:K01934 ko00670,ko01100,map00670,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_01115 1.3e-200 - 3.1.3.15 - E ko:K04486 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 COG COG1387 Histidinol phosphatase and related hydrolases of the PHP family
PBHJGNOG_01116 8.02e-59 - - - S - - - COG NOG38282 non supervised orthologous group
PBHJGNOG_01117 4.2e-264 recF - - L ko:K03629 ko03440,map03440 ko00000,ko00001,ko03400 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PBHJGNOG_01118 3.46e-144 - - - S - - - Tetratricopeptide repeat protein
PBHJGNOG_01119 8.15e-267 - - - S - - - Beta-lactamase superfamily domain
PBHJGNOG_01120 2.66e-218 glpQ1_1 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_01121 0.0 - - - G ko:K07783 ko02020,map02020 ko00000,ko00001,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_01122 2.08e-145 - - - S - - - Protein of unknown function (DUF2490)
PBHJGNOG_01123 0.0 - - - S - - - Fibrobacter succinogenes major domain (Fib_succ_major)
PBHJGNOG_01124 5.38e-121 - - - Q - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01125 1.62e-195 hisG 2.4.2.17 - F ko:K00765 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 ATP phosphoribosyltransferase
PBHJGNOG_01126 2.92e-296 hisD 1.1.1.23 - E ko:K00013 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PBHJGNOG_01127 2.3e-254 hisC 2.6.1.9 - E ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PBHJGNOG_01128 5.87e-278 hisB 3.1.3.15, 4.2.1.19 - E ko:K01089,ko:K01693 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Histidine biosynthesis bifunctional protein HisB
PBHJGNOG_01129 3.85e-117 - - - T - - - Tyrosine phosphatase family
PBHJGNOG_01130 0.0 nadE 6.3.5.1 - H ko:K01950 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PBHJGNOG_01131 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_01132 0.0 - - - K - - - Pfam:SusD
PBHJGNOG_01133 4.82e-193 - - - S - - - Domain of unknown function (DUF4984)
PBHJGNOG_01134 4.86e-286 - - - S - - - Domain of unknown function (DUF5003)
PBHJGNOG_01135 0.0 - - - S - - - leucine rich repeat protein
PBHJGNOG_01136 0.0 - - - S - - - Putative binding domain, N-terminal
PBHJGNOG_01137 0.0 - - - G - - - Glycosyl hydrolase family 92
PBHJGNOG_01138 1.31e-135 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PBHJGNOG_01139 2.84e-239 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PBHJGNOG_01140 0.0 - 3.2.1.99 GH43 G ko:K06113 - ko00000,ko01000 Glycosyl hydrolases family 43
PBHJGNOG_01141 0.0 - - - F ko:K21572 - ko00000,ko02000 Pfam:SusD
PBHJGNOG_01142 5.12e-93 - - - P - - - TonB-dependent Receptor Plug Domain
PBHJGNOG_01143 2.11e-183 - - - GM ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_01144 4.7e-108 rplM - - J ko:K02871 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PBHJGNOG_01145 1.02e-81 rpsI - - J ko:K02996 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS9 family
PBHJGNOG_01146 6.56e-188 rpsB - - J ko:K02967 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS2 family
PBHJGNOG_01147 1.54e-74 - - - K - - - Helix-turn-helix XRE-family like proteins
PBHJGNOG_01148 3.21e-148 buk 2.7.2.7 - H ko:K00929 ko00650,ko01100,map00650,map01100 ko00000,ko00001,ko01000 Belongs to the acetokinase family
PBHJGNOG_01149 0.0 - - - M - - - Dipeptidase
PBHJGNOG_01150 0.0 - - - M - - - Peptidase, M23 family
PBHJGNOG_01151 0.0 - - - O - - - non supervised orthologous group
PBHJGNOG_01152 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_01153 4.6e-312 - - - S ko:K21572 - ko00000,ko02000 COG NOG26865 non supervised orthologous group
PBHJGNOG_01154 9.14e-263 ald 1.4.1.1 - C ko:K00259 ko00250,ko00430,ko01100,map00250,map00430,map01100 ko00000,ko00001,ko01000 Belongs to the AlaDH PNT family
PBHJGNOG_01155 4.97e-220 fabK 1.3.1.9 - C ko:K02371 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 related to 2-nitropropane dioxygenase
PBHJGNOG_01156 3.27e-170 - - - S - - - COG NOG28261 non supervised orthologous group
PBHJGNOG_01158 1.18e-126 - - - S - - - COG NOG28799 non supervised orthologous group
PBHJGNOG_01159 1.5e-220 - - - K - - - COG NOG25837 non supervised orthologous group
PBHJGNOG_01160 2.2e-123 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PBHJGNOG_01161 3.41e-105 nadC 2.4.2.19 - H ko:K00767 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NadC ModD family
PBHJGNOG_01162 1.28e-127 - - - K - - - Cupin domain protein
PBHJGNOG_01163 0.0 acsA 6.2.1.1, 6.2.1.32 - I ko:K01895,ko:K08295 ko00010,ko00620,ko00627,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00627,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko01004 Psort location Cytoplasmic, score
PBHJGNOG_01164 6.54e-293 - - - NU - - - bacterial-type flagellum-dependent cell motility
PBHJGNOG_01165 1.39e-286 - - - G - - - Putative glycoside hydrolase Family 18, chitinase_18
PBHJGNOG_01166 0.0 - - - S - - - non supervised orthologous group
PBHJGNOG_01167 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_01168 4.42e-170 - - - K - - - Helix-turn-helix domain
PBHJGNOG_01169 1.2e-173 pgcA 5.4.2.2 - G ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain II
PBHJGNOG_01170 4.18e-307 - - - O - - - Glycosyl Hydrolase Family 88
PBHJGNOG_01171 1.07e-204 pheA 4.2.1.51 - E ko:K04518 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PBHJGNOG_01172 2.26e-170 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01173 0.0 recQ2 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
PBHJGNOG_01174 0.0 recJ - - L ko:K07462 ko03410,ko03430,ko03440,map03410,map03430,map03440 ko00000,ko00001,ko01000,ko03400 single-stranded-DNA-specific exonuclease recJ
PBHJGNOG_01175 6.8e-221 - - - G - - - COG COG4632 Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase
PBHJGNOG_01176 3.24e-102 - - - S ko:K07107 - ko00000,ko01000 acyl-CoA thioester hydrolase, YbgC YbaW family
PBHJGNOG_01177 4.31e-156 - - - S - - - Domain of unknown function (DUF4919)
PBHJGNOG_01178 9.81e-149 sanA - - S ko:K03748 - ko00000 Psort location CytoplasmicMembrane, score 9.82
PBHJGNOG_01179 6.32e-05 - - - J - - - Threonine alanine tRNA ligase second additional domain protein
PBHJGNOG_01185 2.11e-12 - - - C ko:K22226 - ko00000 SMART Elongator protein 3 MiaB NifB
PBHJGNOG_01186 5.65e-98 - - - L - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01187 0.000298 - - - - - - - -
PBHJGNOG_01188 2.58e-99 - - - - - - - -
PBHJGNOG_01190 0.0 - - - O - - - COG NOG06109 non supervised orthologous group
PBHJGNOG_01191 0.0 - - - S - - - PKD-like family
PBHJGNOG_01192 1.25e-146 - - - S - - - Domain of unknown function (DUF4843)
PBHJGNOG_01193 0.0 - - - J ko:K21572 - ko00000,ko02000 Pfam:SusD
PBHJGNOG_01194 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_01195 4.83e-283 - - - PT - - - Domain of unknown function (DUF4974)
PBHJGNOG_01197 6.27e-131 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor, ECF subfamily
PBHJGNOG_01198 0.0 gidA - - D ko:K03495 - ko00000,ko03016,ko03036 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PBHJGNOG_01199 1.14e-121 apt 2.4.2.7 - F ko:K00759 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000,ko04147 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PBHJGNOG_01200 0.0 uvrC - - L ko:K03703 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PBHJGNOG_01201 0.0 - 3.2.1.177 GH31 G ko:K01811 - ko00000,ko01000 Belongs to the glycosyl hydrolase 31 family
PBHJGNOG_01202 0.0 - - - KT - - - Y_Y_Y domain
PBHJGNOG_01203 0.0 - - - G - - - COG NOG26813 non supervised orthologous group
PBHJGNOG_01204 0.0 - - - G - - - F5/8 type C domain
PBHJGNOG_01205 0.0 - 3.2.1.51 GH29 G ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 Alpha-L-fucosidase
PBHJGNOG_01206 2.69e-82 - 5.1.3.32 - G ko:K03534 - ko00000,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_01207 1.36e-184 - - - K - - - helix_turn_helix, arabinose operon control protein
PBHJGNOG_01208 0.0 - - - G - - - Glycosyl hydrolases family 43
PBHJGNOG_01209 0.0 - - - G - - - Glycosyl-hydrolase 97 C-terminal, oligomerisation
PBHJGNOG_01210 2.73e-203 - - - M - - - Domain of unknown function (DUF4488)
PBHJGNOG_01211 0.0 - - - S ko:K09955 - ko00000 protein conserved in bacteria
PBHJGNOG_01212 4.11e-255 - - - G - - - hydrolase, family 43
PBHJGNOG_01213 0.0 - - - N - - - BNR repeat-containing family member
PBHJGNOG_01214 0.0 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2264)
PBHJGNOG_01215 0.0 - - - T - - - adenylate cyclase carring two-component hybrid sensor and regulator domains
PBHJGNOG_01217 1.82e-238 - - - S - - - amine dehydrogenase activity
PBHJGNOG_01218 0.0 - - - H - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_01219 0.0 - - - P ko:K21572 - ko00000,ko02000 Psort location OuterMembrane, score
PBHJGNOG_01220 2.95e-141 - - - S - - - Domain of unknown function (DUF4361)
PBHJGNOG_01221 0.0 - - - G - - - Glycosyl hydrolases family 43
PBHJGNOG_01222 2.17e-268 - - - G - - - Glycosyl hydrolases family 43
PBHJGNOG_01223 0.0 - - - S - - - COG NOG19133 non supervised orthologous group
PBHJGNOG_01224 1.72e-294 - - - E - - - Glycosyl Hydrolase Family 88
PBHJGNOG_01225 1e-249 - - - S - - - acetyltransferase involved in intracellular survival and related
PBHJGNOG_01226 5.44e-230 - - - S ko:K01163 - ko00000 Conserved protein
PBHJGNOG_01227 0.0 atpA 3.6.3.14, 3.6.3.15 - C ko:K02117 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit
PBHJGNOG_01228 1.5e-194 - - - C - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01229 1.97e-105 - - - C ko:K02121 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002 COG NOG11642 non supervised orthologous group
PBHJGNOG_01230 4.87e-85 - - - - - - - -
PBHJGNOG_01231 5.44e-23 - - - - - - - -
PBHJGNOG_01232 1.79e-75 - - - K - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01233 5.82e-123 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_01234 6.98e-181 cbiO - - V ko:K01990 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score
PBHJGNOG_01235 3.13e-118 - 3.5.1.28 - M ko:K01448 ko01503,map01503 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 N-acetylmuramoyl-L-alanine amidase
PBHJGNOG_01236 7.12e-232 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_01237 0.0 - - - P - - - Type I phosphodiesterase / nucleotide pyrophosphatase
PBHJGNOG_01238 0.0 - 2.1.3.15, 6.4.1.3 - I ko:K01966 ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Carboxyl transferase domain
PBHJGNOG_01239 4.55e-91 - 6.4.1.1 - I ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Biotin-requiring enzyme
PBHJGNOG_01240 0.0 accC 6.3.4.14, 6.4.1.2, 6.4.1.3 - I ko:K01961,ko:K01965 ko00061,ko00280,ko00620,ko00630,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Biotin carboxylase
PBHJGNOG_01241 1.25e-72 - - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Belongs to the thioredoxin family
PBHJGNOG_01242 9.95e-289 pncB 6.3.4.21 - F ko:K00763 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PBHJGNOG_01243 1.27e-20 - - - - - - - -
PBHJGNOG_01244 3.14e-181 - 1.1.1.159, 1.3.1.25 - IQ ko:K00076,ko:K05783 ko00121,ko00362,ko00364,ko00622,ko01100,ko01120,ko01220,map00121,map00362,map00364,map00622,map01100,map01120,map01220 br01602,ko00000,ko00001,ko00002,ko01000 Oxidoreductase, short chain dehydrogenase reductase family protein
PBHJGNOG_01246 2.06e-233 - - - L - - - Domain of unknown function (DUF1848)
PBHJGNOG_01248 3.51e-193 - - - S - - - COG NOG27239 non supervised orthologous group
PBHJGNOG_01249 1.17e-152 - - - K - - - Helix-turn-helix domain
PBHJGNOG_01250 3.78e-85 - - - S ko:K06996 - ko00000 Glyoxalase-like domain
PBHJGNOG_01251 1.26e-209 - - - K ko:K13652 - ko00000,ko03000 methylphosphotriester-DNA alkyltransferase (AraC XylS family)
PBHJGNOG_01252 3.25e-44 - - - S - - - Winged helix-turn-helix domain (DUF2582)
PBHJGNOG_01253 3.64e-179 proC 1.5.1.2 - E ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PBHJGNOG_01254 9.35e-311 - 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Aspartate kinase
PBHJGNOG_01255 3.36e-306 - - - V - - - COG0534 Na -driven multidrug efflux pump
PBHJGNOG_01256 6.75e-166 - - - L - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01257 3.37e-222 - - - S - - - Protein of unknown function (DUF3137)
PBHJGNOG_01258 5.97e-159 - - - S ko:K03744 - ko00000 LemA family
PBHJGNOG_01259 4.63e-285 - - - MO - - - Bacterial group 3 Ig-like protein
PBHJGNOG_01260 3.89e-90 - - - - - - - -
PBHJGNOG_01261 0.0 - - - S - - - response regulator aspartate phosphatase
PBHJGNOG_01262 1.91e-138 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PBHJGNOG_01264 9.27e-133 - - - S - - - Acetyltransferase (GNAT) domain
PBHJGNOG_01265 5.04e-75 - - - - - - - -
PBHJGNOG_01267 9.24e-189 - - - L - - - COG NOG21178 non supervised orthologous group
PBHJGNOG_01269 4.17e-132 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01270 1.69e-150 rnd - - L - - - 3'-5' exonuclease
PBHJGNOG_01271 4.98e-295 rlmI 2.1.1.191 - J ko:K06969 - ko00000,ko01000,ko03009 SAM-dependent
PBHJGNOG_01272 8.27e-297 nupG - - G ko:K03289,ko:K11537 - ko00000,ko02000 transport of nucleosides, permease protein K03289
PBHJGNOG_01273 1.35e-129 - - - S ko:K08999 - ko00000 Conserved protein
PBHJGNOG_01274 3.05e-170 rsmE 2.1.1.193 - J ko:K09761 - ko00000,ko01000,ko03009 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PBHJGNOG_01275 0.0 - - - S - - - COG NOG26882 non supervised orthologous group
PBHJGNOG_01276 4.68e-153 - - - V ko:K02003 - ko00000,ko00002,ko02000 COG1136 ABC-type antimicrobial peptide transport system ATPase component
PBHJGNOG_01277 1.69e-277 - - - V - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_01278 0.0 - - - P - - - COG NOG29071 non supervised orthologous group
PBHJGNOG_01279 2.47e-222 miaA2 2.5.1.75 - F ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 ko00000,ko00001,ko01000,ko01006,ko03016 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PBHJGNOG_01280 9.77e-230 - - - I - - - lipid kinase, YegS Rv2252 BmrU family
PBHJGNOG_01281 2.13e-187 kdsA 2.5.1.55 - H ko:K01627 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Belongs to the KdsA family
PBHJGNOG_01282 0.0 - - - S ko:K07263 - ko00000,ko01000,ko01002 Belongs to the peptidase M16 family
PBHJGNOG_01283 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_01284 2.69e-165 - - - V ko:K01990 - ko00000,ko00002,ko02000 COG1131 ABC-type multidrug transport system ATPase component
PBHJGNOG_01285 2e-103 - - - - - - - -
PBHJGNOG_01286 3.07e-154 - - - C - - - WbqC-like protein
PBHJGNOG_01287 2.93e-233 lepB_1 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
PBHJGNOG_01288 0.0 lepB 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 signal peptidase i
PBHJGNOG_01289 6.38e-183 dapB 1.17.1.8 - E ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the DapB family
PBHJGNOG_01290 0.0 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01291 0.0 - - - CO - - - COG NOG24773 non supervised orthologous group
PBHJGNOG_01292 1.42e-39 - - - - - - - -
PBHJGNOG_01293 2.29e-48 - - - S - - - COG NOG33922 non supervised orthologous group
PBHJGNOG_01294 2.83e-95 - - - S - - - PcfK-like protein
PBHJGNOG_01295 2.22e-103 - - - L - - - DNA-binding protein
PBHJGNOG_01296 0.0 glyQS 6.1.1.14 - J ko:K01880 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of glycine to tRNA(Gly)
PBHJGNOG_01297 8.89e-143 - 5.2.1.8 - M ko:K01802,ko:K03773 - ko00000,ko01000,ko03110 FkbP-type peptidyl-prolyl cis-trans
PBHJGNOG_01298 4.23e-246 - - - K ko:K02529 - ko00000,ko03000 Psort location Cytoplasmic, score 9.97
PBHJGNOG_01299 2.21e-227 fdh 1.1.1.122 - C ko:K00064 ko00051,ko00053,ko01100,ko01110,ko01120,map00051,map00053,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000 Oxidoreductase, aldo keto reductase family protein
PBHJGNOG_01300 1.38e-224 - - - S ko:K07045 - ko00000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_01301 2.73e-303 fucP - - G ko:K02429 - ko00000,ko02000 L-fucose H symporter permease
PBHJGNOG_01302 1.59e-241 yjmD_1 - - E - - - Psort location Cytoplasmic, score 9.97
PBHJGNOG_01303 0.0 - - - V - - - AcrB/AcrD/AcrF family
PBHJGNOG_01304 0.0 - - - V ko:K03296 - ko00000 AcrB/AcrD/AcrF family
PBHJGNOG_01305 1.42e-247 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Barrel-sandwich domain of CusB or HlyD membrane-fusion
PBHJGNOG_01306 0.0 - - - MU - - - Outer membrane efflux protein
PBHJGNOG_01307 0.0 - - - S - - - ABC-type transport system involved in multi-copper enzyme maturation permease component
PBHJGNOG_01308 3.78e-217 - - - V - - - AAA domain, putative AbiEii toxin, Type IV TA system
PBHJGNOG_01309 1.75e-316 - - - S - - - COG NOG33609 non supervised orthologous group
PBHJGNOG_01310 1.5e-296 - - - - - - - -
PBHJGNOG_01311 2.23e-185 - - - S - - - Exopolysaccharide biosynthesis protein YbjH
PBHJGNOG_01312 3.67e-227 - - - L - - - Phage integrase, N-terminal SAM-like domain
PBHJGNOG_01313 0.0 - 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 35 family
PBHJGNOG_01314 0.0 - - - H - - - Psort location OuterMembrane, score
PBHJGNOG_01315 0.0 - - - - - - - -
PBHJGNOG_01316 1.33e-99 - - - U ko:K03559 - ko00000,ko02000 Biopolymer transport protein ExbD/TolR
PBHJGNOG_01317 1.94e-100 - - - U ko:K03559 - ko00000,ko02000 Biopolymer transport protein ExbD/TolR
PBHJGNOG_01318 0.0 - - - U ko:K03561 - ko00000,ko02000 MotA/TolQ/ExbB proton channel family
PBHJGNOG_01319 1.56e-245 - - - S - - - Leucine rich repeat protein
PBHJGNOG_01320 2.77e-132 - - - S - - - P-loop ATPase and inactivated derivatives
PBHJGNOG_01321 0.0 uxaC 5.3.1.12 - G ko:K01812 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 glucuronate isomerase
PBHJGNOG_01322 5.19e-251 - - - K ko:K02529 - ko00000,ko03000 Psort location Cytoplasmic, score
PBHJGNOG_01323 0.0 uxaB 1.1.1.17, 1.1.1.58 - C ko:K00009,ko:K00041 ko00040,ko00051,ko01100,map00040,map00051,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the mannitol dehydrogenase family. UxaB subfamily
PBHJGNOG_01324 1.19e-124 - - - T - - - FHA domain protein
PBHJGNOG_01325 8.51e-246 - - - D - - - sporulation
PBHJGNOG_01326 4.64e-129 rfbC 5.1.3.13 - G ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PBHJGNOG_01327 1.1e-314 ugd 1.1.1.22 - C ko:K00012 ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PBHJGNOG_01328 1.19e-188 - - - S - - - COG NOG26711 non supervised orthologous group
PBHJGNOG_01329 1.99e-282 deaD - - L - - - Belongs to the DEAD box helicase family
PBHJGNOG_01330 5.82e-177 serB 3.1.3.3 - ET ko:K01079 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01009 Psort location Cytoplasmic, score 8.96
PBHJGNOG_01331 7.65e-49 - - - - - - - -
PBHJGNOG_01333 1.9e-257 - - - S ko:K07098 - ko00000 Calcineurin-like phosphoesterase superfamily domain
PBHJGNOG_01334 1.54e-292 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
PBHJGNOG_01335 3.56e-188 - - - S - - - of the HAD superfamily
PBHJGNOG_01336 0.0 - - - L - - - COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member
PBHJGNOG_01337 0.0 - - - M ko:K07289 - ko00000 protein involved in outer membrane biogenesis
PBHJGNOG_01338 3.2e-149 yciO - - J - - - Belongs to the SUA5 family
PBHJGNOG_01339 3.58e-197 nagB 3.5.99.6 - G ko:K02564 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PBHJGNOG_01340 1.06e-299 fprA 1.6.3.4 - C ko:K22405 - ko00000,ko01000 anaerobic nitric oxide reductase flavorubredoxin
PBHJGNOG_01341 1.47e-81 - - - S ko:K07139 - ko00000 radical SAM protein, TIGR01212 family
PBHJGNOG_01342 2.45e-253 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PBHJGNOG_01343 5.53e-207 thiD 2.7.1.49, 2.7.4.7 - K ko:K00941 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 transcriptional regulator (AraC family)
PBHJGNOG_01344 1.55e-256 bcr - - EGP ko:K03446,ko:K07552 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score
PBHJGNOG_01345 3.88e-300 - - - MU - - - Psort location OuterMembrane, score
PBHJGNOG_01346 1.95e-229 emrA_1 - - V ko:K03543 - ko00000,ko00002,ko02000 Auxiliary transport protein, membrane fusion protein (MFP) family protein
PBHJGNOG_01347 0.0 - - - EGP - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_01348 0.0 maeB 1.1.1.38, 1.1.1.40 - C ko:K00027,ko:K00029 ko00620,ko00710,ko01100,ko01120,ko01200,ko02020,map00620,map00710,map01100,map01120,map01200,map02020 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PBHJGNOG_01349 4.83e-30 - - - - - - - -
PBHJGNOG_01350 1.64e-192 secY - - U ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PBHJGNOG_01351 0.0 bioA 2.6.1.62 - H ko:K00833 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko00002,ko01000,ko01007 the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a
PBHJGNOG_01352 4.23e-269 - - - N - - - Psort location OuterMembrane, score
PBHJGNOG_01353 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_01354 0.0 - - - E ko:K21572 - ko00000,ko02000 COG NOG25454 non supervised orthologous group
PBHJGNOG_01355 4.43e-270 fsr - - G ko:K08223 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_01356 5.76e-266 glxK 2.7.1.165 - G ko:K00865 ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130 ko00000,ko00001,ko01000 Belongs to the glycerate kinase type-1 family
PBHJGNOG_01357 1.3e-26 - - - S - - - Transglycosylase associated protein
PBHJGNOG_01358 5.01e-44 - - - - - - - -
PBHJGNOG_01359 2.31e-244 - - - K ko:K02529 - ko00000,ko03000 Psort location Cytoplasmic, score
PBHJGNOG_01360 3.54e-188 uxuB - - IQ - - - Oxidoreductase, short chain dehydrogenase reductase family protein
PBHJGNOG_01361 4.73e-287 uxuA 4.2.1.8 - H ko:K01686 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the dehydration of D-mannonate
PBHJGNOG_01362 5.46e-136 - 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 COG0847 DNA polymerase III epsilon subunit and related 3'-5'
PBHJGNOG_01363 2.94e-197 - - - K - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01364 1.02e-97 - - - S - - - Pyridoxamine 5'-phosphate oxidase like
PBHJGNOG_01365 4.22e-59 ycnE - - S - - - Antibiotic biosynthesis monooxygenase
PBHJGNOG_01366 5.91e-196 - - - S - - - RteC protein
PBHJGNOG_01367 9.18e-122 - - - S - - - Protein of unknown function (DUF1062)
PBHJGNOG_01368 2.78e-157 - - - S ko:K09807 - ko00000 Protein of unknown function (DUF541)
PBHJGNOG_01369 1.4e-139 - - - L - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01370 5.19e-20 - - - H - - - COG NOG08812 non supervised orthologous group
PBHJGNOG_01371 5.9e-79 - - - - - - - -
PBHJGNOG_01372 1.21e-73 - - - - - - - -
PBHJGNOG_01373 0.0 - - - P ko:K02014 - ko00000,ko02000 COG COG1629 Outer membrane receptor proteins, mostly Fe transport
PBHJGNOG_01374 1.04e-114 - - - S - - - Domain of unknown function (DUF4625)
PBHJGNOG_01375 4.08e-149 nrfH - - C ko:K15876 ko00910,ko01120,map00910,map01120 ko00000,ko00001,ko00002 COG COG3005 Nitrate TMAO reductases, membrane-bound tetraheme cytochrome c subunit
PBHJGNOG_01376 0.0 nrfA 1.7.2.2 - C ko:K03385 ko00910,ko01120,ko05132,map00910,map01120,map05132 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
PBHJGNOG_01377 3.99e-297 ccs1 - - O - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_01379 6.82e-206 - - - S ko:K06894 - ko00000 COG2373 Large extracellular alpha-helical protein
PBHJGNOG_01380 1.61e-253 - - - P - - - Domain of unknown function (DUF4976)
PBHJGNOG_01381 6.43e-239 - - - K - - - transcriptional regulator (AraC family)
PBHJGNOG_01382 4.85e-168 sdhC - - C ko:K00241 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002 Succinate dehydrogenase cytochrome B subunit, b558 family
PBHJGNOG_01383 4.12e-102 - - - O - - - Psort location Extracellular, score
PBHJGNOG_01384 1.46e-160 - - - S - - - Protein of unknown function (DUF1573)
PBHJGNOG_01385 9.64e-102 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01386 3.67e-102 fur - - P ko:K03711,ko:K09825 - ko00000,ko03000 Belongs to the Fur family
PBHJGNOG_01387 2.58e-137 rbr3A - - C - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01388 1.95e-135 - - - C - - - Nitroreductase family
PBHJGNOG_01389 3.57e-108 - - - O - - - Thioredoxin
PBHJGNOG_01390 5.28e-68 - - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Psort location Cytoplasmic, score
PBHJGNOG_01391 1.87e-270 - - - M - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01392 3.69e-37 - - - - - - - -
PBHJGNOG_01393 0.0 - - - S - - - COG NOG06390 non supervised orthologous group
PBHJGNOG_01394 0.0 dpp11 - - E - - - COG NOG04781 non supervised orthologous group
PBHJGNOG_01395 0.0 atsB - - C ko:K06871 - ko00000 COG0641 Arylsulfatase regulator (Fe-S oxidoreductase)
PBHJGNOG_01396 6.32e-169 - - - S - - - COG NOG27017 non supervised orthologous group
PBHJGNOG_01397 0.0 - - - S - - - Tetratricopeptide repeat protein
PBHJGNOG_01398 2.06e-76 - - - S - - - Domain of unknown function (DUF3244)
PBHJGNOG_01399 3.02e-111 - - - CG - - - glycosyl
PBHJGNOG_01400 2.47e-13 - - - - - - - -
PBHJGNOG_01401 1.59e-112 - 3.5.1.28 - V ko:K01447 - ko00000,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_01402 6.66e-281 - - - M - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_01403 0.0 purL 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate
PBHJGNOG_01404 2.05e-147 - - - E - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_01405 2.3e-124 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01406 4.06e-209 rfbD 1.1.1.133 - M ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PBHJGNOG_01407 0.0 prfC - - J ko:K02837 - ko00000,ko03012 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PBHJGNOG_01408 4.91e-131 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PBHJGNOG_01409 1.01e-173 - - - PT - - - FecR protein
PBHJGNOG_01410 8.39e-299 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01411 6.1e-255 - 3.2.1.14 GH18 G ko:K01183 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Glyco_18
PBHJGNOG_01412 1.28e-280 - - - G - - - Domain of unknown function (DUF4971)
PBHJGNOG_01413 0.0 - - - U - - - Putative binding domain, N-terminal
PBHJGNOG_01414 0.0 - - - S - - - Putative binding domain, N-terminal
PBHJGNOG_01415 0.0 - - - F ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_01416 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_01417 0.0 - - - P - - - SusD family
PBHJGNOG_01418 0.0 - - - H - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_01419 0.0 - - - H - - - Psort location OuterMembrane, score
PBHJGNOG_01420 0.0 - - - S - - - Tetratricopeptide repeat protein
PBHJGNOG_01422 5.94e-128 - 3.6.1.55 - F ko:K03574 - ko00000,ko01000,ko03400 NUDIX domain
PBHJGNOG_01423 6.3e-222 - 4.3.3.7 - H ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
PBHJGNOG_01424 0.0 - - - E ko:K03307 - ko00000 alkaline phosphatase synthesis sensor protein phoR K07636
PBHJGNOG_01425 7.09e-136 ahpC 1.11.1.15 - O ko:K03386 ko04214,map04214 ko00000,ko00001,ko01000,ko04147 Psort location Cytoplasmic, score
PBHJGNOG_01426 0.0 ahpF - - C ko:K03387 - ko00000,ko01000 alkyl hydroperoxide reductase subunit F
PBHJGNOG_01427 0.0 - - - S - - - phosphatase family
PBHJGNOG_01428 4.16e-235 - - - G ko:K05340 - ko00000,ko02000 COG NOG04879 non supervised orthologous group
PBHJGNOG_01429 7.32e-247 - - - F - - - Inosine-uridine preferring nucleoside hydrolase
PBHJGNOG_01430 0.0 - - - G - - - Domain of unknown function (DUF4978)
PBHJGNOG_01431 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_01432 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_01433 9.87e-211 rbsK 2.7.1.15 - H ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PBHJGNOG_01434 2.09e-217 rbsK 2.7.1.15 - H ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PBHJGNOG_01435 0.0 - - - - - - - -
PBHJGNOG_01436 1.75e-31 - - - S - - - Winged helix-turn-helix domain (DUF2582)
PBHJGNOG_01437 6.12e-197 suhB 3.1.3.25 - G ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PBHJGNOG_01438 2.7e-170 comF 2.4.2.14 - S ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 ComF family
PBHJGNOG_01440 0.0 katA 1.11.1.6 - P ko:K03781 ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014 ko00000,ko00001,ko00002,ko01000 Belongs to the catalase family
PBHJGNOG_01441 0.0 ppsA - - GKT - - - Pyruvate phosphate dikinase, PEP pyruvate binding domain
PBHJGNOG_01442 0.0 gdh 1.4.1.4 - C ko:K00262 ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100 ko00000,ko00001,ko01000 Belongs to the Glu Leu Phe Val dehydrogenases family
PBHJGNOG_01443 2.62e-283 pepQ 3.4.11.9, 3.4.13.9 - E ko:K01262,ko:K01271 - ko00000,ko01000,ko01002 xaa-pro dipeptidase K01271
PBHJGNOG_01444 0.0 cca 2.7.7.19, 2.7.7.72 - J ko:K00970,ko:K00974 ko03013,ko03018,map03013,map03018 ko00000,ko00001,ko01000,ko03016,ko03019 tRNA nucleotidyltransferase poly(A) polymerase
PBHJGNOG_01445 8.69e-194 - - - - - - - -
PBHJGNOG_01446 3.8e-15 - - - - - - - -
PBHJGNOG_01447 6.53e-250 - - - S - - - COG NOG26961 non supervised orthologous group
PBHJGNOG_01448 2.4e-129 ruvA 3.6.4.12 - L ko:K03550 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PBHJGNOG_01449 1.48e-215 ddh 1.4.1.16 - E ko:K03340 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
PBHJGNOG_01450 1.29e-13 - - - E - - - Domain of Unknown Function with PDB structure (DUF3857)
PBHJGNOG_01451 1.02e-72 - - - - - - - -
PBHJGNOG_01452 9.84e-170 hly-III - - S ko:K11068 - ko00000,ko02042 membrane protein, hemolysin III homolog
PBHJGNOG_01453 1.02e-42 - - - K ko:K07729 - ko00000,ko03000 Helix-turn-helix domain
PBHJGNOG_01454 2.24e-101 - - - - - - - -
PBHJGNOG_01456 4.31e-166 rpiA 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 COG COG0120 Ribose 5-phosphate isomerase
PBHJGNOG_01457 0.0 cfiA 6.4.1.1 - C ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 ko00000,ko00001,ko00002,ko01000 COG5016 Pyruvate oxaloacetate carboxyltransferase
