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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
PIBGAFCF_00001	0.0	-	2.7.7.7	-	L	ko:K02334	-	ko00000,ko01000	DNA polymerase A domain
PIBGAFCF_00002	1.15e-06	-	-	-	-	-	-	-	-
PIBGAFCF_00003	1.9e-109	-	-	-	S	-	-	-	Protein of unknown function (DUF2815)
PIBGAFCF_00004	4.71e-203	-	-	-	L	-	-	-	Protein of unknown function (DUF2800)
PIBGAFCF_00005	3.53e-17	-	-	-	-	-	-	-	-
PIBGAFCF_00006	1.52e-58	-	-	-	-	-	-	-	-
PIBGAFCF_00008	1.1e-42	-	-	-	S	-	-	-	Uncharacterized protein YqaH
PIBGAFCF_00010	1.05e-40	-	-	-	-	-	-	-	-
PIBGAFCF_00011	1.35e-26	-	-	-	-	-	-	-	-
PIBGAFCF_00012	1.89e-68	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
PIBGAFCF_00013	5.95e-72	-	-	-	E	-	-	-	IrrE N-terminal-like domain
PIBGAFCF_00014	3.69e-192	-	-	-	S	-	-	-	Pfam:Arm-DNA-bind_4
PIBGAFCF_00015	0.0	sufB	-	-	O	ko:K07033,ko:K09014	-	ko00000	FeS cluster assembly
PIBGAFCF_00016	8.89e-101	nifU	-	-	C	ko:K04488	-	ko00000	COG0822 NifU homolog involved in Fe-S cluster formation
PIBGAFCF_00017	3.01e-294	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PIBGAFCF_00018	1.75e-311	sufD	-	-	O	ko:K07033,ko:K09015	-	ko00000	assembly protein SufD
PIBGAFCF_00019	3.82e-183	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component
PIBGAFCF_00021	2.97e-83	yurZ	-	-	S	-	-	-	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
PIBGAFCF_00022	2.88e-183	metQ	-	-	P	ko:K02072,ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the NlpA lipoprotein family
PIBGAFCF_00023	3.3e-135	metI	-	-	P	ko:K02069,ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG2011 ABC-type metal ion transport system, permease component
PIBGAFCF_00024	1.24e-235	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PIBGAFCF_00025	5.08e-74	yusD	-	-	S	-	-	-	SCP-2 sterol transfer family
PIBGAFCF_00026	2.25e-70	yusE	-	-	CO	-	-	-	Thioredoxin
PIBGAFCF_00027	5.93e-30	yusF	-	-	L	ko:K07476	-	ko00000	COG1658 Small primase-like proteins (Toprim domain)
PIBGAFCF_00028	2.99e-53	yusG	-	-	S	-	-	-	Protein of unknown function (DUF2553)
PIBGAFCF_00029	1.19e-84	gcvH	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate
PIBGAFCF_00030	4.13e-83	yusI	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	Belongs to the ArsC family
PIBGAFCF_00031	0.0	fadE	1.3.8.1	-	I	ko:K00248	ko00071,ko00280,ko00650,ko01100,ko01110,ko01120,ko01200,ko01212,map00071,map00280,map00650,map01100,map01110,map01120,map01200,map01212	ko00000,ko00001,ko01000	acyl-CoA dehydrogenase
PIBGAFCF_00032	3.02e-275	fadA	2.3.1.16	-	I	ko:K00632	ko00071,ko00280,ko00281,ko00362,ko00592,ko00642,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00362,map00592,map00642,map01100,map01110,map01120,map01130,map01212	ko00000,ko00001,ko00002,ko01000	Belongs to the thiolase family
PIBGAFCF_00033	0.0	fadN	1.1.1.35	-	I	ko:K07516	ko00071,ko00362,ko00650,ko01100,ko01120,ko01200,ko01212,map00071,map00362,map00650,map01100,map01120,map01200,map01212	ko00000,ko00001,ko00002,ko01000	3-hydroxyacyl-CoA dehydrogenase
PIBGAFCF_00034	1.72e-10	-	-	-	S	-	-	-	YuzL-like protein
PIBGAFCF_00035	6.69e-209	fadM	-	-	E	ko:K00318	ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130	ko00000,ko00001,ko01000	Proline dehydrogenase
PIBGAFCF_00036	7.03e-53	-	-	-	-	-	-	-	-
PIBGAFCF_00037	3.53e-69	yusN	-	-	M	-	-	-	Coat F domain
PIBGAFCF_00038	1.47e-86	yusO	-	-	K	-	-	-	Iron dependent repressor, N-terminal DNA binding domain
PIBGAFCF_00039	0.0	yusP	-	-	P	-	-	-	Major facilitator superfamily
PIBGAFCF_00040	6.56e-74	-	-	-	L	-	-	-	PFAM Restriction endonuclease BamHI
PIBGAFCF_00041	1.48e-23	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PIBGAFCF_00042	3.73e-159	-	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	DNA methylase
PIBGAFCF_00043	1.46e-50	yusU	-	-	S	-	-	-	Protein of unknown function (DUF2573)
PIBGAFCF_00044	1.06e-191	yusV	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
PIBGAFCF_00045	2.79e-62	-	-	-	S	-	-	-	YusW-like protein
PIBGAFCF_00046	0.0	pepF2	-	-	E	-	-	-	COG1164 Oligoendopeptidase F
PIBGAFCF_00047	1.77e-177	yusZ	-	-	IQ	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
PIBGAFCF_00048	5.63e-101	dps2	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
PIBGAFCF_00049	8.65e-295	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PIBGAFCF_00050	2.06e-160	cssR	-	-	T	ko:K07770	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PIBGAFCF_00051	9.22e-317	cssS	2.7.13.3	-	T	ko:K07650	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PIBGAFCF_00052	2.68e-32	-	-	-	-	-	-	-	-
PIBGAFCF_00053	6.7e-196	yuxN	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_00054	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PIBGAFCF_00055	1.83e-33	-	-	-	S	-	-	-	Protein of unknown function (DUF3970)
PIBGAFCF_00056	0.0	gerAA	-	-	EG	ko:K06288,ko:K06291,ko:K06310	-	ko00000	Spore germination protein
PIBGAFCF_00057	3e-235	gerAB	-	-	E	ko:K06289,ko:K06292	-	ko00000,ko02000	Spore germination protein
PIBGAFCF_00058	9.22e-248	gerAC	-	-	S	ko:K06290,ko:K06293,ko:K06312	-	ko00000	Spore germination B3/ GerAC like, C-terminal
PIBGAFCF_00059	2.48e-134	vraR	-	-	KT	ko:K07694,ko:K11618	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PIBGAFCF_00060	2.86e-246	vraS	2.7.13.3	-	T	ko:K07681,ko:K11617	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PIBGAFCF_00061	6.74e-159	-	-	-	S	ko:K11622	ko02020,map02020	ko00000,ko00001	Cell wall-active antibiotics response 4TMS YvqF
PIBGAFCF_00062	1.33e-165	liaG	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
PIBGAFCF_00063	6.99e-127	liaH	-	-	KT	ko:K03969,ko:K11620	ko02020,map02020	ko00000,ko00001,ko00002	COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription
PIBGAFCF_00064	7.39e-65	liaI	-	-	S	ko:K11619	ko02020,map02020	ko00000,ko00001,ko00002	membrane
PIBGAFCF_00065	9.45e-281	yvqJ	-	-	EGP	-	-	-	COG0477 Permeases of the major facilitator superfamily
PIBGAFCF_00066	3.89e-125	yvqK	2.5.1.17	-	S	ko:K00798	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Adenosyltransferase
PIBGAFCF_00067	1.87e-257	yvrA	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components
PIBGAFCF_00068	5.73e-224	btuC	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PIBGAFCF_00069	1.07e-211	yvrC	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PIBGAFCF_00070	4.79e-178	yvrD	-	-	IQ	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
PIBGAFCF_00071	9.6e-213	yvrE	-	-	G	ko:K14274	ko00040,map00040	ko00000,ko00001,ko01000	SMP-30/Gluconolaconase/LRE-like region
PIBGAFCF_00072	0.0	yvrG	-	-	T	-	-	-	Histidine kinase
PIBGAFCF_00073	4.48e-171	yvrH	-	-	T	ko:K02483	-	ko00000,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PIBGAFCF_00074	1.14e-48	-	-	-	-	-	-	-	-
PIBGAFCF_00075	1.47e-130	yvrI	-	-	K	ko:K03093	-	ko00000,ko03021	RNA polymerase
PIBGAFCF_00076	1.88e-21	-	-	-	S	-	-	-	YvrJ protein family
PIBGAFCF_00077	1.65e-290	oxdC	4.1.1.2	-	G	ko:K01569	ko00630,ko01100,map00630,map01100	ko00000,ko00001,ko01000	Oxalate decarboxylase
PIBGAFCF_00078	1.37e-78	yvrL	-	-	S	-	-	-	Regulatory protein YrvL
PIBGAFCF_00079	6.61e-187	fhuC	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
PIBGAFCF_00080	9.44e-217	fhuG	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PIBGAFCF_00081	6.08e-234	fhuB	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PIBGAFCF_00082	2.12e-226	fhuD	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PIBGAFCF_00083	4.36e-153	-	-	-	Q	-	-	-	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
PIBGAFCF_00084	0.0	yvsH	-	-	E	ko:K03294,ko:K03758	-	ko00000,ko02000	Arginine ornithine antiporter
PIBGAFCF_00085	4.34e-19	-	-	-	S	ko:K06427	-	ko00000	Small spore protein J (Spore_SspJ)
PIBGAFCF_00086	2.04e-110	yvsG	-	-	S	ko:K07038	-	ko00000	LexA-binding, inner membrane-associated putative hydrolase
PIBGAFCF_00087	3.8e-210	yvgJ	-	-	M	ko:K01138	-	ko00000,ko01000	Belongs to the LTA synthase family
PIBGAFCF_00088	2.24e-203	yvgJ	-	-	M	ko:K01138	-	ko00000,ko01000	Belongs to the LTA synthase family
PIBGAFCF_00089	1.97e-204	yvgK	-	-	P	ko:K07219	-	ko00000	COG1910 Periplasmic molybdate-binding protein domain
PIBGAFCF_00090	4.92e-174	modA	-	-	P	ko:K02020	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0725 ABC-type molybdate transport system, periplasmic component
PIBGAFCF_00091	1.21e-128	modB	-	-	P	ko:K02018	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG4149 ABC-type molybdate transport system, permease component
PIBGAFCF_00092	2.17e-146	yfiK	-	-	K	-	-	-	Regulator
PIBGAFCF_00093	3.01e-237	-	-	-	T	-	-	-	Histidine kinase
PIBGAFCF_00094	1.12e-216	sagG	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	COG1131 ABC-type multidrug transport system, ATPase component
PIBGAFCF_00095	3e-234	sagH	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 type transporter
PIBGAFCF_00096	1.44e-229	sagI	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	COG0842 ABC-type multidrug transport system, permease component
PIBGAFCF_00097	1.77e-200	yvgN	-	-	S	-	-	-	reductase
PIBGAFCF_00098	1.55e-110	yvgO	-	-	-	-	-	-	-
PIBGAFCF_00099	0.0	yvgP	-	-	P	ko:K03316	-	ko00000	COG0025 NhaP-type Na H and K H antiporters
PIBGAFCF_00100	0.0	cysI	1.8.1.2, 1.8.7.1	-	P	ko:K00381,ko:K00392	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate
PIBGAFCF_00101	0.0	cysJ	1.8.1.2	-	P	ko:K00380	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
PIBGAFCF_00102	3.26e-144	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
PIBGAFCF_00103	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
PIBGAFCF_00104	6.1e-128	yvgT	-	-	S	-	-	-	membrane
PIBGAFCF_00105	5.24e-188	-	-	-	S	-	-	-	Metallo-peptidase family M12
PIBGAFCF_00106	5.06e-94	bdbC	-	-	O	ko:K03611	-	ko00000,ko03110	Required for disulfide bond formation in some proteins
PIBGAFCF_00107	2.51e-135	bdbD	-	-	O	-	-	-	Thioredoxin
PIBGAFCF_00108	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	COG2217 Cation transport ATPase
PIBGAFCF_00109	0.0	copA	3.6.3.54	-	P	ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
PIBGAFCF_00110	9.29e-40	-	-	-	P	ko:K07213	ko04978,map04978	ko00000,ko00001	Heavy-metal-associated domain
PIBGAFCF_00111	8.06e-64	csoR	-	-	S	ko:K21600	-	ko00000,ko03000	transcriptional
PIBGAFCF_00112	4.69e-238	yvaA	1.1.1.371	-	S	ko:K16044	ko00562,ko01120,map00562,map01120	ko00000,ko00001,ko01000	Oxidoreductase
PIBGAFCF_00113	1.03e-153	azoR	-	-	I	ko:K01118	-	ko00000,ko01000	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PIBGAFCF_00114	0.0	ytnJ	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PIBGAFCF_00115	4.4e-29	ytnI	-	-	O	-	-	-	COG0695 Glutaredoxin and related proteins
PIBGAFCF_00116	7.09e-226	ytmO	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PIBGAFCF_00117	1.18e-176	tcyN	-	-	E	ko:K16960	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1126 ABC-type polar amino acid transport system, ATPase component
PIBGAFCF_00118	5.33e-152	-	-	-	U	ko:K16959	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PIBGAFCF_00119	1.35e-152	ytmL	-	-	P	ko:K16958,ko:K16959	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PIBGAFCF_00120	1.8e-181	tcyK	-	-	M	ko:K16957	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial periplasmic substrate-binding proteins
PIBGAFCF_00121	3.28e-167	-	-	-	ET	ko:K16956,ko:K16957,ko:K16961	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial periplasmic substrate-binding proteins
PIBGAFCF_00122	5.25e-129	ytmI	-	-	K	ko:K00680	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
PIBGAFCF_00123	4.27e-201	ytlI	-	-	K	ko:K21960	-	ko00000,ko03000	LysR substrate binding domain
PIBGAFCF_00124	1.18e-179	yvaG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the short-chain dehydrogenases reductases (SDR) family
PIBGAFCF_00125	9.41e-56	yrdF	-	-	K	ko:K03623	-	ko00000	ribonuclease inhibitor
PIBGAFCF_00126	1.83e-09	-	-	-	-	-	-	-	-
PIBGAFCF_00127	8.17e-31	-	-	-	-	-	-	-	-
PIBGAFCF_00129	2.51e-86	-	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	Ami_2
PIBGAFCF_00130	1.37e-86	-	-	-	S	-	-	-	Pfam:Phage_holin_4_1
PIBGAFCF_00133	8.27e-229	-	-	-	S	-	-	-	Domain of unknown function (DUF2479)
PIBGAFCF_00134	0.0	-	-	-	S	-	-	-	Peptidase_G2, IMC autoproteolytic cleavage domain
PIBGAFCF_00135	1.33e-259	acm2	3.2.1.17	-	NU	ko:K01185	-	ko00000,ko01000	Prophage endopeptidase tail
PIBGAFCF_00136	2.17e-138	-	-	-	S	-	-	-	Phage tail protein
PIBGAFCF_00137	0.0	-	-	-	S	-	-	-	peptidoglycan catabolic process
PIBGAFCF_00138	1.78e-16	-	-	-	-	-	-	-	-
PIBGAFCF_00139	1.65e-31	-	-	-	-	-	-	-	-
PIBGAFCF_00140	3.6e-76	-	-	-	-	-	-	-	-
PIBGAFCF_00141	2.86e-40	-	-	-	-	-	-	-	-
PIBGAFCF_00142	3.61e-61	-	-	-	S	-	-	-	Bacteriophage HK97-gp10, putative tail-component
PIBGAFCF_00143	4.36e-20	-	-	-	S	-	-	-	Phage head-tail joining protein
PIBGAFCF_00144	2.01e-31	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
PIBGAFCF_00145	4.59e-57	-	-	-	S	-	-	-	peptidoglycan catabolic process
PIBGAFCF_00146	7.43e-09	-	-	-	-	-	-	-	-
PIBGAFCF_00147	8.05e-226	-	-	-	S	-	-	-	capsid protein
PIBGAFCF_00148	5.48e-143	-	-	-	S	-	-	-	peptidase activity
PIBGAFCF_00149	2.44e-305	-	-	-	S	-	-	-	Phage portal protein
PIBGAFCF_00150	1.56e-14	-	-	-	-	-	-	-	-
PIBGAFCF_00151	3.71e-289	-	-	-	S	-	-	-	Phage Terminase
PIBGAFCF_00152	1.85e-110	-	-	-	S	-	-	-	Phage terminase, small subunit
PIBGAFCF_00153	3.03e-28	-	-	-	-	-	-	-	-
PIBGAFCF_00154	8.48e-88	-	-	-	S	-	-	-	HNH endonuclease
PIBGAFCF_00157	3.02e-99	-	-	-	L	-	-	-	Phage integrase family
PIBGAFCF_00158	4.1e-70	-	-	-	M	-	-	-	ArpU family transcriptional regulator
PIBGAFCF_00159	8.16e-07	-	-	-	-	-	-	-	-
PIBGAFCF_00160	1.09e-61	-	-	-	-	-	-	-	-
PIBGAFCF_00166	1.65e-104	-	-	-	S	-	-	-	dUTPase
PIBGAFCF_00169	1.18e-127	-	-	-	H	-	-	-	C-5 cytosine-specific DNA methylase
PIBGAFCF_00170	8.03e-70	spoVFB	-	-	H	ko:K06411	-	ko00000	Together with DpaA, catalyzes the conversion of dihydrodipicolinate to dipicolinate (DPA)
PIBGAFCF_00171	5.04e-201	dpaA	-	-	CH	ko:K06410	-	ko00000	Dipicolinate synthase subunit A
PIBGAFCF_00172	2.17e-56	ymxH	-	-	S	-	-	-	YlmC YmxH family
PIBGAFCF_00173	9.39e-296	mlpA	-	-	S	-	-	-	Belongs to the peptidase M16 family
PIBGAFCF_00174	1.33e-228	ylxY	-	-	G	-	-	-	Sporulation protein, polysaccharide deacetylase
PIBGAFCF_00175	0.0	pnp	2.7.7.8	-	J	ko:K00962	ko00230,ko00240,ko03018,map00230,map00240,map03018	ko00000,ko00001,ko00002,ko01000,ko03016,ko03019	Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
PIBGAFCF_00176	4.12e-56	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PIBGAFCF_00177	6.31e-224	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
PIBGAFCF_00178	2.64e-214	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PIBGAFCF_00179	2.38e-67	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PIBGAFCF_00180	1.11e-59	ylxP	-	-	S	ko:K09764	-	ko00000	protein conserved in bacteria
PIBGAFCF_00181	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PIBGAFCF_00182	6.16e-63	ylxQ	-	-	J	-	-	-	ribosomal protein
PIBGAFCF_00183	6.76e-56	ylxR	-	-	K	ko:K07742	-	ko00000	nucleic-acid-binding protein implicated in transcription termination
PIBGAFCF_00184	1.35e-262	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
PIBGAFCF_00185	9.4e-105	rimP	-	-	S	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
PIBGAFCF_00186	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PIBGAFCF_00187	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PIBGAFCF_00188	2.58e-293	rasP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
PIBGAFCF_00189	8.59e-271	dxr	1.1.1.267	-	I	ko:K00099	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
PIBGAFCF_00190	1.48e-176	cdsA	2.7.7.41	-	S	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
PIBGAFCF_00191	2.49e-183	uppS	2.5.1.31	-	I	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PIBGAFCF_00192	1.59e-117	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PIBGAFCF_00193	2.03e-163	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
PIBGAFCF_00194	4.66e-200	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PIBGAFCF_00195	1.74e-167	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
PIBGAFCF_00196	2.54e-84	ylxL	-	-	-	-	-	-	-
PIBGAFCF_00197	3.96e-177	sigD	-	-	K	ko:K02405	ko02020,ko02025,ko02026,ko02040,ko05111,map02020,map02025,map02026,map02040,map05111	ko00000,ko00001,ko02035,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PIBGAFCF_00198	6.74e-112	cheD	3.5.1.44	-	NT	ko:K03411	ko02030,map02030	ko00000,ko00001,ko01000,ko02035	Deamidates glutamine residues to glutamate on methyl- accepting chemotaxis receptors (MCPs). CheD-mediated MCP deamidation is required for productive communication of the conformational signals of the chemoreceptors to the CheA kinase
PIBGAFCF_00199	1.39e-141	cheC	-	-	NT	ko:K03410	ko02030,map02030	ko00000,ko00001,ko02035	COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation
PIBGAFCF_00200	1.01e-104	cheW	-	-	NT	ko:K03408	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	COG0835 Chemotaxis signal transduction protein
PIBGAFCF_00201	0.0	cheA	2.7.13.3	-	NT	ko:K03407	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035	COG0643 Chemotaxis protein histidine kinase and related kinases
PIBGAFCF_00202	2.95e-241	cheB	3.1.1.61, 3.5.1.44	-	NT	ko:K03412	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR
PIBGAFCF_00203	1.43e-196	ylxH	-	-	D	ko:K04562	-	ko00000,ko02035	Belongs to the ParA family
PIBGAFCF_00204	4.59e-210	flhF	-	-	N	ko:K02404	-	ko00000,ko02035	Flagellar biosynthesis regulator FlhF
PIBGAFCF_00205	0.0	flhA	-	-	N	ko:K02400	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
PIBGAFCF_00206	1.34e-237	flhB	-	-	N	ko:K02401	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
PIBGAFCF_00207	1.06e-163	fliR	-	-	N	ko:K02421	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Flagellar biosynthetic protein FliR
PIBGAFCF_00208	9.02e-51	fliQ	-	-	N	ko:K02420	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Role in flagellar biosynthesis
PIBGAFCF_00209	1.21e-141	fliP	-	-	N	ko:K02419	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Plays a role in the flagellum-specific transport system
PIBGAFCF_00210	6.3e-142	fliZ	-	-	N	ko:K02418	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Flagellar biosynthesis protein, FliO
PIBGAFCF_00211	2.12e-77	cheY	-	-	T	ko:K03413	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko02022,ko02035	response regulator
PIBGAFCF_00212	9.42e-231	fliY	-	-	N	ko:K02417	ko02030,ko02040,map02030,map02040	ko00000,ko00001,ko02035,ko02044	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
PIBGAFCF_00213	1.28e-228	fliM	-	-	N	ko:K02416	ko02030,ko02040,map02030,map02040	ko00000,ko00001,ko02035	One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation
PIBGAFCF_00214	3.66e-78	fliL	-	-	N	ko:K02415	-	ko00000,ko02035	Controls the rotational direction of flagella during chemotaxis
PIBGAFCF_00215	1.04e-174	flgG	-	-	N	ko:K02390	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar basal body rod
PIBGAFCF_00216	2.43e-90	flgD	-	-	N	ko:K02389	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar basal body rod modification protein
PIBGAFCF_00217	7.87e-242	fliK	-	-	N	ko:K02414	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar hook-length control protein
PIBGAFCF_00218	3.78e-76	ylxF	-	-	S	-	-	-	MgtE intracellular N domain
PIBGAFCF_00219	2.17e-92	fliJ	-	-	N	ko:K02413	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar biosynthesis chaperone
PIBGAFCF_00220	2.02e-306	fliI	3.6.3.14	-	NU	ko:K02412	ko02040,map02040	ko00000,ko00001,ko01000,ko02035,ko02044	COG1157 Flagellar biosynthesis type III secretory pathway ATPase
PIBGAFCF_00221	6.92e-116	fliH	-	-	NU	ko:K02411	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	COG1317 Flagellar biosynthesis type III secretory pathway protein
PIBGAFCF_00222	4.78e-227	fliG	-	-	N	ko:K02410	ko02030,ko02040,map02030,map02040	ko00000,ko00001,ko02035	One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation
PIBGAFCF_00223	0.0	fliF	-	-	N	ko:K02409	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	The M ring may be actively involved in energy transduction
PIBGAFCF_00224	1.51e-50	fliE	-	-	N	ko:K02408	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar hook-basal body
PIBGAFCF_00225	1.46e-96	flgC	-	-	N	ko:K02388	ko02040,map02040	ko00000,ko00001,ko02035	Belongs to the flagella basal body rod proteins family
PIBGAFCF_00226	3.14e-81	flgB	-	-	N	ko:K02387	ko02040,map02040	ko00000,ko00001,ko02035	Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body
PIBGAFCF_00227	7.94e-175	codY	-	-	K	ko:K03706	-	ko00000,ko03000	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
PIBGAFCF_00228	0.0	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PIBGAFCF_00229	1.43e-118	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PIBGAFCF_00230	2.96e-213	xerC	-	-	L	ko:K03733,ko:K04763	-	ko00000,ko03036	tyrosine recombinase XerC
PIBGAFCF_00231	1.05e-311	trmFO	2.1.1.74	-	J	ko:K04094	-	ko00000,ko01000,ko03016,ko03036	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PIBGAFCF_00232	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PIBGAFCF_00233	6.19e-208	dprA	-	-	LU	ko:K04096	-	ko00000	Rossmann fold nucleotide-binding protein involved in DNA uptake
PIBGAFCF_00234	1.26e-212	sucD	6.2.1.5	-	C	ko:K01902	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
PIBGAFCF_00235	1.66e-269	sucC	6.2.1.5	-	C	ko:K01903	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
PIBGAFCF_00236	6.68e-57	ylqH	-	-	S	ko:K04061	-	ko00000,ko02044	homolog of the cytoplasmic domain of flagellar protein FhlB
PIBGAFCF_00237	0.0	ylqG	-	-	-	-	-	-	-
PIBGAFCF_00238	1.87e-171	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PIBGAFCF_00239	5.95e-202	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PIBGAFCF_00240	8.14e-75	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PIBGAFCF_00241	2.22e-173	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
PIBGAFCF_00242	4.17e-119	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PIBGAFCF_00243	5.66e-79	ylqD	-	-	S	-	-	-	YlqD protein
PIBGAFCF_00244	4.9e-49	ylqC	-	-	S	ko:K06960	-	ko00000	Belongs to the UPF0109 family
PIBGAFCF_00245	1.13e-58	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
PIBGAFCF_00246	2e-301	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PIBGAFCF_00247	1.97e-66	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PIBGAFCF_00248	2.09e-221	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PIBGAFCF_00249	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
PIBGAFCF_00250	2.48e-173	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PIBGAFCF_00251	1.15e-43	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PIBGAFCF_00252	5.81e-166	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	reductase
PIBGAFCF_00253	2.08e-215	fabD	2.3.1.39	-	I	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	malonyl CoA-acyl carrier protein transacylase
PIBGAFCF_00254	2.58e-228	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PIBGAFCF_00255	2.96e-119	fapR	-	-	K	-	-	-	Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism
PIBGAFCF_00256	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PIBGAFCF_00257	3.97e-200	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase
PIBGAFCF_00258	1.69e-152	sdaAB	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase
PIBGAFCF_00259	0.0	yloV	-	-	S	ko:K07030	-	ko00000	kinase related to dihydroxyacetone kinase
PIBGAFCF_00260	6.07e-77	yloU	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_00261	3.49e-36	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
PIBGAFCF_00262	5.45e-146	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
PIBGAFCF_00263	4.85e-148	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
PIBGAFCF_00264	6.97e-208	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PIBGAFCF_00265	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
PIBGAFCF_00266	4.92e-169	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
PIBGAFCF_00267	7.22e-262	rlmN	2.1.1.192	-	J	ko:K06941	-	ko00000,ko01000,ko03009	Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PIBGAFCF_00268	2.98e-315	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PIBGAFCF_00269	3.85e-214	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PIBGAFCF_00270	4.8e-109	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PIBGAFCF_00271	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PIBGAFCF_00272	2e-283	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PIBGAFCF_00273	2.53e-38	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PIBGAFCF_00274	1.16e-142	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
PIBGAFCF_00275	3.97e-54	ylzA	-	-	S	ko:K09777	-	ko00000	Belongs to the UPF0296 family
PIBGAFCF_00276	8e-194	yloC	-	-	S	-	-	-	stress-induced protein
PIBGAFCF_00277	0.0	yloB	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	COG0474 Cation transport ATPase
PIBGAFCF_00278	0.0	FbpA	-	-	K	-	-	-	RNA-binding protein homologous to eukaryotic snRNP
PIBGAFCF_00279	0.0	-	3.2.1.1	GH13	G	ko:K01176	ko00500,ko01100,ko04973,map00500,map01100,map04973	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
PIBGAFCF_00280	1.85e-98	sirC	1.3.1.76, 4.99.1.4	-	H	ko:K02304	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Siroheme synthase
PIBGAFCF_00281	1.13e-175	sirB	4.99.1.4	-	S	ko:K03794	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sirohydrochlorin ferrochelatase
PIBGAFCF_00282	7.4e-179	cobA	2.1.1.107	-	H	ko:K02303	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the precorrin methyltransferase family
PIBGAFCF_00283	1.31e-140	cysC	2.7.1.25	-	P	ko:K00860	ko00230,ko00920,ko01100,ko01120,map00230,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of activated sulfate
PIBGAFCF_00284	5.92e-282	sat	2.7.7.4	-	P	ko:K00958	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the sulfate adenylyltransferase family
PIBGAFCF_00285	5.26e-223	cysP	-	-	P	ko:K16331	-	ko00000,ko02000	phosphate transporter
PIBGAFCF_00286	7.81e-178	cysH	1.8.4.10, 1.8.4.8	-	EH	ko:K00390	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the PAPS reductase family. CysH subfamily
PIBGAFCF_00287	1e-145	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PIBGAFCF_00288	1.17e-159	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PIBGAFCF_00289	2.36e-218	pyrD	1.3.1.14	-	F	ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PIBGAFCF_00290	6.57e-177	pyrK	-	-	C	ko:K02823	ko00240,ko01100,map00240,map01100	ko00000,ko00001	Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
PIBGAFCF_00291	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the CarB family
PIBGAFCF_00292	4.71e-263	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
PIBGAFCF_00293	1.67e-309	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PIBGAFCF_00294	2.06e-204	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
PIBGAFCF_00295	1e-289	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Xanthine uracil
PIBGAFCF_00296	2.21e-122	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PIBGAFCF_00297	2.09e-213	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
PIBGAFCF_00298	8.42e-102	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PIBGAFCF_00299	4.22e-83	ylyA	-	-	T	-	-	-	COG1734 DnaK suppressor protein
PIBGAFCF_00300	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PIBGAFCF_00301	1.85e-99	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	Cell division initiation protein
PIBGAFCF_00302	3.8e-176	ylmH	-	-	S	-	-	-	conserved protein, contains S4-like domain
PIBGAFCF_00303	5.12e-56	ylmG	-	-	S	ko:K02221	-	ko00000,ko02044	membrane
PIBGAFCF_00304	8.91e-83	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PIBGAFCF_00305	6.55e-155	ylmE	-	-	S	ko:K06997	-	ko00000	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PIBGAFCF_00306	3.85e-196	ylmD	-	-	S	ko:K05810	-	ko00000,ko01000	Belongs to the multicopper oxidase YfiH RL5 family
PIBGAFCF_00307	7.13e-52	ylmC	-	-	S	-	-	-	sporulation protein
PIBGAFCF_00308	1.67e-308	argE	-	-	E	ko:K20895	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Acetylornithine deacetylase
PIBGAFCF_00309	8.63e-182	ylmA	3.6.3.34	-	P	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1119 ABC-type molybdenum transport system, ATPase component photorepair protein PhrA
PIBGAFCF_00310	3.8e-178	sigG	-	-	K	ko:K03091	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PIBGAFCF_00311	3.64e-161	sigE	-	-	K	ko:K03091	-	ko00000,ko03021	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PIBGAFCF_00312	2.17e-213	spoIIGA	-	-	M	ko:K06383	-	ko00000,ko01000,ko01002	aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR
PIBGAFCF_00313	0.0	bpr	-	-	O	ko:K13276	-	ko00000,ko01000,ko01002,ko03110	COG1404 Subtilisin-like serine proteases
PIBGAFCF_00314	4.32e-259	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PIBGAFCF_00315	3.7e-297	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PIBGAFCF_00316	3.74e-170	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PIBGAFCF_00317	3.07e-210	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	cell wall formation
PIBGAFCF_00318	9.42e-258	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PIBGAFCF_00319	2.7e-236	spoVE	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
PIBGAFCF_00320	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PIBGAFCF_00321	2.36e-220	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PIBGAFCF_00322	0.0	murE	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PIBGAFCF_00323	0.0	spoVD	-	-	M	ko:K08384	ko00550,map00550	ko00000,ko00001,ko01011	stage V sporulation protein D
PIBGAFCF_00324	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
PIBGAFCF_00325	2.81e-67	ftsL	-	-	D	-	-	-	Essential cell division protein
PIBGAFCF_00326	1.66e-218	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PIBGAFCF_00327	9.07e-102	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
PIBGAFCF_00328	0.0	bshC	-	-	S	ko:K22136	-	ko00000	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
PIBGAFCF_00329	4.46e-190	panE	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PIBGAFCF_00330	2.68e-115	ylbP	-	-	K	-	-	-	n-acetyltransferase
PIBGAFCF_00331	1.65e-106	ylbO	-	-	S	ko:K06314	-	ko00000,ko03000	SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
PIBGAFCF_00332	1.71e-37	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
PIBGAFCF_00333	4.69e-115	ylbN	-	-	S	ko:K07040	-	ko00000	metal-binding, possibly nucleic acid-binding protein
PIBGAFCF_00334	1.26e-281	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
PIBGAFCF_00335	7.74e-234	ylbL	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
PIBGAFCF_00336	2.03e-177	ylbK	-	-	S	ko:K07001	-	ko00000	esterase of the alpha-beta hydrolase superfamily
PIBGAFCF_00337	8.16e-268	ylbJ	-	-	S	-	-	-	Sporulation integral membrane protein YlbJ
PIBGAFCF_00338	2.38e-109	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PIBGAFCF_00339	4.27e-126	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	Methyltransferase
PIBGAFCF_00340	4.62e-56	ylbG	-	-	S	-	-	-	UPF0298 protein
PIBGAFCF_00341	3.73e-94	ylbF	-	-	S	-	-	-	Belongs to the UPF0342 family
PIBGAFCF_00342	1.73e-48	ylbE	-	-	S	-	-	-	YlbE-like protein
PIBGAFCF_00343	5.5e-83	ylbD	-	-	S	-	-	-	Putative coat protein
PIBGAFCF_00344	9.62e-247	ylbC	-	-	S	-	-	-	protein with SCP PR1 domains
PIBGAFCF_00345	1.31e-93	ylbB	-	-	T	-	-	-	COG0517 FOG CBS domain
PIBGAFCF_00346	1.33e-75	ylbA	-	-	S	-	-	-	YugN-like family
PIBGAFCF_00347	1.35e-207	ctaG	-	-	S	ko:K02862	-	ko00000	cytochrome c oxidase
PIBGAFCF_00348	3.53e-69	ctaF	1.9.3.1	-	C	ko:K02277	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	COG3125 Heme copper-type cytochrome quinol oxidase, subunit 4
PIBGAFCF_00349	3.43e-141	ctaE	1.9.3.1	-	C	ko:K02276	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	COG1845 Heme copper-type cytochrome quinol oxidase, subunit 3
PIBGAFCF_00350	0.0	ctaD	1.9.3.1	-	C	ko:K02274	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
PIBGAFCF_00351	1.61e-250	ctaC	1.9.3.1	-	C	ko:K02275	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B)
PIBGAFCF_00352	2.95e-209	ctaB	2.5.1.141	-	O	ko:K02257	ko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714	ko00000,ko00001,ko00002,ko01000,ko01006,ko03029	Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group
PIBGAFCF_00353	3.88e-211	ctaA	-	-	O	ko:K02259	ko00190,ko00860,ko01100,ko01110,ko02020,ko04714,map00190,map00860,map01100,map01110,map02020,map04714	ko00000,ko00001,ko00002,ko03029	Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group
PIBGAFCF_00354	0.0	pyc	6.4.1.1	-	C	ko:K01958	ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
PIBGAFCF_00355	3.73e-266	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
PIBGAFCF_00356	1.99e-58	ylaN	-	-	S	-	-	-	Belongs to the UPF0358 family
PIBGAFCF_00357	6.76e-217	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
PIBGAFCF_00358	4.45e-104	ylaL	-	-	S	-	-	-	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
PIBGAFCF_00359	4.29e-310	ylaK	-	-	T	ko:K07175	-	ko00000	ATPase related to phosphate starvation-inducible protein PhoH
PIBGAFCF_00360	2.67e-129	ylaJ	-	-	S	-	-	-	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PIBGAFCF_00361	7.95e-45	ylaI	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_00362	1.41e-64	-	-	-	S	-	-	-	YlaH-like protein
PIBGAFCF_00363	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
PIBGAFCF_00364	5.62e-33	-	-	-	S	-	-	-	Family of unknown function (DUF5325)
PIBGAFCF_00365	1.97e-52	ylaE	-	-	-	-	-	-	-
PIBGAFCF_00367	9.3e-32	ylaA	-	-	-	-	-	-	-
PIBGAFCF_00368	0.0	mpl	3.4.24.28, 3.4.24.29	-	E	ko:K01400,ko:K01401,ko:K19351	ko01503,ko05150,map01503,map05150	ko00000,ko00001,ko01000,ko01002	Peptidase M4
PIBGAFCF_00369	1.08e-92	ykzC	-	-	S	-	-	-	Acetyltransferase (GNAT) family
PIBGAFCF_00370	1.57e-193	suhB	3.1.3.25	-	G	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	ko00000,ko00001,ko00002,ko01000	Inositol monophosphatase
PIBGAFCF_00371	7.89e-32	ykzI	-	-	-	-	-	-	-
PIBGAFCF_00372	4.72e-154	yktB	-	-	S	-	-	-	Belongs to the UPF0637 family
PIBGAFCF_00373	5.44e-56	yktA	-	-	S	-	-	-	Belongs to the UPF0223 family
PIBGAFCF_00374	0.0	speA	4.1.1.17, 4.1.1.19	-	E	ko:K01581,ko:K01585	ko00330,ko00480,ko01100,ko01110,ko01130,map00330,map00480,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Arginine
PIBGAFCF_00375	3.33e-173	pdaA_2	3.5.1.104	-	G	ko:K01567,ko:K22278	-	ko00000,ko01000	Polysaccharide deacetylase
PIBGAFCF_00376	6.84e-60	slp	-	-	CO	-	-	-	COG0526, thiol-disulfide isomerase and thioredoxins
PIBGAFCF_00377	0.0	pdhD	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
PIBGAFCF_00378	6.09e-294	pdhC	2.3.1.12	-	C	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PIBGAFCF_00379	5.84e-226	pdhB	1.2.4.1	-	C	ko:K00162	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
PIBGAFCF_00380	1.04e-249	pdhA	1.2.4.1	-	C	ko:K00161	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
PIBGAFCF_00381	9.3e-84	ykyA	-	-	L	-	-	-	Putative cell-wall binding lipoprotein
PIBGAFCF_00382	1.04e-06	-	-	-	S	-	-	-	Protein of unknown function (Tiny_TM_bacill)
PIBGAFCF_00383	1.49e-126	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PIBGAFCF_00384	3.14e-180	ykrA	-	-	S	-	-	-	hydrolases of the HAD superfamily
PIBGAFCF_00385	7.4e-41	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
PIBGAFCF_00386	0.0	rnjA	-	-	S	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PIBGAFCF_00387	0.0	ade	3.5.4.2	-	F	ko:K01486	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
PIBGAFCF_00388	9.71e-148	ktrA	-	-	P	ko:K03499	-	ko00000,ko02000	COG0569 K transport systems, NAD-binding component
PIBGAFCF_00389	3.99e-192	ykqA	-	-	P	-	-	-	Gamma-glutamyl cyclotransferase, AIG2-like
PIBGAFCF_00390	9.16e-301	kinC	2.7.13.3	-	T	ko:K07698	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	COG0642 Signal transduction histidine kinase
PIBGAFCF_00391	7.46e-59	abrB	-	-	K	ko:K06284	-	ko00000,ko03000	of stationary sporulation gene expression
PIBGAFCF_00392	6.17e-234	mreBH	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Rod-share determining protein MreBH
PIBGAFCF_00393	7.7e-19	-	-	-	S	-	-	-	Uncharacterized protein YkpC
PIBGAFCF_00394	1.63e-300	pepS	-	-	E	ko:K19689	-	ko00000,ko01000,ko01002	COG2309 Leucyl aminopeptidase (aminopeptidase T)
PIBGAFCF_00395	4.63e-200	panE1	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PIBGAFCF_00396	0.0	ykpA	-	-	S	-	-	-	COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PIBGAFCF_00397	3.54e-48	ykoA	-	-	-	-	-	-	-
PIBGAFCF_00398	3.77e-138	sipT	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PIBGAFCF_00399	0.0	fruA	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type)
PIBGAFCF_00400	8.8e-210	pfkB	2.7.1.56	-	G	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family
PIBGAFCF_00401	8.9e-168	fruR	-	-	K	ko:K03436	-	ko00000,ko03000	Transcriptional regulator
PIBGAFCF_00402	4.52e-264	yknZ	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter (permease)
PIBGAFCF_00403	3.39e-157	yknY	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PIBGAFCF_00404	7e-224	yknX	-	-	M	ko:K02005,ko:K13888	-	ko00000,ko00002,ko02000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PIBGAFCF_00405	5.77e-134	yknW	-	-	S	-	-	-	Yip1 domain
PIBGAFCF_00406	4.7e-43	moaD	-	-	H	ko:K03636	ko04122,map04122	ko00000,ko00001	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
PIBGAFCF_00407	1.19e-107	moaE	2.8.1.12	-	H	ko:K03635	ko00790,ko01100,ko04122,map00790,map01100,map04122	ko00000,ko00001,ko01000	COG0314 Molybdopterin converting factor, large subunit
PIBGAFCF_00408	3.06e-111	mobB	-	-	H	ko:K03753	-	ko00000	molybdopterin-guanine dinucleotide biosynthesis protein
PIBGAFCF_00409	7.3e-305	moeA	2.10.1.1	-	H	ko:K03750	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	molybdopterin
PIBGAFCF_00410	1.45e-233	moeB	2.7.7.73, 2.7.7.80	-	H	ko:K03148,ko:K21029	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000	COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
PIBGAFCF_00411	3.85e-130	mobA	2.7.7.77	-	H	ko:K03752	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
PIBGAFCF_00412	8.39e-201	yknT	-	-	-	ko:K06437	-	ko00000	-
PIBGAFCF_00413	3.55e-125	rok	-	-	K	-	-	-	Repressor of ComK
PIBGAFCF_00415	1.9e-93	ykuV	-	-	CO	-	-	-	thiol-disulfide
PIBGAFCF_00417	5.77e-177	ykuT	-	-	M	ko:K22044	-	ko00000,ko02000	Mechanosensitive ion channel
PIBGAFCF_00418	1.25e-51	ykuS	-	-	S	-	-	-	Belongs to the UPF0180 family
PIBGAFCF_00419	8.58e-271	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PIBGAFCF_00420	4.79e-128	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PIBGAFCF_00421	2.61e-95	fld	-	-	C	ko:K03839	-	ko00000	Flavodoxin
PIBGAFCF_00422	1.07e-207	ykuO	-	-	-	-	-	-	-
PIBGAFCF_00423	2.92e-113	ykuN	-	-	C	ko:K03839	-	ko00000	Flavodoxin
PIBGAFCF_00424	1.08e-214	ccpC	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_00425	8.55e-99	ykuL	-	-	S	-	-	-	CBS domain
PIBGAFCF_00426	2.63e-36	ykzF	-	-	S	-	-	-	Antirepressor AbbA
PIBGAFCF_00427	6.94e-117	ykuK	-	-	S	ko:K09776	-	ko00000	Ribonuclease H-like
PIBGAFCF_00428	2.11e-49	ykuJ	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_00429	1.74e-293	ykuI	-	-	T	-	-	-	Diguanylate phosphodiesterase
PIBGAFCF_00431	1.33e-175	fadH	1.3.1.34	-	IQ	ko:K00219	-	ko00000,ko01000	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PIBGAFCF_00432	7.29e-188	ykuE	-	-	S	ko:K07098	-	ko00000	Metallophosphoesterase
PIBGAFCF_00433	3.48e-114	ykuD	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_00434	2e-302	ykuC	-	-	EGP	-	-	-	COG0477 Permeases of the major facilitator superfamily
PIBGAFCF_00435	1.45e-107	ykyB	-	-	S	-	-	-	YkyB-like protein
PIBGAFCF_00436	1.3e-211	cheV	-	-	T	ko:K03408,ko:K03415	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko02022,ko02035	Chemotaxis protein CheV
PIBGAFCF_00437	2.22e-15	-	-	-	-	-	-	-	-
PIBGAFCF_00438	5.43e-274	patA	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
PIBGAFCF_00439	0.0	kinA	2.7.13.3	-	T	ko:K02491	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PIBGAFCF_00440	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
PIBGAFCF_00441	9.82e-167	ykwD	-	-	J	-	-	-	protein with SCP PR1 domains
PIBGAFCF_00442	9.19e-65	-	-	-	-	-	-	-	-
PIBGAFCF_00443	5.71e-203	glxR	1.1.1.31	-	I	ko:K00020	ko00280,ko01100,map00280,map01100	ko00000,ko00001,ko01000	COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
PIBGAFCF_00444	0.0	mcpC	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis protein
PIBGAFCF_00445	3.25e-252	splB	4.1.99.14	-	L	ko:K03716	-	ko00000,ko01000	Spore photoproduct lyase
PIBGAFCF_00446	1.22e-48	splA	-	-	S	ko:K06315	-	ko00000,ko03000	Transcriptional regulator
PIBGAFCF_00447	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PIBGAFCF_00448	1.51e-53	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPr
PIBGAFCF_00449	0.0	ptsG	2.7.1.199	-	G	ko:K20116,ko:K20117,ko:K20118	ko00010,ko00520,ko02060,map00010,map00520,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PIBGAFCF_00450	1.54e-196	glcT	-	-	K	ko:K03480,ko:K03488	-	ko00000,ko03000	antiterminator
PIBGAFCF_00451	4.21e-217	ykvZ	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_00452	5.05e-258	ykvY	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	COG0006 Xaa-Pro aminopeptidase
PIBGAFCF_00453	0.0	zosA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	COG2217 Cation transport ATPase
PIBGAFCF_00454	1.04e-105	stoA	-	-	CO	-	-	-	thiol-disulfide
PIBGAFCF_00455	1.16e-300	ykvU	-	-	S	-	-	-	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PIBGAFCF_00456	5.23e-136	ykvT	3.5.1.28	-	M	ko:K01449	-	ko00000,ko01000	Cell Wall Hydrolase
PIBGAFCF_00457	8.76e-38	-	-	-	-	-	-	-	-
PIBGAFCF_00458	1.56e-34	ykvS	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_00459	5.82e-53	ykvR	-	-	S	-	-	-	Protein of unknown function (DUF3219)
PIBGAFCF_00460	2.56e-124	queF	1.7.1.13	-	S	ko:K09457	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
PIBGAFCF_00461	1.98e-176	queE	4.3.99.3	-	H	ko:K10026	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
PIBGAFCF_00462	2.55e-102	queD	4.1.2.50, 4.2.3.12	-	H	ko:K01737	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000,ko03016	synthase
PIBGAFCF_00463	2.72e-162	queC	6.3.4.20	-	F	ko:K06920	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
PIBGAFCF_00464	1.81e-196	-	-	-	-	-	-	-	-
PIBGAFCF_00466	6.18e-222	ykvI	-	-	S	-	-	-	membrane
PIBGAFCF_00467	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	Belongs to the ClpA ClpB family
PIBGAFCF_00468	2.96e-176	motA	-	-	N	ko:K02556	ko02020,ko02030,ko02040,map02020,map02030,map02040	ko00000,ko00001,ko02000,ko02035	flagellar motor
PIBGAFCF_00469	5.44e-160	motB	-	-	N	ko:K02557	ko02030,ko02040,map02030,map02040	ko00000,ko00001,ko02000,ko02035	Flagellar motor protein
PIBGAFCF_00470	3.34e-101	ykvE	-	-	K	ko:K15973	-	ko00000,ko03000	transcriptional
PIBGAFCF_00471	0.0	kinD	2.7.13.3	-	T	ko:K13532	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	COG0642 Signal transduction histidine kinase
PIBGAFCF_00473	7.7e-117	mtnD	1.13.11.53, 1.13.11.54	-	S	ko:K08967	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
PIBGAFCF_00474	1.9e-139	mtnB	4.2.1.109	-	E	ko:K08964	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P)
PIBGAFCF_00475	1.45e-169	mtnX	3.1.3.87	-	E	ko:K08966	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
PIBGAFCF_00476	4.16e-284	mtnW	5.3.2.5	-	G	ko:K08965	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the enolization of 2,3-diketo-5- methylthiopentyl-1-phosphate (DK-MTP-1-P) into 2-hydroxy-3-keto-5- methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P)
PIBGAFCF_00477	1.52e-283	mtnE	-	-	E	ko:K08969,ko:K19549	ko00270,ko01100,ko01130,map00270,map01100,map01130	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
PIBGAFCF_00478	1.03e-175	mtnU	3.5.1.3	-	S	ko:K13566	ko00250,map00250	ko00000,ko00001,ko01000	Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
PIBGAFCF_00479	9.79e-278	mtnK	2.7.1.100	-	F	ko:K00899	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
PIBGAFCF_00480	1.59e-244	mtnA	5.3.1.23	-	E	ko:K08963	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
PIBGAFCF_00482	9.18e-105	ogt	2.1.1.63	-	L	ko:K00567,ko:K13531	-	ko00000,ko01000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PIBGAFCF_00483	0.0	kinE	2.7.13.3	-	T	ko:K13533	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PIBGAFCF_00484	1.59e-242	ykrP	-	-	G	-	-	-	COG3594 Fucose 4-O-acetylase and related acetyltransferases
PIBGAFCF_00485	1.37e-26	ykzE	-	-	-	-	-	-	-
PIBGAFCF_00486	1.59e-143	-	-	-	S	-	-	-	Protein of unknown function (DUF421)
PIBGAFCF_00487	7.83e-301	ktrD	-	-	P	-	-	-	COG0168 Trk-type K transport systems, membrane components
PIBGAFCF_00488	1.74e-197	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
PIBGAFCF_00489	1.55e-159	ykrK	-	-	S	-	-	-	Domain of unknown function (DUF1836)
PIBGAFCF_00490	3.31e-35	sspD	-	-	S	ko:K06421	-	ko00000	small acid-soluble spore protein
PIBGAFCF_00491	1.17e-219	ykrI	-	-	S	-	-	-	Anti-sigma factor N-terminus
PIBGAFCF_00492	6.02e-163	sigI	-	-	K	ko:K03093	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PIBGAFCF_00493	5.75e-164	ykoY	-	-	P	-	-	-	COG0861 Membrane protein TerC, possibly involved in tellurium resistance
PIBGAFCF_00494	1.21e-123	ykoX	-	-	S	-	-	-	membrane-associated protein
PIBGAFCF_00495	0.0	ykoW	2.7.7.65	-	T	ko:K21023	ko02025,map02025	ko00000,ko00001,ko01000	Diguanylate cyclase
