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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
LNEOGEMI_00001	5.49e-48	-	-	-	L	ko:K07483	-	ko00000	Transposase
LNEOGEMI_00002	6.41e-126	-	-	-	L	ko:K07497	-	ko00000	HTH-like domain
LNEOGEMI_00003	4.53e-96	-	-	-	L	ko:K07451,ko:K07452	-	ko00000,ko01000,ko02048	HNH endonuclease
LNEOGEMI_00004	0.0	-	-	-	G	-	-	-	beta-fructofuranosidase activity
LNEOGEMI_00005	1.75e-173	-	-	-	T	ko:K07720	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	helix_turn_helix, arabinose operon control protein
LNEOGEMI_00006	0.0	-	2.7.13.3	-	T	ko:K07718	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
LNEOGEMI_00007	1.27e-314	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
LNEOGEMI_00008	1.22e-219	-	-	-	U	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_00009	9.39e-192	ugpE3	-	-	G	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_00010	0.0	-	-	-	C	-	-	-	FAD dependent oxidoreductase
LNEOGEMI_00011	0.0	malH	3.2.1.122	GH4	G	ko:K01232	ko00500,map00500	ko00000,ko00001,ko01000	COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
LNEOGEMI_00012	0.0	malP	2.7.1.208	-	G	ko:K02749,ko:K02750	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
LNEOGEMI_00013	6.91e-180	glvR	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
LNEOGEMI_00014	2.51e-91	-	-	-	S	-	-	-	Protein of unknown function (DUF1648)
LNEOGEMI_00015	4.42e-97	-	-	-	-	-	-	-	-
LNEOGEMI_00017	5.4e-48	yqjY	-	-	K	ko:K06977	-	ko00000	Acetyltransferase (GNAT) domain
LNEOGEMI_00018	7.63e-221	lacC	2.7.1.144	-	G	ko:K00917	ko00052,ko01100,map00052,map01100	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family
LNEOGEMI_00019	9.72e-182	-	-	-	K	ko:K02530	-	ko00000,ko03000	COG1349 Transcriptional regulators of sugar metabolism
LNEOGEMI_00020	3.79e-101	-	2.7.1.200	-	GT	ko:K02773	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LNEOGEMI_00021	1.94e-55	-	2.7.1.200	-	G	ko:K02774	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG3414 Phosphotransferase system, galactitol-specific IIB component
LNEOGEMI_00022	2.91e-311	-	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	COG3775 Phosphotransferase system, galactitol-specific IIC component
LNEOGEMI_00023	1.08e-246	-	1.1.1.14, 1.1.1.251	-	C	ko:K00008,ko:K00094	ko00040,ko00051,ko00052,ko01100,map00040,map00051,map00052,map01100	ko00000,ko00001,ko00002,ko01000	Alcohol dehydrogenase GroES-like domain
LNEOGEMI_00024	9.81e-200	kbaY	4.1.2.13, 4.1.2.40	-	G	ko:K01624,ko:K08302	ko00010,ko00030,ko00051,ko00052,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00052,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway
LNEOGEMI_00025	7.78e-72	yyaQ	-	-	S	-	-	-	Protein conserved in bacteria
LNEOGEMI_00026	1.34e-131	folE2	3.5.4.16	-	S	ko:K09007	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Converts GTP to 7,8-dihydroneopterin triphosphate
LNEOGEMI_00027	6.31e-78	yoaS	-	-	S	-	-	-	membrane
LNEOGEMI_00028	1.23e-39	-	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
LNEOGEMI_00029	7.52e-176	yoaT	-	-	S	-	-	-	Protein of unknown function (DUF817)
LNEOGEMI_00033	1.1e-115	-	-	-	K	-	-	-	Helix-turn-helix domain
LNEOGEMI_00034	2.67e-206	rspA	4.2.1.8	-	M	ko:K08323	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the mandelate racemase muconate lactonizing enzyme family
LNEOGEMI_00035	5.57e-128	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
LNEOGEMI_00036	1.73e-70	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
LNEOGEMI_00038	1.71e-311	-	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
LNEOGEMI_00039	1.12e-181	-	-	-	P	ko:K02033	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_00040	2.94e-170	-	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	N-terminal TM domain of oligopeptide transport permease C
LNEOGEMI_00041	1.62e-179	-	-	-	P	ko:K02031,ko:K15583,ko:K16202	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
LNEOGEMI_00042	4.28e-192	-	-	-	E	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
LNEOGEMI_00043	1.83e-171	-	3.4.17.11	-	E	ko:K01295	-	ko00000,ko01000,ko01002	Peptidase dimerisation domain
LNEOGEMI_00045	0.0	yvcC1	3.6.3.44	-	V	ko:K02021,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter
LNEOGEMI_00046	2.63e-209	XK27_06795	-	-	K	ko:K20391	ko02024,map02024	ko00000,ko00001,ko03000	sequence-specific DNA binding
LNEOGEMI_00048	0.0	bsaB	-	-	S	ko:K20483	ko02020,ko02024,map02020,map02024	ko00000,ko00001	Lantibiotic dehydratase, C terminus
LNEOGEMI_00049	0.0	spaC1	-	-	V	ko:K20484	ko02020,ko02024,map02020,map02024	ko00000,ko00001	Lanthionine synthetase C-like protein
LNEOGEMI_00050	3.1e-131	-	-	-	H	-	-	-	Flavoprotein
LNEOGEMI_00051	8.87e-158	pstB13	-	-	V	-	-	-	AAA domain, putative AbiEii toxin, Type IV TA system
LNEOGEMI_00052	3.04e-159	-	-	-	S	-	-	-	ABC-2 family transporter protein
LNEOGEMI_00053	3.05e-161	-	-	-	-	-	-	-	-
LNEOGEMI_00054	1.75e-156	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
LNEOGEMI_00055	0.0	-	2.7.13.3	-	T	ko:K20487	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
LNEOGEMI_00056	3.06e-42	VVA1313	-	-	GM	-	-	-	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LNEOGEMI_00058	5.19e-86	-	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Helix-hairpin-helix motif
LNEOGEMI_00060	6.06e-224	-	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Inosine-uridine preferring nucleoside hydrolase
LNEOGEMI_00061	6.64e-233	rbsR	-	-	K	ko:K02529	-	ko00000,ko03000	transcriptional
LNEOGEMI_00062	2.69e-197	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LNEOGEMI_00063	2.58e-80	rbsD	5.4.99.62	-	G	ko:K06726	ko02010,map02010	ko00000,ko00001,ko01000	Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
LNEOGEMI_00064	0.0	rbsA	3.6.3.17	-	G	ko:K10441	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system
LNEOGEMI_00065	2.68e-205	rbsC	-	-	G	ko:K10440	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
LNEOGEMI_00066	4.64e-205	rbsB	-	-	G	ko:K10439	ko02010,ko02030,map02010,map02030	ko00000,ko00001,ko00002,ko02000	COG1879 ABC-type sugar transport system, periplasmic component
LNEOGEMI_00067	4.61e-149	-	-	-	-	-	-	-	-
LNEOGEMI_00068	3.74e-186	yaaC	-	-	S	-	-	-	YaaC-like Protein
LNEOGEMI_00069	0.0	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
LNEOGEMI_00070	1.62e-304	dacA	3.4.16.4	-	M	ko:K01286,ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
LNEOGEMI_00071	3.16e-280	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LNEOGEMI_00072	7.85e-187	mtnU	3.5.1.3	-	S	ko:K13566	ko00250,map00250	ko00000,ko00001,ko01000	Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
LNEOGEMI_00073	0.0	pucR	-	-	QT	ko:K09684	-	ko00000,ko03000	COG2508 Regulator of polyketide synthase expression
LNEOGEMI_00074	0.0	rocR	-	-	KT	ko:K06714	-	ko00000,ko03000	COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
LNEOGEMI_00075	1.6e-290	rocD	2.6.1.13	-	E	ko:K00819	ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130	ko00000,ko00001,ko01000,ko01007	Catalyzes the interconversion of ornithine to glutamate semialdehyde