PBHJGNOG_01458 6.95e-282 - 4.1.1.3 - C ko:K01572 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000,ko02000 sodium ion-translocating decarboxylase, beta subunit
PBHJGNOG_01459 1.61e-185 - - - MU - - - Psort location OuterMembrane, score
PBHJGNOG_01461 7.12e-76 - - - - - - - -
PBHJGNOG_01463 2.59e-126 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_01464 0.0 - - - GM ko:K21572 - ko00000,ko02000 Pfam:SusD
PBHJGNOG_01465 0.0 - - - G - - - Lyase, N terminal
PBHJGNOG_01466 0.0 - 3.2.1.51 GH95 G ko:K15923 ko00511,map00511 ko00000,ko00001,ko01000 COG NOG04001 non supervised orthologous group
PBHJGNOG_01467 6.15e-146 - - - S - - - Domain of unknown function (DUF5033)
PBHJGNOG_01468 5.83e-140 - - - M - - - Protein of unknown function (DUF3575)
PBHJGNOG_01469 0.0 - - - M - - - COG NOG23378 non supervised orthologous group
PBHJGNOG_01470 6.89e-34 - - - K - - - Helix-turn-helix domain
PBHJGNOG_01471 9.61e-23 - - - S - - - Phage derived protein Gp49-like (DUF891)
PBHJGNOG_01472 4.34e-151 - - - L - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01473 0.0 mrcA 2.4.1.129, 3.4.16.4 GT51 M ko:K05366 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 COG5009 Membrane carboxypeptidase penicillin-binding protein
PBHJGNOG_01474 2.44e-80 folK2 2.7.6.3 - H ko:K00950 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 COG NOG22185 non supervised orthologous group
PBHJGNOG_01476 3.37e-272 argD 2.6.1.11, 2.6.1.17 - E ko:K00821 ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PBHJGNOG_01477 6.94e-237 argC 1.2.1.38 - E ko:K00145 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PBHJGNOG_01478 5.19e-293 argG 6.3.4.5 - E ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 ko00000,ko00001,ko00002,ko01000,ko04147 argininosuccinate synthase
PBHJGNOG_01479 1.04e-139 - - - J - - - Acetyltransferase (GNAT) domain
PBHJGNOG_01480 1.89e-100 argR - - K ko:K03402 - ko00000,ko03000 Regulates arginine biosynthesis genes
PBHJGNOG_01481 0.0 - - - S - - - PS-10 peptidase S37
PBHJGNOG_01482 1.42e-76 - - - K - - - Transcriptional regulator, MarR
PBHJGNOG_01483 0.0 cdr - - P - - - Belongs to the sulfur carrier protein TusA family
PBHJGNOG_01484 9.32e-317 - - - T ko:K02481 - ko00000,ko02022 acetoacetate metabolism regulatory protein AtoC
PBHJGNOG_01485 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PBHJGNOG_01486 1.33e-295 - 2.7.1.1 - G ko:K00844 ko00010,ko00051,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04910,ko04930,ko04973,ko05230,map00010,map00051,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200,map04066,map04910,map04930,map04973,map05230 ko00000,ko00001,ko00002,ko01000,ko04131 Hexokinase
PBHJGNOG_01488 0.0 - 3.2.1.11 GH66 G ko:K05988 ko00500,map00500 ko00000,ko00001,ko01000 COG NOG34737 non supervised orthologous group
PBHJGNOG_01489 0.0 - - - S ko:K21571 - ko00000 Outer membrane protein SusF_SusE
PBHJGNOG_01490 1.37e-137 - - - GM ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_01493 1.09e-68 yeeR 1.3.1.71, 2.1.1.334 - O ko:K00223,ko:K21310 ko00100,ko00920,ko01100,ko01130,map00100,map00920,map01100,map01130 ko00000,ko00001,ko00002,ko01000 methyltransferase activity
PBHJGNOG_01494 3.6e-47 - - - S - - - Domain of unknown function (DUF3944)
PBHJGNOG_01498 3.93e-128 - - - - - - - -
PBHJGNOG_01499 1.41e-86 - - - - - - - -
PBHJGNOG_01500 3.21e-126 - - - - - - - -
PBHJGNOG_01501 9.57e-305 fabF 2.3.1.179 - I ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PBHJGNOG_01502 4.03e-181 rnc 3.1.26.3 - J ko:K03685 ko03008,ko05205,map03008,map05205 ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PBHJGNOG_01503 5.76e-243 pfkA 2.7.1.11, 2.7.1.90 - F ko:K21071 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PBHJGNOG_01504 0.0 - - - H - - - GH3 auxin-responsive promoter
PBHJGNOG_01505 1.42e-264 mnmA 2.8.1.13 - J ko:K00566 ko04122,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PBHJGNOG_01506 0.0 - 2.7.11.1 - L ko:K08282 - ko00000,ko01000 SNF2 family N-terminal domain
PBHJGNOG_01507 1.75e-188 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01508 0.0 cysS 6.1.1.16 - J ko:K01883 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
PBHJGNOG_01509 0.0 - 4.2.2.20, 4.2.2.21 - H ko:K08961 - ko00000,ko01000 Chondroitin sulfate ABC lyase
PBHJGNOG_01510 1.32e-194 - - - J ko:K10716 - ko00000,ko02000 Transporter, cation channel family protein
PBHJGNOG_01511 3.37e-79 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PBHJGNOG_01512 3.22e-142 mgtC - - S ko:K07507 - ko00000,ko02000 Mg2 transporter-C family protein
PBHJGNOG_01513 7.79e-190 - - - L - - - DNA metabolism protein
PBHJGNOG_01514 7.04e-308 - - - S - - - DNA-binding protein with the Helix-hairpin-helix motif
PBHJGNOG_01516 1.79e-246 - - - M - - - COG2885 Outer membrane protein and related peptidoglycan-associated
PBHJGNOG_01517 0.0 - - - N - - - bacterial-type flagellum assembly
PBHJGNOG_01518 1.24e-221 - - - L - - - Phage integrase, N-terminal SAM-like domain
PBHJGNOG_01519 1.62e-28 - - - S - - - COG NOG16623 non supervised orthologous group
PBHJGNOG_01521 0.0 - - - G - - - Glycosyl hydrolase
PBHJGNOG_01522 0.0 - - - M - - - CotH kinase protein
PBHJGNOG_01523 4.68e-180 - - - S - - - Protein of unknown function (DUF2490)
PBHJGNOG_01524 8.3e-150 - - - S - - - Domain of unknown function (DUF4956)
PBHJGNOG_01525 2.01e-164 - - - S - - - VTC domain
PBHJGNOG_01526 1.12e-234 - - - S - - - Domain of unknown function (DUF4361)
PBHJGNOG_01527 0.0 - - - P ko:K21572 - ko00000,ko02000 Psort location OuterMembrane, score
PBHJGNOG_01528 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_01529 0.0 - - - S - - - IPT TIG domain protein
PBHJGNOG_01530 7.25e-128 - - - G - - - COG NOG09951 non supervised orthologous group
PBHJGNOG_01532 1.7e-299 - - - L - - - Belongs to the 'phage' integrase family
PBHJGNOG_01533 4.44e-123 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
PBHJGNOG_01534 2.31e-182 yaaA - - S ko:K09861 - ko00000 Belongs to the UPF0246 family
PBHJGNOG_01535 2.96e-272 aspA 4.3.1.1 - E ko:K01744 ko00250,ko01100,map00250,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 9.97
PBHJGNOG_01536 6.91e-240 - - - S - - - SMI1-KNR4 cell-wall
PBHJGNOG_01537 1.94e-62 - - - - - - - -
PBHJGNOG_01538 6.58e-113 fecI - - K - - - COG COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
PBHJGNOG_01539 0.0 - - - H - - - Outer membrane protein beta-barrel family
PBHJGNOG_01540 0.0 - - - S - - - Domain of unknown function (DUF5121)
PBHJGNOG_01541 0.0 - 3.2.1.45 GH30 G ko:K01201 ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 30 family
PBHJGNOG_01542 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_01543 6.6e-169 - - - S - - - COG NOG31568 non supervised orthologous group
PBHJGNOG_01544 6.59e-151 aqpZ - - G ko:K06188 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
PBHJGNOG_01545 9.27e-220 - - - EG - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_01546 7.68e-133 oxyR - - K ko:K04761 ko02026,map02026 ko00000,ko00001,ko03000 Psort location Cytoplasmic, score 9.97
PBHJGNOG_01547 2.86e-78 infB - - J ko:K02519 - ko00000,ko03012,ko03029 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PBHJGNOG_01548 2.1e-55 cvpA - - S ko:K03558 - ko00000 Psort location CytoplasmicMembrane, score
PBHJGNOG_01549 0.0 sufB - - O ko:K09014 - ko00000 COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component
PBHJGNOG_01550 2.3e-174 sufC - - O ko:K09013 - ko00000,ko02000 COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component
PBHJGNOG_01551 0.0 sufD - - O ko:K09015 - ko00000 COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component
PBHJGNOG_01552 1.54e-290 sufS 2.8.1.7, 4.4.1.16 - E ko:K11717 ko00450,ko01100,map00450,map01100 ko00000,ko00001,ko01000 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family
PBHJGNOG_01553 2.24e-66 - - - S - - - Belongs to the UPF0145 family
PBHJGNOG_01554 2.15e-28 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 alpha-galactosidase
PBHJGNOG_01555 0.0 hppA 3.6.1.1 - C ko:K15987 ko00190,map00190 ko00000,ko00001,ko01000 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane
PBHJGNOG_01557 2.97e-143 rnhB 3.1.26.4 - L ko:K03470 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PBHJGNOG_01559 0.0 - - - P - - - Psort location OuterMembrane, score
PBHJGNOG_01560 3.64e-221 corA - - P ko:K03284 - ko00000,ko02000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_01561 5.74e-265 - - - J - - - endoribonuclease L-PSP
PBHJGNOG_01562 3.72e-98 - - - - - - - -
PBHJGNOG_01563 6.75e-274 - - - P - - - Psort location OuterMembrane, score
PBHJGNOG_01564 0.0 - - - C - - - Di-haem oxidoreductase, putative peroxidase
PBHJGNOG_01566 2.29e-169 - - - S - - - Psort location CytoplasmicMembrane, score 9.97
PBHJGNOG_01567 3.42e-285 - - - S - - - Psort location OuterMembrane, score
PBHJGNOG_01568 4.72e-240 - 1.8.5.2 - S ko:K16936,ko:K16937 ko00920,ko01120,map00920,map01120 ko00000,ko00001,ko01000 TQO small subunit DoxD
PBHJGNOG_01569 4.1e-84 - - - S - - - Protein of unknown function (DUF2023)
PBHJGNOG_01570 3.75e-119 fldA - - C ko:K03839 - ko00000 Low-potential electron donor to a number of redox enzymes
PBHJGNOG_01571 0.0 - - - S - - - Domain of unknown function (DUF4114)
PBHJGNOG_01572 9.57e-288 purH2 2.1.2.3, 3.5.4.10 - F ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 ko00000,ko00001,ko00002,ko01000,ko04147 COG0138 AICAR transformylase IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
PBHJGNOG_01573 3.41e-168 - - - D ko:K07322 - ko00000 Hemerythrin HHE cation binding domain protein
PBHJGNOG_01574 2.6e-134 - - - K - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01575 2.62e-145 - - - S - - - Psort location Cytoplasmic, score 9.26
PBHJGNOG_01576 7.29e-214 - - - M - - - probably involved in cell wall biogenesis
PBHJGNOG_01577 8.32e-243 - - - M - - - COG COG2148 Sugar transferases involved in lipopolysaccharide synthesis
PBHJGNOG_01578 3.5e-81 - - - T - - - COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PBHJGNOG_01580 0.0 - - - S - - - COG NOG06028 non supervised orthologous group
PBHJGNOG_01581 6.58e-254 ansA 3.5.1.1 - EJ ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 ko00000,ko00001,ko01000 L-asparaginase, type I
PBHJGNOG_01582 1.06e-182 trpA 4.2.1.20 - E ko:K01695 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PBHJGNOG_01583 4.71e-148 trpF 5.3.1.24 - E ko:K01817 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the TrpF family
PBHJGNOG_01584 1.77e-174 trpC 4.1.1.48 - E ko:K01609 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the TrpC family
PBHJGNOG_01585 4.34e-236 trpD 2.4.2.18, 4.1.3.27 - F ko:K00766,ko:K13497 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PBHJGNOG_01586 3.94e-133 trpG 2.6.1.85, 4.1.3.27 - EH ko:K01658,ko:K01664 ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 Glutamine amidotransferase, class I
PBHJGNOG_01587 0.0 trpE 4.1.3.27 - EH ko:K01657 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 Anthranilate synthase component I
PBHJGNOG_01588 4.22e-288 trpB 4.2.1.20, 5.3.1.24 - E ko:K01696,ko:K01817 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PBHJGNOG_01589 2.22e-21 - - - - - - - -
PBHJGNOG_01590 1.02e-277 yqhD - - C ko:K08325 ko00640,map00640 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PBHJGNOG_01591 1.11e-313 - - - T - - - His Kinase A (phosphoacceptor) domain
PBHJGNOG_01592 0.0 - - - P - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_01593 3.44e-208 ppx 3.6.1.11, 3.6.1.40 - FP ko:K01524 ko00230,map00230 ko00000,ko00001,ko01000 Ppx GppA phosphatase family
PBHJGNOG_01594 0.0 ppk 2.7.4.1 - H ko:K00937 ko00190,ko03018,map00190,map03018 ko00000,ko00001,ko01000,ko03019 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PBHJGNOG_01595 2.44e-129 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_01596 7.2e-104 - - - L - - - Belongs to the 'phage' integrase family
PBHJGNOG_01597 4.28e-25 - - - - - - - -
PBHJGNOG_01598 6.39e-27 - - - K - - - Helix-turn-helix domain
PBHJGNOG_01600 1.91e-214 - - - S ko:K06919 - ko00000 Phage plasmid primase, P4 family domain protein
PBHJGNOG_01602 1.02e-196 - - - L - - - COG NOG08810 non supervised orthologous group
PBHJGNOG_01603 1.14e-58 - - - L - - - Endodeoxyribonuclease RusA
PBHJGNOG_01604 3.05e-13 - - - - - - - -
PBHJGNOG_01605 1.47e-68 - - - - - - - -
PBHJGNOG_01606 1.03e-139 - - - - - - - -
PBHJGNOG_01607 2.39e-59 - - - - - - - -
PBHJGNOG_01608 1.34e-67 - - - - - - - -
PBHJGNOG_01611 1.72e-88 - - - - - - - -
PBHJGNOG_01612 3.66e-206 - - - D - - - nuclear chromosome segregation
PBHJGNOG_01615 1.23e-129 fic - - D ko:K04095 - ko00000,ko03036 Fic/DOC family
PBHJGNOG_01616 2.47e-44 - - - K - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01617 6.96e-65 - - - - - - - -
PBHJGNOG_01622 0.0 glnA 6.3.1.2 - S ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 Glutamate--ammonia ligase, catalytic domain protein
PBHJGNOG_01623 0.0 amt - - P ko:K03320 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_01624 8.69e-76 glnB - - K ko:K04751 ko02020,map02020 ko00000,ko00001 Belongs to the P(II) protein family
PBHJGNOG_01625 2.31e-174 - - - S - - - Psort location OuterMembrane, score
PBHJGNOG_01626 2.98e-312 dapL 2.6.1.83 - H ko:K10206 ko00300,ko01100,ko01110,ko01130,ko01230,map00300,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate
PBHJGNOG_01627 2.24e-194 dapF 5.1.1.7 - E ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PBHJGNOG_01628 3.33e-66 - - - CO ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Thioredoxin
PBHJGNOG_01629 3.68e-173 - 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 glycerophosphoryl diester phosphodiesterase
PBHJGNOG_01630 0.0 asnB 6.3.5.4 - E ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 ko00000,ko00001,ko01000,ko01002 Asparagine synthase, glutamine-hydrolyzing
PBHJGNOG_01631 0.0 gltD 1.4.1.13, 1.4.1.14 - E ko:K00266 ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 COG0493 NADPH-dependent glutamate synthase beta chain and related
PBHJGNOG_01632 1.52e-76 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 - E ko:K00265,ko:K00284 ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 GXGXG motif
PBHJGNOG_01633 1.3e-87 - - - - - - - -
PBHJGNOG_01634 5.34e-117 - - - - - - - -
PBHJGNOG_01638 4.89e-127 - - - K - - - transcriptional regulator, LuxR family
PBHJGNOG_01639 2e-60 - - - - - - - -
PBHJGNOG_01640 1.63e-17 - - - L - - - Belongs to the 'phage' integrase family
PBHJGNOG_01641 0.0 - - - M - - - chlorophyll binding
PBHJGNOG_01643 3.19e-06 - - - MP ko:K07798 ko02020,map02020 ko00000,ko00001,ko02000 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PBHJGNOG_01645 1.58e-44 - - - S - - - Domain of unknown function (DUF4361)
PBHJGNOG_01646 3.05e-223 - - - P ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_01647 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_01648 4.71e-174 - - - S - - - NHL repeat
PBHJGNOG_01649 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
PBHJGNOG_01650 0.0 - 3.2.1.51 GH95 G ko:K15923 ko00511,map00511 ko00000,ko00001,ko01000 COG NOG04001 non supervised orthologous group
PBHJGNOG_01652 0.0 - 3.1.6.1 - P ko:K01130 ko00140,ko00600,map00140,map00600 ko00000,ko00001,ko01000 COG COG3119 Arylsulfatase A and related enzymes
PBHJGNOG_01653 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PBHJGNOG_01654 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_01655 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_01656 1.38e-169 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PBHJGNOG_01657 5.58e-103 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PBHJGNOG_01659 1.41e-243 - - - M ko:K16052 - ko00000,ko02000 Mechanosensitive ion channel
PBHJGNOG_01660 0.0 - 3.2.1.41 CBM48,GH13 G ko:K01200 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 13 family
PBHJGNOG_01661 0.0 amyS 3.2.1.1 GH13 G ko:K01176 ko00500,ko01100,ko04973,map00500,map01100,map04973 ko00000,ko00001,ko01000 Alpha-amylase domain
PBHJGNOG_01662 1.28e-229 rlmF 2.1.1.181 - J ko:K06970 - ko00000,ko01000,ko03009 Specifically methylates the adenine in position 1618 of 23S rRNA
PBHJGNOG_01663 0.0 - - - - - - - -
PBHJGNOG_01664 7.73e-255 - - - M ko:K15727 - ko00000,ko02000 Barrel-sandwich domain of CusB or HlyD membrane-fusion
PBHJGNOG_01665 0.0 - - - P ko:K15726 - ko00000,ko02000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PBHJGNOG_01666 1.12e-285 czcC_2 - - MU ko:K15725 - ko00000,ko02000 Outer membrane efflux protein
PBHJGNOG_01667 2.23e-188 - - - M - - - COG NOG10981 non supervised orthologous group
PBHJGNOG_01668 0.0 - - - K - - - COG NOG18216 non supervised orthologous group
PBHJGNOG_01669 1.27e-87 - - - S - - - Protein of unknown function, DUF488
PBHJGNOG_01670 8.32e-294 ydiI 3.1.2.28 - Q ko:K19222 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_01671 4.11e-276 entC 5.4.4.2 - HQ ko:K02361,ko:K02552 ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Isochorismate synthase
PBHJGNOG_01672 0.0 menD 2.2.1.9 - H ko:K02551 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
PBHJGNOG_01673 6.93e-197 menB 4.1.3.36 - H ko:K01661 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PBHJGNOG_01674 1.09e-254 menC - - M - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01675 1.98e-259 menE 6.2.1.26 - IQ ko:K01911 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_01676 3e-133 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor, ECF subfamily
PBHJGNOG_01677 2.48e-219 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PBHJGNOG_01678 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_01682 1.6e-123 - - - S - - - Phage minor structural protein
PBHJGNOG_01683 0.0 - - - S - - - Phage minor structural protein
PBHJGNOG_01684 3.32e-61 - - - - - - - -
PBHJGNOG_01685 4.11e-64 - - - - - - - -
PBHJGNOG_01686 1.53e-147 - - - D - - - Psort location OuterMembrane, score
PBHJGNOG_01687 2.22e-08 - - - G - - - Copper amine oxidase N-terminal domain
PBHJGNOG_01688 4.66e-14 - - - - - - - -
PBHJGNOG_01690 2.78e-111 - - - S - - - Domain of unknown function (DUF4468) with TBP-like fold
PBHJGNOG_01691 1.33e-161 - - - - - - - -
PBHJGNOG_01692 2.72e-107 - - - - - - - -
PBHJGNOG_01693 3.73e-94 - - - - - - - -
PBHJGNOG_01695 1.71e-91 - - - L - - - Bacterial DNA-binding protein
PBHJGNOG_01696 0.0 - - - JKL - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01697 0.0 ccmC - - O - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_01698 2.35e-267 - - - J - - - endoribonuclease L-PSP
PBHJGNOG_01699 7.98e-223 - - - S - - - unsaturated rhamnogalacturonyl hydrolase activity
PBHJGNOG_01700 0.0 - - - C - - - cytochrome c peroxidase
PBHJGNOG_01701 0.0 - - - U - - - Involved in the tonB-independent uptake of proteins
PBHJGNOG_01702 2.12e-164 deoC 4.1.2.4 - F ko:K01619 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PBHJGNOG_01703 2.87e-247 - - - C - - - Zinc-binding dehydrogenase
PBHJGNOG_01704 4.27e-153 xylB 2.7.1.17 - G ko:K00854 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 Carbohydrate kinase, FGGY family protein
PBHJGNOG_01705 0.0 - 2.4.1.11 GT3 G ko:K00693 ko00500,ko01100,ko04151,ko04152,ko04910,ko04922,ko04931,map00500,map01100,map04151,map04152,map04910,map04922,map04931 ko00000,ko00001,ko01000,ko01003 Starch synthase
PBHJGNOG_01706 8.7e-95 ntpK - - C ko:K02124 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002 COG COG0636 F0F1-type ATP synthase, subunit c Archaeal vacuolar-type H -ATPase, subunit K
PBHJGNOG_01707 0.0 - - - C ko:K02123 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002 Belongs to the V-ATPase 116 kDa subunit family
PBHJGNOG_01708 5.05e-131 - - - C ko:K02120 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002 Psort location Cytoplasmic, score 8.96
PBHJGNOG_01709 1.11e-219 ntpB - - C ko:K02118 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002 ATP synthase alpha beta family, nucleotide-binding domain protein
PBHJGNOG_01710 0.0 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
PBHJGNOG_01711 1.96e-45 - - - - - - - -
PBHJGNOG_01712 0.0 - - - S - - - Oxidoreductase family, C-terminal alpha/beta domain
PBHJGNOG_01713 1.41e-178 - 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PBHJGNOG_01714 0.0 - - - S - - - Putative oxidoreductase C terminal domain
PBHJGNOG_01715 3.88e-240 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
PBHJGNOG_01716 1.64e-193 - 3.5.99.6 - G ko:K02564 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
PBHJGNOG_01717 1.91e-191 cydB 1.10.3.14 - C ko:K00426 ko00190,ko01100,ko02020,map00190,map01100,map02020 ko00000,ko00001,ko00002,ko01000 COG1294 Cytochrome bd-type quinol oxidase subunit 2
PBHJGNOG_01719 6e-232 hprA 1.1.1.29 - C ko:K00018 ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PBHJGNOG_01720 3.09e-71 - - - S - - - 23S rRNA-intervening sequence protein
PBHJGNOG_01721 6.2e-302 rarA - - L ko:K07478 - ko00000 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase
PBHJGNOG_01722 0.0 - - - M - - - COG NOG06397 non supervised orthologous group
PBHJGNOG_01723 3.34e-137 hutU 4.2.1.49 - H ko:K01712 ko00340,ko01100,map00340,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
PBHJGNOG_01724 4.39e-213 ftcD 2.1.2.5, 4.3.1.4 - E ko:K00603,ko:K13990 ko00340,ko00670,ko01100,map00340,map00670,map01100 ko00000,ko00001,ko01000,ko03036,ko04147 Glutamate formiminotransferase
PBHJGNOG_01726 9.88e-283 - - - L - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01727 1.02e-198 ddpX 3.4.13.22 - M ko:K08641 ko01502,ko02020,map01502,map02020 ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
PBHJGNOG_01728 5.9e-38 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01729 1.34e-254 prc 3.4.21.102 - M ko:K03797 - ko00000,ko01000,ko01002 Belongs to the peptidase S41A family
PBHJGNOG_01730 0.0 - - - T - - - Psort location CytoplasmicMembrane, score 7.88
PBHJGNOG_01731 0.0 ahcY 3.3.1.1 - H ko:K01251 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko00002,ko01000,ko01009,ko04147 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
PBHJGNOG_01732 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_01733 0.0 - - - MU - - - Psort location OuterMembrane, score
PBHJGNOG_01734 7.28e-246 - - - V ko:K03543 - ko00000,ko00002,ko02000 Auxiliary transport protein, membrane fusion protein (MFP) family protein
PBHJGNOG_01735 0.0 - - - EGP - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_01736 1.2e-175 - - - K - - - methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC XylS family)
PBHJGNOG_01737 2.32e-153 upp 2.4.2.9 - F ko:K00761 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 uracil phosphoribosyltransferase
PBHJGNOG_01738 0.0 - - - P - - - Right handed beta helix region
PBHJGNOG_01739 0.0 - 3.2.1.177 GH31 G ko:K01811 - ko00000,ko01000 Belongs to the glycosyl hydrolase 31 family
PBHJGNOG_01740 0.0 - - - E - - - B12 binding domain
PBHJGNOG_01741 0.0 - - - S ko:K03307 - ko00000 Sodium:solute symporter family
PBHJGNOG_01742 2.92e-46 - - - S - - - Domain of unknown function (DUF4248)
PBHJGNOG_01743 0.0 - - - L - - - COG NOG25561 non supervised orthologous group
PBHJGNOG_01744 1.16e-97 - - - L - - - VirE N-terminal domain protein
PBHJGNOG_01745 2.45e-213 - - - S - - - Domain of unknown function (DUF4958)
PBHJGNOG_01746 0.0 - 4.2.2.8 PL12 M ko:K19052 - ko00000,ko01000 Heparinase II III-like protein
PBHJGNOG_01747 0.0 - 3.2.1.51 GH95 G ko:K15923 ko00511,map00511 ko00000,ko00001,ko01000 COG NOG04001 non supervised orthologous group
PBHJGNOG_01748 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBHJGNOG_01749 1.45e-166 trpB 4.2.1.20 - E ko:K06001 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PBHJGNOG_01750 4.4e-310 - - - - - - - -
PBHJGNOG_01751 0.0 - - - M - - - Calpain family cysteine protease
PBHJGNOG_01752 0.0 - - - P ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_01753 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_01754 0.0 - - - KT - - - Transcriptional regulator, AraC family
PBHJGNOG_01755 0.0 - 3.2.1.51 GH29 G ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 Alpha-L-fucosidase
PBHJGNOG_01756 0.0 - - - - - - - -
PBHJGNOG_01757 0.0 - - - S - - - Peptidase of plants and bacteria
PBHJGNOG_01758 0.0 - - - P ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_01759 0.0 - - - P - - - TonB dependent receptor
PBHJGNOG_01760 0.0 - - - KT - - - Y_Y_Y domain
PBHJGNOG_01761 1e-241 gyrB 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PBHJGNOG_01762 1.17e-141 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01763 0.0 gpmI 5.4.2.12 - G ko:K15633 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PBHJGNOG_01764 5.52e-241 ansA 3.5.1.1 - EJ ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 ko00000,ko00001,ko01000 L-asparaginase, type I
PBHJGNOG_01765 2.77e-291 - - - S ko:K07133 - ko00000 AAA domain
PBHJGNOG_01766 0.0 radA - - O ko:K04485 - ko00000,ko03400 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PBHJGNOG_01767 0.0 - - - S ko:K07137 - ko00000 FAD-dependent
PBHJGNOG_01768 4.54e-138 - - - K - - - COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PBHJGNOG_01769 0.0 - - - P - - - Outer membrane receptor
PBHJGNOG_01770 2.67e-121 - - - K - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01771 3e-249 - - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_01772 0.0 prtQ - - O ko:K08303 ko05120,map05120 ko00000,ko00001,ko01000,ko01002 Psort location Cytoplasmic, score 8.96
PBHJGNOG_01773 1.28e-228 metAA 2.3.1.46 - E ko:K00651 ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PBHJGNOG_01774 3.02e-21 - - - C - - - 4Fe-4S binding domain
PBHJGNOG_01775 7.27e-286 aspC 2.6.1.1 - E ko:K00812 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko01000,ko01007 COG0436 Aspartate tyrosine aromatic aminotransferase
PBHJGNOG_01776 1.81e-294 ribBA 3.5.4.25, 4.1.99.12 - H ko:K14652 ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PBHJGNOG_01777 0.0 - - - S ko:K07091 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Permease, YjgP YjgQ family
PBHJGNOG_01778 5.89e-90 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01779 1.6e-86 rsmI_1 2.1.1.198 - H ko:K07056 - ko00000,ko01000,ko03009 Psort location Cytoplasmic, score 8.96
PBHJGNOG_01780 3.46e-265 - - - I - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_01781 1.04e-211 lipA 2.8.1.8 - H ko:K03644 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
PBHJGNOG_01782 0.0 dpp 3.4.14.5 - EU ko:K01278 ko04974,map04974 ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 Peptidase, S9A B C family, catalytic domain protein
PBHJGNOG_01783 4.02e-212 - - - O - - - SPFH Band 7 PHB domain protein
PBHJGNOG_01784 8.97e-38 - - - S - - - COG NOG17292 non supervised orthologous group
PBHJGNOG_01785 2.32e-67 - - - - - - - -
PBHJGNOG_01786 5.69e-35 - - - - - - - -
PBHJGNOG_01792 7.73e-113 - - - - - - - -
PBHJGNOG_01793 1.62e-167 smtA 2.1.1.223 - J ko:K15460 - ko00000,ko01000,ko03016 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
PBHJGNOG_01794 0.0 lon 3.4.21.53 - O ko:K01338 ko04112,map04112 ko00000,ko00001,ko01000,ko01002 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
PBHJGNOG_01795 1.51e-281 tgt 2.4.2.29 - F ko:K00773 - ko00000,ko01000,ko03016 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PBHJGNOG_01796 8.88e-248 lptG - - S ko:K11720 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Permease, YjgP YjgQ family
PBHJGNOG_01797 3.46e-115 - - - O - - - COG NOG28456 non supervised orthologous group
PBHJGNOG_01798 8.09e-213 - 6.4.1.1 - C ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 ko00000,ko00001,ko00002,ko01000 COG5016 Pyruvate oxaloacetate carboxyltransferase
PBHJGNOG_01799 2.8e-160 mtgA 2.4.1.129 GT51 M ko:K03814 ko00550,map00550 ko00000,ko00001,ko01000,ko01003,ko01011 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
PBHJGNOG_01800 9.48e-131 - - - M - - - COG2885 Outer membrane protein and related peptidoglycan-associated
PBHJGNOG_01802 1.14e-142 - - - - - - - -
PBHJGNOG_01803 0.0 - - - G - - - Domain of unknown function (DUF5127)
PBHJGNOG_01807 1.52e-165 - - - T - - - COG COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
PBHJGNOG_01808 0.0 - 3.1.6.1 - P ko:K01130 ko00140,ko00600,map00140,map00600 ko00000,ko00001,ko01000 Arylsulfatase
PBHJGNOG_01810 4.06e-257 purD 6.3.4.13 - F ko:K01945 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the GARS family
PBHJGNOG_01811 2.41e-235 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_01812 0.0 - - - M ko:K08676 - ko00000,ko01000,ko01002 Tricorn protease homolog
PBHJGNOG_01813 3.66e-225 - - - H - - - Homocysteine S-methyltransferase
PBHJGNOG_01814 9.89e-201 - 2.5.1.105 - S ko:K06897 ko00790,map00790 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_01815 1.89e-123 ogt 2.1.1.63 - H ko:K00567,ko:K10778 - ko00000,ko01000,ko03000,ko03400 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PBHJGNOG_01816 6.38e-130 ywqN - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01817 2.3e-159 - - - K - - - COG COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
PBHJGNOG_01818 0.0 - - - M - - - COG NOG37029 non supervised orthologous group
PBHJGNOG_01820 0.0 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01821 0.0 - - - K - - - Transcriptional regulator
PBHJGNOG_01822 5.5e-202 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01823 0.0 nhaS3 - - P - - - Sodium/hydrogen exchanger family
PBHJGNOG_01824 6.41e-118 - - - S - - - COG NOG28134 non supervised orthologous group
PBHJGNOG_01825 9.13e-282 - - - I - - - COG NOG24984 non supervised orthologous group
PBHJGNOG_01826 0.0 - - - S - - - COG NOG26034 non supervised orthologous group
PBHJGNOG_01827 6.49e-272 nanM - - S - - - COG NOG23382 non supervised orthologous group