PIBGAFCF_00496	1.82e-197	ku	-	-	L	ko:K10979	ko03450,map03450	ko00000,ko00001,ko03400	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
PIBGAFCF_00497	0.0	ligD	6.5.1.1	-	L	ko:K01971	ko03450,map03450	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA ligase
PIBGAFCF_00498	2.57e-127	ykoP	-	-	G	-	-	-	polysaccharide deacetylase
PIBGAFCF_00499	1.15e-104	ykoM	-	-	K	ko:K15973	-	ko00000,ko03000	transcriptional
PIBGAFCF_00500	3.57e-35	ykoL	-	-	-	-	-	-	-
PIBGAFCF_00501	2.24e-23	-	-	-	-	-	-	-	-
PIBGAFCF_00502	3.53e-69	tnrA	-	-	K	-	-	-	transcriptional
PIBGAFCF_00503	7.93e-306	mgtE	-	-	P	ko:K06213	-	ko00000,ko02000	Acts as a magnesium transporter
PIBGAFCF_00505	4.54e-303	ydhD	-	-	M	-	-	-	Glycosyl hydrolase
PIBGAFCF_00506	3.67e-123	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
PIBGAFCF_00507	0.0	ykoD	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PIBGAFCF_00508	7.49e-161	ykoC	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
PIBGAFCF_00509	2.08e-179	yojH	-	-	T	ko:K17763	-	ko00000,ko03021	COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PIBGAFCF_00510	2.76e-221	isp	-	-	O	ko:K13275	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
PIBGAFCF_00511	0.0	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PIBGAFCF_00512	7.17e-152	nsr	-	-	T	-	-	-	COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
PIBGAFCF_00513	5.93e-263	-	-	-	EGP	ko:K05820	-	ko00000,ko02000	COG0477 Permeases of the major facilitator superfamily
PIBGAFCF_00514	8.96e-151	-	-	-	K	-	-	-	Collagen triple helix repeat
PIBGAFCF_00515	2.15e-260	-	-	-	M	-	-	-	Glycosyl transferase family 2
PIBGAFCF_00517	1.46e-70	-	-	-	D	-	-	-	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
PIBGAFCF_00518	1.3e-90	ohrB	-	-	O	-	-	-	Organic hydroperoxide resistance protein
PIBGAFCF_00519	1.55e-36	ohrR	-	-	K	-	-	-	COG1846 Transcriptional regulators
PIBGAFCF_00520	2.88e-41	ohrR	-	-	K	-	-	-	COG1846 Transcriptional regulators
PIBGAFCF_00521	1.89e-90	ohrA	-	-	O	-	-	-	Organic hydroperoxide resistance protein
PIBGAFCF_00522	1.35e-281	proA	1.2.1.41	-	E	ko:K00147	ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PIBGAFCF_00523	3.28e-257	proB	2.7.2.11	-	E	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PIBGAFCF_00524	1.03e-211	purU	3.5.1.10	-	F	ko:K01433	ko00630,ko00670,map00630,map00670	ko00000,ko00001,ko01000	Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4)
PIBGAFCF_00525	1.22e-64	ykkD	-	-	P	ko:K18925	-	ko00000,ko00002,ko02000	Multidrug resistance protein
PIBGAFCF_00526	8.24e-64	ykkC	-	-	P	ko:K18924	-	ko00000,ko00002,ko02000	Multidrug resistance protein
PIBGAFCF_00527	1.01e-118	ykkB	-	-	J	-	-	-	COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
PIBGAFCF_00528	2.16e-120	ykhA	-	-	I	-	-	-	Acyl-CoA hydrolase
PIBGAFCF_00529	1.45e-179	ykgA	-	-	E	-	-	-	Amidinotransferase
PIBGAFCF_00530	6.11e-256	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	6-phosphogluconolactonase
PIBGAFCF_00531	1.49e-227	ykfD	-	-	E	ko:K02032,ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PIBGAFCF_00532	1.74e-198	ykfC	3.4.14.13	-	M	ko:K20742	-	ko00000,ko01000,ko01002	COG0791 Cell wall-associated hydrolases (invasion-associated proteins)
PIBGAFCF_00533	2e-244	ykfB	5.1.1.20	-	M	ko:K19802	-	ko00000,ko01000	Belongs to the mandelate racemase muconate lactonizing enzyme family
PIBGAFCF_00534	8.59e-221	ykfA	3.4.17.13	-	V	ko:K01297	-	ko00000,ko01000,ko01002,ko01011	proteins, homologs of microcin C7 resistance protein MccF
PIBGAFCF_00535	0.0	dppE	-	-	E	ko:K16199	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PIBGAFCF_00536	1.49e-230	dppD	-	-	P	ko:K02031,ko:K15583,ko:K16202	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PIBGAFCF_00537	3.22e-218	dppC	-	-	EP	ko:K15582,ko:K16201	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PIBGAFCF_00538	2.68e-202	dppB	-	-	P	ko:K16200	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PIBGAFCF_00539	4.18e-198	dppA	-	-	E	ko:K16203	-	ko00000,ko01000,ko01002	D-aminopeptidase
PIBGAFCF_00540	0.0	yubD	-	-	P	-	-	-	Major Facilitator Superfamily
PIBGAFCF_00541	2.08e-266	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PIBGAFCF_00543	3.02e-227	ykcC	-	GT2	M	ko:K20534	-	ko00000,ko01000,ko01005,ko02000	COG0463 Glycosyltransferases involved in cell wall biogenesis
PIBGAFCF_00544	0.0	ykcB	-	-	M	-	-	-	COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PIBGAFCF_00545	1.75e-227	ykcA	-	-	E	ko:K15975	-	ko00000	COG0346 Lactoylglutathione lyase and related lyases
PIBGAFCF_00546	2.11e-308	steT	-	-	E	ko:K03294	-	ko00000	amino acid
PIBGAFCF_00547	1.85e-144	ykaA	-	-	P	ko:K07220	-	ko00000	COG1392 Phosphate transport regulator (distant homolog of PhoU)
PIBGAFCF_00548	2.36e-224	pit	-	-	P	ko:K03306	-	ko00000	phosphate transporter
PIBGAFCF_00549	1.05e-169	spoIISA	-	-	S	ko:K06388	-	ko00000	Toxin SpoIISA, type II toxin-antitoxin system
PIBGAFCF_00550	2.53e-31	spoIISB	-	-	S	ko:K06389	-	ko00000	Stage II sporulation protein SB
PIBGAFCF_00551	2.43e-206	xlyA	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	n-acetylmuramoyl-L-alanine amidase
PIBGAFCF_00552	2.62e-49	xhlB	-	-	S	-	-	-	SPP1 phage holin
PIBGAFCF_00553	6.44e-50	xhlA	-	-	S	-	-	-	Haemolysin XhlA
PIBGAFCF_00554	2.97e-167	xepA	-	-	-	-	-	-	-
PIBGAFCF_00555	1.05e-36	xkdX	-	-	-	-	-	-	-
PIBGAFCF_00557	1.04e-194	-	-	-	-	-	-	-	-
PIBGAFCF_00558	1.48e-36	-	-	-	-	-	-	-	-
PIBGAFCF_00559	3.37e-111	-	-	-	S	-	-	-	Uncharacterised protein conserved in bacteria (DUF2313)
PIBGAFCF_00560	7.44e-208	-	-	-	S	-	-	-	Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology
PIBGAFCF_00561	2.35e-75	xkdS	-	-	S	-	-	-	Protein of unknown function (DUF2634)
PIBGAFCF_00562	3.05e-44	xkdR	-	-	S	-	-	-	Protein of unknown function (DUF2577)
PIBGAFCF_00563	2.78e-208	xkdQ	-	-	G	-	-	-	NLP P60 protein
PIBGAFCF_00564	1.25e-144	xkdP	-	-	S	-	-	-	Lysin motif
PIBGAFCF_00565	3.8e-245	xkdO	-	-	L	-	-	-	Transglycosylase SLT domain
PIBGAFCF_00566	4.33e-27	-	-	-	-	-	-	-	-
PIBGAFCF_00567	7.28e-96	-	-	-	S	-	-	-	Phage XkdN-like tail assembly chaperone protein, TAC
PIBGAFCF_00568	8.21e-97	xkdM	-	-	S	-	-	-	Phage tail tube protein
PIBGAFCF_00569	4.44e-285	xkdK	-	-	S	-	-	-	Phage tail sheath C-terminal domain
PIBGAFCF_00570	3.86e-21	-	-	-	-	-	-	-	-
PIBGAFCF_00571	1.82e-75	xkdJ	-	-	-	-	-	-	-
PIBGAFCF_00572	2.41e-77	xkdI	-	-	S	-	-	-	Bacteriophage HK97-gp10, putative tail-component
PIBGAFCF_00574	8.84e-61	yqbG	-	-	S	-	-	-	Protein of unknown function (DUF3199)
PIBGAFCF_00575	3.38e-202	xkdG	-	-	S	-	-	-	Phage capsid family
PIBGAFCF_00576	8.47e-119	xkdF3	-	-	L	-	-	-	Putative phage serine protease XkdF
PIBGAFCF_00577	9.96e-302	xkdE3	-	-	S	-	-	-	portal protein
PIBGAFCF_00578	3.35e-263	xtmB	-	-	S	ko:K06909	-	ko00000	phage terminase, large subunit
PIBGAFCF_00579	1.37e-139	xtmA	-	-	L	ko:K07474	-	ko00000	phage terminase small subunit
PIBGAFCF_00580	3.15e-105	xpf	-	-	K	ko:K03088	-	ko00000,ko03021	COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
PIBGAFCF_00584	8.33e-185	xkdC	-	-	L	-	-	-	Bacterial dnaA protein
PIBGAFCF_00586	1.27e-72	xre	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PIBGAFCF_00587	2.86e-139	xkdA	-	-	E	-	-	-	IrrE N-terminal-like domain
PIBGAFCF_00588	2.69e-128	yjqB	-	-	S	-	-	-	phage-related replication protein
PIBGAFCF_00589	3.19e-79	yjqA	-	-	S	-	-	-	Bacterial PH domain
PIBGAFCF_00590	5.72e-213	xlyB	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	N-acetylmuramoyl-L-alanine amidase
PIBGAFCF_00592	5.18e-273	rapA	-	-	S	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	ko00000,ko00001,ko01000	Response regulator aspartate phosphatase
PIBGAFCF_00593	9.4e-100	yjoA	-	-	S	-	-	-	DinB family
PIBGAFCF_00594	7.24e-164	yjnA	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
PIBGAFCF_00596	2.46e-48	-	-	-	T	-	-	-	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PIBGAFCF_00597	2.99e-104	-	-	-	T	-	-	-	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PIBGAFCF_00598	9.74e-43	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
PIBGAFCF_00599	1.25e-55	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
PIBGAFCF_00600	3.18e-203	uxaA	4.2.1.7	-	G	ko:K01685	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Altronate
PIBGAFCF_00601	3.99e-232	exuR	-	-	K	ko:K02529	-	ko00000,ko03000	transcriptional
PIBGAFCF_00602	2.92e-80	uxaC	5.3.1.12	-	G	ko:K01812	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	glucuronate isomerase
PIBGAFCF_00603	8.37e-278	yjlD	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
PIBGAFCF_00604	1.7e-87	yjlC	-	-	S	-	-	-	Protein of unknown function (DUF1641)
PIBGAFCF_00605	1.47e-110	yjlB	-	-	S	-	-	-	Cupin domain
PIBGAFCF_00606	5.99e-220	yjlA	-	-	EG	-	-	-	Putative multidrug resistance efflux transporter
PIBGAFCF_00607	4.5e-159	yjkB	-	-	P	ko:K02068	-	ko00000,ko00002,ko02000	Belongs to the ABC transporter superfamily
PIBGAFCF_00608	3.47e-150	ybbM	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	transport system, permease component
PIBGAFCF_00609	1.44e-180	hemD	4.2.1.75	-	H	ko:K01719	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Uroporphyrinogen-III synthase
PIBGAFCF_00610	1.73e-40	-	-	-	-	-	-	-	-
PIBGAFCF_00611	3.96e-275	yjiC	-	-	CG	-	-	-	COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase
PIBGAFCF_00612	7.68e-274	yjiB	1.14.14.46	-	C	ko:K15468,ko:K16593	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko00199,ko01000,ko01008	Cytochrome P450
PIBGAFCF_00613	5.56e-111	yjgD	-	-	S	-	-	-	Protein of unknown function (DUF1641)
PIBGAFCF_00614	2.62e-157	-	1.17.1.9	-	C	ko:K00123	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	ko00000,ko00001,ko01000	formate dehydrogenase, alpha subunit
PIBGAFCF_00615	0.0	-	1.17.1.9	-	C	ko:K00123	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	ko00000,ko00001,ko01000	formate dehydrogenase, alpha subunit
PIBGAFCF_00616	4.05e-122	yjgB	-	-	S	-	-	-	Domain of unknown function (DUF4309)
PIBGAFCF_00617	6.25e-83	yjgA	-	-	T	-	-	-	Protein of unknown function (DUF2809)
PIBGAFCF_00618	1.07e-28	yjfB	-	-	S	-	-	-	Putative motility protein
PIBGAFCF_00620	2.77e-133	-	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC SapB transporter
PIBGAFCF_00621	4.16e-69	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PIBGAFCF_00622	3.81e-45	-	-	-	-	-	-	-	-
PIBGAFCF_00623	1.67e-151	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
PIBGAFCF_00624	1.39e-177	yulB	-	-	K	ko:K02530	-	ko00000,ko03000	COG1349 Transcriptional regulators of sugar metabolism
PIBGAFCF_00625	2.12e-106	lacG	3.2.1.21, 3.2.1.85, 3.2.1.86	GT1	G	ko:K01220,ko:K01223,ko:K05350	ko00010,ko00052,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00052,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PIBGAFCF_00626	1.19e-198	lacG	3.2.1.21, 3.2.1.85, 3.2.1.86	GT1	G	ko:K01220,ko:K01223,ko:K05350	ko00010,ko00052,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00052,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PIBGAFCF_00627	3.63e-66	celC	2.7.1.196, 2.7.1.205, 2.7.1.207	-	G	ko:K02759,ko:K02786	ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PIBGAFCF_00628	0.0	lacE	2.7.1.207	-	G	ko:K02761,ko:K02787,ko:K02788	ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PIBGAFCF_00629	7.71e-277	yvfO	3.2.1.89	-	G	ko:K01224	-	ko00000,ko01000	arabinogalactan
PIBGAFCF_00630	1.09e-99	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PIBGAFCF_00631	5.5e-302	yfjF	-	-	EGP	-	-	-	Belongs to the major facilitator superfamily
PIBGAFCF_00632	7.1e-58	yjcS	-	-	S	-	-	-	Antibiotic biosynthesis monooxygenase
PIBGAFCF_00633	3.78e-196	penP	3.5.2.6	-	V	ko:K17836,ko:K18766	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	beta-lactamase
PIBGAFCF_00635	4.57e-21	-	-	-	N	-	-	-	Kelch motif
PIBGAFCF_00636	0.000667	KLHL36	-	-	T	ko:K13958	-	ko00000,ko04121	protein modification by small protein conjugation
PIBGAFCF_00640	4.74e-38	-	-	-	S	-	-	-	Bacillus cereus group antimicrobial protein
PIBGAFCF_00641	2.46e-57	dinB2	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PIBGAFCF_00642	9.18e-49	-	-	-	S	-	-	-	YolD-like protein
PIBGAFCF_00643	0.0	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
PIBGAFCF_00644	7.99e-240	-	-	-	K	-	-	-	Psort location Cytoplasmic, score
PIBGAFCF_00646	9.5e-81	-	-	-	H	-	-	-	Acetyltransferase (GNAT) domain
PIBGAFCF_00647	2.21e-28	yokK	-	-	S	-	-	-	SMI1 / KNR4 family
PIBGAFCF_00648	1.61e-128	-	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	2-dehydropantoate 2-reductase
PIBGAFCF_00649	1.86e-116	yokH	-	-	G	-	-	-	SMI1 / KNR4 family
PIBGAFCF_00650	1.06e-42	-	-	-	-	-	-	-	-
PIBGAFCF_00651	2.31e-90	-	-	-	S	-	-	-	Bacterial EndoU nuclease
PIBGAFCF_00652	2.03e-64	-	-	-	-	-	-	-	-
PIBGAFCF_00654	1.19e-41	-	-	-	S	-	-	-	KTSC domain
PIBGAFCF_00655	1.11e-13	acm2	3.2.1.17	-	NU	ko:K01185	-	ko00000,ko01000	Prophage endopeptidase tail
PIBGAFCF_00656	2.38e-153	-	-	-	D	-	-	-	phage tail tape measure protein
PIBGAFCF_00657	2.88e-47	-	-	-	D	-	-	-	phage tail tape measure protein
PIBGAFCF_00664	1.53e-25	-	-	-	-	-	-	-	-
PIBGAFCF_00665	7.77e-110	-	-	-	-	-	-	-	-
PIBGAFCF_00672	1.05e-32	-	-	-	-	-	-	-	-
PIBGAFCF_00673	2.38e-18	-	-	-	S	-	-	-	Cro/C1-type HTH DNA-binding domain
PIBGAFCF_00676	5.56e-100	-	-	-	N	-	-	-	bacterial-type flagellum assembly
PIBGAFCF_00677	8.56e-120	-	-	-	L	ko:K04763	-	ko00000,ko03036	Belongs to the 'phage' integrase family
PIBGAFCF_00678	6.97e-134	-	-	-	S	-	-	-	Helix-turn-helix domain
PIBGAFCF_00679	4.81e-253	-	-	-	L	ko:K04763	-	ko00000,ko03036	Belongs to the 'phage' integrase family
PIBGAFCF_00681	5.84e-273	metC	4.4.1.8	-	E	ko:K01760	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
PIBGAFCF_00682	2.09e-266	metB	2.5.1.48	-	E	ko:K01739	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
PIBGAFCF_00683	1.79e-157	yjcH	-	-	P	ko:K07214	-	ko00000	COG2382 Enterochelin esterase and related enzymes
PIBGAFCF_00684	6.7e-119	yjcG	-	-	J	-	-	-	Belongs to the 2H phosphoesterase superfamily. YjcG family
PIBGAFCF_00685	6.83e-94	yjcF	-	-	S	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PIBGAFCF_00686	1.19e-45	-	-	-	K	-	-	-	SpoVT / AbrB like domain
PIBGAFCF_00687	1.09e-165	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
PIBGAFCF_00688	1.16e-153	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 type transporter
PIBGAFCF_00689	6.53e-167	blm	3.5.2.6	-	S	ko:K17837	ko01501,map01501	ko00000,ko00001,ko01000	Belongs to the metallo-beta-lactamase superfamily. Class-B beta-lactamase family
PIBGAFCF_00690	1.62e-44	-	-	-	-	-	-	-	-
PIBGAFCF_00691	0.0	yjcD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
PIBGAFCF_00692	1.05e-50	spoVIF	-	-	S	-	-	-	Stage VI sporulation protein F
PIBGAFCF_00693	5.69e-05	-	-	-	S	-	-	-	Protein of unknown function (Tiny_TM_bacill)
PIBGAFCF_00696	1.69e-72	yjcA	-	-	S	-	-	-	Protein of unknown function (DUF1360)
PIBGAFCF_00697	4.61e-69	cotV	-	-	S	ko:K06340	-	ko00000	Spore Coat Protein X and V domain
PIBGAFCF_00698	1.02e-36	cotW	-	-	-	ko:K06341	-	ko00000	-
PIBGAFCF_00699	3.55e-98	cotX	-	-	S	ko:K06342	-	ko00000	Spore Coat Protein X and V domain
PIBGAFCF_00700	1.75e-120	cotY	-	-	S	ko:K06343	-	ko00000	Spore coat protein Z
PIBGAFCF_00701	3.35e-105	cotZ	-	-	S	ko:K06344	-	ko00000	Spore coat protein
PIBGAFCF_00702	2.47e-100	yjbX	-	-	S	-	-	-	Spore coat protein
PIBGAFCF_00703	1.38e-179	fabI	1.3.1.10, 1.3.1.9	-	I	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl- acyl-carrier-protein reductase NADH
PIBGAFCF_00704	2.99e-180	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
PIBGAFCF_00705	1.17e-226	thiF	2.7.7.73, 2.7.7.80	-	H	ko:K03148,ko:K21029	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000	COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
PIBGAFCF_00706	1.81e-173	thiG	2.8.1.10	-	H	ko:K03149	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
PIBGAFCF_00707	5.3e-40	thiS	-	-	H	ko:K03154	ko04122,map04122	ko00000,ko00001	Thiamine biosynthesis
PIBGAFCF_00708	8.33e-255	thiO	1.4.3.19, 1.4.5.1	-	E	ko:K00285,ko:K03153	ko00360,ko00730,ko01100,map00360,map00730,map01100	ko00000,ko00001,ko01000	Glycine oxidase
PIBGAFCF_00709	2.91e-132	tenI	5.3.99.10	-	H	ko:K10810	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03000	Transcriptional regulator TenI
PIBGAFCF_00710	2.06e-170	tenA	3.5.99.2	-	K	ko:K03707	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03000	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
PIBGAFCF_00711	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PIBGAFCF_00712	1.1e-176	prpE	3.1.3.16, 3.6.1.41	-	T	ko:K01090,ko:K01525	ko00230,map00230	ko00000,ko00001,ko01000	Asymmetrically hydrolyzes Ap4p to yield AMP and ATP
PIBGAFCF_00713	2.7e-201	rluD	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
PIBGAFCF_00714	6.92e-193	nadK	2.7.1.23	-	G	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PIBGAFCF_00715	3.67e-138	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	GTP pyrophosphokinase
PIBGAFCF_00716	3.37e-79	yjbL	-	-	S	-	-	-	Belongs to the UPF0738 family
PIBGAFCF_00717	8.1e-118	yjbK	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_00718	1.15e-138	yjbJ	-	-	M	-	-	-	COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
PIBGAFCF_00719	6.79e-91	yjbI	-	-	S	ko:K06886	-	ko00000	Bacterial-like globin
PIBGAFCF_00720	9.23e-215	yjbH	-	-	Q	-	-	-	dithiol-disulfide isomerase involved in polyketide biosynthesis
PIBGAFCF_00721	3.14e-27	-	-	-	-	-	-	-	-
PIBGAFCF_00722	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
PIBGAFCF_00723	1.14e-256	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
PIBGAFCF_00724	2.3e-148	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC
PIBGAFCF_00725	2.28e-140	yjbE	-	-	P	-	-	-	Integral membrane protein TerC family
PIBGAFCF_00726	2.47e-88	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PIBGAFCF_00727	1.04e-130	yjbC	-	-	K	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PIBGAFCF_00728	3.04e-280	-	-	-	S	-	-	-	Putative glycosyl hydrolase domain
PIBGAFCF_00729	1e-216	oppF	-	-	E	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PIBGAFCF_00730	1.96e-252	oppD	-	-	P	ko:K02031,ko:K15583,ko:K16202	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PIBGAFCF_00731	2.95e-209	oppC	-	-	EP	ko:K15582,ko:K16201	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PIBGAFCF_00732	2.08e-212	oppB	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PIBGAFCF_00733	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
PIBGAFCF_00734	8.74e-235	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Tryptophanyl-tRNA synthetase
PIBGAFCF_00735	5.28e-189	yjbA	-	-	S	-	-	-	Belongs to the UPF0736 family
PIBGAFCF_00736	7.81e-209	appC	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PIBGAFCF_00737	8.55e-219	appB	-	-	P	ko:K02033	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PIBGAFCF_00738	0.0	appA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0747 ABC-type dipeptide transport system, periplasmic component
PIBGAFCF_00739	4.48e-232	appF	-	-	E	ko:K02032,ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PIBGAFCF_00740	1.81e-226	appD	-	-	P	ko:K02031,ko:K15583,ko:K16202	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PIBGAFCF_00741	2.47e-179	yjaZ	-	-	O	-	-	-	Zn-dependent protease
PIBGAFCF_00742	1.24e-296	fabF	2.3.1.179	-	I	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PIBGAFCF_00743	1.26e-218	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PIBGAFCF_00744	1.46e-37	yjzB	-	-	-	-	-	-	-
PIBGAFCF_00745	3.74e-36	comZ	-	-	S	ko:K02254	-	ko00000,ko02044	ComZ
PIBGAFCF_00746	8.66e-209	med	-	-	S	ko:K05519,ko:K07335	-	ko00000,ko03000	Transcriptional activator protein med
PIBGAFCF_00747	7.04e-127	yjaV	-	-	-	-	-	-	-
PIBGAFCF_00748	6.32e-169	yjaU	-	-	I	-	-	-	carboxylic ester hydrolase activity
PIBGAFCF_00749	3.71e-31	yjzD	-	-	S	-	-	-	Protein of unknown function (DUF2929)
PIBGAFCF_00750	2.07e-38	yjzC	-	-	S	-	-	-	YjzC-like protein
PIBGAFCF_00751	1.78e-220	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PIBGAFCF_00752	0.0	carB	6.3.5.5	-	EF	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase ammonia chain
PIBGAFCF_00753	9.26e-248	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
PIBGAFCF_00754	5.32e-266	argD	2.6.1.11, 2.6.1.17	-	E	ko:K00821	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	acetylornithine aminotransferase
PIBGAFCF_00755	3.58e-166	argB	2.7.2.8	-	F	ko:K00930	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the acetylglutamate kinase family. ArgB subfamily
PIBGAFCF_00756	4.35e-282	argJ	2.3.1.1, 2.3.1.35	-	E	ko:K00620	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PIBGAFCF_00757	4.41e-247	argC	1.2.1.38	-	E	ko:K00145	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PIBGAFCF_00758	4.44e-117	yitZ	-	-	G	-	-	-	Major Facilitator Superfamily
PIBGAFCF_00759	0.0	yitY	-	-	C	-	-	-	D-arabinono-1,4-lactone oxidase
PIBGAFCF_00760	3.29e-92	fosB	-	-	H	ko:K11210,ko:K21252	-	ko00000,ko01000,ko01504	Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor
PIBGAFCF_00761	3.26e-68	yitW	-	-	S	-	-	-	metal-sulfur cluster biosynthetic enzyme
PIBGAFCF_00762	1.98e-182	yitV	-	-	S	ko:K06889	-	ko00000	COG1073 Hydrolases of the alpha beta superfamily
PIBGAFCF_00763	3.84e-192	-	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sucrose-6F-phosphate phosphohydrolase
PIBGAFCF_00764	1.49e-11	-	-	-	-	-	-	-	-
PIBGAFCF_00765	4.3e-36	-	-	-	S	-	-	-	Protein of unknown function (DUF3813)
PIBGAFCF_00766	3.05e-104	ipi	-	-	S	-	-	-	Intracellular proteinase inhibitor
PIBGAFCF_00767	4.62e-189	yitT	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2179)
PIBGAFCF_00768	8.05e-196	yitS	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_00769	4.22e-293	cypC	1.11.2.4	-	Q	ko:K15629	-	ko00000,ko00199,ko01000	Cytochrome P450
PIBGAFCF_00770	1.06e-288	yvaQ	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PIBGAFCF_00771	2.3e-186	-	-	-	S	ko:K07335	-	ko00000	ABC transporter substrate-binding protein PnrA-like
PIBGAFCF_00772	3.3e-199	yitL	-	-	S	ko:K00243	-	ko00000	protein conserved in bacteria
PIBGAFCF_00773	7.44e-78	yitK	-	-	S	ko:K09767	-	ko00000	Belongs to the UPF0234 family
PIBGAFCF_00774	0.0	yitJ	1.5.1.20, 2.1.1.10	-	E	ko:K00297,ko:K00547	ko00270,ko00670,ko00720,ko01100,ko01110,ko01120,ko01200,ko01523,map00270,map00670,map00720,map01100,map01110,map01120,map01200,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine
PIBGAFCF_00775	6.78e-100	-	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
PIBGAFCF_00776	9.1e-82	yisX	-	-	S	-	-	-	Pentapeptide repeats (9 copies)
PIBGAFCF_00777	1.72e-232	yisV	-	-	K	ko:K18907	-	ko00000,ko00002,ko01504,ko03000	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PIBGAFCF_00778	8.48e-96	argO	-	-	S	ko:K06895	-	ko00000,ko02000	Lysine exporter protein LysE YggA
PIBGAFCF_00779	3.26e-100	yisT	-	-	S	-	-	-	DinB family
PIBGAFCF_00780	2.32e-195	yisS	1.1.1.18, 1.1.1.369, 1.1.1.370	-	S	ko:K00010,ko:K16043	ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130	ko00000,ko00001,ko01000	Oxidoreductase family, C-terminal alpha/beta domain
PIBGAFCF_00781	3.87e-179	rbsR	-	-	K	ko:K02529,ko:K03484	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PIBGAFCF_00782	1.77e-201	yisR	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_00783	9.76e-307	yisQ	-	-	V	-	-	-	Mate efflux family protein
PIBGAFCF_00784	6.09e-150	crtM	2.5.1.32, 2.5.1.99	-	I	ko:K02291	ko00906,ko01062,ko01100,ko01110,map00906,map01062,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	phytoene
PIBGAFCF_00785	0.0	asnO	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
PIBGAFCF_00786	5.25e-115	yisN	-	-	S	-	-	-	Protein of unknown function (DUF2777)
PIBGAFCF_00787	0.0	wprA	-	-	O	ko:K13274	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
PIBGAFCF_00788	4.48e-78	yisL	-	-	S	-	-	-	UPF0344 protein
PIBGAFCF_00789	2.25e-211	yisK	-	-	Q	-	-	-	COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
PIBGAFCF_00790	2.45e-13	yisI	-	-	S	-	-	-	Spo0E like sporulation regulatory protein
PIBGAFCF_00791	1.28e-45	gerPA	-	-	S	ko:K06299	-	ko00000	Spore germination protein
PIBGAFCF_00792	7.71e-42	gerPB	-	-	S	ko:K06300	-	ko00000	cell differentiation
PIBGAFCF_00793	9.39e-104	gerPC	-	-	S	ko:K06301	-	ko00000	Spore germination protein
PIBGAFCF_00794	1.44e-31	gerPD	-	-	S	ko:K06302	-	ko00000	Spore germination protein
PIBGAFCF_00795	2.37e-77	gerPE	-	-	S	ko:K06303	-	ko00000	Spore germination protein GerPE
PIBGAFCF_00796	5.49e-42	gerPF	-	-	S	ko:K06299,ko:K06304	-	ko00000	Spore germination protein gerPA/gerPF
PIBGAFCF_00797	8.91e-64	yisB	-	-	V	-	-	-	COG1403 Restriction endonuclease
PIBGAFCF_00798	0.0	sbcC	-	-	L	ko:K03546	-	ko00000,ko03400	COG0419 ATPase involved in DNA repair
PIBGAFCF_00799	7.47e-280	sbcD	-	-	L	ko:K03547	-	ko00000,ko03400	SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PIBGAFCF_00800	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
PIBGAFCF_00801	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	ATP-dependent helicase deoxyribonuclease subunit B
PIBGAFCF_00802	8.81e-152	ydfS	-	-	S	-	-	-	Protein of unknown function (DUF421)
PIBGAFCF_00803	3.47e-108	yhjR	-	-	S	-	-	-	Rubrerythrin
PIBGAFCF_00804	1.24e-138	-	-	-	K	-	-	-	QacR-like protein, C-terminal region
PIBGAFCF_00805	1.56e-260	blt	-	-	EGP	ko:K08153	-	ko00000,ko00002,ko02000	COG0477 Permeases of the major facilitator superfamily
PIBGAFCF_00806	2.03e-254	yhjN	-	-	S	ko:K07120	-	ko00000	membrane
PIBGAFCF_00807	9.88e-120	yhjH	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PIBGAFCF_00808	0.0	yhjG	-	-	CH	-	-	-	FAD binding domain
PIBGAFCF_00809	1.3e-116	spsB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PIBGAFCF_00810	8.02e-136	yhjE	-	-	S	-	-	-	SNARE associated Golgi protein
PIBGAFCF_00811	2.3e-76	yhjD	-	-	-	-	-	-	-
PIBGAFCF_00812	5.59e-37	yhjC	-	-	S	-	-	-	Protein of unknown function (DUF3311)
PIBGAFCF_00813	0.0	yhjB	-	-	E	ko:K03307	-	ko00000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PIBGAFCF_00814	2.64e-63	-	-	-	S	-	-	-	Belongs to the UPF0145 family
PIBGAFCF_00815	7.11e-57	yhjA	-	-	S	-	-	-	Excalibur calcium-binding domain
PIBGAFCF_00816	3.92e-157	yrpD	-	-	S	-	-	-	Domain of unknown function, YrpD
PIBGAFCF_00817	1.28e-213	-	-	-	S	-	-	-	Acetyltransferase, GNAT family
PIBGAFCF_00818	4.21e-74	frataxin	-	-	S	ko:K05937	-	ko00000	Domain of unknown function (DU1801)
PIBGAFCF_00819	2.19e-141	comK	-	-	K	ko:K02250	ko02024,map02024	ko00000,ko00001,ko02044,ko03000	Competence transcription factor
PIBGAFCF_00820	5.49e-42	yhzC	-	-	S	-	-	-	IDEAL
PIBGAFCF_00821	2.73e-204	yhxC	-	-	IQ	-	-	-	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PIBGAFCF_00822	0.0	yhfW	-	-	CE	-	-	-	COG0665 Glycine D-amino acid oxidases (deaminating)
PIBGAFCF_00823	2.43e-271	hemAT	-	-	NT	ko:K06595	-	ko00000,ko02035	chemotaxis protein
PIBGAFCF_00824	2.32e-110	bioY	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	BioY family
PIBGAFCF_00825	0.0	vraA	6.2.1.3	-	IQ	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	AMP-binding enzyme C-terminal domain
PIBGAFCF_00826	8.49e-245	yhfS	2.3.1.9	-	I	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
PIBGAFCF_00827	4.57e-129	yhfR	5.4.2.12	-	G	ko:K15634,ko:K15640	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the phosphoglycerate mutase family
PIBGAFCF_00828	1.78e-163	-	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG4594 ABC-type Fe3 -citrate transport system, periplasmic component
PIBGAFCF_00829	1.24e-258	aprE	3.4.21.62	-	O	ko:K01342,ko:K13277	ko02024,map02024	ko00000,ko00001,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
PIBGAFCF_00830	1.33e-293	yhfN	-	-	O	-	-	-	Peptidase M48
PIBGAFCF_00831	9.31e-84	yhfM	-	-	-	-	-	-	-
PIBGAFCF_00832	0.0	yhfL	6.2.1.3	-	IQ	ko:K00666,ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	AMP-binding enzyme C-terminal domain
PIBGAFCF_00833	3.92e-137	yhfK	-	-	GM	-	-	-	NmrA-like family
PIBGAFCF_00834	1.07e-240	lplJ	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Lipoate-protein ligase
PIBGAFCF_00835	2.4e-173	yhfI	-	-	S	-	-	-	COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III
PIBGAFCF_00836	3.75e-286	gltT	-	-	C	ko:K03309,ko:K11102,ko:K11103	ko02020,map02020	ko00000,ko00001,ko02000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PIBGAFCF_00837	1.66e-247	yhfE	-	-	G	-	-	-	peptidase M42
PIBGAFCF_00839	2.04e-226	fabHB	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PIBGAFCF_00840	0.0	yhgE	-	-	S	ko:K01421	-	ko00000	YhgE Pip N-terminal domain protein
PIBGAFCF_00841	5.15e-130	yhgD	-	-	K	ko:K09017	-	ko00000,ko03000	Transcriptional regulator
PIBGAFCF_00842	0.0	hemY	1.3.3.15, 1.3.3.4	-	H	ko:K00231	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
PIBGAFCF_00843	3.4e-227	hemH	4.99.1.1, 4.99.1.9	-	H	ko:K01772	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the ferrous insertion into protoporphyrin IX
PIBGAFCF_00844	9.19e-253	hemE	4.1.1.37	-	H	ko:K01599	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
PIBGAFCF_00845	0.0	pbpF	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
PIBGAFCF_00846	2.98e-115	traP	1.14.99.57	-	S	ko:K21481	-	ko00000,ko01000	enzyme involved in biosynthesis of extracellular polysaccharides
PIBGAFCF_00847	1.65e-303	yhfA	-	-	C	-	-	-	membrane
PIBGAFCF_00848	1.68e-274	yhaA	-	-	E	ko:K01436	-	ko00000,ko01000,ko01002	COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
PIBGAFCF_00849	9.96e-152	ecsC	-	-	S	-	-	-	EcsC protein family
PIBGAFCF_00850	3.4e-276	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
PIBGAFCF_00851	2.13e-173	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	transporter (ATP-binding protein)
PIBGAFCF_00852	5.82e-105	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
PIBGAFCF_00853	1.49e-252	serC	2.6.1.52	-	E	ko:K00831	ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PIBGAFCF_00854	5.77e-96	trpP	-	-	S	-	-	-	Tryptophan transporter TrpP
PIBGAFCF_00855	2.55e-24	-	-	-	-	-	-	-	-
PIBGAFCF_00856	1.58e-53	yhaH	-	-	S	-	-	-	YtxH-like protein
PIBGAFCF_00857	1.07e-142	hpr	-	-	K	ko:K09682	-	ko00000,ko03000	Negative regulator of protease production and sporulation
PIBGAFCF_00858	1.2e-72	yhaI	-	-	S	-	-	-	Protein of unknown function (DUF1878)
PIBGAFCF_00859	4.32e-122	yhaK	-	-	S	-	-	-	Putative zincin peptidase
PIBGAFCF_00860	3.2e-182	prsA	5.2.1.8	-	M	ko:K01802,ko:K07533	-	ko00000,ko01000,ko03110	plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PIBGAFCF_00861	8.23e-43	yhaL	-	-	S	-	-	-	Sporulation protein YhaL
PIBGAFCF_00862	3.38e-224	yhaM	-	-	L	ko:K03698	-	ko00000,ko01000,ko03019	Shows a 3'-5' exoribonuclease activity
PIBGAFCF_00863	0.0	yhaN	-	-	L	-	-	-	AAA domain
PIBGAFCF_00864	3.8e-293	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	DNA repair exonuclease
PIBGAFCF_00865	2.67e-274	yhaP	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	COG1668 ABC-type Na efflux pump, permease component
PIBGAFCF_00866	3.45e-209	yhaQ	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PIBGAFCF_00867	1.21e-20	-	-	-	S	-	-	-	YhzD-like protein
PIBGAFCF_00868	4.59e-172	yhaR	-	-	I	-	-	-	enoyl-CoA hydratase
PIBGAFCF_00870	6.25e-112	-	-	-	P	ko:K07228	-	ko00000	regulatory, ligand-binding protein related to C-terminal domains of K channels
PIBGAFCF_00871	9.07e-263	yhaU	-	-	P	ko:K03455	-	ko00000	COG0475 Kef-type K transport systems, membrane components
PIBGAFCF_00872	1.48e-311	-	1.14.13.59	-	Q	ko:K03897	ko00310,ko01120,map00310,map01120	ko00000,ko00001,ko01000	L-lysine 6-monooxygenase (NADPH-requiring)
PIBGAFCF_00873	0.0	hemZ	-	-	H	-	-	-	coproporphyrinogen III oxidase
PIBGAFCF_00874	2.49e-197	yhaX	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
PIBGAFCF_00875	5.48e-69	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
PIBGAFCF_00876	8.97e-254	yheB	-	-	S	-	-	-	Belongs to the UPF0754 family
PIBGAFCF_00877	2.7e-257	yheC	-	-	HJ	-	-	-	YheC/D like ATP-grasp
PIBGAFCF_00878	5.52e-316	yheD	-	-	HJ	-	-	-	YheC/D like ATP-grasp
PIBGAFCF_00879	2.12e-49	yheE	-	-	S	-	-	-	Family of unknown function (DUF5342)
PIBGAFCF_00880	3.86e-38	sspB	-	-	S	ko:K06418,ko:K06419	-	ko00000	spore protein
PIBGAFCF_00882	9.64e-127	yheG	-	-	GM	-	-	-	NAD(P)H-binding
PIBGAFCF_00883	0.0	yheH	-	-	V	ko:K18217,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko01504,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
PIBGAFCF_00884	0.0	yheI	-	-	V	ko:K18216,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko01504,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
PIBGAFCF_00885	3.96e-107	-	-	-	T	-	-	-	universal stress protein
PIBGAFCF_00886	1.17e-118	ymcC	-	-	S	-	-	-	Membrane
PIBGAFCF_00887	9.13e-126	pksA	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_00888	1.05e-191	dat	2.6.1.21	-	E	ko:K00824	ko00310,ko00330,ko00360,ko00472,ko00473,ko01100,map00310,map00330,map00360,map00472,map00473,map01100	ko00000,ko00001,ko01000,ko01007	Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha- keto acid in the first half-reaction
PIBGAFCF_00889	6.85e-192	nodB1	-	-	G	-	-	-	deacetylase
PIBGAFCF_00890	3.53e-172	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form
PIBGAFCF_00891	5.39e-252	yhdY	-	-	M	ko:K16052	-	ko00000,ko02000	Mechanosensitive ion channel
PIBGAFCF_00892	1.45e-08	yhdX	-	-	S	-	-	-	Uncharacterized protein YhdX
PIBGAFCF_00893	1.26e-156	yhdW	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
PIBGAFCF_00894	4.22e-71	crcB	-	-	D	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PIBGAFCF_00895	1.68e-69	crcB	-	-	D	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PIBGAFCF_00896	5.48e-314	yhdT	-	-	P	-	-	-	COG1253 Hemolysins and related proteins containing CBS domains
PIBGAFCF_00897	7.35e-290	-	2.3.1.179	-	I	ko:K00646,ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PIBGAFCF_00898	2.3e-276	yhdR	2.6.1.1	-	E	ko:K11358	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase
PIBGAFCF_00899	2.3e-91	cueR	-	-	K	ko:K11923	-	ko00000,ko03000	transcriptional
PIBGAFCF_00900	2.66e-305	yhdP	-	-	S	-	-	-	COG1253 Hemolysins and related proteins containing CBS domains
PIBGAFCF_00901	4.04e-136	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
PIBGAFCF_00902	4.6e-113	sigM	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PIBGAFCF_00903	2.03e-249	yhdL	-	-	S	-	-	-	Sigma factor regulator N-terminal
PIBGAFCF_00904	8.62e-59	yhdK	-	-	S	-	-	-	Sigma-M inhibitor protein
PIBGAFCF_00905	4.63e-264	yhdH	-	-	S	ko:K03308	-	ko00000	Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
PIBGAFCF_00906	1.1e-311	yhdG	-	-	E	ko:K03294	-	ko00000	amino acid
PIBGAFCF_00907	3.42e-200	yhdF	-	-	IQ	-	-	-	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PIBGAFCF_00908	3.63e-249	citA	2.3.3.1	-	C	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Belongs to the citrate synthase family
PIBGAFCF_00909	1.7e-201	citR	-	-	K	ko:K19242	-	ko00000,ko03000	Transcriptional regulator
PIBGAFCF_00910	2.28e-166	lytE	-	CBM50	M	ko:K19220,ko:K19223,ko:K19224	-	ko00000,ko01000,ko01002,ko01011	COG1388 FOG LysM repeat
PIBGAFCF_00911	0.0	phoB	3.1.3.1	-	P	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	Belongs to the alkaline phosphatase family
PIBGAFCF_00912	0.0	spoVR	-	-	S	ko:K06415	-	ko00000	Stage V sporulation protein R
PIBGAFCF_00913	2.06e-41	ygxB	-	-	M	-	-	-	Conserved TM helix
PIBGAFCF_00914	1.77e-226	ygxB	-	-	M	-	-	-	Conserved TM helix
PIBGAFCF_00915	1.49e-93	nsrR	-	-	K	ko:K13771	ko05132,map05132	ko00000,ko00001,ko03000	Transcriptional regulator
PIBGAFCF_00916	1.69e-282	lytF	-	CBM50	M	ko:K19220,ko:K19223,ko:K19224	-	ko00000,ko01000,ko01002,ko01011	COG1388 FOG LysM repeat
PIBGAFCF_00917	2.33e-68	yhdC	-	-	S	-	-	-	Protein of unknown function (DUF3889)
PIBGAFCF_00918	1.16e-51	yhdB	-	-	S	-	-	-	YhdB-like protein
PIBGAFCF_00919	2.89e-108	yhdA	1.7.1.6	-	S	ko:K03206	-	ko00000,ko01000	NADPH-dependent FMN reductase
PIBGAFCF_00920	1.88e-137	yhcZ	-	-	K	ko:K02479	-	ko00000,ko02022	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PIBGAFCF_00921	1.11e-246	yhcY	2.7.13.3	-	T	ko:K02480	-	ko00000,ko01000,ko01001,ko02022	Histidine kinase
PIBGAFCF_00922	0.0	pgcA	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase
PIBGAFCF_00923	0.0	glpD	1.1.3.21, 1.1.5.3	-	C	ko:K00105,ko:K00111	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
PIBGAFCF_00924	0.0	glpK	2.7.1.30	-	C	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PIBGAFCF_00925	5.86e-92	glpF	-	-	G	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
PIBGAFCF_00926	1.23e-84	glpF	-	-	G	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
PIBGAFCF_00927	2.26e-129	glpP	-	-	K	ko:K02443	-	ko00000,ko03000	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
PIBGAFCF_00928	0.0	yhxA	-	-	E	-	-	-	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PIBGAFCF_00929	0.0	yhcX	-	-	K	-	-	-	Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
PIBGAFCF_00930	1.33e-158	yhcW	-	-	S	ko:K07025	-	ko00000	hydrolase
PIBGAFCF_00931	5.88e-89	yhcV	-	-	S	-	-	-	COG0517 FOG CBS domain
PIBGAFCF_00932	1.88e-83	yhcU	-	-	S	-	-	-	Family of unknown function (DUF5365)
PIBGAFCF_00933	2.24e-207	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
PIBGAFCF_00934	3.17e-128	yhcS	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	COG3764 Sortase (surface protein transpeptidase)
PIBGAFCF_00935	0.0	yhcR	3.1.3.5, 3.1.3.6, 3.1.4.16	-	F	ko:K01081,ko:K01119,ko:K08693	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PIBGAFCF_00936	2.2e-149	yhcQ	-	-	M	-	-	-	Spore coat protein
PIBGAFCF_00937	1.63e-198	yhcP	-	-	-	-	-	-	-
PIBGAFCF_00938	6.26e-101	yhcN	-	-	S	-	-	-	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PIBGAFCF_00939	5.08e-60	yhcM	-	-	-	-	-	-	-
PIBGAFCF_00940	1.79e-49	-	3.5.1.6, 3.5.1.87	-	E	ko:K06016	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases
PIBGAFCF_00941	1.01e-290	tcyP	-	-	U	ko:K06956	-	ko00000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PIBGAFCF_00942	2.76e-230	yhcK	2.7.7.65	-	T	ko:K18967	-	ko00000,ko01000,ko02000	COG2199 FOG GGDEF domain
PIBGAFCF_00943	6.9e-161	metQ_3	-	-	M	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
PIBGAFCF_00944	7.28e-42	cspB	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
PIBGAFCF_00945	7.61e-201	yhcI	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
PIBGAFCF_00946	3.59e-210	yhcH	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PIBGAFCF_00947	8.89e-147	yhcG	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PIBGAFCF_00948	3.06e-77	yhcF	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator
PIBGAFCF_00949	7.54e-65	-	-	-	-	-	-	-	-
PIBGAFCF_00950	1.03e-65	yhcC	-	-	-	-	-	-	-
PIBGAFCF_00951	2.61e-128	wrbA	1.6.5.2	-	S	ko:K03809	ko00130,ko01110,map00130,map01110	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
PIBGAFCF_00952	0.0	yhcA	-	-	EGP	ko:K03446	-	ko00000,ko00002,ko02000	the major facilitator superfamily
PIBGAFCF_00953	1.21e-129	yhbJ	-	-	V	-	-	-	COG1566 Multidrug resistance efflux pump
PIBGAFCF_00954	5.43e-94	yhbI	-	-	K	ko:K15973	-	ko00000,ko03000	DNA-binding transcription factor activity
PIBGAFCF_00955	2.12e-276	yhbH	-	-	S	ko:K09786	-	ko00000	Belongs to the UPF0229 family
PIBGAFCF_00956	0.0	prkA	-	-	T	ko:K07180	-	ko00000	Ser protein kinase
PIBGAFCF_00957	1.23e-07	-	-	-	-	-	-	-	-
PIBGAFCF_00958	7.48e-85	yhbF	-	-	M	-	-	-	COG1664 Integral membrane protein CcmA involved in cell shape determination
PIBGAFCF_00959	2.51e-76	yhbE	-	-	M	-	-	-	COG1664 Integral membrane protein CcmA involved in cell shape determination
PIBGAFCF_00960	3.35e-132	yhbD	-	-	K	-	-	-	Protein of unknown function (DUF4004)
PIBGAFCF_00961	2.31e-110	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PIBGAFCF_00962	8.37e-216	yhbB	-	-	S	-	-	-	Putative amidase domain
PIBGAFCF_00963	2.14e-280	queG	1.17.99.6	-	C	ko:K18979	-	ko00000,ko01000,ko03016	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PIBGAFCF_00964	1.34e-138	yhzB	-	-	S	-	-	-	B3/4 domain
PIBGAFCF_00966	5.45e-31	-	-	-	K	ko:K07729	-	ko00000,ko03000	Transcriptional regulator
PIBGAFCF_00967	2.81e-101	ygaO	-	-	-	-	-	-	-
PIBGAFCF_00968	1.62e-53	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PIBGAFCF_00970	1.37e-269	ssuD	1.14.14.28, 1.14.14.5	-	C	ko:K04091,ko:K20938	ko00920,map00920	ko00000,ko00001,ko01000	Catalyzes the desulfonation of aliphatic sulfonates
PIBGAFCF_00971	6.5e-183	ssuC	-	-	P	ko:K15554	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter (permease)
PIBGAFCF_00972	2.34e-218	ssuA	-	-	M	ko:K15553	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	Sulfonate ABC transporter
PIBGAFCF_00973	1.02e-176	ssuB	-	-	P	ko:K15555	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component
PIBGAFCF_00974	1.61e-225	-	-	-	S	ko:K07045	-	ko00000	Amidohydrolase
PIBGAFCF_00975	0.0	katA	1.11.1.6	-	P	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	ko00000,ko00001,ko00002,ko01000	serves to protect cells from the toxic effects of hydrogen peroxide
PIBGAFCF_00976	5.17e-165	oppF9	-	-	E	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PIBGAFCF_00977	5.45e-170	oppD3	-	-	P	ko:K02031	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PIBGAFCF_00978	6.2e-162	-	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PIBGAFCF_00979	2.33e-185	-	-	-	P	ko:K02033	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PIBGAFCF_00980	1.69e-291	oppA5	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	PFAM extracellular solute-binding protein family 5
PIBGAFCF_00982	3.15e-313	ygaK	-	-	C	-	-	-	Berberine and berberine like
PIBGAFCF_00983	0.0	thiC	4.1.99.17	-	H	ko:K03147	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PIBGAFCF_00984	2.38e-158	ygaJ	3.4.13.21	-	E	ko:K05995	-	ko00000,ko01000,ko01002	Belongs to the peptidase S51 family
PIBGAFCF_00985	0.0	-	-	-	C	-	-	-	Na+/H+ antiporter family
PIBGAFCF_01004	1.31e-20	yqaO	-	-	S	-	-	-	Phage-like element PBSX protein XtrA
PIBGAFCF_01005	2.19e-05	-	-	-	-	-	-	-	-
PIBGAFCF_01008	2.97e-36	-	-	-	-	-	-	-	-
PIBGAFCF_01009	3.73e-11	-	-	-	-	-	-	-	-
PIBGAFCF_01011	4.95e-22	-	-	-	L	ko:K02315	-	ko00000,ko03032	IstB-like ATP binding protein
PIBGAFCF_01012	5.17e-100	-	-	-	L	-	-	-	dnaD_dom DnaD domain protein
PIBGAFCF_01014	6.41e-50	-	-	-	S	-	-	-	Domain of unknown function (DUF771)
PIBGAFCF_01015	1.84e-18	-	-	-	S	-	-	-	sequence-specific DNA binding
PIBGAFCF_01016	2.7e-07	-	-	-	K	-	-	-	Helix-turn-helix domain protein
PIBGAFCF_01017	6.93e-38	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PIBGAFCF_01019	1.03e-84	-	-	-	-	-	-	-	-
PIBGAFCF_01020	5.51e-162	-	-	-	S	-	-	-	Phage integrase family
PIBGAFCF_01022	4.85e-107	smpB	-	-	O	ko:K03664	-	ko00000	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
PIBGAFCF_01023	0.0	rnr	-	-	K	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PIBGAFCF_01024	6.92e-183	est	3.1.1.1	-	S	ko:K03928	-	ko00000,ko01000	Carboxylesterase
PIBGAFCF_01025	9.24e-36	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase subunit SecG
PIBGAFCF_01026	1.64e-47	yvzC	-	-	K	-	-	-	transcriptional
PIBGAFCF_01027	1.07e-89	yvaO	-	-	K	ko:K22299	-	ko00000,ko03000	transcriptional
PIBGAFCF_01028	1.09e-90	yvaO	-	-	K	ko:K22299	-	ko00000,ko03000	Cro/C1-type HTH DNA-binding domain
PIBGAFCF_01029	1.17e-67	yvaP	-	-	K	-	-	-	transcriptional
PIBGAFCF_01030	3.51e-308	spaK	2.7.13.3	-	T	ko:K20487	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	His Kinase A (phosphoacceptor) domain
PIBGAFCF_01031	7.17e-154	spaR	-	-	K	ko:K20488	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C terminal
PIBGAFCF_01032	1.93e-167	spaG	-	-	S	ko:K20492	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko00002,ko02000	ABC-2 family transporter protein
PIBGAFCF_01033	1.35e-154	spaE	-	-	S	ko:K20491	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko00002,ko02000	ABC-2 family transporter protein
PIBGAFCF_01034	1.73e-158	spaF	-	-	V	ko:K01990,ko:K20459,ko:K20490	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PIBGAFCF_01035	4.05e-142	opuCD	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1174 ABC-type proline glycine betaine transport systems, permease component
PIBGAFCF_01036	4.75e-215	opuCC	-	-	M	ko:K05845	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1732 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PIBGAFCF_01037	2.57e-141	opuCB	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1174 ABC-type proline glycine betaine transport systems, permease component
PIBGAFCF_01038	1.39e-259	opuCA	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1125 ABC-type proline glycine betaine transport systems, ATPase components
PIBGAFCF_01039	3.42e-124	-	-	-	K	ko:K22301	-	ko00000,ko03000	Belongs to the GbsR family
PIBGAFCF_01040	2.08e-139	opuCD	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1174 ABC-type proline glycine betaine transport systems, permease component
PIBGAFCF_01041	6.03e-218	opuCC	-	-	M	ko:K05845	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1732 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PIBGAFCF_01042	3.12e-142	opuCB	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1174 ABC-type proline glycine betaine transport systems, permease component
PIBGAFCF_01043	7.33e-270	opuCA	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1125 ABC-type proline glycine betaine transport systems, ATPase components
PIBGAFCF_01044	1.88e-125	-	-	-	K	ko:K22301	-	ko00000,ko03000	Belongs to the GbsR family
PIBGAFCF_01045	4.44e-134	yvbG	-	-	U	ko:K05595	-	ko00000,ko02000	UPF0056 membrane protein
PIBGAFCF_01046	5.38e-142	yvbI	-	-	M	-	-	-	Membrane
PIBGAFCF_01047	0.0	tcaA	-	-	S	ko:K21463	-	ko00000	response to antibiotic