LNEOGEMI_00076	1.97e-239	rocG	1.4.1.2	-	E	ko:K00260	ko00220,ko00250,ko00430,ko00910,ko01100,map00220,map00250,map00430,map00910,map01100	ko00000,ko00001,ko01000	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
LNEOGEMI_00077	2.99e-307	nhaC_2	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter
LNEOGEMI_00078	3.52e-297	-	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
LNEOGEMI_00079	6.52e-290	-	2.5.1.48, 4.4.1.11	-	E	ko:K01739,ko:K01761	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
LNEOGEMI_00080	1.03e-285	-	-	-	E	ko:K01436	-	ko00000,ko01000,ko01002	Peptidase dimerisation domain
LNEOGEMI_00081	7.29e-245	-	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Homoserine dehydrogenase
LNEOGEMI_00082	0.0	gabD_2	1.2.1.9	-	C	ko:K00131	ko00010,ko00030,ko01100,ko01120,ko01200,map00010,map00030,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
LNEOGEMI_00083	1.59e-79	-	-	-	S	ko:K08981	-	ko00000	Bacterial PH domain
LNEOGEMI_00084	8.95e-182	glnH	-	-	ET	ko:K02030,ko:K10036	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Ligated ion channel L-glutamate- and glycine-binding site
LNEOGEMI_00085	1.23e-141	glnP	-	-	E	ko:K02029,ko:K10037,ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Polar amino acid ABC transporter, inner membrane subunit
LNEOGEMI_00086	3.37e-162	-	3.6.3.21	-	E	ko:K02028,ko:K10038	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1126 ABC-type polar amino acid transport system, ATPase component
LNEOGEMI_00087	3.88e-242	-	-	-	E	ko:K02032,ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
LNEOGEMI_00088	6.47e-245	-	-	-	P	ko:K02031,ko:K16202	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
LNEOGEMI_00089	3.19e-214	-	-	-	EP	ko:K02033	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
LNEOGEMI_00090	1.83e-203	-	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
LNEOGEMI_00091	0.0	gsiB_3	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0747 ABC-type dipeptide transport system, periplasmic component
LNEOGEMI_00093	6.95e-108	tadA	3.5.4.33	-	FJ	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
LNEOGEMI_00094	7.88e-131	clpP1	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
LNEOGEMI_00095	1.57e-121	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
LNEOGEMI_00096	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LNEOGEMI_00097	4.53e-51	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
LNEOGEMI_00098	9.21e-142	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LNEOGEMI_00099	1.6e-40	-	-	-	S	-	-	-	Protein of unknown function (DUF2508)
LNEOGEMI_00100	7.11e-29	bofA	-	-	S	ko:K06317	-	ko00000	Sigma-K factor-processing regulatory protein BofA
LNEOGEMI_00101	1.86e-17	-	-	-	-	-	-	-	-
LNEOGEMI_00102	2.11e-172	-	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
LNEOGEMI_00103	3.78e-41	-	-	-	K	-	-	-	MerR family transcriptional regulator
LNEOGEMI_00104	1.28e-312	gntP	-	-	EG	ko:K03299	-	ko00000,ko02000	COG2610 H gluconate symporter and related permeases
LNEOGEMI_00105	0.0	-	4.2.1.82	-	EG	ko:K22396	ko00040,map00040	ko00000,ko00001,ko01000	Dehydratase family
LNEOGEMI_00106	3.53e-178	-	-	-	K	ko:K19333	-	ko00000,ko03000	helix_turn_helix isocitrate lyase regulation
LNEOGEMI_00107	2.17e-208	-	4.2.1.141	-	S	ko:K14259	ko00040,map00040	ko00000,ko00001,ko01000	Fumarylacetoacetate (FAA) hydrolase family
LNEOGEMI_00108	1.16e-211	-	4.1.2.28, 4.3.3.7	-	EM	ko:K01714,ko:K22397	ko00040,ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00040,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Dihydrodipicolinate synthetase family
LNEOGEMI_00109	0.0	-	-	-	C	ko:K22187	ko00040,map00040	ko00000,ko00001,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
LNEOGEMI_00110	4.35e-159	adcB	-	-	P	ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
LNEOGEMI_00111	2.49e-166	adcC	-	-	P	ko:K02074,ko:K09817	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	'COG1121 ABC-type Mn Zn transport systems, ATPase component'
LNEOGEMI_00112	0.0	psaA3	-	-	P	ko:K09815	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Zinc-uptake complex component A periplasmic
LNEOGEMI_00113	1.5e-232	zinT	-	-	S	ko:K09815	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
LNEOGEMI_00114	5.91e-216	yjiA	-	-	S	-	-	-	Cobalamin biosynthesis protein CobW
LNEOGEMI_00115	2.87e-186	-	-	-	P	-	-	-	COG0370 Fe2 transport system protein B
LNEOGEMI_00116	6.54e-95	dcd	3.5.4.13	-	F	ko:K01494	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	2'-deoxycytidine 5'-triphosphate deaminase (DCD)
LNEOGEMI_00118	5.54e-207	-	-	-	S	-	-	-	Alpha beta hydrolase
LNEOGEMI_00119	1.34e-174	ygaJ	3.4.13.21	-	E	ko:K05995	-	ko00000,ko01000,ko01002	Belongs to the peptidase S51 family
LNEOGEMI_00120	1.53e-209	-	-	-	Q	-	-	-	COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
LNEOGEMI_00121	4.59e-96	-	-	-	S	-	-	-	DinB superfamily
LNEOGEMI_00122	0.0	M1-1044	-	-	S	-	-	-	Belongs to the UPF0061 (SELO) family
LNEOGEMI_00123	4.85e-232	nagC_1	-	-	GK	-	-	-	ROK family
LNEOGEMI_00124	1.2e-266	glcP1	-	-	G	ko:K08174	-	ko00000,ko02000	Major Facilitator Superfamily
LNEOGEMI_00125	0.0	yicI	3.2.1.177	GH31	G	ko:K01811	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 31 family
LNEOGEMI_00126	0.0	-	2.7.13.3	-	T	ko:K07718	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
LNEOGEMI_00127	0.0	-	-	-	T	ko:K07720	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	helix_turn_helix, arabinose operon control protein
LNEOGEMI_00128	4.78e-223	-	-	-	P	ko:K17319	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_00129	5.35e-216	lplC1	-	-	G	ko:K17320	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_00130	0.0	lplA3	-	-	G	ko:K17318	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
LNEOGEMI_00131	0.0	-	3.2.1.51	GH95	G	ko:K15923	ko00511,map00511	ko00000,ko00001,ko01000	Glycosyl hydrolase family 65, N-terminal domain
LNEOGEMI_00132	2.78e-167	ytbQ	1.1.1.203, 1.1.1.388	-	GM	ko:K18981,ko:K19243	ko00030,ko00053,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00053,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	NAD dependent epimerase/dehydratase family
LNEOGEMI_00133	1.19e-133	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
LNEOGEMI_00134	2.03e-249	-	4.2.2.2	-	M	ko:K01728	ko00040,ko02024,map00040,map02024	ko00000,ko00001,ko01000	Pectic acid lyase
LNEOGEMI_00135	7.46e-201	-	-	-	K	-	-	-	AraC-like ligand binding domain
LNEOGEMI_00136	0.0	-	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_00137	0.0	-	-	-	G	ko:K17318	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
LNEOGEMI_00138	6.89e-231	-	-	-	G	ko:K17319	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG4209 ABC-type polysaccharide transport system, permease component
LNEOGEMI_00139	3.76e-189	ytcP3	-	-	G	ko:K17320	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_00140	3.36e-80	-	-	-	E	-	-	-	Abhydrolase family
LNEOGEMI_00141	2.65e-95	-	-	-	E	-	-	-	Abhydrolase family
LNEOGEMI_00142	0.0	-	3.2.1.37, 3.2.1.55	GH43,GH51	G	ko:K01198,ko:K01209	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
LNEOGEMI_00143	1.39e-283	yteR	3.2.1.172	GH105	G	ko:K15532	-	ko00000,ko01000	unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
LNEOGEMI_00144	2.73e-101	-	-	-	G	-	-	-	carbohydrate transport