PBHJGNOG_01828 6.01e-67 - - - S - - - Domain of unknown function (DUF4907)
PBHJGNOG_01830 4.79e-294 pepC 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
PBHJGNOG_01831 3.66e-167 - - - K - - - Response regulator receiver domain protein
PBHJGNOG_01832 8.02e-276 - - - T - - - Sensor histidine kinase
PBHJGNOG_01833 1.87e-204 - - - K - - - transcriptional regulator (AraC family)
PBHJGNOG_01834 0.0 - - - S - - - Domain of unknown function (DUF4925)
PBHJGNOG_01835 0.0 - - - M ko:K02014 - ko00000,ko02000 Psort location OuterMembrane, score 10.00
PBHJGNOG_01836 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBHJGNOG_01837 0.0 - - - T - - - COG0642 Signal transduction histidine kinase
PBHJGNOG_01838 0.0 - - - T - - - His Kinase A (phosphoacceptor) domain
PBHJGNOG_01839 1.98e-163 - - - S - - - Psort location OuterMembrane, score 9.52
PBHJGNOG_01840 4.9e-205 etfB - - C ko:K03521 - ko00000 COG2086 Electron transfer flavoprotein beta subunit
PBHJGNOG_01841 1.08e-244 etfA - - C ko:K03522 - ko00000,ko04147 Psort location Cytoplasmic, score 8.96
PBHJGNOG_01842 8.32e-19 - - - U ko:K03832 - ko00000,ko02000 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PBHJGNOG_01843 0.0 acd - - C - - - Acyl-CoA dehydrogenase, C-terminal domain
PBHJGNOG_01844 0.0 - 3.4.21.105 - S ko:K19225 - ko00000,ko01000,ko01002 Psort location CytoplasmicMembrane, score
PBHJGNOG_01845 3.84e-89 - - - - - - - -
PBHJGNOG_01846 0.0 - - - C - - - Domain of unknown function (DUF4132)
PBHJGNOG_01847 9.78e-107 msrC 1.8.4.14 - T ko:K08968 ko00270,map00270 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_01848 3.55e-69 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01849 0.0 ctpA 3.4.21.102 - M ko:K03797 - ko00000,ko01000,ko01002 Belongs to the peptidase S41A family
PBHJGNOG_01850 2.25e-105 coaD 2.7.7.3 - H ko:K00954 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PBHJGNOG_01851 0.0 parE - - L ko:K02622 - ko00000,ko01000,ko02048,ko03032,ko03036 COG0187 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit
PBHJGNOG_01852 1.14e-277 yghO - - K - - - COG NOG07967 non supervised orthologous group
PBHJGNOG_01853 0.0 - - - S - - - PQQ enzyme repeat protein
PBHJGNOG_01854 0.0 - - - E - - - Sodium:solute symporter family
PBHJGNOG_01855 1.2e-249 - 2.4.1.281 - G ko:K16212 - ko00000,ko01000 Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
PBHJGNOG_01856 1.47e-210 rhaR_1 - - K - - - transcriptional regulator (AraC family)
PBHJGNOG_01857 7.21e-203 eamA - - EG - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_01858 0.0 - 3.1.1.53 - G ko:K05970 - ko00000,ko01000 COG NOG04984 non supervised orthologous group
PBHJGNOG_01859 0.0 leuS 6.1.1.4 - J ko:K01869 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Belongs to the class-I aminoacyl-tRNA synthetase family
PBHJGNOG_01860 4.24e-218 - - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_01861 1.48e-135 rdgB 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PBHJGNOG_01862 5.39e-188 - - - N ko:K02557 ko02030,ko02040,map02030,map02040 ko00000,ko00001,ko02000,ko02035 COG COG1360 Flagellar motor protein
PBHJGNOG_01863 0.0 - - - G - - - Alpha-1,2-mannosidase
PBHJGNOG_01864 0.0 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 alpha-galactosidase
PBHJGNOG_01865 0.0 - 3.1.1.53 - G ko:K05970 - ko00000,ko01000 Glycosyl hydrolase family 2, sugar binding domain protein
PBHJGNOG_01866 0.0 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 alpha-galactosidase
PBHJGNOG_01867 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBHJGNOG_01868 0.0 - 3.2.1.51 GH95 G ko:K15923 ko00511,map00511 ko00000,ko00001,ko01000 Glycosyl hydrolase family 65, N-terminal domain
PBHJGNOG_01870 0.0 - - - H - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_01871 0.0 - - - P ko:K21572 - ko00000,ko02000 non supervised orthologous group
PBHJGNOG_01872 4.7e-305 - - - S - - - Domain of unknown function (DUF5126)
PBHJGNOG_01873 0.0 - - - S - - - Domain of unknown function
PBHJGNOG_01874 0.0 - - - M - - - Right handed beta helix region
PBHJGNOG_01875 1.02e-159 - - - E - - - GDSL-like Lipase/Acylhydrolase
PBHJGNOG_01876 1.42e-214 - 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 COG0584 Glycerophosphoryl diester phosphodiesterase
PBHJGNOG_01877 0.0 - 3.2.1.20 GH31 E ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Glycosyl-hydrolase 97 C-terminal, oligomerisation
PBHJGNOG_01878 2.01e-151 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
PBHJGNOG_01880 0.0 - 3.6.4.13 - L ko:K05592 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 Belongs to the DEAD box helicase family
PBHJGNOG_01881 0.0 - - - T - - - Response regulator receiver domain protein
PBHJGNOG_01883 1.54e-254 - - - G - - - Glycosyl hydrolase
PBHJGNOG_01884 0.0 - 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 COG COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases
PBHJGNOG_01885 0.0 - - - G - - - IPT/TIG domain
PBHJGNOG_01886 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_01887 0.0 - - - P ko:K21572 - ko00000,ko02000 Pfam:SusD
PBHJGNOG_01888 3.33e-241 - - - S - - - Domain of unknown function (DUF4361)
PBHJGNOG_01889 0.0 - - - G - - - Glycosyl hydrolase family 76
PBHJGNOG_01890 0.0 - - - G - - - Glycosyl hydrolase family 92
PBHJGNOG_01891 0.0 - 3.2.1.20 GH31 M ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 COG NOG06228 non supervised orthologous group
PBHJGNOG_01892 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 beta-galactosidase
PBHJGNOG_01893 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PBHJGNOG_01894 0.0 - - - M - - - Peptidase family S41
PBHJGNOG_01895 1.73e-188 - - - EG - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_01896 0.0 - - - E - - - COG NOG04781 non supervised orthologous group
PBHJGNOG_01897 4.01e-299 - - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_01898 0.0 cap - - S - - - COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PBHJGNOG_01899 2.61e-187 - - - S - - - Phospholipase/Carboxylesterase
PBHJGNOG_01900 4.71e-242 ruvB 3.6.4.12 - L ko:K03551 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PBHJGNOG_01901 1.02e-278 spmA - - S ko:K06373 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_01902 5.5e-97 ybeY - - S - - - Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PBHJGNOG_01903 0.0 - - - O - - - non supervised orthologous group
PBHJGNOG_01904 5.55e-211 - - - - - - - -
PBHJGNOG_01905 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_01906 0.0 - - - P - - - Secretin and TonB N terminus short domain
PBHJGNOG_01907 5.06e-280 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PBHJGNOG_01908 8.04e-129 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PBHJGNOG_01909 2.39e-312 - - - O - - - Domain of unknown function (DUF5118)
PBHJGNOG_01910 0.0 parC - - L ko:K02621 - ko00000,ko01000,ko02048,ko03032,ko03036 COG0188 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) A subunit
PBHJGNOG_01911 8.2e-211 - - - S - - - COG NOG19130 non supervised orthologous group
PBHJGNOG_01912 3.53e-255 - - - M - - - peptidase S41
PBHJGNOG_01914 7.35e-219 - - - G - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01917 5.93e-155 - - - - - - - -
PBHJGNOG_01921 0.0 - - - S - - - Tetratricopeptide repeats
PBHJGNOG_01923 2.42e-100 - - - L - - - regulation of translation
PBHJGNOG_01924 5.04e-47 - - - S - - - Domain of unknown function (DUF4248)
PBHJGNOG_01925 0.0 - - - L - - - COG NOG25561 non supervised orthologous group
PBHJGNOG_01926 5.24e-63 - - - L - - - VirE N-terminal domain protein
PBHJGNOG_01927 0.0 nagB 3.5.99.6 - G ko:K02564 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_01928 0.0 xly - - M - - - fibronectin type III domain protein
PBHJGNOG_01929 5.77e-68 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01930 4.08e-47 - - - O - - - Belongs to the sulfur carrier protein TusA family
PBHJGNOG_01931 0.0 - - - C - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01932 2.06e-197 - - - - - - - -
PBHJGNOG_01933 0.0 mfd - - L ko:K03723 ko03420,map03420 ko00000,ko00001,ko01000,ko03400 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PBHJGNOG_01934 1.45e-180 dpm1 2.4.1.83 GT2 S ko:K00721 ko00510,ko01100,map00510,map01100 ko00000,ko00001,ko01000,ko01003 b-glycosyltransferase, glycosyltransferase family 2 protein
PBHJGNOG_01935 0.0 pyrC 3.5.2.3 - F ko:K01465 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PBHJGNOG_01936 1e-218 metH_2 - - E - - - Vitamin B12 dependent methionine synthase, activation domain
PBHJGNOG_01937 1.58e-116 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PBHJGNOG_01938 2.25e-125 - - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_01939 2.23e-280 - - - S ko:K07098 - ko00000 Ser Thr phosphatase family protein
PBHJGNOG_01940 0.0 sbcC - - L ko:K03546 - ko00000,ko03400 COG0419 ATPase involved in DNA repair
PBHJGNOG_01941 7.69e-293 sbcD - - L ko:K03547 - ko00000,ko03400 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PBHJGNOG_01942 1.16e-200 plsC 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
PBHJGNOG_01943 0.0 dnaG - - L ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PBHJGNOG_01944 2.21e-180 tyrA 1.3.1.12 - E ko:K00210 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 prephenate dehydrogenase
PBHJGNOG_01945 2.15e-83 pheB 5.4.99.5 - E ko:K04516 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_01946 1.07e-185 nhaC - - C ko:K03315 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_01947 2.8e-105 - - - S - - - COG NOG27363 non supervised orthologous group
PBHJGNOG_01948 2.69e-149 narL - - K - - - COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PBHJGNOG_01949 3.08e-266 trmU 2.8.1.13 - J ko:K00566 ko04122,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PBHJGNOG_01950 0.0 - - - M - - - peptidase S41
PBHJGNOG_01951 8.17e-209 - - - S - - - COG NOG30864 non supervised orthologous group
PBHJGNOG_01952 1.46e-197 - 3.1.2.12 CE1 S ko:K01070 ko00680,ko01120,ko01200,map00680,map01120,map01200 ko00000,ko00001,ko01000 esterase
PBHJGNOG_01953 7.37e-103 - - - S - - - COG NOG29214 non supervised orthologous group
PBHJGNOG_01954 0.0 - - - P - - - Psort location OuterMembrane, score
PBHJGNOG_01955 2.39e-179 loiP - - M ko:K07387 - ko00000,ko01000,ko01002 COG0501 Zn-dependent protease with chaperone function
PBHJGNOG_01957 0.0 - - - P - - - Psort location OuterMembrane, score
PBHJGNOG_01958 0.0 aspD 4.1.1.12 - E ko:K09758 ko00250,ko00270,ko01100,ko01230,map00250,map00270,map01100,map01230 ko00000,ko00001,ko01000 COG COG0436 Aspartate tyrosine aromatic aminotransferase
PBHJGNOG_01959 3.04e-60 aspT - - S ko:K07085 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_01960 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBHJGNOG_01961 0.0 cpdB 3.1.3.6, 3.1.4.16 - F ko:K01119 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the 5'-nucleotidase family
PBHJGNOG_01962 2.17e-213 - - - K - - - methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC XylS family)
PBHJGNOG_01963 4.57e-135 - - - T - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01964 2.69e-174 - - - S - - - Domain of Unknown Function with PDB structure
PBHJGNOG_01965 5.34e-42 - - - - - - - -
PBHJGNOG_01966 4.12e-216 - - - CO - - - COG NOG24773 non supervised orthologous group
PBHJGNOG_01967 3.95e-122 - - - S - - - COG NOG28211 non supervised orthologous group
PBHJGNOG_01968 0.0 chonabc 4.2.2.20, 4.2.2.21 - N ko:K08961 - ko00000,ko01000 Chondroitin sulfate ABC lyase
PBHJGNOG_01969 7.35e-304 - - - - - - - -
PBHJGNOG_01970 4.38e-160 - - - S - - - KilA-N domain
PBHJGNOG_01971 5.44e-230 dus - - H - - - Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PBHJGNOG_01972 0.0 - - - M - - - Domain of unknown function (DUF4955)
PBHJGNOG_01973 0.0 - - - S - - - COG NOG38840 non supervised orthologous group
PBHJGNOG_01974 1.9e-258 - - - S - - - Domain of unknown function (DUF5017)
PBHJGNOG_01975 0.0 - - - GM ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_01976 1.71e-189 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_01977 2.23e-37 - - - P - - - Carboxypeptidase regulatory-like domain
PBHJGNOG_01978 0.0 - - - NPU - - - Psort location OuterMembrane, score 9.49
PBHJGNOG_01979 0.0 - - - H - - - COG NOG26372 non supervised orthologous group
PBHJGNOG_01980 5.59e-90 divK - - T - - - Response regulator receiver domain protein
PBHJGNOG_01981 7.18e-233 - - - C - - - 4Fe-4S binding domain
PBHJGNOG_01982 6.78e-308 tilS 6.3.4.19 - D ko:K04075 - ko00000,ko01000,ko03016 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PBHJGNOG_01983 0.0 feoB - - P ko:K04759 - ko00000,ko02000 transporter of a GTP-driven Fe(2 ) uptake system
PBHJGNOG_01984 5.7e-48 - - - - - - - -
PBHJGNOG_01986 1.52e-109 - - - L - - - Belongs to the 'phage' integrase family
PBHJGNOG_01987 1.58e-128 thyA 2.1.1.45 - F ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PBHJGNOG_01988 1.74e-90 - - - V - - - N-acetylmuramoyl-L-alanine amidase
PBHJGNOG_01991 5.16e-17 - - - - - - - -
PBHJGNOG_01992 1.73e-51 - - - - - - - -
PBHJGNOG_01993 0.0 - - - S - - - Phage minor structural protein
PBHJGNOG_01994 3.39e-75 - - - S - - - Phage minor structural protein
PBHJGNOG_01997 2.85e-228 - - - - - - - -
PBHJGNOG_01998 0.0 - - - S - - - Phage-related minor tail protein
PBHJGNOG_01999 9.11e-108 - - - - - - - -
PBHJGNOG_02000 4.45e-66 - - - - - - - -
PBHJGNOG_02006 5.68e-13 - - - N - - - Periplasmic or secreted lipoprotein
PBHJGNOG_02007 1.12e-39 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_02008 4.85e-123 - - - S - - - KAP family P-loop domain
PBHJGNOG_02010 3.17e-09 - - - - - - - -
PBHJGNOG_02011 2.82e-35 - - - - - - - -
PBHJGNOG_02012 8.64e-36 - - - - - - - -
PBHJGNOG_02013 2e-18 - - - KT - - - Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PBHJGNOG_02015 6.15e-157 rfbD 1.1.1.133 - M ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PBHJGNOG_02016 2.13e-291 - - - S - - - Clostripain family
PBHJGNOG_02017 5.37e-209 - - - K - - - transcriptional regulator (AraC family)
PBHJGNOG_02018 8.6e-220 - - - K - - - transcriptional regulator (AraC family)
PBHJGNOG_02019 1.54e-248 - - - GM - - - NAD(P)H-binding
PBHJGNOG_02020 9.76e-120 - - - S - - - COG NOG28927 non supervised orthologous group
PBHJGNOG_02021 3.26e-160 - - - K - - - COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PBHJGNOG_02022 3.37e-254 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBHJGNOG_02023 0.0 - - - CO - - - COG NOG39333 non supervised orthologous group
PBHJGNOG_02024 6.77e-307 serS 6.1.1.11 - J ko:K01875 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Psort location Cytoplasmic, score
PBHJGNOG_02025 3.56e-269 gluP - - G ko:K02429 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02026 0.0 gltA 1.3.1.1, 1.4.1.13, 1.4.1.14 - C ko:K00266,ko:K17722 ko00240,ko00250,ko00410,ko00770,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00240,map00250,map00410,map00770,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 9.97
PBHJGNOG_02027 5.05e-79 panD 4.1.1.11 - H ko:K01579 ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
PBHJGNOG_02031 3.29e-30 - - - - - - - -
PBHJGNOG_02032 6.01e-33 rpsU - - J ko:K02970 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bS21 family
PBHJGNOG_02033 0.0 - 3.4.11.9 - E ko:K01262 - ko00000,ko01000,ko01002 COG0006 Xaa-Pro aminopeptidase
PBHJGNOG_02034 7.49e-250 agcS - - E ko:K03310 - ko00000 amino acid carrier protein
PBHJGNOG_02035 1.52e-150 - - - S - - - COG NOG25304 non supervised orthologous group
PBHJGNOG_02036 0.0 eam 5.4.3.2 - E ko:K01843 ko00310,map00310 ko00000,ko00001,ko01000 KamA family
PBHJGNOG_02037 2.41e-297 pbuX - - F ko:K16345 - ko00000,ko02000 xanthine permease
PBHJGNOG_02038 8.76e-176 - - - S - - - COG NOG09956 non supervised orthologous group
PBHJGNOG_02039 0.0 - - - S - - - COG NOG26858 non supervised orthologous group
PBHJGNOG_02040 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_02041 1.49e-112 mug - - L - - - COG3663 G T U mismatch-specific DNA glycosylase
PBHJGNOG_02042 1.51e-80 - 1.20.4.1 - P ko:K00537 - ko00000,ko01000 Belongs to the ArsC family
PBHJGNOG_02044 0.0 - - - S ko:K07114 - ko00000,ko02000 Von Willebrand factor type A domain protein
PBHJGNOG_02045 5.32e-125 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PBHJGNOG_02046 0.0 - - - M - - - Glycosyltransferase, group 1 family protein
PBHJGNOG_02047 4.33e-184 - - - S - - - Glycosyltransferase, group 2 family protein
PBHJGNOG_02048 0.0 - - - G - - - Glycosyl hydrolase family 115
PBHJGNOG_02049 0.0 - - - M - - - Belongs to the glycosyl hydrolase 43 family
PBHJGNOG_02051 4.25e-217 - - - E - - - COG NOG17363 non supervised orthologous group
PBHJGNOG_02052 0.0 - - - G - - - unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
PBHJGNOG_02053 2.29e-184 - - - S - - - Fimbrillin-A associated anchor proteins Mfa1 and Mfa2
PBHJGNOG_02056 2.48e-48 rpsT - - J ko:K02968 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 16S ribosomal RNA
PBHJGNOG_02057 0.0 - - - G - - - Glycosyl hydrolase family 20, catalytic domain
PBHJGNOG_02058 0.0 - - - E ko:K21572 - ko00000,ko02000 Pfam:SusD
PBHJGNOG_02059 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_02060 3.7e-234 - - - PT - - - Domain of unknown function (DUF4974)
PBHJGNOG_02061 2.01e-121 - - - K ko:K03088 - ko00000,ko03021 ECF sigma factor
PBHJGNOG_02062 6.02e-250 - - - S - - - Endonuclease Exonuclease phosphatase family
PBHJGNOG_02063 0.0 pepD_1 - - E ko:K01270 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 Psort location Cytoplasmic, score 8.96
PBHJGNOG_02064 5.49e-42 - - - S - - - COG NOG35566 non supervised orthologous group
PBHJGNOG_02065 2.76e-126 - - - M ko:K06142 - ko00000 membrane
PBHJGNOG_02066 1.66e-73 - - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_02067 3.57e-62 - - - D - - - Septum formation initiator
PBHJGNOG_02068 0.0 dnaX 2.7.7.7 - H ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PBHJGNOG_02069 5.09e-49 - - - KT - - - PspC domain protein
PBHJGNOG_02071 1.37e-269 - - - M ko:K07282 - ko00000 Bacterial capsule synthesis protein
PBHJGNOG_02072 5.56e-77 folD 1.5.1.5, 3.5.4.9 - F ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PBHJGNOG_02073 4.8e-72 rpoZ - - S - - - COG NOG14434 non supervised orthologous group
PBHJGNOG_02074 2.75e-95 - - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_02075 4.99e-164 - - - S - - - Outer membrane protein beta-barrel domain
PBHJGNOG_02076 0.0 lysM - - M - - - LysM domain
PBHJGNOG_02077 0.0 uvrA2 - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PBHJGNOG_02078 4.82e-113 ybaK - - H ko:K03976 - ko00000,ko01000,ko03016 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PBHJGNOG_02079 0.0 - - - P ko:K03305 - ko00000 amino acid peptide transporter
PBHJGNOG_02080 3.23e-123 paiA - - K - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_02081 6.67e-86 - - - K ko:K10947 - ko00000,ko03000 transcriptional regulator PadR family
PBHJGNOG_02082 1.09e-236 - - - KT ko:K03973 - ko00000,ko02048,ko03000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02083 2.68e-255 - - - S - - - of the beta-lactamase fold
PBHJGNOG_02084 2.44e-120 - - - S - - - COG COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
PBHJGNOG_02085 1.76e-160 - - - - - - - -
PBHJGNOG_02086 0.0 pop - - EU - - - Peptidase, S9A B C family, catalytic domain protein
PBHJGNOG_02087 7.51e-316 - - - V - - - MATE efflux family protein
PBHJGNOG_02088 8.6e-155 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins
PBHJGNOG_02089 1.15e-117 rplC - - J ko:K02906 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PBHJGNOG_02090 6.14e-140 rplD - - J ko:K02926 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the polypeptide exit tunnel
PBHJGNOG_02091 1.55e-61 rplW - - J ko:K02892 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PBHJGNOG_02092 1.56e-232 - - - G - - - Kinase, PfkB family
PBHJGNOG_02093 0.0 - - - T - - - cheY-homologous receiver domain
PBHJGNOG_02094 5.72e-198 truA 5.4.99.12 - J ko:K06173 - ko00000,ko01000,ko03016 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PBHJGNOG_02095 7.53e-209 - - - EG ko:K08978 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02096 4.66e-148 - - - S - - - COG NOG19149 non supervised orthologous group
PBHJGNOG_02097 1.65e-267 mdsC - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_02098 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 COG3250 Beta-galactosidase beta-glucuronidase
PBHJGNOG_02099 1.58e-210 - - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_02100 0.0 - - - S - - - Oxidoreductase NAD-binding domain protein
PBHJGNOG_02101 0.0 - - - E - - - COG NOG04153 non supervised orthologous group
PBHJGNOG_02102 9.28e-308 - - - S - - - Domain of unknown function (DUF1735)
PBHJGNOG_02103 0.0 - - - P ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_02104 0.0 - - - H - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_02105 2.41e-155 - - - PT - - - COG NOG28383 non supervised orthologous group
PBHJGNOG_02106 5.27e-68 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PBHJGNOG_02107 4.27e-291 - - - K - - - Outer membrane protein beta-barrel domain
PBHJGNOG_02108 1.4e-144 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PBHJGNOG_02109 3.23e-309 - - - O - - - protein conserved in bacteria
PBHJGNOG_02110 0.0 - - - S - - - COG NOG30867 non supervised orthologous group
PBHJGNOG_02111 5.09e-217 yrbG - - P ko:K07301 - ko00000,ko02000 K -dependent Na Ca exchanger
PBHJGNOG_02112 0.0 - - - G - - - Glycogen debranching enzyme
PBHJGNOG_02113 4.93e-231 - - - G - - - Belongs to the glycosyl hydrolase 43 family
PBHJGNOG_02114 0.0 - - - M ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_02115 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_02116 7.56e-243 - - - PT - - - Domain of unknown function (DUF4974)
PBHJGNOG_02117 5.68e-133 - - - K ko:K03088 - ko00000,ko03021 ECF sigma factor
PBHJGNOG_02118 0.0 - 3.2.1.177 GH31 G ko:K01811 - ko00000,ko01000 Belongs to the glycosyl hydrolase 31 family
PBHJGNOG_02119 0.0 - - - H - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_02120 3.23e-231 - - - P ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_02121 1.55e-80 - - - L - - - HNH nucleases
PBHJGNOG_02122 8.81e-16 - - - L - - - Reverse transcriptase (RNA-dependent DNA polymerase)
PBHJGNOG_02123 1.18e-12 - - - L - - - Reverse transcriptase (RNA-dependent DNA polymerase)
PBHJGNOG_02124 1.02e-208 - - - E - - - COG NOG14456 non supervised orthologous group
PBHJGNOG_02125 0.0 - - - E - - - COG COG2755 Lysophospholipase L1 and related esterases
PBHJGNOG_02126 3.76e-67 - - - E - - - COG NOG19114 non supervised orthologous group
PBHJGNOG_02127 0.0 czcA - - V ko:K03296 - ko00000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PBHJGNOG_02128 4.17e-237 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PBHJGNOG_02129 2.55e-305 - - - MU - - - Psort location OuterMembrane, score
PBHJGNOG_02130 7.15e-145 - - - K - - - transcriptional regulator, TetR family
PBHJGNOG_02131 0.0 hutH 4.3.1.3 - E ko:K01745 ko00340,ko01100,map00340,map01100 ko00000,ko00001,ko00002,ko01000 Histidine ammonia-lyase
PBHJGNOG_02132 1.67e-133 fchA - - E - - - COG3404 Methenyl tetrahydrofolate cyclohydrolase
PBHJGNOG_02133 5.61e-204 hutI 3.5.2.7 - F ko:K01468 ko00340,ko01100,map00340,map01100 ko00000,ko00001,ko00002,ko01000 Imidazolone-5-propionate hydrolase
PBHJGNOG_02134 1.96e-226 - - - CO - - - COG NOG24939 non supervised orthologous group
PBHJGNOG_02135 0.0 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_02136 0.0 - 2.7.13.3 - T ko:K02484,ko:K07636 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBHJGNOG_02137 2.21e-157 srrA - - K ko:K07657,ko:K07658 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PBHJGNOG_02138 3.9e-284 - - - T - - - COG NOG06399 non supervised orthologous group
PBHJGNOG_02139 1.58e-199 - - - S - - - COG NOG25193 non supervised orthologous group
PBHJGNOG_02140 0.0 - - - V - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PBHJGNOG_02141 4.03e-241 - - - M - - - Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PBHJGNOG_02142 4.78e-55 rpmE2 - - J ko:K02909 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L31
PBHJGNOG_02143 6.71e-241 fba 4.1.2.13 - G ko:K01624 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PBHJGNOG_02144 3.16e-313 - - - S - - - Tetratricopeptide repeat protein
PBHJGNOG_02145 3.33e-265 oadB 4.1.1.3 - C ko:K01572 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000,ko02000 sodium ion-translocating decarboxylase, beta subunit
PBHJGNOG_02146 9.54e-81 mmdC - - I - - - first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PBHJGNOG_02147 4.4e-216 - - - C - - - Lamin Tail Domain
PBHJGNOG_02148 0.0 mmdA - - I - - - COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
PBHJGNOG_02149 2.75e-91 mce 5.1.99.1 - E ko:K05606 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_02150 6.24e-245 - - - V - - - COG NOG22551 non supervised orthologous group
PBHJGNOG_02151 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_02152 0.0 - - - E ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_02153 3.25e-127 cah 4.2.1.1 - P ko:K01673 ko00910,map00910 ko00000,ko00001,ko01000 Reversible hydration of carbon dioxide
PBHJGNOG_02154 2.18e-120 - - - C - - - Nitroreductase family
PBHJGNOG_02155 3.12e-68 - - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_02156 7.14e-185 - - - S - - - NADP oxidoreductase coenzyme F420-dependent
PBHJGNOG_02157 1.77e-124 kdsC 3.1.3.45 - S ko:K03270 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family
PBHJGNOG_02158 5.15e-136 maf - - D ko:K06287 - ko00000 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation
PBHJGNOG_02159 0.0 - - - S - - - Tetratricopeptide repeat protein
PBHJGNOG_02160 1.13e-250 - - - P - - - phosphate-selective porin O and P
PBHJGNOG_02161 5.06e-196 - - - P ko:K02051 - ko00000,ko00002,ko02000 NMT1/THI5 like
PBHJGNOG_02162 3.7e-297 pgk 2.7.2.3 - F ko:K00927 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Psort location Cytoplasmic, score
PBHJGNOG_02163 7.78e-165 nth 4.2.99.18 - L ko:K10773 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PBHJGNOG_02164 5.43e-178 - - - EGP - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02165 0.0 - - - M - - - COG NOG36677 non supervised orthologous group
PBHJGNOG_02166 0.0 - - - M - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02167 5.67e-180 - - - S ko:K07011 - ko00000 Glycosyltransferase, group 2 family protein
PBHJGNOG_02168 1.82e-112 - - - S - - - COG NOG29454 non supervised orthologous group
PBHJGNOG_02169 0.0 glgB 2.4.1.18 CBM48,GH13 G ko:K00700 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 1,4-alpha-glucan branching enzyme
PBHJGNOG_02170 7.88e-100 tabA_2 - - G - - - YhcH YjgK YiaL family protein
PBHJGNOG_02171 8.44e-168 - - - S - - - TIGR02453 family
PBHJGNOG_02173 1.7e-205 czcD - - P ko:K16264 - ko00000,ko02000 cation diffusion facilitator family transporter
PBHJGNOG_02174 1.12e-192 - - - S - - - Calycin-like beta-barrel domain
PBHJGNOG_02175 1.15e-159 - - - S - - - HmuY protein
PBHJGNOG_02176 0.0 hmuR - - P ko:K16089 - ko00000,ko02000 COG4771 Outer membrane receptor for ferrienterochelin and colicins
PBHJGNOG_02178 0.0 mutS2 - - L ko:K07456 ko03430,map03430 ko00000,ko00001,ko03400 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PBHJGNOG_02179 9.18e-212 pyrD 1.3.1.14, 1.3.98.1 - F ko:K00226,ko:K17828 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PBHJGNOG_02180 5.05e-161 trmD 2.1.1.228 - J ko:K00554 - ko00000,ko01000,ko03016 Belongs to the RNA methyltransferase TrmD family
PBHJGNOG_02181 0.0 ligA 6.5.1.2 - L ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 ko00000,ko00001,ko01000,ko03032,ko03400 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PBHJGNOG_02182 1.93e-210 dapA 4.3.3.7 - EM ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PBHJGNOG_02183 5.15e-33 - - - CO - - - amine dehydrogenase activity
PBHJGNOG_02184 0.0 - - - H - - - cobalamin-transporting ATPase activity
PBHJGNOG_02185 4.68e-177 - - - P ko:K21572 - ko00000,ko02000 non supervised orthologous group
PBHJGNOG_02186 4.49e-180 - - - S - - - COG NOG26951 non supervised orthologous group
PBHJGNOG_02187 8.25e-131 kdpC 3.6.3.12 - P ko:K01548 ko02020,map02020 ko00000,ko00001,ko01000 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
PBHJGNOG_02188 0.0 kdpB 3.6.3.12 - P ko:K01547 ko02020,map02020 ko00000,ko00001,ko01000 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
PBHJGNOG_02189 0.0 kdpA 3.6.3.12 - P ko:K01546 ko02020,map02020 ko00000,ko00001,ko01000 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
PBHJGNOG_02190 0.0 - - - T - - - COG COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
PBHJGNOG_02191 0.0 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_02192 6.89e-177 hddC - - JM - - - COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon)
PBHJGNOG_02193 4.25e-167 - - - S - - - PD-(D/E)XK nuclease family transposase
PBHJGNOG_02194 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_02195 4.17e-308 - - - S ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_02196 7.56e-184 - - - G - - - Domain of unknown function (DUF5014)
PBHJGNOG_02197 0.0 betC_2 - - P - - - COG COG3119 Arylsulfatase A and related enzymes
PBHJGNOG_02198 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
PBHJGNOG_02199 0.0 lacZ 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 COG3250 Beta-galactosidase beta-glucuronidase
PBHJGNOG_02201 5.04e-55 - - - M - - - Leucine rich repeats (6 copies)
PBHJGNOG_02202 1.87e-132 - - - K - - - KOW (Kyprides, Ouzounis, Woese) motif.