PIBGAFCF_01048	1.24e-103	yvbK	-	-	K	-	-	-	acetyltransferase
PIBGAFCF_01049	4.16e-260	-	-	-	EGP	-	-	-	Major facilitator Superfamily
PIBGAFCF_01050	1.87e-219	-	-	-	-	-	-	-	-
PIBGAFCF_01051	3.54e-159	-	-	-	S	-	-	-	GlcNAc-PI de-N-acetylase
PIBGAFCF_01052	1.13e-182	-	-	-	C	-	-	-	WbqC-like protein family
PIBGAFCF_01053	2.49e-179	-	-	-	M	-	-	-	Protein involved in cellulose biosynthesis
PIBGAFCF_01054	5.44e-278	-	-	-	E	-	-	-	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
PIBGAFCF_01055	6.48e-215	arnA	4.2.1.46, 5.1.3.2	-	M	ko:K01710,ko:K01784	ko00052,ko00520,ko00521,ko00523,ko00525,ko01055,ko01100,ko01130,map00052,map00520,map00521,map00523,map00525,map01055,map01100,map01130	ko00000,ko00001,ko00002,ko01000	GDP-mannose 4,6 dehydratase
PIBGAFCF_01056	2.68e-275	-	2.6.1.102	-	E	ko:K13010	ko00520,map00520	ko00000,ko00001,ko01000,ko01005,ko01007	Belongs to the DegT DnrJ EryC1 family
PIBGAFCF_01057	9.36e-317	-	1.1.1.136	-	M	ko:K13015	ko00520,map00520	ko00000,ko00001,ko01000,ko01005	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PIBGAFCF_01058	2.83e-286	ywaD	3.4.11.10, 3.4.11.6	-	S	ko:K19701	-	ko00000,ko01000,ko01002	PA domain
PIBGAFCF_01059	9.69e-310	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PIBGAFCF_01060	0.0	gpmI	5.4.2.12	-	G	ko:K15633	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of 2-phosphoglycerate and
PIBGAFCF_01061	1.49e-176	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PIBGAFCF_01062	1.55e-274	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
PIBGAFCF_01063	2.83e-238	gapA	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PIBGAFCF_01064	1.91e-236	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain
PIBGAFCF_01066	1.08e-270	araE	-	-	U	ko:K02100,ko:K06609	-	ko00000,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PIBGAFCF_01067	2.91e-256	araR	-	-	K	ko:K02103	-	ko00000,ko03000	transcriptional
PIBGAFCF_01068	1.78e-241	yvbT	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PIBGAFCF_01069	3.86e-18	yvbU	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_01070	2.18e-124	yvbU	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_01071	5.35e-196	yvbV	-	-	EG	-	-	-	EamA-like transporter family
PIBGAFCF_01072	6.69e-275	yvbW	-	-	E	ko:K03293	-	ko00000	COG1113 Gamma-aminobutyrate permease and related permeases
PIBGAFCF_01074	2.88e-190	gntR	-	-	K	-	-	-	RpiR family transcriptional regulator
PIBGAFCF_01075	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
PIBGAFCF_01076	3.08e-287	gntP	-	-	EG	ko:K03299	-	ko00000,ko02000	COG2610 H gluconate symporter and related permeases
PIBGAFCF_01077	3.12e-167	lutC	-	-	S	ko:K00782	-	ko00000	Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source
PIBGAFCF_01078	0.0	lutB	-	-	C	ko:K18929	-	ko00000	Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate
PIBGAFCF_01079	1.69e-170	lutA	-	-	C	ko:K18928	-	ko00000	Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source
PIBGAFCF_01080	2.07e-264	-	-	-	EK	ko:K05825	ko00300,ko01100,ko01130,ko01210,map00300,map01100,map01130,map01210	ko00000,ko00001,ko01000	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PIBGAFCF_01081	1.16e-151	yvfI	-	-	K	ko:K05799	-	ko00000,ko03000	COG2186 Transcriptional regulators
PIBGAFCF_01082	0.0	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
PIBGAFCF_01083	1.61e-293	rpoN	-	-	K	ko:K03092	ko02020,ko05111,map02020,map05111	ko00000,ko00001,ko03021	COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog
PIBGAFCF_01084	4.01e-44	yvfG	-	-	S	-	-	-	YvfG protein
PIBGAFCF_01085	2.77e-224	epsO	-	-	GM	ko:K19431	-	ko00000,ko01000	Exopolysaccharide biosynthesis protein
PIBGAFCF_01086	2.79e-275	epsN	-	-	E	ko:K19430	-	ko00000,ko01000	Belongs to the DegT DnrJ EryC1 family
PIBGAFCF_01087	1.28e-70	epsM	-	-	GM	ko:K19429	-	ko00000,ko01000	COG0110 Acetyltransferase (isoleucine patch superfamily)
PIBGAFCF_01088	2.7e-131	epsL	-	-	M	ko:K13012,ko:K19428	-	ko00000,ko01000,ko01005	COG2148 Sugar transferases involved in lipopolysaccharide synthesis
PIBGAFCF_01089	0.0	epsK	-	-	S	ko:K19418	-	ko00000,ko02000	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PIBGAFCF_01090	1.99e-238	epsJ	-	GT2	S	ko:K19427	-	ko00000,ko01000	COG0463 Glycosyltransferases involved in cell wall biogenesis
PIBGAFCF_01091	6.55e-251	epsI	-	-	GM	ko:K19426	-	ko00000,ko01000	pyruvyl transferase
PIBGAFCF_01092	8.53e-245	epsH	-	GT2	S	ko:K19425	-	ko00000,ko01000,ko01003	Glycosyltransferase like family 2
PIBGAFCF_01093	6.38e-258	epsG	-	-	S	ko:K19419	-	ko00000,ko02000	EpsG family
PIBGAFCF_01094	1.95e-253	epsF	-	GT4	M	ko:K19424	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
PIBGAFCF_01095	3.44e-200	epsE	-	GT2	M	ko:K19423	-	ko00000,ko01000,ko01003	COG0463 Glycosyltransferases involved in cell wall biogenesis
PIBGAFCF_01096	4.24e-269	epsD	-	GT4	M	ko:K19422	-	ko00000,ko01000	Glycosyl transferase 4-like
PIBGAFCF_01097	0.0	capD	-	-	GM	ko:K19421	-	ko00000	Polysaccharide biosynthesis protein
PIBGAFCF_01098	8.95e-151	ywqD	2.7.10.2	-	D	ko:K00903	-	ko00000,ko01000,ko01001	COG0489 ATPases involved in chromosome partitioning
PIBGAFCF_01099	4.37e-151	epsA	-	-	M	ko:K19420	-	ko00000	biosynthesis protein
PIBGAFCF_01100	5.95e-101	-	-	-	K	ko:K19417	-	ko00000,ko03000	transcriptional
PIBGAFCF_01101	8.66e-312	pnbA	-	CE10	I	ko:K03929	-	ko00000,ko01000	Belongs to the type-B carboxylesterase lipase family
PIBGAFCF_01103	8.3e-111	ywjB	-	-	H	-	-	-	RibD C-terminal domain
PIBGAFCF_01104	4.2e-164	-	-	-	CH	-	-	-	FAD binding domain
PIBGAFCF_01105	3.18e-97	glx2	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
PIBGAFCF_01106	5.22e-137	yyaS	-	-	S	ko:K07149	-	ko00000	Membrane
PIBGAFCF_01107	3.65e-108	paiA	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PIBGAFCF_01108	7.09e-121	padC	-	-	Q	ko:K13727	-	ko00000,ko01000	Phenolic acid decarboxylase
PIBGAFCF_01109	1.25e-63	-	-	-	S	-	-	-	Protein of unknown function (DUF3237)
PIBGAFCF_01110	3.4e-43	-	-	-	S	-	-	-	Protein of unknown function (DUF1433)
PIBGAFCF_01111	1.63e-30	-	-	-	S	-	-	-	Protein of unknown function (DUF1433)
PIBGAFCF_01112	6.57e-25	-	-	-	S	-	-	-	Protein of unknown function (DUF1433)
PIBGAFCF_01113	0.0	-	-	-	I	-	-	-	Pfam Lipase (class 3)
PIBGAFCF_01114	3.08e-44	-	-	-	-	-	-	-	-
PIBGAFCF_01116	0.0	cscA	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
PIBGAFCF_01117	1.69e-277	rafB	-	-	P	ko:K02532	-	ko00000,ko02000	LacY proton/sugar symporter
PIBGAFCF_01118	2.68e-226	scrR	-	-	K	ko:K02529,ko:K03484	-	ko00000,ko03000	transcriptional
PIBGAFCF_01119	3.74e-136	clpP	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PIBGAFCF_01120	1.4e-202	yraN	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_01121	3.16e-258	yraM	-	-	S	-	-	-	PrpF protein
PIBGAFCF_01122	6.64e-313	-	-	-	EGP	-	-	-	Sugar (and other) transporter
PIBGAFCF_01123	1.06e-110	-	-	-	-	-	-	-	-
PIBGAFCF_01124	1.25e-56	yvdD	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the LOG family
PIBGAFCF_01125	5.98e-66	yvdC	-	-	S	-	-	-	MazG nucleotide pyrophosphohydrolase domain
PIBGAFCF_01126	0.0	yvdB	-	-	P	ko:K03321	-	ko00000,ko02000	COG0659 Sulfate permease and related transporters (MFS superfamily)
PIBGAFCF_01127	8.55e-135	yvdA	4.2.1.1	-	P	ko:K01673	ko00910,map00910	ko00000,ko00001,ko01000	Reversible hydration of carbon dioxide
PIBGAFCF_01128	7.72e-229	yvcT	1.1.1.215, 1.1.1.26, 1.1.1.79, 1.1.1.81	-	CH	ko:K00015,ko:K00090	ko00030,ko00260,ko00620,ko00630,ko01100,ko01110,ko01120,map00030,map00260,map00620,map00630,map01100,map01110,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PIBGAFCF_01129	4.11e-100	-	-	-	M	-	-	-	Ribonuclease
PIBGAFCF_01130	5.8e-167	yvcN	2.3.1.118	-	Q	ko:K00675	-	ko00000,ko01000	Belongs to the arylamine N-acetyltransferase family
PIBGAFCF_01131	6.52e-49	crh	-	-	G	ko:K11184	-	ko00000	Phosphocarrier protein Chr
PIBGAFCF_01132	5.16e-220	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
PIBGAFCF_01133	3.01e-224	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
PIBGAFCF_01134	8.53e-213	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
PIBGAFCF_01135	7.32e-113	yvcI	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes
PIBGAFCF_01136	6.06e-224	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PIBGAFCF_01137	7.8e-192	spl	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	protein conserved in bacteria
PIBGAFCF_01138	0.0	yvcD	-	-	S	-	-	-	COG0457 FOG TPR repeat
PIBGAFCF_01139	1.01e-231	sasA	-	-	T	-	-	-	Histidine kinase
PIBGAFCF_01140	1.49e-153	mprA3	-	-	T	-	-	-	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PIBGAFCF_01141	0.0	lmrA	3.6.3.44	-	V	ko:K02021,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter
PIBGAFCF_01142	8.74e-139	hisI	3.5.4.19, 3.6.1.31	-	E	ko:K01496,ko:K11755	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	belongs to the PRA-CH family
PIBGAFCF_01143	4.63e-175	hisF	-	-	E	ko:K02500	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PIBGAFCF_01144	6.02e-163	hisA	5.3.1.16	-	E	ko:K01814	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PIBGAFCF_01145	1.75e-141	hisH	-	-	E	ko:K02501	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PIBGAFCF_01146	6.49e-135	hisB	4.2.1.19	-	E	ko:K01693	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	imidazoleglycerol-phosphate dehydratase
PIBGAFCF_01147	4.77e-279	hisD	1.1.1.23	-	E	ko:K00013	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PIBGAFCF_01148	1.45e-145	hisG	2.4.2.17	-	E	ko:K00765,ko:K02502	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
PIBGAFCF_01149	9.79e-260	hisZ	-	-	E	ko:K02502	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
PIBGAFCF_01150	3.83e-173	yvpB	-	-	NU	-	-	-	protein conserved in bacteria
PIBGAFCF_01151	1.2e-110	yvoF	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	COG0110 Acetyltransferase (isoleucine patch superfamily)
PIBGAFCF_01152	3.18e-155	ppaX	3.6.1.1	-	S	ko:K06019	ko00190,map00190	ko00000,ko00001,ko01000	Hydrolyzes pyrophosphate formed during P-Ser-HPr dephosphorylation by HPrK P. Might play a role in controlling the intracellular pyrophosphate pool
PIBGAFCF_01153	5.06e-193	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PIBGAFCF_01154	6e-216	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Also phosphorylates dephosphorylates the HPr-like catabolite repression protein crh on a specific serine residue. Therefore, by controlling the phosphorylation state of HPr and crh, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PIBGAFCF_01155	2.47e-272	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
PIBGAFCF_01156	1.44e-168	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PIBGAFCF_01157	2.9e-169	yvoA	-	-	K	ko:K03710	-	ko00000,ko03000	transcriptional
PIBGAFCF_01158	6.76e-131	yxaF	-	-	K	ko:K18939	-	ko00000,ko00002,ko03000	Transcriptional regulator
PIBGAFCF_01159	0.0	yvnB	-	-	Q	-	-	-	Calcineurin-like phosphoesterase
PIBGAFCF_01160	1.09e-65	yvlD	-	-	S	ko:K08972	-	ko00000	Membrane
PIBGAFCF_01161	8.1e-36	yvlC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain
PIBGAFCF_01162	4.14e-214	yvlB	-	-	S	-	-	-	Putative adhesin
PIBGAFCF_01163	1.79e-61	yvlA	-	-	-	-	-	-	-
PIBGAFCF_01164	1.29e-40	yvkN	-	-	-	-	-	-	-
PIBGAFCF_01165	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PIBGAFCF_01166	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PIBGAFCF_01167	2.59e-45	csbA	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_01168	0.0	yvkC	2.7.9.2	-	GT	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Phosphotransferase
PIBGAFCF_01169	1.12e-119	yvkB	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_01170	4.95e-290	yvkA	-	-	P	-	-	-	-transporter
PIBGAFCF_01173	1.39e-278	minJ	-	-	O	-	-	-	COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PIBGAFCF_01174	5.83e-72	swrA	-	-	S	-	-	-	Swarming motility protein
PIBGAFCF_01175	0.0	ctpB	3.4.21.102	-	M	ko:K03797	-	ko00000,ko01000,ko01002	Belongs to the peptidase S41A family
PIBGAFCF_01176	1.35e-271	ywoF	-	-	P	-	-	-	Right handed beta helix region
PIBGAFCF_01177	1.48e-196	ftsX	-	-	D	ko:K09811	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03036	Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
PIBGAFCF_01178	3.53e-158	ftsE	-	-	D	ko:K09812	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03036	cell division ATP-binding protein FtsE
PIBGAFCF_01179	1.47e-58	cccB	-	-	C	ko:K12263,ko:K13300	-	ko00000	COG2010 Cytochrome c, mono- and diheme variants
PIBGAFCF_01180	5.39e-189	yvjA	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2179)
PIBGAFCF_01181	1.08e-222	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PIBGAFCF_01182	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PIBGAFCF_01183	1.73e-129	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PIBGAFCF_01184	1.92e-89	-	-	-	-	-	-	-	-
PIBGAFCF_01185	1.57e-09	fliT	-	-	S	ko:K02423	ko02040,map02040	ko00000,ko00001,ko02035	bacterial-type flagellum organization
PIBGAFCF_01186	2.18e-83	fliS	-	-	N	ko:K02422	ko02040,map02040	ko00000,ko00001,ko02035	flagellar protein FliS
PIBGAFCF_01187	0.0	fliD	-	-	N	ko:K02407	ko02040,map02040	ko00000,ko00001,ko02035	morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
PIBGAFCF_01188	9.98e-154	hag	-	-	N	ko:K02406	ko02020,ko02040,ko04621,ko04626,ko05132,ko05134,map02020,map02040,map04621,map04626,map05132,map05134	ko00000,ko00001,ko02035	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
PIBGAFCF_01189	2.2e-42	csrA	-	-	T	ko:K03563	ko02020,ko02025,ko02026,ko05111,map02020,map02025,map02026,map05111	ko00000,ko00001,ko03019	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
PIBGAFCF_01190	5.2e-98	fliW	-	-	S	ko:K13626	-	ko00000,ko02035	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
PIBGAFCF_01191	1.27e-104	yviE	-	-	-	-	-	-	-
PIBGAFCF_01192	1.63e-206	flgL	-	-	N	ko:K02397	ko02040,map02040	ko00000,ko00001,ko02035	Belongs to the bacterial flagellin family
PIBGAFCF_01193	0.0	flgK	-	-	N	ko:K02396	ko02040,map02040	ko00000,ko00001,ko02035	flagellar hook-associated protein
PIBGAFCF_01194	1.43e-101	yvyG	-	-	NOU	-	-	-	FlgN protein
PIBGAFCF_01195	5.05e-52	flgM	-	-	KNU	ko:K02398	ko02020,ko02025,ko02026,ko02040,map02020,map02025,map02026,map02040	ko00000,ko00001,ko02035	Negative regulator of flagellin synthesis
PIBGAFCF_01196	6.15e-95	yvyF	-	-	S	-	-	-	flagellar protein
PIBGAFCF_01197	4.91e-79	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Phosphoribosyl transferase domain
PIBGAFCF_01198	2.93e-56	comFB	-	-	S	ko:K02241	-	ko00000,ko00002,ko02044	Late competence development protein ComFB
PIBGAFCF_01199	5.41e-316	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	COG4098 Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
PIBGAFCF_01200	3.16e-197	degV	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_01201	7.16e-163	degU	-	-	KT	ko:K02479,ko:K07692	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PIBGAFCF_01202	5.43e-244	degS	2.7.13.3	-	T	ko:K07777	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Member of the two-component regulatory system DegS DegU, which plays an important role in the transition growth phase
PIBGAFCF_01203	1.1e-150	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	Domain of unknown function (DUF1949)
PIBGAFCF_01204	9.24e-234	yvhJ	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_01205	8.94e-233	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase UDP-N-acetylglucosamine-1-phosphate transferase
PIBGAFCF_01206	4.55e-285	tuaH	-	-	M	ko:K16699	-	ko00000,ko01000,ko01003	Teichuronic acid biosynthesis glycosyltransferase tuaH
PIBGAFCF_01207	2.22e-182	tuaG	-	GT2	M	ko:K16698	-	ko00000,ko01000,ko01003	Glycosyltransferase like family 2
PIBGAFCF_01208	8.08e-138	tuaF	-	-	M	ko:K16706	-	ko00000	protein involved in exopolysaccharide biosynthesis
PIBGAFCF_01209	8.4e-317	tuaE	-	-	M	ko:K16705	-	ko00000	Teichuronic acid biosynthesis protein
PIBGAFCF_01210	2.38e-309	tuaD	1.1.1.22	-	M	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PIBGAFCF_01211	2.76e-270	tuaC	-	GT4	GM	ko:K16697	-	ko00000,ko01000,ko01003	Teichuronic acid
PIBGAFCF_01212	0.0	tuaB	-	-	S	ko:K03328,ko:K16694,ko:K16695	-	ko00000,ko02000	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PIBGAFCF_01213	8.51e-151	tuaA	-	-	M	-	-	-	COG2148 Sugar transferases involved in lipopolysaccharide synthesis
PIBGAFCF_01214	5.41e-269	lytC	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	n-acetylmuramoyl-L-alanine amidase
PIBGAFCF_01215	0.0	lytB	-	-	D	-	-	-	Stage II sporulation protein
PIBGAFCF_01216	1.99e-39	-	-	-	-	-	-	-	-
PIBGAFCF_01217	1.15e-179	lytR	-	-	K	-	-	-	May catalyze the final step in cell wall teichoic acid biosynthesis, the transfer of the anionic cell wall polymers (APs) from their lipid-linked precursor to the cell wall peptidoglycan (PG)
PIBGAFCF_01218	8.48e-235	mnaA	5.1.3.14	-	M	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PIBGAFCF_01219	2.14e-200	gtaB	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
PIBGAFCF_01220	1.55e-241	tagH	3.6.3.40	-	GM	ko:K09693	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
PIBGAFCF_01221	7.77e-174	tagG	-	-	GM	ko:K09692	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transport permease protein
PIBGAFCF_01222	0.0	tagF	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
PIBGAFCF_01223	0.0	tagE	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferase 1 domain A
PIBGAFCF_01224	2.69e-91	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Cytidylyltransferase
PIBGAFCF_01225	6.85e-179	tagA	2.4.1.187	GT26	M	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PIBGAFCF_01226	5.65e-258	tagB	2.7.8.44	-	M	ko:K21285	-	ko00000,ko01000	glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
PIBGAFCF_01227	2.3e-290	lytD	3.2.1.96	-	G	ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PIBGAFCF_01228	9.18e-204	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
PIBGAFCF_01229	0.0	gerBA	-	-	EG	ko:K06288,ko:K06291,ko:K06310	-	ko00000	Spore germination protein
PIBGAFCF_01230	2.94e-243	gerBB	-	-	E	ko:K06289,ko:K06292	-	ko00000,ko02000	Spore germination protein
PIBGAFCF_01231	1.04e-216	gerBC	-	-	S	ko:K06290,ko:K06293,ko:K06312	-	ko00000	Spore germination protein
PIBGAFCF_01232	0.0	-	-	-	J	ko:K07011	-	ko00000	Glycosyl transferase family 2
PIBGAFCF_01233	9.98e-304	ywtG	-	-	U	ko:K02100,ko:K06609,ko:K08139	ko04113,map04113	ko00000,ko00001,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PIBGAFCF_01234	2.02e-223	ywtF_2	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_01235	1.33e-195	ywtE	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolases of the HAD superfamily
PIBGAFCF_01236	1.4e-60	yttA	-	-	S	-	-	-	Pfam Transposase IS66
PIBGAFCF_01237	1.37e-288	pgdS	-	-	M	-	-	-	COG0791 Cell wall-associated hydrolases (invasion-associated proteins)
PIBGAFCF_01238	1.16e-28	ywtC	-	-	-	-	-	-	-
PIBGAFCF_01239	7.41e-276	capA	-	-	M	ko:K07282	-	ko00000	enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
PIBGAFCF_01240	2.95e-91	capC	-	-	S	ko:K22116	-	ko00000	biosynthesis protein
PIBGAFCF_01241	1.46e-283	capB	-	-	M	ko:K01932	-	ko00000,ko01000	COG0769 UDP-N-acetylmuramyl tripeptide synthase
PIBGAFCF_01242	1.63e-244	gerKA	-	-	EG	ko:K06295	-	ko00000	Spore germination protein
PIBGAFCF_01243	1.4e-227	-	-	-	E	-	-	-	Spore germination protein
PIBGAFCF_01244	3.22e-63	gerKC	-	-	S	-	-	-	Spore germination B3/ GerAC like, C-terminal
PIBGAFCF_01245	4.74e-144	gerKC	-	-	S	-	-	-	Spore germination B3/ GerAC like, C-terminal
PIBGAFCF_01246	1.08e-221	rbsR	-	-	K	ko:K02529,ko:K03484	-	ko00000,ko03000	transcriptional
PIBGAFCF_01247	2.47e-195	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PIBGAFCF_01248	3.79e-83	rbsD	5.4.99.62	-	G	ko:K06726	ko02010,map02010	ko00000,ko00001,ko01000	Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PIBGAFCF_01249	0.0	rbsA	3.6.3.17	-	G	ko:K10441	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system
PIBGAFCF_01250	7.29e-203	rbsC	-	-	G	ko:K10440	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PIBGAFCF_01251	7.75e-205	rbsB	-	-	G	ko:K10439	ko02010,ko02030,map02010,map02030	ko00000,ko00001,ko00002,ko02000	COG1879 ABC-type sugar transport system, periplasmic component
PIBGAFCF_01252	6.3e-111	batE	-	-	T	-	-	-	Sh3 type 3 domain protein
PIBGAFCF_01253	2.39e-115	ywrO	-	-	S	-	-	-	NADPH-quinone reductase (modulator of drug activity B)
PIBGAFCF_01254	3.56e-185	budA	4.1.1.5	-	H	ko:K01575	ko00650,ko00660,map00650,map00660	ko00000,ko00001,ko01000	Alpha-acetolactate decarboxylase
PIBGAFCF_01255	0.0	alsS	2.2.1.6	-	EH	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
PIBGAFCF_01256	6.98e-211	alsR	-	-	K	-	-	-	LysR substrate binding domain
PIBGAFCF_01257	5.9e-297	ywrK	-	-	P	ko:K03893	-	ko00000,ko02000	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
PIBGAFCF_01258	8.96e-150	ywrJ	-	-	-	-	-	-	-
PIBGAFCF_01259	4.38e-157	cotB	-	-	-	ko:K06325	-	ko00000	-
PIBGAFCF_01260	9.11e-261	cotH	-	-	M	ko:K06330	-	ko00000	Spore Coat
PIBGAFCF_01261	9.99e-10	-	-	-	-	-	-	-	-
PIBGAFCF_01262	4.7e-143	ywrF	-	-	S	-	-	-	COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
PIBGAFCF_01264	0.0	ywrD	2.3.2.2, 3.4.19.13	-	E	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	ko00000,ko00001,ko01000,ko01002	gamma-glutamyltransferase
PIBGAFCF_01265	3.97e-107	ywrC	-	-	K	ko:K03719	-	ko00000,ko03000,ko03036	Transcriptional regulator
PIBGAFCF_01266	7.48e-126	ywrB	-	-	P	ko:K07240	-	ko00000,ko02000	Chromate transporter
PIBGAFCF_01267	2.03e-112	ywrA	-	-	P	ko:K07240	-	ko00000,ko02000	COG2059 Chromate transport protein ChrA
PIBGAFCF_01268	1.29e-130	-	-	-	-	-	-	-	-
PIBGAFCF_01269	7.15e-83	-	-	-	-	-	-	-	-
PIBGAFCF_01270	3.77e-97	-	-	-	S	ko:K21494	-	ko00000,ko02048	SMI1 / KNR4 family
PIBGAFCF_01271	1.92e-25	-	-	-	-	-	-	-	-
PIBGAFCF_01272	2.19e-75	-	-	-	S	-	-	-	SUKH-4 immunity protein
PIBGAFCF_01273	2.72e-95	ywqJ	-	-	S	-	-	-	Pre-toxin TG
PIBGAFCF_01274	3.03e-133	ywqJ	-	-	S	-	-	-	Pre-toxin TG
PIBGAFCF_01275	1.36e-48	ywqI	-	-	S	-	-	-	Family of unknown function (DUF5344)
PIBGAFCF_01277	3.03e-183	ywqG	-	-	S	-	-	-	Domain of unknown function (DUF1963)
PIBGAFCF_01278	9.97e-304	ywqF	1.1.1.22	-	M	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PIBGAFCF_01279	4.63e-176	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	COG4464 Capsular polysaccharide biosynthesis protein
PIBGAFCF_01280	3.37e-152	ywqD	2.7.10.2	-	D	ko:K00903	-	ko00000,ko01000,ko01001	COG0489 ATPases involved in chromosome partitioning
PIBGAFCF_01281	8.45e-144	ywqC	-	-	M	ko:K19420	-	ko00000	biosynthesis protein
PIBGAFCF_01282	3e-22	-	-	-	-	-	-	-	-
PIBGAFCF_01283	0.0	ywqB	-	-	S	-	-	-	SWIM zinc finger
PIBGAFCF_01284	0.0	ywqA	-	-	L	-	-	-	COG0553 Superfamily II DNA RNA helicases, SNF2 family
PIBGAFCF_01285	1.28e-193	ywpJ	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolases of the HAD superfamily
PIBGAFCF_01286	5.39e-178	glcR	-	-	K	ko:K22103	-	ko00000,ko03000	DeoR C terminal sensor domain
PIBGAFCF_01287	4.94e-75	ssbB	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Single-stranded DNA-binding protein
PIBGAFCF_01288	1.83e-74	ywpG	-	-	-	-	-	-	-
PIBGAFCF_01289	1.79e-89	ywpF	-	-	S	-	-	-	YwpF-like protein
PIBGAFCF_01290	2.54e-72	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PIBGAFCF_01291	3.15e-98	fabZ	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PIBGAFCF_01292	3.62e-246	rapD	-	-	S	ko:K06362	-	ko00000,ko01000	aspartate phosphatase
PIBGAFCF_01293	5.1e-176	flhP	-	-	N	ko:K02392	ko02040,map02040	ko00000,ko00001,ko02035	flagellar basal body
PIBGAFCF_01294	1.16e-170	flhO	-	-	N	ko:K02392	ko02040,map02040	ko00000,ko00001,ko02035	flagellar basal body
PIBGAFCF_01295	1.75e-231	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Rod shape-determining protein
PIBGAFCF_01296	5.93e-60	spoIIID	-	-	K	ko:K06283	-	ko00000,ko03000	Stage III sporulation protein D
PIBGAFCF_01297	5.3e-93	ywoH	-	-	K	-	-	-	transcriptional
PIBGAFCF_01298	1.12e-269	ywoG	-	-	EGP	-	-	-	COG0477 Permeases of the major facilitator superfamily
PIBGAFCF_01299	0.0	-	-	-	FH	ko:K03457,ko:K10975	-	ko00000,ko02000	COG1953 Cytosine uracil thiamine allantoin permeases
PIBGAFCF_01300	1.81e-308	ywoD	-	-	EGP	-	-	-	Major facilitator superfamily
PIBGAFCF_01301	2.1e-128	yjgF	-	-	Q	-	-	-	Isochorismatase family
PIBGAFCF_01302	3.63e-289	nrgA	-	-	P	ko:K03320	-	ko00000,ko02000	Ammonium transporter
PIBGAFCF_01303	1.51e-75	nrgB	-	-	K	ko:K04751	ko02020,map02020	ko00000,ko00001	Belongs to the P(II) protein family
PIBGAFCF_01304	1.11e-262	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
PIBGAFCF_01305	5.56e-130	bcrC	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	COG0671 Membrane-associated phospholipid phosphatase
PIBGAFCF_01306	3.41e-88	ywnJ	-	-	S	-	-	-	VanZ like family
PIBGAFCF_01307	1.67e-175	spoIIQ	-	-	M	ko:K06386	-	ko00000	COG0739 Membrane proteins related to metalloendopeptidases
PIBGAFCF_01308	7.6e-113	ywnH	2.3.1.183	-	M	ko:K03823	ko00440,ko01130,map00440,map01130	ko00000,ko00001,ko01000	COG1247 Sortase and related acyltransferases
PIBGAFCF_01310	2.45e-88	ywnF	-	-	S	-	-	-	Family of unknown function (DUF5392)
PIBGAFCF_01311	0.0	ywnE	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PIBGAFCF_01312	1.12e-21	yqgA	-	-	-	-	-	-	-
PIBGAFCF_01313	1.33e-77	ywnC	-	-	S	-	-	-	Family of unknown function (DUF5362)
PIBGAFCF_01314	3.75e-116	ywnB	-	-	S	ko:K07118	-	ko00000	NAD(P)H-binding
PIBGAFCF_01315	3.09e-88	ywnA	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_01316	0.0	ureC	3.5.1.5	-	E	ko:K01428	ko00220,ko00230,ko00791,ko01100,ko01120,ko05120,map00220,map00230,map00791,map01100,map01120,map05120	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family
PIBGAFCF_01317	4.37e-81	ureB	3.5.1.5	-	E	ko:K01429	ko00220,ko00230,ko00791,ko01100,ko01120,map00220,map00230,map00791,map01100,map01120	ko00000,ko00001,ko01000	Belongs to the urease beta subunit family
PIBGAFCF_01318	1.94e-66	ureA	3.5.1.5	-	E	ko:K01430	ko00220,ko00230,ko00791,ko01100,ko01120,map00220,map00230,map00791,map01100,map01120	ko00000,ko00001,ko01000	Belongs to the urease gamma subunit family
PIBGAFCF_01319	2.21e-15	csbD	-	-	K	-	-	-	CsbD-like
PIBGAFCF_01320	1.01e-105	ywmF	-	-	S	-	-	-	Peptidase M50
PIBGAFCF_01321	1.44e-114	rapA	-	-	S	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	ko00000,ko00001,ko01000	Response regulator aspartate phosphatase
PIBGAFCF_01322	2.09e-243	moaA	4.1.99.22	-	H	ko:K03639	ko00790,ko01100,ko04122,map00790,map01100,map04122	ko00000,ko00001,ko01000	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
PIBGAFCF_01323	2.91e-183	fdhD	-	-	C	ko:K02379	-	ko00000	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
PIBGAFCF_01325	2.79e-154	ywmD	-	-	S	ko:K07114	-	ko00000,ko02000	protein containing a von Willebrand factor type A (vWA) domain
PIBGAFCF_01326	4.74e-145	ywmC	-	-	S	ko:K07114	-	ko00000,ko02000	protein containing a von Willebrand factor type A (vWA) domain
PIBGAFCF_01327	1.97e-231	spoIID	-	-	D	ko:K06381	-	ko00000	Stage II sporulation protein D
PIBGAFCF_01328	1.85e-301	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PIBGAFCF_01329	1.27e-169	ywmB	-	-	S	-	-	-	TATA-box binding
PIBGAFCF_01330	1.85e-44	ywzB	-	-	S	-	-	-	membrane
PIBGAFCF_01331	1.98e-115	ywmA	-	-	-	-	-	-	-
PIBGAFCF_01332	3.36e-82	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
PIBGAFCF_01333	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PIBGAFCF_01334	1.1e-195	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PIBGAFCF_01335	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PIBGAFCF_01336	1.95e-116	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PIBGAFCF_01337	3.35e-82	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PIBGAFCF_01338	3.01e-36	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PIBGAFCF_01339	5.19e-168	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
PIBGAFCF_01340	4.49e-80	atpI	-	-	S	ko:K02116	-	ko00000,ko00194	ATP synthase
PIBGAFCF_01341	1.3e-146	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PIBGAFCF_01342	5.69e-299	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PIBGAFCF_01343	3.53e-123	ywlG	-	-	S	-	-	-	Belongs to the UPF0340 family
PIBGAFCF_01344	9.2e-104	rpiB	5.3.1.6	-	G	ko:K01808	ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribose 5-phosphate isomerase
PIBGAFCF_01345	1.84e-95	ywlE	3.1.3.48, 3.9.1.2	-	T	ko:K01104,ko:K20201	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PIBGAFCF_01346	1.86e-116	mntP	-	-	P	-	-	-	Probably functions as a manganese efflux pump
PIBGAFCF_01347	1.34e-237	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PIBGAFCF_01348	6.75e-96	ywlB	-	-	E	-	-	-	Belongs to the acetyltransferase family. ArgA subfamily
PIBGAFCF_01349	1.73e-148	spoIIR	-	-	S	ko:K06387	-	ko00000	stage II sporulation protein R
PIBGAFCF_01350	4.04e-77	ywlA	-	-	S	-	-	-	Uncharacterised protein family (UPF0715)
PIBGAFCF_01352	2.91e-195	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PIBGAFCF_01353	2.06e-240	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PIBGAFCF_01354	2.93e-85	ywkD	-	-	E	ko:K08234	-	ko00000	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PIBGAFCF_01355	2.52e-115	racA	-	-	K	ko:K11686	-	ko00000,ko03036	Required for the formation of axial filaments and for anchoring the origin regions at the cell poles in sporulating cells, thus ensuring proper chromosome segregation in the prespore. Binds in a dispersed manner throughout the chromosome but preferentially to sites clustered in the origin portion of the chromosome, causing condensation of the chromosome and its remodeling into an elongated, anchored structure
PIBGAFCF_01356	6.87e-194	ywkB	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
PIBGAFCF_01357	0.0	ykwA	1.1.1.38	-	C	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	ko00000,ko00001,ko01000	malic enzyme
PIBGAFCF_01358	6.49e-131	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
PIBGAFCF_01359	7e-45	rpmE	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the 23S rRNA
PIBGAFCF_01360	5.13e-304	rho	-	-	K	ko:K03628	ko03018,map03018	ko00000,ko00001,ko03019,ko03021	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PIBGAFCF_01361	9.65e-223	glpX	3.1.3.11	-	G	ko:K02446	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	fructose-1,6-bisphosphatase
PIBGAFCF_01362	1.59e-303	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PIBGAFCF_01363	3.69e-143	tal	2.2.1.2	-	G	ko:K00616	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PIBGAFCF_01364	4.53e-203	fbaA	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Aldolase
PIBGAFCF_01365	1.07e-81	spo0F	-	-	T	ko:K02490	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	COG0784 FOG CheY-like receiver
PIBGAFCF_01366	1.84e-117	ywjG	-	-	S	-	-	-	Domain of unknown function (DUF2529)
PIBGAFCF_01367	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PIBGAFCF_01368	1.32e-72	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PIBGAFCF_01369	0.0	ywjF	-	-	C	-	-	-	COG0247 Fe-S oxidoreductase
PIBGAFCF_01370	1.51e-263	clsB	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the phospholipase D family. Cardiolipin synthase subfamily
PIBGAFCF_01371	5.39e-224	uvsE	-	-	L	ko:K13281	-	ko00000,ko01000	Component in a DNA repair pathway. Removal of UV-light damaged nucleotides. Recognizes pyrimidine dimers and cleave a phosphodiester bond immediately 5' to the lesion
PIBGAFCF_01372	1.32e-57	ywjC	-	-	-	-	-	-	-
PIBGAFCF_01373	0.0	ywjA	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
PIBGAFCF_01374	0.0	ywiE	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PIBGAFCF_01375	1.61e-149	narI	1.7.5.1	-	C	ko:K00374	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	Nitrate reductase (gamma
PIBGAFCF_01376	1.07e-110	narJ	-	-	C	ko:K00373	ko02020,map02020	ko00000,ko00001	nitrate reductase
PIBGAFCF_01377	6.59e-59	narH	1.7.5.1	-	C	ko:K00371	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	Nitrate reductase, beta
PIBGAFCF_01378	4.79e-299	narH	1.7.5.1	-	C	ko:K00371	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	Nitrate reductase, beta
PIBGAFCF_01379	0.0	narG	1.7.5.1	-	C	ko:K00370	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PIBGAFCF_01380	8.63e-102	arfM	-	-	T	ko:K10914	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	cyclic nucleotide binding
PIBGAFCF_01381	8.59e-162	ywiC	-	-	S	-	-	-	YwiC-like protein
PIBGAFCF_01382	5.83e-162	fnr	-	-	K	-	-	-	helix_turn_helix, cAMP Regulatory protein
PIBGAFCF_01383	7.56e-267	narK	-	-	P	ko:K02575	ko00910,map00910	ko00000,ko00001,ko00002,ko02000	COG2223 Nitrate nitrite transporter
PIBGAFCF_01384	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
PIBGAFCF_01385	4.46e-94	ywiB	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_01387	2.2e-248	ywhL	-	-	CO	-	-	-	amine dehydrogenase activity
PIBGAFCF_01388	3.16e-102	rapA1	-	-	S	ko:K06359,ko:K06361	ko02024,map02024	ko00000,ko00001,ko01000	aspartate phosphatase
PIBGAFCF_01390	2.87e-213	speB	3.5.3.11	-	E	ko:K01480	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the arginase family
PIBGAFCF_01391	6.45e-203	speE	2.5.1.16	-	E	ko:K00797	ko00270,ko00330,ko00410,ko00480,ko01100,map00270,map00330,map00410,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
PIBGAFCF_01392	0.0	pbpG	2.4.1.129, 3.4.16.4	GT51	M	ko:K21464	ko00550,map00550	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
PIBGAFCF_01393	1.96e-93	-	-	-	-	-	-	-	-
PIBGAFCF_01394	2.07e-116	ywhD	-	-	S	-	-	-	YwhD family
PIBGAFCF_01395	1.29e-151	ywhC	-	-	S	-	-	-	Peptidase family M50
PIBGAFCF_01396	2.37e-34	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	4-oxalocrotonate tautomerase
PIBGAFCF_01397	3.29e-90	ywhA	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_01398	4.79e-307	potE5	-	-	E	ko:K03294	-	ko00000	C-terminus of AA_permease
PIBGAFCF_01399	1.37e-113	ywgA	-	-	-	ko:K09388	-	ko00000	-
PIBGAFCF_01400	0.0	ywfO	-	-	S	ko:K06885	-	ko00000	COG1078 HD superfamily phosphohydrolases
PIBGAFCF_01401	8.55e-49	ywzC	-	-	S	-	-	-	Belongs to the UPF0741 family
PIBGAFCF_01402	3.27e-136	rsfA_1	-	-	-	ko:K06314	-	ko00000,ko03000	-
PIBGAFCF_01403	4.41e-67	-	-	-	K	ko:K10947	-	ko00000,ko03000	PadR family transcriptional regulator
PIBGAFCF_01404	2.51e-109	-	-	-	S	-	-	-	membrane
PIBGAFCF_01405	1.93e-194	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PIBGAFCF_01406	4.3e-208	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter (permease)
PIBGAFCF_01409	1.87e-209	-	-	-	-	-	-	-	-
PIBGAFCF_01411	8.05e-198	lipL	2.3.1.200, 2.3.1.204	-	H	ko:K16869,ko:K18821	-	ko00000,ko01000	Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes
PIBGAFCF_01412	1.33e-199	cysL	-	-	K	ko:K21900	-	ko00000,ko03000	Transcriptional regulator
PIBGAFCF_01413	9.29e-207	-	-	-	S	-	-	-	Conserved hypothetical protein 698
PIBGAFCF_01414	2.27e-222	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	In Salmonella this enzyme is required for ethanolamine catabolism
PIBGAFCF_01415	6.64e-185	ywfI	-	-	C	ko:K00435	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko01000	May function as heme-dependent peroxidase
PIBGAFCF_01416	2.37e-20	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
PIBGAFCF_01418	1.08e-86	dinB	-	-	S	-	-	-	DinB family
PIBGAFCF_01419	1.82e-231	adhP	1.1.1.1	-	C	ko:K00001,ko:K13953	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
PIBGAFCF_01420	5.82e-16	-	-	-	-	-	-	-	-
PIBGAFCF_01421	2.04e-10	-	-	-	-	-	-	-	-
PIBGAFCF_01422	1.95e-39	-	-	-	S	-	-	-	Protein of unknown function (DUF4025)
PIBGAFCF_01423	1.69e-13	ywlA	-	-	S	-	-	-	Uncharacterised protein family (UPF0715)
PIBGAFCF_01424	1.52e-164	yoaP	-	-	K	-	-	-	YoaP-like
PIBGAFCF_01425	1.09e-117	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PIBGAFCF_01427	1.87e-53	-	-	-	-	-	-	-	-
PIBGAFCF_01429	2.39e-130	-	-	-	S	-	-	-	Domain of unknown function (DUF3885)
PIBGAFCF_01430	1.34e-238	-	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PIBGAFCF_01431	3.2e-150	-	-	AA10,CBM73	S	ko:K03933	-	ko00000	Pfam:Chitin_bind_3
PIBGAFCF_01432	9.32e-06	-	-	-	S	-	-	-	Protein of unknown function (Tiny_TM_bacill)
PIBGAFCF_01433	1.97e-119	yvgO	-	-	-	-	-	-	-
PIBGAFCF_01435	0.0	yobO	-	-	M	-	-	-	Pectate lyase superfamily protein
PIBGAFCF_01436	1.33e-43	-	-	-	S	-	-	-	TM2 domain
PIBGAFCF_01437	9.69e-99	yncF	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Deoxyuridine 5'-triphosphate
PIBGAFCF_01438	2.53e-162	yndL	-	-	S	-	-	-	Replication protein
PIBGAFCF_01439	4.12e-10	-	-	-	-	-	-	-	-
PIBGAFCF_01440	4.95e-182	-	-	-	O	-	-	-	COG0330 Membrane protease subunits, stomatin prohibitin homologs
PIBGAFCF_01441	2.23e-86	yndM	-	-	S	-	-	-	Protein of unknown function (DUF2512)
PIBGAFCF_01443	7.8e-142	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PIBGAFCF_01444	4.8e-66	yneA	-	-	D	-	-	-	Inhibits cell division during the SOS response. Affects a later stage of the cell division protein assembly, after the assembly of the Z ring, by probably suppressing recruitment of FtsL and or DivIC to the division machinery
PIBGAFCF_01445	4.8e-141	yneB	-	-	L	-	-	-	resolvase
PIBGAFCF_01446	2.33e-43	ynzC	-	-	S	-	-	-	UPF0291 protein
PIBGAFCF_01447	0.0	tkt	2.2.1.1	-	G	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PIBGAFCF_01448	3.48e-103	yneE	-	-	S	-	-	-	Sporulation inhibitor of replication protein sirA
PIBGAFCF_01449	6.2e-39	yneF	-	-	S	ko:K09976	-	ko00000	UPF0154 protein
PIBGAFCF_01450	8.06e-33	ynzD	-	-	S	-	-	-	Spo0E like sporulation regulatory protein
PIBGAFCF_01451	1.38e-158	ccdA	-	-	O	ko:K06196	-	ko00000,ko02000	cytochrome c biogenesis protein
PIBGAFCF_01452	4.11e-75	ccdB	-	-	T	ko:K03413	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko02022,ko02035	cheY-homologous receiver domain
PIBGAFCF_01453	7.59e-97	yneJ	-	-	O	-	-	-	COG4846 Membrane protein involved in cytochrome C biogenesis
PIBGAFCF_01454	4.28e-92	yneK	-	-	S	-	-	-	Protein of unknown function (DUF2621)
PIBGAFCF_01455	2.64e-77	cotM	-	-	O	ko:K06335	-	ko00000	Spore coat protein
PIBGAFCF_01456	3.28e-26	sspP	-	-	S	ko:K06433	-	ko00000	Belongs to the SspP family
PIBGAFCF_01457	6.2e-22	sspO	-	-	S	ko:K06432	-	ko00000	Belongs to the SspO family
PIBGAFCF_01458	0.0	citB	4.2.1.3	-	C	ko:K01681	ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
PIBGAFCF_01459	4.36e-114	yneN	-	-	CO	-	-	-	alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
PIBGAFCF_01461	4.08e-43	tlp	-	-	S	ko:K06434	-	ko00000	Belongs to the Tlp family
PIBGAFCF_01462	8.11e-95	yneP	-	-	S	ko:K07107	-	ko00000,ko01000	Thioesterase-like superfamily
PIBGAFCF_01463	5.95e-65	yneQ	-	-	-	-	-	-	-
PIBGAFCF_01464	9.38e-58	yneR	-	-	S	-	-	-	Belongs to the HesB IscA family
PIBGAFCF_01465	1.51e-119	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PIBGAFCF_01466	1.41e-89	yneT	-	-	S	ko:K06929	-	ko00000	CoA-binding protein
PIBGAFCF_01467	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PIBGAFCF_01468	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PIBGAFCF_01469	2.21e-19	-	-	-	-	-	-	-	-
PIBGAFCF_01470	2.04e-60	ynfC	-	-	-	-	-	-	-
PIBGAFCF_01471	0.0	alsT	-	-	E	ko:K03310,ko:K11626	ko02020,map02020	ko00000,ko00001	Sodium alanine symporter
PIBGAFCF_01472	1.56e-28	yndG	-	-	S	-	-	-	DoxX-like family
PIBGAFCF_01473	2.24e-99	-	-	-	S	-	-	-	Domain of unknown function (DUF4166)
PIBGAFCF_01474	0.0	yndJ	-	-	S	-	-	-	YndJ-like protein
PIBGAFCF_01475	2.03e-67	yvlA	-	-	S	-	-	-	Domain of unknown function (DUF4870)
PIBGAFCF_01476	3.49e-282	-	-	-	T	-	-	-	Histidine kinase
PIBGAFCF_01477	1.84e-155	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
PIBGAFCF_01478	2.01e-303	-	3.2.1.136	GH5	M	ko:K15924	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 30 family
PIBGAFCF_01479	1.02e-289	xynD	3.2.1.55	CBM6,GH43	G	ko:K15921	ko00520,map00520	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
PIBGAFCF_01480	6.1e-34	xynD	3.2.1.55	CBM6,GH43	G	ko:K15921	ko00520,map00520	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
PIBGAFCF_01481	0.0	-	-	-	Q	ko:K15662,ko:K15663	ko01054,map01054	ko00000,ko00001,ko01008	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PIBGAFCF_01482	0.0	-	-	-	Q	ko:K15662,ko:K15663	ko01054,map01054	ko00000,ko00001,ko01008	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PIBGAFCF_01483	0.0	nrsA	-	-	Q	ko:K15661	ko01054,map01054	ko00000,ko00001,ko01008	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PIBGAFCF_01484	5.54e-193	fabD	2.3.1.39	-	I	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	malonyl CoA-acyl carrier protein transacylase
PIBGAFCF_01485	1.26e-156	yxjF	1.1.1.30	-	IQ	ko:K00019	ko00072,ko00650,ko01100,map00072,map00650,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetoacetate from 3-hydroxybutyrate
PIBGAFCF_01486	5.28e-135	scoB	2.8.3.5	-	I	ko:K01029	ko00072,ko00280,ko00650,map00072,map00280,map00650	ko00000,ko00001,ko01000	COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit
PIBGAFCF_01487	2.32e-145	scoA	2.8.3.5	-	I	ko:K01028	ko00072,ko00280,ko00650,map00072,map00280,map00650	ko00000,ko00001,ko01000	COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
PIBGAFCF_01488	6.2e-207	bioI	1.14.14.46	-	C	ko:K15468,ko:K16593	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko00199,ko01000,ko01008	Cytochrome P450
PIBGAFCF_01489	4.21e-242	bioB	2.8.1.6	-	H	ko:K01012	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
PIBGAFCF_01490	7.37e-158	bioD	6.3.3.3	-	H	ko:K01935	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
PIBGAFCF_01491	3.12e-254	bioF	2.3.1.29, 2.3.1.47	-	H	ko:K00639,ko:K00652	ko00260,ko00780,ko01100,map00260,map00780,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide
PIBGAFCF_01492	0.0	bioA	2.6.1.105, 2.6.1.62	-	H	ko:K00833,ko:K19563	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor
PIBGAFCF_01493	2.75e-169	bioW	6.2.1.14	-	H	ko:K01906	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transformation of pimelate into pimeloyl- CoA with concomitant hydrolysis of ATP to AMP
PIBGAFCF_01494	1.02e-88	yngA	-	-	S	-	-	-	membrane
PIBGAFCF_01495	1.01e-196	yngB	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
PIBGAFCF_01496	6.22e-134	yngC	-	-	S	-	-	-	SNARE associated Golgi protein
PIBGAFCF_01497	0.0	yngE	-	-	I	-	-	-	COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
PIBGAFCF_01498	1.79e-171	yngF	-	-	I	-	-	-	Belongs to the enoyl-CoA hydratase isomerase family
PIBGAFCF_01499	3.73e-209	yngG	4.1.3.4	-	E	ko:K01640	ko00072,ko00280,ko00281,ko00650,ko01100,ko04146,map00072,map00280,map00281,map00650,map01100,map04146	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA lyase
PIBGAFCF_01500	2.28e-40	-	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	Biotin carboxyl carrier protein
PIBGAFCF_01501	6.49e-304	yngH	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Biotin carboxylase
PIBGAFCF_01502	0.0	yngI	-	-	IQ	ko:K00666	-	ko00000,ko01000,ko01004	COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
PIBGAFCF_01503	2.84e-263	yngJ	1.3.8.1	-	I	ko:K00248	ko00071,ko00280,ko00650,ko01100,ko01110,ko01120,ko01200,ko01212,map00071,map00280,map00650,map01100,map01110,map01120,map01200,map01212	ko00000,ko00001,ko01000	acyl-CoA dehydrogenase
PIBGAFCF_01504	0.0	yngK	-	-	T	-	-	-	Glycosyl hydrolase-like 10
PIBGAFCF_01505	5.39e-82	yngL	-	-	S	-	-	-	Protein of unknown function (DUF1360)
PIBGAFCF_01506	0.0	-	-	-	Q	ko:K15656,ko:K15668	ko01054,ko02024,map01054,map02024	ko00000,ko00001,ko01008	D-alanine [D-alanyl carrier protein] ligase activity
PIBGAFCF_01507	0.0	-	-	-	Q	ko:K15664,ko:K15666,ko:K15667	ko01054,map01054	ko00000,ko00001,ko01008	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PIBGAFCF_01508	0.0	-	-	-	Q	ko:K15664,ko:K15666,ko:K15667	ko01054,map01054	ko00000,ko00001,ko01008	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PIBGAFCF_01509	0.0	dacC	3.4.16.4	-	M	ko:K07259	ko00550,map00550	ko00000,ko00001,ko01000,ko01002,ko01011	D-alanyl-D-alanine carboxypeptidase
PIBGAFCF_01510	1.56e-229	yoxA	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
PIBGAFCF_01511	7.59e-305	yoeA	-	-	V	-	-	-	MATE efflux family protein
PIBGAFCF_01512	8.33e-122	yoeB	-	-	S	-	-	-	IseA DL-endopeptidase inhibitor
PIBGAFCF_01514	7.69e-123	-	-	-	L	-	-	-	Integrase
PIBGAFCF_01515	7.83e-46	yoeD	-	-	G	-	-	-	Helix-turn-helix domain
PIBGAFCF_01516	0.0	ggt	2.3.2.2, 3.4.19.13	-	E	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	ko00000,ko00001,ko01000,ko01002	gamma-glutamyltransferase
PIBGAFCF_01517	6.45e-238	-	-	-	EGP	ko:K08164	-	ko00000,ko02000	-transporter
PIBGAFCF_01518	1.91e-66	-	-	-	K	-	-	-	Helix-turn-helix domain
PIBGAFCF_01519	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PIBGAFCF_01520	0.0	gltD	1.4.1.13, 1.4.1.14	-	E	ko:K00266	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases
PIBGAFCF_01521	0.0	gltA	1.4.1.13, 1.4.1.14, 1.4.7.1	-	E	ko:K00265,ko:K00284	ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	glutamate synthase
PIBGAFCF_01522	7.74e-201	gltC	-	-	K	ko:K09681	-	ko00000,ko03000	Transcriptional regulator
PIBGAFCF_01523	3.37e-251	proB	2.7.2.11	-	E	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PIBGAFCF_01524	5.78e-173	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PIBGAFCF_01525	6.69e-81	rtp	-	-	K	-	-	-	Plays a role in DNA replication and termination (fork arrest mechanism). Two dimers of rtp bind to the two inverted repeat regions (IRI and IRII) present in the termination site. The binding of each dimer is centered on an 8 bp direct repeat
PIBGAFCF_01526	4.03e-156	fabG	1.1.1.100	-	S	ko:K00059,ko:K07124	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the short-chain dehydrogenases reductases (SDR) family