LNEOGEMI_00145	2.36e-155	yteU	-	-	S	-	-	-	Integral membrane protein
LNEOGEMI_00146	6.8e-316	yteT	-	-	S	-	-	-	Oxidoreductase family, C-terminal alpha/beta domain
LNEOGEMI_00147	0.0	uxaA	4.2.1.7	-	G	ko:K01685	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Altronate
LNEOGEMI_00148	0.0	uxaB	1.1.1.58	-	G	ko:K00041	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	tagaturonate reductase activity
LNEOGEMI_00149	1.18e-16	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
LNEOGEMI_00150	0.0	hsdR	3.1.21.3	-	L	ko:K01153	-	ko00000,ko01000,ko02048	Type I restriction enzyme R protein N terminus (HSDR_N)
LNEOGEMI_00151	6.62e-260	yvmA	-	-	EGP	-	-	-	Major Facilitator Superfamily
LNEOGEMI_00152	4.49e-97	rmaD	-	-	K	-	-	-	Iron dependent repressor, N-terminal DNA binding domain
LNEOGEMI_00153	1.56e-84	M1-431	-	-	S	-	-	-	Protein of unknown function (DUF1706)
LNEOGEMI_00154	4.54e-224	dhaK	2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15	-	G	ko:K00863,ko:K05878	ko00051,ko00561,ko00680,ko01100,ko01120,ko01200,ko04622,map00051,map00561,map00680,map01100,map01120,map01200,map04622	ko00000,ko00001,ko00002,ko01000	Dihydroxyacetone kinase DhaK, subunit
LNEOGEMI_00155	3.72e-139	dhaL	2.7.1.121	-	S	ko:K05879	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak2
LNEOGEMI_00156	8.02e-84	-	2.7.1.121	-	S	ko:K05881	ko00561,map00561	ko00000,ko00001,ko01000,ko02000	PTS system fructose IIA component
LNEOGEMI_00157	2.83e-31	-	-	-	S	-	-	-	YfhD-like protein
LNEOGEMI_00158	1.68e-275	-	-	-	G	-	-	-	Transmembrane secretion effector
LNEOGEMI_00159	2.03e-221	-	-	-	S	-	-	-	Phosphotransferase enzyme family
LNEOGEMI_00160	1.51e-87	-	-	-	-	-	-	-	-
LNEOGEMI_00161	1.2e-284	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
LNEOGEMI_00162	0.0	-	-	-	S	-	-	-	proteins of the AP superfamily
LNEOGEMI_00163	8.69e-67	yhcN	-	-	S	-	-	-	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
LNEOGEMI_00164	1.28e-190	ykoQ	-	-	S	ko:K07098	-	ko00000	Calcineurin-like phosphoesterase superfamily domain
LNEOGEMI_00165	1.17e-215	-	-	-	E	ko:K00318	ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130	ko00000,ko00001,ko01000	Proline dehydrogenase
LNEOGEMI_00166	0.0	-	-	-	KT	-	-	-	Transcriptional regulator
LNEOGEMI_00167	0.0	rocA	1.2.1.88	-	C	ko:K00294	ko00250,ko00330,ko01100,map00250,map00330,map01100	ko00000,ko00001,ko01000	Belongs to the aldehyde dehydrogenase family. RocA subfamily
LNEOGEMI_00169	0.0	-	3.1.3.5, 3.6.1.45	-	F	ko:K01081,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	COG0737 5'-nucleotidase 2',3'-cyclic phosphodiesterase and related esterases
LNEOGEMI_00170	1.3e-36	-	-	-	K	ko:K07729	-	ko00000,ko03000	Transcriptional regulator
LNEOGEMI_00171	1.4e-98	ygaO	-	-	-	-	-	-	-
LNEOGEMI_00172	5.84e-129	-	-	-	Q	-	-	-	Isochorismatase family
LNEOGEMI_00173	0.0	htpG	-	-	O	ko:K04079	ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418	ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147	Molecular chaperone. Has ATPase activity
LNEOGEMI_00174	0.0	abgT_2	-	-	H	ko:K12942	-	ko00000	AbgT putative transporter family
LNEOGEMI_00175	3.68e-277	cypA	-	-	C	ko:K15468	-	ko00000,ko01008	Cytochrome P450
LNEOGEMI_00176	9.68e-26	-	-	-	-	-	-	-	-
LNEOGEMI_00177	0.0	-	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
LNEOGEMI_00178	1.15e-173	lutA	-	-	C	ko:K18928	-	ko00000	Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source
LNEOGEMI_00179	0.0	lutB	-	-	C	ko:K18929	-	ko00000	Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate
LNEOGEMI_00180	1.33e-158	lutC	-	-	S	ko:K00782	-	ko00000	Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source
LNEOGEMI_00181	7.2e-173	yvfI	-	-	K	ko:K05799	-	ko00000,ko03000	COG2186 Transcriptional regulators
LNEOGEMI_00182	1.08e-285	gbsB	1.1.1.1	-	C	ko:K11440	ko00260,ko01100,map00260,map01100	ko00000,ko00001,ko00002,ko01000	alcohol dehydrogenase
LNEOGEMI_00183	0.0	gbsA	1.2.1.8	-	C	ko:K00130	ko00260,ko01100,map00260,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
LNEOGEMI_00184	6.28e-130	-	-	-	K	ko:K22109	-	ko00000,ko03000	Belongs to the GbsR family
LNEOGEMI_00185	4.01e-200	-	-	-	E	ko:K02002	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Substrate binding domain of ABC-type glycine betaine transport system
LNEOGEMI_00186	4.17e-206	-	-	-	Q	-	-	-	calcium- and calmodulin-responsive adenylate cyclase activity
LNEOGEMI_00187	0.0	-	-	-	M	-	-	-	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
LNEOGEMI_00188	4.38e-134	yhcS	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	COG3764 Sortase (surface protein transpeptidase)
LNEOGEMI_00189	3.76e-64	-	-	-	K	ko:K02538	-	ko00000,ko03000	transcriptional antiterminator
LNEOGEMI_00190	4.94e-143	-	-	-	K	ko:K02538	-	ko00000,ko03000	transcriptional antiterminator
LNEOGEMI_00191	1.87e-87	-	-	-	K	ko:K02538	-	ko00000,ko03000	transcriptional antiterminator
LNEOGEMI_00192	0.0	lipA1	-	-	S	-	-	-	acetyltransferases and hydrolases with the alpha beta hydrolase fold
LNEOGEMI_00193	2.36e-145	mqnB	3.2.2.26	-	F	ko:K11783	ko00130,ko01110,map00130,map01110	ko00000,ko00001,ko01000	Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2)
LNEOGEMI_00194	7.23e-200	mqnD	-	-	S	ko:K11785	ko00130,ko01110,map00130,map01110	ko00000,ko00001,ko01000	Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
LNEOGEMI_00195	7.26e-133	ywrB	-	-	P	ko:K07240	-	ko00000,ko02000	COG2059 Chromate transport protein ChrA
LNEOGEMI_00196	2.56e-111	-	-	-	P	ko:K07240	-	ko00000,ko02000	COG2059 Chromate transport protein ChrA
LNEOGEMI_00197	2.19e-168	-	-	-	K	-	-	-	DeoR C terminal sensor domain
LNEOGEMI_00198	1.17e-167	kduD	1.1.1.127	-	IQ	ko:K00065	ko00040,map00040	ko00000,ko00001,ko01000	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
LNEOGEMI_00199	1.85e-202	kduI	5.3.1.17	-	G	ko:K01815	ko00040,map00040	ko00000,ko00001,ko01000	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
LNEOGEMI_00200	0.0	uxaC	5.3.1.12	-	G	ko:K01812	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	glucuronate isomerase
LNEOGEMI_00201	3.58e-148	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
LNEOGEMI_00202	3.1e-168	mta	-	-	K	-	-	-	transcriptional
LNEOGEMI_00203	2.44e-266	bcsA	-	-	Q	ko:K16167	-	ko00000,ko01008	Naringenin-chalcone synthase
LNEOGEMI_00204	2.79e-126	ypbQ	-	-	S	ko:K16168	-	ko00000,ko01008	protein conserved in bacteria
LNEOGEMI_00207	5.26e-297	-	-	-	G	-	-	-	Major facilitator Superfamily
LNEOGEMI_00208	0.0	yheI	-	-	V	ko:K18216,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko01504,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
LNEOGEMI_00209	0.0	yheH	-	-	V	ko:K18217,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko01504,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
LNEOGEMI_00210	0.0	yvgP	-	-	P	ko:K03316	-	ko00000	COG0025 NhaP-type Na H and K H antiporters
LNEOGEMI_00211	0.0	-	2.7.13.3	-	T	ko:K02476,ko:K11614,ko:K11637	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Signal transduction histidine kinase regulating citrate malate metabolism
LNEOGEMI_00212	3.15e-154	citT	-	-	T	ko:K11638	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