PBHJGNOG_02203 0.0 - - - O - - - COG COG0457 FOG TPR repeat
PBHJGNOG_02204 1.82e-174 trmH 2.1.1.185 - J ko:K03218,ko:K03437 - ko00000,ko01000,ko03009,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PBHJGNOG_02205 0.0 recN - - L ko:K03631 - ko00000,ko03400 May be involved in recombinational repair of damaged DNA
PBHJGNOG_02206 1.53e-221 coaBC 4.1.1.36, 6.3.2.5 - H ko:K13038 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PBHJGNOG_02208 7.12e-22 - - - - - - - -
PBHJGNOG_02210 4.26e-65 - - - S - - - Domain of unknown function (DUF5053)
PBHJGNOG_02213 1.43e-209 - - - S - - - Phage Terminase
PBHJGNOG_02214 9.77e-73 - - - S - - - Phage portal protein
PBHJGNOG_02215 6.49e-62 - - - S ko:K06904 - ko00000 Caudovirus prohead serine protease
PBHJGNOG_02216 0.0 - 3.2.1.40 - G ko:K05989 - ko00000,ko01000 Alpha-L-rhamnosidase N-terminal domain protein
PBHJGNOG_02217 0.0 - - - S - - - Psort location Extracellular, score
PBHJGNOG_02220 7.21e-205 - - - IQ - - - Oxidoreductase, short chain dehydrogenase reductase family protein
PBHJGNOG_02221 1.83e-185 - - - M ko:K07001 - ko00000 Patatin-like phospholipase
PBHJGNOG_02222 0.0 - - - Q - - - cephalosporin-C deacetylase activity
PBHJGNOG_02223 0.0 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PBHJGNOG_02224 0.0 - 3.2.1.40 - G ko:K05989 - ko00000,ko01000 Alpha-L-rhamnosidase N-terminal domain protein
PBHJGNOG_02225 0.0 hypBA2 - - G - - - BNR repeat-like domain
PBHJGNOG_02226 2.55e-216 - - - G - - - Belongs to the glycosyl hydrolase 43 family
PBHJGNOG_02227 1.33e-150 - - - S - - - Protein of unknown function (DUF3826)
PBHJGNOG_02228 0.0 - - - G - - - pectate lyase K01728
PBHJGNOG_02229 0.0 - - - F ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_02230 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_02231 1.18e-91 - - - S - - - Domain of unknown function
PBHJGNOG_02232 4.94e-215 - - - G - - - Xylose isomerase-like TIM barrel
PBHJGNOG_02234 2.03e-254 - 2.4.1.319, 2.4.1.320 - G ko:K18785 - ko00000,ko01000 glycosylase
PBHJGNOG_02235 6.3e-308 ampG - - EGP ko:K08218 ko01501,map01501 ko00000,ko00001,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02236 0.0 - - - G - - - Domain of unknown function (DUF4838)
PBHJGNOG_02237 0.0 - - - S - - - Domain of unknown function (DUF1735)
PBHJGNOG_02238 1.14e-288 - - - S - - - Concanavalin A-like lectin/glucanases superfamily
PBHJGNOG_02239 2.06e-263 - - - G - - - Glycosyl hydrolases family 18
PBHJGNOG_02240 0.0 - - - S - - - non supervised orthologous group
PBHJGNOG_02241 0.0 - - - P - - - TonB dependent receptor
PBHJGNOG_02242 0.0 porA 1.2.7.11, 1.2.7.3 - C ko:K00174 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 2-oxoacid acceptor oxidoreductase, alpha subunit
PBHJGNOG_02243 2.28e-249 oorB 1.2.7.11, 1.2.7.3 - C ko:K00175 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin
PBHJGNOG_02244 1.58e-281 lolE - - M ko:K09808,ko:K09815 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 COG4591 ABC-type transport system, involved in lipoprotein release, permease component
PBHJGNOG_02245 4.13e-68 rbfA - - J ko:K02834 - ko00000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PBHJGNOG_02246 3.18e-153 mdmC 2.1.1.104 - S ko:K00588 ko00360,ko00940,ko00941,ko00945,ko01100,ko01110,map00360,map00940,map00941,map00945,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PBHJGNOG_02247 0.0 pyk 2.7.1.40 - G ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Pyruvate kinase
PBHJGNOG_02248 9.8e-97 aroQ 4.2.1.10 - E ko:K03786 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes a trans-dehydration via an enolate intermediate
PBHJGNOG_02249 1.67e-222 xerC - - D ko:K04763 - ko00000,ko03036 Tyrosine recombinase XerC
PBHJGNOG_02250 0.0 - - - S - - - Tetratricopeptide repeat protein
PBHJGNOG_02251 3.7e-259 - - - CO - - - AhpC TSA family
PBHJGNOG_02252 0.0 comM - - O ko:K07391 - ko00000 Magnesium chelatase, subunit ChlI
PBHJGNOG_02253 0.0 - - - S - - - Tetratricopeptide repeat protein
PBHJGNOG_02254 7.16e-300 - - - S - - - aa) fasta scores E()
PBHJGNOG_02255 6.85e-256 - 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Converts alpha-aldose to the beta-anomer
PBHJGNOG_02256 2.63e-149 - 3.1.3.10, 3.1.3.104 - S ko:K07025,ko:K20866,ko:K21063 ko00010,ko00740,ko01100,ko01110,ko01120,map00010,map00740,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000 HAD hydrolase, family IA, variant 3
PBHJGNOG_02257 4.25e-249 - - - S - - - Tetratricopeptide repeat
PBHJGNOG_02258 0.0 - - - EG - - - Protein of unknown function (DUF2723)
PBHJGNOG_02259 4.3e-44 fjo13 - - S - - - COG NOG19122 non supervised orthologous group
PBHJGNOG_02260 1.49e-121 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor, ECF subfamily K00960
PBHJGNOG_02261 1.22e-222 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PBHJGNOG_02262 0.0 - - - P - - - Carboxypeptidase regulatory-like domain
PBHJGNOG_02263 4.89e-218 romA - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_02264 3.53e-63 nuoK 1.6.5.3 - C ko:K00340 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PBHJGNOG_02265 9.81e-107 nuoJ 1.6.5.3 - C ko:K00339 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 COG0839 NADH ubiquinone oxidoreductase subunit 6 (chain J)
PBHJGNOG_02266 1.31e-183 - 3.2.2.23, 4.2.99.18 - L ko:K10563 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Formamidopyrimidine-DNA glycosylase H2TH domain
PBHJGNOG_02267 0.0 - - - M ko:K07071 - ko00000 Domain of unknown function (DUF1731)
PBHJGNOG_02268 9.54e-61 - - - S ko:K06975 - ko00000 GCN5-related N-acetyl-transferase
PBHJGNOG_02269 4.6e-62 - - - S - - - COG NOG23408 non supervised orthologous group
PBHJGNOG_02270 1.94e-166 - - - S - - - Oxidoreductase, short chain dehydrogenase reductase family protein
PBHJGNOG_02271 0.0 trkH - - P ko:K03498 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02272 5.23e-69 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_02273 6.64e-56 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_02274 2.93e-313 mepA_7 - - V - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02275 4.87e-234 - - - S - - - Fimbrillin-like
PBHJGNOG_02276 0.0 rluA 5.4.99.28, 5.4.99.29 - J ko:K06177 - ko00000,ko01000,ko03009,ko03016 Pseudouridine synthase, RluA family
PBHJGNOG_02277 1.34e-125 - - - E - - - GDSL-like Lipase/Acylhydrolase
PBHJGNOG_02278 6.92e-106 nodN - - I - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_02279 2.11e-148 - - - U ko:K05595 - ko00000,ko02000 MarC family integral membrane protein
PBHJGNOG_02280 1.5e-124 - - - S - - - COG NOG35345 non supervised orthologous group
PBHJGNOG_02281 0.0 gloA 4.4.1.5 - E ko:K01759,ko:K03827 ko00620,map00620 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PBHJGNOG_02282 3.1e-214 per1 3.5.2.6 - V ko:K17836 ko00311,ko01130,ko01501,map00311,map01130,map01501 ko00000,ko00001,ko00002,ko01000,ko01504 COG2367 Beta-lactamase class A
PBHJGNOG_02283 2.28e-290 - - - S - - - SEC-C motif
PBHJGNOG_02284 7.95e-59 - - - K - - - Psort location Cytoplasmic, score
PBHJGNOG_02285 1.85e-208 - - - S - - - HEPN domain
PBHJGNOG_02286 7.01e-213 - - - S - - - HEPN domain
PBHJGNOG_02287 0.0 - - - S - - - P-loop ATPase and inactivated derivatives
PBHJGNOG_02288 3.25e-106 - - - S - - - COG NOG19145 non supervised orthologous group
PBHJGNOG_02289 1.29e-262 yjmD_2 - - E ko:K18369 ko00640,map00640 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PBHJGNOG_02290 5.24e-188 spoU - - H ko:K03437 - ko00000,ko03016 RNA methyltransferase TrmH family
PBHJGNOG_02291 4.49e-192 - - - - - - - -
PBHJGNOG_02292 0.0 - - - L ko:K09384 - ko00000 Uncharacterized conserved protein (DUF2075)
PBHJGNOG_02293 8.04e-70 - - - S - - - dUTPase
PBHJGNOG_02294 0.0 - - - L - - - helicase
PBHJGNOG_02295 3.12e-91 - 3.6.1.55 - F ko:K03574 - ko00000,ko01000,ko03400 NUDIX domain
PBHJGNOG_02296 0.0 mnmE - - S ko:K03650 - ko00000,ko01000,ko03016 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PBHJGNOG_02297 4.43e-32 - - - T - - - Histidine kinase
PBHJGNOG_02298 1.29e-36 - - - T - - - Histidine kinase
PBHJGNOG_02299 8.07e-155 - - - S ko:K07118 - ko00000 NmrA-like family
PBHJGNOG_02300 1.46e-52 - - - L ko:K09384 - ko00000 Uncharacterized conserved protein (DUF2075)
PBHJGNOG_02301 2.9e-299 - - - L ko:K09384 - ko00000 Uncharacterized conserved protein (DUF2075)
PBHJGNOG_02302 8.57e-216 udp 2.4.2.3 - F ko:K00757 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PBHJGNOG_02303 2.19e-209 - - - S - - - UPF0365 protein
PBHJGNOG_02304 5.32e-86 - - - O - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_02305 0.0 - - - S - - - COG NOG11656 non supervised orthologous group
PBHJGNOG_02306 1.5e-178 ttcA - - H ko:K14058 - ko00000,ko03016 Belongs to the TtcA family
PBHJGNOG_02307 7.29e-84 - - - S ko:K09922 - ko00000 Psort location CytoplasmicMembrane, score
PBHJGNOG_02308 4.24e-246 apbE 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PBHJGNOG_02309 1.31e-129 mntP - - P - - - Probably functions as a manganese efflux pump
PBHJGNOG_02310 7.51e-167 - - - S - - - COG NOG28307 non supervised orthologous group
PBHJGNOG_02311 3.29e-232 arnC - - M - - - involved in cell wall biogenesis
PBHJGNOG_02312 7.47e-125 - - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_02314 0.0 topB 5.99.1.2 - L ko:K03169 - ko00000,ko01000,ko03032 COG0550 Topoisomerase IA
PBHJGNOG_02315 3.61e-185 mutB 5.4.99.2 - I ko:K01847 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_02316 0.0 - - - S - - - Major fimbrial subunit protein type IV, Fimbrillin, C-terminal
PBHJGNOG_02317 2.42e-301 - - - M - - - COG NOG23378 non supervised orthologous group
PBHJGNOG_02319 8.61e-132 - - - M - - - Protein of unknown function (DUF3575)
PBHJGNOG_02320 5.32e-226 - - - U - - - Domain of unknown function, B. Theta Gene description (DUF3868)
PBHJGNOG_02321 1.01e-141 - - - M - - - Protein of unknown function (DUF3575)
PBHJGNOG_02322 1.48e-217 - - - L - - - Phage integrase, N-terminal SAM-like domain
PBHJGNOG_02323 2.6e-176 recO - - L ko:K03584 ko03440,map03440 ko00000,ko00001,ko03400 Involved in DNA repair and RecF pathway recombination
PBHJGNOG_02324 0.0 - - - H - - - COG NOG08812 non supervised orthologous group
PBHJGNOG_02325 8.11e-237 - - - - - - - -
PBHJGNOG_02326 1.74e-307 - - - NU - - - Lipid A 3-O-deacylase (PagL)
PBHJGNOG_02327 3.12e-95 - - - - - - - -
PBHJGNOG_02328 0.0 - - - S - - - MAC/Perforin domain
PBHJGNOG_02330 0.0 - - - S - - - MAC/Perforin domain
PBHJGNOG_02331 4.86e-261 - - - - - - - -
PBHJGNOG_02332 5.66e-70 - - - S - - - Domain of unknown function (DUF3244)
PBHJGNOG_02333 0.0 - - - S - - - Tetratricopeptide repeat
PBHJGNOG_02335 7.23e-92 - - - S ko:K09117 - ko00000 YqeY-like protein
PBHJGNOG_02336 1.18e-292 ftsZ - - D ko:K03531 ko04112,map04112 ko00000,ko00001,ko02048,ko03036,ko04812 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PBHJGNOG_02337 2.56e-309 ftsA - - D ko:K03590 ko04112,map04112 ko00000,ko00001,ko03036,ko04812 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PBHJGNOG_02338 6.51e-273 algI - - M - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02339 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PBHJGNOG_02340 4.57e-244 gpr - - C ko:K19265 - ko00000,ko01000 Oxidoreductase, aldo keto reductase family protein
PBHJGNOG_02342 3.25e-112 - - - - - - - -
PBHJGNOG_02343 1.58e-152 - - - S - - - Outer membrane protein beta-barrel domain
PBHJGNOG_02344 1.56e-172 - - - - - - - -
PBHJGNOG_02345 1.55e-145 fnlA 5.1.3.2 - M ko:K17716 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Polysaccharide biosynthesis protein
PBHJGNOG_02347 6.94e-70 - - - S - - - Psort location Extracellular, score
PBHJGNOG_02348 0.0 - - - G - - - Glycosyl hydrolase family 2, sugar binding domain protein
PBHJGNOG_02349 0.0 - 3.1.1.53 - G ko:K05970 - ko00000,ko01000 COG NOG04984 non supervised orthologous group
PBHJGNOG_02350 0.0 - - - G - - - hydrolase, family 65, central catalytic
PBHJGNOG_02351 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PBHJGNOG_02354 4.38e-93 - - - S - - - COG NOG32529 non supervised orthologous group
PBHJGNOG_02355 8.18e-115 - - - S - - - Domain of unknown function (DUF4251)
PBHJGNOG_02356 0.0 mutS - - L ko:K03555 ko03430,map03430 ko00000,ko00001,ko03400 that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PBHJGNOG_02357 0.0 - - - S - - - MAC/Perforin domain
PBHJGNOG_02358 1.92e-155 - 2.3.1.28 - V ko:K19271 - br01600,ko00000,ko01000,ko01504 COG4845 Chloramphenicol O-acetyltransferase
PBHJGNOG_02359 8.22e-213 lgt - - M - - - Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PBHJGNOG_02360 2.42e-207 panE 1.1.1.169 - H ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PBHJGNOG_02361 1.34e-259 ychF - - J ko:K06942 - ko00000,ko03009 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PBHJGNOG_02362 5.52e-163 - - - - - - - -
PBHJGNOG_02363 1e-55 - - - K - - - Helix-turn-helix domain
PBHJGNOG_02364 4.09e-249 - - - T - - - AAA domain
PBHJGNOG_02365 3.31e-238 - - - L - - - DNA primase
PBHJGNOG_02366 4.41e-228 - - - L - - - plasmid recombination enzyme
PBHJGNOG_02367 1.92e-74 - - - - - - - -
PBHJGNOG_02368 2.72e-76 - - - S - - - Protein of unknown function, DUF488
PBHJGNOG_02369 1.03e-87 - - - S - - - Protein of unknown function, DUF488
PBHJGNOG_02370 2.72e-185 - - - L - - - Arm DNA-binding domain
PBHJGNOG_02371 2.65e-268 araJ - - EGP ko:K08156 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02372 0.0 - - - O ko:K06889 - ko00000 COG COG1073 Hydrolases of the alpha beta superfamily
PBHJGNOG_02373 0.0 - - - - - - - -
PBHJGNOG_02374 1.67e-249 - - - - - - - -
PBHJGNOG_02375 0.0 - - - S ko:K21557 - ko00000,ko03000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_02376 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_02377 0.0 yngK - - S - - - lipoprotein YddW precursor K01189
PBHJGNOG_02378 6.63e-63 rpsJ - - J ko:K02946 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Involved in the binding of tRNA to the ribosomes
PBHJGNOG_02379 0.0 fusA - - J ko:K02355 - ko00000,ko03012,ko03029 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PBHJGNOG_02380 1.89e-105 rpsG - - J ko:K02992 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PBHJGNOG_02381 4.76e-87 rpsL - - J ko:K02950 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PBHJGNOG_02382 6.63e-63 - - - T - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_02383 0.0 rpoC 2.7.7.6 - K ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PBHJGNOG_02384 9.86e-201 panC 6.3.2.1 - H ko:K01918 ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
PBHJGNOG_02385 2.42e-199 glgA 2.4.1.21 GT5 G ko:K00703 ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026 ko00000,ko00001,ko00002,ko01000,ko01003 Starch synthase, catalytic domain
PBHJGNOG_02386 0.0 - - - S - - - Domain of unknown function (DUF4270)
PBHJGNOG_02387 0.0 amyA 3.2.1.1 GH57 G ko:K07405 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 57 family
PBHJGNOG_02388 1.84e-299 gmhA 2.4.1.346 GT4 M ko:K13668 - ko00000,ko01000,ko01003 Glycosyltransferase, group 1 family protein
PBHJGNOG_02389 7.39e-225 - 2.7.1.4 - G ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 ko00000,ko00001,ko01000 COG COG0524 Sugar kinases, ribokinase family
PBHJGNOG_02390 9.89e-138 kdsD 5.3.1.13 - M ko:K06041 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 sugar phosphate isomerase involved in capsule formation
PBHJGNOG_02391 6.99e-109 - 3.2.2.10 - S ko:K06966 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the LOG family
PBHJGNOG_02392 5.19e-39 mnmC - - S - - - Psort location Cytoplasmic, score
PBHJGNOG_02393 7.09e-223 mntA - - P ko:K09815,ko:K11707 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 COG0803 ABC-type metal ion transport system, periplasmic component surface adhesin
PBHJGNOG_02394 9.95e-187 znuC - - P ko:K09817 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
PBHJGNOG_02395 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02396 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_02397 0.0 cvrA - - P ko:K11105 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02398 3e-272 pyrP - - F ko:K02824 - ko00000,ko02000 Permease family
PBHJGNOG_02399 0.0 hcp 1.7.99.1 - C ko:K05601 ko00910,map00910 ko00000,ko00001,ko01000 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O
PBHJGNOG_02400 5.64e-152 - - - K - - - Crp-like helix-turn-helix domain
PBHJGNOG_02401 4.18e-315 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBHJGNOG_02402 9.3e-317 zraR_2 - - T - - - COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains
PBHJGNOG_02403 5.58e-179 - - - S - - - COG NOG27188 non supervised orthologous group
PBHJGNOG_02404 5.31e-202 - - - S - - - Ser Thr phosphatase family protein
PBHJGNOG_02405 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02406 3.84e-154 - - - V ko:K02003 - ko00000,ko00002,ko02000 bacteriocin export ABC transporter, lactococcin 972 group
PBHJGNOG_02407 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02408 0.0 - - - V - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02409 1.99e-153 pgmB - - S - - - HAD hydrolase, family IA, variant 3
PBHJGNOG_02410 2.4e-192 panB 2.1.2.11 - H ko:K00606 ko00770,ko01100,ko01110,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate
PBHJGNOG_02411 1.34e-259 - - - EGP - - - Transporter, major facilitator family protein
PBHJGNOG_02412 0.0 relA 2.7.6.5, 3.1.7.2 - KT ko:K00951,ko:K01139 ko00230,map00230 ko00000,ko00001,ko01000,ko03009 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PBHJGNOG_02413 0.0 - - - G - - - Carbohydrate binding domain protein
PBHJGNOG_02414 0.0 - - - G - - - Glycosyl hydrolases family 43
PBHJGNOG_02415 8.5e-243 - - - G - - - Belongs to the glycosyl hydrolase 43 family
PBHJGNOG_02416 0.0 - 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 35 family
PBHJGNOG_02417 1.27e-129 - - - - - - - -
PBHJGNOG_02418 1.3e-195 - - - S - - - Protein of unknown function (DUF1266)
PBHJGNOG_02419 1.88e-214 - - - S - - - Protein of unknown function (DUF3137)
PBHJGNOG_02420 1.6e-122 - - - S ko:K03744 - ko00000 LemA family
PBHJGNOG_02421 6.34e-315 tldD3 - - S ko:K03592 - ko00000,ko01002 Psort location Cytoplasmic, score 9.26
PBHJGNOG_02422 0.0 tldD1 - - S ko:K03568 - ko00000,ko01002 and their inactivated homologs
PBHJGNOG_02423 5.55e-168 dacA - - S - - - Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PBHJGNOG_02424 1.58e-204 folP 2.5.1.15 - H ko:K00796 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_02425 0.0 - - - T - - - histidine kinase DNA gyrase B
PBHJGNOG_02426 0.0 murF 6.3.2.10 - M ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PBHJGNOG_02427 1.09e-95 fjo27 - - S - - - Psort location CytoplasmicMembrane, score 9.46
PBHJGNOG_02428 0.0 - - - P ko:K03308 - ko00000 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
PBHJGNOG_02429 2.64e-214 comEA - - L - - - COG COG1555 DNA uptake protein and related DNA-binding proteins
PBHJGNOG_02430 2.4e-151 lolD - - V ko:K09810 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner
PBHJGNOG_02431 2.69e-167 hypB - - H ko:K22132 - ko00000,ko03016 involved in molybdopterin and thiamine biosynthesis family 1
PBHJGNOG_02432 0.0 - - - PT - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02433 2.04e-229 - - - PT - - - Domain of unknown function (DUF4974)
PBHJGNOG_02434 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_02435 0.0 - - - GM ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_02437 0.0 - - - G - - - Domain of unknown function (DUF4091)
PBHJGNOG_02438 0.0 - - - G - - - Glycosyl hydrolase family 20, catalytic domain
PBHJGNOG_02439 1.28e-17 - - - - - - - -
PBHJGNOG_02440 3.12e-51 - - - - - - - -
PBHJGNOG_02441 1.39e-61 - - - S - - - Toxin-antitoxin system, toxin component, RelE family
PBHJGNOG_02442 3.03e-52 - - - K - - - Helix-turn-helix
PBHJGNOG_02443 5.91e-06 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_02444 1.33e-73 - - - S - - - Phage derived protein Gp49-like (DUF891)
PBHJGNOG_02445 1.9e-62 - - - K - - - Helix-turn-helix
PBHJGNOG_02446 0.0 - - - S - - - Virulence-associated protein E
PBHJGNOG_02447 5.12e-42 - - - S - - - Domain of unknown function (DUF4248)
PBHJGNOG_02448 7.91e-91 - - - L - - - DNA-binding protein
PBHJGNOG_02449 1.5e-25 - - - - - - - -
PBHJGNOG_02450 4.55e-113 - 3.5.1.28 - V ko:K01447 - ko00000,ko01000 N-acetylmuramoyl-L-alanine amidase
PBHJGNOG_02451 2.55e-129 pflA 1.97.1.4 - C ko:K04069 - ko00000,ko01000 Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PBHJGNOG_02452 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBHJGNOG_02453 0.0 yngK - - S - - - lipoprotein YddW precursor
PBHJGNOG_02454 1.68e-122 - - - P ko:K07240 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02455 1.13e-126 chrA - - P ko:K07240 - ko00000,ko02000 Psort location CytoplasmicMembrane, score
PBHJGNOG_02456 0.0 - - - T - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_02457 0.0 purL 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate
PBHJGNOG_02460 1.8e-98 - - - M - - - TupA-like ATPgrasp
PBHJGNOG_02461 6.06e-152 - - - M ko:K07282 - ko00000 Bacterial capsule synthesis protein
PBHJGNOG_02463 7.5e-08 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 O-acyltransferase activity
PBHJGNOG_02465 2.55e-54 - - - M - - - Glycosyl transferases group 1
PBHJGNOG_02466 1.89e-15 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02467 8.31e-52 - - - M - - - Pfam Glycosyl transferase family 2
PBHJGNOG_02468 1.05e-20 - - - I - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02471 6.36e-19 - - - M - - - TupA-like ATPgrasp
PBHJGNOG_02472 7.69e-100 - - - M - - - -O-antigen
PBHJGNOG_02473 2.85e-93 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02474 4.77e-107 - - - M - - - Glycosyl transferases group 1
PBHJGNOG_02475 1.51e-231 fnlA 5.1.3.2 - M ko:K17716 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Polysaccharide biosynthesis protein
PBHJGNOG_02476 2.87e-271 - 1.1.1.367 - GM ko:K19068 - ko00000,ko01000 NAD dependent epimerase dehydratase family
PBHJGNOG_02477 1.97e-259 - 5.1.3.14 - G ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 ko00000,ko00001,ko00002,ko01000,ko01005 UDP-N-acetylglucosamine 2-epimerase
PBHJGNOG_02478 1.21e-244 - - - M - - - NAD dependent epimerase dehydratase family
PBHJGNOG_02479 3.13e-310 ugd 1.1.1.22 - C ko:K00012 ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PBHJGNOG_02480 5.42e-09 - - - L - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_02481 4.04e-63 - - - - - - - -
PBHJGNOG_02482 0.0 wbpM - - GM - - - Polysaccharide biosynthesis protein
PBHJGNOG_02483 0.0 aslA - - P - - - COG COG3119 Arylsulfatase A and related enzymes
PBHJGNOG_02484 5.72e-156 - - - S - - - P-loop ATPase and inactivated derivatives
PBHJGNOG_02485 4.25e-84 - - - S - - - Major fimbrial subunit protein type IV, Fimbrillin, C-terminal
PBHJGNOG_02486 3.69e-213 - - - S - - - COG NOG32009 non supervised orthologous group
PBHJGNOG_02487 4.11e-105 - - - - - - - -
PBHJGNOG_02488 3.86e-207 - - - S - - - Domain of unknown function (DUF4906)
PBHJGNOG_02491 3.64e-196 - - - DK - - - Fic/DOC family
PBHJGNOG_02492 2.25e-105 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PBHJGNOG_02493 7.76e-238 yqiK - - S ko:K07192 ko04910,map04910 ko00000,ko00001,ko03036,ko04131,ko04147 SPFH Band 7 PHB domain protein
PBHJGNOG_02494 1.76e-161 - - - S - - - COG NOG26960 non supervised orthologous group
PBHJGNOG_02495 3.02e-230 phoH - - T ko:K06217 - ko00000 phosphate starvation-inducible protein
PBHJGNOG_02496 7.73e-230 purC 6.3.2.6 - F ko:K01923 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the SAICAR synthetase family
PBHJGNOG_02497 4.16e-179 menG 2.1.1.163, 2.1.1.201 - H ko:K03183 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PBHJGNOG_02498 1.15e-182 aroE 1.1.1.25 - C ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 COG0169 Shikimate 5-dehydrogenase
PBHJGNOG_02499 2.4e-232 - - - S ko:K06889 - ko00000 of the alpha beta superfamily
PBHJGNOG_02500 3.4e-198 - - - S ko:K06872 - ko00000 COG1512 Beta-propeller domains of methanol dehydrogenase type
PBHJGNOG_02501 1.53e-128 lemA - - S ko:K03744 - ko00000 LemA family
PBHJGNOG_02503 3.59e-286 purM 6.3.3.1 - F ko:K01933 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PBHJGNOG_02504 1.07e-262 prfA - - J ko:K02835 - ko00000,ko03012 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PBHJGNOG_02505 1.99e-196 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the OMP decarboxylase family. Type 2 subfamily
PBHJGNOG_02506 9.77e-297 - - - S ko:K06885 - ko00000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_02507 9.53e-164 lpxD 2.3.1.191 - M ko:K02536 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PBHJGNOG_02508 0.0 fabZ 3.5.1.108, 4.2.1.59 - IM ko:K16363 ko00061,ko00540,ko01100,ko01212,map00061,map00540,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004,ko01005 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis
PBHJGNOG_02509 8.73e-161 lpxA 2.3.1.129 - M ko:K00677 ko00540,ko01100,ko01503,map00540,map01100,map01503 ko00000,ko00001,ko00002,ko01000,ko01005 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PBHJGNOG_02510 1.95e-122 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_02511 1.67e-221 miaA 2.5.1.75 - F ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 ko00000,ko00001,ko01000,ko01006,ko03016 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PBHJGNOG_02512 6.01e-99 - - - - - - - -
PBHJGNOG_02513 0.0 - - - KT - - - COG NOG25147 non supervised orthologous group
PBHJGNOG_02514 0.0 - - - KT - - - COG NOG25147 non supervised orthologous group
PBHJGNOG_02515 3.04e-146 - - - - ko:K03646 - ko00000,ko02000 -
PBHJGNOG_02516 8.58e-82 - - - K - - - Transcriptional regulator, BlaI MecI CopY family
PBHJGNOG_02517 1.33e-144 - - - P ko:K07085 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02518 6.68e-150 - - - F - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_02519 0.0 cobQ 6.3.5.10 - H ko:K02232 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
PBHJGNOG_02520 0.0 - - - H ko:K02014 - ko00000,ko02000 COG COG4206 Outer membrane cobalamin receptor protein
PBHJGNOG_02521 2.92e-257 - - - S - - - COG NOG25284 non supervised orthologous group
PBHJGNOG_02522 2.94e-134 - - - S - - - non supervised orthologous group
PBHJGNOG_02523 7.25e-37 - - - - - - - -
PBHJGNOG_02525 0.0 - - - H - - - COG NOG06391 non supervised orthologous group
PBHJGNOG_02526 7.56e-154 cat 2.3.1.28 - V ko:K19271 - br01600,ko00000,ko01000,ko01504 Chloramphenicol acetyltransferase
PBHJGNOG_02527 1.71e-305 - - - NU - - - Lipid A 3-O-deacylase (PagL)
PBHJGNOG_02528 4.69e-282 purT 2.1.2.2 - F ko:K08289 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PBHJGNOG_02529 1.89e-232 - - - M - - - Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
PBHJGNOG_02530 4.58e-07 - - - - - - - -
PBHJGNOG_02531 1.89e-279 - - - S - - - Domain of unknown function (DUF5109)
PBHJGNOG_02532 0.0 - - - O - - - FAD dependent oxidoreductase
PBHJGNOG_02533 2.46e-291 nagC 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PBHJGNOG_02535 1.22e-215 nucA_1 - - F ko:K01173 ko04210,map04210 ko00000,ko00001,ko03029 Psort location Extracellular, score
PBHJGNOG_02536 5.44e-257 mltG - - S ko:K07082 - ko00000 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PBHJGNOG_02537 4.17e-149 nlpD_2 - - M - - - COG COG0739 Membrane proteins related to metalloendopeptidases
PBHJGNOG_02538 4e-156 - - - S - - - B3 4 domain protein
PBHJGNOG_02539 4.07e-187 - - - S ko:K05810 - ko00000,ko01000 Belongs to the multicopper oxidase YfiH RL5 family
PBHJGNOG_02540 2.94e-210 obg - - S ko:K03979 - ko00000,ko01000,ko03009 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PBHJGNOG_02541 6.54e-75 poxB 1.2.5.1, 2.2.1.6 - C ko:K00156,ko:K01652 ko00290,ko00620,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the TPP enzyme family
PBHJGNOG_02542 1.13e-211 - - - S - - - Predicted membrane protein (DUF2157)
PBHJGNOG_02543 1.14e-208 - - - S - - - Domain of unknown function (DUF4401)
PBHJGNOG_02544 1.92e-114 - - - S - - - GDYXXLXY protein
PBHJGNOG_02545 0.0 groL - - O ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PBHJGNOG_02546 3.78e-57 groS - - O ko:K04078 - ko00000,ko03029,ko03110 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PBHJGNOG_02547 1.14e-255 - - - S - - - COG NOG25022 non supervised orthologous group
PBHJGNOG_02548 2.2e-147 - - - S - - - L,D-transpeptidase catalytic domain
PBHJGNOG_02549 0.0 - 3.6.1.13 - L ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_02550 3.89e-22 - - - - - - - -
PBHJGNOG_02551 0.0 - - - C - - - 4Fe-4S binding domain protein
PBHJGNOG_02552 7.11e-253 hydE 2.8.1.6 - C ko:K01012 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko00002,ko01000 Iron-only hydrogenase maturation rSAM protein HydE
PBHJGNOG_02553 1.4e-149 - - - G - - - Glycosyl hydrolase family 92
PBHJGNOG_02554 0.0 - - - G - - - Glycosyl hydrolase family 92
PBHJGNOG_02555 1.16e-290 - 3.2.1.197 - G ko:K21065 - ko00000,ko01000 beta-1,4-mannooligosaccharide phosphorylase
PBHJGNOG_02556 0.0 - - - G - - - Glycosyl hydrolases family 43
PBHJGNOG_02557 0.0 - - - E - - - GDSL-like Lipase/Acylhydrolase
PBHJGNOG_02558 0.0 trkH - - P ko:K03498 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02559 0.0 trkA - - C ko:K03499 - ko00000,ko02000 COG0569 K transport systems NAD-binding component
PBHJGNOG_02560 0.0 dxs 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PBHJGNOG_02561 7.02e-245 - - - E - - - GSCFA family
PBHJGNOG_02562 0.0 alr 5.1.1.1 - M ko:K01775 ko00473,ko01100,ko01502,map00473,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PBHJGNOG_02563 2.62e-27 tatA - - U ko:K03116 ko03060,ko03070,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
PBHJGNOG_02564 2.69e-189 tatC - - U ko:K03118 ko03060,ko03070,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PBHJGNOG_02565 0.0 - 3.6.4.12 - L ko:K10742 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 COG COG1112 Superfamily I DNA and RNA helicases and helicase subunits
PBHJGNOG_02566 0.0 exuT - - G ko:K08191 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02568 6.07e-223 kduI 5.3.1.17 - G ko:K01815 ko00040,map00040 ko00000,ko00001,ko01000 Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
PBHJGNOG_02569 0.0 yhgF - - K ko:K06959 - ko00000 Tex-like protein N-terminal domain
PBHJGNOG_02570 2.54e-211 - - - S ko:K07052 - ko00000 CAAX amino terminal protease family protein
PBHJGNOG_02571 3.25e-251 - - - S - - - COG NOG26673 non supervised orthologous group
PBHJGNOG_02573 0.0 - - - S - - - COG COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PBHJGNOG_02574 3.45e-125 grpE - - O ko:K03687 - ko00000,ko03029,ko03110 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PBHJGNOG_02575 3.62e-314 dbpA 3.6.4.13 - L ko:K05591 - ko00000,ko01000,ko03009 ATP-independent RNA helicase DbpA
PBHJGNOG_02576 0.0 - - - T - - - COG COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
PBHJGNOG_02577 7.73e-104 - - - K - - - COG NOG19093 non supervised orthologous group
PBHJGNOG_02579 6.69e-239 holA 2.7.7.7 - L ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 COG1466 DNA polymerase III, delta subunit
PBHJGNOG_02580 7.21e-191 amn 3.2.2.4 - F ko:K01241 ko00230,map00230 ko00000,ko00001,ko01000 COG COG0775 Nucleoside phosphorylase
PBHJGNOG_02581 1.65e-106 - - - V - - - COG NOG14438 non supervised orthologous group
PBHJGNOG_02582 0.0 bpeF - - V ko:K03296 - ko00000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PBHJGNOG_02583 8.7e-178 birA 6.3.4.15 - H ko:K03524 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko01000,ko03000 biotin acetyl-CoA-carboxylase ligase
PBHJGNOG_02584 0.0 - - - M - - - COG0793 Periplasmic protease
PBHJGNOG_02585 7.94e-150 - - - S - - - COG NOG28155 non supervised orthologous group
PBHJGNOG_02586 7.31e-305 dinF - - V ko:K03327 - ko00000,ko02000 MATE efflux family protein
PBHJGNOG_02587 4.28e-163 pyrH 2.7.4.22 - F ko:K09903 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphorylation of UMP to UDP
PBHJGNOG_02589 2.81e-258 - - - D - - - Tetratricopeptide repeat
PBHJGNOG_02591 0.0 - - - P - - - (belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
PBHJGNOG_02592 1.39e-68 - - - P - - - RyR domain
PBHJGNOG_02593 3.87e-169 - - - G - - - Major Facilitator
PBHJGNOG_02594 3.51e-178 - - - G - - - FGGY family of carbohydrate kinases, N-terminal domain
PBHJGNOG_02595 1.31e-232 - - - S - - - Protein of unknown function (DUF2961)
PBHJGNOG_02596 7.65e-183 tonB2 - - U ko:K03832 - ko00000,ko02000 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PBHJGNOG_02597 1.96e-145 exbD2 - - U - - - Biopolymer transport protein ExbD/TolR
PBHJGNOG_02598 1.99e-122 exbD1 - - U - - - Biopolymer transport protein ExbD/TolR
PBHJGNOG_02599 1.07e-190 btuC - - P ko:K02015 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PBHJGNOG_02600 5.44e-178 - 3.6.3.34 - HP ko:K02013 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components
PBHJGNOG_02601 1.63e-314 - - - V - - - COG0534 Na -driven multidrug efflux pump
PBHJGNOG_02602 4.44e-134 - - - T - - - Cyclic nucleotide-monophosphate binding domain
PBHJGNOG_02603 1.5e-176 yvoA - - K ko:K03710 - ko00000,ko03000 UbiC transcription regulator-associated domain protein
PBHJGNOG_02604 0.0 - - - G - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_02605 0.0 - - - G - - - Glycosyl hydrolase family 92
PBHJGNOG_02606 2.67e-271 - - - G - - - Transporter, major facilitator family protein
PBHJGNOG_02607 0.0 - - - H - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_02608 0.0 - - - P ko:K21572 - ko00000,ko02000 non supervised orthologous group
PBHJGNOG_02609 7.18e-303 - - - S - - - Domain of unknown function (DUF5126)
PBHJGNOG_02610 5.5e-303 - - - S - - - Domain of unknown function