PIBGAFCF_01527	1.23e-49	-	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PIBGAFCF_01528	6.92e-147	yoxB	-	-	-	-	-	-	-
PIBGAFCF_01529	1.15e-54	ycgF	-	-	E	-	-	-	Lysine exporter protein LysE YggA
PIBGAFCF_01530	6.64e-76	ycgF	-	-	E	-	-	-	Lysine exporter protein LysE YggA
PIBGAFCF_01531	5.9e-183	yqcI	-	-	S	ko:K09190	-	ko00000	YqcI/YcgG family
PIBGAFCF_01532	2.03e-305	ycgH	-	-	E	ko:K03293	-	ko00000	COG1113 Gamma-aminobutyrate permease and related permeases
PIBGAFCF_01533	2.87e-89	ycgI	-	-	S	ko:K09967	-	ko00000	Domain of unknown function (DUF1989)
PIBGAFCF_01534	2.05e-188	nadE	6.3.1.5	-	H	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PIBGAFCF_01535	1.69e-164	-	4.2.1.118	-	G	ko:K15652	ko00400,ko01110,ko01130,map00400,map01110,map01130	ko00000,ko00001,ko01000	Xylose isomerase-like TIM barrel
PIBGAFCF_01536	1.72e-245	-	-	-	G	ko:K08191,ko:K08194	-	ko00000,ko02000	COG0477 Permeases of the major facilitator superfamily
PIBGAFCF_01537	1.06e-27	-	-	-	G	ko:K08191,ko:K08194	-	ko00000,ko02000	COG0477 Permeases of the major facilitator superfamily
PIBGAFCF_01538	1.43e-134	aroK	2.7.1.71	-	F	ko:K00891	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PIBGAFCF_01539	9.05e-231	cah	3.1.1.41	-	Q	ko:K01060	ko00311,ko01130,map00311,map01130	ko00000,ko00001,ko01000	Acetyl xylan esterase (AXE1)
PIBGAFCF_01540	8.28e-178	ycgL	-	-	S	ko:K07074	-	ko00000	Predicted nucleotidyltransferase
PIBGAFCF_01541	1.53e-213	ycgM	-	-	E	ko:K00318	ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130	ko00000,ko00001,ko01000	Proline dehydrogenase
PIBGAFCF_01542	0.0	rocA	1.2.1.88	-	C	ko:K00294	ko00250,ko00330,ko01100,map00250,map00330,map01100	ko00000,ko00001,ko01000	Belongs to the aldehyde dehydrogenase family. RocA subfamily
PIBGAFCF_01543	1.05e-309	putP	-	-	E	ko:K11928	-	ko00000,ko02000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PIBGAFCF_01544	7.58e-286	ycgP	-	-	QT	-	-	-	COG2508 Regulator of polyketide synthase expression
PIBGAFCF_01545	4.86e-235	ycgT	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
PIBGAFCF_01546	0.0	nasF	2.1.1.107, 4.2.1.75	-	H	ko:K13542	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the precorrin methyltransferase family
PIBGAFCF_01547	1.64e-72	nasE	1.7.1.15	-	P	ko:K00363	ko00910,ko01120,map00910,map01120	ko00000,ko00001,ko00002,ko01000	Nitrite reductase
PIBGAFCF_01548	0.0	nasD	1.7.1.15	-	C	ko:K00362	ko00910,ko01120,map00910,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
PIBGAFCF_01549	1.41e-49	nasA	-	-	P	ko:K02575	ko00910,map00910	ko00000,ko00001,ko00002,ko02000	COG2223 Nitrate nitrite transporter
PIBGAFCF_01550	9.85e-281	yciC	-	-	S	-	-	-	GTPases (G3E family)
PIBGAFCF_01551	2.55e-221	fdh	1.1.1.1, 1.1.1.284	-	E	ko:K00121	ko00010,ko00071,ko00350,ko00625,ko00626,ko00680,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko05204,map00010,map00071,map00350,map00625,map00626,map00680,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01200,map01220,map05204	ko00000,ko00001,ko01000	COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases
PIBGAFCF_01552	3.65e-94	yckC	-	-	S	-	-	-	membrane
PIBGAFCF_01553	7.52e-65	-	-	-	S	-	-	-	Protein of unknown function (DUF2680)
PIBGAFCF_01554	0.0	yckE	3.2.1.21, 3.2.1.85, 3.2.1.86	GT1	G	ko:K01220,ko:K01223,ko:K05350	ko00010,ko00052,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00052,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PIBGAFCF_01555	7.34e-86	nin	-	-	S	-	-	-	Competence protein J (ComJ)
PIBGAFCF_01556	2.67e-101	nucA	-	-	M	-	-	-	Deoxyribonuclease NucA/NucB
PIBGAFCF_01557	7.04e-121	hxlB	5.3.1.27	-	G	ko:K08094	ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	SIS domain
PIBGAFCF_01558	6.52e-132	hxlA	4.1.2.43	-	G	ko:K08093	ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	3-hexulose-6-phosphate synthase
PIBGAFCF_01559	2.89e-84	hxlR	-	-	K	-	-	-	transcriptional
PIBGAFCF_01562	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
PIBGAFCF_01563	8.33e-230	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PIBGAFCF_01564	9.99e-39	yazB	-	-	K	-	-	-	transcriptional
PIBGAFCF_01565	4.38e-113	folK	2.7.6.3	-	H	ko:K00950	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
PIBGAFCF_01566	1.88e-80	folB	1.13.11.81, 4.1.2.25, 5.1.99.8	-	H	ko:K01633	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PIBGAFCF_01567	1.62e-196	folP	2.5.1.15	-	H	ko:K00796	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PIBGAFCF_01568	3.18e-191	pabC	4.1.3.38	-	EH	ko:K02619	ko00790,map00790	ko00000,ko00001,ko01000	4-amino-4-deoxychorismate lyase
PIBGAFCF_01569	5.14e-137	pabA	2.6.1.85	-	EH	ko:K01664	ko00790,map00790	ko00000,ko00001,ko01000	Anthranilate synthase
PIBGAFCF_01570	0.0	pabB	2.6.1.85	-	EH	ko:K01665	ko00790,map00790	ko00000,ko00001,ko01000	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PIBGAFCF_01571	1.79e-216	cysK	2.5.1.47	-	E	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
PIBGAFCF_01572	1.22e-192	yacD	5.2.1.8	-	O	ko:K07533	-	ko00000,ko01000,ko03110	peptidyl-prolyl isomerase
PIBGAFCF_01573	7.52e-205	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PIBGAFCF_01574	6.69e-177	coaX	2.7.1.33	-	F	ko:K03525	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PIBGAFCF_01575	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PIBGAFCF_01576	4.29e-119	hpt	2.4.2.8, 6.3.4.19	-	F	ko:K00760,ko:K15780	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Belongs to the purine pyrimidine phosphoribosyltransferase family
PIBGAFCF_01577	0.0	tilS	2.4.2.8, 6.3.4.19	-	D	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PIBGAFCF_01578	1.18e-229	yabT	2.7.11.1	-	KLT	ko:K08884	-	ko00000,ko01000,ko01001	serine threonine protein kinase
PIBGAFCF_01579	8.92e-165	yabS	-	-	S	ko:K07114	-	ko00000,ko02000	protein containing a von Willebrand factor type A (vWA) domain
PIBGAFCF_01580	0.0	spoIIE	3.1.3.16	-	KT	ko:K06382	-	ko00000,ko01000	stage II sporulation protein E
PIBGAFCF_01583	3.54e-82	yabR	-	-	J	ko:K07571	-	ko00000	RNA binding protein (contains ribosomal protein S1 domain)
PIBGAFCF_01584	2.42e-74	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
PIBGAFCF_01585	5.13e-129	yabQ	-	-	S	-	-	-	spore cortex biosynthesis protein
PIBGAFCF_01586	5.47e-66	yabP	-	-	S	-	-	-	Sporulation protein YabP
PIBGAFCF_01587	8.51e-50	yabO	-	-	J	-	-	-	COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
PIBGAFCF_01588	0.0	yabN	3.6.1.66	-	S	ko:K02428,ko:K02499	ko00230,map00230	ko00000,ko00001,ko01000,ko03036	COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like
PIBGAFCF_01589	0.0	yabM	-	-	S	ko:K03328	-	ko00000	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PIBGAFCF_01590	1.09e-116	spoVT	-	-	K	ko:K04769	-	ko00000,ko03000	stage V sporulation protein
PIBGAFCF_01591	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PIBGAFCF_01592	5.24e-53	yabK	-	-	S	-	-	-	Peptide ABC transporter permease
PIBGAFCF_01593	3.37e-134	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PIBGAFCF_01594	1.4e-133	ctc	-	-	J	ko:K02897	ko03010,map03010	ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PIBGAFCF_01595	7.08e-223	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PIBGAFCF_01596	0.0	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PIBGAFCF_01597	4.23e-64	spoVG	-	-	D	ko:K06412	-	ko00000	Essential for sporulation. Interferes with or is a negative regulator of the pathway leading to asymmetric septation
PIBGAFCF_01598	7.5e-83	yabJ	3.5.99.10	-	J	ko:K09022	-	ko00000,ko01000	translation initiation inhibitor, yjgF family
PIBGAFCF_01599	5.43e-195	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
PIBGAFCF_01600	2.25e-205	ispE	2.7.1.148	-	I	ko:K00919,ko:K16924	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PIBGAFCF_01601	7.31e-38	sspF	-	-	S	ko:K06423	-	ko00000	DNA topological change
PIBGAFCF_01602	5.32e-53	veg	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_01603	1.46e-186	yabG	-	-	S	ko:K06436	-	ko00000	peptidase
PIBGAFCF_01604	9.41e-200	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PIBGAFCF_01605	3.1e-125	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PIBGAFCF_01606	3.55e-288	yabE	-	-	T	-	-	-	protein conserved in bacteria
PIBGAFCF_01607	1.44e-182	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD
PIBGAFCF_01608	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PIBGAFCF_01609	6.14e-58	abrB	-	-	K	ko:K06284	-	ko00000,ko03000	COG2002 Regulators of stationary sporulation gene expression
PIBGAFCF_01610	2.81e-201	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PIBGAFCF_01611	1.64e-62	yazA	-	-	L	ko:K07461	-	ko00000	endonuclease containing a URI domain
PIBGAFCF_01612	3.28e-177	yabB	2.1.1.223	-	S	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Conserved hypothetical protein 95
PIBGAFCF_01613	2.53e-55	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
PIBGAFCF_01614	6.33e-189	yaaT	-	-	S	-	-	-	stage 0 sporulation protein
PIBGAFCF_01615	5.75e-224	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
PIBGAFCF_01616	2.86e-92	yaaR	-	-	S	ko:K09770	-	ko00000	protein conserved in bacteria
PIBGAFCF_01617	5.03e-73	yaaQ	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_01618	7.14e-141	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PIBGAFCF_01619	0.0	yaaO	-	-	E	-	-	-	Orn Lys Arg decarboxylase
PIBGAFCF_01620	3.65e-225	yaaN	-	-	P	-	-	-	Belongs to the TelA family
PIBGAFCF_01621	1.05e-129	xpaC	-	-	S	-	-	-	5-bromo-4-chloroindolyl phosphate hydrolysis protein
PIBGAFCF_01622	3.55e-39	csfB	-	-	S	-	-	-	Inhibitor of sigma-G Gin
PIBGAFCF_01623	0.0	srfAB	-	-	Q	ko:K15654,ko:K15655,ko:K16120	ko01054,ko02024,map01054,map02024	ko00000,ko00001,ko01008	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PIBGAFCF_01624	0.0	srfAC	-	-	Q	ko:K15656,ko:K16121	ko01054,ko02024,map01054,map02024	ko00000,ko00001,ko01008	COG1020 Non-ribosomal peptide synthetase modules and related proteins
PIBGAFCF_01625	1.14e-175	srfAD	-	-	Q	ko:K15657	ko02024,map02024	ko00000,ko00001,ko01008	thioesterase
PIBGAFCF_01626	2.92e-314	-	-	-	E	-	-	-	Aminotransferase class I and II
PIBGAFCF_01627	5.87e-155	sfp	-	-	H	ko:K06133	ko00770,map00770	ko00000,ko00001,ko01000	Belongs to the P-Pant transferase superfamily
PIBGAFCF_01628	1.12e-137	yczE	-	-	S	ko:K07149	-	ko00000	membrane
PIBGAFCF_01629	1.32e-167	tcyC	-	-	E	ko:K10010	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1126 ABC-type polar amino acid transport system, ATPase component
PIBGAFCF_01630	5.85e-152	tcyB	-	-	P	ko:K10009	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0765 ABC-type amino acid transport system, permease component
PIBGAFCF_01631	8.12e-55	tcyA	-	-	ET	ko:K02424	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko02035	Belongs to the bacterial solute-binding protein 3 family
PIBGAFCF_01632	8.22e-86	tcyA	-	-	ET	ko:K02424	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko02035	Belongs to the bacterial solute-binding protein 3 family
PIBGAFCF_01633	2.91e-197	yclA	-	-	K	ko:K21755	-	ko00000,ko03000	LysR substrate binding domain
PIBGAFCF_01634	3.44e-130	ubiX	2.5.1.129	-	H	ko:K03186	ko00130,ko00627,ko00940,ko01100,ko01110,ko01120,ko01220,map00130,map00627,map00940,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
PIBGAFCF_01635	0.0	yclC	4.1.1.61, 4.1.1.98	-	H	ko:K01612,ko:K03182,ko:K16874	ko00130,ko00365,ko00627,ko01100,ko01110,ko01120,ko01220,map00130,map00365,map00627,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Decarboxylase involved in the decarboxylation and detoxification of phenolic derivatives under both aerobic and anaerobic conditions. It is able to catalyze the reversible decarboxylation of 4-hydroxybenzoate
PIBGAFCF_01636	6.46e-49	-	4.1.1.61	-	S	ko:K21759	ko00627,ko01120,ko01220,map00627,map01120,map01220	ko00000,ko00001,ko01000	response to toxic substance
PIBGAFCF_01637	8.93e-96	yclD	-	-	-	-	-	-	-
PIBGAFCF_01638	6.81e-300	comP	2.7.13.3	-	T	ko:K07680	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PIBGAFCF_01639	3.29e-147	comA	-	-	K	ko:K07691	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PIBGAFCF_01640	3.55e-77	yuxO	-	-	Q	-	-	-	protein, possibly involved in aromatic compounds catabolism
PIBGAFCF_01641	8.16e-77	mrpG	-	-	P	ko:K05571	-	ko00000,ko02000	COG1320 Multisubunit Na H antiporter, MnhG subunit
PIBGAFCF_01642	2.15e-49	mrpF	-	-	P	ko:K05570	-	ko00000,ko02000	Subunit F of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PIBGAFCF_01643	1.13e-97	mrpE	-	-	P	ko:K05569	-	ko00000,ko02000	Subunit E of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PIBGAFCF_01644	0.0	mrpD	-	-	CP	ko:K05568	-	ko00000,ko02000	Subunit D of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PIBGAFCF_01645	1.42e-65	mrpC	-	-	P	ko:K05567	-	ko00000,ko02000	Subunit C of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PIBGAFCF_01646	8.6e-88	mrpB	-	-	P	ko:K05566	-	ko00000,ko02000	Subunit B of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PIBGAFCF_01647	0.0	mrpA	-	-	CP	ko:K05565	-	ko00000,ko02000	COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit
PIBGAFCF_01649	1.71e-215	yufQ	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PIBGAFCF_01650	1.68e-232	yufP	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
PIBGAFCF_01651	0.0	yufO	3.6.3.17	-	S	ko:K02056	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PIBGAFCF_01652	7.9e-247	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC-type transport system, periplasmic component surface lipoprotein
PIBGAFCF_01653	3.8e-161	dcuR	-	-	T	ko:K02475,ko:K11615	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG4565 Response regulator of citrate malate metabolism
PIBGAFCF_01654	0.0	malK	2.7.13.3	-	T	ko:K11614,ko:K11637,ko:K11691	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Signal transduction histidine kinase regulating citrate malate metabolism
PIBGAFCF_01655	2.08e-97	yufK	-	-	S	-	-	-	Family of unknown function (DUF5366)
PIBGAFCF_01656	3.45e-53	yuxK	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_01657	0.0	pbpD	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555,ko:K18770	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	Penicillin-binding Protein
PIBGAFCF_01658	2.6e-240	yuxJ	-	-	EGP	-	-	-	Major facilitator superfamily
PIBGAFCF_01659	7.29e-149	kapD	-	-	L	ko:K06348	-	ko00000	the KinA pathway to sporulation
PIBGAFCF_01660	4.14e-81	kapB	-	-	G	ko:K06347	ko02020,map02020	ko00000,ko00001	Kinase associated protein B
PIBGAFCF_01661	5e-278	kinB2	2.7.13.3	-	T	ko:K07697	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PIBGAFCF_01662	1.89e-276	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
PIBGAFCF_01663	3.95e-51	yugE	-	-	S	-	-	-	Domain of unknown function (DUF1871)
PIBGAFCF_01664	3.41e-192	yugF	-	-	I	-	-	-	Hydrolase
PIBGAFCF_01665	1.07e-108	alaR	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_01666	2.28e-264	yugH	-	-	E	ko:K10907	-	ko00000,ko01000,ko01007	Aminotransferase
PIBGAFCF_01667	8.3e-82	yugI	-	-	J	ko:K07570,ko:K07571	-	ko00000	RNA binding protein (contains ribosomal protein S1 domain)
PIBGAFCF_01668	1.28e-45	yuzA	-	-	S	ko:K09779	-	ko00000	Domain of unknown function (DUF378)
PIBGAFCF_01669	7.5e-283	yugJ	-	-	C	ko:K19955	-	ko00000,ko01000	oxidoreductases, Fe-dependent alcohol dehydrogenase family
PIBGAFCF_01670	8.85e-288	yugK	-	-	C	ko:K19955	-	ko00000,ko01000	Dehydrogenase
PIBGAFCF_01671	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
PIBGAFCF_01673	4.57e-90	yugN	-	-	S	-	-	-	YugN-like family
PIBGAFCF_01674	8.97e-227	yugO	-	-	P	ko:K10716	-	ko00000,ko02000	COG1226 Kef-type K transport systems
PIBGAFCF_01675	2.98e-36	mstX	-	-	S	-	-	-	Membrane-integrating protein Mistic
PIBGAFCF_01676	3.56e-22	-	-	-	-	-	-	-	-
PIBGAFCF_01677	1.95e-149	yugP	-	-	S	ko:K06973	-	ko00000	Zn-dependent protease
PIBGAFCF_01678	1.82e-293	yugS	-	-	S	-	-	-	COG1253 Hemolysins and related proteins containing CBS domains
PIBGAFCF_01679	0.0	yugT	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	COG0366 Glycosidases
PIBGAFCF_01680	5.54e-236	npd	1.13.12.16	-	S	ko:K00459	ko00910,map00910	ko00000,ko00001,ko01000	COG2070 Dioxygenases related to 2-nitropropane dioxygenase
PIBGAFCF_01681	1.82e-52	-	-	-	-	-	-	-	-
PIBGAFCF_01682	1.68e-174	tgl	2.3.2.13	-	H	ko:K00686	-	ko00000,ko01000	Probably plays a role in the assembly of the spore coat proteins by catalyzing epsilon-(gamma-glutamyl)lysine cross-links
PIBGAFCF_01683	4.49e-285	mcpB	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis protein
PIBGAFCF_01684	0.0	mcpB	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis protein
PIBGAFCF_01685	0.0	mcpA	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis protein
PIBGAFCF_01686	0.0	mcpB	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis protein
PIBGAFCF_01687	1.08e-15	yraA	3.5.1.124	-	S	ko:K05520	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
PIBGAFCF_01688	2.09e-85	yraA	3.5.1.124	-	S	ko:K05520	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
PIBGAFCF_01689	4.84e-231	yulF	-	-	S	ko:K22230	ko00562,ko01120,map00562,map01120	ko00000,ko00001,ko01000	Oxidoreductase
PIBGAFCF_01690	2.73e-248	yubA	-	-	S	-	-	-	transporter activity
PIBGAFCF_01691	7.33e-184	uppP	3.6.1.27	-	V	ko:K06153	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PIBGAFCF_01693	7.36e-20	-	-	-	-	-	-	-	-
PIBGAFCF_01694	2.15e-177	-	-	-	S	ko:K06366	ko02024,map02024	ko00000,ko00001,ko01000	Aspartate phosphatase response regulator
PIBGAFCF_01697	2.17e-57	yjcN	-	-	-	-	-	-	-
PIBGAFCF_01698	2.36e-47	-	-	-	G	-	-	-	Cupin
PIBGAFCF_01699	6.24e-268	hmp	1.14.12.17, 1.18.1.3	-	C	ko:K05916,ko:K15765	ko00623,ko00920,ko01100,ko01120,ko01220,ko05132,map00623,map00920,map01100,map01120,map01220,map05132	ko00000,ko00001,ko00002,ko01000	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
PIBGAFCF_01700	2.27e-185	-	-	-	NU	-	-	-	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PIBGAFCF_01701	1.97e-152	ktrA	-	-	P	ko:K03499	-	ko00000,ko02000	COG0569 K transport systems, NAD-binding component
PIBGAFCF_01702	4.6e-119	yuaB	-	-	-	-	-	-	-
PIBGAFCF_01703	9.65e-119	yuaC	-	-	K	ko:K22109	-	ko00000,ko03000	Belongs to the GbsR family
PIBGAFCF_01704	0.0	gbsA	1.2.1.8	-	C	ko:K00130	ko00260,ko01100,map00260,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
PIBGAFCF_01705	9.64e-288	gbsB	1.1.1.1	-	C	ko:K11440	ko00260,ko01100,map00260,map01100	ko00000,ko00001,ko00002,ko01000	alcohol dehydrogenase
PIBGAFCF_01706	1.21e-134	-	-	-	S	-	-	-	MOSC domain
PIBGAFCF_01707	1.42e-102	yuaE	-	-	S	-	-	-	DinB superfamily
PIBGAFCF_01708	1.48e-104	yuaF	-	-	OU	-	-	-	Membrane protein implicated in regulation of membrane protease activity
PIBGAFCF_01709	1.38e-273	yuaG	-	-	S	ko:K07192	ko04910,map04910	ko00000,ko00001,ko03036,ko04131,ko04147	protein conserved in bacteria
PIBGAFCF_01710	3.55e-118	thiT	-	-	S	ko:K16789	-	ko00000,ko02000	Thiamine transporter protein (Thia_YuaJ)
PIBGAFCF_01711	7.59e-196	yokA	-	-	L	-	-	-	Recombinase
PIBGAFCF_01712	1.36e-111	yokF	3.1.31.1	-	L	ko:K01174	-	ko00000,ko01000	RNA catabolic process
PIBGAFCF_01713	7.74e-121	-	-	-	G	-	-	-	SMI1-KNR4 cell-wall
PIBGAFCF_01714	1e-170	-	-	-	V	-	-	-	HNH endonuclease
PIBGAFCF_01715	6.88e-20	-	-	-	V	-	-	-	HNH endonuclease
PIBGAFCF_01716	1.12e-286	-	-	-	L	ko:K21487	-	ko00000,ko01000,ko02048	A nuclease of the HNH/ENDO VII superfamily with conserved LHH
PIBGAFCF_01717	3.18e-67	-	-	-	S	ko:K21488	-	ko00000,ko02048	SMI1-KNR4 cell-wall
PIBGAFCF_01719	3.77e-225	bdhA	1.1.1.264, 1.1.1.303, 1.1.1.4	-	E	ko:K00004,ko:K00098	ko00650,map00650	ko00000,ko00001,ko01000	Dehydrogenase
PIBGAFCF_01720	7.81e-116	-	-	-	K	-	-	-	Transcriptional regulator, TetR family
PIBGAFCF_01721	0.0	pps	2.7.9.2	-	GT	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	phosphoenolpyruvate synthase
PIBGAFCF_01722	4.44e-150	-	3.2.1.8	-	G	ko:K01181	-	ko00000,ko01000	Glycosyl hydrolases family 11
PIBGAFCF_01723	0.0	xylB	2.7.1.17	-	G	ko:K00854	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	xylulose kinase
PIBGAFCF_01724	0.0	xylA	5.3.1.5	-	G	ko:K01805	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko01000	Belongs to the xylose isomerase family
PIBGAFCF_01725	6.16e-263	xylR	-	-	GK	-	-	-	ROK family
PIBGAFCF_01726	0.0	xynB	3.2.1.37	GH43	G	ko:K01198	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
PIBGAFCF_01727	8.41e-314	xynP	-	-	G	ko:K03292	-	ko00000	MFS/sugar transport protein
PIBGAFCF_01728	1.54e-271	cypA	1.14.14.46, 1.14.15.13	-	C	ko:K15468,ko:K16593,ko:K17474	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko00199,ko01000,ko01008	Cytochrome P450
PIBGAFCF_01729	6.66e-151	xlnB	3.2.1.8	-	G	ko:K01181	-	ko00000,ko01000	Glycosyl hydrolases family 11
PIBGAFCF_01733	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
PIBGAFCF_01734	8.18e-86	glnR	-	-	K	ko:K03713,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000,ko03000	transcriptional
PIBGAFCF_01735	3.09e-306	ynbB	-	-	P	-	-	-	COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance
PIBGAFCF_01736	9.64e-289	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PIBGAFCF_01737	2.58e-225	spoVK	-	-	O	ko:K06413	-	ko00000	stage V sporulation protein K
PIBGAFCF_01738	1.23e-112	cwlC	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	n-acetylmuramoyl-L-alanine amidase
PIBGAFCF_01739	3.03e-07	cwlC	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	n-acetylmuramoyl-L-alanine amidase
PIBGAFCF_01740	2.21e-132	ymaB	-	-	S	-	-	-	MutT family
PIBGAFCF_01741	5.94e-237	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PIBGAFCF_01742	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PIBGAFCF_01743	4.43e-77	nrdI	-	-	F	ko:K03647	-	ko00000	Probably involved in ribonucleotide reductase function
PIBGAFCF_01744	2.31e-29	ymzA	-	-	-	-	-	-	-
PIBGAFCF_01745	1.87e-53	-	-	-	-	-	-	-	-
PIBGAFCF_01746	9e-46	hfq	-	-	J	ko:K03666	ko02024,ko03018,ko05111,map02024,map03018,map05111	ko00000,ko00001,ko03019,ko03036	RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs
PIBGAFCF_01747	7.19e-210	miaA	2.5.1.75	-	J	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PIBGAFCF_01748	9.08e-72	ymaF	-	-	S	-	-	-	YmaF family
PIBGAFCF_01750	1.17e-62	ebrA	-	-	P	ko:K11814	-	ko00000,ko00002,ko02000	Small Multidrug Resistance protein
PIBGAFCF_01751	1.76e-70	ebrB	-	-	P	ko:K03297,ko:K11814,ko:K11815	-	ko00000,ko00002,ko02000	Small Multidrug Resistance protein
PIBGAFCF_01752	9.17e-100	ymaD	-	-	O	-	-	-	redox protein, regulator of disulfide bond formation
PIBGAFCF_01753	3.08e-151	ymaC	-	-	S	-	-	-	Replication protein
PIBGAFCF_01754	2.64e-07	-	-	-	-	-	-	-	-
PIBGAFCF_01755	9.4e-317	aprX	-	-	O	ko:K17734	-	ko00000,ko01000,ko01002	Belongs to the peptidase S8 family
PIBGAFCF_01756	9.32e-81	ymzB	-	-	-	-	-	-	-
PIBGAFCF_01757	3.52e-149	yoaK	-	-	S	-	-	-	Membrane
PIBGAFCF_01758	3e-93	nucB	-	-	M	-	-	-	Deoxyribonuclease NucA/NucB
PIBGAFCF_01759	4.53e-283	cypA	1.14.14.46	-	C	ko:K15468,ko:K16593	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko00002,ko00199,ko01000,ko01008	Cytochrome P450
PIBGAFCF_01760	0.0	-	-	-	HQ	ko:K13615	-	ko00000,ko01004,ko01008	Beta-ketoacyl synthase
PIBGAFCF_01761	0.0	-	-	-	IQ	ko:K13611,ko:K13614	-	ko00000,ko01004,ko01008	polyketide synthase
PIBGAFCF_01762	0.0	-	-	-	Q	ko:K13612,ko:K13613	-	ko00000,ko01004,ko01008	Polyketide synthase of type I
PIBGAFCF_01763	0.0	-	-	-	Q	ko:K13612,ko:K13613	-	ko00000,ko01004,ko01008	Polyketide synthase of type I
PIBGAFCF_01764	0.0	-	-	-	Q	ko:K13612,ko:K13613	-	ko00000,ko01004,ko01008	Polyketide synthase of type I
PIBGAFCF_01765	0.0	-	-	-	IQ	ko:K13611,ko:K13614	-	ko00000,ko01004,ko01008	polyketide synthase
PIBGAFCF_01766	6.35e-176	pksI	-	-	I	ko:K15313	-	ko00000,ko01008	Belongs to the enoyl-CoA hydratase isomerase family
PIBGAFCF_01767	7.4e-179	-	-	-	I	ko:K15312	-	ko00000,ko01008	enoyl-CoA hydratase
PIBGAFCF_01768	9.98e-307	pksG	2.3.3.10	-	I	ko:K01641,ko:K15311	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01008	synthase
PIBGAFCF_01769	6.16e-48	acpK	-	-	IQ	ko:K15337	-	ko00000,ko01008	Phosphopantetheine attachment site
PIBGAFCF_01770	0.0	fabD	2.3.1.39	-	I	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	malonyl CoA-acyl carrier protein transacylase
PIBGAFCF_01771	9.59e-220	pksD	-	-	Q	ko:K15328	-	ko00000,ko01008	Acyl transferase domain
PIBGAFCF_01772	1.77e-202	fabD	2.3.1.39	-	I	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	malonyl CoA-acyl carrier protein transacylase
PIBGAFCF_01773	3.58e-160	pksB	3.1.2.6	-	S	ko:K01069	ko00620,map00620	ko00000,ko00001,ko01000	Polyketide biosynthesis
PIBGAFCF_01774	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PIBGAFCF_01775	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PIBGAFCF_01776	3.93e-116	cotE	-	-	S	ko:K06328	-	ko00000	Spore coat protein
PIBGAFCF_01777	2.37e-85	ymcA	3.6.3.21	-	S	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	Belongs to the UPF0342 family
PIBGAFCF_01778	0.0	miaB	2.8.4.3	-	J	ko:K06168	-	ko00000,ko01000,ko03016	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PIBGAFCF_01779	2.28e-270	kbl	2.3.1.29, 2.3.1.47	-	H	ko:K00639,ko:K00652	ko00260,ko00780,ko01100,map00260,map00780,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide
PIBGAFCF_01780	1.32e-247	tdh	1.1.1.103	-	C	ko:K00060	ko00260,map00260	ko00000,ko00001,ko01000	Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate
PIBGAFCF_01781	2.44e-49	spoVS	-	-	S	ko:K06416	-	ko00000	Stage V sporulation protein S
PIBGAFCF_01782	3.06e-195	ymdB	-	-	S	ko:K02029,ko:K02030,ko:K09769	-	ko00000,ko00002,ko02000	protein conserved in bacteria
PIBGAFCF_01783	2.91e-308	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
PIBGAFCF_01784	4.31e-260	pbpX	-	-	V	-	-	-	Beta-lactamase
PIBGAFCF_01785	8.4e-237	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PIBGAFCF_01786	2.57e-291	cinA	3.5.1.42	-	S	ko:K03742,ko:K03743	ko00760,map00760	ko00000,ko00001,ko01000	Belongs to the CinA family
PIBGAFCF_01787	2.75e-131	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PIBGAFCF_01788	2.26e-166	ymfM	-	-	S	ko:K15539	-	ko00000	protein conserved in bacteria
PIBGAFCF_01789	3.66e-182	ymfK	-	-	S	-	-	-	Protein of unknown function (DUF3388)
PIBGAFCF_01790	6.23e-56	ymfJ	-	-	S	-	-	-	Protein of unknown function (DUF3243)
PIBGAFCF_01791	1.13e-161	ymfI	1.1.1.100	-	S	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
PIBGAFCF_01792	2.09e-303	ymfH	-	-	S	-	-	-	zinc protease
PIBGAFCF_01793	8.12e-300	albE	-	-	S	-	-	-	Peptidase M16
PIBGAFCF_01794	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	drug exporters of the RND superfamily
PIBGAFCF_01795	7.8e-97	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PIBGAFCF_01796	1.6e-289	ymfD	-	-	EGP	ko:K08221	-	ko00000,ko02000	COG0477 Permeases of the major facilitator superfamily
PIBGAFCF_01797	1.38e-166	ymfC	-	-	K	ko:K03710	-	ko00000,ko03000	Transcriptional regulator
PIBGAFCF_01798	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
PIBGAFCF_01799	7.4e-41	-	-	-	S	-	-	-	YlzJ-like protein
PIBGAFCF_01800	5.34e-165	tepA	-	-	OU	-	-	-	COG0740 Protease subunit of ATP-dependent Clp proteases
PIBGAFCF_01801	0.0	rnjB	-	-	S	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PIBGAFCF_01802	7.2e-202	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PIBGAFCF_01803	3.69e-278	dapG	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
PIBGAFCF_01804	8.84e-243	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PIBGAFCF_01805	2.43e-48	spoVFB	-	-	H	ko:K06411	-	ko00000	Together with DpaA, catalyzes the conversion of dihydrodipicolinate to dipicolinate (DPA)
PIBGAFCF_01806	7.23e-99	hsp	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Hsp20/alpha crystallin family
PIBGAFCF_01807	6.24e-214	pre	-	-	D	-	-	-	plasmid recombination enzyme
PIBGAFCF_01808	5.2e-108	-	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_01812	1.08e-224	-	-	-	L	-	-	-	Replication protein
PIBGAFCF_01815	1.82e-17	-	-	-	L	ko:K06400	-	ko00000	Recombinase
PIBGAFCF_01816	5.57e-159	sigK	-	-	K	ko:K03091	-	ko00000,ko03021	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PIBGAFCF_01817	2.47e-274	-	-	-	EGP	-	-	-	Transmembrane secretion effector
PIBGAFCF_01818	9.72e-08	-	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
PIBGAFCF_01820	1.97e-35	yqeD	-	-	S	-	-	-	SNARE associated Golgi protein
PIBGAFCF_01821	1.33e-32	yqeD	-	-	S	-	-	-	SNARE associated Golgi protein
PIBGAFCF_01822	3.16e-178	pdaC	3.5.1.104	-	G	ko:K22278	-	ko00000,ko01000	Polysaccharide deacetylase
PIBGAFCF_01823	3.99e-176	yqeF	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
PIBGAFCF_01825	5.51e-123	yqeG	-	-	S	ko:K07015	-	ko00000	hydrolase of the HAD superfamily
PIBGAFCF_01826	1.87e-270	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	In Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
PIBGAFCF_01827	2.83e-199	aroE	1.1.1.25	-	E	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PIBGAFCF_01828	1.81e-60	yhbY	-	-	J	ko:K07574	-	ko00000,ko03009	RNA-binding protein containing KH domain, possibly ribosomal protein
PIBGAFCF_01829	3.25e-137	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PIBGAFCF_01830	3.25e-131	yqeK	-	-	H	-	-	-	HD superfamily hydrolase involved in NAD metabolism
PIBGAFCF_01831	9.39e-80	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PIBGAFCF_01832	1.98e-177	yqeM	-	-	Q	-	-	-	Methyltransferase
PIBGAFCF_01833	1.14e-190	comER	-	-	E	ko:K02239	-	ko00000,ko00002,ko02044	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PIBGAFCF_01834	1.69e-135	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	COG1555 DNA uptake protein and related DNA-binding proteins
PIBGAFCF_01835	3.79e-136	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	ComE operon protein 2
PIBGAFCF_01836	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
PIBGAFCF_01837	6.09e-231	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
PIBGAFCF_01838	1.91e-47	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
PIBGAFCF_01839	1.02e-259	gpr	3.4.24.78	-	C	ko:K06012	-	ko00000,ko01000,ko01002	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
PIBGAFCF_01840	2.6e-279	spoIIP	-	-	M	ko:K06385	-	ko00000	stage II sporulation protein P
PIBGAFCF_01841	2.1e-71	yqxA	-	-	S	-	-	-	Protein of unknown function (DUF3679)
PIBGAFCF_01842	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PIBGAFCF_01843	3.95e-274	hemN	-	-	H	-	-	-	Involved in the biosynthesis of porphyrin-containing compound
PIBGAFCF_01844	1.11e-239	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PIBGAFCF_01845	1.99e-104	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PIBGAFCF_01846	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
PIBGAFCF_01847	6.71e-264	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PIBGAFCF_01848	1.27e-222	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Methylates ribosomal protein L11
PIBGAFCF_01849	3.96e-178	rsmE	2.1.1.193	-	J	ko:K09761	-	ko00000,ko01000,ko03009	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PIBGAFCF_01850	0.0	yqeV	2.8.4.5	-	J	ko:K18707	-	ko00000,ko01000,ko03016	ribosomal protein S12 methylthiotransferase
PIBGAFCF_01851	1.99e-194	yqeW	-	-	P	ko:K03324	-	ko00000,ko02000	COG1283 Na phosphate symporter
PIBGAFCF_01852	1.03e-26	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
PIBGAFCF_01853	7.84e-91	yqeY	-	-	S	ko:K09117	-	ko00000	Yqey-like protein
PIBGAFCF_01854	3.91e-288	yqeZ	-	-	O	ko:K07403	-	ko00000	COG1030 Membrane-bound serine protease (ClpP class)
PIBGAFCF_01855	1.22e-186	yqfA	-	-	S	-	-	-	UPF0365 protein
PIBGAFCF_01856	6.35e-49	yqfB	-	-	-	-	-	-	-
PIBGAFCF_01857	3.57e-61	yqfC	-	-	S	-	-	-	sporulation protein YqfC
PIBGAFCF_01858	3.96e-273	yqfD	-	-	S	ko:K06438	-	ko00000	Stage IV sporulation
PIBGAFCF_01859	4.78e-222	phoH	-	-	T	ko:K06217	-	ko00000	Phosphate starvation-inducible protein PhoH
PIBGAFCF_01860	0.0	yqfF	-	-	S	ko:K07037	-	ko00000	membrane-associated HD superfamily hydrolase
PIBGAFCF_01861	2.91e-104	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PIBGAFCF_01862	8.76e-82	dgkA	2.7.1.107, 2.7.1.66	-	M	ko:K00887,ko:K00901	ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231	ko00000,ko00001,ko01000	Diacylglycerol kinase
PIBGAFCF_01863	1.92e-92	cdd	3.5.4.5	-	F	ko:K01489	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
PIBGAFCF_01864	2.86e-214	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PIBGAFCF_01865	6e-24	-	-	-	S	-	-	-	YqzL-like protein
PIBGAFCF_01866	2.31e-181	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
PIBGAFCF_01867	2.03e-220	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
PIBGAFCF_01868	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
PIBGAFCF_01869	3.41e-144	ccpN	-	-	K	-	-	-	CBS domain
PIBGAFCF_01870	1.75e-188	yqfL	2.7.11.33, 2.7.4.28	-	S	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PIBGAFCF_01871	4.54e-111	yqxD	-	-	S	ko:K09768	-	ko00000	Belongs to the UPF0178 family
PIBGAFCF_01872	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PIBGAFCF_01873	8e-255	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PIBGAFCF_01874	7.67e-80	cccA	-	-	C	ko:K13300	-	ko00000	COG2010 Cytochrome c, mono- and diheme variants
PIBGAFCF_01875	1.65e-159	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
PIBGAFCF_01876	2.97e-266	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PIBGAFCF_01877	4.12e-225	ispH	1.17.7.4	-	IM	ko:K03527	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PIBGAFCF_01878	7.12e-57	yqfQ	-	-	S	-	-	-	YqfQ-like protein
PIBGAFCF_01879	3.91e-304	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PIBGAFCF_01880	9.16e-209	nfo	3.1.21.2	-	L	ko:K01151	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PIBGAFCF_01881	8.63e-49	yqfT	-	-	S	-	-	-	Protein of unknown function (DUF2624)
PIBGAFCF_01882	2.47e-195	yqfU	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2179)
PIBGAFCF_01883	2.63e-99	zur	-	-	P	ko:K02076	-	ko00000,ko03000	Belongs to the Fur family
PIBGAFCF_01884	3.23e-139	yqfW	-	-	S	ko:K05967	-	ko00000	Belongs to the 5'(3')-deoxyribonucleotidase family
PIBGAFCF_01885	2.26e-78	yqfX	-	-	S	-	-	-	membrane
PIBGAFCF_01886	1.09e-253	ispG	1.17.7.1, 1.17.7.3	-	I	ko:K03526	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
PIBGAFCF_01887	9.88e-58	yqfZ	-	-	M	ko:K06417	-	ko00000	LysM domain
PIBGAFCF_01888	8.5e-165	yqgB	-	-	S	-	-	-	Protein of unknown function (DUF1189)
PIBGAFCF_01889	7.59e-97	yqgC	-	-	S	ko:K09793	-	ko00000	protein conserved in bacteria
PIBGAFCF_01890	4.22e-148	sodA	1.15.1.1	-	P	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	ko00000,ko00001,ko01000	radicals which are normally produced within the cells and which are toxic to biological systems
PIBGAFCF_01891	5.94e-283	yqgE	-	-	EGP	ko:K08222	-	ko00000,ko02000	Major facilitator superfamily
PIBGAFCF_01892	0.0	pbpA	-	-	M	ko:K21465,ko:K21466	ko00550,map00550	ko00000,ko00001,ko01011	penicillin-binding protein
PIBGAFCF_01893	6.14e-204	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
PIBGAFCF_01894	1.75e-203	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
PIBGAFCF_01895	1.88e-195	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease
PIBGAFCF_01896	2.99e-179	pstBA	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PIBGAFCF_01897	2.71e-187	pstB	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PIBGAFCF_01898	1.97e-96	yqzC	-	-	S	-	-	-	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PIBGAFCF_01899	3.42e-68	yqzD	-	-	-	-	-	-	-
PIBGAFCF_01900	6.25e-29	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
PIBGAFCF_01901	1.16e-114	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PIBGAFCF_01902	5.38e-11	yqgO	-	-	-	-	-	-	-
PIBGAFCF_01903	2.58e-269	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter
PIBGAFCF_01904	1.87e-37	yqgQ	-	-	S	-	-	-	Protein conserved in bacteria
PIBGAFCF_01905	1.18e-227	glcK	2.7.1.2	-	G	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Glucokinase
PIBGAFCF_01906	1.33e-256	yqgT	3.4.19.11	-	E	ko:K01308	-	ko00000,ko01000,ko01002	Gamma-D-glutamyl-L-diamino acid endopeptidase
PIBGAFCF_01907	1.57e-239	yqgU	-	-	-	-	-	-	-
PIBGAFCF_01908	2.02e-63	dglA	-	-	S	-	-	-	Thiamine-binding protein
PIBGAFCF_01909	1.07e-28	yqgW	-	-	S	-	-	-	Protein of unknown function (DUF2759)
PIBGAFCF_01910	2e-156	yqgX	3.1.2.6	-	S	ko:K01069	ko00620,map00620	ko00000,ko00001,ko01000	COG0491 Zn-dependent hydrolases, including glyoxylases
PIBGAFCF_01911	4.19e-50	yqgY	-	-	S	-	-	-	Protein of unknown function (DUF2626)
PIBGAFCF_01912	2.15e-82	yqgZ	1.20.4.1	-	P	ko:K00537,ko:K16509	-	ko00000,ko01000	Belongs to the ArsC family
PIBGAFCF_01914	2.41e-175	yqhA	-	-	T	ko:K17763	-	ko00000,ko03021	COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PIBGAFCF_01915	7.43e-295	yqhB	-	-	S	-	-	-	COG1253 Hemolysins and related proteins containing CBS domains
PIBGAFCF_01916	1.34e-231	yqxL	-	-	P	-	-	-	Mg2 transporter protein
PIBGAFCF_01917	5.85e-253	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
PIBGAFCF_01918	5.79e-227	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	COG1459 Type II secretory pathway, component PulF
PIBGAFCF_01919	1.5e-64	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	Required for transformation and DNA binding
PIBGAFCF_01920	3.1e-91	-	-	-	NU	ko:K02246,ko:K08084	-	ko00000,ko00002,ko02044	Tfp pilus assembly protein FimT
PIBGAFCF_01921	1.56e-26	comGE	-	-	-	ko:K02247	-	ko00000,ko00002,ko02044	-
PIBGAFCF_01922	2.45e-28	comGF	-	-	U	ko:K02248	-	ko00000,ko00002,ko02044	Putative Competence protein ComGF
PIBGAFCF_01923	8.44e-75	-	-	-	S	ko:K02249	-	ko00000,ko00002,ko02044	ComG operon protein 7
PIBGAFCF_01924	9.56e-35	yqzE	-	-	S	-	-	-	YqzE-like protein
PIBGAFCF_01925	3.98e-70	yqzG	-	-	S	-	-	-	Protein of unknown function (DUF3889)
PIBGAFCF_01926	7.32e-144	yqxM	-	-	-	ko:K19433	-	ko00000	-
PIBGAFCF_01927	5.48e-95	sipW	3.4.21.89	-	U	ko:K13280	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	Signal peptidase
PIBGAFCF_01928	8.28e-178	tasA_1	-	-	S	ko:K06336	-	ko00000,ko01002	Cell division protein FtsN
PIBGAFCF_01929	2.27e-71	sinR	-	-	K	ko:K19449	-	ko00000,ko03000	transcriptional
PIBGAFCF_01930	1.3e-29	sinI	-	-	S	ko:K06372	-	ko00000	Anti-repressor SinI
PIBGAFCF_01931	8.42e-193	yqhG	-	-	S	-	-	-	Bacterial protein YqhG of unknown function
PIBGAFCF_01932	0.0	yqhH	-	-	L	-	-	-	COG0553 Superfamily II DNA RNA helicases, SNF2 family
PIBGAFCF_01933	7.69e-254	gcvT	2.1.2.10	-	E	ko:K00605	ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002,ko01000	The glycine cleavage system catalyzes the degradation of glycine
PIBGAFCF_01934	2.14e-313	gcvPA	1.4.4.2	-	E	ko:K00282	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko01000	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PIBGAFCF_01935	0.0	gcvPB	1.4.4.2	-	E	ko:K00283	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko01000	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PIBGAFCF_01936	2.33e-84	yqhL	-	-	P	-	-	-	COG0607 Rhodanese-related sulfurtransferase
PIBGAFCF_01937	1.25e-201	lipM	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domain of GcvH, an intermediate carrier during protein lipoylation
PIBGAFCF_01938	1.14e-96	mntR	-	-	K	ko:K03709	-	ko00000,ko03000	Involved in manganese homeostasis. Might activate the transcription of the mntABCD operon
PIBGAFCF_01939	2.51e-203	yqhO	-	-	S	ko:K07001	-	ko00000	esterase of the alpha-beta hydrolase superfamily
PIBGAFCF_01940	8.59e-80	yqhP	-	-	-	-	-	-	-
PIBGAFCF_01941	1.12e-215	yqhQ	-	-	S	-	-	-	Protein of unknown function (DUF1385)
PIBGAFCF_01942	2.13e-113	yqhR	-	-	S	-	-	-	Conserved membrane protein YqhR
PIBGAFCF_01943	2.75e-245	yqhT	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	COG0006 Xaa-Pro aminopeptidase
PIBGAFCF_01944	9.69e-128	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PIBGAFCF_01945	1.64e-48	yqhV	-	-	S	-	-	-	Protein of unknown function (DUF2619)
PIBGAFCF_01946	7.55e-213	spoIIIAA	-	-	S	ko:K06390	-	ko00000	stage III sporulation protein AA
PIBGAFCF_01947	2.23e-108	spoIIIAB	-	-	S	ko:K06391	-	ko00000	Stage III sporulation protein
PIBGAFCF_01948	1.63e-39	spoIIIAC	-	-	S	ko:K06392	-	ko00000	stage III sporulation protein AC
PIBGAFCF_01949	5.28e-55	spoIIIAD	-	-	S	ko:K06393	-	ko00000	Stage III sporulation protein AD
PIBGAFCF_01950	3.02e-260	spoIIIAE	-	-	S	ko:K06394	-	ko00000	stage III sporulation protein AE
PIBGAFCF_01951	4.98e-129	spoIIIAF	-	-	S	ko:K06395	-	ko00000	Stage III sporulation protein AF (Spore_III_AF)
PIBGAFCF_01952	1.3e-145	spoIIIAG	-	-	S	ko:K06396	-	ko00000	stage III sporulation protein AG
PIBGAFCF_01953	1.88e-86	spoIIIAH	-	-	S	ko:K06397	-	ko00000	SpoIIIAH-like protein
PIBGAFCF_01954	2.59e-83	accB	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PIBGAFCF_01955	0.0	accC	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
PIBGAFCF_01956	5.53e-87	yqhY	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_01957	2.58e-85	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PIBGAFCF_01958	2.51e-199	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PIBGAFCF_01959	5.36e-308	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PIBGAFCF_01960	4.44e-51	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PIBGAFCF_01961	7.16e-201	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PIBGAFCF_01962	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PIBGAFCF_01963	2.69e-193	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	rRNA methylase
PIBGAFCF_01964	1.03e-100	argR	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
PIBGAFCF_01965	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
PIBGAFCF_01966	5.48e-298	spoIVB	3.4.21.116	-	M	ko:K06399	-	ko00000,ko01000,ko01002	Stage IV sporulation protein B
PIBGAFCF_01967	4.13e-185	spo0A	-	-	KT	ko:K07699	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process
PIBGAFCF_01969	7.14e-259	alr	5.1.1.1	-	E	ko:K01775	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PIBGAFCF_01972	2.85e-266	yqiG	-	-	C	-	-	-	COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family
PIBGAFCF_01974	3.85e-144	-	-	-	K	-	-	-	Protein of unknown function (DUF1232)
PIBGAFCF_01975	2.52e-119	-	-	-	P	-	-	-	Probably functions as a manganese efflux pump
PIBGAFCF_01977	1.94e-127	lytC_1	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	Cell wall hydrolase autolysin
PIBGAFCF_01978	1.04e-163	yqiK	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
PIBGAFCF_01979	9.92e-266	mmgA	2.3.1.9	-	I	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
PIBGAFCF_01980	1.86e-185	mmgB	1.1.1.157	-	I	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	ko00000,ko00001,ko01000	Dehydrogenase
PIBGAFCF_01981	1.94e-125	mmgC	-	-	I	ko:K18244	-	ko00000,ko01000	acyl-CoA dehydrogenase
PIBGAFCF_01982	9.44e-109	mmgC	-	-	I	ko:K18244	-	ko00000,ko01000	acyl-CoA dehydrogenase
PIBGAFCF_01983	9.85e-261	mmgD	2.3.3.1	-	C	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Belongs to the citrate synthase family
PIBGAFCF_01984	0.0	prpD	4.2.1.79	-	S	ko:K01720	ko00640,map00640	ko00000,ko00001,ko01000	2-methylcitrate dehydratase
PIBGAFCF_01985	7.1e-199	prpB	4.1.3.30, 5.4.2.9	-	G	ko:K01841,ko:K03417	ko00440,ko00640,ko01100,ko01120,ko01130,map00440,map00640,map01100,map01120,map01130	ko00000,ko00001,ko01000	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
PIBGAFCF_01986	7.32e-46	yqzF	-	-	S	-	-	-	Protein of unknown function (DUF2627)
PIBGAFCF_01987	0.0	bkdR	-	-	KT	-	-	-	Transcriptional regulator
PIBGAFCF_01988	2.17e-191	ptb	2.3.1.19	-	C	ko:K00634	ko00650,ko01100,map00650,map01100	ko00000,ko00001,ko01000	phosphate butyryltransferase
PIBGAFCF_01989	5.27e-260	ldh	1.4.1.9	-	E	ko:K00263	ko00280,ko00290,ko01100,ko01110,ko01130,map00280,map00290,map01100,map01110,map01130	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
PIBGAFCF_01990	3.86e-260	buk	2.7.2.7	-	C	ko:K00929	ko00650,ko01100,map00650,map01100	ko00000,ko00001,ko01000	Belongs to the acetokinase family
PIBGAFCF_01991	0.0	bfmBC	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
PIBGAFCF_01992	4.18e-217	bfmBAA	1.2.4.4	-	C	ko:K00166	ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130	br01601,ko00000,ko00001,ko00002,ko01000	COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
PIBGAFCF_01993	4e-234	bfmBAB	1.2.4.4	-	C	ko:K00167,ko:K21417	ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130	br01601,ko00000,ko00001,ko00002,ko01000	COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
PIBGAFCF_01994	2.69e-265	bkdB	2.3.1.12, 2.3.1.168	-	C	ko:K00627,ko:K09699	ko00010,ko00020,ko00280,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00280,map00620,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PIBGAFCF_01995	3.22e-214	bmrU	-	-	I	-	-	-	COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
PIBGAFCF_01996	1.68e-99	yqiW	-	-	S	-	-	-	Belongs to the UPF0403 family
PIBGAFCF_01997	6.26e-170	artP	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 3 family
PIBGAFCF_01998	6.03e-141	artQ	-	-	E	ko:K02029	-	ko00000,ko00002,ko02000	COG0765 ABC-type amino acid transport system, permease component
PIBGAFCF_01999	2.77e-161	artM	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	COG1126 ABC-type polar amino acid transport system, ATPase component
PIBGAFCF_02000	1.79e-216	yqjA	-	-	S	-	-	-	Putative aromatic acid exporter C-terminal domain
PIBGAFCF_02001	3.99e-118	yqjB	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_02003	6.09e-92	mce	5.1.99.1	-	E	ko:K05606	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	COG0346 Lactoylglutathione lyase and related lyases