LNEOGEMI_00213	3.73e-239	-	-	-	S	ko:K07795	ko02020,map02020	ko00000,ko00001,ko02000	Tripartite tricarboxylate transporter family receptor
LNEOGEMI_00214	7.13e-89	-	-	-	S	ko:K07794	ko02020,map02020	ko00000,ko00001,ko02000	Tripartite tricarboxylate transporter TctB family
LNEOGEMI_00215	0.0	-	-	-	S	ko:K07793	ko02020,map02020	ko00000,ko00001,ko02000	Tripartite tricarboxylate transporter TctA family
LNEOGEMI_00216	1.84e-07	-	-	-	T	-	-	-	SpoVT / AbrB like domain
LNEOGEMI_00217	2.1e-90	-	-	-	S	ko:K07341	-	ko00000,ko02048	Fic/DOC family
LNEOGEMI_00219	1.02e-42	yebG	-	-	S	-	-	-	NETI protein
LNEOGEMI_00220	9.63e-88	-	-	-	S	-	-	-	Calcium/calmodulin dependent protein kinase II association domain
LNEOGEMI_00222	1.5e-128	-	-	-	-	-	-	-	-
LNEOGEMI_00223	3.32e-154	-	-	-	S	-	-	-	PFAM AIG2 family protein
LNEOGEMI_00224	6.57e-125	ydaF	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
LNEOGEMI_00225	1.27e-164	-	-	-	S	-	-	-	CAAX protease self-immunity
LNEOGEMI_00226	2.26e-104	purE	5.4.99.18	-	F	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LNEOGEMI_00227	1.17e-269	purK	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LNEOGEMI_00228	1.92e-316	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LNEOGEMI_00229	1.13e-164	purC	6.3.2.6	-	F	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the SAICAR synthetase family
LNEOGEMI_00230	5.87e-51	purS	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LNEOGEMI_00231	6.66e-167	purQ	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LNEOGEMI_00232	0.0	purL	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LNEOGEMI_00233	0.0	purF	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LNEOGEMI_00234	9.28e-249	purM	6.3.3.1	-	F	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoribosylformylglycinamidine cyclo-ligase
LNEOGEMI_00235	2.24e-126	purN	2.1.2.2	-	F	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LNEOGEMI_00236	0.0	purH	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	Bifunctional purine biosynthesis protein PurH
LNEOGEMI_00237	3.68e-294	purD	6.3.4.13	-	F	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the GARS family
LNEOGEMI_00238	4.68e-259	-	3.4.17.11	-	E	ko:K01295	-	ko00000,ko01000,ko01002	Peptidase dimerisation domain
LNEOGEMI_00239	2e-196	fhuD9	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
LNEOGEMI_00240	6.18e-115	ttr	-	-	K	-	-	-	GCN5 family acetyltransferase
LNEOGEMI_00241	1.18e-253	-	-	-	T	-	-	-	Signal transduction histidine kinase
LNEOGEMI_00242	3.54e-140	-	-	-	KT	-	-	-	LuxR family transcriptional regulator
LNEOGEMI_00243	1.66e-217	yfiL	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	COG1131 ABC-type multidrug transport system, ATPase component
LNEOGEMI_00244	2.5e-278	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	COG0842 ABC-type multidrug transport system, permease component
LNEOGEMI_00245	1.51e-237	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	COG0842 ABC-type multidrug transport system, permease component
LNEOGEMI_00247	1.73e-59	yvrO	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
LNEOGEMI_00252	0.0	M1-554	-	-	G	-	-	-	Endonuclease Exonuclease Phosphatase
LNEOGEMI_00253	6.8e-18	-	-	-	S	-	-	-	Inner spore coat protein D
LNEOGEMI_00254	5.96e-81	-	-	-	FJ	-	-	-	tRNA wobble adenosine to inosine editing
LNEOGEMI_00255	3.04e-199	-	-	-	P	ko:K02026,ko:K10190,ko:K10242	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PFAM binding-protein-dependent transport systems inner membrane component
LNEOGEMI_00256	1.34e-201	-	-	-	G	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_00257	2.38e-292	-	-	-	G	-	-	-	ABC transporter substrate-binding protein
LNEOGEMI_00258	9.11e-236	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
LNEOGEMI_00259	0.0	ltaS	2.7.8.20	-	M	ko:K01138,ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Belongs to the LTA synthase family
LNEOGEMI_00260	8.82e-164	lacR	-	-	K	ko:K02530	-	ko00000,ko03000	DeoR C terminal sensor domain
LNEOGEMI_00261	8.22e-269	galK	2.7.1.6	-	G	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
LNEOGEMI_00262	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
LNEOGEMI_00263	1.16e-213	-	-	-	Q	-	-	-	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
LNEOGEMI_00265	0.0	mdr	-	-	EGP	-	-	-	the major facilitator superfamily
LNEOGEMI_00266	0.0	rocB	-	-	E	-	-	-	arginine degradation protein
LNEOGEMI_00267	7.01e-213	gmuE	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	COG1940 Transcriptional regulator sugar kinase
LNEOGEMI_00268	1.07e-65	-	-	-	-	-	-	-	-
LNEOGEMI_00269	1.37e-31	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	Capsular polysaccharide biosynthesis protein
LNEOGEMI_00270	1.97e-168	yvcP	-	-	T	ko:K02483	-	ko00000,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LNEOGEMI_00271	3.86e-239	yvcQ	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
LNEOGEMI_00272	6.34e-181	yxdL_2	-	-	V	ko:K02003,ko:K11635	ko02020,map02020	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
LNEOGEMI_00273	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter (permease)
LNEOGEMI_00275	0.0	-	3.6.3.54	-	P	ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
LNEOGEMI_00276	1.97e-198	-	-	-	S	-	-	-	CAAX amino terminal protease family protein
LNEOGEMI_00277	5.43e-11	-	-	-	-	-	-	-	-
LNEOGEMI_00278	9.73e-132	sipS	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
LNEOGEMI_00279	3.3e-200	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
LNEOGEMI_00281	8.9e-174	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LNEOGEMI_00283	1.65e-96	ylqH	-	-	S	ko:K04061	-	ko00000,ko02044	FlhB HrpN YscU SpaS Family
LNEOGEMI_00284	1.27e-269	sucC	6.2.1.5	-	C	ko:K01903	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
LNEOGEMI_00285	3.09e-215	sucD	6.2.1.5	-	C	ko:K01902	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
LNEOGEMI_00286	2.49e-215	dprA	-	-	LU	ko:K04096	-	ko00000	Rossmann fold nucleotide-binding protein involved in DNA uptake
LNEOGEMI_00287	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LNEOGEMI_00288	0.0	trmFO	2.1.1.74	-	J	ko:K04094	-	ko00000,ko01000,ko03016,ko03036	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
LNEOGEMI_00289	1.53e-213	xerC	-	-	L	ko:K03733,ko:K04763	-	ko00000,ko03036	tyrosine recombinase XerC
LNEOGEMI_00290	2.12e-120	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
LNEOGEMI_00291	1.13e-295	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
LNEOGEMI_00292	2.27e-174	codY	-	-	K	ko:K03706	-	ko00000,ko03000	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
LNEOGEMI_00293	2.38e-86	flgB	-	-	N	ko:K02387	ko02040,map02040	ko00000,ko00001,ko02035	Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body
LNEOGEMI_00294	5.12e-96	flgC	-	-	N	ko:K02388	ko02040,map02040	ko00000,ko00001,ko02035	Belongs to the flagella basal body rod proteins family
LNEOGEMI_00295	2.85e-51	fliE	-	-	N	ko:K02408	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar hook-basal body
LNEOGEMI_00296	0.0	fliF	-	-	N	ko:K02409	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	The M ring may be actively involved in energy transduction