PBHJGNOG_02611 2.44e-93 - - - L - - - Integrase core domain
PBHJGNOG_02612 0.0 - 3.2.1.20 GH31 M ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 COG NOG06228 non supervised orthologous group
PBHJGNOG_02613 0.0 bglX 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 glycosyl hydrolase, family 3
PBHJGNOG_02614 7.01e-244 - - - G - - - Glycosyl hydrolases family 43
PBHJGNOG_02615 0.0 - - - M ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_02616 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_02617 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBHJGNOG_02618 1.45e-124 - 3.5.1.124 - S ko:K05520 - ko00000,ko01000,ko01002 DJ-1 PfpI family protein
PBHJGNOG_02619 3.72e-80 - - - K - - - Transcriptional regulator, HxlR family
PBHJGNOG_02620 0.0 - - - E - - - Peptidase, S9A B C family, catalytic domain protein
PBHJGNOG_02621 6.22e-242 cbh 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PBHJGNOG_02622 6.77e-105 yvbK 2.3.1.82 - K ko:K03827,ko:K18815 - br01600,ko00000,ko01000,ko01504 Psort location Cytoplasmic, score 8.96
PBHJGNOG_02623 2.2e-151 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family
PBHJGNOG_02624 9.8e-113 - - - S - - - DinB superfamily
PBHJGNOG_02625 5.68e-110 - - - E - - - Appr-1-p processing protein
PBHJGNOG_02626 1.32e-62 - - - S - - - Protein of unknown function (DUF2089)
PBHJGNOG_02627 3.35e-137 - - - - - - - -
PBHJGNOG_02628 7.42e-311 creD - - V ko:K06143 - ko00000 COG COG4452 Inner membrane protein involved in colicin E2 resistance
PBHJGNOG_02629 7.57e-63 - - - K - - - Winged helix DNA-binding domain
PBHJGNOG_02630 3.31e-120 - - - Q - - - membrane
PBHJGNOG_02631 5.57e-247 pheS 6.1.1.20 - J ko:K01889 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PBHJGNOG_02632 1.95e-248 - - - M - - - Gram-negative bacterial TonB protein C-terminal
PBHJGNOG_02633 5.79e-43 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_02634 2.98e-27 - 3.2.1.3 GH15 G ko:K01178 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Domain of unknown function (DUF5127)
PBHJGNOG_02635 0.0 - - - E - - - non supervised orthologous group
PBHJGNOG_02636 2.14e-105 - - - S - - - protein BT4048 SWALL AAO79153 (EMBL AE016943) (373 aa) fasta scores E()
PBHJGNOG_02638 2.03e-42 - - - C - - - radical SAM
PBHJGNOG_02639 7.62e-122 - - - S - - - TolB-like 6-blade propeller-like
PBHJGNOG_02640 4.84e-15 - - - S - - - NVEALA protein
PBHJGNOG_02641 1.72e-196 - - - S - - - TolB-like 6-blade propeller-like
PBHJGNOG_02643 7.72e-20 - - - - - - - -
PBHJGNOG_02644 6.31e-273 - - - S - - - ATPase (AAA superfamily)
PBHJGNOG_02645 2.86e-122 - - - M - - - Psort location CytoplasmicMembrane, score 9.46
PBHJGNOG_02646 0.0 pcrA 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
PBHJGNOG_02647 1.28e-305 - - - P ko:K03305 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02648 1.69e-120 hpt 2.4.2.8 - F ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the purine pyrimidine phosphoribosyltransferase family
PBHJGNOG_02649 2.46e-132 adk 2.7.4.3 - F ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PBHJGNOG_02650 1.14e-99 fabH 2.3.1.180 - I ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PBHJGNOG_02651 1.11e-207 era - - S ko:K03595 - ko00000,ko03009,ko03029 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PBHJGNOG_02652 6.37e-314 der - - S ko:K03977 - ko00000,ko03009 GTPase that plays an essential role in the late steps of ribosome biogenesis
PBHJGNOG_02653 6.08e-177 lptB - - S ko:K06861 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Psort location Cytoplasmic, score 9.12
PBHJGNOG_02654 2.98e-164 mlaE - - Q ko:K02066 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02655 4.63e-115 moeZ 2.7.7.80, 2.8.1.11 - H ko:K21029,ko:K21147 ko04122,map04122 ko00000,ko00001,ko01000 involved in molybdopterin and thiamine biosynthesis family 2
PBHJGNOG_02656 1.26e-145 thiE 2.5.1.3 - H ko:K00788 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Thiamine monophosphate synthase TENI
PBHJGNOG_02657 3.93e-134 - - - M - - - COG NOG19089 non supervised orthologous group
PBHJGNOG_02658 5.73e-120 - - - M - - - Outer membrane protein beta-barrel domain
PBHJGNOG_02659 2.06e-236 - - - T - - - Histidine kinase
PBHJGNOG_02660 4.15e-186 - - - K ko:K02477 - ko00000,ko02022 LytTr DNA-binding domain protein
PBHJGNOG_02662 0.0 alaC - - E - - - Aminotransferase, class I II
PBHJGNOG_02663 1.2e-156 araD 5.1.3.4 - G ko:K03077 ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120 ko00000,ko00001,ko00002,ko01000 COG COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
PBHJGNOG_02664 4.5e-49 - - - S - - - 23S rRNA-intervening sequence protein
PBHJGNOG_02665 0.0 araA 5.3.1.4 - G ko:K01804 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of L-arabinose to L-ribulose
PBHJGNOG_02666 0.0 araB - - G - - - Carbohydrate kinase, FGGY family protein
PBHJGNOG_02668 5.23e-173 - - - L - - - ISXO2-like transposase domain
PBHJGNOG_02671 1.82e-227 nadA 2.5.1.72 - H ko:K03517 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
PBHJGNOG_02673 1.2e-123 spoU - - J - - - RNA methylase, SpoU family K00599
PBHJGNOG_02674 2.98e-129 - - - S - - - COG NOG14459 non supervised orthologous group
PBHJGNOG_02675 0.0 - - - L - - - Psort location OuterMembrane, score
PBHJGNOG_02676 3.86e-190 - - - C - - - radical SAM domain protein
PBHJGNOG_02678 0.0 - 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 31 family
PBHJGNOG_02679 4.09e-144 - - - S ko:K14623 - ko00000,ko03400 DNA-damage-inducible protein D
PBHJGNOG_02680 8.2e-58 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_02681 0.0 - 3.1.1.53 - S ko:K05970 - ko00000,ko01000 Carbohydrate esterase, sialic acid-specific acetylesterase
PBHJGNOG_02682 1.42e-270 - - - S - - - COGs COG4299 conserved
PBHJGNOG_02683 0.0 sulP - - P ko:K03321 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02684 3.5e-138 rbr - - C - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_02685 7.68e-48 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor, ECF subfamily
PBHJGNOG_02686 3.8e-81 - - - PT - - - Domain of unknown function (DUF4974)
PBHJGNOG_02687 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_02688 6.56e-317 - - - P ko:K21572 - ko00000,ko02000 non supervised orthologous group
PBHJGNOG_02689 1.74e-118 - - - S - - - Domain of unknown function (DUF4959)
PBHJGNOG_02690 6.48e-284 - 3.1.6.1 - P ko:K01130 ko00140,ko00600,map00140,map00600 ko00000,ko00001,ko01000 Arylsulfatase
PBHJGNOG_02691 0.0 - - - G - - - Glycosyl hydrolase family 20, catalytic domain
PBHJGNOG_02692 4.43e-56 - - - S - - - Domain of unknown function (DUF4884)
PBHJGNOG_02693 0.0 nadB 1.4.3.16 - H ko:K00278 ko00250,ko00760,ko01100,map00250,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of L-aspartate to iminoaspartate
PBHJGNOG_02694 2.11e-80 - - - S - - - COG NOG29403 non supervised orthologous group
PBHJGNOG_02695 3.42e-314 lpdA 1.8.1.4 - C ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3)
PBHJGNOG_02696 0.0 dacB 3.4.16.4 - M ko:K07259 ko00550,map00550 ko00000,ko00001,ko01000,ko01002,ko01011 COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)
PBHJGNOG_02697 5.1e-284 - - - S - - - PFAM Formylglycine-generating sulfatase enzyme
PBHJGNOG_02698 1.23e-312 - - - S - - - PFAM Formylglycine-generating sulfatase enzyme
PBHJGNOG_02699 6.22e-136 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PBHJGNOG_02700 2.19e-135 - - - - - - - -
PBHJGNOG_02701 0.0 scpC 2.8.3.18, 3.1.2.1 - C ko:K01067,ko:K18118 ko00020,ko00620,ko00650,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00650,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 COG0427 Acetyl-CoA hydrolase
PBHJGNOG_02702 0.0 lon 3.4.21.53 - O ko:K01338 ko04112,map04112 ko00000,ko00001,ko01000,ko01002 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
PBHJGNOG_02703 3.83e-173 smtA 2.1.1.223 - J ko:K15460 - ko00000,ko01000,ko03016 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
PBHJGNOG_02704 4.02e-109 pyrI - - F ko:K00610 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002 Involved in allosteric regulation of aspartate carbamoyltransferase
PBHJGNOG_02705 2.37e-141 - - - S - - - COG COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
PBHJGNOG_02706 1.19e-178 - - - S - - - COG NOG27381 non supervised orthologous group
PBHJGNOG_02707 2.12e-311 glyA 2.1.2.1 - E ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PBHJGNOG_02708 0.0 fhs 6.3.4.3 - F ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Formyltetrahydrofolate synthetase
PBHJGNOG_02709 2.51e-283 dcuB - - S ko:K07791,ko:K07792 ko02020,map02020 ko00000,ko00001,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02710 5.99e-244 ansB 3.5.1.1 - EJ ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the asparaginase 1 family
PBHJGNOG_02711 6.53e-294 - - - M - - - Phosphate-selective porin O and P
PBHJGNOG_02712 9.33e-48 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_02713 1.05e-132 yvqK 2.5.1.17 - S ko:K00798 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 Conserved protein
PBHJGNOG_02714 5.5e-154 - - - S - - - COG NOG23394 non supervised orthologous group
PBHJGNOG_02715 2.21e-156 - - - M ko:K03832 - ko00000,ko02000 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PBHJGNOG_02722 1.23e-227 - - - - - - - -
PBHJGNOG_02723 0.0 - 2.7.11.1 - KLMT ko:K12132 - ko00000,ko01000,ko01001 Protein tyrosine kinase
PBHJGNOG_02724 2.61e-127 - - - T - - - ATPase activity
PBHJGNOG_02725 0.0 - 2.7.11.1 - KLT ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 Protein tyrosine kinase
PBHJGNOG_02726 0.0 - 3.1.3.16 - T ko:K20074 - ko00000,ko01000,ko01009 Serine/threonine phosphatases, family 2C, catalytic domain
PBHJGNOG_02727 4.6e-138 - - - T - - - Inner membrane component of T3SS, cytoplasmic domain
PBHJGNOG_02728 0.0 - - - OT - - - Forkhead associated domain
PBHJGNOG_02730 0.0 - - - S - - - Domain of unknonw function from B. Theta Gene description (DUF3874)
PBHJGNOG_02731 4.05e-251 - - - S - - - UPF0283 membrane protein
PBHJGNOG_02732 0.0 - - - S - - - Dynamin family
PBHJGNOG_02733 0.0 - - - K ko:K03088 - ko00000,ko03021 Outer membrane protein beta-barrel domain
PBHJGNOG_02734 8.08e-188 - - - H - - - Methyltransferase domain
PBHJGNOG_02735 2.17e-286 - - - S ko:K07148 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02736 4.41e-18 - - - - - - - -
PBHJGNOG_02737 0.0 bepE_1 - - V ko:K03296 - ko00000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PBHJGNOG_02738 6.05e-307 oprM_1 - - MU - - - Efflux transporter, outer membrane factor lipoprotein, NodT family
PBHJGNOG_02739 9.23e-269 epsC 5.1.3.14 - G ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 ko00000,ko00001,ko00002,ko01000,ko01005 UDP-N-acetylglucosamine 2-epimerase
PBHJGNOG_02740 4.08e-236 - 1.1.1.336 - M ko:K02472 ko00520,ko05111,map00520,map05111 ko00000,ko00001,ko01000 Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PBHJGNOG_02742 5.01e-150 - - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_02743 1.85e-127 marC - - U ko:K05595 - ko00000,ko02000 UPF0056 membrane protein
PBHJGNOG_02744 2.71e-158 - - - K - - - - catabolite gene activator and regulatory subunit of cAMP-dependent protein
PBHJGNOG_02746 0.0 - - - S - - - NHL repeat
PBHJGNOG_02747 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_02748 0.0 - - - P - - - SusD family
PBHJGNOG_02749 1.35e-244 - - - S - - - Domain of unknown function (DUF4361)
PBHJGNOG_02750 0.0 - - - S - - - Fibronectin type 3 domain
PBHJGNOG_02751 1.6e-154 - - - - - - - -
PBHJGNOG_02752 0.0 - - - S - - - P-loop ATPase and inactivated derivatives
PBHJGNOG_02753 9.83e-266 - - - P - - - TonB dependent receptor
PBHJGNOG_02754 3.1e-311 - - - S - - - amine dehydrogenase activity
PBHJGNOG_02755 3.65e-133 - - - O - - - Phospholipid methyltransferase
PBHJGNOG_02756 7.75e-161 - - - C - - - Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PBHJGNOG_02757 0.0 - - - G - - - Glycosyl hydrolase family 2, sugar binding domain protein
PBHJGNOG_02758 4.61e-58 - - - - - - - -
PBHJGNOG_02759 2.78e-86 - - - S - - - COG NOG14445 non supervised orthologous group
PBHJGNOG_02762 2.03e-204 - - - L - - - Phage integrase SAM-like domain
PBHJGNOG_02763 7.42e-105 - - - V - - - N-acetylmuramoyl-L-alanine amidase
PBHJGNOG_02768 1.01e-07 - - - S - - - Protein of unknown function (DUF551)
PBHJGNOG_02770 1.8e-45 - - - - - - - -
PBHJGNOG_02771 0.0 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 alpha-galactosidase
PBHJGNOG_02772 0.0 - - - G - - - Glycosyl hydrolases family 43
PBHJGNOG_02774 0.0 - 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 glycosyl hydrolase, family 3
PBHJGNOG_02775 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PBHJGNOG_02777 1.58e-304 - - - S - - - Domain of unknown function
PBHJGNOG_02778 4.16e-303 - - - S - - - Domain of unknown function (DUF5126)
PBHJGNOG_02779 0.0 - - - P ko:K21572 - ko00000,ko02000 non supervised orthologous group
PBHJGNOG_02780 0.0 - - - H - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_02781 3.46e-155 - - - M - - - COG NOG27406 non supervised orthologous group
PBHJGNOG_02782 0.0 nagA - - G - - - b-glycosidase, glycoside hydrolase family 3 protein
PBHJGNOG_02783 1.13e-217 - 3.1.3.5, 3.6.1.45 - F ko:K01081,ko:K11751 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 Ser Thr phosphatase family protein
PBHJGNOG_02784 5.97e-188 ushA 3.1.3.5 - F ko:K01081 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 5'-nucleotidase, C-terminal domain
PBHJGNOG_02785 3.46e-265 - - - M - - - COG2885 Outer membrane protein and related peptidoglycan-associated
PBHJGNOG_02786 0.0 - - - N - - - bacterial-type flagellum assembly
PBHJGNOG_02787 1.21e-208 - - - L - - - Belongs to the 'phage' integrase family
PBHJGNOG_02788 3.88e-263 - - - M - - - COG2885 Outer membrane protein and related peptidoglycan-associated
PBHJGNOG_02789 0.0 - - - S - - - Domain of unknown function
PBHJGNOG_02790 5.41e-226 - - - L - - - Belongs to the 'phage' integrase family
PBHJGNOG_02791 4e-76 rplS - - J ko:K02884 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PBHJGNOG_02792 9.98e-134 - - - - - - - -
PBHJGNOG_02793 2.05e-109 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PBHJGNOG_02794 2.05e-231 glk 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 9.26
PBHJGNOG_02795 1.89e-167 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PBHJGNOG_02796 7.26e-304 - - - V ko:K02004 - ko00000,ko00002,ko02000 Efflux ABC transporter, permease protein
PBHJGNOG_02797 0.0 - - - L - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_02798 3.84e-98 - - - J - - - Threonine alanine tRNA ligase second additional domain protein
PBHJGNOG_02799 2.2e-85 hsp20 - - O ko:K13993 ko04141,map04141 ko00000,ko00001,ko03110 Belongs to the small heat shock protein (HSP20) family
PBHJGNOG_02800 6.85e-255 - - - V ko:K01992 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02801 1.18e-237 ybhS - - V ko:K01992 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02802 0.0 - - - G ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PBHJGNOG_02803 2.5e-205 - - - M ko:K01993 - ko00000 COG COG0845 Membrane-fusion protein
PBHJGNOG_02804 3.27e-287 - - - MU - - - COG NOG26656 non supervised orthologous group
PBHJGNOG_02805 1.12e-209 - - - K - - - transcriptional regulator (AraC family)
PBHJGNOG_02806 5.27e-262 manC 2.7.7.13 - M ko:K00971 ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110 ko00000,ko00001,ko00002,ko01000 mannose-1-phosphate guanylyltransferase
PBHJGNOG_02807 3.68e-105 carB 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ)
PBHJGNOG_02808 0.0 thiC 4.1.99.17 - H ko:K03147 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PBHJGNOG_02809 1.43e-176 thiG 2.8.1.10 - H ko:K03149 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
PBHJGNOG_02810 5.67e-141 thiE 2.5.1.3 - H ko:K00788 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PBHJGNOG_02811 2.87e-39 thiS - - H ko:K03154 ko04122,map04122 ko00000,ko00001 thiamine biosynthesis protein ThiS
PBHJGNOG_02812 0.0 - - - T - - - histidine kinase DNA gyrase B
PBHJGNOG_02813 8.49e-150 sodB 1.15.1.1 - C ko:K04564 ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016 ko00000,ko00001,ko01000 Destroys radicals which are normally produced within the cells and which are toxic to biological systems
PBHJGNOG_02814 0.0 - - - M - - - COG3209 Rhs family protein
PBHJGNOG_02815 1.42e-250 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02816 2.2e-120 tdk 2.7.1.21 - F ko:K00857 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 thymidine kinase
PBHJGNOG_02817 5.51e-101 - - - S - - - COG NOG23390 non supervised orthologous group
PBHJGNOG_02818 1.5e-157 rsmI 2.1.1.198 - H ko:K07056 - ko00000,ko01000,ko03009 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PBHJGNOG_02819 1.04e-171 - - - S - - - Transposase
PBHJGNOG_02820 1.24e-168 yjjG - - S ko:K07025 - ko00000 HAD hydrolase, TIGR02254 family
PBHJGNOG_02821 4.82e-147 - - - U ko:K05595 - ko00000,ko02000 UPF0056 membrane protein
PBHJGNOG_02822 0.0 - - - S ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_02823 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_02824 7.91e-120 - - - S - - - Lipid-binding putative hydrolase
PBHJGNOG_02825 1.76e-168 - - - S - - - Domain of unknown function (DUF5012)
PBHJGNOG_02826 0.0 - - - H - - - Susd and RagB outer membrane lipoprotein
PBHJGNOG_02827 0.0 - - - P - - - Psort location OuterMembrane, score
PBHJGNOG_02828 5.92e-280 - - - L - - - Belongs to the 'phage' integrase family
PBHJGNOG_02829 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_02830 0.0 - - - H - - - Susd and RagB outer membrane lipoprotein
PBHJGNOG_02831 1.92e-283 hflX - - S ko:K03665 - ko00000,ko03009 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PBHJGNOG_02832 4.17e-192 nudC 3.6.1.22 - L ko:K03426 ko00760,ko01100,ko04146,map00760,map01100,map04146 ko00000,ko00001,ko01000 COG COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding
PBHJGNOG_02833 1.38e-137 - - - T - - - COG COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
PBHJGNOG_02834 1.28e-240 oatA - - I - - - Acyltransferase family
PBHJGNOG_02835 3.29e-279 - - - S ko:K07148 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02836 2.71e-75 - - - S - - - Domain of unknown function (DUF4870)
PBHJGNOG_02837 1.66e-58 - - - S - - - zinc-ribbon domain
PBHJGNOG_02840 1.08e-89 - - - - - - - -
PBHJGNOG_02841 0.0 atpD 3.6.3.14 - C ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PBHJGNOG_02842 5.3e-51 atpC - - C ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 ATP synthase, delta epsilon subunit, beta-sandwich domain protein
PBHJGNOG_02843 5.76e-82 - - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_02844 1.16e-265 atpB - - C ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko03110 it plays a direct role in the translocation of protons across the membrane
PBHJGNOG_02845 0.0 - - - - ko:K02316,ko:K06919 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 -
PBHJGNOG_02846 0.0 glmS 2.6.1.16 - M ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 ko00000,ko00001,ko01000,ko01002 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PBHJGNOG_02847 0.0 purF 2.4.2.14 - F ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 Psort location Cytoplasmic, score 8.96
PBHJGNOG_02848 1.1e-139 - - - S - - - Domain of unknown function (DUF4465)
PBHJGNOG_02849 0.0 - - - S - - - COG NOG23380 non supervised orthologous group
PBHJGNOG_02850 0.0 - - - H - - - COG4206 Outer membrane cobalamin receptor protein
PBHJGNOG_02851 5.58e-202 - - - S - - - Cell surface protein
PBHJGNOG_02852 0.0 - - - T - - - Domain of unknown function (DUF5074)
PBHJGNOG_02853 0.0 - - - T - - - Domain of unknown function (DUF5074)
PBHJGNOG_02854 5.07e-146 - - - S - - - protein conserved in bacteria
PBHJGNOG_02855 0.0 - - - M - - - TonB-dependent receptor
PBHJGNOG_02856 6.5e-81 - - - - - - - -
PBHJGNOG_02857 2.5e-246 - - - - - - - -
PBHJGNOG_02858 1.01e-203 - - - F ko:K01173 ko04210,map04210 ko00000,ko00001,ko03029 DNA/RNA non-specific endonuclease
PBHJGNOG_02859 4.21e-224 - - - S - - - Endonuclease Exonuclease phosphatase family
PBHJGNOG_02860 2.01e-53 - - - P - - - Psort location OuterMembrane, score
PBHJGNOG_02861 0.0 - - - P - - - Psort location OuterMembrane, score
PBHJGNOG_02862 1.62e-189 - - - - - - - -
PBHJGNOG_02863 5.64e-242 - 2.7.11.1 - S ko:K07154 - ko00000,ko01000,ko01001,ko02048 Psort location Cytoplasmic, score 8.96
PBHJGNOG_02864 1.98e-65 - - - K - - - sequence-specific DNA binding
PBHJGNOG_02865 1.97e-293 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02866 7.76e-108 cyaA 4.6.1.1 - S ko:K01768 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_02867 1.14e-256 - - - P - - - phosphate-selective porin
PBHJGNOG_02868 2.39e-18 - - - - - - - -
PBHJGNOG_02869 8.54e-163 prfB - - J ko:K02836 - ko00000,ko03012 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PBHJGNOG_02870 1.19e-298 - - - G - - - COG2407 L-fucose isomerase and related
PBHJGNOG_02871 7.6e-213 - 3.1.3.15 - E ko:K04486 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_02872 1.62e-306 yfmR - - S ko:K15738 - ko00000,ko02000 ABC transporter, ATP-binding protein
PBHJGNOG_02873 4.29e-188 - - - N - - - COG NOG06100 non supervised orthologous group
PBHJGNOG_02874 0.0 - - - T - - - PAS domain S-box protein
PBHJGNOG_02875 0.0 nuoN 1.6.5.3 - C ko:K00343 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PBHJGNOG_02876 6.94e-235 nuoM 1.6.5.3 - C ko:K00342 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 proton-translocating NADH-quinone oxidoreductase, chain M
PBHJGNOG_02877 6.4e-54 - - - S - - - Domain of unknown function (DUF4248)
PBHJGNOG_02878 0.0 - - - L - - - Primase C terminal 1 (PriCT-1)
PBHJGNOG_02879 2.15e-123 gcvP 1.4.4.2 - E ko:K00281,ko:K00283 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 ko00000,ko00001,ko00002,ko01000 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PBHJGNOG_02880 1.32e-136 - - - C - - - Nitroreductase family
PBHJGNOG_02881 1.98e-258 hpaIIR 3.1.21.4 - L ko:K01155 - ko00000,ko01000,ko02048 COG NOG26934 non supervised orthologous group
PBHJGNOG_02882 3.06e-137 yigZ - - S - - - YigZ family
PBHJGNOG_02883 8.2e-308 - - - S - - - Conserved protein
PBHJGNOG_02884 4.92e-213 serA 1.1.1.399, 1.1.1.95 - C ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PBHJGNOG_02885 5.4e-40 serC 2.6.1.52 - E ko:K00831 ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PBHJGNOG_02886 0.0 - - - T - - - cheY-homologous receiver domain
PBHJGNOG_02887 8.19e-316 - - - T ko:K07713 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains
PBHJGNOG_02888 1.35e-201 - 5.2.1.8 - M ko:K01802,ko:K03768 - ko00000,ko01000,ko03110 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PBHJGNOG_02889 9.08e-299 - - - S ko:K07263 - ko00000,ko01000,ko01002 Peptidase M16 inactive domain protein
PBHJGNOG_02890 0.0 norM - - V ko:K03327 - ko00000,ko02000 MATE efflux family protein
PBHJGNOG_02891 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBHJGNOG_02893 1.97e-188 yfiO - - S ko:K05807 - ko00000,ko02000 outer membrane assembly lipoprotein YfiO
PBHJGNOG_02894 1.02e-94 - - - S - - - ACT domain protein
PBHJGNOG_02895 1.73e-313 - 6.2.1.30 - H ko:K01912 ko00360,ko01120,ko05111,map00360,map01120,map05111 ko00000,ko00001,ko01000 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
PBHJGNOG_02896 8.21e-139 folE 3.5.4.16 - F ko:K01495 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 GTP cyclohydrolase I
PBHJGNOG_02897 4.38e-102 - - - S - - - Sporulation and cell division repeat protein
PBHJGNOG_02898 3.97e-176 tpiA 5.3.1.1 - G ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PBHJGNOG_02899 1.05e-294 doxX - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_02900 3.31e-123 - - - S - - - COG NOG27206 non supervised orthologous group
PBHJGNOG_02901 5.55e-211 mepM_1 - - M - - - Peptidase, M23
PBHJGNOG_02902 8.41e-107 ndk 2.7.4.6 - F ko:K00940 ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016 ko00000,ko00001,ko00002,ko01000,ko04131 Nucleoside diphosphate kinase
PBHJGNOG_02903 0.0 recG 3.6.4.12 - L ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PBHJGNOG_02904 3.16e-152 ispD 2.7.7.60 - I ko:K00991 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
PBHJGNOG_02905 6.84e-127 yajL 3.5.1.124 - S ko:K03152 - ko00000,ko01000,ko01002 Psort location Cytoplasmic, score
PBHJGNOG_02906 2.05e-159 - - - M - - - TonB family domain protein
PBHJGNOG_02907 2.22e-83 - - - U ko:K03559 - ko00000,ko02000 Transport energizing protein, ExbD TolR family
PBHJGNOG_02908 1.09e-162 exbB - - U ko:K03561 - ko00000,ko02000 MotA TolQ ExbB proton channel family
PBHJGNOG_02909 8.82e-170 pdxJ 2.6.99.2 - H ko:K03474 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
PBHJGNOG_02910 6.91e-206 nadK 2.7.1.23 - H ko:K00858 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PBHJGNOG_02911 6.12e-64 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PBHJGNOG_02912 2.71e-98 - - - C - - - lyase activity
PBHJGNOG_02913 2.74e-96 - - - - - - - -
PBHJGNOG_02914 4.44e-222 - - - - - - - -
PBHJGNOG_02915 3.35e-247 - - - S - - - Oxidoreductase, NAD-binding domain protein
PBHJGNOG_02916 4.15e-108 guaD 3.5.4.3 - FJ ko:K01487 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000 Cytidine and deoxycytidylate deaminase zinc-binding region
PBHJGNOG_02917 5.43e-186 - - - - - - - -
PBHJGNOG_02918 0.0 - - - H - - - Susd and RagB outer membrane lipoprotein
PBHJGNOG_02919 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_02920 0.0 - - - I - - - Psort location OuterMembrane, score
PBHJGNOG_02921 3.47e-53 - - - - - - - -
PBHJGNOG_02924 0.000198 - - - - - - - -
PBHJGNOG_02931 0.0 - - - L - - - DNA primase
PBHJGNOG_02937 2.03e-36 - - - - - - - -
PBHJGNOG_02938 3.07e-26 - - - - - - - -
PBHJGNOG_02942 0.0 - - - S - - - TonB-dependent Receptor Plug Domain
PBHJGNOG_02943 1.61e-249 - - - - - - - -
PBHJGNOG_02944 3.79e-20 - - - S - - - Fic/DOC family
PBHJGNOG_02946 3.83e-104 - - - - - - - -
PBHJGNOG_02947 7.21e-187 - - - K - - - YoaP-like
PBHJGNOG_02948 2.73e-128 - - - - - - - -
PBHJGNOG_02949 1.17e-164 - - - - - - - -
PBHJGNOG_02950 7.8e-11 - - - S - - - Domain of unknown function (DUF4252)
PBHJGNOG_02951 6.42e-18 - - - C - - - lyase activity
PBHJGNOG_02952 2.97e-28 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PBHJGNOG_02954 4.77e-178 - - - EG - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_02956 3.49e-130 - - - CO - - - Redoxin family
PBHJGNOG_02957 8.89e-172 cypM_1 - - H - - - Methyltransferase domain protein
PBHJGNOG_02958 7.45e-33 - - - - - - - -
PBHJGNOG_02959 2e-103 - - - - - - - -
PBHJGNOG_02960 1.51e-91 gloA 4.4.1.5 - E ko:K01759 ko00620,map00620 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_02961 7.84e-264 - - - S ko:K03646 - ko00000,ko02000 Domain of unknown function (DUF4468) with TBP-like fold
PBHJGNOG_02962 1.84e-181 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_02963 1.25e-155 pdxH 1.4.3.5 - H ko:K00275 ko00750,ko01100,ko01120,map00750,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP)
PBHJGNOG_02964 5.26e-172 - - - S ko:K06911 - ko00000 Belongs to the pirin family
PBHJGNOG_02965 6.95e-238 ldhA 1.1.1.28 - C ko:K03778 ko00620,ko01120,map00620,map01120 ko00000,ko00001,ko01000 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PBHJGNOG_02966 0.0 - - - I ko:K06076 - ko00000,ko02000 COG COG2067 Long-chain fatty acid transport protein
PBHJGNOG_02967 0.0 - - - S - - - COG NOG10142 non supervised orthologous group
PBHJGNOG_02968 1.59e-115 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PBHJGNOG_02969 6.46e-83 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2141)
PBHJGNOG_02970 0.0 - - - P - - - Outer membrane protein beta-barrel family
PBHJGNOG_02971 1.71e-131 - - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_02972 5.64e-59 marR - - K - - - Winged helix DNA-binding domain
PBHJGNOG_02974 2.69e-81 - - - - - - - -
PBHJGNOG_02975 5.4e-152 yhhQ - - S ko:K09125 - ko00000 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
PBHJGNOG_02976 4.69e-161 queC 6.3.4.20 - F ko:K06920 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko01000,ko03016 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
PBHJGNOG_02977 4.2e-110 queF 1.7.1.13 - H ko:K09457 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko01000,ko03016 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
PBHJGNOG_02978 1.15e-146 - - - S ko:K06950 - ko00000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_02979 6.47e-110 rlmH 2.1.1.177 - J ko:K00783 - ko00000,ko01000,ko03009 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PBHJGNOG_02980 7.1e-83 - - - S - - - COG NOG32209 non supervised orthologous group
PBHJGNOG_02981 0.0 mutA 5.4.99.2 - I ko:K01847 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 methylmalonyl-CoA mutase small subunit
PBHJGNOG_02982 0.0 - - - S ko:K06158 - ko00000,ko03012 Psort location CytoplasmicMembrane, score
PBHJGNOG_02983 2.32e-112 - - - U - - - COG NOG14449 non supervised orthologous group
PBHJGNOG_02984 4.13e-99 - - - U ko:K03559 - ko00000,ko02000 COG NOG14448 non supervised orthologous group
PBHJGNOG_02985 7.47e-133 - - - K - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_02986 0.0 - - - S - - - IgA Peptidase M64
PBHJGNOG_02987 1.62e-111 asnC - - K ko:K03718 - ko00000,ko03000 transcriptional regulator, AsnC family
PBHJGNOG_02988 2.19e-116 folA 1.5.1.3 - H ko:K00287 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PBHJGNOG_02989 8.15e-200 thyA 2.1.1.45 - F ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PBHJGNOG_02990 6.01e-300 cls - - M ko:K06131 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the phospholipase D family. Cardiolipin synthase subfamily
PBHJGNOG_02991 2.5e-64 - - - S - - - Domain of unknown function (DUF5056)
PBHJGNOG_02992 3.67e-126 rpoE - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PBHJGNOG_02993 2.17e-163 - - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_02994 0.0 rsmF - - J - - - NOL1 NOP2 sun family
PBHJGNOG_02995 1.58e-202 - - - - - - - -
PBHJGNOG_02996 2.1e-269 - - - MU - - - outer membrane efflux protein
PBHJGNOG_02997 0.0 czcA - - P - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PBHJGNOG_02998 2.32e-202 - - - M - - - Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PBHJGNOG_02999 0.0 - - - S - - - COG NOG28036 non supervised orthologous group
PBHJGNOG_03000 0.0 uvrD2 - - L - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_03001 6.15e-139 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03002 7e-54 - - - S - - - COG NOG18433 non supervised orthologous group
PBHJGNOG_03005 2.8e-154 - - - L - - - COG NOG14720 non supervised orthologous group
PBHJGNOG_03008 5.19e-73 - - - - - - - -
PBHJGNOG_03010 4.3e-51 rfbD 1.1.1.133 - M ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PBHJGNOG_03011 3.29e-24 - - - - - - - -
PBHJGNOG_03012 5.26e-31 - - - M - - - COG3209 Rhs family protein
PBHJGNOG_03014 1.93e-54 - - - - - - - -
PBHJGNOG_03015 1.24e-272 - - - - - - - -
PBHJGNOG_03021 4.24e-63 - - - S - - - ASCH
PBHJGNOG_03022 4.48e-176 - - - K - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_03023 0.0 - - - - - - - -
PBHJGNOG_03025 6.34e-109 - - - - - - - -
PBHJGNOG_03026 3.16e-98 - - - - - - - -
PBHJGNOG_03027 6.44e-258 - - - - - - - -
PBHJGNOG_03028 2.15e-133 - - - S - - - Phage prohead protease, HK97 family
PBHJGNOG_03030 2.51e-47 - - - - - - - -
PBHJGNOG_03031 0.0 valS 6.1.1.9 - J ko:K01873 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PBHJGNOG_03032 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBHJGNOG_03033 1.79e-126 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PBHJGNOG_03034 5.32e-242 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PBHJGNOG_03035 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_03036 0.0 - - - E - - - Pfam:SusD
PBHJGNOG_03037 0.0 - 3.2.1.50 - G ko:K01205 ko00531,ko01100,ko04142,map00531,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko04147 Alpha-N-acetylglucosaminidase
PBHJGNOG_03038 3.75e-98 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_03039 2.96e-264 - - - S - - - COG NOG26558 non supervised orthologous group
PBHJGNOG_03040 1.1e-251 secA - - U ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PBHJGNOG_03041 1.04e-202 - - - S - - - Susd and RagB outer membrane lipoprotein
PBHJGNOG_03042 3.07e-240 - - - G - - - Putative glycoside hydrolase Family 18, chitinase_18
PBHJGNOG_03043 5.41e-295 - - - S - - - Concanavalin A-like lectin/glucanases superfamily
PBHJGNOG_03044 3.23e-219 - - - S - - - Domain of unknown function (DUF1735)
PBHJGNOG_03045 6.08e-177 - - - S - - - Protein of unknown function (DUF1573)
PBHJGNOG_03046 0.0 - 3.2.1.51 GH29 G ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 F5 8 type C domain protein
PBHJGNOG_03047 0.0 - 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 glycosyl hydrolase, family 3
PBHJGNOG_03048 4.36e-83 dps - - P ko:K04047 - ko00000,ko03036 Belongs to the Dps family
PBHJGNOG_03049 2.55e-137 - - - M - - - Bacterial sugar transferase
PBHJGNOG_03050 4.55e-299 pglE - - E - - - Belongs to the DegT DnrJ EryC1 family
PBHJGNOG_03052 5.64e-174 - - - M ko:K01991 ko02026,map02026 ko00000,ko00001,ko02000 COG1596 Periplasmic protein involved in polysaccharide export
PBHJGNOG_03053 0.0 - - - DM - - - Chain length determinant protein
PBHJGNOG_03054 3.11e-08 - - - S - - - ATPase (AAA
PBHJGNOG_03055 0.0 - - - T - - - helix_turn_helix, arabinose operon control protein
PBHJGNOG_03057 1.37e-313 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_03058 4.82e-88 - - - L - - - COG NOG29624 non supervised orthologous group
PBHJGNOG_03059 1.99e-71 - - - - - - - -