PIBGAFCF_02004	0.0	yqjD	2.1.3.15, 6.4.1.3	-	I	ko:K01966	ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
PIBGAFCF_02005	5.04e-257	yqjE	3.4.11.14, 3.4.11.4	-	E	ko:K01258,ko:K01263	-	ko00000,ko01000,ko01002	COG2195 Di- and tripeptidases
PIBGAFCF_02006	6.56e-188	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PIBGAFCF_02007	1.36e-36	yqzJ	-	-	-	-	-	-	-
PIBGAFCF_02008	7.78e-294	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PIBGAFCF_02009	0.0	gnd	1.1.1.343, 1.1.1.44	-	G	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PIBGAFCF_02010	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PIBGAFCF_02011	2.97e-215	rnz	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PIBGAFCF_02012	4.44e-27	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
PIBGAFCF_02013	2.4e-184	yqjL	-	-	S	-	-	-	hydrolases or acyltransferases (alpha beta hydrolase superfamily)
PIBGAFCF_02014	7.32e-247	namA	1.6.99.1	-	C	ko:K00354	-	ko00000,ko01000	Catalyzes the reduction of the double bond of an array of alpha,beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes
PIBGAFCF_02015	2.42e-61	-	-	-	S	-	-	-	GlpM protein
PIBGAFCF_02016	9.08e-202	-	-	-	K	-	-	-	LysR substrate binding domain
PIBGAFCF_02017	7.56e-181	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PIBGAFCF_02018	1.11e-213	yqjP	-	-	S	-	-	-	COG0491 Zn-dependent hydrolases, including glyoxylases
PIBGAFCF_02019	2.99e-174	yqjQ	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
PIBGAFCF_02020	4.1e-307	dsdA	4.3.1.18	-	E	ko:K01753	ko00260,map00260	ko00000,ko00001,ko01000	Belongs to the serine threonine dehydratase family. DsdA subfamily
PIBGAFCF_02021	3.01e-225	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
PIBGAFCF_02023	5.73e-206	yueF	-	-	S	-	-	-	transporter activity
PIBGAFCF_02025	7.27e-73	-	-	-	S	-	-	-	YolD-like protein
PIBGAFCF_02026	6.1e-295	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PIBGAFCF_02027	2.7e-113	yqjY	-	-	K	ko:K06977	-	ko00000	acetyltransferase
PIBGAFCF_02028	1.92e-08	yqjZ	-	-	S	-	-	-	enzyme involved in biosynthesis of extracellular polysaccharides
PIBGAFCF_02029	4.54e-211	yqkA	-	-	K	-	-	-	GrpB protein
PIBGAFCF_02030	1.22e-76	yqkB	-	-	S	-	-	-	Belongs to the HesB IscA family
PIBGAFCF_02031	7.88e-54	yqkC	-	-	S	-	-	-	Protein of unknown function (DUF2552)
PIBGAFCF_02032	2.61e-213	yqkD	-	-	S	ko:K06889	-	ko00000	COG1073 Hydrolases of the alpha beta superfamily
PIBGAFCF_02033	3.06e-15	yqkE	-	-	S	-	-	-	Protein of unknown function (DUF3886)
PIBGAFCF_02034	2.34e-211	yqkF	-	-	C	-	-	-	oxidoreductases (related to aryl-alcohol dehydrogenases)
PIBGAFCF_02035	5.78e-10	-	-	-	S	-	-	-	Protein of unknown function (DUF3936)
PIBGAFCF_02036	1.42e-120	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	Belongs to the Nudix hydrolase family
PIBGAFCF_02037	1.43e-271	yqxK	-	-	L	-	-	-	DNA helicase
PIBGAFCF_02038	2.32e-75	ansR	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_02039	4.88e-236	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase
PIBGAFCF_02040	0.0	aspA	4.3.1.1	-	E	ko:K01744	ko00250,ko01100,map00250,map01100	ko00000,ko00001,ko01000	Aspartate ammonia-lyase
PIBGAFCF_02041	3.56e-313	mleN	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter
PIBGAFCF_02042	1.87e-306	mleA	1.1.1.38	-	C	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	ko00000,ko00001,ko01000	malic enzyme
PIBGAFCF_02043	2.91e-32	-	-	-	-	-	-	-	-
PIBGAFCF_02044	2.87e-43	yqkK	-	-	-	-	-	-	-
PIBGAFCF_02045	4.12e-141	spoIIM	-	-	S	ko:K06384	-	ko00000	Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane
PIBGAFCF_02046	3.08e-102	fur	-	-	P	ko:K03711	-	ko00000,ko03000	Belongs to the Fur family
PIBGAFCF_02047	2.73e-50	-	-	-	S	-	-	-	Protein of unknown function (DUF4227)
PIBGAFCF_02048	1.78e-210	xerD	-	-	L	ko:K04763	-	ko00000,ko03036	recombinase XerD
PIBGAFCF_02049	4.39e-288	deoB	5.4.2.7	-	G	ko:K01839	ko00030,ko00230,map00030,map00230	ko00000,ko00001,ko01000	Phosphotransfer between the C1 and C5 carbon atoms of pentose
PIBGAFCF_02050	8.69e-190	punA	2.4.2.1, 2.4.2.28	-	F	ko:K00772,ko:K03783	ko00230,ko00240,ko00270,ko00760,ko01100,ko01110,map00230,map00240,map00270,map00760,map01100,map01110	ko00000,ko00001,ko00002,ko01000	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
PIBGAFCF_02051	5.58e-270	dacF	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PIBGAFCF_02052	1.98e-76	spoIIAA	-	-	T	ko:K06378	-	ko00000	Belongs to the anti-sigma-factor antagonist family
PIBGAFCF_02053	4.77e-100	spoIIAB	2.7.11.1	-	F	ko:K06379	-	ko00000,ko01000	Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti-anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition
PIBGAFCF_02054	6.81e-174	sigF	-	-	K	ko:K03091	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PIBGAFCF_02055	9.1e-141	spoVAA	-	-	S	ko:K06403	-	ko00000	Stage V sporulation protein AA
PIBGAFCF_02056	7.71e-90	spoVAB	-	-	S	ko:K06404	-	ko00000	Stage V sporulation protein AB
PIBGAFCF_02057	2.85e-103	spoVAC	-	-	S	ko:K06405	-	ko00000	stage V sporulation protein AC
PIBGAFCF_02058	9.17e-241	spoVAD	-	-	I	ko:K06406	-	ko00000	Stage V sporulation protein AD
PIBGAFCF_02059	3.57e-74	spoVAEB	-	-	S	ko:K06407	-	ko00000	stage V sporulation protein
PIBGAFCF_02060	1.2e-138	-	-	-	S	ko:K06407	-	ko00000	stage V sporulation protein
PIBGAFCF_02061	0.0	spoVAF	-	-	EG	ko:K06408	-	ko00000	Stage V sporulation protein AF
PIBGAFCF_02062	0.0	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PIBGAFCF_02063	3.35e-194	ypuA	-	-	S	-	-	-	Secreted protein
PIBGAFCF_02064	1.18e-103	ppiB	5.2.1.8	-	O	ko:K01802,ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PIBGAFCF_02065	6.23e-102	ccdC1	-	-	O	-	-	-	Protein of unknown function (DUF1453)
PIBGAFCF_02066	2.37e-124	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
PIBGAFCF_02067	7.86e-68	ypuD	-	-	-	-	-	-	-
PIBGAFCF_02068	1.24e-257	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PIBGAFCF_02069	1.09e-141	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin synthase
PIBGAFCF_02070	8.2e-288	ribBA	3.5.4.25, 4.1.99.12	-	H	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PIBGAFCF_02071	1.4e-105	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PIBGAFCF_02072	1.12e-83	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PIBGAFCF_02073	2.41e-113	ypuF	-	-	S	ko:K09763	-	ko00000	Domain of unknown function (DUF309)
PIBGAFCF_02075	4.93e-165	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PIBGAFCF_02076	1.3e-131	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PIBGAFCF_02077	5.9e-107	ypuI	-	-	S	-	-	-	Protein of unknown function (DUF3907)
PIBGAFCF_02078	2.36e-268	dacB	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PIBGAFCF_02079	6.22e-134	spmA	-	-	S	ko:K06373	-	ko00000	Spore maturation protein
PIBGAFCF_02080	7.39e-115	spmB	-	-	S	ko:K06374	-	ko00000	Spore maturation protein
PIBGAFCF_02081	1.74e-166	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
PIBGAFCF_02082	9.77e-125	resA	-	-	CO	-	-	-	Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c
PIBGAFCF_02083	0.0	resB	-	-	O	ko:K07399	-	ko00000	COG1333 ResB protein required for cytochrome c biosynthesis
PIBGAFCF_02084	3.09e-252	resC	-	-	O	-	-	-	'COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component'
PIBGAFCF_02085	9.77e-171	resD	-	-	T	ko:K07775	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PIBGAFCF_02086	0.0	resE	2.7.13.3	-	T	ko:K07651	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PIBGAFCF_02087	3.09e-133	sigX	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PIBGAFCF_02088	6.63e-216	rsiX	-	-	-	-	-	-	-
PIBGAFCF_02089	0.0	serA	1.1.1.399, 1.1.1.95	-	E	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PIBGAFCF_02090	3.59e-121	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PIBGAFCF_02091	5.88e-55	fer	-	-	C	ko:K05337	-	ko00000	Ferredoxin
PIBGAFCF_02092	2.97e-244	ypbB	5.1.3.1	-	S	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	protein conserved in bacteria
PIBGAFCF_02093	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	DNA helicase
PIBGAFCF_02094	2.24e-124	ypbD	-	-	S	ko:K07052	-	ko00000	metal-dependent membrane protease
PIBGAFCF_02095	8.85e-110	ypbE	-	-	M	-	-	-	Lysin motif
PIBGAFCF_02096	3.73e-109	ypbF	-	-	S	-	-	-	Protein of unknown function (DUF2663)
PIBGAFCF_02097	5.62e-181	ypbG	-	-	S	ko:K07098	-	ko00000	Calcineurin-like phosphoesterase superfamily domain
PIBGAFCF_02098	7.9e-136	mecB	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC
PIBGAFCF_02099	8.6e-310	gudB	1.4.1.2	-	E	ko:K00260	ko00220,ko00250,ko00430,ko00910,ko01100,map00220,map00250,map00430,map00910,map01100	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
PIBGAFCF_02100	5.93e-236	ypdA	1.8.1.9	-	O	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	COG0492 Thioredoxin reductase
PIBGAFCF_02101	2.61e-155	prsW	-	-	S	-	-	-	Involved in the degradation of specific anti-sigma factors
PIBGAFCF_02102	2.15e-203	sleB	3.5.1.28	-	M	ko:K01449	-	ko00000,ko01000	Spore cortex-lytic enzyme
PIBGAFCF_02103	1.1e-311	ypeB	-	-	H	ko:K06313	-	ko00000	sporulation protein
PIBGAFCF_02104	6.58e-72	ypfA	-	-	M	-	-	-	Flagellar protein YcgR
PIBGAFCF_02105	6.47e-17	-	-	-	S	-	-	-	Family of unknown function (DUF5359)
PIBGAFCF_02106	3.75e-142	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
PIBGAFCF_02107	3.17e-261	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
PIBGAFCF_02108	4.76e-228	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PIBGAFCF_02109	1.32e-12	-	-	-	S	-	-	-	YpzI-like protein
PIBGAFCF_02110	1.29e-128	yphA	-	-	-	-	-	-	-
PIBGAFCF_02111	2.86e-316	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
PIBGAFCF_02112	3.72e-239	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
PIBGAFCF_02113	1.13e-23	yphE	-	-	S	-	-	-	Protein of unknown function (DUF2768)
PIBGAFCF_02114	2.47e-166	yphF	-	-	-	-	-	-	-
PIBGAFCF_02116	0.0	spoIVA	-	-	S	ko:K06398	-	ko00000	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
PIBGAFCF_02117	1.07e-57	hbs	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PIBGAFCF_02118	6.27e-131	folE	3.5.4.16	-	H	ko:K01495	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	GTP cyclohydrolase
PIBGAFCF_02119	6.23e-47	mtrB	-	-	K	ko:K06285	-	ko00000,ko03000	Required for transcription attenuation control in the Trp operon. This trans-acting factor seems to recognize a 10 bases nucleotide sequence in the Trp leader transcript causing transcription termination. Binds the leader RNA only in presence of L-tryptophan
PIBGAFCF_02120	2.68e-175	hepS	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1
PIBGAFCF_02121	2.6e-167	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PIBGAFCF_02122	5.39e-250	hepT	2.5.1.30, 2.5.1.83	-	H	ko:K00805,ko:K21275	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
PIBGAFCF_02123	2.01e-102	ndk	2.7.4.6	-	F	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	ko00000,ko00001,ko00002,ko01000,ko04131	Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
PIBGAFCF_02124	2.01e-33	cheR	2.1.1.80	-	NT	ko:K00575	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko01000,ko02035	COG1352 Methylase of chemotaxis methyl-accepting proteins
PIBGAFCF_02125	4.44e-131	cheR	2.1.1.80	-	NT	ko:K00575	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko01000,ko02035	COG1352 Methylase of chemotaxis methyl-accepting proteins
PIBGAFCF_02126	3.26e-274	aroC	4.2.3.5	-	E	ko:K01736	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PIBGAFCF_02127	1.14e-253	aroB	4.2.3.4	-	E	ko:K01735	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PIBGAFCF_02128	8.09e-77	aroH	5.4.99.5	-	E	ko:K06208	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis
PIBGAFCF_02129	0.0	trpE	4.1.3.27	-	EH	ko:K01657	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PIBGAFCF_02130	3.8e-201	trpD	2.4.2.18, 4.1.3.27	-	E	ko:K00766,ko:K13497	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PIBGAFCF_02131	1.15e-158	trpC	4.1.1.48, 5.3.1.24	-	E	ko:K01609,ko:K13498	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TrpC family
PIBGAFCF_02132	2.57e-141	trpF	5.3.1.24	-	E	ko:K01817	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TrpF family
PIBGAFCF_02133	9.2e-286	trpB	4.2.1.20	-	E	ko:K01696	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PIBGAFCF_02134	1.08e-175	trpA	4.2.1.20	-	E	ko:K01695	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PIBGAFCF_02135	2.67e-251	hisC	2.6.1.9	-	E	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PIBGAFCF_02136	9.38e-256	tyrA	1.3.1.12	-	E	ko:K04517	ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	prephenate dehydrogenase
PIBGAFCF_02137	3.79e-290	aroA	2.5.1.19	-	E	ko:K00800	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PIBGAFCF_02138	7.68e-292	ypiA	-	-	S	-	-	-	COG0457 FOG TPR repeat
PIBGAFCF_02139	2.14e-128	ypiB	-	-	S	-	-	-	Belongs to the UPF0302 family
PIBGAFCF_02140	1.21e-94	ypiF	-	-	S	-	-	-	Protein of unknown function (DUF2487)
PIBGAFCF_02141	2.27e-124	qcrA	-	-	C	ko:K03886	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Menaquinol-cytochrome c reductase
PIBGAFCF_02142	8.76e-166	qcrB	-	-	C	ko:K03887	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002	COG1290 Cytochrome b subunit of the bc complex
PIBGAFCF_02143	9.48e-190	qcrC	-	-	C	ko:K03888	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002	Menaquinol-cytochrome c reductase cytochrome b c subunit
PIBGAFCF_02144	6.12e-126	ypjA	-	-	S	-	-	-	membrane
PIBGAFCF_02145	1.09e-177	ypjB	-	-	S	-	-	-	sporulation protein
PIBGAFCF_02146	5.93e-282	-	4.1.1.2	-	G	ko:K01569	ko00630,ko01100,map00630,map01100	ko00000,ko00001,ko01000	Oxalate decarboxylase
PIBGAFCF_02147	6.13e-199	ypjC	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2179)
PIBGAFCF_02148	2.47e-74	ypjD	-	-	S	-	-	-	Nucleotide pyrophosphohydrolase
PIBGAFCF_02149	9.38e-187	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PIBGAFCF_02150	3.58e-93	mgsA	4.2.3.3	-	G	ko:K01734	ko00640,ko01120,map00640,map01120	ko00000,ko00001,ko01000	methylglyoxal synthase
PIBGAFCF_02151	3.8e-162	bshB1	-	-	S	ko:K01463	-	ko00000,ko01000	proteins, LmbE homologs
PIBGAFCF_02152	2.45e-267	bshA	-	GT4	M	ko:K00754	-	ko00000,ko01000	N-acetyl-alpha-D-glucosaminyl L-malate synthase
PIBGAFCF_02153	1.53e-266	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PIBGAFCF_02154	2.04e-226	birA	6.3.4.15	-	K	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PIBGAFCF_02155	1.89e-191	panB	2.1.2.11	-	H	ko:K00606	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate
PIBGAFCF_02156	1.38e-193	panC	6.3.2.1	-	H	ko:K01918	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
PIBGAFCF_02157	1.98e-83	panD	4.1.1.11	-	H	ko:K01579	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
PIBGAFCF_02158	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
PIBGAFCF_02159	1.52e-32	ypmA	-	-	S	-	-	-	Protein of unknown function (DUF4264)
PIBGAFCF_02160	2.74e-95	ypmB	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_02161	1.1e-278	aspB	2.6.1.1, 2.6.1.14	-	E	ko:K00812,ko:K22457	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase
PIBGAFCF_02162	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	asparaginyl-tRNA
PIBGAFCF_02163	8.05e-166	dnaD	-	-	L	ko:K02086	-	ko00000	DNA replication protein DnaD
PIBGAFCF_02164	1.63e-154	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PIBGAFCF_02165	4.6e-113	ypoC	-	-	-	-	-	-	-
PIBGAFCF_02166	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
PIBGAFCF_02167	8.49e-144	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PIBGAFCF_02168	1.05e-225	yppC	-	-	S	-	-	-	Protein of unknown function (DUF2515)
PIBGAFCF_02173	5.58e-60	yppG	-	-	S	-	-	-	YppG-like protein
PIBGAFCF_02174	1.56e-78	hspX	-	-	O	ko:K06335,ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
PIBGAFCF_02175	6.99e-115	ypqE	-	-	G	ko:K02777	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	COG2190 Phosphotransferase system IIA components
PIBGAFCF_02176	0.0	yprA	-	-	L	ko:K06877	-	ko00000	COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster
PIBGAFCF_02177	9.55e-285	yprB	-	-	L	ko:K07502	-	ko00000	RNase_H superfamily
PIBGAFCF_02179	8.12e-36	cotD	-	-	S	ko:K06327	-	ko00000	Inner spore coat protein D
PIBGAFCF_02180	3.67e-126	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
PIBGAFCF_02181	5.52e-61	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PIBGAFCF_02182	3.07e-276	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
PIBGAFCF_02183	8.55e-77	yqgA	-	-	-	-	-	-	-
PIBGAFCF_02184	6.91e-31	-	-	-	S	-	-	-	YpzG-like protein
PIBGAFCF_02186	0.0	ypvA	3.6.4.12	-	KL	ko:K03722	-	ko00000,ko01000,ko03400	COG1199 Rad3-related DNA helicases
PIBGAFCF_02187	1.95e-186	ypwA	3.4.17.19	-	E	ko:K01299	-	ko00000,ko01000,ko01002	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
PIBGAFCF_02188	1.46e-159	ypwA	3.4.17.19	-	E	ko:K01299	-	ko00000,ko01000,ko01002	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
PIBGAFCF_02189	8.76e-124	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PIBGAFCF_02190	4.64e-294	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine
PIBGAFCF_02191	2.2e-09	-	-	-	S	-	-	-	Bacillus cereus group antimicrobial protein
PIBGAFCF_02192	8.02e-60	MGMT	-	-	L	ko:K07443	-	ko00000	6-O-methylguanine DNA methyltransferase, DNA binding domain
PIBGAFCF_02193	2.22e-130	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PIBGAFCF_02194	3.81e-254	bcsA	-	-	Q	ko:K16167	-	ko00000,ko01008	Naringenin-chalcone synthase
PIBGAFCF_02195	2.25e-111	ypbQ	-	-	S	ko:K16168	-	ko00000,ko01008	protein conserved in bacteria
PIBGAFCF_02196	0.0	ypbR	-	-	S	-	-	-	Dynamin family
PIBGAFCF_02197	3e-45	ypbS	-	-	S	-	-	-	Protein of unknown function (DUF2533)
PIBGAFCF_02198	5.97e-11	-	-	-	-	-	-	-	-
PIBGAFCF_02199	2.07e-204	ypcP	-	-	L	-	-	-	5'3' exonuclease
PIBGAFCF_02201	3.51e-88	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Ribonuclease
PIBGAFCF_02202	3.96e-154	ypdP	-	-	S	ko:K09125	-	ko00000	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
PIBGAFCF_02203	4.29e-152	ypeP	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	COG0328 Ribonuclease HI
PIBGAFCF_02204	6.37e-38	ypeQ	-	-	S	-	-	-	Zinc-finger
PIBGAFCF_02205	5.37e-48	-	-	-	S	-	-	-	Protein of unknown function (DUF2564)
PIBGAFCF_02206	4.27e-16	degR	-	-	-	-	-	-	-
PIBGAFCF_02207	5.12e-42	cspD	-	-	K	ko:K03704	-	ko00000,ko03000	Cold-shock protein
PIBGAFCF_02208	2.89e-272	ugtP	2.4.1.315	GT28	M	ko:K03429	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Processive glucosyltransferase involved in the biosynthesis of both the bilayer- and non-bilayer-forming membrane glucolipids. Is able to successively transfer up to three glucosyl residues to diacylglycerol (DAG), thereby catalyzing the formation of beta-monoglucosyl-DAG (3-O-(beta-D-glucopyranosyl)-1,2-diacyl- sn-glycerol), beta-diglucosyl-DAG (3-O-(beta-D-glucopyranosyl- beta-(1- 6)-D-glucopyranosyl)-1,2-diacyl-sn-glycerol) and beta- triglucosyl-DAG (3-O-(beta-D-glucopyranosyl-beta-(1- 6)-D- glucopyranosyl-beta-(1- 6)-D-glucopyranosyl)-1,2-diacyl-sn- glycerol). Beta-diglucosyl-DAG is the predominant glycolipid found in Bacillales and is also used as a membrane anchor for lipoteichoic acid (LTA)
PIBGAFCF_02209	1.56e-225	metAA	2.3.1.46	-	E	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PIBGAFCF_02211	4.95e-107	bsaA	1.11.1.9	-	O	ko:K00432	ko00480,ko00590,ko04918,map00480,map00590,map04918	ko00000,ko00001,ko01000	Belongs to the glutathione peroxidase family
PIBGAFCF_02212	1.69e-116	yagB	-	-	S	ko:K06950	-	ko00000	phosphohydrolase
PIBGAFCF_02213	8.12e-197	ypgR	-	-	C	-	-	-	COG0694 Thioredoxin-like proteins and domains
PIBGAFCF_02214	0.0	ilvD	4.2.1.9	-	E	ko:K01687,ko:K16786	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,ko02010,map00290,map00770,map01100,map01110,map01130,map01210,map01230,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Belongs to the IlvD Edd family
PIBGAFCF_02215	1.38e-98	yphP	-	-	S	-	-	-	Belongs to the UPF0403 family
PIBGAFCF_02216	2.63e-167	ypiP	-	-	AJ	-	-	-	Putative SAM-dependent methyltransferase
PIBGAFCF_02217	1.41e-142	ypjP	-	-	S	-	-	-	YpjP-like protein
PIBGAFCF_02218	2.08e-202	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PIBGAFCF_02219	6.3e-110	dfrA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PIBGAFCF_02220	9.83e-141	ypkP	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
PIBGAFCF_02221	7.14e-141	yplQ	-	-	S	ko:K11068	-	ko00000,ko02042	protein, Hemolysin III
PIBGAFCF_02222	1.54e-207	yplP	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_02223	7.88e-305	ilvA	4.3.1.19	-	E	ko:K01754	ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
PIBGAFCF_02224	3.66e-54	ypmP	-	-	S	-	-	-	Protein of unknown function (DUF2535)
PIBGAFCF_02225	2.24e-131	ypmQ	-	-	S	ko:K07152	-	ko00000,ko03029	protein SCO1 SenC PrrC, involved in biogenesis of respiratory and photosynthetic systems
PIBGAFCF_02226	3.62e-167	ypmR	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
PIBGAFCF_02227	2.45e-122	ypmS	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_02228	1.42e-88	ypoP	-	-	K	-	-	-	transcriptional
PIBGAFCF_02229	1.34e-130	msrB	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PIBGAFCF_02230	2.47e-101	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
PIBGAFCF_02231	4.5e-155	-	-	-	GM	ko:K19421	-	ko00000	Polysaccharide biosynthesis protein
PIBGAFCF_02232	9.6e-268	phy	3.1.3.8	-	I	ko:K01083	ko00562,map00562	ko00000,ko00001,ko01000	Myo-inositol-hexaphosphate 3-phosphohydrolase
PIBGAFCF_02233	6.45e-215	cgeB	-	-	S	ko:K06320	-	ko00000	Spore maturation protein
PIBGAFCF_02234	1.08e-81	cgeA	-	-	-	ko:K06319	-	ko00000	-
PIBGAFCF_02235	2.84e-54	cgeC	-	-	-	ko:K06321	-	ko00000	-
PIBGAFCF_02236	1.17e-286	cgeD	-	-	M	ko:K06322	-	ko00000	maturation of the outermost layer of the spore
PIBGAFCF_02237	1.13e-175	yiiD	-	-	K	ko:K06323	-	ko00000	acetyltransferase
PIBGAFCF_02239	3.54e-83	-	-	-	L	-	-	-	Bacterial transcription activator, effector binding domain
PIBGAFCF_02241	2.4e-296	yodT	-	-	H	-	-	-	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PIBGAFCF_02242	5.2e-156	atoD	2.8.3.8, 2.8.3.9	-	I	ko:K01034	ko00310,ko00627,ko00640,ko00650,ko01100,ko01120,ko02020,map00310,map00627,map00640,map00650,map01100,map01120,map02020	ko00000,ko00001,ko01000	COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
PIBGAFCF_02243	3.36e-153	atoA	2.8.3.8, 2.8.3.9	-	I	ko:K01035	ko00310,ko00627,ko00640,ko00650,ko01100,ko01120,ko02020,map00310,map00627,map00640,map00650,map01100,map01120,map02020	ko00000,ko00001,ko01000	COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit
PIBGAFCF_02244	4.03e-315	yodQ	3.5.1.16, 3.5.1.18	-	E	ko:K01438,ko:K01439	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Acetylornithine deacetylase
PIBGAFCF_02245	4.82e-180	yodP	2.3.1.264	-	K	ko:K21935	-	ko00000,ko01000	Acetyltransferase (GNAT) family
PIBGAFCF_02246	0.0	kamA	5.4.3.2	-	E	ko:K01843	ko00310,map00310	ko00000,ko00001,ko01000	lysine 2,3-aminomutase
PIBGAFCF_02247	6.45e-59	yokU	-	-	S	-	-	-	YokU-like protein, putative antitoxin
PIBGAFCF_02248	2.87e-47	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
PIBGAFCF_02249	1.39e-66	-	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PIBGAFCF_02250	1.18e-155	yodN	-	-	-	-	-	-	-
PIBGAFCF_02252	1.97e-33	yozD	-	-	S	-	-	-	YozD-like protein
PIBGAFCF_02253	8.36e-131	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
PIBGAFCF_02254	1.16e-72	yodL	-	-	S	-	-	-	YodL-like
PIBGAFCF_02256	4.29e-161	deoD	2.4.2.1	-	F	ko:K03784	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Purine nucleoside phosphorylase
PIBGAFCF_02257	8.69e-190	yodJ	3.4.17.14	-	M	ko:K07260	ko00550,ko01100,ko01502,ko02020,map00550,map01100,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	D-alanyl-D-alanine carboxypeptidase
PIBGAFCF_02258	2.3e-30	yodI	-	-	-	-	-	-	-
PIBGAFCF_02259	1.43e-155	yodH	-	-	Q	-	-	-	Methyltransferase
PIBGAFCF_02260	0.0	ctpA	3.4.21.102	-	M	ko:K03797	-	ko00000,ko01000,ko01002	Belongs to the peptidase S41A family
PIBGAFCF_02261	3.79e-164	yydK	-	-	K	ko:K03489	-	ko00000,ko03000	Transcriptional regulator
PIBGAFCF_02262	3.26e-270	bglA	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PIBGAFCF_02263	1.12e-33	bglA	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PIBGAFCF_02264	0.0	-	3.2.1.45	GH30	M	ko:K01201	ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142	ko00000,ko00001,ko01000	Glycosyl hydrolase family 30 beta sandwich domain
PIBGAFCF_02265	0.0	yodF	-	-	E	ko:K03307	-	ko00000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PIBGAFCF_02266	1.14e-27	-	-	-	S	-	-	-	Protein of unknown function (DUF3311)
PIBGAFCF_02267	1.82e-108	yodE	-	-	E	ko:K15975	-	ko00000	COG0346 Lactoylglutathione lyase and related lyases
PIBGAFCF_02268	8.05e-58	yodE	-	-	E	ko:K15975	-	ko00000	COG0346 Lactoylglutathione lyase and related lyases
PIBGAFCF_02269	1.35e-137	yahD	-	-	S	ko:K06999	-	ko00000	Carboxylesterase
PIBGAFCF_02270	6.14e-135	yodC	-	-	C	-	-	-	nitroreductase
PIBGAFCF_02271	1.93e-69	yodB	-	-	K	-	-	-	transcriptional
PIBGAFCF_02272	9.37e-83	iolK	-	-	S	-	-	-	tautomerase
PIBGAFCF_02274	1.83e-101	yozR	-	-	S	-	-	-	COG0071 Molecular chaperone (small heat shock protein)
PIBGAFCF_02275	3.04e-203	rarD	-	-	S	ko:K05786	-	ko00000,ko02000	-transporter
PIBGAFCF_02276	3.66e-31	-	-	-	-	-	-	-	-
PIBGAFCF_02277	4.69e-79	yojF	-	-	S	-	-	-	Protein of unknown function (DUF1806)
PIBGAFCF_02278	2.61e-161	yojG	-	-	S	ko:K22135	-	ko00000,ko01000	deacetylase
PIBGAFCF_02279	6.24e-187	-	-	-	T	ko:K17763	-	ko00000,ko03021	COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PIBGAFCF_02280	3.54e-296	norM	-	-	V	ko:K03327	-	ko00000,ko02000	Multidrug efflux pump
PIBGAFCF_02281	3.97e-136	dacB	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PIBGAFCF_02282	6.89e-278	-	-	-	CG	-	-	-	UDP-glucoronosyl and UDP-glucosyl transferase
PIBGAFCF_02283	1.26e-199	-	-	CBM50	M	ko:K19220,ko:K19223,ko:K19224	-	ko00000,ko01000,ko01002,ko01011	COG1388 FOG LysM repeat
PIBGAFCF_02284	1.31e-135	sodC	1.15.1.1	-	P	ko:K04565	ko04146,ko04213,ko05014,ko05016,ko05020,map04146,map04213,map05014,map05016,map05020	ko00000,ko00001,ko01000	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
PIBGAFCF_02285	2e-207	yojN	-	-	S	ko:K04748	-	ko00000	ATPase family associated with various cellular activities (AAA)
PIBGAFCF_02286	0.0	yojO	-	-	P	-	-	-	Von Willebrand factor
PIBGAFCF_02287	0.0	odhA	1.2.4.2	-	C	ko:K00164	ko00020,ko00310,ko00380,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map00380,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components 2- oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3)
PIBGAFCF_02288	1.12e-257	odhB	2.3.1.61	-	C	ko:K00658	ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2)
PIBGAFCF_02289	4.3e-56	-	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
PIBGAFCF_02290	3.33e-86	-	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
PIBGAFCF_02291	3.02e-209	yocS	-	-	S	ko:K03453	-	ko00000	-transporter
PIBGAFCF_02292	2.2e-293	yocR	-	-	S	ko:K03308	-	ko00000	Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
PIBGAFCF_02293	5.12e-207	sodF	1.15.1.1	-	P	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	ko00000,ko00001,ko01000	Superoxide dismutase
PIBGAFCF_02294	0.0	sqhC	4.2.1.137	-	I	ko:K18115	-	ko00000,ko01000	COG1657 Squalene cyclase
PIBGAFCF_02295	0.0	dhaS	1.2.1.3, 1.2.1.39	-	C	ko:K00128,ko:K00146	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00360,ko00380,ko00410,ko00561,ko00620,ko00625,ko00643,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00360,map00380,map00410,map00561,map00620,map00625,map00643,map00903,map00981,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
PIBGAFCF_02296	4.69e-43	yozC	-	-	-	-	-	-	-
PIBGAFCF_02298	5.32e-75	yozO	-	-	S	-	-	-	Bacterial PH domain
PIBGAFCF_02299	1.83e-49	yocN	-	-	-	-	-	-	-
PIBGAFCF_02300	8.77e-41	yozN	-	-	-	-	-	-	-
PIBGAFCF_02301	2.21e-114	yocM	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
PIBGAFCF_02302	1.16e-11	yocN	-	-	-	-	-	-	-
PIBGAFCF_02304	7.44e-78	yocK	-	-	T	-	-	-	general stress protein
PIBGAFCF_02305	2.71e-143	azoR	-	-	I	ko:K01118	-	ko00000,ko01000	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PIBGAFCF_02307	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	DNA helicase
PIBGAFCF_02308	6.61e-157	yocH	-	-	M	-	-	-	COG1388 FOG LysM repeat
PIBGAFCF_02310	8.07e-233	yocD	3.4.17.13	-	V	ko:K01297	-	ko00000,ko01000,ko01002,ko01011	peptidase S66
PIBGAFCF_02311	3.49e-118	yocC	-	-	-	-	-	-	-
PIBGAFCF_02312	9.94e-172	-	-	-	J	-	-	-	Protein required for attachment to host cells
PIBGAFCF_02313	5.42e-117	yozB	-	-	S	ko:K08976	-	ko00000	membrane
PIBGAFCF_02314	5.45e-154	yocA	-	-	M	-	-	-	COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
PIBGAFCF_02315	3.14e-72	czrA	-	-	K	ko:K22043	-	ko00000,ko03000	transcriptional
PIBGAFCF_02316	1.29e-117	yobW	-	-	-	-	-	-	-
PIBGAFCF_02317	1.22e-159	yobT	-	-	S	-	-	-	COG0491 Zn-dependent hydrolases, including glyoxylases
PIBGAFCF_02318	1.44e-110	yobS	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_02319	6.26e-156	yobQ	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
PIBGAFCF_02320	2.04e-68	csaA	-	-	J	ko:K06878	-	ko00000	tRNA-binding protein
PIBGAFCF_02323	1.52e-38	-	-	-	-	-	-	-	-
PIBGAFCF_02324	6.83e-121	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PIBGAFCF_02326	6.3e-36	yoaF	-	-	-	-	-	-	-
PIBGAFCF_02327	0.0	yoaE	-	-	C	-	-	-	belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PIBGAFCF_02328	2.4e-237	yoaD	1.1.1.399, 1.1.1.95	-	EH	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PIBGAFCF_02329	0.0	lsrK	2.7.1.189	-	G	ko:K11216	ko02024,map02024	ko00000,ko00001,ko01000	FGGY family of carbohydrate kinases, C-terminal domain
PIBGAFCF_02330	2.14e-100	ctsR	-	-	K	ko:K03708	-	ko00000,ko03000	Belongs to the CtsR family
PIBGAFCF_02331	8.58e-79	mcsA	-	-	S	ko:K19411	-	ko00000	protein with conserved CXXC pairs
PIBGAFCF_02332	3.84e-257	mcsB	2.7.14.1	-	E	ko:K19405	-	ko00000,ko01000	Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity
PIBGAFCF_02333	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Belongs to the ClpA ClpB family
PIBGAFCF_02334	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PIBGAFCF_02335	1.22e-247	disA	2.7.7.85	-	L	ko:K07067	-	ko00000,ko01000	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
PIBGAFCF_02336	1.85e-245	yacL	-	-	S	-	-	-	COG4956 Integral membrane protein (PIN domain superfamily)
PIBGAFCF_02337	1.96e-157	ispD	2.7.7.60	-	I	ko:K00991	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
PIBGAFCF_02338	1.23e-110	ispF	2.7.7.60, 4.6.1.12	-	I	ko:K01770,ko:K12506	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
PIBGAFCF_02339	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PIBGAFCF_02340	1.91e-152	cysE	2.3.1.30	-	E	ko:K00640	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	ko00000,ko00001,ko00002,ko01000	Serine acetyltransferase
PIBGAFCF_02341	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
PIBGAFCF_02342	9.32e-92	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PIBGAFCF_02343	9.69e-171	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PIBGAFCF_02344	1.92e-113	yacP	-	-	S	ko:K06962	-	ko00000	RNA-binding protein containing a PIN domain
PIBGAFCF_02345	4.65e-149	sigH	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	Belongs to the sigma-70 factor family
PIBGAFCF_02346	3.77e-32	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PIBGAFCF_02347	6.9e-124	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
PIBGAFCF_02348	3.4e-93	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PIBGAFCF_02349	2.04e-159	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PIBGAFCF_02350	6.68e-103	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PIBGAFCF_02351	2.84e-64	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PIBGAFCF_02352	4.2e-139	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
PIBGAFCF_02353	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PIBGAFCF_02354	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PIBGAFCF_02355	9.87e-45	rplGB	-	-	J	ko:K07590	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the eukaryotic ribosomal protein eL8 family
PIBGAFCF_02356	9.47e-94	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PIBGAFCF_02357	4.85e-107	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PIBGAFCF_02358	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PIBGAFCF_02359	9.55e-286	tuf	-	-	J	ko:K02358	-	ko00000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PIBGAFCF_02360	3.62e-220	ybaC	-	-	S	-	-	-	Alpha/beta hydrolase family
PIBGAFCF_02361	2.58e-65	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
PIBGAFCF_02362	1.02e-143	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PIBGAFCF_02363	3.68e-136	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
PIBGAFCF_02364	3.27e-58	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PIBGAFCF_02365	9.5e-201	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PIBGAFCF_02366	2.83e-62	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PIBGAFCF_02367	9.23e-71	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PIBGAFCF_02368	1.69e-151	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PIBGAFCF_02369	1.38e-98	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PIBGAFCF_02370	1.88e-35	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
PIBGAFCF_02371	1.92e-51	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PIBGAFCF_02372	1.04e-78	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PIBGAFCF_02373	1.43e-67	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PIBGAFCF_02374	2.58e-120	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PIBGAFCF_02375	1.43e-39	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PIBGAFCF_02376	1.08e-87	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PIBGAFCF_02377	1.05e-119	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PIBGAFCF_02378	2.38e-74	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PIBGAFCF_02379	4.54e-111	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PIBGAFCF_02380	1.59e-33	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
PIBGAFCF_02381	2.1e-94	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	binds to the 23S rRNA
PIBGAFCF_02382	1.82e-294	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PIBGAFCF_02383	2.51e-157	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PIBGAFCF_02384	3.16e-180	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine aminopeptidase
PIBGAFCF_02385	2.92e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PIBGAFCF_02386	2.45e-19	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
PIBGAFCF_02387	1.54e-75	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PIBGAFCF_02388	2.67e-83	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PIBGAFCF_02389	4.94e-217	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PIBGAFCF_02390	4.27e-77	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
PIBGAFCF_02391	6.9e-196	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PIBGAFCF_02392	1.06e-184	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PIBGAFCF_02393	8.86e-175	ecfT	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PIBGAFCF_02394	3.42e-179	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PIBGAFCF_02395	3.79e-101	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PIBGAFCF_02396	1.49e-84	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
PIBGAFCF_02397	4.46e-179	ybaJ	-	-	Q	-	-	-	Methyltransferase domain
PIBGAFCF_02399	2.28e-99	ybaK	-	-	S	-	-	-	Protein of unknown function (DUF2521)
PIBGAFCF_02400	4.3e-168	cwlD	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	n-acetylmuramoyl-L-alanine amidase
PIBGAFCF_02401	4.58e-247	mrp	-	-	D	ko:K03593	-	ko00000,ko03029,ko03036	Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
PIBGAFCF_02402	1.95e-102	gerD	-	-	-	ko:K06294	-	ko00000	-
PIBGAFCF_02403	1.25e-134	kbaA	-	-	S	ko:K06349	-	ko00000	Involved in the activation of the KinB signaling pathway of sporulation
PIBGAFCF_02404	4.44e-174	pdaB	-	-	G	-	-	-	Polysaccharide deacetylase
PIBGAFCF_02427	5.18e-93	ytaB	-	-	T	ko:K05770	ko04080,ko04214,ko04979,ko05166,map04080,map04214,map04979,map05166	ko00000,ko00001,ko02000	membrane
PIBGAFCF_02428	8.57e-160	yteA	-	-	T	-	-	-	COG1734 DnaK suppressor protein
PIBGAFCF_02429	0.0	menF	5.4.4.2	-	HQ	ko:K02552	ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Isochorismate synthase
PIBGAFCF_02430	0.0	menD	2.2.1.9	-	H	ko:K02551	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
PIBGAFCF_02431	2.39e-188	menH	4.2.99.20	-	S	ko:K08680	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC)
PIBGAFCF_02432	7.22e-198	menB	4.1.3.36	-	H	ko:K01661	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PIBGAFCF_02433	0.0	menE	6.2.1.26	-	H	ko:K01911	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
PIBGAFCF_02434	4.21e-265	menC	4.2.1.113	-	H	ko:K02549	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB)
PIBGAFCF_02435	3.88e-34	-	-	-	S	-	-	-	Domain of Unknown Function (DUF1540)
PIBGAFCF_02436	9.63e-230	ythB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	COG1294 Cytochrome bd-type quinol oxidase, subunit 2
PIBGAFCF_02437	6.36e-313	ythA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	oxidase, subunit
PIBGAFCF_02438	1.89e-53	rpmE2	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
PIBGAFCF_02439	4.26e-133	ytiB	4.2.1.1	-	P	ko:K01673	ko00910,map00910	ko00000,ko00001,ko01000	Reversible hydration of carbon dioxide
PIBGAFCF_02440	5.71e-52	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
PIBGAFCF_02441	5.89e-113	luxS	4.4.1.21	-	T	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PIBGAFCF_02442	1.66e-96	ytkA	-	-	S	-	-	-	YtkA-like
PIBGAFCF_02444	3e-98	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
PIBGAFCF_02445	1.67e-77	ytkC	-	-	S	-	-	-	Bacteriophage holin family
PIBGAFCF_02446	5.86e-114	ytkD	3.6.1.55	-	L	ko:K03574	-	ko00000,ko01000,ko03400	Belongs to the Nudix hydrolase family
PIBGAFCF_02447	3.42e-170	ytlD	-	-	P	ko:K02050	-	ko00000,ko00002,ko02000	COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component
PIBGAFCF_02448	1.38e-180	ytlC	3.6.3.36	-	P	ko:K02049,ko:K10831,ko:K15555	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
PIBGAFCF_02449	6.07e-228	ytlA	-	-	P	ko:K02051	-	ko00000,ko00002,ko02000	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components
PIBGAFCF_02450	6.15e-187	ytmA	-	-	E	-	-	-	COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases
PIBGAFCF_02451	1.65e-51	ytmB	-	-	S	-	-	-	Protein of unknown function (DUF2584)
PIBGAFCF_02452	0.0	pckA	4.1.1.49	-	C	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
PIBGAFCF_02453	7.88e-287	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PIBGAFCF_02454	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
PIBGAFCF_02455	0.0	ytnA	-	-	E	ko:K03293	-	ko00000	COG1113 Gamma-aminobutyrate permease and related permeases
PIBGAFCF_02456	7.46e-80	ytoA	-	-	S	-	-	-	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
PIBGAFCF_02457	6.67e-192	ytpA	3.1.1.5	-	I	ko:K01048	ko00564,map00564	ko00000,ko00001,ko01000	Alpha beta hydrolase
PIBGAFCF_02458	2.17e-266	ytpB	4.2.3.130	-	S	ko:K16188	-	ko00000,ko01000	Tetraprenyl-beta-curcumene synthase
PIBGAFCF_02460	4.07e-133	ytqB	-	-	J	-	-	-	Putative rRNA methylase
PIBGAFCF_02461	6.73e-244	ytqA	-	-	S	ko:K07139	-	ko00000	Fe-S oxidoreductase
PIBGAFCF_02462	2.89e-52	ytzC	-	-	S	-	-	-	Protein of unknown function (DUF2524)
PIBGAFCF_02464	6.32e-86	ytrA	-	-	K	ko:K07979	-	ko00000,ko03000	GntR family transcriptional regulator
PIBGAFCF_02465	6.13e-200	ytrB	-	-	P	ko:K16921	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PIBGAFCF_02466	2.23e-215	ytrC	-	-	S	ko:K16919	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-2 family transporter protein
PIBGAFCF_02467	2.63e-203	-	-	-	P	ko:K16919	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-2 family transporter protein
PIBGAFCF_02468	1.47e-190	-	-	-	-	ko:K16919	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	-
PIBGAFCF_02469	7.08e-160	ytrE	-	-	V	ko:K16920	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PIBGAFCF_02470	3.54e-258	ytrF	-	-	V	ko:K02004,ko:K16918	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0577 ABC-type antimicrobial peptide transport system, permease component
PIBGAFCF_02471	5.19e-157	graR	-	-	T	ko:K11630,ko:K19078	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01504,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PIBGAFCF_02472	2.32e-216	bceS	2.7.13.3	-	T	ko:K11629,ko:K19077	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko01504,ko02022	His Kinase A (phosphoacceptor) domain
PIBGAFCF_02473	7.67e-171	bceA	-	-	V	ko:K02003,ko:K11631,ko:K19079	ko01503,ko02010,ko02020,ko05150,map01503,map02010,map02020,map05150	ko00000,ko00001,ko00002,ko01504,ko02000	ABC transporter, ATP-binding protein
PIBGAFCF_02474	0.0	bceB	-	-	V	ko:K02004,ko:K11632,ko:K19080	ko01503,ko02010,ko02020,ko05150,map01503,map02010,map02020,map05150	ko00000,ko00001,ko00002,ko01504,ko02000	ABC transporter (permease)
PIBGAFCF_02475	4.62e-130	ywaF	-	-	S	-	-	-	Integral membrane protein
PIBGAFCF_02476	2.16e-265	yttB	-	-	EGP	-	-	-	Major facilitator superfamily
PIBGAFCF_02477	7.29e-172	pfyP	-	-	T	-	-	-	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PIBGAFCF_02478	7.19e-69	ytvB	-	-	S	-	-	-	Protein of unknown function (DUF4257)
PIBGAFCF_02479	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
PIBGAFCF_02480	8.6e-69	ytwF	-	-	P	-	-	-	Sulfurtransferase
PIBGAFCF_02481	6.31e-96	-	-	-	M	-	-	-	Acetyltransferase (GNAT) domain
PIBGAFCF_02482	2.49e-313	melA	3.2.1.22	-	G	ko:K07406	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	Family 4 glycosyl hydrolase
PIBGAFCF_02483	1.37e-182	amyC	-	-	P	ko:K10119	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter (permease)
PIBGAFCF_02484	6.99e-212	-	-	-	G	ko:K10118	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PIBGAFCF_02485	3.41e-296	msmE	-	-	G	ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
PIBGAFCF_02486	1.62e-231	msmR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
PIBGAFCF_02487	3.57e-35	yteV	-	-	S	-	-	-	Sporulation protein Cse60
PIBGAFCF_02488	0.0	opuD	-	-	M	ko:K05020	-	ko00000,ko02000	Belongs to the BCCT transporter (TC 2.A.15) family
PIBGAFCF_02489	2.31e-293	ytfP	-	-	S	ko:K07007	-	ko00000	HI0933-like protein
PIBGAFCF_02490	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PIBGAFCF_02491	4.25e-160	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
PIBGAFCF_02492	4.46e-46	ytzE	-	-	K	-	-	-	COG1349 Transcriptional regulators of sugar metabolism
PIBGAFCF_02493	1.92e-149	ythP	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
PIBGAFCF_02494	1.21e-251	ythQ	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	Bacterial ABC transporter protein EcsB
PIBGAFCF_02495	3.89e-286	pbuO	-	-	S	ko:K06901	-	ko00000,ko02000	permease
PIBGAFCF_02496	0.0	ytjP	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Dipeptidase
PIBGAFCF_02497	4.05e-214	ytkP	2.5.1.47	-	E	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
PIBGAFCF_02498	2.04e-128	ytlP	3.1.4.58	-	J	ko:K01975	-	ko00000,ko01000,ko03016	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
PIBGAFCF_02499	2.86e-198	ytlQ	-	-	-	-	-	-	-
PIBGAFCF_02500	1.86e-214	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
PIBGAFCF_02501	3.42e-198	ytmP	-	-	M	-	-	-	Phosphotransferase
PIBGAFCF_02502	4.54e-59	ytzH	-	-	S	-	-	-	YtzH-like protein
PIBGAFCF_02503	4.34e-158	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PIBGAFCF_02504	1.41e-204	ytnP	-	-	S	-	-	-	COG0491 Zn-dependent hydrolases, including glyoxylases
PIBGAFCF_02505	0.0	malS	1.1.1.38	-	C	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	ko00000,ko00001,ko01000	Malate dehydrogenase
PIBGAFCF_02506	9.96e-69	ytzB	-	-	S	-	-	-	small secreted protein
PIBGAFCF_02507	8.38e-258	pepA	3.4.11.7	-	G	ko:K01261,ko:K01269	-	ko00000,ko01000,ko01002	COG1363 Cellulase M and related proteins
PIBGAFCF_02508	5.33e-98	ytoQ	-	-	S	-	-	-	Nucleoside 2-deoxyribosyltransferase YtoQ
PIBGAFCF_02509	9.1e-75	ytpP	-	-	CO	-	-	-	Thioredoxin
PIBGAFCF_02510	1.1e-186	ytpQ	-	-	S	-	-	-	Belongs to the UPF0354 family
PIBGAFCF_02511	1.15e-136	ytpR	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PIBGAFCF_02512	0.0	sftA	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
PIBGAFCF_02513	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
PIBGAFCF_02514	2.16e-25	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PIBGAFCF_02515	1.83e-30	ytxH	-	-	S	-	-	-	COG4980 Gas vesicle protein
PIBGAFCF_02516	8.39e-58	ytxJ	-	-	O	-	-	-	Protein of unknown function (DUF2847)
PIBGAFCF_02517	1.8e-248	aroA	2.5.1.54, 5.4.99.5	-	E	ko:K03856,ko:K13853	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate
PIBGAFCF_02518	7.72e-231	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
PIBGAFCF_02519	2.47e-184	motP	-	-	N	ko:K02556	ko02020,ko02030,ko02040,map02020,map02030,map02040	ko00000,ko00001,ko02000,ko02035	flagellar motor
PIBGAFCF_02520	1.87e-127	ytxE	-	-	N	ko:K02557	ko02030,ko02040,map02030,map02040	ko00000,ko00001,ko02000,ko02035	Flagellar motor protein
PIBGAFCF_02521	1.4e-283	acuC	-	-	BQ	ko:K04768	-	ko00000	histone deacetylase
PIBGAFCF_02522	6.01e-134	acuB	-	-	S	ko:K04767	-	ko00000	Domain in cystathionine beta-synthase and other proteins.