LNEOGEMI_00297	1.32e-227	fliG	-	-	N	ko:K02410	ko02030,ko02040,map02030,map02040	ko00000,ko00001,ko02035	One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation
LNEOGEMI_00298	1.93e-102	fliH	-	-	NU	ko:K02411	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	COG1317 Flagellar biosynthesis type III secretory pathway protein
LNEOGEMI_00299	1.14e-310	fliI	3.6.3.14	-	NU	ko:K02412	ko02040,map02040	ko00000,ko00001,ko01000,ko02035,ko02044	COG1157 Flagellar biosynthesis type III secretory pathway ATPase
LNEOGEMI_00300	1.79e-91	fliJ	-	-	N	ko:K02413	ko02040,map02040	ko00000,ko00001,ko02035	bacterial-type flagellum organization
LNEOGEMI_00302	3.08e-263	-	-	-	N	ko:K02414	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar hook-length control protein FliK
LNEOGEMI_00303	1.05e-93	flgD	-	-	N	ko:K02389	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar basal body rod modification protein
LNEOGEMI_00304	1.37e-179	flgG	-	-	N	ko:K02390	ko02040,map02040	ko00000,ko00001,ko02035	Flagellar basal body rod
LNEOGEMI_00305	1.26e-37	flbD	-	-	N	ko:K02385	-	ko00000,ko02035	protein, possibly involved in motility
LNEOGEMI_00306	9.32e-92	fliL	-	-	N	ko:K02415	-	ko00000,ko02035	Controls the rotational direction of flagella during chemotaxis
LNEOGEMI_00307	7.63e-224	fliM	-	-	N	ko:K02416	ko02030,ko02040,map02030,map02040	ko00000,ko00001,ko02035	One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation
LNEOGEMI_00308	4.7e-263	fliY	-	-	N	ko:K02417	ko02030,ko02040,map02030,map02040	ko00000,ko00001,ko02035,ko02044	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LNEOGEMI_00309	1.05e-77	cheY	-	-	T	ko:K03413	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko02022,ko02035	cheY-homologous receiver domain
LNEOGEMI_00310	1.78e-132	fliZ	-	-	N	ko:K02418	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Flagellar biosynthesis protein, FliO
LNEOGEMI_00311	1.47e-145	fliP	-	-	N	ko:K02419	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Plays a role in the flagellum-specific transport system
LNEOGEMI_00312	8.01e-54	fliQ	-	-	N	ko:K02420	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Role in flagellar biosynthesis
LNEOGEMI_00313	2.52e-167	fliR	-	-	N	ko:K02421	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Flagellar biosynthetic protein FliR
LNEOGEMI_00314	9.37e-237	flhB	-	-	N	ko:K02401	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LNEOGEMI_00315	0.0	flhA	-	-	N	ko:K02400	ko02040,map02040	ko00000,ko00001,ko02035,ko02044	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LNEOGEMI_00316	5.58e-222	flhF	-	-	N	ko:K02404	-	ko00000,ko02035	Flagellar biosynthesis regulator FlhF
LNEOGEMI_00317	2.84e-123	-	-	-	-	-	-	-	-
LNEOGEMI_00318	4.48e-206	cheB	3.1.1.61, 3.5.1.44	-	NT	ko:K03412	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR
LNEOGEMI_00319	2.06e-136	cheC	-	-	NT	ko:K03410	ko02030,map02030	ko00000,ko00001,ko02035	COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation
LNEOGEMI_00320	4.45e-109	cheD	3.5.1.44	-	NT	ko:K03411	ko02030,map02030	ko00000,ko00001,ko01000,ko02035	Deamidates glutamine residues to glutamate on methyl- accepting chemotaxis receptors (MCPs). CheD-mediated MCP deamidation is required for productive communication of the conformational signals of the chemoreceptors to the CheA kinase
LNEOGEMI_00321	7.05e-171	sigD	-	-	K	ko:K02405	ko02020,ko02025,ko02026,ko02040,ko05111,map02020,map02025,map02026,map02040,map05111	ko00000,ko00001,ko02035,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LNEOGEMI_00322	1.99e-05	ylxL	-	-	-	-	-	-	-
LNEOGEMI_00323	2.3e-170	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
LNEOGEMI_00324	8.35e-199	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LNEOGEMI_00325	3.37e-160	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
LNEOGEMI_00326	3.08e-115	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
LNEOGEMI_00327	1.76e-186	uppS	2.5.1.31	-	I	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
LNEOGEMI_00328	3.35e-175	cdsA	2.7.7.41	-	S	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
LNEOGEMI_00329	9.16e-264	dxr	1.1.1.267	-	I	ko:K00099	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
LNEOGEMI_00330	1.81e-292	rasP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
LNEOGEMI_00331	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
LNEOGEMI_00332	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LNEOGEMI_00333	1.1e-103	rimP	-	-	S	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
LNEOGEMI_00334	9.27e-251	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
LNEOGEMI_00335	3.35e-56	ylxR	-	-	K	ko:K07742	-	ko00000	nucleic-acid-binding protein implicated in transcription termination
LNEOGEMI_00336	4.13e-62	ylxQ	-	-	J	-	-	-	ribosomal protein
LNEOGEMI_00337	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
LNEOGEMI_00338	2.96e-55	ylxP	-	-	S	ko:K09764	-	ko00000	protein conserved in bacteria
LNEOGEMI_00339	2.49e-75	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LNEOGEMI_00340	2.37e-218	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LNEOGEMI_00341	1.95e-222	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
LNEOGEMI_00342	7.11e-57	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
LNEOGEMI_00343	0.0	pnp	2.7.7.8	-	J	ko:K00962	ko00230,ko00240,ko03018,map00230,map00240,map03018	ko00000,ko00001,ko00002,ko01000,ko03016,ko03019	Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
LNEOGEMI_00344	1.78e-240	ylxY	-	-	G	-	-	-	Sporulation protein, polysaccharide deacetylase
LNEOGEMI_00345	4.85e-279	mlpA	-	-	S	-	-	-	Belongs to the peptidase M16 family
LNEOGEMI_00346	1.52e-48	ymxH	-	-	S	-	-	-	YlmC YmxH family
LNEOGEMI_00347	9.09e-203	spoVFA	-	-	E	ko:K06410	-	ko00000	subunit a
LNEOGEMI_00348	7.62e-138	spoVFB	-	-	H	ko:K06411	-	ko00000	Together with DpaA, catalyzes the conversion of dihydrodipicolinate to dipicolinate (DPA)
LNEOGEMI_00349	1.03e-243	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LNEOGEMI_00350	2.52e-281	dapG	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
LNEOGEMI_00351	2.39e-199	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LNEOGEMI_00352	0.0	rnjB	-	-	S	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LNEOGEMI_00353	3.79e-165	tepA	-	-	OU	-	-	-	COG0740 Protease subunit of ATP-dependent Clp proteases
LNEOGEMI_00354	1.37e-06	-	-	-	S	-	-	-	YlzJ-like protein
LNEOGEMI_00355	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
LNEOGEMI_00356	1.18e-165	ymfC	-	-	K	ko:K03710	-	ko00000,ko03000	Transcriptional regulator
LNEOGEMI_00357	4.96e-289	albE	-	-	S	-	-	-	Peptidase M16
LNEOGEMI_00358	4.11e-311	ymfH	-	-	S	-	-	-	zinc protease
LNEOGEMI_00359	2.17e-152	ymfI	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
LNEOGEMI_00360	1.34e-51	ymfJ	-	-	S	-	-	-	Protein of unknown function (DUF3243)
LNEOGEMI_00361	5.43e-180	ymfK	-	-	S	-	-	-	Protein of unknown function (DUF3388)
LNEOGEMI_00362	4.82e-180	ymfM	-	-	S	ko:K15539	-	ko00000	protein conserved in bacteria
LNEOGEMI_00363	2.85e-128	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LNEOGEMI_00364	4.04e-284	cinA	3.5.1.42	-	S	ko:K03742,ko:K03743	ko00760,map00760	ko00000,ko00001,ko01000	Belongs to the CinA family