PBHJGNOG_03060 4.64e-127 - - - V - - - N-acetylmuramoyl-L-alanine amidase
PBHJGNOG_03061 0.0 - - - S - - - COG NOG22466 non supervised orthologous group
PBHJGNOG_03063 1.03e-36 - - - L - - - DNA photolyase activity
PBHJGNOG_03064 3.05e-210 - - - S - - - non supervised orthologous group
PBHJGNOG_03065 9.5e-289 - - - G - - - Glycosyl hydrolases family 18
PBHJGNOG_03066 1.86e-286 - - - N - - - Concanavalin A-like lectin/glucanases superfamily
PBHJGNOG_03067 1.33e-209 - - - S - - - Domain of unknown function
PBHJGNOG_03068 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain protein
PBHJGNOG_03069 2.61e-236 - - - PT - - - Domain of unknown function (DUF4974)
PBHJGNOG_03070 9.52e-141 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor, Bacteroides expansion family 1
PBHJGNOG_03071 0.0 addA - - L - - - Belongs to the helicase family. UvrD subfamily
PBHJGNOG_03072 2.96e-156 pflA_1 1.97.1.4 - O ko:K04069 - ko00000,ko01000 4Fe-4S single cluster domain
PBHJGNOG_03073 1.69e-190 - - - M ko:K03832 - ko00000,ko02000 Gram-negative bacterial TonB protein C-terminal
PBHJGNOG_03074 0.0 - - - L - - - DNA-dependent ATPase I and helicase II
PBHJGNOG_03075 2.93e-259 pleD 2.7.13.3 - T ko:K11527 - ko00000,ko01000,ko01001,ko02022 Response regulator receiver domain protein
PBHJGNOG_03076 2.22e-231 - 4.1.1.35 - GM ko:K08678 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko00002,ko01000 NAD dependent epimerase dehydratase family
PBHJGNOG_03077 8.65e-28 - - - - - - - -
PBHJGNOG_03078 7.72e-173 - - - - - - - -
PBHJGNOG_03079 1.28e-226 - - - - - - - -
PBHJGNOG_03080 5.05e-232 - - - S - - - COG NOG32009 non supervised orthologous group
PBHJGNOG_03081 0.0 - - - S - - - COG NOG34047 non supervised orthologous group
PBHJGNOG_03082 0.0 - - - M - - - COG NOG23378 non supervised orthologous group
PBHJGNOG_03083 7.09e-141 - - - M - - - Protein of unknown function (DUF3575)
PBHJGNOG_03084 0.0 - - - - - - - -
PBHJGNOG_03086 1.9e-127 ibrB - - K - - - Psort location Cytoplasmic, score
PBHJGNOG_03087 1.04e-97 - - - S - - - Phosphoadenosine phosphosulfate reductase family
PBHJGNOG_03088 1.06e-110 tnaA 4.1.99.1 - E ko:K01667 ko00380,map00380 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_03089 2.81e-68 - - - S ko:K06975 - ko00000 GCN5-related N-acetyl-transferase
PBHJGNOG_03090 5.14e-50 - - - S - - - Divergent 4Fe-4S mono-cluster
PBHJGNOG_03091 3.39e-143 sfp - - H - - - Belongs to the P-Pant transferase superfamily
PBHJGNOG_03092 1.8e-306 gldE - - S - - - Gliding motility-associated protein GldE
PBHJGNOG_03093 5.6e-98 ssb - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Single-stranded DNA-binding protein
PBHJGNOG_03094 6.51e-255 mutY - - L ko:K03575 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 COG1194 A G-specific DNA glycosylase
PBHJGNOG_03095 1.66e-56 hupA - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Belongs to the bacterial histone-like protein family
PBHJGNOG_03096 5.55e-106 nuoF 1.12.1.3, 1.6.5.3 - C ko:K00335,ko:K18331 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
PBHJGNOG_03097 0.0 hndD 1.12.1.3, 1.17.1.9 - C ko:K00123,ko:K18332 ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200 ko00000,ko00001,ko01000 COG COG4624 Iron only hydrogenase large subunit, C-terminal domain
PBHJGNOG_03098 9.02e-113 hndA 1.12.1.3 - C ko:K18330 - ko00000,ko01000 COG COG1905 NADH ubiquinone oxidoreductase 24 kD subunit
PBHJGNOG_03099 4.25e-249 fabH 2.3.1.180 - I ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PBHJGNOG_03101 0.0 - - - S ko:K15738 - ko00000,ko02000 ATP-binding cassette protein, ChvD family
PBHJGNOG_03102 0.0 - - - P - - - Psort location OuterMembrane, score
PBHJGNOG_03104 5.5e-261 - - - S - - - Endonuclease Exonuclease phosphatase family protein
PBHJGNOG_03105 0.0 - - - M - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_03106 1.02e-278 - - - M - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_03107 0.0 - - - S - - - Putative polysaccharide deacetylase
PBHJGNOG_03108 9.22e-211 - - - M - - - Glycosyltransferase, group 2 family protein
PBHJGNOG_03109 1.21e-288 - - - M - - - Glycosyl transferases group 1
PBHJGNOG_03110 4.33e-281 - - - M - - - Glycosyltransferase, group 1 family protein
PBHJGNOG_03111 5.44e-229 - - - M - - - Pfam:DUF1792
PBHJGNOG_03112 5.04e-280 - - - M - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_03113 0.0 - - - S ko:K03328 - ko00000 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PBHJGNOG_03114 1.7e-210 - - - M - - - Glycosyltransferase like family 2
PBHJGNOG_03115 2.38e-276 - - - M - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_03116 2.49e-63 - - - K - - - Helix-turn-helix XRE-family like proteins
PBHJGNOG_03117 1.65e-204 - - - S - - - Domain of unknown function (DUF4373)
PBHJGNOG_03118 0.0 - 3.6.4.12 - L ko:K17680 - ko00000,ko01000,ko03029 Psort location Cytoplasmic, score 8.96
PBHJGNOG_03119 1.12e-103 - - - E - - - Glyoxalase-like domain
PBHJGNOG_03120 1.21e-53 - - - S - - - Domain of unknown function (DUF4248)
PBHJGNOG_03122 9.86e-268 - - - C - - - Oxidoreductase, FAD FMN-binding protein
PBHJGNOG_03123 5.82e-189 - - - IQ - - - Oxidoreductase, short chain dehydrogenase reductase family protein
PBHJGNOG_03124 2.92e-231 pfkA 2.7.1.11 - F ko:K00850 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230 ko00000,ko00001,ko00002,ko01000,ko01009,ko03019 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PBHJGNOG_03125 2.85e-208 ispH 1.17.7.4 - IM ko:K03527 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PBHJGNOG_03126 1.89e-158 cmk 2.7.4.25 - F ko:K00945 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the cytidylate kinase family. Type 1 subfamily
PBHJGNOG_03127 3.14e-156 - - - U ko:K03832 - ko00000,ko02000 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PBHJGNOG_03128 6.58e-227 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29 - H ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the FPP GGPP synthase family
PBHJGNOG_03130 0.0 pepP 3.4.11.9 - E ko:K01262 - ko00000,ko01000,ko01002 Psort location Cytoplasmic, score
PBHJGNOG_03131 0.0 rpoN - - K ko:K03092 ko02020,ko05111,map02020,map05111 ko00000,ko00001,ko03021 COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog
PBHJGNOG_03132 1.68e-149 - - - I - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03133 2.82e-87 gcvH - - E ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 ko00000,ko00001,ko00002 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
PBHJGNOG_03134 1.64e-238 - - - S - - - COG NOG14472 non supervised orthologous group
PBHJGNOG_03135 2.41e-135 coaE 2.7.1.24 - H ko:K00859 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PBHJGNOG_03136 3.12e-95 - - - S - - - COG NOG14473 non supervised orthologous group
PBHJGNOG_03137 6.88e-54 - - - - - - - -
PBHJGNOG_03138 0.0 clpB - - O ko:K03695 ko04213,map04213 ko00000,ko00001,ko03110 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PBHJGNOG_03139 3.09e-133 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_03140 2.43e-209 cysL - - K - - - LysR substrate binding domain protein
PBHJGNOG_03141 6.98e-78 yccF - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_03142 6.32e-228 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03143 1.46e-240 recA - - L ko:K03553 ko03440,map03440 ko00000,ko00001,ko00002,ko03400 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PBHJGNOG_03144 7.84e-106 bcp 1.11.1.15 - O ko:K03564 - ko00000,ko01000 bacterioferritin comigratory protein
PBHJGNOG_03145 2.71e-306 LYS1 1.5.1.7 - E ko:K00290 ko00300,ko00310,ko01100,ko01110,ko01130,ko01230,map00300,map00310,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 COG1748 Saccharopine dehydrogenase and related
PBHJGNOG_03146 1.25e-299 - - - - - - - -
PBHJGNOG_03147 3.54e-184 - - - O - - - META domain
PBHJGNOG_03148 0.0 cydA 1.10.3.14 - C ko:K00425 ko00190,ko01100,ko02020,map00190,map01100,map02020 ko00000,ko00001,ko00002,ko01000 COG1271 Cytochrome bd-type quinol oxidase, subunit 1
PBHJGNOG_03149 8.29e-51 - - - S - - - COG NOG17489 non supervised orthologous group
PBHJGNOG_03150 1.66e-307 - - - MU ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 type I secretion outer membrane protein, TolC family
PBHJGNOG_03151 1.37e-271 - - - M ko:K02005 - ko00000 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PBHJGNOG_03152 3.95e-169 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
PBHJGNOG_03153 6.4e-280 - - - V ko:K02004 - ko00000,ko00002,ko02000 Efflux ABC transporter, permease protein
PBHJGNOG_03154 1.69e-257 cheA - - T - - - two-component sensor histidine kinase
PBHJGNOG_03155 5.22e-162 - - - K - - - COG3279 Response regulator of the LytR AlgR family
PBHJGNOG_03156 4.33e-170 yoqW - - E - - - SOS response associated peptidase (SRAP)
PBHJGNOG_03157 9.82e-234 yfeX - - P ko:K07223 - ko00000 Dyp-type peroxidase family
PBHJGNOG_03158 2.64e-165 pgl 3.1.1.31 - G ko:K01057 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 COG0363 6-phosphogluconolactonase Glucosamine-6-phosphate isomerase deaminase
PBHJGNOG_03159 0.0 zwf 1.1.1.363, 1.1.1.49 - G ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PBHJGNOG_03160 0.0 gnd 1.1.1.343, 1.1.1.44 - H ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PBHJGNOG_03161 1.67e-255 sstT - - U - - - Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PBHJGNOG_03162 6.93e-261 gmd 4.2.1.47 - M ko:K01711 ko00051,ko00520,ko01100,map00051,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
PBHJGNOG_03163 1.41e-269 fcl 1.1.1.271 - GM ko:K02377 ko00051,ko00520,ko01100,map00051,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction
PBHJGNOG_03164 0.0 - 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 Psort location CytoplasmicMembrane, score
PBHJGNOG_03165 3.03e-154 - - - S - - - Peptidase C14 caspase catalytic subunit p20
PBHJGNOG_03166 0.0 fbp 3.1.3.11 - G ko:K04041 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3
PBHJGNOG_03167 0.0 - - - P ko:K07085 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03168 1.22e-107 - - - - - - - -
PBHJGNOG_03170 0.0 - - - G - - - COG NOG09951 non supervised orthologous group
PBHJGNOG_03171 2.24e-106 - - - S - - - Protein of unknown function (DUF3828)
PBHJGNOG_03172 5.28e-96 - - - - - - - -
PBHJGNOG_03173 1.11e-132 - - - S - - - Tetratricopeptide repeat
PBHJGNOG_03174 0.0 - - - S - - - TonB-dependent Receptor Plug Domain
PBHJGNOG_03175 1.64e-262 - - - S - - - Domain of unknown function (DUF4361)
PBHJGNOG_03176 0.0 - - - P ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_03177 0.0 - - - P - - - TonB dependent receptor
PBHJGNOG_03178 0.0 - - - S - - - IPT/TIG domain
PBHJGNOG_03179 1e-108 - - - G - - - COG NOG09951 non supervised orthologous group
PBHJGNOG_03180 1.42e-141 tsf - - J ko:K02357 - ko00000,ko03012,ko03029 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PBHJGNOG_03181 7.79e-78 - - - J ko:K03113 ko03013,map03013 ko00000,ko00001,ko03012 COG0023 Translation initiation factor 1 (eIF-1 SUI1) and related
PBHJGNOG_03182 0.0 - - - S - - - Carboxypeptidase regulatory-like domain
PBHJGNOG_03183 3.17e-157 rex - - K ko:K01926 - ko00000,ko03000 Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PBHJGNOG_03184 2.53e-146 fahA - - Q - - - 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, fumarylacetoacetate hydrolase family K01828
PBHJGNOG_03185 6.59e-111 ispF 4.6.1.12 - H ko:K01770 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
PBHJGNOG_03186 4.43e-251 - - - S - - - Ser Thr phosphatase family protein
PBHJGNOG_03187 2.17e-209 - - - S - - - COG NOG24904 non supervised orthologous group
PBHJGNOG_03188 7.18e-202 moxR - - S ko:K03924 - ko00000,ko01000 ATPase family associated with various cellular activities (AAA)
PBHJGNOG_03189 1.16e-207 - - - S - - - protein (some members contain a von Willebrand factor type A (vWA) domain)
PBHJGNOG_03190 5.14e-249 - - - O - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_03191 2.48e-228 batA - - S ko:K07114 - ko00000,ko02000 Von Willebrand factor type A domain
PBHJGNOG_03192 2.32e-236 batB - - S ko:K07114 - ko00000,ko02000 Von Willebrand factor type A domain
PBHJGNOG_03193 5.86e-125 batC - - S - - - Tetratricopeptide repeat protein
PBHJGNOG_03194 0.0 batD - - S - - - COG NOG06393 non supervised orthologous group
PBHJGNOG_03195 1.01e-186 batE - - T - - - COG NOG22299 non supervised orthologous group
PBHJGNOG_03196 6.54e-63 - - - S - - - COG NOG19094 non supervised orthologous group
PBHJGNOG_03197 2.09e-266 uspA - - T - - - COG0589 Universal stress protein UspA and related nucleotide-binding
PBHJGNOG_03198 4.95e-284 - - - S - - - Tetratricopeptide repeat protein
PBHJGNOG_03199 0.0 gyrA 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PBHJGNOG_03200 0.0 clpC - - O ko:K03696 ko01100,map01100 ko00000,ko03110 Belongs to the ClpA ClpB family
PBHJGNOG_03201 0.0 htpG - - T ko:K04079 ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418 ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147 ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBHJGNOG_03202 0.0 - - - M ko:K07001 - ko00000 esterase of the alpha-beta hydrolase superfamily
PBHJGNOG_03203 6.34e-228 - 3.2.1.14, 3.2.1.4 GH18,GH5,GH9 G ko:K01179,ko:K01183 ko00500,ko00520,ko01100,map00500,map00520,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 18 family
PBHJGNOG_03204 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBHJGNOG_03205 0.0 - - - P - - - TonB-dependent Receptor Plug Domain
PBHJGNOG_03206 0.0 - - - S - - - amine dehydrogenase activity
PBHJGNOG_03207 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_03208 0.0 - - - P ko:K21572 - ko00000,ko02000 Psort location OuterMembrane, score
PBHJGNOG_03209 6.18e-206 - - - S - - - Domain of unknown function (DUF4361)
PBHJGNOG_03210 0.0 - - - M - - - COG NOG07608 non supervised orthologous group
PBHJGNOG_03212 5.26e-179 - - - S - - - Virulence protein RhuM family
PBHJGNOG_03213 8.31e-13 - - - S - - - cog cog3943
PBHJGNOG_03214 6.11e-142 - - - L - - - DNA-binding protein
PBHJGNOG_03215 5.5e-207 - - - S - - - COG3943 Virulence protein
PBHJGNOG_03216 2.94e-90 - - - - - - - -
PBHJGNOG_03217 2.06e-224 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PBHJGNOG_03218 1.41e-119 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor, ECF subfamily
PBHJGNOG_03219 1.61e-147 - - - S - - - Membrane
PBHJGNOG_03220 6.29e-195 - - - K - - - helix_turn_helix, arabinose operon control protein
PBHJGNOG_03221 0.0 dxs2 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PBHJGNOG_03222 5.14e-245 - - - S ko:K06889 - ko00000 COG COG1073 Hydrolases of the alpha beta superfamily
PBHJGNOG_03223 2.73e-136 - - - M - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_03224 1.92e-279 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 COG COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
PBHJGNOG_03225 1.47e-215 - - - K - - - transcriptional regulator (AraC family)
PBHJGNOG_03226 2.43e-213 - - - C - - - Flavodoxin
PBHJGNOG_03227 1.69e-275 - 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Cupin domain
PBHJGNOG_03228 2.39e-209 - - - M - - - ompA family
PBHJGNOG_03229 9.06e-108 - - - M - - - Outer membrane protein beta-barrel domain
PBHJGNOG_03230 2.89e-203 - - - P ko:K07217 - ko00000 Manganese containing catalase
PBHJGNOG_03231 6.17e-46 - - - - - - - -
PBHJGNOG_03232 1.11e-31 - - - S - - - Transglycosylase associated protein
PBHJGNOG_03233 2.44e-50 - - - S - - - YtxH-like protein
PBHJGNOG_03235 1.27e-164 - - - S ko:K07058 - ko00000 Virulence factor BrkB
PBHJGNOG_03236 9.61e-246 - - - M - - - ompA family
PBHJGNOG_03237 7.5e-105 - - - S - - - COG NOG17277 non supervised orthologous group
PBHJGNOG_03238 7.62e-126 - - - T - - - COG COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
PBHJGNOG_03239 1.06e-69 sugE - - P ko:K11741 - ko00000,ko02000 Multidrug resistance protein, SMR family
PBHJGNOG_03240 1.09e-309 - - - V - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03241 2.04e-123 - - - T - - - Cyclic nucleotide-monophosphate binding domain
PBHJGNOG_03242 1.03e-207 - - - K - - - methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC XylS family)
PBHJGNOG_03243 1.91e-98 - - - S - - - Pyridoxamine 5'-phosphate oxidase like
PBHJGNOG_03244 1.4e-198 - - - S - - - aldo keto reductase family
PBHJGNOG_03245 1.59e-141 - - - S - - - DJ-1/PfpI family
PBHJGNOG_03246 0.0 - - - S - - - Tat pathway signal sequence domain protein
PBHJGNOG_03247 2.97e-246 yccM - - C - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_03248 0.0 - - - S ko:K07079 - ko00000 of the aldo keto reductase family
PBHJGNOG_03249 1.67e-99 - - - S - - - COG COG4771 Outer membrane receptor for ferrienterochelin and colicins
PBHJGNOG_03250 0.0 - - - H ko:K02014 - ko00000,ko02000 COG COG4771 Outer membrane receptor for ferrienterochelin and colicins
PBHJGNOG_03251 6.95e-111 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PBHJGNOG_03252 0.0 - - - T - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_03253 4.78e-271 - - - V ko:K01992 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03254 6.76e-269 - - - CP ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
PBHJGNOG_03255 1.54e-223 - - - M ko:K01993 - ko00000 Auxiliary transport protein, membrane fusion protein
PBHJGNOG_03256 0.0 - - - MU - - - Psort location OuterMembrane, score
PBHJGNOG_03258 1.9e-220 - - - L - - - Phage integrase SAM-like domain
PBHJGNOG_03266 4.3e-71 - - - - - - - -
PBHJGNOG_03267 2.1e-33 - - - S - - - Protein of unknown function (DUF2971)
PBHJGNOG_03268 2.01e-18 - - - K - - - Helix-turn-helix
PBHJGNOG_03273 1.19e-37 - - - - - - - -
PBHJGNOG_03274 8.21e-46 - - - - - - - -
PBHJGNOG_03275 1.05e-21 - - - S - - - PcfK-like protein
PBHJGNOG_03276 1.15e-117 - - - S - - - PcfJ-like protein
PBHJGNOG_03280 3.93e-52 - - - V - - - Bacteriophage Lambda NinG protein
PBHJGNOG_03281 1.62e-15 - - - - - - - -
PBHJGNOG_03282 2.82e-172 - - - - - - - -
PBHJGNOG_03283 1.22e-117 - - - P - - - Sulfatase
PBHJGNOG_03284 9.94e-107 - - - U - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03286 8.11e-97 - - - L - - - DNA-binding protein
PBHJGNOG_03287 8.18e-36 - - - S - - - Domain of unknown function (DUF4248)
PBHJGNOG_03288 0.0 - - - T - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_03289 6.31e-128 - - - - - - - -
PBHJGNOG_03290 1.44e-57 - - - S - - - WYL_2, Sm-like SH3 beta-barrel fold
PBHJGNOG_03291 6.68e-21 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_03293 5.15e-184 - - - L - - - HNH endonuclease domain protein
PBHJGNOG_03294 5.27e-190 - - - S ko:K06921 - ko00000 ATPase (AAA superfamily)
PBHJGNOG_03295 0.0 - - - T - - - COG NOG26059 non supervised orthologous group
PBHJGNOG_03296 0.0 - - - G - - - Glycosyl hydrolase family 92
PBHJGNOG_03297 1.36e-289 - - - CO - - - amine dehydrogenase activity
PBHJGNOG_03298 0.0 - - - H - - - cobalamin-transporting ATPase activity
PBHJGNOG_03299 0.0 - - - P ko:K02016 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 abc-type fe3 -hydroxamate transport system, periplasmic component
PBHJGNOG_03300 1.63e-79 - - - S - - - Domain of unknown function (DUF4361)
PBHJGNOG_03301 0.0 - 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 glycosyl hydrolase, family 3
PBHJGNOG_03302 0.0 - 3.2.1.24 GH38 G ko:K01191 ko00511,map00511 ko00000,ko00001,ko01000,ko04131 Alpha mannosidase, middle domain
PBHJGNOG_03303 0.0 - - - K ko:K03088 - ko00000,ko03021 DNA-templated transcription, initiation
PBHJGNOG_03304 0.0 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 alpha-galactosidase
PBHJGNOG_03305 1.66e-257 dprA - - LU ko:K04096 - ko00000 Rossmann fold nucleotide-binding protein involved in DNA uptake
PBHJGNOG_03307 7.17e-154 clpP 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PBHJGNOG_03308 1.69e-295 clpX - - O ko:K03544 ko04112,map04112 ko00000,ko00001,ko03110 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PBHJGNOG_03309 0.0 - - - S - - - COG COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PBHJGNOG_03310 0.0 merA - - C ko:K21739 - ko00000 COG COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
PBHJGNOG_03311 1.17e-132 ykgB - - S - - - Psort location CytoplasmicMembrane, score 9.46
PBHJGNOG_03312 1.77e-197 - - - K - - - COG COG2207 AraC-type DNA-binding domain-containing proteins
PBHJGNOG_03313 7.97e-108 cdd 3.5.4.5 - F ko:K01489 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
PBHJGNOG_03314 1.38e-221 lytG - - MNU - - - COG1705 Muramidase (flagellum-specific)
PBHJGNOG_03315 0.0 ndh 1.6.99.3 - C ko:K03885 ko00190,map00190 ko00000,ko00001,ko01000 NADH dehydrogenase, FAD-containing subunit
PBHJGNOG_03316 1.11e-280 - - - M ko:K02005 - ko00000 Efflux transporter, RND family, MFP subunit
PBHJGNOG_03317 3.15e-153 ytrE_3 - - V ko:K02003 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 7.88
PBHJGNOG_03318 6.62e-119 - - - S - - - COG NOG30399 non supervised orthologous group
PBHJGNOG_03319 4.36e-301 - - - V ko:K02004 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03320 1.17e-308 - - - V ko:K02004 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score
PBHJGNOG_03321 0.0 - - - T - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_03322 0.0 - - - MU - - - Psort location OuterMembrane, score
PBHJGNOG_03323 5.68e-314 - - - T ko:K02481 - ko00000,ko02022 acetoacetate metabolism regulatory protein AtoC K07714
PBHJGNOG_03324 3.32e-301 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBHJGNOG_03325 0.0 - - - M - - - COG NOG06397 non supervised orthologous group
PBHJGNOG_03326 0.0 - - - G - - - IPT/TIG domain
PBHJGNOG_03327 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_03328 0.0 - - - P - - - SusD family
PBHJGNOG_03329 5.37e-248 - - - S - - - Domain of unknown function (DUF4361)
PBHJGNOG_03330 7.29e-87 paaI - - Q ko:K02614 ko00360,map00360 ko00000,ko00001,ko01000 phenylacetic acid degradation protein
PBHJGNOG_03331 4.88e-196 - - - NU - - - Protein of unknown function (DUF3108)
PBHJGNOG_03332 0.0 - - - S - - - COG NOG07965 non supervised orthologous group
PBHJGNOG_03333 0.0 lacZ 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 COG3250 Beta-galactosidase beta-glucuronidase
PBHJGNOG_03334 6.64e-247 mtrC - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PBHJGNOG_03336 9.72e-183 uppP 3.6.1.27 - V ko:K06153 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PBHJGNOG_03337 2.06e-46 fjo13 - - S - - - COG NOG19122 non supervised orthologous group
PBHJGNOG_03338 2.03e-194 ftsX - - D ko:K09811 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03036 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily
PBHJGNOG_03339 1.18e-221 - - - H - - - Methyltransferase domain protein
PBHJGNOG_03343 0.0 - - - M - - - COG COG3209 Rhs family protein
PBHJGNOG_03344 4.64e-231 - - - M - - - COG3209 Rhs family protein
PBHJGNOG_03345 6.21e-12 - - - - - - - -
PBHJGNOG_03346 1.46e-122 - 3.5.1.28 - V ko:K01447 - ko00000,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_03347 9.83e-47 - - - L - - - COG NOG31286 non supervised orthologous group
PBHJGNOG_03348 0.0 nrdD 1.1.98.6 - FK ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_03349 3.8e-117 nrdG 1.97.1.4 - C ko:K04068 - ko00000,ko01000 Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PBHJGNOG_03350 0.0 - - - EGP ko:K08169 - ko00000,ko02000 the major facilitator superfamily
PBHJGNOG_03351 6.68e-262 phnW 2.6.1.37 - E ko:K03430 ko00440,ko01100,ko01120,map00440,map01100,map01120 ko00000,ko00001,ko01000,ko01007 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily
PBHJGNOG_03352 5.14e-168 phnX 3.11.1.1 - S ko:K05306 ko00440,ko01100,ko01120,map00440,map01100,map01120 ko00000,ko00001,ko01000 Belongs to the HAD-like hydrolase superfamily. PhnX family
PBHJGNOG_03353 4.05e-93 rplO - - J ko:K02876 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 binds to the 23S rRNA
PBHJGNOG_03354 2.9e-31 rpmD - - J ko:K02907 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 50S ribosomal protein L30
PBHJGNOG_03355 1.83e-112 rpsE - - J ko:K02988 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PBHJGNOG_03356 4.05e-70 rplR - - J ko:K02881 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PBHJGNOG_03357 5.81e-131 rplF - - J ko:K02933 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PBHJGNOG_03358 1.74e-88 rpsH - - J ko:K02994 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PBHJGNOG_03359 3.88e-61 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PBHJGNOG_03360 8.57e-122 rplE - - J ko:K02931 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PBHJGNOG_03361 2.35e-67 rplX - - J ko:K02895 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PBHJGNOG_03364 6.48e-270 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_03365 2.97e-308 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03366 1.74e-136 mtnN 3.2.2.9 - F ko:K01243 ko00270,ko01100,ko01230,map00270,map01100,map01230 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_03367 1.38e-77 - - - S ko:K09790 - ko00000 Psort location CytoplasmicMembrane, score
PBHJGNOG_03368 3.33e-85 queD 4.1.2.50, 4.2.3.12 - H ko:K01737 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000,ko03016 Psort location Cytoplasmic, score
PBHJGNOG_03369 3.97e-112 - - - S ko:K07005 - ko00000 Pyridoxamine 5'-phosphate oxidase family protein
PBHJGNOG_03370 0.0 rnr - - J ko:K12573,ko:K12585 ko03018,map03018 ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PBHJGNOG_03372 2.11e-249 - 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 NAD dependent epimerase dehydratase family
PBHJGNOG_03373 9.79e-232 - - - I - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03374 9.51e-239 dus - - H - - - Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PBHJGNOG_03375 0.0 - - - K - - - Putative ATP-dependent DNA helicase recG C-terminal
PBHJGNOG_03376 4.48e-300 prtC - - O ko:K08303 ko05120,map05120 ko00000,ko00001,ko01000,ko01002 Psort location Cytoplasmic, score 8.96
PBHJGNOG_03377 5.15e-50 rsmI_1 2.1.1.198 - H ko:K07056 - ko00000,ko01000,ko03009 Psort location Cytoplasmic, score 8.96
PBHJGNOG_03378 8.23e-247 gldB - - O - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_03379 1.58e-203 fabI 1.3.1.10, 1.3.1.9 - I ko:K00208 ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Enoyl- acyl-carrier-protein reductase NADH
PBHJGNOG_03380 0.0 - - - P ko:K16089 - ko00000,ko02000 COG4771 Outer membrane receptor for ferrienterochelin and colicins
PBHJGNOG_03381 4.67e-71 - - - - - - - -
PBHJGNOG_03382 0.0 - - - P ko:K16089 - ko00000,ko02000 COG4771 Outer membrane receptor for ferrienterochelin and colicins
PBHJGNOG_03383 1.54e-135 - - - S - - - Bacteriocin-protection, YdeI or OmpD-Associated
PBHJGNOG_03384 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
PBHJGNOG_03385 2.24e-139 - - - K - - - Bacterial regulatory proteins, tetR family
PBHJGNOG_03386 0.0 - - - V ko:K06147 - ko00000,ko02000 COG1132 ABC-type multidrug transport system, ATPase and permease components
PBHJGNOG_03387 0.0 - - - V ko:K06147 - ko00000,ko02000 COG1132 ABC-type multidrug transport system, ATPase and permease components
PBHJGNOG_03388 3.13e-278 - - - C - - - radical SAM domain protein
PBHJGNOG_03389 3.07e-98 - - - - - - - -
PBHJGNOG_03391 0.0 ccsA - - O - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03392 1.5e-170 - - - - - - - -
PBHJGNOG_03393 5.52e-207 - - - S - - - COG NOG34575 non supervised orthologous group
PBHJGNOG_03394 1.56e-255 - 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PBHJGNOG_03395 0.0 dapE - - E - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_03396 2.83e-261 aroC 4.2.3.5 - E ko:K01736 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PBHJGNOG_03397 7.73e-110 - - - S - - - Calycin-like beta-barrel domain
PBHJGNOG_03398 1.64e-193 - - - S - - - COG NOG19137 non supervised orthologous group
PBHJGNOG_03399 8.17e-267 - - - S - - - non supervised orthologous group
PBHJGNOG_03400 4.18e-299 - - - S - - - Belongs to the UPF0597 family
PBHJGNOG_03401 4.57e-129 slyD 5.2.1.8 - G ko:K03775 - ko00000,ko01000,ko03110 Psort location Cytoplasmic, score
PBHJGNOG_03402 0.0 ilvD 4.2.1.9 - H ko:K01687 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the IlvD Edd family
PBHJGNOG_03403 0.0 ilvB 2.2.1.6 - H ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Acetolactate synthase, large subunit
PBHJGNOG_03404 1.87e-126 ilvN 2.2.1.6 - E ko:K01653 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 COG0440 Acetolactate synthase, small (regulatory) subunit
PBHJGNOG_03405 1.02e-180 - 3.1.2.21 - I ko:K01071 ko00061,ko01100,map00061,map01100 ko00000,ko00001,ko01000,ko01004 Acyl-ACP thioesterase
PBHJGNOG_03406 4.55e-253 ilvC 1.1.1.86 - E ko:K00053 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 ketol-acid reductoisomerase
PBHJGNOG_03407 0.0 - - - L - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_03408 0.0 acnA 4.2.1.3 - C ko:K01681 ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PBHJGNOG_03409 2.19e-291 icd 1.1.1.42 - C ko:K00031 ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146 br01601,ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PBHJGNOG_03410 0.0 prpC 2.3.3.1, 2.3.3.5 - C ko:K01647,ko:K01659 ko00020,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00640,map01100,map01110,map01120,map01130,map01200,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PBHJGNOG_03411 3.5e-11 - - - - - - - -
PBHJGNOG_03412 0.0 rhaB 2.7.1.5, 2.7.1.51 - G ko:K00848,ko:K00879 ko00040,ko00051,ko01120,map00040,map00051,map01120 ko00000,ko00001,ko01000 Involved in the catabolism of L-rhamnose (6-deoxy-L- mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate
PBHJGNOG_03413 1e-314 rhaA 5.3.1.14 - G ko:K01813 ko00051,ko01120,map00051,map01120 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_03414 9.91e-241 rhaT - - EG ko:K02856 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03415 4.03e-198 rhaD 4.1.2.19 - G ko:K01629 ko00040,ko00051,ko01120,map00040,map00051,map01120 ko00000,ko00001,ko01000 COG COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
PBHJGNOG_03416 2.78e-272 fucO 1.1.1.77 - C ko:K00048 ko00630,ko00640,ko01120,map00630,map00640,map01120 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PBHJGNOG_03417 3.63e-216 - - - K - - - Psort location Cytoplasmic, score 9.26
PBHJGNOG_03418 9.63e-85 - - - S - - - Domain of unknown function (DUF4890)
PBHJGNOG_03420 1.05e-59 - - - - - - - -
PBHJGNOG_03421 3.53e-34 - - - K - - - DNA-binding helix-turn-helix protein
PBHJGNOG_03430 4.16e-78 - - - L - - - Endodeoxyribonuclease RusA
PBHJGNOG_03431 6e-14 - - - - - - - -
PBHJGNOG_03433 4.4e-123 - 3.6.4.12 - L ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Participates in initiation and elongation during chromosome replication
PBHJGNOG_03434 9.34e-28 - - - - - - - -
PBHJGNOG_03435 3.31e-37 - - - - - - - -
PBHJGNOG_03436 3.17e-09 - - - S - - - Helix-turn-helix domain
PBHJGNOG_03438 1.26e-278 - - - L - - - Belongs to the 'phage' integrase family
PBHJGNOG_03439 0.0 - - - G - - - alpha-galactosidase
PBHJGNOG_03440 3.61e-315 - - - S - - - tetratricopeptide repeat
PBHJGNOG_03441 4.94e-82 - - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 COG0226 ABC-type phosphate transport system, periplasmic component
PBHJGNOG_03442 0.0 nanH 3.2.1.18 GH33 G ko:K01186 ko00511,ko00600,ko04142,map00511,map00600,map04142 ko00000,ko00001,ko01000,ko02042 BNR Asp-box repeat protein
PBHJGNOG_03443 0.0 - - - G - - - Glycosyl hydrolase family 20, catalytic domain
PBHJGNOG_03444 0.0 estS 3.1.1.53 - E ko:K05970 - ko00000,ko01000 Carbohydrate esterase, sialic acid-specific acetylesterase
PBHJGNOG_03445 0.0 - 3.2.1.25 - G ko:K01192 ko00511,ko04142,map00511,map04142 ko00000,ko00001,ko01000 Glycosyl hydrolase family 2, sugar binding domain protein
PBHJGNOG_03446 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain protein
PBHJGNOG_03447 0.0 nagZ3 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
PBHJGNOG_03448 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PBHJGNOG_03449 1.28e-136 - - - K - - - Transcription termination antitermination factor NusG
PBHJGNOG_03450 5.14e-214 rfbA 2.7.7.24 - H ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PBHJGNOG_03451 1.88e-136 rfbC 5.1.3.13 - G ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PBHJGNOG_03452 6.52e-212 rfbD 1.1.1.133 - M ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PBHJGNOG_03453 8.05e-283 rfbB 4.2.1.46 - M ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PBHJGNOG_03454 0.0 - - - V - - - COG NOG25117 non supervised orthologous group
PBHJGNOG_03455 1.54e-296 - - - C - - - coenzyme F420-reducing hydrogenase beta subunit
PBHJGNOG_03456 3.36e-273 - - - - - - - -
PBHJGNOG_03457 7.9e-312 - - - S - - - Polysaccharide pyruvyl transferase
PBHJGNOG_03458 4.85e-299 - - - M - - - Glycosyl transferases group 1
PBHJGNOG_03459 1.29e-181 - - - M - - - Bacterial transferase hexapeptide (six repeats)
PBHJGNOG_03460 1.34e-234 - - - M - - - Glycosyl transferase family 2
PBHJGNOG_03461 2.03e-249 - 2.7.1.168 - S ko:K07031 ko00540,map00540 ko00000,ko00001,ko01000 GHMP kinases C terminal
PBHJGNOG_03462 6.99e-136 gmhA 5.3.1.28 - G ko:K03271 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate
PBHJGNOG_03463 5.28e-177 gmhB 2.7.7.71 - JM ko:K15669 ko00540,map00540 ko00000,ko00001,ko01000 Nucleotidyl transferase
PBHJGNOG_03464 1.83e-111 gmhB 3.1.3.82, 3.1.3.83 - E ko:K03273 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01005 Polynucleotide kinase 3 phosphatase
PBHJGNOG_03465 2.89e-275 - - - M - - - Glycosyl transferases group 1
PBHJGNOG_03466 3.73e-201 - - - M ko:K07011 - ko00000 Glycosyltransferase like family 2
PBHJGNOG_03467 0.0 - 2.7.8.6 - M ko:K00996,ko:K03606 ko05111,map05111 ko00000,ko00001,ko01000,ko01005 Psort location CytoplasmicMembrane, score