PIBGAFCF_02523	3.32e-154	acuA	-	-	K	ko:K04766	-	ko00000,ko01000	Part of the acuABC operon, which is possibly involved in the breakdown of acetoin and butanediol. Acts as an acetyltransferase inactivating acetyl-CoA synthetase AcsA via acetylation at a Lys residue
PIBGAFCF_02524	0.0	acsA	6.2.1.1	-	I	ko:K01895	ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko01004	COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases
PIBGAFCF_02525	1.41e-302	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PIBGAFCF_02526	7.23e-63	azlD	-	-	S	-	-	-	Branched-chain amino acid transport protein (AzlD)
PIBGAFCF_02527	7.21e-154	ygaZ	-	-	E	-	-	-	AzlC protein
PIBGAFCF_02528	1.06e-188	-	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_02529	6.5e-189	-	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PIBGAFCF_02530	1.52e-161	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
PIBGAFCF_02532	0.000125	yfkM	3.5.1.124	-	S	ko:K05520	-	ko00000,ko01000,ko01002	protease
PIBGAFCF_02535	2.12e-273	hmp	1.14.12.17, 1.18.1.3	-	C	ko:K05916,ko:K15765	ko00623,ko00920,ko01100,ko01120,ko01220,ko05132,map00623,map00920,map01100,map01120,map01220,map05132	ko00000,ko00001,ko00002,ko01000	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
PIBGAFCF_02536	5.75e-141	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PIBGAFCF_02537	0.0	ytrP	-	-	T	-	-	-	COG2199 FOG GGDEF domain
PIBGAFCF_02538	2.38e-109	ytsP	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
PIBGAFCF_02539	2.22e-137	yttP	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_02540	3.79e-183	hisK	3.1.3.15	-	E	ko:K04486	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	COG1387 Histidinol phosphatase and related hydrolases of the PHP family
PIBGAFCF_02541	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PIBGAFCF_02542	4.41e-305	braB	-	-	E	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
PIBGAFCF_02543	3.99e-259	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Cysteine desulfurase
PIBGAFCF_02544	1.06e-280	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PIBGAFCF_02545	4.15e-42	sspB	-	-	S	ko:K06418,ko:K06419	-	ko00000	spore protein
PIBGAFCF_02546	0.0	ytcI	6.2.1.1	-	I	ko:K01895	ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko01004	COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases
PIBGAFCF_02547	0.0	ytcJ	-	-	S	-	-	-	amidohydrolase
PIBGAFCF_02548	1.23e-191	nadK2	2.7.1.23	-	G	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PIBGAFCF_02549	7.4e-93	sppA	-	-	OU	ko:K04773	-	ko00000,ko01000,ko01002	signal peptide peptidase SppA
PIBGAFCF_02550	2.17e-108	sppA	-	-	OU	ko:K04773	-	ko00000,ko01000,ko01002	signal peptide peptidase SppA
PIBGAFCF_02551	1.31e-103	yteJ	-	-	S	-	-	-	RDD family
PIBGAFCF_02552	3.61e-147	ytfI	-	-	S	-	-	-	Protein of unknown function (DUF2953)
PIBGAFCF_02553	1.37e-99	ytfJ	-	-	S	-	-	-	Sporulation protein YtfJ
PIBGAFCF_02554	1.12e-115	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PIBGAFCF_02555	4.08e-223	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	DNA methylase
PIBGAFCF_02556	2.6e-278	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PIBGAFCF_02557	1.64e-114	moaB	2.7.7.75	-	H	ko:K03638	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	May be involved in the biosynthesis of molybdopterin
PIBGAFCF_02558	8.67e-297	argG	6.3.4.5	-	E	ko:K01940	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the argininosuccinate synthase family. Type 1 subfamily
PIBGAFCF_02559	0.0	argH	4.3.2.1	-	E	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	argininosuccinate lyase
PIBGAFCF_02561	1.33e-180	ytkK	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PIBGAFCF_02562	2.31e-163	ytkL	-	-	S	-	-	-	Belongs to the UPF0173 family
PIBGAFCF_02563	3.87e-303	ytoI	-	-	K	-	-	-	transcriptional regulator containing CBS domains
PIBGAFCF_02564	3.44e-60	ytpI	-	-	S	-	-	-	YtpI-like protein
PIBGAFCF_02565	7.37e-223	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	COG0618 Exopolyphosphatase-related proteins
PIBGAFCF_02566	1.17e-30	-	-	-	-	-	-	-	-
PIBGAFCF_02567	3.08e-113	ytrI	-	-	-	-	-	-	-
PIBGAFCF_02568	1.12e-71	ytrH	-	-	S	-	-	-	Sporulation protein YtrH
PIBGAFCF_02569	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
PIBGAFCF_02570	1.92e-283	ytsJ	1.1.1.38	-	C	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	ko00000,ko00001,ko01000	Malate dehydrogenase
PIBGAFCF_02571	2.08e-206	accD	2.1.3.15, 6.4.1.2	-	I	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PIBGAFCF_02572	3.28e-232	accA	2.1.3.15, 6.4.1.2	-	I	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
PIBGAFCF_02573	1.33e-228	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PIBGAFCF_02574	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
PIBGAFCF_02575	1.34e-81	fxsA	-	-	S	ko:K07113	-	ko00000	COG3030 Protein affecting phage T7 exclusion by the F plasmid
PIBGAFCF_02576	8.18e-247	ytvI	-	-	S	-	-	-	sporulation integral membrane protein YtvI
PIBGAFCF_02577	1.14e-95	ytwI	-	-	S	-	-	-	membrane
PIBGAFCF_02578	8.21e-268	citZ	2.3.3.1	-	C	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Belongs to the citrate synthase family
PIBGAFCF_02579	1.54e-307	icd	1.1.1.42	-	C	ko:K00031	ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146	br01601,ko00000,ko00001,ko00002,ko01000	isocitrate
PIBGAFCF_02580	2.1e-217	mdh	1.1.1.27, 1.1.1.37	-	C	ko:K00016,ko:K00024	ko00010,ko00020,ko00270,ko00620,ko00630,ko00640,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04922,map00010,map00020,map00270,map00620,map00630,map00640,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200,map04922	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible oxidation of malate to oxaloacetate
PIBGAFCF_02581	2.29e-164	phoP	-	-	T	ko:K07658	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PIBGAFCF_02582	0.0	phoR	2.7.13.3	-	T	ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Signal transduction histidine kinase
PIBGAFCF_02583	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PIBGAFCF_02584	2.14e-197	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PIBGAFCF_02585	4.52e-135	ytaF	-	-	P	-	-	-	Probably functions as a manganese efflux pump
PIBGAFCF_02586	3.15e-123	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PIBGAFCF_02587	4.68e-198	ytbE	-	-	S	-	-	-	reductase
PIBGAFCF_02588	3.31e-251	ytbD	-	-	EGP	ko:K19577	-	ko00000,ko02000	-transporter
PIBGAFCF_02589	7.74e-86	ytcD	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_02590	4.24e-247	gapB	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PIBGAFCF_02591	1.82e-88	speH	4.1.1.50	-	E	ko:K01611	ko00270,ko00330,ko01100,map00270,map00330,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
PIBGAFCF_02592	5.95e-106	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PIBGAFCF_02593	0.0	dnaB	-	-	L	ko:K03346	-	ko00000,ko03032	Membrane attachment protein
PIBGAFCF_02594	2.64e-215	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
PIBGAFCF_02595	1.43e-136	ytxB	-	-	S	-	-	-	SNARE associated Golgi protein
PIBGAFCF_02596	6.12e-192	ytxC	-	-	S	-	-	-	YtxC-like family
PIBGAFCF_02597	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PIBGAFCF_02598	2.22e-188	ysaA	3.1.3.5, 3.8.1.2	-	S	ko:K01560,ko:K07025,ko:K08723	ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120	ko00000,ko00001,ko01000	HAD-hyrolase-like
PIBGAFCF_02599	0.0	lytS	2.7.13.3	-	T	ko:K07704	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PIBGAFCF_02600	8.26e-165	lytT	-	-	T	ko:K07705	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG3279 Response regulator of the LytR AlgR family
PIBGAFCF_02601	3.71e-65	-	-	-	S	ko:K05338	ko02020,map02020	ko00000,ko00001,ko02000	effector of murein hydrolase LrgA
PIBGAFCF_02602	1.21e-144	lrgB	-	-	M	ko:K05339	ko02020,map02020	ko00000,ko00001	Inhibits the expression or activity of extracellular murein hydrolases by interacting, possibly with LrgA, with the holin-like protein CidA. The LrgAB and CidA proteins may affect the proton motive force of the membrane. May be involved in programmed cell death (PCD), possibly triggering PCD in response to antibiotics and environmental stresses
PIBGAFCF_02603	1.81e-111	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PIBGAFCF_02604	3.93e-37	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
PIBGAFCF_02605	3.26e-76	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PIBGAFCF_02606	5.91e-51	ysdA	-	-	S	-	-	-	Membrane
PIBGAFCF_02607	4.11e-82	ysdB	-	-	S	-	-	-	Sigma-w pathway protein YsdB
PIBGAFCF_02608	6.18e-262	ysdC	-	-	G	-	-	-	COG1363 Cellulase M and related proteins
PIBGAFCF_02609	6.16e-235	abnA	3.2.1.99	GH43	G	ko:K06113	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 43 family
PIBGAFCF_02610	0.0	araA	5.3.1.4	-	G	ko:K01804	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of L-arabinose to L-ribulose
PIBGAFCF_02611	0.0	araB	2.7.1.16	-	C	ko:K00853	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	Belongs to the ribulokinase family
PIBGAFCF_02612	1.4e-169	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
PIBGAFCF_02613	1.56e-174	araL	-	-	G	ko:K02101	-	ko00000	Haloacid dehalogenase-like hydrolase
PIBGAFCF_02614	6.32e-05	araM	1.1.1.261	-	I	ko:K00096	ko00564,map00564	ko00000,ko00001,ko01000	Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P). The G1P thus generated is probably used for the synthesis of phosphoglycerolipids in Gram-positive bacterial species
PIBGAFCF_02615	4.26e-234	araM	1.1.1.261	-	I	ko:K00096	ko00564,map00564	ko00000,ko00001,ko01000	Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P). The G1P thus generated is probably used for the synthesis of phosphoglycerolipids in Gram-positive bacterial species
PIBGAFCF_02616	8.03e-314	araN	-	-	G	ko:K17234	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	carbohydrate transport
PIBGAFCF_02617	9.46e-210	araP	-	-	P	ko:K10189,ko:K10241,ko:K17235	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PFAM binding-protein-dependent transport systems inner membrane component
PIBGAFCF_02618	2.11e-78	araQ	-	-	G	ko:K17236	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	transport system permease
PIBGAFCF_02619	3.5e-69	abfA	3.2.1.55	GH51	G	ko:K01209	ko00520,map00520	ko00000,ko00001,ko01000	alpha-L-arabinofuranosidase activity
PIBGAFCF_02621	1.9e-09	yvaO	-	-	K	ko:K22299	-	ko00000,ko03000	transcriptional
PIBGAFCF_02623	1.1e-14	-	-	-	-	-	-	-	-
PIBGAFCF_02624	1.67e-15	-	-	-	S	-	-	-	Protein of unknown function (DUF2815)
PIBGAFCF_02625	0.0	-	-	-	L	-	-	-	Virulence-associated protein E
PIBGAFCF_02626	8.06e-27	-	-	-	S	-	-	-	VRR_NUC
PIBGAFCF_02627	3.74e-288	-	-	-	KL	-	-	-	SNF2 family N-terminal domain
PIBGAFCF_02628	4.27e-64	-	-	-	-	-	-	-	-
PIBGAFCF_02630	2.38e-74	-	-	-	L	-	-	-	Terminase, small subunit
PIBGAFCF_02631	6.45e-182	terL	-	-	S	-	-	-	Terminase
PIBGAFCF_02633	8.49e-220	-	-	-	S	-	-	-	portal protein
PIBGAFCF_02634	1.69e-95	-	-	-	S	ko:K06904	-	ko00000	Caudovirus prohead serine protease
PIBGAFCF_02635	2.4e-167	-	-	-	S	-	-	-	capsid protein
PIBGAFCF_02636	5.73e-32	-	-	-	-	-	-	-	-
PIBGAFCF_02637	5.7e-11	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
PIBGAFCF_02638	1.05e-40	-	-	-	S	-	-	-	Phage head-tail joining protein
PIBGAFCF_02639	5.13e-43	-	-	-	S	-	-	-	Bacteriophage HK97-gp10, putative tail-component
PIBGAFCF_02641	8.06e-43	-	-	-	S	-	-	-	Phage tail tube protein
PIBGAFCF_02643	0.0	-	-	-	D	-	-	-	Phage tail tape measure protein
PIBGAFCF_02644	6.57e-149	-	-	-	S	-	-	-	Phage tail protein
PIBGAFCF_02645	0.0	acm2	3.2.1.17	-	NU	ko:K01185	-	ko00000,ko01000	Prophage endopeptidase tail
PIBGAFCF_02646	0.0	-	-	-	M	-	-	-	Pectate lyase superfamily protein
PIBGAFCF_02647	6.89e-211	-	-	-	S	-	-	-	Domain of unknown function (DUF2479)
PIBGAFCF_02650	2.25e-76	-	-	-	S	-	-	-	Pfam:Phage_holin_4_1
PIBGAFCF_02651	5.17e-88	xlyA	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	n-acetylmuramoyl-L-alanine amidase
PIBGAFCF_02653	3.22e-63	-	-	-	-	-	-	-	-
PIBGAFCF_02654	1.06e-193	csn	3.2.1.132	-	M	ko:K01233	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Aids in the defense against invading fungal pathogens by degrading their cell wall chitosan
PIBGAFCF_02655	7.45e-94	yncE	-	-	S	-	-	-	Protein of unknown function (DUF2691)
PIBGAFCF_02656	1.09e-128	-	-	-	Q	-	-	-	ubiE/COQ5 methyltransferase family
PIBGAFCF_02657	2.19e-251	yurR	1.4.5.1	-	E	ko:K00285	ko00360,map00360	ko00000,ko00001,ko01000	COG0665 Glycine D-amino acid oxidases (deaminating)
PIBGAFCF_02658	1.36e-84	yurQ	-	-	L	-	-	-	COG0322 Nuclease subunit of the excinuclease complex
PIBGAFCF_02662	1.34e-95	-	-	-	-	-	-	-	-
PIBGAFCF_02664	8.02e-204	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PIBGAFCF_02665	8.37e-232	frlB	-	-	M	ko:K10708	-	ko00000,ko01000	Catalyzes the conversion of a range of fructosamine 6- phosphates to glucose 6-phosphate and a free amino acid
PIBGAFCF_02666	4.58e-305	yurO	-	-	G	ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1653 ABC-type sugar transport system, periplasmic component
PIBGAFCF_02667	7.16e-201	yurN	-	-	G	ko:K10118	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
PIBGAFCF_02668	2.91e-199	-	-	-	P	ko:K10119	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0395 ABC-type sugar transport system, permease component
PIBGAFCF_02669	6.94e-202	-	2.7.1.218	-	G	ko:K10710	-	ko00000,ko01000	pfkB family carbohydrate kinase
PIBGAFCF_02670	8.02e-171	frlR1	-	-	K	ko:K03710,ko:K10711	-	ko00000,ko03000	UTRA
PIBGAFCF_02671	1.49e-252	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PIBGAFCF_02672	3.33e-209	bsn	-	-	L	-	-	-	Ribonuclease
PIBGAFCF_02673	7.27e-285	pucF	3.5.3.9	-	E	ko:K02083	ko00230,ko01120,map00230,map01120	ko00000,ko00001,ko01000,ko01002	COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases
PIBGAFCF_02674	2.55e-287	pucG	2.6.1.112, 2.6.1.44, 2.6.1.45, 2.6.1.51	-	E	ko:K00830,ko:K00839	ko00230,ko00250,ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko04146,map00230,map00250,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map04146	ko00000,ko00001,ko00002,ko01000,ko01007	COG0075 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase
PIBGAFCF_02675	8.83e-267	blt	-	-	EGP	ko:K08153	-	ko00000,ko00002,ko02000	COG0477 Permeases of the major facilitator superfamily
PIBGAFCF_02676	6.3e-86	-	-	-	-	-	-	-	-
PIBGAFCF_02677	0.0	pucR	-	-	QT	ko:K09684	-	ko00000,ko03000	COG2508 Regulator of polyketide synthase expression
PIBGAFCF_02678	0.0	allB	3.5.2.5	-	F	ko:K01466	ko00230,ko01100,ko01120,map00230,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of allantoin (5- ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring
PIBGAFCF_02679	2.23e-73	-	-	-	S	-	-	-	phosphoglycolate phosphatase activity
PIBGAFCF_02680	7.05e-215	yunF	-	-	S	-	-	-	Protein of unknown function DUF72
PIBGAFCF_02681	5.58e-182	yunE	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
PIBGAFCF_02682	0.0	yunD	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
PIBGAFCF_02683	2.12e-179	ywfH	-	-	IQ	ko:K19550	ko01130,map01130	ko00000,ko00001,ko00002,ko01000	Enoyl-(Acyl carrier protein) reductase
PIBGAFCF_02684	1.6e-290	ywfG	-	-	E	ko:K08969,ko:K19549	ko00270,ko01100,ko01130,map00270,map01100,map01130	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase class I and II
PIBGAFCF_02685	8.24e-224	bacE	-	-	EGP	ko:K19552	-	ko00000,ko02000	Part of the bacilysin biosynthesis operon. May be involved in self-resistance to bacilysin by permitting efflux of this antibiotic
PIBGAFCF_02686	0.0	bacD	6.3.2.49	-	F	ko:K13037	ko01130,map01130	ko00000,ko00001,ko00002,ko01000	Part of the bacABCDEFG operon responsible for the biosynthesis of bacilysin, an irreversible inactivator of the glutaminase domain of glucosamine synthetase. Catalyzes the formation of alpha-dipeptides from various L-amino acids in the presence of ATP. In vivo catalyzes the ligation of L-alanine and L-anticapsin (epoxycyclohexanonyl-Ala) to produce the final bacilysin antibiotic (L-Ala-L-4S-cyclohexenonyl-Ala dipeptide)
PIBGAFCF_02687	2.21e-178	bacC	1.1.1.385	-	IQ	ko:K19548	ko01130,map01130	ko00000,ko00001,ko00002,ko01000	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PIBGAFCF_02688	4.67e-174	bacB	5.3.3.19	-	S	ko:K19547	ko01130,map01130	ko00000,ko00001,ko00002,ko01000	Part of the bacABCDEF operon responsible for the biosynthesis of the nonribosomally synthesized dipeptide antibiotic bacilysin, composed of L-alanine and L-anticapsin. Bacilysin is an irreversible inactivator of the glutaminase domain of glucosamine synthetase. BacB catalyzes the allylic isomerization of the
PIBGAFCF_02689	4.49e-143	bacA	4.1.1.100	-	E	ko:K19546	ko01130,map01130	ko00000,ko00001,ko00002,ko01000	Part of the bacABCDEF operon responsible for the biosynthesis of the nonribosomally synthesized dipeptide antibiotic bacilysin, composed of L-alanine and L-anticapsin. Bacilysin is an irreversible inactivator of the glutaminase domain of glucosamine synthetase. BacA is an unusual prephenate decarboxylase that avoids the typical aromatization of the cyclohexadienol ring of prephenate. BacA catalyzes the protonation of prephenate (1-carboxy-4-hydroxy-alpha-oxo-2,5-cyclohexadiene-1- propanoic acid) at C6 position, followed by a decarboxylation to produce the endocyclic-delta(4),delta(8)-7R-dihydro- hydroxyphenylpyruvate (en-H2HPP). En-H2HPP is able to undergo a slow nonenzymatic isomerization to produce the exocyclic- delta(3),delta(5)-dihydro-hydroxyphenylpyruvate (ex-H2HPP). BacA isomerizes only the pro-R double bond in prephenate
PIBGAFCF_02690	1.14e-276	ywfA	-	-	EGP	-	-	-	-transporter
PIBGAFCF_02691	9.06e-238	tcaB	-	-	EGP	ko:K07552	-	ko00000,ko02000	-transporter
PIBGAFCF_02692	0.0	rocC	-	-	E	ko:K02205,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
PIBGAFCF_02693	0.0	rocB	-	-	E	-	-	-	arginine degradation protein
PIBGAFCF_02694	0.0	rocA	1.2.1.88	-	C	ko:K00294	ko00250,ko00330,ko01100,map00250,map00330,map01100	ko00000,ko00001,ko01000	Belongs to the aldehyde dehydrogenase family. RocA subfamily
PIBGAFCF_02695	8.64e-312	rocG	1.4.1.2	-	E	ko:K00260	ko00220,ko00250,ko00430,ko00910,ko01100,map00220,map00250,map00430,map00910,map01100	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
PIBGAFCF_02696	4.02e-80	-	-	-	-	-	-	-	-
PIBGAFCF_02697	2.6e-109	spsL	5.1.3.13	-	M	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Spore Coat
PIBGAFCF_02698	3.3e-199	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PIBGAFCF_02699	5.41e-226	spsJ	4.2.1.46	-	M	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PIBGAFCF_02700	2.9e-170	spsI	2.7.7.24	-	M	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PIBGAFCF_02701	9.02e-214	spsG	-	-	M	-	-	-	Spore Coat
PIBGAFCF_02702	5.52e-160	spsF	-	-	M	ko:K07257	-	ko00000	Spore Coat
PIBGAFCF_02703	2.97e-266	pseI	2.5.1.56, 2.5.1.97	-	M	ko:K01654,ko:K15898	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	acid synthase
PIBGAFCF_02704	6.34e-195	spsD	2.3.1.210	-	K	ko:K16704	-	ko00000,ko01000	Spore Coat
PIBGAFCF_02705	2.58e-275	spsC	2.6.1.102	-	E	ko:K13010	ko00520,map00520	ko00000,ko00001,ko01000,ko01005,ko01007	Belongs to the DegT DnrJ EryC1 family
PIBGAFCF_02706	0.0	spsB	-	-	M	-	-	-	Capsule polysaccharide biosynthesis protein
PIBGAFCF_02707	4.13e-180	spsA	-	-	M	-	-	-	Spore Coat
PIBGAFCF_02708	1.29e-83	gerQ	-	-	S	ko:K06305	-	ko00000	Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA
PIBGAFCF_02709	4.39e-76	ywdK	-	-	S	-	-	-	small membrane protein
PIBGAFCF_02710	3.47e-287	ywdJ	-	-	F	-	-	-	Xanthine uracil
PIBGAFCF_02711	2.73e-56	ywdI	-	-	S	-	-	-	Family of unknown function (DUF5327)
PIBGAFCF_02712	2.42e-169	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PIBGAFCF_02713	1.44e-186	ywdF	-	-	S	-	-	-	Glycosyltransferase like family 2
PIBGAFCF_02715	2.79e-185	pdxK	2.7.1.35, 2.7.1.49, 2.7.4.7	-	H	ko:K00868,ko:K00941	ko00730,ko00750,ko01100,map00730,map00750,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
PIBGAFCF_02716	6.09e-27	ywdA	-	-	-	-	-	-	-
PIBGAFCF_02717	0.0	sacA	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
PIBGAFCF_02718	7.23e-316	sacP	2.7.1.211	-	G	ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PIBGAFCF_02719	1.29e-193	sacT	-	-	K	ko:K03488	-	ko00000,ko03000	transcriptional antiterminator
PIBGAFCF_02721	0.0	prtS	3.4.21.110, 3.4.21.96	-	O	ko:K01361,ko:K08652,ko:K14647	ko02024,map02024	ko00000,ko00001,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
PIBGAFCF_02722	1.83e-233	ywcH	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PIBGAFCF_02723	1.26e-150	-	-	-	K	-	-	-	WYL domain
PIBGAFCF_02724	8.59e-162	ucpA	-	-	IQ	-	-	-	Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PIBGAFCF_02725	4.61e-56	-	-	-	S	-	-	-	Ketosteroid isomerase-related protein
PIBGAFCF_02726	1.36e-39	-	-	-	S	-	-	-	PFAM Stress responsive alpha-beta barrel
PIBGAFCF_02727	1.1e-176	nfrA1	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	Oxidoreductase
PIBGAFCF_02728	1.84e-262	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
PIBGAFCF_02729	1.68e-87	ysnE	-	-	K	ko:K03829	-	ko00000,ko01000	acetyltransferase
PIBGAFCF_02730	1.5e-41	ywcE	-	-	S	-	-	-	Required for proper spore morphogenesis. Important for spore germination
PIBGAFCF_02731	1.08e-80	qoxD	1.10.3.12	-	C	ko:K02829	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	quinol oxidase, subunit
PIBGAFCF_02732	2.84e-143	qoxC	1.10.3.12	-	C	ko:K02828	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	quinol oxidase, subunit
PIBGAFCF_02733	0.0	qoxB	1.10.3.12	-	C	ko:K02827	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
PIBGAFCF_02734	3.01e-226	qoxA	1.10.3.12	-	C	ko:K02826	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I
PIBGAFCF_02735	5.74e-48	ydaS	-	-	S	-	-	-	membrane
PIBGAFCF_02736	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
PIBGAFCF_02737	4.36e-265	galK	2.7.1.6	-	G	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PIBGAFCF_02738	7.8e-78	gtcA	-	-	S	-	-	-	GtrA-like protein
PIBGAFCF_02739	1.41e-124	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PIBGAFCF_02741	6.64e-162	-	-	-	H	-	-	-	Methionine biosynthesis protein MetW
PIBGAFCF_02742	4.83e-154	-	-	-	S	-	-	-	Streptomycin biosynthesis protein StrF
PIBGAFCF_02743	5.52e-139	ywbO	-	-	Q	-	-	-	dithiol-disulfide isomerase involved in polyketide biosynthesis
PIBGAFCF_02744	2.81e-296	ywbN	-	-	P	ko:K07223,ko:K16301	-	ko00000,ko01000,ko02000	Dyp-type peroxidase family protein
PIBGAFCF_02745	5.54e-189	ycdO	-	-	P	ko:K07224	-	ko00000,ko02000	periplasmic lipoprotein involved in iron transport
PIBGAFCF_02746	2.41e-246	-	-	-	P	ko:K07243	-	ko00000,ko02000	COG0672 High-affinity Fe2 Pb2 permease
PIBGAFCF_02747	2.72e-139	thiE	2.5.1.3	-	H	ko:K00788	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PIBGAFCF_02748	9.98e-164	thiM	2.7.1.50	-	H	ko:K00878	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PIBGAFCF_02749	2.29e-200	ywbI	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_02750	9.02e-76	ywbH	-	-	S	ko:K06518	-	ko00000,ko02000	Increases the activity of extracellular murein hydrolases possibly by mediating their export via hole formation. Inhibited by the antiholin-like proteins LrgAB. In an unstressed cell, the LrgAB products probably inhibit the function of the CidA protein. When a cell is stressed by the addition of antibiotics or by other factors in the environment, CidA possibly oligomerizes within the bacterial cell membrane, creating lesions that disrupt the proton motive force, which in turn results in loss of cell viability. These lesions are also hypothesized to regulate the subsequent cell lysis by either allowing the murein hydrolases access to the cell wall substrate and or regulating their activity by a
PIBGAFCF_02751	6.2e-142	ywbG	-	-	M	-	-	-	effector of murein hydrolase
PIBGAFCF_02752	1.52e-36	ywbE	-	-	S	-	-	-	Uncharacterized conserved protein (DUF2196)
PIBGAFCF_02753	2.16e-164	mta	-	-	K	ko:K21743	-	ko00000,ko03000	transcriptional
PIBGAFCF_02754	3.45e-80	yjfC	-	-	O	-	-	-	Predicted Zn-dependent protease (DUF2268)
PIBGAFCF_02755	8.69e-31	yjfC	-	-	O	-	-	-	Predicted Zn-dependent protease (DUF2268)
PIBGAFCF_02756	4.69e-281	ywbD	2.1.1.191	-	J	ko:K06969	-	ko00000,ko01000,ko03009	Methyltransferase
PIBGAFCF_02757	1.24e-86	ywbC	4.4.1.5	-	E	ko:K01759	ko00620,map00620	ko00000,ko00001,ko01000	glyoxalase
PIBGAFCF_02758	8.3e-309	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PIBGAFCF_02759	0.0	epr	3.4.21.62	-	O	ko:K01342,ko:K13277	ko02024,map02024	ko00000,ko00001,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
PIBGAFCF_02760	2.87e-205	gspA	-	-	M	-	-	-	General stress
PIBGAFCF_02762	1.13e-66	ywaC	2.7.6.5	-	S	ko:K00951,ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	protein conserved in bacteria
PIBGAFCF_02763	4.3e-67	ywaC	2.7.6.5	-	S	ko:K00951,ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	protein conserved in bacteria
PIBGAFCF_02764	7.25e-213	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the MenA family. Type 1 subfamily
PIBGAFCF_02765	3.51e-18	-	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
PIBGAFCF_02766	0.0	dltA	6.1.1.13	-	Q	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PIBGAFCF_02767	2.45e-289	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	membrane protein involved in D-alanine export
PIBGAFCF_02768	1.96e-49	dltC	6.1.1.13	-	IQ	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PIBGAFCF_02769	3.02e-244	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	COG3966 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PIBGAFCF_02770	1.29e-259	ilvE	2.6.1.42	-	E	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Branched-chain amino acid aminotransferase
PIBGAFCF_02771	4.7e-316	licH	3.2.1.86	GT4	G	ko:K01222	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
PIBGAFCF_02772	1.89e-64	licA	2.7.1.196, 2.7.1.205, 2.7.1.207	-	G	ko:K02759,ko:K02786	ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PIBGAFCF_02773	1.19e-312	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PIBGAFCF_02774	3.67e-65	licB	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	transporter subunit IIB
PIBGAFCF_02775	0.0	licR	-	-	GKT	ko:K03491	-	ko00000,ko03000	Mga helix-turn-helix domain
PIBGAFCF_02776	4.07e-139	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
PIBGAFCF_02777	1.5e-216	-	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PIBGAFCF_02778	9.33e-229	-	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PIBGAFCF_02779	4.01e-32	cbrA3	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
PIBGAFCF_02780	9.31e-159	cbrA3	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
PIBGAFCF_02781	1.06e-66	arsR	-	-	K	ko:K03892,ko:K22043	-	ko00000,ko03000	transcriptional
PIBGAFCF_02782	1.16e-286	arsB	-	-	P	ko:K03893	-	ko00000,ko02000	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
PIBGAFCF_02783	3.25e-64	ydhM	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PIBGAFCF_02784	1.26e-62	ydhN3	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PIBGAFCF_02785	1.84e-298	celB	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PIBGAFCF_02786	0.0	ydhP	3.2.1.21, 3.2.1.85, 3.2.1.86	GT1	G	ko:K01220,ko:K01223,ko:K05350	ko00010,ko00052,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00052,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PIBGAFCF_02787	7.52e-206	gmuE	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	COG1940 Transcriptional regulator sugar kinase
PIBGAFCF_02788	5.01e-226	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
PIBGAFCF_02789	2.24e-237	ydhT1	3.2.1.78	GH26	G	ko:K01218	ko00051,ko02024,map00051,map02024	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 26 family
PIBGAFCF_02790	0.0	katX	1.11.1.6	-	P	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	ko00000,ko00001,ko00002,ko01000	serves to protect cells from the toxic effects of hydrogen peroxide
PIBGAFCF_02791	1.26e-238	yxeI	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolases, choloylglycine hydrolase family
PIBGAFCF_02792	2.06e-313	yxlA	-	-	F	ko:K03457	-	ko00000	Belongs to the purine-cytosine permease (2.A.39) family
PIBGAFCF_02793	8.69e-192	nnrD	4.2.1.136, 5.1.99.6	-	G	ko:K17758,ko:K17759	-	ko00000,ko01000	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PIBGAFCF_02794	0.0	cydD	-	-	V	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ATP-binding protein
PIBGAFCF_02795	0.0	cydC	-	-	V	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ATP-binding
PIBGAFCF_02796	5.08e-238	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome d ubiquinol oxidase, subunit II
PIBGAFCF_02797	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	oxidase, subunit
PIBGAFCF_02798	1.02e-283	cimH	-	-	C	-	-	-	COG3493 Na citrate symporter
PIBGAFCF_02799	2.39e-191	yxkH	-	-	G	-	-	-	Polysaccharide deacetylase
PIBGAFCF_02800	3.56e-259	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
PIBGAFCF_02801	1.49e-198	lrp	-	-	QT	-	-	-	PucR C-terminal helix-turn-helix domain
PIBGAFCF_02802	4.82e-190	yxkD	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PIBGAFCF_02804	2.34e-114	yxkC	-	-	S	-	-	-	Domain of unknown function (DUF4352)
PIBGAFCF_02805	7.02e-245	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
PIBGAFCF_02806	5.24e-297	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
PIBGAFCF_02809	3.81e-105	yxjI	-	-	S	-	-	-	LURP-one-related
PIBGAFCF_02810	8.25e-271	yxjG	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Methionine synthase
PIBGAFCF_02811	2.83e-185	yxjB	2.1.1.187	-	Q	ko:K00563	-	ko00000,ko01000,ko03009	Methyltransferase domain
PIBGAFCF_02812	2.49e-262	nupG	-	-	F	ko:K16323	-	ko00000,ko02000	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
PIBGAFCF_02813	1.64e-113	-	-	-	T	-	-	-	Domain of unknown function (DUF4163)
PIBGAFCF_02814	3.23e-60	yxiS	-	-	-	-	-	-	-
PIBGAFCF_02815	3.81e-212	-	-	-	L	-	-	-	DNA synthesis involved in DNA repair
PIBGAFCF_02816	0.0	katE	1.11.1.6	-	P	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	ko00000,ko00001,ko00002,ko01000	serves to protect cells from the toxic effects of hydrogen peroxide
PIBGAFCF_02817	6.39e-281	citH	-	-	C	ko:K03300,ko:K11639	ko02020,map02020	ko00000,ko00001	Citrate transporter
PIBGAFCF_02818	9.73e-176	bglS	-	-	M	-	-	-	licheninase activity
PIBGAFCF_02819	2.11e-183	licT	-	-	K	ko:K03488	-	ko00000,ko03000	transcriptional antiterminator
PIBGAFCF_02820	1.59e-276	yxiO	-	-	S	ko:K06902	ko04138,map04138	ko00000,ko00001,ko02000,ko04131	COG2270 Permeases of the major facilitator superfamily
PIBGAFCF_02821	0.0	dbpA	3.6.4.13	-	JKL	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes
PIBGAFCF_02823	9.75e-27	-	-	-	-	-	-	-	-
PIBGAFCF_02825	9.77e-141	-	-	-	-	-	-	-	-
PIBGAFCF_02826	4.23e-103	-	-	-	-	-	-	-	-
PIBGAFCF_02827	2.91e-85	yxiG	-	-	-	-	-	-	-
PIBGAFCF_02828	9.79e-75	yxxG	-	-	-	-	-	-	-
PIBGAFCF_02830	4.8e-251	pelB	4.2.2.10, 4.2.2.2	-	G	ko:K01728,ko:K01732	ko00040,ko02024,map00040,map02024	ko00000,ko00001,ko01000	Pectate lyase
PIBGAFCF_02831	7.42e-202	yxxF	-	-	EG	-	-	-	EamA-like transporter family
PIBGAFCF_02832	2.44e-94	yxiE	-	-	T	-	-	-	Belongs to the universal stress protein A family
PIBGAFCF_02833	0.0	bglH	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
PIBGAFCF_02834	0.0	bglP	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PIBGAFCF_02835	1.51e-61	-	-	-	L	ko:K07458	-	ko00000,ko01000,ko03400	May nick specific sequences that contain T G mispairs resulting from m5C-deamination
PIBGAFCF_02836	8.04e-176	-	2.1.1.37	-	L	ko:K00558	ko00270,ko01100,ko05206,map00270,map01100,map05206	ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036	C-5 cytosine-specific DNA methylase
PIBGAFCF_02837	4.99e-105	-	-	-	L	-	-	-	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PIBGAFCF_02839	0.0	-	-	-	L	-	-	-	Z1 domain
PIBGAFCF_02840	7.49e-103	-	-	-	S	-	-	-	Putative PD-(D/E)XK family member, (DUF4420)
PIBGAFCF_02841	8.8e-242	-	-	-	S	-	-	-	AIPR protein
PIBGAFCF_02842	0.0	yxiA	3.2.1.99	GH43	G	ko:K06113	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 43 family
PIBGAFCF_02843	6.75e-101	hutP	-	-	K	ko:K09683	-	ko00000,ko03000	Antiterminator that binds to cis-acting regulatory sequences on the mRNA in the presence of histidine, thereby suppressing transcription termination and activating the hut operon for histidine utilization
PIBGAFCF_02844	2.08e-68	hutH	4.3.1.3	-	E	ko:K01745	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Histidine ammonia-lyase
PIBGAFCF_02845	2.19e-237	hutH	4.3.1.3	-	E	ko:K01745	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Histidine ammonia-lyase
PIBGAFCF_02846	0.0	hutU	4.2.1.49	-	E	ko:K01712	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
PIBGAFCF_02847	7.66e-291	hutI	3.5.2.7	-	Q	ko:K01468	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Imidazolone-5-propionate hydrolase
PIBGAFCF_02848	6.73e-216	hutG	3.5.3.8	-	E	ko:K01479	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N-formimidoyl-L-glutamate to L-glutamate and formamide
PIBGAFCF_02849	0.0	hutM	-	-	E	ko:K02205,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
PIBGAFCF_02850	5.23e-295	pdp	2.4.2.2	-	F	ko:K00756	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	phosphorylase
PIBGAFCF_02851	1.35e-263	nupC	-	-	F	ko:K11535	-	ko00000,ko02000	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
PIBGAFCF_02852	4.09e-145	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PIBGAFCF_02853	9.22e-217	deoR	-	-	K	ko:K05346	-	ko00000,ko03000	COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain
PIBGAFCF_02854	1.75e-188	yxeH	-	-	S	-	-	-	hydrolases of the HAD superfamily
PIBGAFCF_02857	9.45e-26	yxeE	-	-	-	-	-	-	-
PIBGAFCF_02859	9.67e-33	yxeD	-	-	-	-	-	-	-
PIBGAFCF_02860	4.86e-47	-	-	-	-	-	-	-	-
PIBGAFCF_02861	6.74e-218	fhuD	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
PIBGAFCF_02862	2.25e-72	yxeA	-	-	S	-	-	-	Protein of unknown function (DUF1093)
PIBGAFCF_02863	0.0	yxdM	-	-	V	ko:K11636	ko02020,map02020	ko00000,ko00001,ko00002,ko02000	ABC transporter (permease)
PIBGAFCF_02864	7.1e-177	yxdL	-	-	V	ko:K11635	ko02020,map02020	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
PIBGAFCF_02865	9.27e-223	yxdK	2.7.13.3	-	T	ko:K11633	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PIBGAFCF_02866	6.33e-157	yxdJ	-	-	T	ko:K11634	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PIBGAFCF_02867	3.58e-54	fbaA	4.1.2.13, 4.1.2.29	-	F	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Produces dihydroxyacetone phosphate (DHAP or glycerone phosphate) and malonic semialdehyde (MSA or 3-oxopropanoate) from 6-phospho-5-dehydro-2-deoxy-D-gluconate (DKGP)
PIBGAFCF_02868	2.52e-53	iolI	5.3.99.11	-	G	ko:K06606	ko00562,ko01120,map00562,map01120	ko00000,ko00001,ko01000	Involved in the reversible interconverion of 2-keto-myo- inositol (2KMI, inosose or 2,4,6 3,5-pentahydroxycyclohexanone) to 1-keto-D-chiro-inositol (1KDCI or 2,3,5 4,6- pentahydroxycyclohexanone)
PIBGAFCF_02869	4.92e-209	iolH	-	-	G	ko:K06605	-	ko00000	Xylose isomerase-like TIM barrel
PIBGAFCF_02870	2.36e-246	iolG	1.1.1.18, 1.1.1.369	-	S	ko:K00010	ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130	ko00000,ko00001,ko01000	Involved in the oxidation of myo-inositol (MI) and D- chiro-inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D-chiro-inositol (1KDCI), respectively
PIBGAFCF_02871	2.76e-289	iolF	-	-	EGP	ko:K06610	-	ko00000,ko02000	Major facilitator superfamily
PIBGAFCF_02872	1.73e-218	iolE	4.2.1.44	-	H	ko:K03335	ko00562,ko01100,ko01120,map00562,map01100,map01120	ko00000,ko00001,ko01000	Catalyzes the dehydration of inosose (2-keto-myo- inositol, 2KMI or 2,4,6 3,5-pentahydroxycyclohexanone) to 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi- inositol)
PIBGAFCF_02873	0.0	iolD	3.7.1.22	-	E	ko:K03336	ko00562,ko01100,ko01120,map00562,map01100,map01120	ko00000,ko00001,ko01000	Involved in the cleavage of the C1-C2 bond of 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy- glucuronate (5DG)
PIBGAFCF_02874	8.2e-57	iolC	2.7.1.92	-	G	ko:K03338	ko00562,ko01100,ko01120,map00562,map01100,map01120	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5- dehydro-2-deoxy-D-gluconate (DKGP)
PIBGAFCF_02875	1.11e-196	iolB	5.3.1.30	-	G	ko:K03337	ko00562,ko01100,ko01120,map00562,map01100,map01120	ko00000,ko00001,ko01000	Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate)
PIBGAFCF_02876	0.0	iolA	1.2.1.18, 1.2.1.27	-	C	ko:K00140	ko00280,ko00410,ko00562,ko00640,ko01100,ko01200,map00280,map00410,map00562,map00640,map01100,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PIBGAFCF_02877	1.75e-174	iolR	-	-	K	ko:K06608,ko:K11534	-	ko00000,ko03000	COG1349 Transcriptional regulators of sugar metabolism
PIBGAFCF_02878	1.72e-215	iolS	-	-	C	ko:K06607	-	ko00000,ko01000	Aldo keto reductase
PIBGAFCF_02879	2.13e-311	csbC	-	-	U	ko:K02100,ko:K06609,ko:K08139	ko04113,map04113	ko00000,ko00001,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PIBGAFCF_02880	0.0	htpG	-	-	O	ko:K04079	ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418	ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147	Molecular chaperone. Has ATPase activity
PIBGAFCF_02881	1.56e-188	yxbG	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
PIBGAFCF_02882	2.06e-129	desR	-	-	T	ko:K07693	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PIBGAFCF_02883	3.16e-243	desK	2.7.13.3	-	T	ko:K07778	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PIBGAFCF_02884	1.04e-247	des	1.14.19.23, 1.14.19.45	-	I	ko:K10255	ko02020,map02020	ko00000,ko00001,ko01000,ko01004	fatty acid desaturase
PIBGAFCF_02885	1.53e-265	yxbF	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
PIBGAFCF_02886	2.4e-313	aldX	1.2.1.3	-	C	ko:K00128	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
PIBGAFCF_02887	2.12e-185	yxaL	-	-	S	-	-	-	PQQ-like domain
PIBGAFCF_02888	5.81e-75	-	-	-	S	-	-	-	Family of unknown function (DUF5391)
PIBGAFCF_02889	3.34e-65	arsR3	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
PIBGAFCF_02890	1.16e-250	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
PIBGAFCF_02891	2.58e-86	yxaI	-	-	S	-	-	-	membrane protein domain
PIBGAFCF_02892	2.86e-83	-	-	-	E	-	-	-	Ring-cleavage extradiol dioxygenase
PIBGAFCF_02893	5.77e-56	-	-	-	E	-	-	-	Ring-cleavage extradiol dioxygenase
PIBGAFCF_02894	9.33e-136	ahpC	1.11.1.15	-	O	ko:K03386	ko04214,map04214	ko00000,ko00001,ko01000,ko04147	Alkyl hydroperoxide reductase
PIBGAFCF_02895	0.0	ahpF	-	-	O	ko:K03387	-	ko00000,ko01000	Alkyl hydroperoxide reductase
PIBGAFCF_02896	9.59e-234	mrjp	-	-	G	-	-	-	Major royal jelly protein
PIBGAFCF_02897	5.11e-301	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	COG1113 Gamma-aminobutyrate permease and related permeases
PIBGAFCF_02898	9.17e-200	-	-	-	K	-	-	-	helix_turn_helix, Deoxyribose operon repressor
PIBGAFCF_02899	2.97e-95	-	-	-	K	-	-	-	Integron-associated effector binding protein
PIBGAFCF_02900	6.31e-98	yjhE	-	-	S	-	-	-	Phage tail protein
PIBGAFCF_02901	7.62e-271	glcP1	-	-	G	ko:K08174	-	ko00000,ko02000	Major Facilitator Superfamily
PIBGAFCF_02902	6.79e-147	gabT	2.6.1.19	-	E	ko:K00823	ko00250,ko00410,ko00640,ko00650,ko01100,ko01120,map00250,map00410,map00640,map00650,map01100,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PIBGAFCF_02903	1.56e-117	gabT	2.6.1.19	-	E	ko:K00823	ko00250,ko00410,ko00640,ko00650,ko01100,ko01120,map00250,map00410,map00640,map00650,map01100,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PIBGAFCF_02904	1.75e-227	suhB	3.1.3.25, 3.1.3.7	-	G	ko:K01082,ko:K01092	ko00521,ko00562,ko00920,ko01100,ko01120,ko01130,ko04070,map00521,map00562,map00920,map01100,map01120,map01130,map04070	ko00000,ko00001,ko00002,ko01000,ko03016	inositol monophosphate 1-phosphatase activity
PIBGAFCF_02905	1.33e-254	-	1.1.1.14, 1.1.1.303, 1.1.1.4	-	E	ko:K00004,ko:K00008	ko00040,ko00051,ko00650,ko01100,map00040,map00051,map00650,map01100	ko00000,ko00001,ko00002,ko01000	alcohol dehydrogenase
PIBGAFCF_02906	7.16e-284	ybaR	-	-	P	ko:K03321	-	ko00000,ko02000	COG0659 Sulfate permease and related transporters (MFS superfamily)
PIBGAFCF_02907	1.35e-216	ybaS	-	-	S	-	-	-	Na -dependent transporter
PIBGAFCF_02908	4.92e-130	ybbA	-	-	S	ko:K07017	-	ko00000	Putative esterase
PIBGAFCF_02909	9.92e-223	feuC	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PIBGAFCF_02910	1.48e-224	feuB	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PIBGAFCF_02911	1.12e-215	feuA	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Iron-uptake system-binding protein
PIBGAFCF_02912	0.0	ybbB	-	-	K	ko:K21701	-	ko00000,ko03000	COG2207 AraC-type DNA-binding domain-containing proteins
PIBGAFCF_02913	4.44e-291	ybbC	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_02914	0.0	ybbD	3.2.1.52	-	G	ko:K01207	ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501	ko00000,ko00001,ko00002,ko01000	Belongs to the glycosyl hydrolase 3 family
PIBGAFCF_02915	6.18e-300	ybbE	3.4.16.4	-	V	ko:K21469	ko00550,map00550	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the UPF0214 family
PIBGAFCF_02916	2.44e-302	ybbF	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PIBGAFCF_02917	5.23e-205	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PIBGAFCF_02918	1.13e-76	ybbJ	-	-	J	-	-	-	acetyltransferase
PIBGAFCF_02919	5.95e-96	ybbK	-	-	S	-	-	-	Protein of unknown function (DUF523)
PIBGAFCF_02925	4.59e-127	sigW	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PIBGAFCF_02926	1.7e-146	rsiW	-	-	K	-	-	-	Is the anti-sigma factor for SigW. The presence of RsiW leads to the inactivation of SigW, and its proteolytic destruction to sigma-W activation
PIBGAFCF_02927	3.01e-186	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PIBGAFCF_02928	1.83e-290	ybbR	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_02929	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PIBGAFCF_02930	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PIBGAFCF_02931	1.17e-21	-	-	-	S	-	-	-	peptidyl-tyrosine sulfation
PIBGAFCF_02932	4.96e-56	-	-	-	O	ko:K03695	ko04213,map04213	ko00000,ko00001,ko03110	ATPase activity
PIBGAFCF_02933	1.23e-119	-	-	-	L	-	-	-	DNA polymerase III
PIBGAFCF_02934	5.91e-68	-	-	-	S	-	-	-	ABC-2 family transporter protein
PIBGAFCF_02935	3.07e-124	ybdN	-	-	-	-	-	-	-
PIBGAFCF_02936	9.57e-165	ybdO	-	-	S	-	-	-	Domain of unknown function (DUF4885)
PIBGAFCF_02937	2.34e-203	dkgB	-	-	S	-	-	-	Aldo/keto reductase family
PIBGAFCF_02938	3.49e-134	yxaC	-	-	M	-	-	-	effector of murein hydrolase
PIBGAFCF_02939	6.65e-66	-	-	-	S	ko:K06518	-	ko00000,ko02000	LrgA family
PIBGAFCF_02940	1.27e-89	-	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PIBGAFCF_02941	0.0	ybxG	-	-	E	ko:K03293	-	ko00000	COG1113 Gamma-aminobutyrate permease and related permeases
PIBGAFCF_02942	1.67e-119	yfnB	3.8.1.2	-	S	ko:K01560,ko:K07025	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
PIBGAFCF_02943	7.04e-226	-	-	-	T	-	-	-	COG4585 Signal transduction histidine kinase
PIBGAFCF_02944	1.58e-129	yfiK	-	-	KT	ko:K02479	-	ko00000,ko02022	LuxR family transcriptional regulator
PIBGAFCF_02945	2.13e-205	yfiL	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	COG1131 ABC-type multidrug transport system, ATPase component
PIBGAFCF_02946	1.12e-240	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	COG0842 ABC-type multidrug transport system, permease component
PIBGAFCF_02947	7.69e-229	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
PIBGAFCF_02948	6.5e-33	-	-	-	-	-	-	-	-
PIBGAFCF_02949	3.66e-103	-	-	-	S	-	-	-	Domain of unknown function (DUF4879)
PIBGAFCF_02950	7.13e-52	csgA	-	-	S	-	-	-	Sigma-G-dependent sporulation-specific SASP protein
PIBGAFCF_02951	8.57e-136	yqeB	-	-	-	-	-	-	-
PIBGAFCF_02952	2.17e-52	ybyB	-	-	-	-	-	-	-
PIBGAFCF_02953	0.0	ybeC	-	-	E	-	-	-	amino acid
PIBGAFCF_02954	1.8e-22	-	-	-	S	-	-	-	Protein of unknown function (DUF2651)
PIBGAFCF_02955	2.63e-209	glpQ	3.1.3.1, 3.1.4.46	-	C	ko:K01113,ko:K01126	ko00564,ko00790,ko01100,ko02020,map00564,map00790,map01100,map02020	ko00000,ko00001,ko00002,ko01000	glycerophosphoryl diester phosphodiesterase
PIBGAFCF_02956	0.0	glpT	-	-	G	ko:K02445	-	ko00000,ko02000	-transporter
PIBGAFCF_02957	1e-23	-	-	-	S	-	-	-	Protein of unknown function (DUF2651)
PIBGAFCF_02958	1.12e-261	yoaI	1.14.14.9	-	Q	ko:K00483	ko00350,ko01120,ko01220,map00350,map01120,map01220	ko00000,ko00001,ko01000	COG2368 Aromatic ring hydroxylase
PIBGAFCF_02960	1.14e-105	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PIBGAFCF_02961	5.91e-239	ypjH	-	-	C	ko:K08317	-	ko00000,ko01000	COG0371 Glycerol dehydrogenase and related enzymes
PIBGAFCF_02962	8.16e-265	purT	2.1.2.2	-	F	ko:K08289	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PIBGAFCF_02963	9.04e-120	pssA	2.7.8.8	-	I	ko:K17103	ko00260,ko00564,ko01100,ko01110,map00260,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PIBGAFCF_02964	3.37e-110	ybfM	-	-	S	-	-	-	SNARE associated Golgi protein
PIBGAFCF_02965	4.85e-191	psd	4.1.1.65	-	I	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)
PIBGAFCF_02966	9.76e-52	ybfN	-	-	-	-	-	-	-
PIBGAFCF_02967	1.78e-239	ybfQ	-	-	S	ko:K07146	-	ko00000	Belongs to the UPF0176 family
PIBGAFCF_02968	1.51e-265	gltP	-	-	C	ko:K11102	-	ko00000,ko02000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PIBGAFCF_02969	6.73e-245	ilvE	2.6.1.42	-	E	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Branched-chain amino acid aminotransferase
PIBGAFCF_02970	7.12e-303	ybgF	-	-	E	ko:K02205,ko:K03293,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
PIBGAFCF_02971	4.63e-225	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine
PIBGAFCF_02972	0.0	agcS	-	-	E	ko:K03310,ko:K11626	ko02020,map02020	ko00000,ko00001	Sodium alanine symporter
PIBGAFCF_02973	5.86e-89	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
PIBGAFCF_02974	4.31e-44	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
PIBGAFCF_02975	2.63e-264	glnJ	2.7.13.3	-	T	ko:K07717	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PIBGAFCF_02976	2.43e-197	glnL	-	-	T	ko:K07719	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Regulator
PIBGAFCF_02977	2.31e-158	ycbJ	-	-	S	ko:K06979	-	br01600,ko00000,ko00002,ko01504	Macrolide 2'-phosphotransferase
PIBGAFCF_02978	3.3e-33	rtpA	-	-	K	-	-	-	Tryptophan RNA-binding attenuator protein inhibitory protein