LNEOGEMI_00365	0.0	deaD	3.6.4.13	-	JKL	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
LNEOGEMI_00366	3.46e-242	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LNEOGEMI_00367	3.32e-239	-	-	-	L	-	-	-	Calcineurin-like phosphoesterase superfamily domain
LNEOGEMI_00368	0.0	-	-	-	L	-	-	-	AAA domain
LNEOGEMI_00369	8.1e-10	-	-	-	-	-	-	-	-
LNEOGEMI_00370	7.39e-147	-	-	-	L	-	-	-	DNA recombination
LNEOGEMI_00371	3.81e-293	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
LNEOGEMI_00372	1.76e-190	ymdB	-	-	S	ko:K02029,ko:K02030,ko:K09769	-	ko00000,ko00002,ko02000	protein conserved in bacteria
LNEOGEMI_00373	7.82e-51	spoVS	-	-	S	ko:K06416	-	ko00000	Stage V sporulation protein S
LNEOGEMI_00374	1.03e-195	tgl	2.3.2.13	-	H	ko:K00686	-	ko00000,ko01000	Probably plays a role in the assembly of the spore coat proteins by catalyzing epsilon-(gamma-glutamyl)lysine cross-links
LNEOGEMI_00375	0.0	miaB	2.8.4.3	-	J	ko:K06168	-	ko00000,ko01000,ko03016	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LNEOGEMI_00376	3.04e-86	ymcA	3.6.3.21	-	S	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	Belongs to the UPF0342 family
LNEOGEMI_00377	1.13e-133	cotE	-	-	S	ko:K06328	-	ko00000	Spore coat protein
LNEOGEMI_00378	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
LNEOGEMI_00379	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
LNEOGEMI_00380	1.42e-171	-	-	-	J	-	-	-	Putative SAM-dependent methyltransferase
LNEOGEMI_00381	7e-215	miaA	2.5.1.75	-	J	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LNEOGEMI_00382	1.24e-47	hfq	-	-	J	ko:K03666	ko02024,ko03018,ko05111,map02024,map03018,map05111	ko00000,ko00001,ko03019,ko03036	RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs
LNEOGEMI_00383	5.87e-231	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
LNEOGEMI_00384	5.8e-220	spoVK	-	-	O	ko:K06413	-	ko00000	stage V sporulation protein K
LNEOGEMI_00385	1.96e-311	ynbB	-	-	P	-	-	-	COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance
LNEOGEMI_00386	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
LNEOGEMI_00387	2.56e-276	-	-	-	C	ko:K11472	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001	FAD binding domain
LNEOGEMI_00388	0.0	glcF	-	-	C	ko:K11473	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001	Glycolate oxidase
LNEOGEMI_00389	0.0	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
LNEOGEMI_00390	0.0	glcB	2.3.3.9	-	C	ko:K01638	ko00620,ko00630,ko01100,ko01110,ko01120,ko01200,map00620,map00630,map01100,map01110,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
LNEOGEMI_00391	1.18e-178	-	-	-	Q	-	-	-	Domain of unknown function (DUF2437)
LNEOGEMI_00392	1.97e-174	-	-	-	K	-	-	-	helix_turn_helix isocitrate lyase regulation
LNEOGEMI_00393	3.65e-63	-	-	-	-	-	-	-	-
LNEOGEMI_00394	2.59e-119	-	-	-	FG	-	-	-	Domain of unknown function (DUF4269)
LNEOGEMI_00396	1.48e-271	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LNEOGEMI_00398	3.58e-282	yuxJ	-	-	EGP	-	-	-	Major facilitator superfamily
LNEOGEMI_00399	8.11e-145	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LNEOGEMI_00401	1.62e-148	yneB	-	-	L	-	-	-	resolvase
LNEOGEMI_00402	2.51e-46	ynzC	-	-	S	-	-	-	UPF0291 protein
LNEOGEMI_00403	0.0	tkt	2.2.1.1	-	G	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LNEOGEMI_00404	5.21e-93	yneE	-	-	S	-	-	-	Sporulation inhibitor of replication protein sirA
LNEOGEMI_00405	8.21e-39	yneF	-	-	S	ko:K09976	-	ko00000	UPF0154 protein
LNEOGEMI_00406	0.0	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
LNEOGEMI_00407	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
LNEOGEMI_00408	2.41e-106	yneK	-	-	S	-	-	-	Protein of unknown function (DUF2621)
LNEOGEMI_00409	1.22e-19	-	-	-	-	-	-	-	-
LNEOGEMI_00411	0.0	citB	4.2.1.3	-	C	ko:K01681	ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
LNEOGEMI_00413	2.3e-06	-	-	-	S	-	-	-	Fur-regulated basic protein B
LNEOGEMI_00414	3.93e-17	sspN	-	-	S	ko:K06431	-	ko00000	Small acid-soluble spore protein N family
LNEOGEMI_00415	1.95e-175	-	-	-	P	ko:K07245	-	ko00000,ko02000	Copper resistance protein D
LNEOGEMI_00416	0.0	spoVK_1	-	-	O	-	-	-	stage V sporulation protein K
LNEOGEMI_00417	2.92e-98	yneP	-	-	S	ko:K07107	-	ko00000,ko01000	thioesterase
LNEOGEMI_00418	1.14e-194	nadE	6.3.1.5	-	H	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
LNEOGEMI_00419	4.8e-104	-	-	-	S	-	-	-	Domain of unknown function (DUF4352)
LNEOGEMI_00420	5.83e-230	metAA	2.3.1.46	-	E	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LNEOGEMI_00421	9.32e-189	-	-	-	I	-	-	-	Hydrolase
LNEOGEMI_00422	3.74e-303	ykuI	-	-	T	-	-	-	Diguanylate phosphodiesterase
LNEOGEMI_00423	7.35e-31	-	-	-	-	-	-	-	-
LNEOGEMI_00424	2.41e-42	-	-	-	S	-	-	-	YppG-like protein
LNEOGEMI_00425	3.03e-91	hspX	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
LNEOGEMI_00426	7.88e-215	-	3.4.13.19	-	E	ko:K01273	-	ko00000,ko00537,ko01000,ko01002,ko04147	COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog
LNEOGEMI_00427	4.7e-202	cheV	-	-	T	ko:K03408,ko:K03415	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko02022,ko02035	Chemotaxis protein CheV
LNEOGEMI_00429	7.87e-66	yneR	-	-	S	-	-	-	Belongs to the HesB IscA family
LNEOGEMI_00430	6.64e-114	msrA	1.8.4.11	-	O	ko:K07304	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LNEOGEMI_00431	8.19e-267	-	-	-	I	ko:K01066	-	ko00000,ko01000	COG0657 Esterase lipase
LNEOGEMI_00432	1.13e-57	-	-	-	S	-	-	-	DNA alkylation repair protein
LNEOGEMI_00433	7.16e-236	qoxA	1.10.3.12	-	C	ko:K02826	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I
LNEOGEMI_00434	0.0	qoxB	1.10.3.12	-	C	ko:K02827	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LNEOGEMI_00435	2.33e-142	qoxC	1.10.3.12	-	C	ko:K02828	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	quinol oxidase, subunit
LNEOGEMI_00436	2.19e-67	qoxD	1.10.3.12	-	C	ko:K02829	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	quinol oxidase, subunit
LNEOGEMI_00437	4.7e-57	ywcE	-	-	S	-	-	-	Required for proper spore morphogenesis. Important for spore germination
LNEOGEMI_00438	4.11e-52	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
LNEOGEMI_00439	2.92e-312	agcS	-	-	E	ko:K03310	-	ko00000	Sodium alanine symporter
LNEOGEMI_00440	1.69e-297	pepS	-	-	E	ko:K19689	-	ko00000,ko01000,ko01002	COG2309 Leucyl aminopeptidase (aminopeptidase T)
LNEOGEMI_00441	5.27e-161	queC	6.3.4.20	-	F	ko:K06920	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
LNEOGEMI_00442	7.73e-99	queD	4.1.2.50, 4.2.3.12	-	H	ko:K01737	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000,ko03016	synthase
LNEOGEMI_00443	6.34e-154	queE	4.3.99.3	-	H	ko:K10026	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
LNEOGEMI_00444	9.26e-123	queF	1.7.1.13	-	S	ko:K09457	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000,ko03016	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
LNEOGEMI_00445	3.83e-132	-	-	-	KT	ko:K02479	-	ko00000,ko02022	LuxR family transcriptional regulator
LNEOGEMI_00446	5.02e-237	-	-	-	T	-	-	-	Histidine kinase
LNEOGEMI_00447	3.2e-145	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 type transporter