PBHJGNOG_03468 6.56e-182 - - - M ko:K01991 ko02026,map02026 ko00000,ko00001,ko02000 COG1596 Periplasmic protein involved in polysaccharide export
PBHJGNOG_03469 0.0 - - - DM - - - Chain length determinant protein
PBHJGNOG_03470 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_03471 2.75e-269 manC 2.7.7.13 - M ko:K00971 ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110 ko00000,ko00001,ko00002,ko01000 mannose-1-phosphate guanylyltransferase
PBHJGNOG_03472 0.0 - - - IQ ko:K00666 - ko00000,ko01000,ko01004 Psort location Cytoplasmic, score 9.97
PBHJGNOG_03473 2.75e-130 - - - K - - - Psort location Cytoplasmic, score
PBHJGNOG_03474 1.68e-55 rpsO - - J ko:K02956 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PBHJGNOG_03475 0.0 typA - - T ko:K06207 - ko00000 GTP-binding protein TypA
PBHJGNOG_03476 1.24e-120 - - - P ko:K07240 - ko00000,ko02000 Psort location CytoplasmicMembrane, score
PBHJGNOG_03477 2.1e-122 - - - P ko:K07240 - ko00000,ko02000 Psort location CytoplasmicMembrane, score
PBHJGNOG_03479 2.11e-220 pafA - - P - - - type I phosphodiesterase nucleotide pyrophosphatase
PBHJGNOG_03480 0.0 glmM 5.4.2.8 - G ko:K01840 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_03481 1.84e-153 - - - S - - - COG NOG30041 non supervised orthologous group
PBHJGNOG_03482 1.05e-254 nrnA 3.1.13.3, 3.1.3.7 - S ko:K06881 ko00920,ko01100,ko01120,map00920,map01100,map01120 ko00000,ko00001,ko01000,ko03400 DHH family
PBHJGNOG_03483 0.0 comEC - - S ko:K02238 - ko00000,ko00002,ko02044 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03484 3.56e-152 rpe 5.1.3.1 - G ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_03485 1.26e-225 fmt 2.1.2.9 - J ko:K00604 ko00670,ko00970,map00670,map00970 ko00000,ko00001,ko01000 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PBHJGNOG_03486 0.0 clcB - - P ko:K03281 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03487 6.76e-88 rimN 2.7.7.87 - J ko:K07566 - ko00000,ko01000,ko03009,ko03016 Belongs to the SUA5 family
PBHJGNOG_03489 3.5e-70 - - - S - - - COG NOG19145 non supervised orthologous group
PBHJGNOG_03490 9.09e-282 pgl 3.1.1.31 - G ko:K07404 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 COG2706 3-carboxymuconate cyclase
PBHJGNOG_03491 0.0 - - - S - - - Tetratricopeptide repeat protein
PBHJGNOG_03492 2.71e-62 xylE - - P ko:K02100,ko:K03444,ko:K08138 - ko00000,ko02000 Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PBHJGNOG_03493 0.0 - - - G - - - Alpha-1,2-mannosidase
PBHJGNOG_03494 6.78e-103 rluC 5.4.99.23, 5.4.99.28, 5.4.99.29 - J ko:K06177,ko:K06180 - ko00000,ko01000,ko03009,ko03016 ribosomal pseudouridine synthase C, large subunit
PBHJGNOG_03495 4.6e-213 - - - P - - - COG COG3119 Arylsulfatase A and related enzymes
PBHJGNOG_03496 0.0 - - - S - - - PHP domain protein
PBHJGNOG_03497 2.69e-227 - 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
PBHJGNOG_03498 1.38e-287 - - - G - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03499 0.0 hepB - - S - - - Heparinase II III-like protein
PBHJGNOG_03500 2.96e-204 nfo 3.1.21.2 - L ko:K01151 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PBHJGNOG_03501 0.0 - - - P - - - ATP synthase F0, A subunit
PBHJGNOG_03502 4.34e-124 - - - - - - - -
PBHJGNOG_03503 8.01e-77 - - - - - - - -
PBHJGNOG_03504 1.19e-120 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PBHJGNOG_03505 3.11e-35 - - - S - - - COG NOG17973 non supervised orthologous group
PBHJGNOG_03506 0.0 - - - S - - - CarboxypepD_reg-like domain
PBHJGNOG_03507 3.3e-198 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PBHJGNOG_03508 3.5e-120 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PBHJGNOG_03509 1.93e-303 - - - S - - - CarboxypepD_reg-like domain
PBHJGNOG_03510 6.54e-102 - - - K - - - Acetyltransferase (GNAT) domain
PBHJGNOG_03511 1.66e-100 - - - - - - - -
PBHJGNOG_03512 3.55e-146 - - - S ko:K03975 - ko00000 Psort location CytoplasmicMembrane, score
PBHJGNOG_03513 7.46e-149 - - - P ko:K07220 - ko00000 COG1392 Phosphate transport regulator (distant homolog of PhoU)
PBHJGNOG_03514 9.75e-232 pitA - - P ko:K03306 - ko00000 Phosphate transporter family
PBHJGNOG_03515 1.29e-96 - - - MP ko:K06079 ko01503,map01503 ko00000,ko00001 COG NOG29769 non supervised orthologous group
PBHJGNOG_03516 2.09e-310 - 3.2.1.180 GH88 S ko:K18581 - ko00000,ko01000 Glycosyl Hydrolase Family 88
PBHJGNOG_03517 0.0 xynBA - - G - - - Belongs to the glycosyl hydrolase 43 family
PBHJGNOG_03518 1.45e-89 - - - S - - - COG NOG07966 non supervised orthologous group
PBHJGNOG_03519 8.1e-241 - - - S - - - COG NOG07966 non supervised orthologous group
PBHJGNOG_03520 0.0 - - - N - - - Bacterial group 2 Ig-like protein
PBHJGNOG_03521 0.0 gadB 4.1.1.15, 4.1.2.27 - E ko:K01580,ko:K01634 ko00250,ko00410,ko00430,ko00600,ko00650,ko01100,ko01110,ko01120,ko02024,ko04071,ko04727,ko04940,map00250,map00410,map00430,map00600,map00650,map01100,map01110,map01120,map02024,map04071,map04727,map04940 ko00000,ko00001,ko00002,ko01000 Belongs to the group II decarboxylase family
PBHJGNOG_03523 6.74e-117 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PBHJGNOG_03524 9.13e-282 - - - P - - - Transporter, major facilitator family protein
PBHJGNOG_03525 1.58e-209 - - - EG - - - COG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PBHJGNOG_03526 1.33e-87 hinT - - FG ko:K02503 - ko00000,ko04147 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family
PBHJGNOG_03527 5.65e-96 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PBHJGNOG_03528 3.26e-275 - - - O - - - COG NOG14454 non supervised orthologous group
PBHJGNOG_03529 0.0 pnp 2.7.7.8 - J ko:K00962 ko00230,ko00240,ko03018,map00230,map00240,map03018 ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
PBHJGNOG_03530 3.18e-97 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PBHJGNOG_03531 1.82e-227 - - - PT - - - Sigma factor regulatory protein, FecR PupR family
PBHJGNOG_03532 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_03533 0.0 - - - S - - - COG NOG26858 non supervised orthologous group
PBHJGNOG_03534 7.33e-191 - - - S - - - COG NOG11650 non supervised orthologous group
PBHJGNOG_03535 2.1e-134 - - - S - - - Domain of unknown function (DUF5034)
PBHJGNOG_03536 8.96e-222 - - - - - - - -
PBHJGNOG_03538 5.01e-227 - - - L - - - Phage integrase, N-terminal SAM-like domain
PBHJGNOG_03540 1.46e-242 - 3.2.1.99 GH43 G ko:K06113 - ko00000,ko01000 Belongs to the glycosyl hydrolase 43 family
PBHJGNOG_03541 0.0 - 3.2.1.55 GH51 G ko:K01209 ko00520,map00520 ko00000,ko00001,ko01000 Carbohydrate binding domain protein
PBHJGNOG_03542 7.26e-244 - - - G - - - Belongs to the glycosyl hydrolase 43 family
PBHJGNOG_03543 1.52e-285 galK 2.7.1.6 - H ko:K00849 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GHMP kinase family. GalK subfamily
PBHJGNOG_03544 6.78e-54 - - - P - - - TIGRFAM TonB-dependent outer membrane receptor, SusC RagA subfamily, signature region
PBHJGNOG_03545 0.0 - - - S - - - COG NOG25960 non supervised orthologous group
PBHJGNOG_03546 3.63e-269 - - - L - - - Reverse transcriptase (RNA-dependent DNA polymerase)
PBHJGNOG_03547 0.0 recD2_4 - - L - - - COG COG1112 Superfamily I DNA and RNA helicases and helicase subunits
PBHJGNOG_03548 0.0 - - - E - - - GDSL-like Lipase/Acylhydrolase family
PBHJGNOG_03549 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PBHJGNOG_03550 0.0 - - - G - - - Glycosyl hydrolase family 92
PBHJGNOG_03551 0.0 - 3.2.1.24 GH38 G ko:K01191 ko00511,map00511 ko00000,ko00001,ko01000,ko04131 Alpha mannosidase middle domain
PBHJGNOG_03552 1.3e-44 - - - - - - - -
PBHJGNOG_03553 9.82e-118 - - - K ko:K03088 - ko00000,ko03021 Bacterial regulatory proteins, luxR family
PBHJGNOG_03554 0.0 - - - S - - - Psort location
PBHJGNOG_03555 1.84e-87 - - - - - - - -
PBHJGNOG_03556 2.61e-76 nuoA 1.6.5.3 - C ko:K00330 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PBHJGNOG_03557 1.66e-143 nuoB 1.6.5.3 - C ko:K00331 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PBHJGNOG_03558 0.0 nuoC 1.6.5.3 - C ko:K00333,ko:K13378 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PBHJGNOG_03559 6.94e-262 nuoH 1.6.5.3 - C ko:K00337 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
PBHJGNOG_03560 1.01e-98 nuoI 1.6.5.3 - C ko:K00338 ko00190,ko01100,map00190,map01100 ko00000,ko00001,ko00002,ko01000 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
PBHJGNOG_03561 2.99e-68 - - - L - - - Helix-turn-helix domain
PBHJGNOG_03562 5.21e-55 - - - - - - - -
PBHJGNOG_03563 2.92e-66 - - - S - - - DNA binding domain, excisionase family
PBHJGNOG_03564 3.38e-83 - - - S - - - COG3943, virulence protein
PBHJGNOG_03565 2.24e-303 - - - L - - - Belongs to the 'phage' integrase family
PBHJGNOG_03566 1.96e-179 - - - S - - - hydrolases of the HAD superfamily
PBHJGNOG_03568 2.92e-70 - - - S - - - COG NOG30624 non supervised orthologous group
PBHJGNOG_03569 2.19e-130 ruvC 3.1.22.4 - L ko:K01159 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
PBHJGNOG_03570 0.0 pulA 3.2.1.41 CBM48,GH13 G ko:K01200 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 13 family
PBHJGNOG_03571 4.82e-109 - - - - - - - -
PBHJGNOG_03572 0.0 - - - E - - - GDSL-like protein
PBHJGNOG_03573 2.42e-284 yteR_10 - - G - - - unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
PBHJGNOG_03574 0.0 - - - G - - - candidate rhamnogalacturonan lyase, polysaccharide lyase family 11 protein K01238
PBHJGNOG_03575 0.0 yteR_9 - - E - - - Glycosyl Hydrolase Family 88
PBHJGNOG_03576 4.22e-74 rhaU 5.1.3.32 - G ko:K03534 - ko00000,ko01000 Involved in the anomeric conversion of L-rhamnose
PBHJGNOG_03577 0.0 - - - T - - - Response regulator receiver domain
PBHJGNOG_03578 0.0 - - - G - - - CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238
PBHJGNOG_03579 3.06e-181 - - - E - - - Carbohydrate esterase, sialic acid-specific acetylesterase
PBHJGNOG_03580 2.29e-192 - - - E - - - Carbohydrate esterase, sialic acid-specific acetylesterase
PBHJGNOG_03581 5.9e-290 - - - E - - - GDSL-like Lipase/Acylhydrolase family
PBHJGNOG_03582 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PBHJGNOG_03583 0.0 - - - T - - - Y_Y_Y domain
PBHJGNOG_03584 0.0 - - - S - - - Domain of unknown function
PBHJGNOG_03585 3.18e-155 - 3.1.3.18 - S ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 ko00000,ko00001,ko01000 HAD hydrolase, family IA, variant
PBHJGNOG_03586 0.0 xynB_10 - - G - - - Belongs to the glycosyl hydrolase 43 family
PBHJGNOG_03587 1.36e-308 - - - S - - - unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
PBHJGNOG_03588 0.0 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PBHJGNOG_03589 0.0 - 4.2.2.8 PL12 M ko:K19052 - ko00000,ko01000 Heparinase II III-like protein
PBHJGNOG_03590 0.0 - - - S - - - Glycosyl Hydrolase Family 88
PBHJGNOG_03591 7e-160 - 3.6.4.12 - L ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Participates in initiation and elongation during chromosome replication
PBHJGNOG_03593 3.63e-102 - - - L - - - DNA-binding protein
PBHJGNOG_03594 0.0 - - - GM ko:K21572 - ko00000,ko02000 Pfam:SusD
PBHJGNOG_03595 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_03596 2.95e-164 - - - S - - - Metalloenzyme superfamily
PBHJGNOG_03597 1.44e-117 rpoB 2.7.7.6 - K ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PBHJGNOG_03598 1.16e-304 - - - M ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_03599 4.14e-29 - - - G - - - IPT/TIG domain
PBHJGNOG_03600 2.38e-243 - - - G - - - Glycosyl hydrolases family 32
PBHJGNOG_03601 6.28e-180 - - - K - - - Periplasmic binding protein-like domain
PBHJGNOG_03602 3.15e-187 - - - EG - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03603 6.51e-122 frr - - J ko:K02838 - ko00000,ko03012 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PBHJGNOG_03604 7.4e-226 rsgA 3.1.3.100 - S ko:K06949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PBHJGNOG_03605 1.04e-154 - - - S - - - PKD-like family
PBHJGNOG_03606 2.11e-86 - - - S - - - Domain of unknown function (DUF4843)
PBHJGNOG_03607 4.69e-187 - - - S ko:K21572 - ko00000,ko02000 Starch-binding associating with outer membrane
PBHJGNOG_03608 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_03609 0.0 - - - N ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
PBHJGNOG_03610 3.25e-223 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
PBHJGNOG_03611 0.0 - - - N ko:K01992 - ko00000,ko00002,ko02000 ABC-type uncharacterized transport system
PBHJGNOG_03612 2.12e-226 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
PBHJGNOG_03613 2.1e-248 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PBHJGNOG_03614 0.0 bepE_4 - - V ko:K03296,ko:K18138 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PBHJGNOG_03615 1.18e-310 tolC - - MU - - - Psort location OuterMembrane, score
PBHJGNOG_03616 7.06e-274 pelA 3.1.1.11 - G ko:K01051 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 pectate lyase
PBHJGNOG_03617 5.94e-284 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03618 0.0 fumB 4.2.1.2 - C ko:K01676 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible hydration of fumarate to (S)- malate
PBHJGNOG_03619 3.39e-239 - - - JM - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_03620 0.0 cobN 6.6.1.2 - H ko:K02230 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko01000 COG1429 Cobalamin biosynthesis protein CobN and related
PBHJGNOG_03621 2.11e-157 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03622 2.6e-135 - - - U - - - Psort location CytoplasmicMembrane, score 9.46
PBHJGNOG_03623 1.76e-68 - - - S - - - Conserved protein
PBHJGNOG_03624 1.19e-50 - - - - - - - -
PBHJGNOG_03626 1.11e-163 eda 4.1.2.14, 4.1.3.42 - G ko:K01625 ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 KDPG and KHG aldolase
PBHJGNOG_03627 1.95e-248 - 2.7.1.45 - G ko:K00874 ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Kinase, PfkB family
PBHJGNOG_03628 1.98e-259 - - - K ko:K02529 - ko00000,ko03000 Psort location Cytoplasmic, score
PBHJGNOG_03629 0.0 uxaA 4.2.1.42, 4.2.1.7 - G ko:K01685,ko:K01708 ko00040,ko00053,ko01100,map00040,map00053,map01100 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_03630 0.0 - - - P - - - TonB-dependent Receptor Plug Domain
PBHJGNOG_03631 0.0 - - - EGP - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03632 1.1e-226 - - - V ko:K03543 - ko00000,ko00002,ko02000 Auxiliary transport protein, membrane fusion protein (MFP) family protein
PBHJGNOG_03633 4.72e-301 - - - MU - - - Psort location OuterMembrane, score
PBHJGNOG_03634 4.75e-96 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
PBHJGNOG_03635 1.3e-161 - 3.2.1.3 GH15 G ko:K01178 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Domain of unknown function (DUF5127)
PBHJGNOG_03636 6.59e-129 - 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
PBHJGNOG_03640 1.66e-273 - - - M - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03641 1.27e-250 - - - M - - - Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PBHJGNOG_03642 0.0 - - - V - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PBHJGNOG_03643 0.0 - - - MU - - - Psort location OuterMembrane, score
PBHJGNOG_03644 0.0 - - - V - - - Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PBHJGNOG_03645 1.89e-129 - - - S - - - Flavodoxin-like fold
PBHJGNOG_03646 4.18e-285 nspC 4.1.1.96 - E ko:K13747 ko00330,ko01100,map00330,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_03647 0.0 - - - H - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_03648 0.0 - 3.2.1.50 - G ko:K01205 ko00531,ko01100,ko04142,map00531,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko04147 Alpha-N-acetylglucosaminidase
PBHJGNOG_03649 1.05e-316 ce 5.1.3.8 - G ko:K01787 ko00520,map00520 ko00000,ko00001,ko01000 COG COG2942 N-acyl-D-glucosamine 2-epimerase
PBHJGNOG_03650 1.7e-224 kdpD 2.7.13.3 - T ko:K07646 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Psort location Cytoplasmic, score 8.96
PBHJGNOG_03651 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBHJGNOG_03652 0.0 - - - P ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_03653 0.0 - - - H - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_03654 0.0 - - - S - - - Domain of unknown function (DUF1735)
PBHJGNOG_03655 0.0 - - - A - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_03656 3.77e-267 mgtE - - P ko:K06213 - ko00000,ko02000 Acts as a magnesium transporter
PBHJGNOG_03657 8.38e-190 ksgA 2.1.1.182 - J ko:K02528 - ko00000,ko01000,ko03009 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PBHJGNOG_03658 9.93e-235 - - - S ko:K07027 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03659 0.0 pepD_2 - - E ko:K01270 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 Xaa-His dipeptidase
PBHJGNOG_03661 0.0 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_03662 0.0 - - - S - - - COG2373 Large extracellular alpha-helical protein
PBHJGNOG_03663 5.99e-266 - - - S - - - COG NOG19146 non supervised orthologous group
PBHJGNOG_03664 6.15e-259 argK - - E ko:K07588 - ko00000,ko01000 Lao Ao transport system ATPase
PBHJGNOG_03665 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 beta-galactosidase
PBHJGNOG_03666 6.93e-208 - - - EG - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03667 3.19e-202 - - - P - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_03668 6.14e-238 - - - P - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_03669 5.4e-309 ybdG_2 - - M ko:K16053 - ko00000,ko02000 Psort location CytoplasmicMembrane, score
PBHJGNOG_03670 6.5e-214 - - - K - - - Transcriptional regulator, AraC family
PBHJGNOG_03671 0.0 ppk 2.7.4.1 - H ko:K00937 ko00190,ko03018,map00190,map03018 ko00000,ko00001,ko01000,ko03019 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PBHJGNOG_03672 4.26e-118 - - - S ko:K07095 - ko00000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_03673 9.94e-210 rfbA 2.7.7.24 - H ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PBHJGNOG_03674 1.4e-287 rfbB 4.2.1.46 - M ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PBHJGNOG_03675 2.06e-203 menA 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the MenA family. Type 1 subfamily
PBHJGNOG_03676 3.8e-251 - - - S ko:K07098 - ko00000 Ser Thr phosphatase family protein
PBHJGNOG_03678 2.57e-309 - - - S ko:K07133 - ko00000 ATPase (AAA superfamily)
PBHJGNOG_03679 5.55e-149 nadD 2.7.7.18 - H ko:K00969 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PBHJGNOG_03680 5.19e-50 - - - - - - - -
PBHJGNOG_03681 5.96e-132 gmk 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Essential for recycling GMP and indirectly, cGMP
PBHJGNOG_03682 1.59e-185 - - - S - - - stress-induced protein
PBHJGNOG_03683 6.13e-165 yeaZ - - O ko:K14742 - ko00000,ko03016 Universal bacterial protein YeaZ
PBHJGNOG_03684 1.12e-149 - - - S - - - COG NOG11645 non supervised orthologous group
PBHJGNOG_03685 7.52e-85 - - - C ko:K18929 - ko00000 electron transport protein YkgF
PBHJGNOG_03686 4.75e-132 lutC - - S ko:K00782 - ko00000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_03687 3.34e-212 pdxK 2.7.1.35 - H ko:K00868 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko01000 Pyridoxal kinase
PBHJGNOG_03688 8.72e-279 - - - S ko:K07148 - ko00000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03689 1.17e-267 - - - M - - - Carboxypeptidase regulatory-like domain
PBHJGNOG_03690 3.32e-77 - - - S ko:K09793 - ko00000 Psort location CytoplasmicMembrane, score 9.46
PBHJGNOG_03691 0.0 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_03692 0.0 ravA_1 - - S ko:K03924 - ko00000,ko01000 ATPase family associated with various cellular activities (AAA)
PBHJGNOG_03693 1.77e-61 - - - S - - - TPR repeat
PBHJGNOG_03694 3.12e-38 oorD 1.2.7.3 - C ko:K00176 ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200 br01601,ko00000,ko00001,ko00002,ko01000 4Fe-4S binding domain protein
PBHJGNOG_03695 1.88e-251 vorB 1.2.7.11, 1.2.7.3 - C ko:K00174 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 COG0674 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin
PBHJGNOG_03696 1.44e-31 - - - - - - - -
PBHJGNOG_03697 3.43e-187 vorA 1.2.7.11, 1.2.7.3 - C ko:K00175 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
PBHJGNOG_03698 5.23e-125 porG 1.2.7.3 - C ko:K00177 ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200 br01601,ko00000,ko00001,ko00002,ko01000 2-oxoacid ferredoxin flavodoxin oxidoreductase, gamma subunit
PBHJGNOG_03699 0.0 - - - H - - - COG NOG07963 non supervised orthologous group
PBHJGNOG_03700 4.16e-196 - - - ET - - - COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain
PBHJGNOG_03701 2.36e-268 ykfB 5.1.1.20, 5.1.1.3 - M ko:K01776,ko:K19802 ko00471,ko01100,map00471,map01100 ko00000,ko00001,ko01000,ko01011 Belongs to the mandelate racemase muconate lactonizing enzyme family
PBHJGNOG_03702 2.72e-237 ykfC - - M - - - NlpC P60 family protein
PBHJGNOG_03703 1.46e-279 - - - G - - - pectate lyase K01728
PBHJGNOG_03704 0.0 - - - M - - - Belongs to the glycosyl hydrolase 28 family
PBHJGNOG_03705 6.05e-121 - - - K - - - Sigma-70, region 4
PBHJGNOG_03706 1.75e-52 - - - - - - - -
PBHJGNOG_03707 2.66e-289 - - - G - - - Major Facilitator Superfamily
PBHJGNOG_03708 6.26e-170 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PBHJGNOG_03709 4.96e-113 - - - S - - - Threonine/Serine exporter, ThrE
PBHJGNOG_03710 1.19e-172 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03711 1.02e-191 vdlC - - S - - - COG COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PBHJGNOG_03712 3.05e-191 - - - S - - - Domain of unknown function (4846)
PBHJGNOG_03713 0.0 - - - L - - - Protein of unknown function (DUF3987)
PBHJGNOG_03715 3.38e-50 - - - S - - - Domain of unknown function (DUF4248)
PBHJGNOG_03716 2.2e-191 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_03717 0.0 - - - M - - - Protein of unknown function (DUF3078)
PBHJGNOG_03718 2.3e-184 - - - L - - - COG NOG19076 non supervised orthologous group
PBHJGNOG_03719 1.04e-82 - - - S - - - WYL_2, Sm-like SH3 beta-barrel fold
PBHJGNOG_03720 1.08e-87 - - - S - - - Domain of unknown function, B. Theta Gene description (DUF4119)
PBHJGNOG_03721 6.64e-233 - - - L - - - COG NOG21178 non supervised orthologous group
PBHJGNOG_03722 0.0 amyA2 - - G - - - Alpha amylase, catalytic domain
PBHJGNOG_03723 2.16e-197 - - - S ko:K07001 - ko00000 esterase of the alpha-beta hydrolase superfamily
PBHJGNOG_03724 0.0 yccM_2 - - C - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_03725 4.83e-227 - - - S - - - Tat pathway signal sequence domain protein
PBHJGNOG_03726 2.82e-111 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PBHJGNOG_03727 4.93e-212 - 2.7.4.1 - S ko:K22468 ko00190,ko03018,map00190,map03018 ko00000,ko00001,ko01000,ko03019 Polyphosphate kinase 2 (PPK2)
PBHJGNOG_03728 4.02e-60 - - - - - - - -
PBHJGNOG_03729 3.75e-119 - - - J - - - Acetyltransferase (GNAT) domain
PBHJGNOG_03730 1.83e-175 - - - J - - - Psort location Cytoplasmic, score
PBHJGNOG_03731 3.32e-41 - - - - - - - -
PBHJGNOG_03733 7.23e-51 - - - S - - - COG COG0724 RNA-binding proteins (RRM domain)
PBHJGNOG_03734 3.92e-74 - - - S ko:K07001 - ko00000 Phospholipase, patatin family
PBHJGNOG_03735 0.0 glnA 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 Glutamate--ammonia ligase, catalytic domain protein
PBHJGNOG_03736 3.72e-29 - - - - - - - -
PBHJGNOG_03737 5.65e-170 - - - S - - - Domain of unknown function (DUF4396)
PBHJGNOG_03738 3.39e-194 sucD 6.2.1.5 - C ko:K01902 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
PBHJGNOG_03739 4.02e-261 sucC 6.2.1.5 - F ko:K01903 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
PBHJGNOG_03740 7.85e-209 fabD 2.3.1.39 - I ko:K00645 ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 malonyl CoA-acyl carrier protein transacylase
PBHJGNOG_03741 8.33e-191 thiD 2.7.1.49, 2.7.4.7 - H ko:K00941 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 COG0351 Hydroxymethylpyrimidine phosphomethylpyrimidine kinase
PBHJGNOG_03742 1.03e-171 - - - F - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_03743 0.0 xylB_2 2.7.1.17 - G ko:K00854 ko00040,ko01100,map00040,map01100 ko00000,ko00001,ko00002,ko01000 Carbohydrate kinase, FGGY family protein
PBHJGNOG_03744 0.0 xylA 5.3.1.5 - G ko:K01805 ko00040,ko00051,ko01100,map00040,map00051,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PBHJGNOG_03745 0.0 - - - P ko:K08138 - ko00000,ko02000 Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PBHJGNOG_03746 1.48e-125 - - - L - - - Arm DNA-binding domain
PBHJGNOG_03748 1.43e-46 - - - - - - - -
PBHJGNOG_03749 2.34e-87 - - - S - - - Immunity protein 12
PBHJGNOG_03753 6.51e-95 - - - S - - - Immunity protein 68
PBHJGNOG_03754 3.02e-35 - - - - - - - -
PBHJGNOG_03755 2.77e-104 - - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_03756 3.94e-163 exbB - - U ko:K03561 - ko00000,ko02000 MotA TolQ ExbB proton channel family
PBHJGNOG_03757 6.98e-104 dtd - - J ko:K07560 - ko00000,ko01000,ko03016 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PBHJGNOG_03758 5.37e-74 ypjD - - S - - - MazG nucleotide pyrophosphohydrolase domain
PBHJGNOG_03759 3.46e-210 deoC 4.1.2.4 - H ko:K01619 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PBHJGNOG_03760 1.24e-166 - - - S - - - Protein of unknown function (DUF1266)
PBHJGNOG_03761 5.18e-224 ispB 2.5.1.90 - H ko:K02523 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Belongs to the FPP GGPP synthase family
PBHJGNOG_03762 0.0 polA 2.7.7.7 - L ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 ko00000,ko00001,ko01000,ko03032,ko03400 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PBHJGNOG_03763 1.74e-88 - - - S - - - COG NOG29882 non supervised orthologous group
PBHJGNOG_03764 3.23e-174 - - - T ko:K02477 - ko00000,ko02022 COG3279 Response regulator of the LytR AlgR family
PBHJGNOG_03765 0.0 - - - T - - - Histidine kinase
PBHJGNOG_03766 6.78e-217 cysE 2.3.1.30 - E ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score 9.97
PBHJGNOG_03767 8.63e-302 rlmL - - L ko:K07444 - ko00000,ko01000 Belongs to the methyltransferase superfamily
PBHJGNOG_03768 0.0 pepX2 3.4.14.5 - E ko:K01278 ko04974,map04974 ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 Peptidase, S9A B C family, catalytic domain protein
PBHJGNOG_03769 3.98e-279 - - - N - - - domain, Protein
PBHJGNOG_03770 0.0 - - - M - - - Glycosyl hydrolase family 30 TIM-barrel domain
PBHJGNOG_03771 0.0 - - - M - - - TonB-dependent receptor
PBHJGNOG_03772 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_03773 0.0 - - - S - - - Susd and RagB outer membrane lipoprotein
PBHJGNOG_03774 4.82e-281 - - - G - - - Putative glycoside hydrolase Family 18, chitinase_18
PBHJGNOG_03775 1.59e-290 - - - S - - - Concanavalin A-like lectin/glucanases superfamily
PBHJGNOG_03776 0.0 gadC - - E ko:K20265 ko02024,map02024 ko00000,ko00001,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03777 2.55e-288 - - - T - - - Histidine kinase-like ATPases
PBHJGNOG_03778 9.48e-147 macB_3 - - V ko:K02004 - ko00000,ko00002,ko02000 Efflux ABC transporter, permease protein
PBHJGNOG_03779 1.07e-244 - - - M ko:K02005 - ko00000 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PBHJGNOG_03780 6.09e-190 - - - MU ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 Psort location OuterMembrane, score 10.00
PBHJGNOG_03781 1.96e-253 msrA 1.8.4.11, 1.8.4.12 - O ko:K07304,ko:K12267 - ko00000,ko01000 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PBHJGNOG_03782 2.73e-123 - - - S - - - COG NOG29882 non supervised orthologous group
PBHJGNOG_03783 0.0 pbpF - - M - - - Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
PBHJGNOG_03784 1.69e-152 - - - S - - - COG NOG36047 non supervised orthologous group
PBHJGNOG_03785 1.7e-236 - - - J - - - Domain of unknown function (DUF4476)
PBHJGNOG_03786 6.64e-162 - - - J - - - Domain of unknown function (DUF4476)
PBHJGNOG_03787 3.32e-202 yitL - - S ko:K00243 - ko00000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_03788 0.0 nqrA 1.6.5.8 - C ko:K00346 - ko00000,ko01000 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PBHJGNOG_03789 0.0 pepC 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
PBHJGNOG_03790 6.87e-306 - - - M - - - COG NOG26016 non supervised orthologous group
PBHJGNOG_03791 6.67e-107 - - - K - - - COG NOG19120 non supervised orthologous group
PBHJGNOG_03792 6.03e-67 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_03793 1.05e-175 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03794 2.52e-146 - - - C - - - Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term
PBHJGNOG_03795 4.31e-87 - - - S - - - slime layer polysaccharide biosynthetic process
PBHJGNOG_03796 7.57e-147 - - - M - - - Glycosyl transferases group 1
PBHJGNOG_03798 2.78e-91 rfaG - - M - - - Glycosyltransferase like family 2
PBHJGNOG_03799 7.19e-121 - - - M - - - Glycosyltransferase Family 4
PBHJGNOG_03800 6.1e-119 - - GT4 M ko:K13004 - ko00000,ko01000,ko01003,ko01005 Glycosyltransferase, group 1 family protein
PBHJGNOG_03802 9.55e-210 tagO - - M - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03803 1.5e-170 - - - M ko:K01991 ko02026,map02026 ko00000,ko00001,ko02000 COG1596 Periplasmic protein involved in polysaccharide export
PBHJGNOG_03804 0.0 - - - DM - - - Chain length determinant protein
PBHJGNOG_03805 4.95e-63 - - - S ko:K07075 - ko00000 Nucleotidyltransferase domain
PBHJGNOG_03806 2.78e-58 rplI - - J ko:K02939 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 binds to the 23S rRNA
PBHJGNOG_03807 0.0 - - - G - - - Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
PBHJGNOG_03808 8.07e-284 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_03809 1.04e-306 - - - - - - - -
PBHJGNOG_03810 2.2e-223 - - GT2 M ko:K20534 - ko00000,ko01000,ko01005,ko02000 Glycosyltransferase, group 2 family protein
PBHJGNOG_03811 2.15e-82 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PBHJGNOG_03812 1.4e-236 - - - S - - - Core-2/I-Branching enzyme
PBHJGNOG_03813 3.5e-272 vioA 2.6.1.33 - E ko:K20429 - ko00000,ko01000 Belongs to the DegT DnrJ EryC1 family
PBHJGNOG_03814 3.53e-276 - - - E ko:K10907 - ko00000,ko01000,ko01007 Aminotransferase class-V
PBHJGNOG_03815 6.71e-285 - - - F - - - ATP-grasp domain
PBHJGNOG_03816 1.6e-103 - 2.3.1.128 - K ko:K03789 - ko00000,ko01000,ko03009 acetyltransferase
PBHJGNOG_03817 5.49e-236 - - - M - - - Glycosyltransferase, group 2 family
PBHJGNOG_03819 3.44e-70 - - - S - - - MAC/Perforin domain
PBHJGNOG_03820 2.94e-235 - - - S - - - Glycosyltransferase, group 2 family protein
PBHJGNOG_03821 5.94e-237 - - - S - - - Glycosyltransferase, group 2 family protein
PBHJGNOG_03822 8.2e-82 - - - G - - - COG NOG09951 non supervised orthologous group
PBHJGNOG_03823 0.0 - - - S - - - IPT TIG domain protein
PBHJGNOG_03824 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_03825 0.0 - - - P ko:K21572 - ko00000,ko02000 Psort location OuterMembrane, score
PBHJGNOG_03826 1.5e-254 - - - S - - - Domain of unknown function (DUF4361)
PBHJGNOG_03827 0.0 - - - P - - - COG COG3119 Arylsulfatase A and related enzymes
PBHJGNOG_03828 0.0 - 3.1.6.1 - P ko:K01130 ko00140,ko00600,map00140,map00600 ko00000,ko00001,ko01000 COG COG3119 Arylsulfatase A and related enzymes
PBHJGNOG_03829 0.0 - 3.1.6.1 - P ko:K01130 ko00140,ko00600,map00140,map00600 ko00000,ko00001,ko01000 COG COG3119 Arylsulfatase A and related enzymes
PBHJGNOG_03830 0.0 - - - P - - - Sulfatase
PBHJGNOG_03831 0.0 - - - S ko:K06921 - ko00000 ATPase (AAA superfamily)
PBHJGNOG_03832 1.19e-235 bioF 2.3.1.29, 2.3.1.47 - E ko:K00639,ko:K00652 ko00260,ko00780,ko01100,map00260,map00780,map01100 ko00000,ko00001,ko00002,ko01000,ko01007 Beta-eliminating lyase
PBHJGNOG_03833 5.73e-75 - - - S - - - Lipocalin-like
PBHJGNOG_03834 1.62e-79 - - - - - - - -
PBHJGNOG_03835 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_03836 0.0 - - - P ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_03837 0.0 - - - M - - - F5/8 type C domain
PBHJGNOG_03838 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
PBHJGNOG_03839 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03840 1.59e-276 - - - V - - - MacB-like periplasmic core domain
PBHJGNOG_03841 0.0 - - - V - - - COG NOG11095 non supervised orthologous group
PBHJGNOG_03842 1.96e-22 - - - S - - - Protein of unknown function (DUF1016)
PBHJGNOG_03843 0.0 - - - S - - - Purple acid Phosphatase, N-terminal domain
PBHJGNOG_03844 1.16e-286 - - - S - - - protein conserved in bacteria
PBHJGNOG_03845 3.42e-129 - - - H ko:K06950 - ko00000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_03846 0.0 - - - M - - - Psort location OuterMembrane, score 9.49
PBHJGNOG_03847 7.52e-165 ung 3.2.2.27 - L ko:K03648 ko03410,ko05340,map03410,map05340 ko00000,ko00001,ko01000,ko03400 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PBHJGNOG_03848 5.22e-255 asnA 6.3.1.1 - E ko:K01914 ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 10.00
PBHJGNOG_03850 0.0 fkp - - S - - - GHMP kinase, N-terminal domain protein
PBHJGNOG_03851 4.68e-161 yfbT - - S - - - HAD hydrolase, family IA, variant 3
PBHJGNOG_03852 1.38e-184 - - - - - - - -
PBHJGNOG_03853 9.87e-112 - - - S - - - Domain of unknown function (DUF5035)
PBHJGNOG_03854 0.0 pgi 5.3.1.9 - G ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GPI family
PBHJGNOG_03855 1.38e-250 gpsA 1.1.1.94 - I ko:K00057 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 Glycerol-3-phosphate dehydrogenase
PBHJGNOG_03856 0.0 lysS 6.1.1.6 - J ko:K04567 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family
PBHJGNOG_03857 1.42e-267 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PBHJGNOG_03858 5.55e-137 - - - G - - - Domain of unknown function (DUF4450)