PIBGAFCF_02979	3.37e-195	ydfM	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PIBGAFCF_02980	3.53e-118	ydfN	-	-	C	ko:K15976	-	ko00000,ko01000	nitroreductase
PIBGAFCF_02981	1.9e-229	ydfO	-	-	E	ko:K15975	-	ko00000	COG0346 Lactoylglutathione lyase and related lyases
PIBGAFCF_02982	1.89e-82	ydfP	-	-	S	ko:K15977	-	ko00000	DoxX
PIBGAFCF_02983	3.11e-73	ydfQ	-	-	CO	-	-	-	Thioredoxin
PIBGAFCF_02984	2.08e-15	-	-	-	L	-	-	-	COG3666 Transposase and inactivated derivatives
PIBGAFCF_02985	2.71e-81	ycbP	-	-	S	-	-	-	Protein of unknown function (DUF2512)
PIBGAFCF_02986	5.22e-102	cwlJ	3.5.1.28	-	M	ko:K01449	-	ko00000,ko01000	Cell wall
PIBGAFCF_02987	0.0	phoD	3.1.3.1	-	P	ko:K01113	ko00790,ko01100,ko02020,map00790,map01100,map02020	ko00000,ko00001,ko00002,ko01000	COG3540 Phosphodiesterase alkaline phosphatase D
PIBGAFCF_02988	8.68e-36	tatAD	-	-	U	ko:K03116	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
PIBGAFCF_02989	8.33e-155	tatC	-	-	U	ko:K03118	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PIBGAFCF_02990	1.99e-153	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PIBGAFCF_02991	3.97e-240	ycbU	-	-	E	-	-	-	Selenocysteine lyase
PIBGAFCF_02992	1.47e-305	lmrB	-	-	EGP	ko:K18926	-	ko00000,ko00002,ko02000	the major facilitator superfamily
PIBGAFCF_02993	3.35e-125	lmrA	-	-	K	ko:K18939	-	ko00000,ko00002,ko03000	Transcriptional regulator
PIBGAFCF_02994	1.17e-39	lip	3.1.1.3	-	S	ko:K01046	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko00002,ko01000	acetyltransferases and hydrolases with the alpha beta hydrolase fold
PIBGAFCF_02995	5.9e-21	lip	3.1.1.3	-	S	ko:K01046	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko00002,ko01000	acetyltransferases and hydrolases with the alpha beta hydrolase fold
PIBGAFCF_02996	1.21e-245	yccF	-	-	K	ko:K07039	-	ko00000	SEC-C motif
PIBGAFCF_02997	6.43e-211	yccK	-	-	C	-	-	-	Aldo keto reductase
PIBGAFCF_02998	1.13e-210	ycdA	-	-	S	-	-	-	Domain of unknown function (DUF5105)
PIBGAFCF_02999	2.82e-300	ycdB	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PIBGAFCF_03000	0.0	ycdC	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PIBGAFCF_03001	5.55e-116	-	-	-	M	ko:K17733	-	ko00000,ko01000,ko01002,ko01011	D-alanyl-D-alanine carboxypeptidase
PIBGAFCF_03002	3.74e-221	rapJ	-	-	S	ko:K06368	-	ko00000,ko01000	Response regulator aspartate phosphatase
PIBGAFCF_03003	6.52e-174	gdh	1.1.1.47	-	IQ	ko:K00034	ko00030,ko01120,ko01200,map00030,map01120,map01200	ko00000,ko00001,ko01000	Enoyl-(Acyl carrier protein) reductase
PIBGAFCF_03004	0.0	malL	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	COG0366 Glycosidases
PIBGAFCF_03005	1.5e-62	-	-	-	S	-	-	-	Domain of unknown function (DUF4188)
PIBGAFCF_03006	1.86e-62	-	-	-	K	-	-	-	Virulence activator alpha C-term
PIBGAFCF_03007	5.72e-214	adcA	-	-	P	ko:K09815	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
PIBGAFCF_03008	1.15e-169	adcC	-	-	P	ko:K02074,ko:K09817	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	'COG1121 ABC-type Mn Zn transport systems, ATPase component'
PIBGAFCF_03009	1.38e-173	adcB	-	-	P	ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1108 ABC-type Mn2 Zn2 transport systems, permease components
PIBGAFCF_03010	8.68e-231	yceB	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PIBGAFCF_03011	9.56e-139	yceC	3.5.4.33	-	T	ko:K11991	-	ko00000,ko01000,ko03016	proteins involved in stress response, homologs of TerZ and
PIBGAFCF_03012	7.32e-136	yceD	-	-	T	ko:K05795	-	ko00000	proteins involved in stress response, homologs of TerZ and
PIBGAFCF_03013	3.36e-136	yceE	-	-	T	ko:K05795	-	ko00000	proteins involved in stress response, homologs of TerZ and
PIBGAFCF_03014	4.28e-178	yceF	-	-	P	ko:K05794	-	ko00000	Protein of unknown function (DUF475)
PIBGAFCF_03015	0.0	yceG	-	-	S	-	-	-	Putative component of 'biosynthetic module'
PIBGAFCF_03016	1.36e-245	yceH	-	-	P	-	-	-	Belongs to the TelA family
PIBGAFCF_03017	2.43e-265	yceI	-	-	P	ko:K08369	-	ko00000,ko02000	Uncharacterised MFS-type transporter YbfB
PIBGAFCF_03019	4.98e-290	opuAA	3.6.3.32	-	E	ko:K02000	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	glycine betaine
PIBGAFCF_03020	1.2e-44	opuAB	-	-	P	ko:K02001	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	glycine betaine
PIBGAFCF_03021	6.79e-118	opuAB	-	-	P	ko:K02001	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	glycine betaine
PIBGAFCF_03022	4.54e-207	opuAC	-	-	E	ko:K02001,ko:K02002	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	glycine betaine
PIBGAFCF_03023	6.41e-261	amhX	-	-	S	ko:K14665	-	ko00000,ko01000,ko01002	amidohydrolase
PIBGAFCF_03024	2.88e-238	ycgA	-	-	S	-	-	-	Membrane
PIBGAFCF_03025	9.33e-31	ycgA	-	-	S	-	-	-	Membrane
PIBGAFCF_03026	1.04e-53	ycgB	-	-	-	-	-	-	-
PIBGAFCF_03027	2.85e-15	-	-	-	S	-	-	-	RDD family
PIBGAFCF_03028	1.55e-226	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
PIBGAFCF_03029	0.0	mdr	-	-	EGP	-	-	-	the major facilitator superfamily
PIBGAFCF_03030	3.16e-97	ycgE	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PIBGAFCF_03032	8.55e-19	xkdS	-	-	S	-	-	-	Protein of unknown function (DUF2634)
PIBGAFCF_03033	8.03e-141	racD	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
PIBGAFCF_03034	8.72e-34	xkdR	-	-	S	-	-	-	Protein of unknown function (DUF2577)
PIBGAFCF_03035	1.23e-174	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	Reductase
PIBGAFCF_03036	1.29e-89	-	-	-	K	-	-	-	MerR family transcriptional regulator
PIBGAFCF_03037	6.77e-21	xkdG	-	-	S	-	-	-	Phage capsid family
PIBGAFCF_03038	1.25e-202	-	-	-	S	-	-	-	Carbohydrate esterase, sialic acid-specific acetylesterase
PIBGAFCF_03039	4.16e-79	-	-	-	K	-	-	-	Transcriptional regulator PadR-like family
PIBGAFCF_03040	3.5e-47	ydeE	-	-	K	ko:K13653	-	ko00000,ko03000	AraC family transcriptional regulator
PIBGAFCF_03042	1.84e-126	yqaC	-	-	F	-	-	-	adenylate kinase activity
PIBGAFCF_03043	5.34e-280	tetL	-	-	EGP	ko:K08168	-	ko00000,ko00002,ko01504,ko02000	COG0477 Permeases of the major facilitator superfamily
PIBGAFCF_03044	5.62e-85	-	-	-	K	ko:K19273	-	ko00000,ko01000,ko01504	Acetyltransferase (GNAT) domain
PIBGAFCF_03045	2.76e-120	-	-	-	S	-	-	-	DinB family
PIBGAFCF_03047	1.14e-187	supH	-	-	S	-	-	-	hydrolase
PIBGAFCF_03048	5.2e-93	supH	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PIBGAFCF_03049	7.33e-67	supH	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
PIBGAFCF_03050	7.73e-85	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
PIBGAFCF_03051	3.2e-65	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
PIBGAFCF_03052	9.08e-234	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
PIBGAFCF_03053	0.0	manP	2.7.1.202	-	G	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PIBGAFCF_03054	0.0	manR	-	-	GKT	ko:K02538,ko:K03491	-	ko00000,ko03000	transcriptional antiterminator
PIBGAFCF_03055	2.25e-227	romA	-	-	S	-	-	-	Beta-lactamase superfamily domain
PIBGAFCF_03056	1.88e-106	ebsC	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PIBGAFCF_03057	5.33e-211	yybE	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_03058	1.32e-270	yybF1	-	-	EGP	ko:K08224	-	ko00000,ko02000	COG0477 Permeases of the major facilitator superfamily
PIBGAFCF_03059	0.0	yrhJ	1.14.14.1, 1.6.2.4	-	C	ko:K14338	ko00071,ko00380,ko00627,ko01120,map00071,map00380,map00627,map01120	ko00000,ko00001,ko00199,ko01000	Belongs to the cytochrome P450 family
PIBGAFCF_03060	4.77e-130	-	-	-	K	ko:K22106	-	ko00000,ko03000	Tetracycline repressor, C-terminal all-alpha domain
PIBGAFCF_03061	3.04e-120	yrhH	-	-	Q	-	-	-	methyltransferase
PIBGAFCF_03062	2.37e-07	-	-	-	S	-	-	-	Probable sporulation protein (Bac_small_yrzI)
PIBGAFCF_03063	4.62e-182	yrhG	-	-	P	ko:K21993	-	ko00000,ko02000	Formate nitrite
PIBGAFCF_03064	1.48e-78	yrhF	-	-	S	-	-	-	Uncharacterized conserved protein (DUF2294)
PIBGAFCF_03065	0.0	yrhE	1.17.1.9	-	C	ko:K00123	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	ko00000,ko00001,ko01000	formate dehydrogenase, alpha subunit
PIBGAFCF_03066	4.76e-106	yrhD	-	-	S	-	-	-	Protein of unknown function (DUF1641)
PIBGAFCF_03067	1.35e-46	yrhC	-	-	S	-	-	-	YrhC-like protein
PIBGAFCF_03068	7.59e-268	mccB	4.4.1.1, 4.4.1.2, 4.4.1.8	-	E	ko:K01760,ko:K17217	ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
PIBGAFCF_03069	2.28e-218	mccA	2.5.1.134, 2.5.1.47	-	E	ko:K01738,ko:K17216	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Cysteine synthase
PIBGAFCF_03070	5.64e-161	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PIBGAFCF_03071	1.4e-152	yrrT	-	-	Q	ko:K17462	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Could be a S-adenosyl-L-methionine-dependent methyltransferase
PIBGAFCF_03072	1.78e-38	yrzA	-	-	S	-	-	-	Protein of unknown function (DUF2536)
PIBGAFCF_03073	9.17e-119	yrrS	-	-	S	-	-	-	Protein of unknown function (DUF1510)
PIBGAFCF_03074	0.0	pbpI	-	-	M	ko:K21468	-	ko00000,ko01011	Penicillin-binding Protein
PIBGAFCF_03075	1.62e-101	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PIBGAFCF_03076	2.61e-147	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Cytidine monophosphokinase
PIBGAFCF_03077	1.88e-312	yrrO	-	-	O	ko:K08303	ko05120,map05120	ko00000,ko00001,ko01000,ko01002	COG0826 Collagenase and related proteases
PIBGAFCF_03078	6.3e-222	yrrN	-	-	O	ko:K08303	ko05120,map05120	ko00000,ko00001,ko01000,ko01002	Peptidase U32
PIBGAFCF_03079	4.49e-151	yrrM	2.1.1.104	-	S	ko:K00588	ko00360,ko00940,ko00941,ko00945,ko01100,ko01110,map00360,map00940,map00941,map00945,map01100,map01110	ko00000,ko00001,ko00002,ko01000	O-methyltransferase
PIBGAFCF_03080	7.74e-257	mltG	-	-	S	ko:K07082	-	ko00000	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PIBGAFCF_03081	7.2e-61	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
PIBGAFCF_03082	2.72e-93	yrrK	-	-	L	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PIBGAFCF_03083	1.1e-55	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
PIBGAFCF_03084	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PIBGAFCF_03085	4.09e-231	yrrI	-	-	S	-	-	-	AI-2E family transporter
PIBGAFCF_03086	4.93e-100	glnQ	-	-	E	ko:K09972,ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1126 ABC-type polar amino acid transport system, ATPase component
PIBGAFCF_03087	1.15e-52	glnQ	-	-	E	ko:K09972,ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1126 ABC-type polar amino acid transport system, ATPase component
PIBGAFCF_03088	5.82e-185	glnH	-	-	ET	ko:K09969,ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 3 family
PIBGAFCF_03089	4.6e-139	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PIBGAFCF_03090	1.41e-134	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
PIBGAFCF_03091	6.52e-13	-	-	-	S	-	-	-	Protein of unknown function (DUF3918)
PIBGAFCF_03092	8.4e-42	yrzR	-	-	-	-	-	-	-
PIBGAFCF_03093	4.28e-99	yrrD	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_03094	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PIBGAFCF_03095	1.12e-23	yrrB	-	-	S	-	-	-	COG0457 FOG TPR repeat
PIBGAFCF_03096	1.33e-277	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PIBGAFCF_03097	2.35e-266	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Cysteine desulfurase
PIBGAFCF_03098	3.74e-83	cymR	-	-	K	ko:K17472	-	ko00000,ko03000	Transcriptional regulator
PIBGAFCF_03099	4.18e-300	rarA	-	-	L	ko:K07478	-	ko00000	COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase
PIBGAFCF_03100	1.68e-178	yrvM	-	-	H	ko:K22132	-	ko00000,ko03016	COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
PIBGAFCF_03101	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
PIBGAFCF_03102	7.9e-306	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
PIBGAFCF_03105	0.0	lytH	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	COG3103 SH3 domain protein
PIBGAFCF_03106	4.07e-97	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PIBGAFCF_03107	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PIBGAFCF_03108	1.71e-116	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PIBGAFCF_03109	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
PIBGAFCF_03110	7.18e-59	yrvD	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
PIBGAFCF_03111	3.74e-104	trkA1	-	-	P	ko:K07228	-	ko00000	regulatory, ligand-binding protein related to C-terminal domains of K channels
PIBGAFCF_03112	0.0	secD	-	-	U	ko:K03072,ko:K12257	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
PIBGAFCF_03113	2.26e-64	yrzD	-	-	S	-	-	-	Post-transcriptional regulator
PIBGAFCF_03114	0.0	spoVB	-	-	S	ko:K06409	-	ko00000,ko02000	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PIBGAFCF_03115	1.16e-133	yrbG	-	-	S	-	-	-	membrane
PIBGAFCF_03116	3.7e-80	yrzE	-	-	S	-	-	-	Protein of unknown function (DUF3792)
PIBGAFCF_03117	1.03e-50	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase subunit YajC
PIBGAFCF_03118	9.18e-290	tgt	2.4.2.29	-	F	ko:K00773	-	ko00000,ko01000,ko03016	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PIBGAFCF_03119	1.12e-243	queA	2.4.99.17	-	J	ko:K07568	-	ko00000,ko01000,ko03016	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PIBGAFCF_03120	3.4e-29	yrzS	-	-	S	-	-	-	Protein of unknown function (DUF2905)
PIBGAFCF_03121	6.61e-232	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PIBGAFCF_03122	8.13e-137	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PIBGAFCF_03123	1.16e-118	bofC	-	-	S	ko:K06318	-	ko00000	BofC C-terminal domain
PIBGAFCF_03125	1.26e-60	-	-	-	S	ko:K06345	-	ko00000	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PIBGAFCF_03126	4.39e-212	safA	-	-	M	ko:K06370	-	ko00000	spore coat assembly protein SafA
PIBGAFCF_03127	4.89e-262	nadA	2.5.1.72	-	H	ko:K03517	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
PIBGAFCF_03128	1.3e-180	nadC	2.4.2.19	-	H	ko:K00767	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NadC ModD family
PIBGAFCF_03129	0.0	nadB	1.4.3.16	-	H	ko:K00278	ko00250,ko00760,ko01100,map00250,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of L-aspartate to iminoaspartate
PIBGAFCF_03130	8.23e-269	nifS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Cysteine desulfurase
PIBGAFCF_03131	1.49e-115	yrxA	-	-	S	ko:K07105	-	ko00000	small molecule binding protein (contains 3H domain)
PIBGAFCF_03132	4.34e-201	pheA	4.2.1.51	-	E	ko:K04518	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Prephenate dehydratase
PIBGAFCF_03133	5.94e-95	pheB	5.4.99.5	-	S	ko:K06209	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the UPF0735 family
PIBGAFCF_03134	2.37e-309	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PIBGAFCF_03135	2.87e-137	spo0B	-	-	T	ko:K06375	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko01000	Sporulation initiation phospho-transferase B, C-terminal
PIBGAFCF_03136	7.74e-61	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
PIBGAFCF_03137	5.78e-74	ysxB	-	-	J	ko:K07584	-	ko00000	ribosomal protein
PIBGAFCF_03138	1.28e-65	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
PIBGAFCF_03139	3.7e-199	spoIVFB	-	-	S	ko:K06402	-	ko00000,ko01000,ko01002	Stage IV sporulation protein
PIBGAFCF_03140	2.65e-177	spoIVFA	-	-	M	ko:K06401	-	ko00000	COG0739 Membrane proteins related to metalloendopeptidases
PIBGAFCF_03141	1.61e-183	minD	-	-	D	ko:K03609	-	ko00000,ko03036,ko04812	Belongs to the ParA family
PIBGAFCF_03142	1.61e-153	minC	-	-	D	ko:K03610	-	ko00000,ko03036,ko04812	Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
PIBGAFCF_03143	3.98e-107	mreD	-	-	M	ko:K03571	-	ko00000,ko03036	shape-determining protein
PIBGAFCF_03144	4.16e-200	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
PIBGAFCF_03145	2.91e-232	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Rod shape-determining protein MreB
PIBGAFCF_03146	1.19e-162	radC	-	-	E	ko:K03630	-	ko00000	Belongs to the UPF0758 family
PIBGAFCF_03147	1.6e-128	maf	-	-	D	ko:K06287	-	ko00000	septum formation protein Maf
PIBGAFCF_03148	2.51e-192	spoIIB	-	-	S	ko:K06380	-	ko00000	Sporulation related domain
PIBGAFCF_03149	1.4e-159	comC	3.4.23.43	-	NOU	ko:K02236,ko:K02654	-	ko00000,ko00002,ko01000,ko01002,ko02035,ko02044	COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases
PIBGAFCF_03150	2.79e-293	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
PIBGAFCF_03151	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PIBGAFCF_03152	3.61e-34	-	-	-	-	-	-	-	-
PIBGAFCF_03153	3.17e-234	ysxE	-	-	S	-	-	-	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
PIBGAFCF_03154	5.07e-232	spoVID	-	-	M	ko:K06417	-	ko00000	stage VI sporulation protein D
PIBGAFCF_03155	4.08e-306	hemL	5.4.3.8	-	H	ko:K01845	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Glutamate-1-semialdehyde aminotransferase
PIBGAFCF_03156	1.98e-233	hemB	4.2.1.24	-	H	ko:K01698	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the ALAD family
PIBGAFCF_03157	4.99e-176	hemD	4.2.1.75	-	H	ko:K01719	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Uroporphyrinogen-III synthase
PIBGAFCF_03158	6.05e-222	hemC	2.5.1.61	-	H	ko:K01749	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps
PIBGAFCF_03159	6.56e-187	hemX	-	-	O	ko:K02497	-	ko00000	cytochrome C
PIBGAFCF_03160	2.79e-311	hemA	1.2.1.70	-	H	ko:K02492	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
PIBGAFCF_03161	3.63e-110	ysxD	-	-	-	-	-	-	-
PIBGAFCF_03162	8.88e-138	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
PIBGAFCF_03163	0.0	lon	3.4.21.53	-	O	ko:K01338	ko04112,map04112	ko00000,ko00001,ko01000,ko01002	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
PIBGAFCF_03164	0.0	lonB	3.4.21.53	-	LO	ko:K04076	-	ko00000,ko01000,ko01002	Belongs to the peptidase S16 family
PIBGAFCF_03165	8.92e-291	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PIBGAFCF_03166	1.21e-284	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PIBGAFCF_03167	6.44e-239	ysoA	-	-	H	-	-	-	Tetratricopeptide repeat
PIBGAFCF_03168	1.04e-147	leuD	4.2.1.33, 4.2.1.35	-	E	ko:K01704	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PIBGAFCF_03169	0.0	leuC	4.2.1.33, 4.2.1.35	-	E	ko:K01703	ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PIBGAFCF_03170	2.66e-249	leuB	1.1.1.85	-	CE	ko:K00052	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PIBGAFCF_03171	0.0	leuA	2.3.3.13	-	E	ko:K01649	ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PIBGAFCF_03172	6.75e-245	ilvC	1.1.1.86	-	EH	ko:K00053	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PIBGAFCF_03173	1.45e-109	ilvN	2.2.1.6	-	E	ko:K01653,ko:K16785	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,ko02010,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Acetolactate synthase
PIBGAFCF_03174	0.0	ilvB	2.2.1.6	-	E	ko:K01652,ko:K16787	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,ko02010,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Acetolactate synthase
PIBGAFCF_03179	1.78e-113	ysnB	-	-	S	ko:K07095	-	ko00000	Phosphoesterase
PIBGAFCF_03180	3.07e-129	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PIBGAFCF_03181	2.38e-169	rph	2.7.7.56	-	J	ko:K00989	-	ko00000,ko01000,ko03016	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
PIBGAFCF_03182	1.05e-253	gerM	-	-	S	ko:K06298	-	ko00000	COG5401 Spore germination protein
PIBGAFCF_03183	1.06e-192	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
PIBGAFCF_03184	7.32e-95	ysmB	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PIBGAFCF_03185	6.32e-42	gerE	-	-	K	ko:K01994	-	ko00000,ko03000	Transcriptional regulator
PIBGAFCF_03186	8.26e-96	ysmA	-	-	S	ko:K07107	-	ko00000,ko01000	thioesterase
PIBGAFCF_03187	1.77e-188	sdhB	1.3.5.1, 1.3.5.4	-	C	ko:K00240	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	succinate dehydrogenase
PIBGAFCF_03188	0.0	sdhA	1.3.5.1, 1.3.5.4	-	C	ko:K00239	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134	ko00000,ko00001,ko00002,ko01000	succinate dehydrogenase
PIBGAFCF_03189	2.73e-140	sdhC	-	-	C	ko:K00241	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002	succinate dehydrogenase
PIBGAFCF_03190	9.97e-103	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
PIBGAFCF_03191	9.22e-270	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
PIBGAFCF_03192	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PIBGAFCF_03193	1.6e-69	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
PIBGAFCF_03194	0.0	xsa	3.2.1.55	GH51	G	ko:K01209	ko00520,map00520	ko00000,ko00001,ko01000	Alpha-L-arabinofuranosidase C-terminus
PIBGAFCF_03195	4.79e-225	etfA	-	-	C	ko:K03522	-	ko00000,ko04147	Electron transfer flavoprotein
PIBGAFCF_03196	5.83e-176	etfB	-	-	C	ko:K03521	-	ko00000	Electron transfer flavoprotein
PIBGAFCF_03197	2.18e-172	fadB	4.2.1.17	-	I	ko:K13767	ko00071,ko00362,ko01100,ko01120,ko01212,map00071,map00362,map01100,map01120,map01212	ko00000,ko00001,ko00002,ko01000	Belongs to the enoyl-CoA hydratase isomerase family
PIBGAFCF_03198	1.78e-133	fadR	-	-	K	ko:K13770	-	ko00000,ko03000	Transcriptional regulator
PIBGAFCF_03199	0.0	lcfA	6.2.1.3	-	IQ	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
PIBGAFCF_03200	5.4e-149	ywbB	-	-	S	-	-	-	Protein of unknown function (DUF2711)
PIBGAFCF_03201	3.09e-88	yshE	-	-	S	ko:K08989	-	ko00000	membrane
PIBGAFCF_03202	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PIBGAFCF_03203	0.0	polX	-	-	L	ko:K02347	-	ko00000,ko03400	COG1796 DNA polymerase IV (family X)
PIBGAFCF_03204	2.02e-107	yshB	-	-	S	-	-	-	membrane protein, required for colicin V production
PIBGAFCF_03205	4.23e-54	zapA	-	-	D	ko:K09888	-	ko00000,ko03036	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PIBGAFCF_03206	1.64e-210	rnhC	3.1.26.4	-	L	ko:K03471	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PIBGAFCF_03207	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PIBGAFCF_03208	2.98e-247	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PIBGAFCF_03209	2.36e-166	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PIBGAFCF_03210	8.83e-43	sspI	-	-	S	ko:K06426	-	ko00000	Belongs to the SspI family
PIBGAFCF_03211	5.97e-244	cdaR_1	-	-	KT	ko:K02647	-	ko00000,ko03000	regulator
PIBGAFCF_03212	0.0	-	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD binding domain
PIBGAFCF_03213	3.52e-309	glcF	-	-	C	ko:K11473	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001	Glycolate oxidase
PIBGAFCF_03214	0.0	cstA	-	-	T	ko:K06200	-	ko00000	Carbon starvation protein
PIBGAFCF_03215	8.62e-236	abfA	3.2.1.55	GH51	G	ko:K01209	ko00520,map00520	ko00000,ko00001,ko01000	alpha-L-arabinofuranosidase activity
PIBGAFCF_03217	5.89e-138	-	-	-	L	-	-	-	IstB-like ATP binding protein
PIBGAFCF_03218	0.0	-	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
PIBGAFCF_03219	1.88e-299	dex	3.2.1.11	GH66	G	ko:K05988	ko00500,map00500	ko00000,ko00001,ko01000	Glycosyl hydrolase family 66
PIBGAFCF_03220	6.38e-87	prsA	5.2.1.8	-	M	ko:K01802,ko:K07533	-	ko00000,ko01000,ko03110	plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PIBGAFCF_03222	7.67e-200	-	-	-	-	-	-	-	-
PIBGAFCF_03223	2.14e-211	-	-	-	L	-	-	-	AAA domain
PIBGAFCF_03224	1.56e-103	-	-	-	-	-	-	-	-
PIBGAFCF_03225	0.0	-	-	-	J	-	-	-	DnaB-like helicase C terminal domain
PIBGAFCF_03226	1.91e-260	-	-	-	L	-	-	-	DNA primase activity
PIBGAFCF_03227	0.0	-	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
PIBGAFCF_03228	0.0	-	-	-	S	-	-	-	Bacterial DNA polymerase III alpha subunit
PIBGAFCF_03229	9.77e-30	-	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_03232	8.73e-92	tmk	2.1.1.45, 2.7.4.9	-	F	ko:K00560,ko:K00943	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	dTDP biosynthetic process
PIBGAFCF_03233	2.83e-116	yorS	-	-	S	-	-	-	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
PIBGAFCF_03235	1.87e-69	-	2.1.1.113, 2.1.1.72	-	L	ko:K00571,ko:K00590	-	ko00000,ko01000,ko02048	N-4 methylation of cytosine
PIBGAFCF_03236	5.68e-203	ddeI	2.1.1.37	-	L	ko:K00558	ko00270,ko01100,ko05206,map00270,map01100,map05206	ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036	DNA (cytosine-5-)-methyltransferase activity
PIBGAFCF_03249	1.22e-88	-	-	-	S	-	-	-	NrdI Flavodoxin like
PIBGAFCF_03250	1.15e-157	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PIBGAFCF_03251	3.25e-48	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PIBGAFCF_03252	3.71e-207	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PIBGAFCF_03254	2.37e-134	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PIBGAFCF_03255	2.83e-121	-	-	-	L	-	-	-	HNH endonuclease
PIBGAFCF_03256	3.47e-55	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PIBGAFCF_03258	6.38e-16	-	-	-	O	-	-	-	Glutaredoxin
PIBGAFCF_03259	3.14e-94	yncF	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Deoxyuridine 5'-triphosphate
PIBGAFCF_03263	2.21e-191	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PIBGAFCF_03264	2.09e-35	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PIBGAFCF_03267	7.41e-82	-	-	-	-	-	-	-	-
PIBGAFCF_03280	4.03e-115	-	-	-	L	-	-	-	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PIBGAFCF_03283	1.2e-276	-	-	-	M	-	-	-	Parallel beta-helix repeats
PIBGAFCF_03284	2.22e-107	-	-	-	S	-	-	-	Pfam:DUF867
PIBGAFCF_03286	2.54e-10	-	-	-	S	-	-	-	YopX protein
PIBGAFCF_03289	4e-162	yoqW	-	-	S	-	-	-	Belongs to the SOS response-associated peptidase family
PIBGAFCF_03290	4.74e-177	ligB	6.5.1.1, 6.5.1.6, 6.5.1.7	-	L	ko:K01971,ko:K10747	ko03030,ko03410,ko03420,ko03430,ko03450,map03030,map03410,map03420,map03430,map03450	ko00000,ko00001,ko01000,ko03032,ko03400	ATP-dependent DNA ligase
PIBGAFCF_03292	8.7e-75	-	-	-	-	-	-	-	-
PIBGAFCF_03294	2.26e-22	-	-	-	-	-	-	-	-
PIBGAFCF_03298	1.93e-87	-	2.1.1.113	-	L	ko:K00590	-	ko00000,ko01000,ko02048	Belongs to the N(4) N(6)-methyltransferase family
PIBGAFCF_03299	5.48e-32	-	-	-	-	-	-	-	-
PIBGAFCF_03302	3.18e-84	-	-	-	N	-	-	-	bacterial-type flagellum assembly
PIBGAFCF_03311	8.46e-34	-	-	-	-	-	-	-	-
PIBGAFCF_03312	5.7e-240	-	-	-	-	-	-	-	-
PIBGAFCF_03320	3.23e-50	-	-	-	S	-	-	-	HicB_like antitoxin of bacterial toxin-antitoxin system
PIBGAFCF_03329	1.31e-134	-	-	-	S	-	-	-	KAP family P-loop domain
PIBGAFCF_03334	4.89e-33	-	-	-	K	ko:K07727	-	ko00000,ko03000	Cro/C1-type HTH DNA-binding domain
PIBGAFCF_03335	6.01e-89	yoaW	-	-	-	-	-	-	-
PIBGAFCF_03336	1.15e-12	-	-	-	I	-	-	-	Acyltransferase family
PIBGAFCF_03337	1.34e-12	ywlA	-	-	S	-	-	-	Uncharacterised protein family (UPF0715)
PIBGAFCF_03339	4.04e-101	-	-	-	-	-	-	-	-
PIBGAFCF_03345	0.0	-	-	-	S	-	-	-	ATP-dependent DNA helicase activity
PIBGAFCF_03347	6.58e-94	-	-	-	S	-	-	-	N-methyltransferase activity
PIBGAFCF_03348	7.33e-188	-	-	-	S	-	-	-	DNA binding
PIBGAFCF_03349	4.28e-276	-	-	-	-	-	-	-	-
PIBGAFCF_03352	1.21e-71	-	-	-	D	-	-	-	Tubulin/FtsZ family, GTPase domain
PIBGAFCF_03356	0.0	-	-	-	S	-	-	-	RNA-directed RNA polymerase activity
PIBGAFCF_03357	6.84e-109	-	-	-	-	-	-	-	-
PIBGAFCF_03358	2.98e-41	-	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PIBGAFCF_03361	8.2e-287	-	-	-	-	-	-	-	-
PIBGAFCF_03366	3.95e-107	-	-	-	-	-	-	-	-
PIBGAFCF_03370	4.83e-84	-	-	-	-	-	-	-	-
PIBGAFCF_03373	2.07e-70	-	-	-	-	-	-	-	-
PIBGAFCF_03374	4.23e-111	-	-	-	-	-	-	-	-
PIBGAFCF_03375	7.39e-146	-	-	-	-	-	-	-	-
PIBGAFCF_03376	6.04e-78	-	-	-	-	-	-	-	-
PIBGAFCF_03378	2.48e-64	-	-	-	-	-	-	-	-
PIBGAFCF_03379	3.13e-42	-	-	-	-	-	-	-	-
PIBGAFCF_03382	2.02e-106	-	3.1.4.46, 5.4.2.11	-	C	ko:K01126,ko:K01834	ko00010,ko00260,ko00564,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00564,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	glycerophosphoryl diester phosphodiesterase
PIBGAFCF_03383	5.1e-76	-	-	-	-	-	-	-	-
PIBGAFCF_03384	2.22e-65	-	-	-	-	-	-	-	-
PIBGAFCF_03385	4.94e-222	-	-	-	A	-	-	-	Belongs to the 'phage' integrase family
PIBGAFCF_03390	6.52e-149	-	-	-	-	-	-	-	-
PIBGAFCF_03391	0.0	-	-	-	S	-	-	-	peptidoglycan catabolic process
PIBGAFCF_03392	8.77e-109	-	-	-	S	-	-	-	Phage tail protein
PIBGAFCF_03393	3.62e-240	-	-	-	S	-	-	-	Pfam Transposase IS66
PIBGAFCF_03394	2e-136	-	-	-	-	-	-	-	-
PIBGAFCF_03395	0.0	-	-	-	M	-	-	-	Pectate lyase superfamily protein
PIBGAFCF_03396	1.4e-93	xlyB	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	N-acetylmuramoyl-L-alanine amidase
PIBGAFCF_03398	1.76e-43	-	-	-	S	-	-	-	Bacteriophage holin
PIBGAFCF_03400	5.07e-06	-	-	-	-	-	-	-	-
PIBGAFCF_03401	1.94e-122	-	-	-	S	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	ko00000,ko00001,ko01000	Response regulator aspartate phosphatase
PIBGAFCF_03403	8.79e-283	dinB2	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PIBGAFCF_03404	2.1e-52	-	-	-	S	-	-	-	YolD-like protein
PIBGAFCF_03405	4.46e-26	yunB	-	-	S	-	-	-	Sporulation protein YunB (Spo_YunB)
PIBGAFCF_03407	1.16e-23	yqaO	-	-	S	-	-	-	Phage-like element PBSX protein XtrA
PIBGAFCF_03409	1.57e-71	-	-	-	S	-	-	-	Protein of unknown function (DUF1064)
PIBGAFCF_03410	5.52e-28	-	-	-	S	-	-	-	YopX protein
PIBGAFCF_03412	1.54e-152	yqaM	-	-	L	-	-	-	IstB-like ATP binding protein
PIBGAFCF_03413	4.55e-36	yqaL	-	-	L	-	-	-	DnaD domain protein
PIBGAFCF_03414	4.78e-162	recT	-	-	L	ko:K07455	-	ko00000,ko03400	RecT family
PIBGAFCF_03415	1.09e-192	yqaJ	-	-	L	-	-	-	YqaJ-like viral recombinase domain
PIBGAFCF_03419	3.27e-110	-	-	-	-	-	-	-	-
PIBGAFCF_03420	4.76e-76	-	-	-	S	-	-	-	DNA binding
PIBGAFCF_03421	2.39e-48	-	-	-	-	-	-	-	-
PIBGAFCF_03422	1.73e-18	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PIBGAFCF_03423	3.22e-21	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PIBGAFCF_03424	8.41e-82	-	-	-	-	-	-	-	-
PIBGAFCF_03425	4.09e-50	-	-	-	S	-	-	-	Protein of unknown function (DUF4064)
PIBGAFCF_03426	3.68e-35	xkdA	-	-	E	-	-	-	IrrE N-terminal-like domain
PIBGAFCF_03427	1.16e-43	-	-	-	L	-	-	-	Arm DNA-binding domain
PIBGAFCF_03428	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PIBGAFCF_03429	1.24e-57	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PIBGAFCF_03430	9.24e-162	ydiL	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PIBGAFCF_03431	1.11e-37	ydiK	-	-	S	-	-	-	Domain of unknown function (DUF4305)
PIBGAFCF_03432	2.61e-157	tatC	-	-	U	ko:K03118	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PIBGAFCF_03433	1.72e-29	tatA	-	-	U	ko:K03116	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
PIBGAFCF_03434	1.51e-148	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PIBGAFCF_03435	2.95e-117	moaC	4.6.1.17	-	H	ko:K03637	ko00790,ko01100,ko04122,map00790,map01100,map04122	ko00000,ko00001,ko01000	Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)
PIBGAFCF_03436	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter
PIBGAFCF_03437	1.64e-238	tsaD	2.3.1.234	-	O	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PIBGAFCF_03438	5.74e-108	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	This enzyme acetylates the N-terminal alanine of ribosomal protein S18
PIBGAFCF_03439	2.69e-158	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	COG1214 Inactive homolog of metal-dependent proteases
PIBGAFCF_03440	1.44e-109	ydiB	-	-	S	ko:K06925	-	ko00000,ko03016	ATPase or kinase
PIBGAFCF_03441	1.04e-219	thiL	2.7.4.16	-	H	ko:K00946	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
PIBGAFCF_03444	1.35e-216	-	2.1.1.37	-	L	ko:K00558	ko00270,ko01100,ko05206,map00270,map01100,map05206	ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
PIBGAFCF_03446	2.08e-54	-	-	-	S	-	-	-	dUTPase
PIBGAFCF_03449	2.62e-08	-	-	-	S	-	-	-	YopX protein
PIBGAFCF_03454	3.27e-63	-	-	-	-	-	-	-	-
PIBGAFCF_03456	1.76e-22	-	-	-	V	-	-	-	VanZ like family
PIBGAFCF_03457	5.88e-88	xpf	-	-	K	ko:K03088	-	ko00000,ko03021	COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
PIBGAFCF_03459	1.74e-17	-	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_03462	7.49e-103	yqaS	-	-	L	-	-	-	DNA packaging
PIBGAFCF_03463	9.66e-225	-	-	-	S	-	-	-	Pfam:Terminase_3C
PIBGAFCF_03464	9.32e-157	-	-	-	S	-	-	-	Phage portal protein, SPP1 Gp6-like
PIBGAFCF_03465	1.53e-116	-	-	-	S	-	-	-	Phage Mu protein F like protein
PIBGAFCF_03467	3.82e-56	-	-	-	S	-	-	-	Phage minor structural protein GP20
PIBGAFCF_03468	1.85e-61	-	-	-	S	-	-	-	viral capsid
PIBGAFCF_03471	2.05e-36	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
PIBGAFCF_03472	7.37e-38	-	-	-	S	-	-	-	Phage head-tail joining protein
PIBGAFCF_03473	1.29e-49	-	-	-	S	-	-	-	Bacteriophage HK97-gp10, putative tail-component
PIBGAFCF_03474	1.14e-37	-	-	-	S	-	-	-	Protein of unknown function (DUF3168)
PIBGAFCF_03475	3.23e-44	-	-	-	S	-	-	-	Phage tail tube protein
PIBGAFCF_03477	1.85e-186	-	-	-	-	-	-	-	-
PIBGAFCF_03479	3.11e-217	-	-	-	L	-	-	-	Phage minor structural protein
PIBGAFCF_03480	1.8e-21	-	-	-	S	-	-	-	peptidoglycan catabolic process
PIBGAFCF_03484	1.19e-40	xhlA	-	-	S	-	-	-	Haemolysin XhlA
PIBGAFCF_03485	2.07e-37	xhlB	-	-	S	-	-	-	SPP1 phage holin
PIBGAFCF_03486	2e-155	xlyB	3.5.1.28	-	M	ko:K01447	-	ko00000,ko01000	N-acetylmuramoyl-L-alanine amidase
PIBGAFCF_03489	0.0	ykuG	-	-	M	-	-	-	Putative peptidoglycan binding domain
PIBGAFCF_03491	2.21e-81	-	-	-	-	-	-	-	-
PIBGAFCF_03492	0.0	gutR	-	-	K	ko:K16247	-	ko00000,ko03000	NB-ARC domain
PIBGAFCF_03493	9.34e-253	gutB	1.1.1.14	-	E	ko:K00008	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko00002,ko01000	Dehydrogenase
PIBGAFCF_03494	9.02e-311	gutP	-	-	G	ko:K03292,ko:K16248	-	ko00000,ko02000	MFS/sugar transport protein
PIBGAFCF_03495	4.48e-211	ydjE	2.7.1.4	-	G	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	pfkB family carbohydrate kinase
PIBGAFCF_03496	5.98e-40	yjdJ	-	-	S	-	-	-	Domain of unknown function (DUF4306)
PIBGAFCF_03497	4.36e-143	pspA	-	-	KT	ko:K03969	-	ko00000	Phage shock protein A
PIBGAFCF_03498	6.45e-222	ydjG	-	-	L	-	-	-	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PIBGAFCF_03499	3.97e-156	ydjH	-	-	S	ko:K06872	-	ko00000	COG1512 Beta-propeller domains of methanol dehydrogenase type
PIBGAFCF_03500	1.33e-199	ydjI	-	-	S	-	-	-	virion core protein (lumpy skin disease virus)
PIBGAFCF_03501	0.0	oatA	-	-	I	-	-	-	Acyltransferase family
PIBGAFCF_03502	5.52e-184	rsiV	-	-	S	-	-	-	Protein of unknown function (DUF3298)
PIBGAFCF_03503	1.08e-112	sigV	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PIBGAFCF_03504	7.9e-246	ydjL	1.1.1.264, 1.1.1.303, 1.1.1.4	-	E	ko:K00004,ko:K00098	ko00650,map00650	ko00000,ko00001,ko01000	Dehydrogenase
PIBGAFCF_03505	4.58e-82	ydjM	-	-	M	-	-	-	Lytic transglycolase
PIBGAFCF_03506	1.51e-189	ydjN	-	-	U	-	-	-	Involved in the tonB-independent uptake of proteins
PIBGAFCF_03508	9.6e-47	ydjO	-	-	S	-	-	-	Cold-inducible protein YdjO
PIBGAFCF_03509	0.0	cotA	1.16.3.3	-	Q	ko:K06324	-	ko00000,ko01000	multicopper oxidases
PIBGAFCF_03510	2.56e-307	gabP	-	-	E	ko:K11735	-	ko00000,ko02000	COG1113 Gamma-aminobutyrate permease and related permeases
PIBGAFCF_03511	7.59e-180	yeaB	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PIBGAFCF_03512	7.99e-226	yeaC	-	-	S	ko:K03924	-	ko00000,ko01000	COG0714 MoxR-like ATPases
PIBGAFCF_03513	1e-254	yeaD	-	-	S	-	-	-	conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
PIBGAFCF_03514	0.0	yebA	-	-	E	-	-	-	COG1305 Transglutaminase-like enzymes
PIBGAFCF_03515	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
PIBGAFCF_03516	8.68e-118	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
PIBGAFCF_03517	0.0	-	-	-	S	-	-	-	Domain of unknown function (DUF4179)
PIBGAFCF_03518	1.75e-269	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
PIBGAFCF_03519	4.87e-165	yebC	-	-	M	-	-	-	Membrane
PIBGAFCF_03521	1.08e-119	yebE	-	-	S	-	-	-	UPF0316 protein
PIBGAFCF_03522	1.88e-39	yebG	-	-	S	-	-	-	NETI protein
PIBGAFCF_03523	1.87e-107	purE	5.4.99.18	-	F	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PIBGAFCF_03524	1.15e-280	purK	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PIBGAFCF_03525	1.05e-313	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PIBGAFCF_03526	3.8e-163	purC	6.3.2.6	-	F	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the SAICAR synthetase family
PIBGAFCF_03527	2.57e-50	purS	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PIBGAFCF_03528	4.32e-163	purQ	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PIBGAFCF_03529	0.0	purL	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PIBGAFCF_03530	0.0	purF	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PIBGAFCF_03531	2.08e-241	purM	6.3.3.1	-	F	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoribosylformylglycinamidine cyclo-ligase
PIBGAFCF_03532	1.16e-133	purN	2.1.2.2	-	F	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PIBGAFCF_03533	0.0	purH	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	Bifunctional purine biosynthesis protein PurH
PIBGAFCF_03534	4.29e-293	purD	6.3.4.13	-	F	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the GARS family
PIBGAFCF_03535	4.48e-81	-	-	-	K	-	-	-	helix_turn_helix ASNC type
PIBGAFCF_03536	3.96e-173	-	-	-	E	ko:K16263	-	ko00000,ko02000	Amino acid permease
PIBGAFCF_03537	2.05e-33	-	-	-	S	-	-	-	Protein of unknown function (DUF2892)
PIBGAFCF_03538	0.0	yerA	3.5.4.2	-	F	ko:K01486	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	adenine deaminase
PIBGAFCF_03539	2.74e-243	yerB	-	-	S	-	-	-	Protein of unknown function (DUF3048) C-terminal domain
PIBGAFCF_03540	2.03e-67	yerC	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_03541	0.0	yerD	1.4.7.1	-	E	ko:K00284	ko00630,ko00910,ko01120,map00630,map00910,map01120	ko00000,ko00001,ko01000	Belongs to the glutamate synthase family
PIBGAFCF_03542	5.04e-163	pcrB	-	-	I	ko:K07094	-	ko00000,ko01000	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
PIBGAFCF_03543	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
PIBGAFCF_03544	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PIBGAFCF_03545	2.25e-285	camS	-	-	S	-	-	-	COG4851 Protein involved in sex pheromone biosynthesis
PIBGAFCF_03546	6.11e-231	yerI	-	-	S	-	-	-	homoserine kinase type II (protein kinase fold)
PIBGAFCF_03547	1.61e-155	sapB	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC SapB transporter
PIBGAFCF_03548	0.0	putP	-	-	E	ko:K03307,ko:K11928	-	ko00000,ko02000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PIBGAFCF_03549	1.81e-60	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PIBGAFCF_03550	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PIBGAFCF_03551	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PIBGAFCF_03552	1.01e-189	yerO	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_03553	0.0	swrC	-	-	V	ko:K03296	-	ko00000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PIBGAFCF_03554	8.56e-217	dagK	2.7.1.107	-	I	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
PIBGAFCF_03555	0.0	rlmCD	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PIBGAFCF_03556	0.0	-	-	-	L	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
PIBGAFCF_03557	2.88e-204	cylA	-	-	V	ko:K01990,ko:K09695,ko:K11050	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
PIBGAFCF_03558	3.92e-175	cylB	-	-	V	ko:K11051	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-2 type transporter
PIBGAFCF_03559	5.92e-51	-	-	-	S	-	-	-	Protein of unknown function, DUF600
PIBGAFCF_03560	2.35e-73	-	-	-	S	-	-	-	Protein of unknown function, DUF600
PIBGAFCF_03561	2.48e-66	-	-	-	S	-	-	-	Protein of unknown function, DUF600
PIBGAFCF_03562	1.69e-257	-	-	-	L	ko:K21487	-	ko00000,ko01000,ko02048	nucleic acid phosphodiester bond hydrolysis
PIBGAFCF_03563	6.14e-152	-	-	-	L	ko:K21487	-	ko00000,ko01000,ko02048	Belongs to the WXG100 family
PIBGAFCF_03564	4.43e-162	yeeN	-	-	K	-	-	-	transcriptional regulatory protein
PIBGAFCF_03566	2.48e-138	aadK	-	-	G	ko:K05593	-	ko00000,ko01000,ko01504	Streptomycin adenylyltransferase
PIBGAFCF_03567	1.32e-60	cotJA	-	-	S	ko:K06332	-	ko00000	Spore coat associated protein JA (CotJA)
PIBGAFCF_03568	1.34e-60	cotJB	-	-	S	ko:K06333	-	ko00000	CotJB protein
PIBGAFCF_03569	4.26e-133	cotJC	-	-	P	ko:K06334	-	ko00000	Spore Coat
PIBGAFCF_03570	1.38e-114	yesJ	-	-	K	-	-	-	Acetyltransferase (GNAT) family
PIBGAFCF_03572	1.26e-147	yetF	-	-	S	-	-	-	membrane
PIBGAFCF_03573	3.06e-70	yetG	1.14.99.48	-	S	ko:K07145	ko00860,ko01110,map00860,map01110	ko00000,ko00001,ko01000	Antibiotic biosynthesis monooxygenase
PIBGAFCF_03574	2.87e-82	yetH	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PIBGAFCF_03575	2.4e-185	-	-	-	T	ko:K17763	-	ko00000,ko03021	COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PIBGAFCF_03576	7.84e-29	-	-	-	S	-	-	-	Uncharacterized small protein (DUF2292)
PIBGAFCF_03577	2.59e-73	-	-	-	H	-	-	-	riboflavin kinase activity
PIBGAFCF_03578	5.15e-135	yetJ	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
PIBGAFCF_03579	3.05e-110	yetL	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
PIBGAFCF_03580	3.35e-246	yetM	-	-	CH	-	-	-	FAD binding domain
PIBGAFCF_03581	2.78e-251	yetN	-	-	S	-	-	-	Protein of unknown function (DUF3900)
PIBGAFCF_03582	0.0	cypD	1.14.14.1, 1.6.2.4	-	C	ko:K14338	ko00071,ko00380,ko00627,ko01120,map00071,map00380,map00627,map01120	ko00000,ko00001,ko00199,ko01000	Belongs to the cytochrome P450 family
PIBGAFCF_03584	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Belongs to the LTA synthase family
PIBGAFCF_03585	1.4e-186	yfnH	2.7.7.33	-	JM	ko:K00978	ko00500,ko00520,ko01100,map00500,map00520,map01100	ko00000,ko00001,ko01000	Nucleotidyl transferase
PIBGAFCF_03586	5.59e-219	yfnG	4.2.1.45, 4.2.1.46	-	M	ko:K01709,ko:K01710	ko00520,ko00521,ko00523,ko00525,ko01055,ko01130,map00520,map00521,map00523,map00525,map01055,map01130	ko00000,ko00001,ko00002,ko01000	dehydratase
PIBGAFCF_03587	7.97e-222	yfnF	-	-	M	-	-	-	Nucleotide-diphospho-sugar transferase
PIBGAFCF_03588	3.25e-272	yfnE	-	-	S	-	-	-	Glycosyltransferase like family 2
PIBGAFCF_03589	5.43e-227	yfnD	-	-	M	-	-	-	Nucleotide-diphospho-sugar transferase
PIBGAFCF_03590	4.78e-272	fsr	-	-	P	ko:K08223	-	ko00000,ko02000	COG0477 Permeases of the major facilitator superfamily
PIBGAFCF_03591	2.1e-306	yfnA	-	-	E	ko:K03294	-	ko00000	amino acid
PIBGAFCF_03592	0.0	yfmT	1.2.1.3, 1.2.1.67	-	C	ko:K00128,ko:K21802	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00627,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00627,map00903,map00981,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PIBGAFCF_03593	3.69e-165	yfmS	-	-	NT	-	-	-	chemotaxis protein
PIBGAFCF_03594	1.93e-211	yhxD	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
PIBGAFCF_03595	4.84e-256	-	-	-	M	-	-	-	COG0463 Glycosyltransferases involved in cell wall biogenesis
PIBGAFCF_03596	0.0	yfmR	-	-	S	ko:K15738	-	ko00000,ko02000	COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PIBGAFCF_03597	8.36e-89	yfmP	-	-	K	ko:K21902	-	ko00000,ko03000	transcriptional
PIBGAFCF_03598	6.17e-249	yfmO	-	-	EGP	ko:K08221	-	ko00000,ko02000	Major facilitator superfamily
PIBGAFCF_03599	0.0	yheS_1	-	-	S	-	-	-	COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PIBGAFCF_03600	2.32e-260	yfmL	-	-	L	-	-	-	COG0513 Superfamily II DNA and RNA helicases
PIBGAFCF_03601	3.25e-64	yfmJ	-	-	S	ko:K07119	-	ko00000	N-terminal domain of oxidoreductase
PIBGAFCF_03602	1.41e-99	yfmJ	-	-	S	ko:K07119	-	ko00000	N-terminal domain of oxidoreductase
PIBGAFCF_03603	9.03e-33	-	-	-	S	-	-	-	Protein of unknown function (DUF3212)
PIBGAFCF_03604	4.9e-76	yflT	-	-	S	-	-	-	Heat induced stress protein YflT
PIBGAFCF_03605	5.26e-298	pel	4.2.2.2	-	G	ko:K01728	ko00040,ko02024,map00040,map02024	ko00000,ko00001,ko01000	Pectate lyase
PIBGAFCF_03606	0.0	yflS	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
PIBGAFCF_03611	3.08e-92	M1-820	-	-	Q	-	-	-	Collagen triple helix repeat (20 copies)
PIBGAFCF_03612	0.0	ywpD	-	-	T	-	-	-	Histidine kinase
PIBGAFCF_03613	1.26e-245	lytH	-	-	M	ko:K21472	-	ko00000,ko01000,ko01002,ko01011	Peptidase, M23
PIBGAFCF_03614	3.92e-215	lipA	2.8.1.8	-	H	ko:K03644	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
PIBGAFCF_03615	3.06e-61	yutD	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_03616	3e-93	yutE	-	-	S	-	-	-	Protein of unknown function DUF86
PIBGAFCF_03617	1.18e-179	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PIBGAFCF_03618	4.38e-108	yutG	3.1.3.27	-	I	ko:K01095	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	COG1267 Phosphatidylglycerophosphatase A and related proteins
PIBGAFCF_03619	5.56e-244	yutH	-	-	S	-	-	-	Spore coat protein
PIBGAFCF_03620	1.6e-305	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
PIBGAFCF_03621	3.65e-248	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
PIBGAFCF_03622	2.22e-206	thrB	2.7.1.39	-	E	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PIBGAFCF_03623	0.0	yuxL	3.4.19.1	-	EU	ko:K01303	-	ko00000,ko01000,ko01002	peptidase
PIBGAFCF_03624	1.26e-47	yutI	-	-	O	-	-	-	COG0694 Thioredoxin-like proteins and domains
PIBGAFCF_03625	2.61e-70	yuzD	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_03626	7.79e-262	yutJ	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
PIBGAFCF_03627	4.81e-50	yuzB	-	-	S	-	-	-	Belongs to the UPF0349 family
PIBGAFCF_03628	2.57e-272	yutK	-	-	F	ko:K03317	-	ko00000	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
PIBGAFCF_03629	1.46e-203	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PIBGAFCF_03630	1.88e-80	erpA	-	-	S	ko:K13628	-	ko00000,ko03016	Belongs to the HesB IscA family
PIBGAFCF_03631	6e-167	dltE	-	-	M	ko:K14189	-	ko00000,ko01000	Belongs to the short-chain dehydrogenases reductases (SDR) family
PIBGAFCF_03632	5.08e-55	yjcK	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Alanine acetyltransferase
PIBGAFCF_03634	1.77e-42	-	-	-	S	-	-	-	Bacteriocin class IId cyclical uberolysin-like
PIBGAFCF_03636	1.41e-151	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
PIBGAFCF_03637	1.09e-86	-	-	-	CP	-	-	-	Membrane
PIBGAFCF_03638	1.57e-37	-	-	-	-	-	-	-	-
PIBGAFCF_03639	1.29e-234	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PIBGAFCF_03641	1.15e-235	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	reductase
PIBGAFCF_03642	3.83e-297	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
PIBGAFCF_03643	1.21e-45	yuiB	-	-	S	-	-	-	Putative membrane protein
PIBGAFCF_03644	2.23e-149	yuiC	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_03645	1.37e-98	yuiD	-	-	S	ko:K09775	-	ko00000	protein conserved in bacteria
PIBGAFCF_03646	0.0	pepA	3.4.11.1	-	E	ko:K01255	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
PIBGAFCF_03647	1.11e-273	yuiF	-	-	S	ko:K07084	-	ko00000,ko02000	antiporter
PIBGAFCF_03648	4.35e-130	bioY	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Biotin biosynthesis protein