LNEOGEMI_00448	5.97e-158	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 type transporter
LNEOGEMI_00449	3.78e-213	sagG	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	COG1131 ABC-type multidrug transport system, ATPase component
LNEOGEMI_00451	0.0	-	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LNEOGEMI_00452	2.17e-97	ymaD	-	-	O	-	-	-	redox protein, regulator of disulfide bond formation
LNEOGEMI_00454	2.16e-150	-	-	-	M	ko:K21471,ko:K21472	-	ko00000,ko01000,ko01002,ko01011	lytic transglycosylase activity
LNEOGEMI_00455	2.6e-233	-	-	-	Q	-	-	-	O-methyltransferase
LNEOGEMI_00457	0.0	odhA	1.2.4.2	-	C	ko:K00164	ko00020,ko00310,ko00380,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map00380,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components 2- oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3)
LNEOGEMI_00458	2.89e-251	odhB	2.3.1.61	-	C	ko:K00658	ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2)
LNEOGEMI_00459	9.15e-45	yozC	-	-	-	-	-	-	-
LNEOGEMI_00460	0.0	ykpA	-	-	S	-	-	-	COG0488 ATPase components of ABC transporters with duplicated ATPase domains
LNEOGEMI_00461	4.88e-197	yvgN	-	-	S	-	-	-	reductase
LNEOGEMI_00462	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	DNA helicase
LNEOGEMI_00463	7.34e-72	ytxJ	-	-	O	-	-	-	Protein of unknown function (DUF2847)
LNEOGEMI_00464	4.46e-118	yocC	-	-	-	-	-	-	-
LNEOGEMI_00465	2.08e-132	yokL3	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
LNEOGEMI_00466	2.96e-212	-	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	Helix-hairpin-helix class 2 (Pol1 family) motifs
LNEOGEMI_00467	1.15e-160	bshB2	-	-	S	ko:K22135	-	ko00000,ko01000	deacetylase
LNEOGEMI_00468	1.15e-79	yojF	-	-	S	-	-	-	Protein of unknown function (DUF1806)
LNEOGEMI_00469	3.8e-145	mucD	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LNEOGEMI_00470	2.16e-89	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2188)
LNEOGEMI_00472	6.71e-269	ydbM	-	-	I	-	-	-	acyl-CoA dehydrogenase
LNEOGEMI_00473	2.75e-292	-	-	-	S	-	-	-	membrane
LNEOGEMI_00474	1.12e-71	-	-	-	-	-	-	-	-
LNEOGEMI_00475	0.0	tagE6	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
LNEOGEMI_00476	6.95e-45	-	-	-	-	-	-	-	-
LNEOGEMI_00477	7.62e-120	-	-	-	S	-	-	-	DinB superfamily
LNEOGEMI_00478	1.1e-32	-	-	-	-	-	-	-	-
LNEOGEMI_00480	2.79e-171	ycsE	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sucrose-6F-phosphate phosphohydrolase
LNEOGEMI_00481	0.0	-	2.7.1.199, 2.7.1.208	-	G	ko:K02790,ko:K02791	ko00010,ko00500,ko00520,ko02060,map00010,map00500,map00520,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
LNEOGEMI_00482	0.0	-	4.3.2.2, 5.5.1.2	-	F	ko:K01756,ko:K01857	ko00230,ko00250,ko00362,ko01100,ko01110,ko01120,ko01130,ko01220,map00230,map00250,map00362,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko00002,ko01000	Adenylosuccinate lyase C-terminus
LNEOGEMI_00483	5.53e-159	-	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
LNEOGEMI_00484	1.04e-106	-	-	-	-	-	-	-	-
LNEOGEMI_00488	5.73e-23	-	-	-	-	-	-	-	-
LNEOGEMI_00490	0.0	nagE	2.7.1.193, 2.7.1.199	-	G	ko:K02803,ko:K02804,ko:K20116,ko:K20117,ko:K20118	ko00010,ko00520,ko02060,map00010,map00520,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG1263 Phosphotransferase system IIC components, glucose maltose N-acetylglucosamine-specific
LNEOGEMI_00491	7.68e-172	-	3.5.1.105	-	G	ko:K03478	-	ko00000,ko01000	Probably catalyzes the deacetylation of acetylated carbohydrates an important step in the degradation of oligosaccharides
LNEOGEMI_00492	1.96e-310	glvA	3.2.1.122	GH4	G	ko:K01232	ko00500,map00500	ko00000,ko00001,ko01000	COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
LNEOGEMI_00493	7.67e-162	-	-	-	K	ko:K11922	-	ko00000,ko03000	UTRA
LNEOGEMI_00494	7.66e-136	-	-	-	S	-	-	-	CAAX protease self-immunity
LNEOGEMI_00495	4.35e-153	-	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	COG3103 SH3 domain protein
LNEOGEMI_00496	8e-63	-	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	COG3103 SH3 domain protein
LNEOGEMI_00513	0.0	yobO	-	-	M	-	-	-	Pectate lyase superfamily protein
LNEOGEMI_00515	3.2e-235	-	-	-	S	-	-	-	Protein of unknown function (DUF3533)
LNEOGEMI_00516	1.54e-172	-	-	-	S	-	-	-	SnoaL-like domain
LNEOGEMI_00517	1.46e-119	-	-	-	K	-	-	-	Transcriptional regulator C-terminal region
LNEOGEMI_00518	3.97e-60	-	-	-	K	-	-	-	ArsR family transcriptional regulator
LNEOGEMI_00519	4.84e-252	ybcL	-	-	EGP	ko:K08164	-	ko00000,ko02000	COG2814 Arabinose efflux permease
LNEOGEMI_00520	0.0	yhjG	-	-	CH	-	-	-	FAD binding domain
LNEOGEMI_00521	8.69e-60	-	-	-	J	-	-	-	oxidation-reduction process
LNEOGEMI_00522	8.63e-102	yhjH	-	-	K	-	-	-	helix_turn_helix multiple antibiotic resistance protein
LNEOGEMI_00523	1.46e-217	-	-	-	S	-	-	-	thiolester hydrolase activity
LNEOGEMI_00524	2.36e-294	-	3.3.2.9	-	S	ko:K01253	ko00980,ko04976,ko05204,map00980,map04976,map05204	ko00000,ko00001,ko01000,ko01002	Epoxide hydrolase
LNEOGEMI_00526	4e-196	-	-	-	K	-	-	-	DNA-binding protein
LNEOGEMI_00527	3.57e-170	dltE3	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
LNEOGEMI_00528	5.33e-306	nox	1.11.1.1	-	P	ko:K05910	-	ko00000,ko01000	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
LNEOGEMI_00529	1.06e-131	-	-	-	K	-	-	-	Bacterial transcriptional repressor C-terminal
LNEOGEMI_00530	1.16e-45	-	-	-	M	-	-	-	Host cell surface-exposed lipoprotein
LNEOGEMI_00532	2.45e-39	-	-	-	E	-	-	-	lactoylglutathione lyase activity
LNEOGEMI_00533	7.44e-113	-	-	-	F	-	-	-	uridine kinase
LNEOGEMI_00534	5.42e-165	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
LNEOGEMI_00535	0.0	pbpE	-	-	V	-	-	-	Beta-lactamase
LNEOGEMI_00536	9.9e-57	-	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
LNEOGEMI_00537	2.05e-167	-	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
LNEOGEMI_00538	2.05e-159	-	-	-	S	-	-	-	Nucleotidyltransferase domain
LNEOGEMI_00539	4.41e-23	-	2.3.1.60	-	K	ko:K03395	-	br01600,ko00000,ko01000,ko01504	Acetyltransferase (GNAT) domain
LNEOGEMI_00540	3e-74	yvaF	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
LNEOGEMI_00541	8.96e-171	-	-	-	EGP	ko:K08167	-	ko00000,ko00002,ko01504,ko02000	PFAM major facilitator superfamily MFS_1
LNEOGEMI_00542	6.14e-185	cypA	-	-	Q	-	-	-	Cytochrome P450
LNEOGEMI_00543	6.65e-203	-	-	-	K	-	-	-	AraC-like ligand binding domain
LNEOGEMI_00544	0.0	lacZ	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	beta-galactosidase
LNEOGEMI_00545	0.0	-	-	-	G	-	-	-	alpha-L-rhamnosidase
LNEOGEMI_00546	0.0	-	-	-	K	-	-	-	Mga helix-turn-helix domain
LNEOGEMI_00547	1.31e-267	-	3.5.2.3	-	S	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	amidohydrolase
LNEOGEMI_00548	4.99e-63	-	-	-	S	-	-	-	PRD domain
LNEOGEMI_00549	1.81e-77	-	-	-	S	-	-	-	Glycine-rich SFCGS
LNEOGEMI_00550	2.49e-77	-	-	-	S	-	-	-	Domain of unknown function (DUF4312)
LNEOGEMI_00551	2.68e-178	-	-	-	S	-	-	-	Domain of unknown function (DUF4311)
LNEOGEMI_00552	8.24e-146	-	-	-	S	-	-	-	Domain of unknown function (DUF4310)
LNEOGEMI_00553	3.14e-255	selA	2.9.1.1	-	E	ko:K01042	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko01000	L-seryl-tRNA selenium transferase