PBHJGNOG_03859 2.96e-210 - - - S - - - Domain of unknown function (DUF4361)
PBHJGNOG_03860 0.0 - - - P ko:K21572 - ko00000,ko02000 Psort location OuterMembrane, score
PBHJGNOG_03861 0.0 - - - P - - - TonB dependent receptor
PBHJGNOG_03862 0.0 - - - S - - - NHL repeat
PBHJGNOG_03863 0.0 - - - T - - - Y_Y_Y domain
PBHJGNOG_03864 0.0 - - - P ko:K02014 - ko00000,ko02000 COG COG1629 Outer membrane receptor proteins, mostly Fe transport
PBHJGNOG_03865 2.32e-205 mscS - - M ko:K03442 - ko00000,ko02000 Small-conductance mechanosensitive channel
PBHJGNOG_03866 7.33e-50 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_03867 8.28e-310 metY 2.5.1.49 - E ko:K01740 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PBHJGNOG_03868 2.81e-106 lrp - - K ko:K03719,ko:K05800 - ko00000,ko03000,ko03036 Transcriptional regulator, AsnC family
PBHJGNOG_03869 1.41e-208 - 2.1.1.266 - S ko:K07115 - ko00000,ko01000,ko03009 COG COG2961 Protein involved in catabolism of external DNA
PBHJGNOG_03870 3.72e-145 vat_2 - - S ko:K18234 - ko00000,ko01000,ko01504 Bacterial transferase hexapeptide repeat protein
PBHJGNOG_03871 3.27e-138 - - - S - - - Bacterial transferase hexapeptide (six repeats)
PBHJGNOG_03872 0.0 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PBHJGNOG_03873 1.76e-312 mepA_6 - - V - - - MATE efflux family protein
PBHJGNOG_03874 1.58e-215 - - - K - - - FR47-like protein
PBHJGNOG_03875 2.24e-106 - - - S - - - Protein of unknown function (DUF3795)
PBHJGNOG_03876 4.69e-43 - - - - - - - -
PBHJGNOG_03879 2.23e-299 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
PBHJGNOG_03880 1.86e-96 - - - K - - - Protein of unknown function (DUF3788)
PBHJGNOG_03881 0.0 - - - E - - - Domain of Unknown Function with PDB structure (DUF3857)
PBHJGNOG_03882 0.0 - - - E - - - Domain of Unknown Function with PDB structure (DUF3858)
PBHJGNOG_03883 2.06e-108 - - - K - - - acetyltransferase
PBHJGNOG_03884 5.02e-141 - - - O - - - Heat shock protein
PBHJGNOG_03885 6.82e-115 - - - K - - - LytTr DNA-binding domain
PBHJGNOG_03886 1.49e-166 - - - T - - - Histidine kinase
PBHJGNOG_03887 3.51e-188 - - - M ko:K03585 ko01501,ko01503,map01501,map01503 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PBHJGNOG_03888 0.0 - - - V ko:K03296 - ko00000 AcrB/AcrD/AcrF family
PBHJGNOG_03889 2e-224 - - - MU - - - Efflux transporter, outer membrane factor
PBHJGNOG_03890 1.42e-47 - - - S - - - Winged helix-turn-helix domain (DUF2582)
PBHJGNOG_03891 3.57e-283 - - - I - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_03892 2.47e-131 - - - T - - - Cyclic nucleotide-binding domain protein
PBHJGNOG_03893 0.0 - - - E ko:K21572 - ko00000,ko02000 Pfam:SusD
PBHJGNOG_03894 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_03895 0.0 - - - E ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_03896 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_03897 2e-67 - - - K - - - Helix-turn-helix domain
PBHJGNOG_03898 4.1e-69 - - - K - - - Helix-turn-helix domain
PBHJGNOG_03899 0.0 - - - - - - - -
PBHJGNOG_03900 6.89e-81 - - - - - - - -
PBHJGNOG_03901 9.72e-166 - - - K - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_03902 1.27e-106 - - - - - - - -
PBHJGNOG_03903 1.54e-35 - 1.1.1.193, 1.1.1.302, 3.5.4.26 - H ko:K11752,ko:K14654 ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024 ko00000,ko00001,ko00002,ko01000 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PBHJGNOG_03904 6.08e-33 - - - S - - - DJ-1/PfpI family
PBHJGNOG_03905 9.46e-159 - - - C - - - Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PBHJGNOG_03906 4.27e-102 - - - S - - - CAAX protease self-immunity
PBHJGNOG_03907 1.68e-122 - 2.7.8.5 - I ko:K00995 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 CDP-alcohol phosphatidyltransferase
PBHJGNOG_03908 2.97e-109 - - - E - - - Acetyltransferase (GNAT) domain
PBHJGNOG_03909 8.66e-87 - - - - - - - -
PBHJGNOG_03910 4.65e-186 - - - K - - - Helix-turn-helix domain
PBHJGNOG_03911 7.62e-219 - - - E - - - Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
PBHJGNOG_03912 1.13e-58 - - - S ko:K07343 - ko00000 TfoX C-terminal domain
PBHJGNOG_03913 5.13e-268 trpS 6.1.1.2 - J ko:K01867 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
PBHJGNOG_03914 0.0 - - - S - - - Predicted membrane protein (DUF2339)
PBHJGNOG_03915 8.17e-286 - - - M - - - Psort location OuterMembrane, score
PBHJGNOG_03916 0.0 mutL - - L ko:K03572 ko03430,map03430 ko00000,ko00001,ko03400 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PBHJGNOG_03917 1.34e-66 - - - S - - - COG NOG23401 non supervised orthologous group
PBHJGNOG_03918 0.0 lptD - - M - - - COG NOG06415 non supervised orthologous group
PBHJGNOG_03919 0.0 surA 5.2.1.8 - M ko:K03771 - ko00000,ko01000,ko03110 peptidylprolyl isomerase
PBHJGNOG_03920 9.89e-201 - - - O - - - COG NOG23400 non supervised orthologous group
PBHJGNOG_03921 0.0 - 5.2.1.8 - M ko:K03771 - ko00000,ko01000,ko03110 COG COG0760 Parvulin-like peptidyl-prolyl isomerase
PBHJGNOG_03922 0.0 guaB 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
PBHJGNOG_03923 5.74e-266 recQ 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
PBHJGNOG_03924 4.72e-87 - - - - - - - -
PBHJGNOG_03925 8.59e-104 - - - - - - - -
PBHJGNOG_03926 7e-268 gcvT 2.1.2.10 - H ko:K00605 ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200 ko00000,ko00001,ko00002,ko01000 The glycine cleavage system catalyzes the degradation of glycine
PBHJGNOG_03927 9.75e-296 pepT 3.4.11.4 - E ko:K01258 - ko00000,ko01000,ko01002 Cleaves the N-terminal amino acid of tripeptides
PBHJGNOG_03928 0.0 purF 2.4.2.14 - F ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 glutamine phosphoribosylpyrophosphate amidotransferase
PBHJGNOG_03929 0.0 susB 3.2.1.20, 3.2.1.3 GH31,GH97 G ko:K01187,ko:K21574 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 COG NOG06228 non supervised orthologous group
PBHJGNOG_03930 9.45e-197 - - - M - - - Peptidase family M23
PBHJGNOG_03931 7.76e-186 - - - - - - - -
PBHJGNOG_03932 3.2e-83 crcB - - D ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PBHJGNOG_03933 5.45e-49 - - - S - - - Pentapeptide repeat protein
PBHJGNOG_03934 9.24e-306 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PBHJGNOG_03935 7.36e-126 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PBHJGNOG_03936 1.65e-88 - - - - - - - -
PBHJGNOG_03937 8.06e-258 - - - - - - - -
PBHJGNOG_03938 3.4e-200 atpG - - C ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PBHJGNOG_03939 0.0 atpA 3.6.3.14 - C ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PBHJGNOG_03940 4.59e-216 - - - M - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_03941 0.0 - - - S - - - Fibronectin type III domain
PBHJGNOG_03942 0.0 - - - GM ko:K21572 - ko00000,ko02000 Pfam:SusD
PBHJGNOG_03943 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_03944 1.01e-225 - - - PT - - - Domain of unknown function (DUF4974)
PBHJGNOG_03945 5.09e-135 - - - K ko:K03088 - ko00000,ko03021 Sigma-70, region 4
PBHJGNOG_03946 2.32e-175 - - - S ko:K06911 - ko00000 Belongs to the pirin family
PBHJGNOG_03947 0.0 dsbD 1.8.1.8 - CO ko:K04084 - ko00000,ko01000,ko03110 cytochrome c biogenesis protein transmembrane region
PBHJGNOG_03948 2.43e-64 - - - S - - - Stress responsive A B barrel domain protein
PBHJGNOG_03949 3.19e-145 udk 2.7.1.48 - F ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PBHJGNOG_03950 0.0 mltF - - M ko:K18691 - ko00000,ko01000,ko01011 soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein
PBHJGNOG_03951 0.0 - - - E ko:K03307 - ko00000 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PBHJGNOG_03952 2.44e-25 - - - - - - - -
PBHJGNOG_03953 3.08e-140 - - - C - - - COG0778 Nitroreductase
PBHJGNOG_03954 0.0 metH 2.1.1.13 - E ko:K00548 ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PBHJGNOG_03955 7.84e-101 smpB - - J ko:K03664 - ko00000 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PBHJGNOG_03956 9.36e-124 - - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_03957 5.84e-183 - - - S - - - COG NOG34011 non supervised orthologous group
PBHJGNOG_03958 3.34e-112 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_03959 2.74e-154 frdB 1.3.5.1, 1.3.5.4 - C ko:K00240 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 COG0479 Succinate dehydrogenase fumarate reductase Fe-S protein subunit
PBHJGNOG_03960 5.9e-298 - - - S - - - protein BT3056 SWALL AAO78162 (EMBL AE016938) (409 aa) fasta scores E()
PBHJGNOG_03961 0.0 - - - P - - - Sulfatase
PBHJGNOG_03962 3.17e-196 - - - K - - - Transcriptional regulator, AraC family
PBHJGNOG_03963 7.08e-47 - - - S - - - COG NOG31846 non supervised orthologous group
PBHJGNOG_03964 1.66e-179 - - - S - - - COG NOG26135 non supervised orthologous group
PBHJGNOG_03965 9.79e-296 - - - M - - - COG NOG24980 non supervised orthologous group
PBHJGNOG_03966 2.48e-297 purB 4.3.2.2 - F ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Psort location Cytoplasmic, score
PBHJGNOG_03967 1.35e-236 rluB 5.4.99.22 - J ko:K06178 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
PBHJGNOG_03968 0.0 asnS 6.1.1.22 - J ko:K01893 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Psort location Cytoplasmic, score
PBHJGNOG_03969 8.6e-118 - - - S - - - COG NOG27649 non supervised orthologous group
PBHJGNOG_03970 2.33e-108 rplM - - J ko:K02871 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PBHJGNOG_03971 1.02e-81 rpsI - - J ko:K02996 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS9 family
PBHJGNOG_03973 0.0 rpsA - - J ko:K02945 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence
PBHJGNOG_03974 3.29e-232 rnz 3.1.26.11 - S ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PBHJGNOG_03975 5.62e-126 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PBHJGNOG_03976 1.39e-79 - - - S - - - COG NOG23405 non supervised orthologous group
PBHJGNOG_03977 2.92e-103 - - - S - - - COG NOG28735 non supervised orthologous group
PBHJGNOG_03978 1.34e-188 mazG 3.6.1.66 - S ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_03979 2.4e-258 - - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_03980 4.87e-148 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PBHJGNOG_03981 1.01e-200 - - - K - - - methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC XylS family)
PBHJGNOG_03982 1.24e-162 lipB 2.3.1.181 - H ko:K03801 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate
PBHJGNOG_03983 4.46e-227 - - - M - - - Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
PBHJGNOG_03984 0.0 - - - I - - - pectin acetylesterase
PBHJGNOG_03985 3.97e-208 - - - S - - - oligopeptide transporter, OPT family
PBHJGNOG_03986 0.0 - - - E - - - Domain of Unknown Function with PDB structure (DUF3857)
PBHJGNOG_03987 3.65e-315 - - - L - - - Recombinase
PBHJGNOG_03992 1.47e-106 - - - L - - - DNA photolyase activity
PBHJGNOG_03993 7.98e-49 - - - M - - - self proteolysis
PBHJGNOG_03994 1.58e-149 - - - S - - - Psort location Cytoplasmic, score
PBHJGNOG_03997 1.73e-61 - - - S - - - HicB family
PBHJGNOG_03999 0.0 uvrB - - L ko:K03702 ko03420,map03420 ko00000,ko00001,ko03400 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PBHJGNOG_04000 0.0 - - - G - - - beta-galactosidase
PBHJGNOG_04001 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PBHJGNOG_04002 1.59e-175 - 4.2.2.23 PL11 S ko:K18197 - ko00000,ko01000 candidate rhamnogalacturonan lyase, polysaccharide lyase family 11 protein K01238
PBHJGNOG_04003 0.0 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PBHJGNOG_04004 2.07e-238 - - - G - - - CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238
PBHJGNOG_04005 0.0 - - - G - - - Belongs to the glycosyl hydrolase 28 family
PBHJGNOG_04006 0.0 - 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 Beta-galactosidase trimerisation domain
PBHJGNOG_04007 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PBHJGNOG_04008 3.85e-234 - - - E - - - GDSL-like Lipase/Acylhydrolase family
PBHJGNOG_04009 1.83e-308 ce 5.1.3.8 - G ko:K01787 ko00520,map00520 ko00000,ko00001,ko01000 COG COG2942 N-acyl-D-glucosamine 2-epimerase
PBHJGNOG_04010 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_04011 0.0 - - - F ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_04012 0.0 - - - S - - - Domain of unknown function (DUF5018)
PBHJGNOG_04013 0.0 - - - S - - - Domain of unknown function
PBHJGNOG_04014 0.0 - - - S - - - C terminal of Calcineurin-like phosphoesterase
PBHJGNOG_04015 0.0 - 3.1.1.53 - G ko:K05970 - ko00000,ko01000 COG NOG04984 non supervised orthologous group
PBHJGNOG_04016 0.0 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_04017 6.06e-276 - - - E - - - GDSL-like Lipase/Acylhydrolase family
PBHJGNOG_04018 3.1e-309 - - - - - - - -
PBHJGNOG_04019 2.26e-65 bglB 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 3 family
PBHJGNOG_04021 0.0 - - - C - - - Domain of unknown function (DUF4855)
PBHJGNOG_04022 0.0 - - - S - - - Domain of unknown function (DUF1735)
PBHJGNOG_04023 4.3e-222 - - - P ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_04024 2.81e-149 spk1 2.7.11.1, 6.3.2.4 - S ko:K01921,ko:K08884,ko:K12132 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01001,ko01011 PASTA domain protein
PBHJGNOG_04025 8.16e-29 rpmH - - J ko:K02914 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL34 family
PBHJGNOG_04026 2.28e-132 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PBHJGNOG_04027 0.0 - 3.1.3.1 - P ko:K01077 ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020 ko00000,ko00001,ko00002,ko00537,ko01000,ko04147 Belongs to the alkaline phosphatase family
PBHJGNOG_04029 6.29e-71 - - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_04030 3.43e-106 asnC - - K ko:K03718 - ko00000,ko03000 Transcriptional regulator, AsnC family
PBHJGNOG_04031 2.07e-202 - 5.2.1.8 - M ko:K03772,ko:K03773 - ko00000,ko01000,ko03110 Peptidyl-prolyl cis-trans isomerase
PBHJGNOG_04032 4.67e-136 fklB 5.2.1.8 - G ko:K03772,ko:K03773 - ko00000,ko01000,ko03110 Peptidyl-prolyl cis-trans isomerase
PBHJGNOG_04033 5.05e-170 cobB - - K ko:K12410 - ko00000,ko01000 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PBHJGNOG_04034 1.4e-44 - - - - - - - -
PBHJGNOG_04035 6.19e-196 - - - Q - - - COG NOG10855 non supervised orthologous group
PBHJGNOG_04036 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBHJGNOG_04037 0.0 - 3.2.1.51 GH29 G ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 COG COG3669 Alpha-L-fucosidase
PBHJGNOG_04038 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
PBHJGNOG_04039 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_04040 0.0 - - - P ko:K21572 - ko00000,ko02000 non supervised orthologous group
PBHJGNOG_04041 2.74e-306 - - - S - - - Domain of unknown function (DUF5126)
PBHJGNOG_04042 4.18e-24 - - - S - - - Domain of unknown function
PBHJGNOG_04043 0.0 - 4.2.2.5 PL8 N ko:K19049 - ko00000,ko01000 Polysaccharide lyase family 8, super-sandwich domain
PBHJGNOG_04044 0.0 - - - S - - - COG NOG25407 non supervised orthologous group
PBHJGNOG_04045 7.21e-188 lipB 3.1.4.55 - S ko:K06167 ko00440,map00440 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_04046 7.87e-243 murB 1.3.1.98 - M ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation
PBHJGNOG_04047 4.74e-208 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_04048 1.34e-232 ltd - - M - - - NAD dependent epimerase dehydratase family
PBHJGNOG_04049 1.71e-283 kbl 2.3.1.29 - H ko:K00639 ko00260,map00260 ko00000,ko00001,ko01000,ko01007 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA
PBHJGNOG_04050 2.07e-80 - - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_04051 3.97e-112 ftnA 1.16.3.2 - P ko:K02217 - ko00000,ko01000 Iron-storage protein
PBHJGNOG_04052 1.4e-282 lysA 4.1.1.20 - E ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PBHJGNOG_04053 0.0 lysC 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the aspartokinase family
PBHJGNOG_04054 2.59e-171 ftsE - - D ko:K09812 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03036 Psort location CytoplasmicMembrane, score 7.88
PBHJGNOG_04055 8.17e-147 hisI 3.5.4.19, 3.6.1.31 - E ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 belongs to the PRA-CH family
PBHJGNOG_04056 1.33e-178 hisF - - E ko:K02500 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PBHJGNOG_04057 2.31e-173 hisA 5.3.1.16 - E ko:K01814 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PBHJGNOG_04058 7.31e-142 hisH - - E ko:K02501 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PBHJGNOG_04059 3.74e-206 purU 3.5.1.10 - F ko:K01433 ko00630,ko00670,map00630,map00670 ko00000,ko00001,ko01000 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4)
PBHJGNOG_04063 0.0 - - - S - - - P-loop ATPase and inactivated derivatives
PBHJGNOG_04064 3.58e-81 - - - S - - - COG NOG19145 non supervised orthologous group
PBHJGNOG_04065 4.61e-120 - - - K ko:K03088 - ko00000,ko03021 RNA polymerase sigma-70 factor
PBHJGNOG_04066 1.09e-95 - - - - - - - -
PBHJGNOG_04067 6.85e-196 - - - PT - - - Domain of unknown function (DUF4974)
PBHJGNOG_04068 0.0 - - - P - - - TonB-dependent receptor
PBHJGNOG_04069 1.27e-251 - - - S - - - COG NOG27441 non supervised orthologous group
PBHJGNOG_04070 1.69e-159 - - - P - - - ATPases associated with a variety of cellular activities
PBHJGNOG_04071 3.54e-66 - - - - - - - -
PBHJGNOG_04072 1.89e-57 - - - S - - - COG NOG18433 non supervised orthologous group
PBHJGNOG_04073 1.65e-141 - - - S - - - Psort location CytoplasmicMembrane, score
PBHJGNOG_04074 1.19e-73 - - - S - - - COG NOG30654 non supervised orthologous group
PBHJGNOG_04075 5.84e-252 - - - L - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_04076 9.36e-160 - - - S ko:K07025 - ko00000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_04077 1.62e-182 - - - K - - - helix_turn_helix, Lux Regulon
PBHJGNOG_04078 1.22e-155 - - - S ko:K09702 - ko00000 Protein of unknown function (DUF1349)
PBHJGNOG_04079 7.66e-251 - - - S - - - COG NOG15865 non supervised orthologous group
PBHJGNOG_04080 1.94e-110 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PBHJGNOG_04081 1.03e-132 - - - - - - - -
PBHJGNOG_04082 3.95e-292 aroA 2.5.1.19 - E ko:K00800 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PBHJGNOG_04083 7.65e-136 - - - T - - - COG COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
PBHJGNOG_04084 6.6e-168 - - - S - - - Enoyl-(Acyl carrier protein) reductase
PBHJGNOG_04085 5.53e-250 - - - M - - - Peptidase, M28 family
PBHJGNOG_04086 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 beta-galactosidase
PBHJGNOG_04087 0.0 - 3.2.1.51 GH29 G ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 Alpha-L-fucosidase
PBHJGNOG_04088 0.0 - - - K - - - GxGYxY sequence motif in domain of unknown function N-terminal
PBHJGNOG_04089 1.56e-230 - - - M - - - F5/8 type C domain
PBHJGNOG_04090 0.0 - - - F ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_04091 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_04092 9.35e-228 - - - PT - - - Domain of unknown function (DUF4974)
PBHJGNOG_04093 6.96e-125 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PBHJGNOG_04094 0.0 - - - G - - - Glycosyl hydrolase family 92
PBHJGNOG_04095 0.0 - - - S - - - GxGYxY sequence motif in domain of unknown function N-terminal
PBHJGNOG_04096 0.0 - - - E ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_04097 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_04098 2.66e-239 - - - S - - - Concanavalin A-like lectin/glucanases superfamily
PBHJGNOG_04099 0.0 - - - T - - - COG NOG26059 non supervised orthologous group
PBHJGNOG_04100 1.23e-86 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_04101 1.67e-181 znuB - - P ko:K02075,ko:K09816 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC 3 transport family
PBHJGNOG_04102 5.09e-93 yjeE - - S ko:K06925 - ko00000,ko03016 Psort location Cytoplasmic, score
PBHJGNOG_04103 1.56e-46 - - - S - - - COG NOG34862 non supervised orthologous group
PBHJGNOG_04104 2.92e-314 - - - S - - - conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
PBHJGNOG_04105 4.75e-220 - - - S ko:K03924 - ko00000,ko01000 ATPase family associated with various cellular activities (AAA)
PBHJGNOG_04106 3.5e-309 - - - S - - - COG NOG26634 non supervised orthologous group
PBHJGNOG_04107 4.2e-145 - - - S - - - Domain of unknown function (DUF4129)
PBHJGNOG_04108 1.07e-193 - - - - - - - -
PBHJGNOG_04109 4.56e-229 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_04110 2.1e-161 - - - S - - - serine threonine protein kinase
PBHJGNOG_04111 9.37e-127 - - - L - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_04112 1.14e-77 - - - K - - - Acetyltransferase (GNAT) domain
PBHJGNOG_04113 6.82e-72 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_04114 1.17e-71 trxA - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Belongs to the thioredoxin family
PBHJGNOG_04115 0.0 dnaE 2.7.7.7 - L ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III alpha subunit
PBHJGNOG_04117 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 beta-galactosidase
PBHJGNOG_04118 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBHJGNOG_04119 1.11e-201 - - - K - - - helix_turn_helix, arabinose operon control protein
PBHJGNOG_04120 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PBHJGNOG_04121 0.0 - - - G - - - Glycosyl hydrolase, family 20, catalytic domain
PBHJGNOG_04122 0.0 - - - T - - - PAS domain S-box protein
PBHJGNOG_04123 1.65e-129 - - - J - - - COG COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
PBHJGNOG_04124 1e-301 modF - - P ko:K05776 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC molybdenum transporter, ATP-binding subunit modF
PBHJGNOG_04125 0.0 - - - T - - - Psort location CytoplasmicMembrane, score 7.88
PBHJGNOG_04126 2.71e-181 gpmA 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PBHJGNOG_04127 1.97e-257 fbaB 4.1.2.13 - G ko:K11645 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 COG COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes
PBHJGNOG_04128 5.26e-155 tal 2.2.1.2 - F ko:K00616,ko:K08314 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PBHJGNOG_04129 3.11e-221 - - - L - - - COG NOG21178 non supervised orthologous group
PBHJGNOG_04130 0.0 - - - V - - - MacB-like periplasmic core domain
PBHJGNOG_04131 1.68e-154 - - - V ko:K02003 - ko00000,ko00002,ko02000 bacteriocin export ABC transporter, lactococcin 972 group
PBHJGNOG_04132 2.94e-281 - - - M ko:K02005 - ko00000 Efflux transporter, RND family, MFP subunit
PBHJGNOG_04133 0.0 - - - MU - - - Psort location OuterMembrane, score
PBHJGNOG_04134 0.0 - - - T - - - Sigma-54 interaction domain protein
PBHJGNOG_04135 1.49e-290 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBHJGNOG_04136 8.1e-36 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_04137 1.35e-187 - - - Q - - - Protein of unknown function (DUF1698)
PBHJGNOG_04138 0.0 - 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 COG COG1022 Long-chain acyl-CoA synthetases (AMP-forming)
PBHJGNOG_04139 0.0 - 3.2.1.20 GH31 S ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 COG NOG06228 non supervised orthologous group
PBHJGNOG_04140 8.58e-162 cusR - - T ko:K07665 ko02020,map02020 ko00000,ko00001,ko00002,ko01504,ko02022 Transcriptional regulatory protein, C terminal
PBHJGNOG_04141 7.85e-302 arlS_2 - - T - - - histidine kinase DNA gyrase B
PBHJGNOG_04142 0.0 czcA_1 - - P ko:K15726 - ko00000,ko02000 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PBHJGNOG_04143 9.97e-257 czcB - - M ko:K15727 - ko00000,ko02000 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PBHJGNOG_04144 4.78e-289 czcC - - MU ko:K15725 - ko00000,ko02000 Outer membrane efflux protein
PBHJGNOG_04145 1.09e-83 - - - O - - - Glutaredoxin
PBHJGNOG_04146 5.72e-284 - 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Belongs to the metallo-dependent hydrolases superfamily. NagA family
PBHJGNOG_04147 8.11e-283 - 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Belongs to the metallo-dependent hydrolases superfamily. NagA family
PBHJGNOG_04155 3.02e-62 - - - S - - - Protein of unknown function (DUF1622)
PBHJGNOG_04156 2.62e-99 - - - - - - - -
PBHJGNOG_04157 4.36e-266 - - - L - - - COG NOG19081 non supervised orthologous group
PBHJGNOG_04158 3.23e-66 - - - S ko:K07075 - ko00000 Nucleotidyltransferase domain
PBHJGNOG_04159 1.32e-74 - - - S - - - Protein of unknown function DUF86
PBHJGNOG_04160 4.8e-128 - - - CO - - - Redoxin
PBHJGNOG_04161 1.6e-94 mip 5.2.1.8 - O ko:K01802 - ko00000,ko01000 COG COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1
PBHJGNOG_04164 7.52e-250 - 3.2.1.40 - G ko:K05989 - ko00000,ko01000 Alpha-L-rhamnosidase N-terminal domain protein
PBHJGNOG_04165 0.0 - 3.2.1.40 - G ko:K05989 - ko00000,ko01000 COG NOG04002 non supervised orthologous group
PBHJGNOG_04166 2.34e-288 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the CarA family
PBHJGNOG_04169 3.12e-46 - - - H - - - COG NOG08812 non supervised orthologous group
PBHJGNOG_04170 0.0 - - - H - - - COG NOG08812 non supervised orthologous group
PBHJGNOG_04171 3.45e-239 asd 1.2.1.11 - E ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PBHJGNOG_04172 0.0 - - - P - - - COG NOG11715 non supervised orthologous group
PBHJGNOG_04173 3.72e-302 - - - S - - - Protein of unknown function (DUF4876)
PBHJGNOG_04174 0.0 - - - - - - - -
PBHJGNOG_04175 0.0 - - - S - - - Fibrobacter succinogenes major domain (Fib_succ_major)
PBHJGNOG_04176 9.06e-122 - - - - - - - -
PBHJGNOG_04177 5.38e-131 - - - S ko:K09939 - ko00000 Putative PepSY_TM-like
PBHJGNOG_04178 4.59e-217 - - - V ko:K01990,ko:K19340 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 COG1131 ABC-type multidrug transport system ATPase component
PBHJGNOG_04179 6.87e-153 - - - - - - - -
PBHJGNOG_04180 2.2e-251 - - - S - - - Domain of unknown function (DUF4857)
PBHJGNOG_04181 1.76e-296 - - - S - - - Lamin Tail Domain
PBHJGNOG_04182 0.0 - - - E - - - Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PBHJGNOG_04183 0.0 - - - M - - - Glycosyltransferase, group 2 family protein
PBHJGNOG_04184 0.0 lytB - - D ko:K06381 - ko00000 SpoIID LytB domain protein
PBHJGNOG_04185 8.04e-292 - - - EGP ko:K08218 ko01501,map01501 ko00000,ko00001,ko00002,ko02000 Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_04186 1.17e-267 - - - S - - - Psort location CytoplasmicMembrane, score 10.00
PBHJGNOG_04187 3.18e-202 - - - G - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_04189 2.42e-183 - - - C ko:K18928 - ko00000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_04190 0.0 uvrA1 - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PBHJGNOG_04193 1.24e-296 nusA - - K ko:K02600 - ko00000,ko03009,ko03021 Participates in both transcription termination and antitermination
PBHJGNOG_04194 2.5e-104 rimP - - J ko:K09748 - ko00000,ko03009 Required for maturation of 30S ribosomal subunits
PBHJGNOG_04195 2.55e-208 - - - S ko:K07126 - ko00000 beta-lactamase activity
PBHJGNOG_04196 1.13e-84 - - - S - - - COG NOG29451 non supervised orthologous group
PBHJGNOG_04197 1.9e-164 - - - S ko:K07043 - ko00000 Psort location Cytoplasmic, score 8.96
PBHJGNOG_04198 4.16e-132 - - - S - - - Putative auto-transporter adhesin, head GIN domain
PBHJGNOG_04199 1.23e-101 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_04200 5.95e-112 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PBHJGNOG_04201 9.67e-175 argB 2.7.2.8 - F ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the acetylglutamate kinase family. ArgB subfamily
PBHJGNOG_04202 0.0 speA 4.1.1.19 - H ko:K01585 ko00330,ko01100,map00330,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the biosynthesis of agmatine from arginine
PBHJGNOG_04203 4.68e-121 aroK 2.7.1.71 - F ko:K00891 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PBHJGNOG_04204 3.76e-146 - - - S ko:K07078 - ko00000 oxidoreductase related to nitroreductase
PBHJGNOG_04205 5.87e-165 rnhA 3.1.26.4 - C ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 double-stranded RNA RNA-DNA hybrid binding protein
PBHJGNOG_04206 4.28e-97 - - - S - - - Psort location CytoplasmicMembrane, score 9.46
PBHJGNOG_04207 1.04e-268 - - - S - - - Pfam:DUF2029
PBHJGNOG_04208 0.0 - - - S - - - Pfam:DUF2029
PBHJGNOG_04209 1.3e-195 - - - G - - - Domain of unknown function (DUF3473)
PBHJGNOG_04210 0.0 msbA - - V ko:K06147,ko:K11085 ko02010,map02010 ko00000,ko00001,ko01000,ko02000 COG1132 ABC-type multidrug transport system, ATPase and permease components
PBHJGNOG_04211 0.0 - - - S - - - P-loop ATPase and inactivated derivatives
PBHJGNOG_04212 4.73e-146 - - - L - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_04213 0.0 - - - - - - - -
PBHJGNOG_04214 0.0 - - - - - - - -
PBHJGNOG_04215 3.73e-68 - - - - - - - -
PBHJGNOG_04216 2.33e-135 - - - L - - - Phage integrase SAM-like domain
PBHJGNOG_04217 4.75e-80 - - - - - - - -
PBHJGNOG_04218 0.0 - - - CO - - - Thioredoxin-like
PBHJGNOG_04219 0.0 mgtA 3.6.3.2 - P ko:K01531 - ko00000,ko01000 Psort location CytoplasmicMembrane, score
PBHJGNOG_04220 5.99e-303 arlS_1 - - T - - - histidine kinase DNA gyrase B
PBHJGNOG_04221 2.22e-161 - - - K ko:K07665 ko02020,map02020 ko00000,ko00001,ko00002,ko01504,ko02022 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PBHJGNOG_04222 7.23e-50 - - - G - - - beta-galactosidase
PBHJGNOG_04223 1.59e-136 - - - M - - - COG NOG27749 non supervised orthologous group
PBHJGNOG_04224 0.0 priA - - L ko:K04066 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PBHJGNOG_04225 0.0 - - - G - - - Domain of unknown function (DUF4091)
PBHJGNOG_04226 1.06e-110 ptpA 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PBHJGNOG_04227 0.0 - - - S ko:K07037 - ko00000 7TM receptor with intracellular HD hydrolase
PBHJGNOG_04228 0.0 gltX 6.1.1.17 - J ko:K01885 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PBHJGNOG_04229 6.96e-305 waaA 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 M ko:K02527 ko00540,ko01100,map00540,map01100 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 Psort location Cytoplasmic, score 8.96
PBHJGNOG_04230 2.89e-222 lacX - - G - - - COG COG2017 Galactose mutarotase and related enzymes
PBHJGNOG_04231 0.0 sacC 3.2.1.80 - G ko:K03332 ko00051,map00051 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 32 family
PBHJGNOG_04232 0.0 - - - S - - - TROVE domain
PBHJGNOG_04233 9.99e-246 - - - K - - - WYL domain
PBHJGNOG_04234 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PBHJGNOG_04235 0.0 - - - G - - - cog cog3537
PBHJGNOG_04236 0.0 - - - T - - - COG NOG26059 non supervised orthologous group
PBHJGNOG_04237 0.0 - - - N - - - Leucine rich repeats (6 copies)
PBHJGNOG_04238 0.0 - - - - - - - -
PBHJGNOG_04239 0.0 - - - S - - - Susd and RagB outer membrane lipoprotein
PBHJGNOG_04240 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_04241 0.0 - - - S - - - Domain of unknown function (DUF5010)
PBHJGNOG_04242 0.0 - - - G - - - Belongs to the glycosyl hydrolase 2 family
PBHJGNOG_04243 0.0 - 3.2.1.51 GH95 G ko:K15923 ko00511,map00511 ko00000,ko00001,ko01000 Glycosyl hydrolase family 65, N-terminal domain
PBHJGNOG_04244 0.0 - 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Psort location Periplasmic, score
PBHJGNOG_04245 0.0 - 3.1.1.53 - G ko:K05970 - ko00000,ko01000 Glycosyl hydrolase family 2, sugar binding domain protein
PBHJGNOG_04246 0.0 - 3.2.1.21 GH3 G ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 ko00000,ko00001,ko01000 Psort location Periplasmic, score 9.44
PBHJGNOG_04247 0.0 - - - G - - - Belongs to the glycosyl hydrolase 43 family
PBHJGNOG_04248 1.18e-88 - - - G - - - COG NOG09951 non supervised orthologous group
PBHJGNOG_04249 0.0 - - - P - - - TonB-linked outer membrane protein, SusC RagA family
PBHJGNOG_04250 0.0 - - - P ko:K21572 - ko00000,ko02000 SusD family
PBHJGNOG_04251 1.34e-152 - - - S - - - Protein of unknown function (DUF3823)
PBHJGNOG_04252 3.04e-287 - - - G - - - Belongs to the glycosyl hydrolase 43 family
PBHJGNOG_04253 0.0 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBHJGNOG_04254 5.46e-259 envC - - D - - - Peptidase, M23
PBHJGNOG_04255 2.23e-121 - - - S - - - COG NOG29315 non supervised orthologous group
PBHJGNOG_04256 0.0 - - - S - - - Tetratricopeptide repeat protein
PBHJGNOG_04257 9.69e-99 dut 3.6.1.23 - F ko:K01520 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
PBHJGNOG_04258 0.0 dgt 3.1.5.1 - F ko:K01129 ko00230,map00230 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score
PBHJGNOG_04259 2.76e-246 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_04260 5.6e-202 - - - I - - - Acyl-transferase
PBHJGNOG_04261 9.58e-117 - - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
PBHJGNOG_04262 2.5e-109 mraZ - - K ko:K03925 - ko00000 Belongs to the MraZ family
PBHJGNOG_04263 3.11e-214 rsmH 2.1.1.199 - J ko:K03438 - ko00000,ko01000,ko03009 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PBHJGNOG_04264 1.32e-38 - - - S - - - Psort location Cytoplasmic, score 8.96
PBHJGNOG_04265 0.0 ftsI 3.4.16.4 - M ko:K03587 ko00550,ko01501,map00550,map01501 ko00000,ko00001,ko01000,ko01011,ko03036 Cell division protein FtsI penicillin-binding protein
PBHJGNOG_04266 0.0 murE 6.3.2.13 - M ko:K01928 ko00300,ko00550,map00300,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PBHJGNOG_04267 2.52e-301 mraY 2.7.8.13 - M ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PBHJGNOG_04269 0.0 murD 6.3.2.9 - M ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PBHJGNOG_04270 1.2e-298 ftsW - - D ko:K03588 ko04112,map04112 ko00000,ko00001,ko02000,ko03036 Belongs to the SEDS family
PBHJGNOG_04271 6.19e-263 murG 2.4.1.227 GT28 M ko:K02563 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)

eggNOG-mapper v2.1.12 (Database: eggNOG v5.0.2, Mar. 2021 release)