PIBGAFCF_03649	1.8e-152	yuiH	-	-	S	-	-	-	Oxidoreductase molybdopterin binding domain
PIBGAFCF_03650	2.31e-198	eSD	-	-	S	ko:K07017	-	ko00000	Putative esterase
PIBGAFCF_03651	5.34e-166	dhbA	1.3.1.28	-	IQ	ko:K00216	ko01053,ko01110,ko01130,map01053,map01110,map01130	ko00000,ko00001,ko01000	Belongs to the short-chain dehydrogenases reductases (SDR) family
PIBGAFCF_03652	7.09e-273	dhbC	5.4.4.2	-	HQ	ko:K02361	ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Isochorismate synthase
PIBGAFCF_03653	0.0	entE	2.7.7.58, 6.3.2.14	-	Q	ko:K02363,ko:K04783	ko01053,ko01110,ko01130,map01053,map01110,map01130	ko00000,ko00001,ko01000,ko01008	2,3-dihydroxybenzoate-AMP ligase
PIBGAFCF_03654	5.68e-208	dhbB	3.3.2.1, 6.3.2.14	-	Q	ko:K01252	ko01053,ko01110,ko01130,map01053,map01110,map01130	ko00000,ko00001,ko01000,ko01008	Isochorismatase family
PIBGAFCF_03655	0.0	dhbF	-	-	Q	ko:K04780	ko01053,map01053	ko00000,ko00001,ko01008	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PIBGAFCF_03656	3.6e-42	mbtH	-	-	S	ko:K05375	ko00261,ko01130,map00261,map01130	ko00000,ko00001,ko00002	MbtH-like protein
PIBGAFCF_03657	2.71e-165	yukJ	-	-	S	-	-	-	Uncharacterized conserved protein (DUF2278)
PIBGAFCF_03658	9.05e-258	ald	1.4.1.1	-	E	ko:K00259	ko00250,ko00430,ko01100,map00250,map00430,map01100	ko00000,ko00001,ko01000	Belongs to the AlaDH PNT family
PIBGAFCF_03659	1.66e-288	yukF	-	-	QT	-	-	-	Transcriptional regulator
PIBGAFCF_03660	1.94e-60	yukE	-	-	S	-	-	-	Belongs to the WXG100 family
PIBGAFCF_03661	8.78e-52	yukD	-	-	S	-	-	-	WXG100 protein secretion system (Wss), protein YukD
PIBGAFCF_03662	2.45e-261	essB	-	-	S	-	-	-	WXG100 protein secretion system (Wss), protein YukC
PIBGAFCF_03663	0.0	essC	-	-	D	ko:K03466	-	ko00000,ko03036	COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
PIBGAFCF_03664	0.0	yueB	-	-	S	-	-	-	type VII secretion protein EsaA
PIBGAFCF_03665	4.27e-97	yueC	-	-	S	-	-	-	Family of unknown function (DUF5383)
PIBGAFCF_03666	2.35e-159	yueD	1.1.1.320	-	IQ	ko:K16216	-	ko00000,ko01000	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PIBGAFCF_03667	1.83e-123	yueE	-	-	S	ko:K06950	-	ko00000	phosphohydrolase
PIBGAFCF_03668	1.98e-31	-	-	-	S	-	-	-	Protein of unknown function (DUF2642)
PIBGAFCF_03669	2.31e-232	yueF	-	-	S	-	-	-	transporter activity
PIBGAFCF_03670	4.3e-44	yueG	-	-	S	ko:K06299	-	ko00000	Spore germination protein gerPA/gerPF
PIBGAFCF_03671	1.1e-50	yueH	-	-	S	-	-	-	YueH-like protein
PIBGAFCF_03672	4.96e-86	yueI	-	-	S	-	-	-	Protein of unknown function (DUF1694)
PIBGAFCF_03673	4.46e-132	pncA	-	-	Q	ko:K16788	-	ko00000,ko02000	COG1335 Amidases related to nicotinamidase
PIBGAFCF_03674	0.0	pncB	6.3.4.21	-	H	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PIBGAFCF_03675	1.12e-285	yuxH	-	-	T	-	-	-	signal transduction protein containing EAL and modified HD-GYP domains
PIBGAFCF_03676	1.59e-62	yuzC	-	-	-	-	-	-	-
PIBGAFCF_03677	1.87e-11	-	-	-	S	-	-	-	DegQ (SacQ) family
PIBGAFCF_03678	5.91e-78	comQ	-	-	H	ko:K02251	ko02024,map02024	ko00000,ko00001,ko02044	Belongs to the FPP GGPP synthase family
PIBGAFCF_03680	2.08e-208	ygxA	-	-	S	-	-	-	Nucleotidyltransferase-like
PIBGAFCF_03681	1.1e-73	ygzB	-	-	S	-	-	-	UPF0295 protein
PIBGAFCF_03682	6.8e-104	perR	-	-	P	ko:K09825	-	ko00000,ko03000	Belongs to the Fur family
PIBGAFCF_03683	7.73e-109	bcp	1.11.1.15	-	O	ko:K03564	-	ko00000,ko01000	Peroxiredoxin
PIBGAFCF_03684	1.27e-309	gsaB	5.4.3.8	-	H	ko:K01845	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Glutamate-1-semialdehyde aminotransferase
PIBGAFCF_03685	1.76e-237	ygaE	-	-	S	-	-	-	Membrane
PIBGAFCF_03686	0.0	ygaD	-	-	V	ko:K11085	ko02010,map02010	ko00000,ko00001,ko01000,ko02000	ABC transporter
PIBGAFCF_03687	2.32e-135	ygaC	-	-	J	ko:K07586	-	ko00000	Belongs to the UPF0374 family
PIBGAFCF_03688	1.4e-49	ygaB	-	-	S	-	-	-	YgaB-like protein
PIBGAFCF_03689	9.58e-06	sspE	-	-	S	ko:K06422	-	ko00000	Small, acid-soluble spore protein, gamma-type
PIBGAFCF_03690	2.02e-168	fabL	1.3.1.104	-	IQ	ko:K10780	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PIBGAFCF_03691	1.47e-49	yfhS	-	-	-	-	-	-	-
PIBGAFCF_03692	3.84e-258	mutY	-	-	L	ko:K03575	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	A G-specific
PIBGAFCF_03693	4.29e-229	yfhP	-	-	S	ko:K07038	-	ko00000	membrane-bound metal-dependent
PIBGAFCF_03694	0.0	yfhO	-	-	S	-	-	-	Bacterial membrane protein YfhO
PIBGAFCF_03695	1.29e-234	csbB	-	GT2	M	ko:K20534	-	ko00000,ko01000,ko01005,ko02000	COG0463 Glycosyltransferases involved in cell wall biogenesis
PIBGAFCF_03696	5.37e-156	-	-	-	S	-	-	-	Alpha/beta hydrolase family
PIBGAFCF_03697	1.7e-47	yfhL	-	-	S	-	-	-	SdpI/YhfL protein family
PIBGAFCF_03698	2.3e-112	yfhK	-	-	T	-	-	-	Bacterial SH3 domain homologues
PIBGAFCF_03699	1.49e-58	yfhJ	-	-	S	-	-	-	WVELL protein
PIBGAFCF_03700	6.62e-203	mpr	-	-	M	-	-	-	Belongs to the peptidase S1B family
PIBGAFCF_03702	6.7e-231	yfhI	-	-	EGP	-	-	-	-transporter
PIBGAFCF_03703	3.93e-61	yfhH	-	-	S	-	-	-	Protein of unknown function (DUF1811)
PIBGAFCF_03704	1.95e-177	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Modulates RecA activity
PIBGAFCF_03705	3.2e-210	yfhF	-	-	S	ko:K07071	-	ko00000	nucleoside-diphosphate sugar epimerase
PIBGAFCF_03707	6.01e-33	yfhD	-	-	S	-	-	-	YfhD-like protein
PIBGAFCF_03708	3.09e-133	yfhC	-	-	C	-	-	-	nitroreductase
PIBGAFCF_03709	1.27e-193	yfhB	-	-	S	-	-	-	PhzF family
PIBGAFCF_03710	0.0	mprF	2.3.2.3	-	S	ko:K14205	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PIBGAFCF_03711	2.11e-103	yfiV	-	-	K	-	-	-	transcriptional
PIBGAFCF_03712	0.0	yfiU	-	-	EGP	-	-	-	the major facilitator superfamily
PIBGAFCF_03713	2.04e-122	yfiT	-	-	S	-	-	-	Belongs to the metal hydrolase YfiT family
PIBGAFCF_03714	1.37e-59	yrdF	-	-	K	ko:K03623	-	ko00000	ribonuclease inhibitor
PIBGAFCF_03715	2.39e-223	yfiQ	-	-	G	ko:K21462	-	ko00000	COG3936 Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
PIBGAFCF_03716	1.83e-128	-	1.6.5.2	-	S	ko:K00355	ko00130,ko01110,ko05200,ko05225,ko05418,map00130,map01110,map05200,map05225,map05418	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
PIBGAFCF_03717	1e-119	padR	-	-	K	-	-	-	transcriptional
PIBGAFCF_03718	1.49e-89	ctaB	2.5.1.141	-	O	ko:K02257	ko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714	ko00000,ko00001,ko00002,ko01000,ko01006,ko03029	Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group
PIBGAFCF_03719	2.12e-99	ctaB	2.5.1.141	-	O	ko:K02257	ko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714	ko00000,ko00001,ko00002,ko01000,ko01006,ko03029	Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group
PIBGAFCF_03720	4.18e-196	yfiE	1.13.11.2	-	S	ko:K07104	ko00361,ko00362,ko00622,ko00643,ko01100,ko01120,ko01220,map00361,map00362,map00622,map00643,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	glyoxalase
PIBGAFCF_03721	7.86e-82	yfiD3	-	-	S	-	-	-	DoxX
PIBGAFCF_03722	0.0	yfiC3	-	-	V	ko:K06147	-	ko00000,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
PIBGAFCF_03723	0.0	yfiB3	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
PIBGAFCF_03724	0.0	-	-	-	M	-	-	-	Peptidase_G2, IMC autoproteolytic cleavage domain
PIBGAFCF_03725	0.0	glvC	2.7.1.208	-	G	ko:K02749,ko:K02750	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PIBGAFCF_03726	3.67e-177	glvR	-	-	F	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
PIBGAFCF_03727	0.0	malH	3.2.1.122	GH4	G	ko:K01232	ko00500,map00500	ko00000,ko00001,ko01000	COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
PIBGAFCF_03728	3.29e-22	sspH	-	-	S	ko:K06425	-	ko00000	Belongs to the SspH family
PIBGAFCF_03729	0.0	acoR	-	-	KQ	ko:K21405	-	ko00000,ko03000	COG3284 Transcriptional activator of acetoin glycerol metabolism
PIBGAFCF_03730	3.32e-302	acoL	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
PIBGAFCF_03731	7.82e-265	acoC	2.3.1.12	-	C	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PIBGAFCF_03732	9.85e-238	acoB	-	-	C	ko:K21417	-	ko00000,ko01000	COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
PIBGAFCF_03733	2.95e-239	acoA	-	-	C	ko:K21416	-	ko00000,ko01000	COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
PIBGAFCF_03734	2.86e-102	yfjM	-	-	S	-	-	-	Psort location Cytoplasmic, score
PIBGAFCF_03735	7.85e-241	yfjN	-	-	J	-	-	-	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PIBGAFCF_03736	1.83e-60	-	-	-	S	-	-	-	YfzA-like protein
PIBGAFCF_03744	0.0	-	-	-	KLT	-	-	-	Protein kinase domain
PIBGAFCF_03745	7.56e-305	lmrA	3.6.3.44	-	V	ko:K02021,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter
PIBGAFCF_03746	3.05e-93	-	-	-	O	ko:K20486	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko01000,ko01002	Subtilase family
PIBGAFCF_03747	0.0	dtpT	-	-	E	ko:K03305	-	ko00000	amino acid peptide transporter
PIBGAFCF_03748	0.0	yclG	-	-	M	-	-	-	Pectate lyase superfamily protein
PIBGAFCF_03750	0.0	gerKA	-	-	EG	ko:K06295	-	ko00000	Spore germination protein
PIBGAFCF_03751	6.53e-290	gerKC	-	-	S	ko:K06297	-	ko00000	spore germination
PIBGAFCF_03752	5.7e-243	gerKB	-	-	F	ko:K06296	-	ko00000,ko02000	Spore germination protein
PIBGAFCF_03753	8.5e-316	yxeK	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PIBGAFCF_03754	2.47e-117	yxeL	-	-	K	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PIBGAFCF_03755	2.27e-176	yxeM	-	-	M	ko:K16961	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 3 family
PIBGAFCF_03756	1.22e-147	yxeN	-	-	P	ko:K10009,ko:K16962	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0765 ABC-type amino acid transport system, permease component
PIBGAFCF_03757	4.6e-169	yxeO	-	-	P	ko:K16960,ko:K16963	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PIBGAFCF_03758	7.36e-272	yxeP	-	-	E	ko:K21613	-	ko00000,ko01000,ko01002	hydrolase activity
PIBGAFCF_03759	1.72e-303	yxeQ	-	-	S	-	-	-	MmgE/PrpD family
PIBGAFCF_03760	1.23e-153	yclH	-	-	P	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
PIBGAFCF_03761	4.84e-300	yclI	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter (permease) YclI
PIBGAFCF_03762	2.5e-162	yclJ	-	-	T	ko:K02483	-	ko00000,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PIBGAFCF_03763	0.0	yclK	-	-	T	-	-	-	COG0642 Signal transduction histidine kinase
PIBGAFCF_03764	4.37e-97	rapA1	-	-	S	ko:K06359,ko:K06361	ko02024,map02024	ko00000,ko00001,ko01000	aspartate phosphatase
PIBGAFCF_03767	1.28e-315	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
PIBGAFCF_03768	1.06e-208	yclN	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PIBGAFCF_03769	1.4e-212	yclO	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PIBGAFCF_03770	1.55e-173	yclP	3.6.3.34	-	P	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
PIBGAFCF_03771	1.67e-220	yclQ	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG4607 ABC-type enterochelin transport system, periplasmic component
PIBGAFCF_03772	1.98e-313	ycnB	-	-	EGP	-	-	-	the major facilitator superfamily
PIBGAFCF_03773	4.78e-192	ycnC	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_03774	2.68e-172	-	1.5.1.39	-	C	ko:K10678,ko:K19286	ko00633,ko00740,ko01100,ko01120,map00633,map00740,map01100,map01120	ko00000,ko00001,ko01000	Nitroreductase family
PIBGAFCF_03775	2.79e-59	ycnE	-	-	S	-	-	-	Monooxygenase
PIBGAFCF_03776	2.56e-66	yczG	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
PIBGAFCF_03777	0.0	gabR	-	-	K	ko:K00375	-	ko00000,ko03000	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PIBGAFCF_03778	2.59e-279	gabT	2.6.1.19, 2.6.1.22	-	E	ko:K00823,ko:K07250	ko00250,ko00280,ko00410,ko00640,ko00650,ko01100,ko01120,map00250,map00280,map00410,map00640,map00650,map01100,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PIBGAFCF_03779	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PIBGAFCF_03780	3.93e-189	glcU	-	-	U	ko:K05340	-	ko00000,ko02000	Glucose uptake
PIBGAFCF_03781	1.82e-181	gdh	1.1.1.47	-	IQ	ko:K00034	ko00030,ko01120,ko01200,map00030,map01120,map01200	ko00000,ko00001,ko01000	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PIBGAFCF_03782	6.58e-128	ycnI	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_03783	0.0	ycnJ	-	-	P	ko:K14166	-	ko00000,ko02000	protein, homolog of Cu resistance protein CopC
PIBGAFCF_03784	1.15e-135	ycnK	-	-	K	ko:K21601	-	ko00000,ko03000	COG1349 Transcriptional regulators of sugar metabolism
PIBGAFCF_03785	2.18e-69	-	-	-	-	-	-	-	-
PIBGAFCF_03786	0.0	mtlA	2.7.1.197	-	G	ko:K02799,ko:K02800	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG2213 Phosphotransferase system, mannitol-specific IIBC component
PIBGAFCF_03787	1.96e-93	mtlF	2.7.1.197	-	G	ko:K02798	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG4668 Mannitol fructose-specific phosphotransferase system, IIA domain
PIBGAFCF_03788	2.79e-255	mtlD	1.1.1.17	-	G	ko:K00009	ko00051,map00051	ko00000,ko00001,ko01000	COG0246 Mannitol-1-phosphate altronate dehydrogenases
PIBGAFCF_03789	4.09e-78	ycsD	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	FabA-like domain
PIBGAFCF_03791	2.59e-175	ycsE	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sucrose-6F-phosphate phosphohydrolase
PIBGAFCF_03792	1.66e-169	ycsF	-	-	S	ko:K07160	-	ko00000	Belongs to the UPF0271 (lamB) family
PIBGAFCF_03793	2.33e-265	ycsG	-	-	P	-	-	-	COG1914 Mn2 and Fe2 transporters of the NRAMP family
PIBGAFCF_03794	7.99e-182	ycsI	-	-	S	-	-	-	Belongs to the D-glutamate cyclase family
PIBGAFCF_03795	1.75e-170	kipI	-	-	E	ko:K06351	-	ko00000	Allophanate hydrolase subunit 1
PIBGAFCF_03796	1.09e-227	kipA	-	-	E	ko:K06350	-	ko00000	Allophanate hydrolase subunit 2
PIBGAFCF_03797	2.47e-162	kipR	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_03798	1.97e-143	ycsK	-	-	E	-	-	-	anatomical structure formation involved in morphogenesis
PIBGAFCF_03800	2.73e-71	yczJ	-	-	S	-	-	-	biosynthesis
PIBGAFCF_03801	0.0	pbpC	3.4.16.4	-	M	ko:K02545,ko:K21467	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko00002,ko01000,ko01011,ko01504	Penicillin-binding Protein
PIBGAFCF_03802	1.53e-213	ycsN	-	-	S	-	-	-	Oxidoreductase
PIBGAFCF_03803	0.0	mtlR	-	-	K	ko:K03483	-	ko00000,ko03000	transcriptional regulator, MtlR
PIBGAFCF_03804	0.0	ydaB	-	-	IQ	-	-	-	acyl-CoA ligase
PIBGAFCF_03805	2.17e-195	ydaD	-	-	IQ	-	-	-	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PIBGAFCF_03806	3.59e-118	ydaE	5.3.1.15	-	S	ko:K09988	ko00040,map00040	ko00000,ko00001,ko01000	Cupin 2, conserved barrel domain protein
PIBGAFCF_03807	1.58e-146	ydaF	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
PIBGAFCF_03808	4.32e-100	ydaG	-	-	S	-	-	-	general stress protein
PIBGAFCF_03809	9.89e-174	amj	-	-	U	-	-	-	Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane
PIBGAFCF_03810	2.67e-62	ydzA	-	-	EGP	-	-	-	Domain of unknown function (DUF3817)
PIBGAFCF_03811	3.25e-97	lrpC	-	-	K	ko:K03719	-	ko00000,ko03000,ko03036	Transcriptional regulator
PIBGAFCF_03812	0.0	topB	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PIBGAFCF_03813	7.77e-240	ydaJ	-	-	M	-	-	-	Belongs to the glycosyl hydrolase 8 (cellulase D) family
PIBGAFCF_03814	4.73e-183	ydaK	-	-	T	-	-	-	Diguanylate cyclase, GGDEF domain
PIBGAFCF_03815	0.0	ydaL	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2334)
PIBGAFCF_03816	1.08e-188	ydaM	-	-	M	-	-	-	Glycosyl transferase family group 2
PIBGAFCF_03817	0.0	ydaN	-	-	S	-	-	-	Bacterial cellulose synthase subunit
PIBGAFCF_03818	0.0	ydaO	-	-	E	-	-	-	amino acid
PIBGAFCF_03819	0.0	ydaP	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
PIBGAFCF_03820	5.03e-80	-	-	-	K	-	-	-	acetyltransferase
PIBGAFCF_03822	3.35e-88	yycO	-	-	S	-	-	-	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
PIBGAFCF_03823	1.04e-83	-	-	-	-	-	-	-	-
PIBGAFCF_03824	7.22e-235	-	-	-	S	ko:K06366	ko02024,map02024	ko00000,ko00001,ko01000	Histidine kinase
PIBGAFCF_03825	1.01e-49	-	-	-	S	-	-	-	Domain of unknown function (DUF1874)
PIBGAFCF_03826	0.0	yddE	-	-	S	-	-	-	AAA-like domain
PIBGAFCF_03827	8.78e-96	yddD	-	-	S	-	-	-	TcpE family
PIBGAFCF_03828	2.72e-33	yddC	-	-	-	-	-	-	-
PIBGAFCF_03829	1.41e-162	yddB	-	-	S	-	-	-	Conjugative transposon protein TcpC
PIBGAFCF_03830	5.8e-54	yddA	-	-	-	-	-	-	-
PIBGAFCF_03834	3.25e-232	nicK	-	-	L	ko:K07467	-	ko00000	Replication initiation factor
PIBGAFCF_03835	1.56e-302	ydcQ	-	-	D	ko:K03466	-	ko00000,ko03036	Ftsk spoiiie family protein
PIBGAFCF_03837	1.87e-50	-	-	-	S	-	-	-	Bacterial protein of unknown function (DUF961)
PIBGAFCF_03839	2.18e-34	-	-	-	-	-	-	-	-
PIBGAFCF_03840	4.29e-71	-	-	-	K	-	-	-	Transcriptional
PIBGAFCF_03841	9.84e-80	-	-	-	E	-	-	-	Pfam:DUF955
PIBGAFCF_03842	3.44e-180	ydcL	-	-	L	-	-	-	Belongs to the 'phage' integrase family
PIBGAFCF_03843	6.4e-31	-	-	-	S	-	-	-	YesK-like protein
PIBGAFCF_03846	4.65e-40	yvrI	-	-	K	ko:K03093	-	ko00000,ko03021	RNA polymerase
PIBGAFCF_03850	4.24e-62	cwlC	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	n-acetylmuramoyl-L-alanine amidase
PIBGAFCF_03851	5.14e-10	-	-	-	S	-	-	-	YvrJ protein family
PIBGAFCF_03859	3.37e-73	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
PIBGAFCF_03860	1.78e-21	-	-	-	-	-	-	-	-
PIBGAFCF_03861	0.0	tex	-	-	K	ko:K06959	-	ko00000	COG2183 Transcriptional accessory protein
PIBGAFCF_03862	3.58e-135	rsbX	3.1.3.3	-	KT	ko:K05518	-	ko00000,ko01000,ko03021	Sigma factor PP2C-like phosphatases
PIBGAFCF_03863	2.67e-179	sigB	-	-	K	ko:K03090	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PIBGAFCF_03864	6.83e-109	rsbW	2.7.11.1	-	F	ko:K04757	-	ko00000,ko01000,ko01001,ko03021	Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B)
PIBGAFCF_03865	3.28e-69	rsbV	-	-	T	ko:K04749	-	ko00000,ko03021	Belongs to the anti-sigma-factor antagonist family
PIBGAFCF_03866	4.02e-238	rsbU	3.1.3.3	-	KT	ko:K07315	-	ko00000,ko01000,ko03021	phosphatase
PIBGAFCF_03867	5.79e-88	rsbT	2.7.11.1	-	T	ko:K17752	-	ko00000,ko01000,ko01001,ko03021	COG2172 Anti-sigma regulatory factor (Ser Thr protein kinase)
PIBGAFCF_03868	3.11e-75	rsbS	-	-	T	ko:K17762	-	ko00000,ko03021	antagonist
PIBGAFCF_03869	9.89e-176	rsbR	-	-	T	ko:K17763	-	ko00000,ko03021	Positive regulator of sigma-B
PIBGAFCF_03870	4.34e-75	ndoA	-	-	L	ko:K07171	-	ko00000,ko01000,ko02048	Toxic component of a toxin-antitoxin (TA) module
PIBGAFCF_03871	6.68e-57	ndoAI	-	-	K	ko:K07723	-	ko00000,ko02048,ko03000	transcriptional regulators containing the CopG Arc MetJ DNA-binding domain and a metal-binding domain
PIBGAFCF_03872	3.01e-274	alr	5.1.1.1, 5.1.1.5	-	E	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PIBGAFCF_03873	1.18e-230	ydcC	-	-	M	-	-	-	COG2834 Outer membrane lipoprotein-sorting protein
PIBGAFCF_03874	7.05e-72	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PIBGAFCF_03875	8.15e-136	ydcA	-	-	S	-	-	-	membrane protein (homolog of Drosophila rhomboid)
PIBGAFCF_03876	0.0	ydbT	-	-	S	ko:K08981	-	ko00000	Membrane
PIBGAFCF_03877	6.7e-93	ydbS	-	-	S	ko:K09167	-	ko00000	Bacterial PH domain
PIBGAFCF_03878	0.0	cshA	3.6.4.13	-	JKL	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PIBGAFCF_03879	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PIBGAFCF_03880	7.23e-257	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
PIBGAFCF_03881	2.25e-74	ydbP	-	-	CO	-	-	-	Thioredoxin
PIBGAFCF_03882	1.34e-158	yeaB	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PIBGAFCF_03883	6.11e-15	-	-	-	S	-	-	-	Fur-regulated basic protein A
PIBGAFCF_03884	2.36e-17	-	-	-	S	-	-	-	Fur-regulated basic protein B
PIBGAFCF_03885	7.84e-256	ydbM	-	-	I	-	-	-	acyl-CoA dehydrogenase
PIBGAFCF_03886	1.32e-69	ydbL	-	-	-	-	-	-	-
PIBGAFCF_03887	5.5e-164	ydbK	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
PIBGAFCF_03888	1.79e-216	ydbJ	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
PIBGAFCF_03889	1.85e-225	ydbI	-	-	S	-	-	-	AI-2E family transporter
PIBGAFCF_03890	1.4e-218	dctA	-	-	U	ko:K03309,ko:K11102,ko:K11103	ko02020,map02020	ko00000,ko00001,ko02000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PIBGAFCF_03891	8.46e-36	dctA	-	-	U	ko:K03309,ko:K11102,ko:K11103	ko02020,map02020	ko00000,ko00001,ko02000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PIBGAFCF_03892	2.66e-146	dctR	-	-	T	ko:K02475,ko:K11692	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG4565 Response regulator of citrate malate metabolism
PIBGAFCF_03893	4.81e-195	dctS	2.7.13.3	-	T	ko:K11614,ko:K11637,ko:K11691	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Signal transduction histidine kinase regulating citrate malate metabolism
PIBGAFCF_03894	2.87e-157	dctS	2.7.13.3	-	T	ko:K11614,ko:K11637,ko:K11691	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Signal transduction histidine kinase regulating citrate malate metabolism
PIBGAFCF_03895	2.07e-171	dctB	-	-	G	-	-	-	COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component
PIBGAFCF_03896	8.49e-52	dctB	-	-	G	-	-	-	COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component
PIBGAFCF_03897	2.61e-196	ydbD	-	-	P	ko:K07217	-	ko00000	Catalase
PIBGAFCF_03898	6.59e-76	ydbC	-	-	S	-	-	-	Domain of unknown function (DUF4937
PIBGAFCF_03899	1.04e-75	ydbB	-	-	G	-	-	-	Cupin domain
PIBGAFCF_03900	9.56e-08	gsiB	-	-	S	ko:K06884	-	ko00000	general stress protein
PIBGAFCF_03901	6.45e-174	ydbA	-	-	P	-	-	-	EcsC protein family
PIBGAFCF_03902	1.7e-64	yvaE	-	-	P	ko:K03297	-	ko00000,ko02000	Small Multidrug Resistance protein
PIBGAFCF_03903	2.74e-96	yvaD	-	-	S	-	-	-	Family of unknown function (DUF5360)
PIBGAFCF_03904	4.61e-44	ydaT	-	-	-	-	-	-	-
PIBGAFCF_03907	1.47e-285	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
PIBGAFCF_03908	1.06e-53	-	-	-	-	-	-	-	-
PIBGAFCF_03912	4.86e-313	iolT	-	-	U	ko:K02100,ko:K06609	-	ko00000,ko02000	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PIBGAFCF_03913	7.98e-228	yhfP	1.1.1.1	-	C	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Quinone oxidoreductase
PIBGAFCF_03914	2.82e-110	yndB	-	-	S	-	-	-	Activator of Hsp90 ATPase homolog 1-like protein
PIBGAFCF_03915	4.74e-209	ydhU	-	-	P	ko:K07217	-	ko00000	Catalase
PIBGAFCF_03916	2.07e-237	ybeC	-	-	E	-	-	-	amino acid
PIBGAFCF_03917	1.04e-86	ybeC	-	-	E	-	-	-	amino acid
PIBGAFCF_03918	1.07e-128	yvdT_1	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_03919	4.14e-63	yvdS	-	-	P	ko:K18924	-	ko00000,ko00002,ko02000	Small Multidrug Resistance protein
PIBGAFCF_03920	1.02e-38	yvdR	-	-	P	ko:K11741	-	ko00000,ko02000	Small Multidrug Resistance protein
PIBGAFCF_03921	1.35e-264	yycB1	-	-	P	ko:K03449	-	ko00000,ko02000	COG2807 Cyanate permease
PIBGAFCF_03922	1.12e-145	-	-	-	K	ko:K05799	-	ko00000,ko03000	FCD
PIBGAFCF_03923	3.82e-167	ydhQ	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA
PIBGAFCF_03924	1.24e-244	ydhL	-	-	EGP	ko:K18567	-	ko00000,ko02000	COG2814 Arabinose efflux permease
PIBGAFCF_03925	5.02e-127	ydhK	-	-	M	-	-	-	Protein of unknown function (DUF1541)
PIBGAFCF_03927	3.98e-311	pbpE	-	-	V	-	-	-	Beta-lactamase
PIBGAFCF_03929	1.11e-168	ydhE	-	-	CG	-	-	-	COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase
PIBGAFCF_03930	8.62e-69	ydhE	-	-	CG	-	-	-	COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase
PIBGAFCF_03931	1.47e-144	ydhC	-	-	K	-	-	-	FCD
PIBGAFCF_03932	1.24e-208	ycsA	1.1.1.83, 1.1.1.93, 4.1.1.73	-	CE	ko:K07246	ko00630,ko00650,map00630,map00650	ko00000,ko00001,ko01000	Tartrate dehydrogenase
PIBGAFCF_03933	4.22e-132	-	3.1.1.24	-	S	ko:K01055	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Alpha/beta hydrolase family
PIBGAFCF_03934	1.15e-138	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
PIBGAFCF_03935	3.72e-184	gmT1	-	-	EG	-	-	-	COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PIBGAFCF_03936	1.6e-181	bltR	-	-	K	-	-	-	helix_turn_helix, mercury resistance
PIBGAFCF_03937	2.15e-99	bltD	2.3.1.57	-	K	ko:K00657	ko00330,ko01100,ko04216,map00330,map01100,map04216	ko00000,ko00001,ko00002,ko01000	FR47-like protein
PIBGAFCF_03938	1.05e-156	ydhB	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
PIBGAFCF_03939	7.19e-197	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
PIBGAFCF_03940	5.7e-281	fabF_1	2.3.1.179	-	I	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PIBGAFCF_03941	4.16e-263	tcaB	-	-	EGP	ko:K07552	-	ko00000,ko02000	-transporter
PIBGAFCF_03942	3.1e-249	gldA	1.1.1.6	-	C	ko:K00005	ko00561,ko00640,ko01100,map00561,map00640,map01100	ko00000,ko00001,ko01000	COG0371 Glycerol dehydrogenase and related enzymes
PIBGAFCF_03943	1.37e-188	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2179)
PIBGAFCF_03944	4.32e-117	ynaD	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
PIBGAFCF_03945	0.0	expZ	-	-	S	ko:K18231	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ABC transporter
PIBGAFCF_03946	3.37e-162	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	Peptidase C26
PIBGAFCF_03947	6.26e-42	ydfJ	-	-	S	ko:K06994,ko:K11625	ko02020,map02020	ko00000,ko00001	drug exporters of the RND superfamily
PIBGAFCF_03948	4.73e-47	yraG	-	-	-	ko:K06440	-	ko00000	-
PIBGAFCF_03949	4.76e-84	yraF	-	-	M	-	-	-	Spore coat protein
PIBGAFCF_03950	2.3e-277	adhB	1.1.1.1, 1.1.1.284	-	E	ko:K00121	ko00010,ko00071,ko00350,ko00625,ko00626,ko00680,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko05204,map00010,map00071,map00350,map00625,map00626,map00680,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01200,map01220,map05204	ko00000,ko00001,ko01000	COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases
PIBGAFCF_03951	4.86e-33	yraE	-	-	-	ko:K06440	-	ko00000	-
PIBGAFCF_03952	1.16e-62	yraD	-	-	M	ko:K06439	-	ko00000	Spore coat protein
PIBGAFCF_03953	4.86e-315	ydeL	-	-	K	ko:K00375	-	ko00000,ko03000	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PIBGAFCF_03954	1.42e-190	ydeK	-	-	EG	-	-	-	-transporter
PIBGAFCF_03955	2.13e-129	ydeS	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_03956	1.41e-239	ydeR	-	-	EGP	-	-	-	Uncharacterised MFS-type transporter YbfB
PIBGAFCF_03957	1.74e-129	paiB	-	-	K	ko:K07734	-	ko00000,ko03000	Transcriptional regulator
PIBGAFCF_03958	5.46e-313	-	-	-	K	ko:K00375	-	ko00000,ko03000	helix_turn_helix gluconate operon transcriptional repressor
PIBGAFCF_03959	6.33e-278	nhaC_1	-	-	C	-	-	-	antiporter
PIBGAFCF_03960	3.59e-78	adhR	-	-	K	ko:K21745	-	ko00000,ko03000	helix_turn_helix, mercury resistance
PIBGAFCF_03961	1.96e-252	adhA	-	-	C	ko:K13979	-	ko00000,ko01000	alcohol dehydrogenase
PIBGAFCF_03962	3.65e-206	-	-	-	S	-	-	-	Sodium Bile acid symporter family
PIBGAFCF_03963	7.14e-63	ydeH	-	-	-	-	-	-	-
PIBGAFCF_03964	1.4e-238	cfr	2.1.1.224	-	J	ko:K15632	-	ko00000,ko01000,ko01504,ko03009	Specifically methylates position 8 of adenine 2503 in 23S rRNA. Confers resistance to some classes of antibiotics
PIBGAFCF_03966	1.73e-186	ydeE	-	-	K	ko:K13653	-	ko00000,ko03000	AraC family transcriptional regulator
PIBGAFCF_03967	1.75e-106	-	-	-	K	ko:K19273	-	ko00000,ko01000,ko01504	Acetyltransferase (GNAT) domain
PIBGAFCF_03968	1.19e-124	yrkC	-	-	G	-	-	-	Cupin domain
PIBGAFCF_03969	3.58e-201	-	-	-	S	-	-	-	SNARE associated Golgi protein
PIBGAFCF_03970	8.48e-196	czcD	-	-	P	ko:K16264	-	ko00000,ko02000	COG1230 Co Zn Cd efflux system component
PIBGAFCF_03971	2.6e-90	-	-	-	E	ko:K07032	-	ko00000	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PIBGAFCF_03972	6.11e-128	yvdP	-	-	C	-	-	-	COG0277 FAD FMN-containing dehydrogenases
PIBGAFCF_03974	5.81e-57	-	-	-	S	-	-	-	Patatin-like phospholipase
PIBGAFCF_03975	1.41e-63	-	-	-	S	-	-	-	Patatin-like phospholipase
PIBGAFCF_03976	3.96e-238	ydeG	-	-	EGP	-	-	-	Major facilitator superfamily
PIBGAFCF_03977	4.32e-298	-	-	-	K	-	-	-	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PIBGAFCF_03978	6.49e-65	-	-	-	K	-	-	-	Transcriptional regulator PadR-like family
PIBGAFCF_03979	1e-131	-	-	-	S	-	-	-	Protein of unknown function (DUF2812)
PIBGAFCF_03980	2.64e-143	racX	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
PIBGAFCF_03981	3.05e-41	cspL	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock
PIBGAFCF_03982	7.03e-123	azoR	-	-	I	ko:K01118	-	ko00000,ko01000	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PIBGAFCF_03983	1.19e-99	-	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_03985	1.85e-59	-	-	-	-	-	-	-	-
PIBGAFCF_03987	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PIBGAFCF_03988	5.07e-201	yfjP	3.2.2.21	-	L	ko:K01247	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
PIBGAFCF_03989	5.27e-235	corA	-	-	P	ko:K03284	-	ko00000,ko02000	Mediates influx of magnesium ions
PIBGAFCF_03991	3.36e-87	yfjR	-	-	I	-	-	-	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
PIBGAFCF_03992	2.14e-56	yfjR	-	-	I	-	-	-	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
PIBGAFCF_03993	4.19e-197	pdaA	-	-	G	ko:K01567	-	ko00000,ko01000	deacetylase
PIBGAFCF_03994	7.99e-37	yfjT	-	-	-	-	-	-	-
PIBGAFCF_03995	9.38e-279	yfkA	-	-	S	-	-	-	YfkB-like domain
PIBGAFCF_03996	5.34e-182	yfkC	-	-	M	-	-	-	Mechanosensitive ion channel
PIBGAFCF_03997	4.99e-180	yfkD	-	-	S	-	-	-	YfkD-like protein
PIBGAFCF_03998	3.14e-234	cax	-	-	P	ko:K07300	-	ko00000,ko02000	COG0387 Ca2 H antiporter
PIBGAFCF_03999	1.55e-273	yfkF	-	-	EGP	-	-	-	COG0477 Permeases of the major facilitator superfamily
PIBGAFCF_04000	8.85e-182	yihY	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
PIBGAFCF_04001	2.71e-63	yfkI	-	-	S	-	-	-	gas vesicle protein
PIBGAFCF_04002	1.38e-102	yfkJ	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PIBGAFCF_04003	7.02e-40	yfkK	-	-	S	-	-	-	Belongs to the UPF0435 family
PIBGAFCF_04004	1.23e-245	-	-	-	EGP	-	-	-	COG0477 Permeases of the major facilitator superfamily
PIBGAFCF_04005	5.75e-165	aroD	4.2.1.10	-	E	ko:K03785	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
PIBGAFCF_04006	1.61e-205	aroE	1.1.1.25	-	E	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PIBGAFCF_04007	2.99e-228	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
PIBGAFCF_04008	7.82e-118	yfkM	3.5.1.124	-	S	ko:K05520	-	ko00000,ko01000,ko01002	protease
PIBGAFCF_04009	0.0	cpdB	3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45	-	F	ko:K01081,ko:K08693,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	COG0737 5'-nucleotidase 2',3'-cyclic phosphodiesterase and related esterases
PIBGAFCF_04010	5.49e-235	yibE	-	-	S	-	-	-	YibE/F-like protein
PIBGAFCF_04011	1.06e-160	yibF	-	-	S	-	-	-	YibE/F-like protein
PIBGAFCF_04012	1.34e-154	frp	-	-	C	-	-	-	nitroreductase
PIBGAFCF_04013	2.03e-162	treR	-	-	K	ko:K03486	-	ko00000,ko03000	transcriptional
PIBGAFCF_04014	0.0	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	COG0366 Glycosidases
PIBGAFCF_04015	1.5e-311	treP	2.7.1.201	-	G	ko:K02818,ko:K02819	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
PIBGAFCF_04016	1.85e-53	ydgB	-	-	S	-	-	-	Spore germination protein gerPA/gerPF
PIBGAFCF_04017	6.73e-51	ydgA	-	-	S	-	-	-	Spore germination protein gerPA/gerPF
PIBGAFCF_04018	2.68e-100	cotP	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
PIBGAFCF_04019	3.87e-80	ydhN1	-	-	S	-	-	-	Domain of unknown function (DUF1992)
PIBGAFCF_04020	0.0	yflE	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Belongs to the LTA synthase family
PIBGAFCF_04021	8.21e-97	yfmQ	-	-	S	-	-	-	Uncharacterised protein from bacillus cereus group
PIBGAFCF_04022	3.41e-313	nagE	2.7.1.193, 2.7.1.199	-	G	ko:K02802,ko:K02803,ko:K02804,ko:K20116,ko:K20117,ko:K20118	ko00010,ko00520,ko02060,map00010,map00520,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG1263 Phosphotransferase system IIC components, glucose maltose N-acetylglucosamine-specific
PIBGAFCF_04023	1.05e-174	yflG	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine aminopeptidase
PIBGAFCF_04024	1.38e-65	yflH	-	-	S	-	-	-	Protein of unknown function (DUF3243)
PIBGAFCF_04025	5.69e-26	yflI	-	-	-	-	-	-	-
PIBGAFCF_04026	5.84e-21	yflJ	-	-	S	-	-	-	Protein of unknown function (DUF2639)
PIBGAFCF_04027	1.9e-153	yflK	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_04028	4.43e-56	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
PIBGAFCF_04029	7.02e-269	nos	1.14.14.47	-	C	ko:K00491	ko00220,ko00330,ko01100,ko01110,map00220,map00330,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
PIBGAFCF_04030	3.39e-183	yflN	-	-	S	-	-	-	COG0491 Zn-dependent hydrolases, including glyoxylases
PIBGAFCF_04031	4.33e-282	citM	-	-	C	ko:K03300,ko:K11639	ko02020,map02020	ko00000,ko00001	Citrate transporter
PIBGAFCF_04032	1.12e-216	yflP	-	-	S	-	-	-	Tripartite tricarboxylate transporter family receptor
PIBGAFCF_04033	1.76e-108	citT	-	-	T	ko:K11638	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
PIBGAFCF_04034	1.92e-182	citS	2.7.13.3	-	T	ko:K11614,ko:K11637,ko:K11691	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Signal transduction histidine kinase regulating citrate malate metabolism
PIBGAFCF_04035	5.91e-148	citS	2.7.13.3	-	T	ko:K11614,ko:K11637,ko:K11691	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Signal transduction histidine kinase regulating citrate malate metabolism
PIBGAFCF_04036	5.54e-104	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
PIBGAFCF_04037	0.0	-	-	-	M	-	-	-	cell wall anchor domain
PIBGAFCF_04038	0.0	-	-	-	M	-	-	-	cell wall anchor domain
PIBGAFCF_04039	4.78e-191	M1-574	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
PIBGAFCF_04044	3.54e-282	-	-	-	M	-	-	-	domain protein
PIBGAFCF_04045	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PIBGAFCF_04046	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PIBGAFCF_04047	6.18e-52	yaaB	-	-	S	-	-	-	Domain of unknown function (DUF370)
PIBGAFCF_04048	1.07e-262	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PIBGAFCF_04049	3.19e-45	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain
PIBGAFCF_04050	2.83e-262	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PIBGAFCF_04051	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PIBGAFCF_04052	1.84e-67	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PIBGAFCF_04053	6.08e-179	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PIBGAFCF_04054	7.08e-137	jag	-	-	S	ko:K06346	-	ko00000	single-stranded nucleic acid binding R3H
PIBGAFCF_04055	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PIBGAFCF_04056	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PIBGAFCF_04057	2.56e-161	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of guanine in position 535 of 16S rRNA
PIBGAFCF_04058	1.1e-193	noc	-	-	D	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division and chromosome segregation by preventing the formation of the Z ring through the nucleoid, which would cause chromosome breakage
PIBGAFCF_04059	2.49e-172	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	COG1192 ATPases involved in chromosome partitioning
PIBGAFCF_04060	2.76e-187	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
PIBGAFCF_04061	1.3e-139	yyaC	-	-	S	-	-	-	Sporulation protein YyaC
PIBGAFCF_04062	2.63e-74	yhhY	-	-	K	-	-	-	FR47-like protein
PIBGAFCF_04063	3.84e-215	yyaD	-	-	S	-	-	-	Membrane
PIBGAFCF_04064	1.82e-45	yyzM	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_04065	0.0	yyaE	-	-	C	-	-	-	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PIBGAFCF_04066	6.32e-253	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PIBGAFCF_04067	3.39e-60	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
PIBGAFCF_04068	1.37e-98	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PIBGAFCF_04069	1.11e-49	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PIBGAFCF_04070	3.59e-123	adaA	-	-	K	ko:K13530	-	ko00000,ko01000,ko03000,ko03400	Transcriptional regulator
PIBGAFCF_04071	6.58e-112	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PIBGAFCF_04072	2.49e-179	exoA	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
PIBGAFCF_04073	6.01e-217	ccpB	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_04074	9.47e-86	yyaH	4.4.1.5	-	E	ko:K01759	ko00620,map00620	ko00000,ko00001,ko01000	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PIBGAFCF_04075	2.8e-311	-	-	-	G	ko:K08369	-	ko00000,ko02000	Sugar (and other) transporter
PIBGAFCF_04076	4.75e-193	yyaK	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
PIBGAFCF_04077	7.39e-264	yyaL	-	-	O	ko:K06888	-	ko00000	COG1331 Highly conserved protein containing a thioredoxin domain
PIBGAFCF_04078	7.1e-207	yyaL	-	-	O	ko:K06888	-	ko00000	COG1331 Highly conserved protein containing a thioredoxin domain
PIBGAFCF_04079	7.25e-88	ynaF	-	-	-	-	-	-	-
PIBGAFCF_04080	3.34e-36	-	-	-	-	-	-	-	-
PIBGAFCF_04081	8.63e-130	-	-	-	S	-	-	-	Alpha/beta hydrolase family
PIBGAFCF_04082	5e-27	-	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
PIBGAFCF_04083	2.85e-92	yjcF	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
PIBGAFCF_04084	7.24e-97	yybA	-	-	K	-	-	-	transcriptional
PIBGAFCF_04085	7.02e-190	ydeO	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2179)
PIBGAFCF_04086	2.55e-85	-	-	-	K	-	-	-	Winged helix DNA-binding domain
PIBGAFCF_04087	1.56e-144	ydgI	-	-	C	-	-	-	nitroreductase
PIBGAFCF_04088	3.76e-72	ypaA	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
PIBGAFCF_04089	1.96e-184	-	-	-	G	-	-	-	Major Facilitator Superfamily
PIBGAFCF_04090	3.74e-115	-	-	-	S	-	-	-	PFAM DinB family protein
PIBGAFCF_04091	7.61e-142	-	-	-	K	-	-	-	FCD domain
PIBGAFCF_04092	0.0	sacC3	3.2.1.65	GH32	G	ko:K01212	ko00500,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 32 family
PIBGAFCF_04093	0.0	sacB	2.4.1.10, 2.4.1.9	GH68	M	ko:K00692,ko:K20811	ko00500,ko01100,ko02020,map00500,map01100,map02020	ko00000,ko00001,ko01000,ko01003	levansucrase activity
PIBGAFCF_04094	4.42e-192	ypaH	-	-	EG	-	-	-	COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PIBGAFCF_04095	4.01e-209	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	Inorganic pyrophosphatase
PIBGAFCF_04096	1.79e-84	yybR	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_04097	3.93e-104	cotF	-	-	M	ko:K06329	-	ko00000	Spore coat protein
PIBGAFCF_04099	8.64e-189	yybS	-	-	S	-	-	-	membrane
PIBGAFCF_04100	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
PIBGAFCF_04101	2.25e-95	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	binds to the 23S rRNA
PIBGAFCF_04102	4.29e-103	-	-	-	KLT	-	-	-	COG0515 Serine threonine protein kinase
PIBGAFCF_04103	1.44e-150	-	-	-	S	-	-	-	GlcNAc-PI de-N-acetylase
PIBGAFCF_04104	3.93e-279	-	-	-	M	-	-	-	Glycosyltransferase Family 4
PIBGAFCF_04105	2.87e-291	-	-	-	S	-	-	-	Carbamoyl-phosphate synthase L chain, ATP binding domain
PIBGAFCF_04106	3.74e-242	-	-	-	S	-	-	-	Ecdysteroid kinase
PIBGAFCF_04107	4.7e-272	-	-	-	M	-	-	-	Glycosyltransferase Family 4
PIBGAFCF_04108	1.21e-23	yycC	-	-	K	-	-	-	YycC-like protein
PIBGAFCF_04110	5.03e-35	yycD	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2188)
PIBGAFCF_04111	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
PIBGAFCF_04112	1.06e-92	yycE	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PIBGAFCF_04113	4.45e-315	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PIBGAFCF_04118	1.51e-172	yycF	-	-	T	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PIBGAFCF_04119	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
PIBGAFCF_04120	0.0	yycH	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_04121	1.1e-191	yycI	-	-	S	-	-	-	protein conserved in bacteria
PIBGAFCF_04122	4.01e-191	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I
PIBGAFCF_04123	1.37e-270	yyxA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PIBGAFCF_04124	6.88e-86	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
PIBGAFCF_04125	5.56e-07	-	-	-	K	ko:K02483	-	ko00000,ko02022	PFAM response regulator receiver
PIBGAFCF_04126	9.72e-101	-	-	-	K	ko:K02483	-	ko00000,ko02022	PFAM response regulator receiver
PIBGAFCF_04127	5.41e-310	-	2.7.13.3	-	T	ko:K02484	-	ko00000,ko01000,ko01001,ko02022	COG0642 Signal transduction histidine kinase
PIBGAFCF_04128	8.24e-255	-	-	-	S	-	-	-	Major Facilitator Superfamily
PIBGAFCF_04129	0.0	rocR	-	-	KT	ko:K06714	-	ko00000,ko03000	COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
PIBGAFCF_04130	3.82e-57	sdpR	-	-	K	-	-	-	transcriptional
PIBGAFCF_04131	1.27e-92	yvaZ	-	-	S	-	-	-	Immunity protein that provides protection for the cell against the toxic effects of SDP, its own SdpC-derived killing factor, and that functions as a receptor signal transduction protein as well. Once SDP accumulates in the extracellular milieu, SdpI binds to SDP, causing sequestration of SdpR at the bacterial membrane
PIBGAFCF_04132	1.75e-295	rocD	2.6.1.13	-	E	ko:K00819	ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130	ko00000,ko00001,ko01000,ko01007	Catalyzes the interconversion of ornithine to glutamate semialdehyde
PIBGAFCF_04133	0.0	rocE	-	-	E	ko:K02205,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
PIBGAFCF_04134	7.27e-210	rocF	3.5.3.1	-	E	ko:K01476	ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146	ko00000,ko00001,ko00002,ko01000	Belongs to the arginase family
PIBGAFCF_04135	2.05e-256	-	-	-	S	ko:K06361,ko:K06365,ko:K06366	ko02024,map02024	ko00000,ko00001,ko01000	Histidine kinase
PIBGAFCF_04137	1.4e-94	yycN	-	-	K	-	-	-	Acetyltransferase
PIBGAFCF_04138	3.13e-226	-	-	-	C	-	-	-	oxidoreductases (related to aryl-alcohol dehydrogenases)
PIBGAFCF_04139	6.27e-167	yycO	-	-	S	-	-	-	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
PIBGAFCF_04140	5.96e-264	yycP	-	-	-	-	-	-	-
PIBGAFCF_04144	1.01e-105	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PIBGAFCF_04145	0.0	-	-	-	L	-	-	-	AAA ATPase domain
PIBGAFCF_04146	2.15e-301	-	-	-	L	-	-	-	AAA domain
PIBGAFCF_04147	6.73e-20	-	-	-	L	-	-	-	AAA domain
PIBGAFCF_04148	6.58e-27	-	-	-	-	-	-	-	-
PIBGAFCF_04149	3.9e-208	-	-	-	S	-	-	-	Fusaric acid resistance protein-like
PIBGAFCF_04150	7.21e-200	pucA	1.17.1.4	-	O	ko:K00087,ko:K07402	ko00230,ko01100,ko01120,map00230,map01100,map01120	ko00000,ko00001,ko00002,ko01000	COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
PIBGAFCF_04151	8.88e-106	pucB	1.17.1.4, 2.7.7.76	-	S	ko:K00087,ko:K07141	ko00230,ko00790,ko01100,ko01120,map00230,map00790,map01100,map01120	ko00000,ko00001,ko00002,ko01000	MobA-like NTP transferase domain
PIBGAFCF_04152	1.76e-147	-	-	-	C	-	-	-	COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs
PIBGAFCF_04153	0.0	-	-	-	C	-	-	-	COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs
PIBGAFCF_04154	1.16e-182	-	-	-	C	-	-	-	COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM CutM homologs
PIBGAFCF_04155	1.13e-101	pucE	1.2.5.3	-	C	ko:K03518	-	ko00000,ko01000	COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs
PIBGAFCF_04156	0.0	fbp	3.1.3.11	-	G	ko:K04041	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Firmicute fructose-1,6-bisphosphatase
PIBGAFCF_04157	9.3e-53	-	-	-	S	-	-	-	COG NOG14552 non supervised orthologous group
PIBGAFCF_04158	0.0	srfAA	-	-	Q	ko:K15654,ko:K15655,ko:K16119	ko01054,ko02024,map01054,map02024	ko00000,ko00001,ko01008	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PIBGAFCF_04162	5.52e-77	yddG	-	-	S	-	-	-	maturation of SSU-rRNA
PIBGAFCF_04163	7.23e-201	yddH	-	-	M	-	-	-	Lysozyme-like
PIBGAFCF_04164	6.62e-74	yddI	-	-	-	-	-	-	-
PIBGAFCF_04165	6.17e-48	yddJ	-	-	S	-	-	-	Domain of unknown function with cystatin-like fold (DUF4467)
PIBGAFCF_04168	5.51e-86	rapA	-	-	S	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	ko00000,ko00001,ko01000	Response regulator aspartate phosphatase
PIBGAFCF_04170	1.06e-176	-	-	-	I	ko:K01066	-	ko00000,ko01000	esterase
PIBGAFCF_04171	3.54e-62	ohrB	-	-	O	-	-	-	OsmC-like protein
PIBGAFCF_04172	7.77e-65	ohrR	-	-	K	-	-	-	Transcriptional regulator
PIBGAFCF_04173	2.16e-48	bofA	-	-	S	ko:K06317	-	ko00000	Sigma-K factor-processing regulatory protein BofA
PIBGAFCF_04174	7.67e-43	yaaL	-	-	S	-	-	-	Protein of unknown function (DUF2508)
PIBGAFCF_04175	6e-142	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PIBGAFCF_04176	6.9e-52	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PIBGAFCF_04177	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PIBGAFCF_04178	5.61e-108	tadA	3.5.4.33	-	FJ	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PIBGAFCF_04179	4.62e-125	yaaI	-	-	Q	-	-	-	COG1335 Amidases related to nicotinamidase
PIBGAFCF_04180	8.84e-272	yaaH	-	-	M	ko:K06306	-	ko00000	Glycoside Hydrolase Family
PIBGAFCF_04181	3.32e-148	dgk	2.7.1.113	-	F	ko:K15518	ko00230,map00230	ko00000,ko00001,ko01000	Deoxyguanosine kinase
PIBGAFCF_04182	1.4e-154	dck	2.7.1.74, 2.7.1.76	-	F	ko:K15519	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko01000	Deoxycytidine kinase
PIBGAFCF_04184	2.36e-251	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
PIBGAFCF_04185	9.36e-278	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PIBGAFCF_04186	2.35e-138	pdxT	4.3.3.6	-	H	ko:K08681	ko00750,map00750	ko00000,ko00001,ko01000	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
PIBGAFCF_04187	7.47e-202	pdxS	4.3.3.6	-	H	ko:K06215	ko00750,map00750	ko00000,ko00001,ko01000	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
PIBGAFCF_04188	1.03e-315	dacA	3.4.16.4	-	M	ko:K01286,ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
PIBGAFCF_04189	0.0	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
PIBGAFCF_04190	1.64e-224	yaaC	-	-	S	-	-	-	YaaC-like Protein
PIBGAFCF_04191	3.72e-36	-	-	-	S	-	-	-	Protein of unknown function (DUF1657)
PIBGAFCF_04192	4.82e-103	-	-	-	S	-	-	-	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PIBGAFCF_04193	4.11e-105	spoVAC	-	-	S	ko:K06405	-	ko00000	stage V sporulation protein AC
PIBGAFCF_04194	1e-249	spoVAD	-	-	I	ko:K06406	-	ko00000	Stage V sporulation protein AD
PIBGAFCF_04195	6.17e-75	spoVAE	-	-	S	ko:K06407	-	ko00000	stage V sporulation protein
PIBGAFCF_04196	1.15e-39	-	-	-	S	-	-	-	Protein of unknown function (DUF1657)
PIBGAFCF_04197	2.29e-192	-	-	-	S	-	-	-	membrane
PIBGAFCF_04198	1.92e-92	-	-	-	S	-	-	-	Protein of unknown function (DUF421)
PIBGAFCF_04199	0.0	-	-	-	I	-	-	-	PLD-like domain
PIBGAFCF_04200	3.21e-305	-	-	-	L	-	-	-	COG3328 Transposase and inactivated derivatives
PIBGAFCF_04201	4.04e-103	-	-	-	-	-	-	-	-
PIBGAFCF_04202	2.84e-123	tnpR	-	-	L	-	-	-	resolvase
PIBGAFCF_04203	0.0	-	-	-	L	-	-	-	Transposase and inactivated derivatives, TnpA family
PIBGAFCF_04204	1.07e-57	-	-	-	S	-	-	-	transposition, DNA-mediated
PIBGAFCF_04205	6.51e-150	-	-	-	S	-	-	-	HTH-like domain
PIBGAFCF_04215	7.55e-59	orfX1	-	-	L	-	-	-	Transposase
PIBGAFCF_04216	5.6e-173	-	-	-	L	-	-	-	Integrase core domain
PIBGAFCF_04223	1.1e-14	-	-	-	-	-	-	-	-
PIBGAFCF_04224	1.67e-15	-	-	-	S	-	-	-	Protein of unknown function (DUF2815)