LNEOGEMI_00554	8.28e-162	-	4.1.2.14	-	S	ko:K17463	ko00030,ko01100,ko01120,map00030,map01100,map01120	ko00000,ko00001,ko00002,ko01000	KDGP aldolase
LNEOGEMI_00555	2.19e-88	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
LNEOGEMI_00556	3.14e-228	scrA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
LNEOGEMI_00557	7.56e-236	scrB	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
LNEOGEMI_00558	4.24e-65	scrR	-	-	K	ko:K02529,ko:K03484	-	ko00000,ko03000	Transcriptional regulator, LacI family
LNEOGEMI_00559	1.09e-114	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
LNEOGEMI_00560	2.05e-197	-	-	-	G	-	-	-	domain, Protein
LNEOGEMI_00561	1.06e-149	yvrH	-	-	T	-	-	-	Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LNEOGEMI_00562	4.25e-192	yvrG	-	-	T	-	-	-	Histidine kinase
LNEOGEMI_00563	3.28e-150	ccmA3	-	-	V	ko:K20459	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacitracin ABC transporter ATP-binding protein
LNEOGEMI_00564	9.24e-136	-	-	-	S	ko:K20460	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-2 family transporter protein
LNEOGEMI_00565	1.63e-139	mrsE3	-	-	S	ko:K20461	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC-2 family transporter protein
LNEOGEMI_00566	6.08e-151	-	-	-	S	-	-	-	3-demethylubiquinone-9 3-methyltransferase
LNEOGEMI_00567	7.89e-142	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 type transporter
LNEOGEMI_00568	1.18e-168	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	AAA domain, putative AbiEii toxin, Type IV TA system
LNEOGEMI_00569	3.6e-147	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
LNEOGEMI_00570	1.34e-179	-	3.5.3.1	-	E	ko:K01476	ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146	ko00000,ko00001,ko00002,ko01000	Arginase agmatinase formimionoglutamate hydrolase, arginase family
LNEOGEMI_00571	1.04e-76	ydzF	-	-	K	-	-	-	HxlR-like helix-turn-helix
LNEOGEMI_00572	1.54e-81	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
LNEOGEMI_00573	1.25e-76	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
LNEOGEMI_00574	1.87e-182	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
LNEOGEMI_00577	5.75e-90	-	-	-	K	-	-	-	Helix-turn-helix domain
LNEOGEMI_00578	5.87e-185	-	-	-	S	-	-	-	Alpha beta hydrolase
LNEOGEMI_00579	2.97e-28	-	-	-	T	-	-	-	Histidine kinase
LNEOGEMI_00580	3e-290	serS3	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LNEOGEMI_00581	1.23e-160	-	-	-	L	-	-	-	DNA alkylation repair enzyme
LNEOGEMI_00582	5.45e-146	-	-	-	S	-	-	-	AAA domain
LNEOGEMI_00583	2.7e-118	-	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Phosphoglycerate mutase family
LNEOGEMI_00584	5.71e-245	-	-	-	T	-	-	-	Signal transduction histidine kinase
LNEOGEMI_00585	1.38e-137	-	-	-	KT	-	-	-	LuxR family transcriptional regulator
LNEOGEMI_00586	6.26e-218	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	COG1131 ABC-type multidrug transport system, ATPase component
LNEOGEMI_00587	1.16e-271	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
LNEOGEMI_00588	2.41e-240	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 type transporter
LNEOGEMI_00589	1.26e-184	gspA	-	-	M	-	-	-	Glycosyl transferase family 8
LNEOGEMI_00590	1.08e-83	yxjI	-	-	S	-	-	-	LURP-one-related
LNEOGEMI_00591	1.08e-188	adcA	-	-	P	ko:K09815,ko:K09818	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
LNEOGEMI_00592	2.68e-161	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
LNEOGEMI_00593	5.26e-123	p20	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
LNEOGEMI_00594	3.13e-62	-	-	-	-	-	-	-	-
LNEOGEMI_00595	1.51e-132	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
LNEOGEMI_00596	0.0	-	-	-	P	ko:K06901	-	ko00000,ko02000	secondary active sulfate transmembrane transporter activity
LNEOGEMI_00597	0.0	yfkN	3.1.3.5, 3.1.3.6, 3.1.4.16	-	F	ko:K01081,ko:K06931,ko:K08693	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
LNEOGEMI_00598	8.39e-75	-	-	-	S	-	-	-	Regulatory protein YrvL
LNEOGEMI_00599	1.1e-232	yccF	-	-	K	ko:K07039	-	ko00000	SEC-C motif
LNEOGEMI_00600	0.0	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LNEOGEMI_00601	1.74e-82	-	3.2.1.96	-	G	ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
LNEOGEMI_00602	1.4e-206	-	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
LNEOGEMI_00603	0.0	-	-	-	M	-	-	-	Glycosyltransferase like family 2
LNEOGEMI_00604	0.0	-	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
LNEOGEMI_00605	7.06e-93	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Cytidylyltransferase
LNEOGEMI_00606	7.68e-173	-	-	-	I	-	-	-	CDP-alcohol phosphatidyltransferase
LNEOGEMI_00607	3.35e-292	tagF	2.7.8.12	-	M	ko:K09809	-	ko00000,ko01000	glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
LNEOGEMI_00608	0.0	tuaA	-	-	M	-	-	-	COG2148 Sugar transferases involved in lipopolysaccharide synthesis
LNEOGEMI_00609	5.17e-249	-	-	-	M	-	-	-	Glycosyltransferase like family 2
LNEOGEMI_00610	2.74e-167	-	-	-	E	-	-	-	lipolytic protein G-D-S-L family
LNEOGEMI_00611	4.03e-83	nrdI	-	-	F	ko:K03647	-	ko00000	Probably involved in ribonucleotide reductase function
LNEOGEMI_00612	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LNEOGEMI_00613	3.1e-246	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LNEOGEMI_00614	6.94e-146	ymaB	-	-	S	-	-	-	MutT family
LNEOGEMI_00615	6.86e-126	pncA	-	-	Q	-	-	-	COG1335 Amidases related to nicotinamidase
LNEOGEMI_00616	2.24e-37	-	-	-	-	-	-	-	-
LNEOGEMI_00617	7.15e-280	yaaH	-	-	M	ko:K06306	-	ko00000	Glycoside Hydrolase Family
LNEOGEMI_00618	9.95e-165	fabG9	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
LNEOGEMI_00619	0.0	cscA	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
LNEOGEMI_00620	0.0	-	3.2.1.80	-	G	ko:K03332	ko00051,map00051	ko00000,ko00001,ko01000	invertase
LNEOGEMI_00621	0.0	-	-	-	G	ko:K17318	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
LNEOGEMI_00622	1.15e-206	lplC7	-	-	G	ko:K17320	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0395 ABC-type sugar transport system, permease component
LNEOGEMI_00623	6.8e-224	-	-	-	G	ko:K17319	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG4209 ABC-type polysaccharide transport system, permease component
LNEOGEMI_00624	3.84e-233	scrR	-	-	K	ko:K02529,ko:K03484	-	ko00000,ko03000	transcriptional
LNEOGEMI_00626	1.79e-131	-	-	-	-	-	-	-	-
LNEOGEMI_00627	9.03e-256	-	-	-	E	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
LNEOGEMI_00628	1.39e-200	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_00629	2.42e-206	-	-	-	G	ko:K02025,ko:K17238	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_00630	2.98e-315	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
LNEOGEMI_00631	0.0	-	3.2.1.52	-	G	ko:K01207	ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501	ko00000,ko00001,ko00002,ko01000	Belongs to the glycosyl hydrolase 3 family
LNEOGEMI_00632	2.95e-29	-	-	-	K	-	-	-	sequence-specific DNA binding
LNEOGEMI_00633	8.83e-69	-	-	-	K	-	-	-	sequence-specific DNA binding
LNEOGEMI_00634	3.74e-204	-	-	-	S	-	-	-	NYN domain
LNEOGEMI_00635	1.1e-156	-	-	-	-	-	-	-	-
LNEOGEMI_00637	1.24e-81	-	-	-	K	-	-	-	helix_turn_helix gluconate operon transcriptional repressor
LNEOGEMI_00638	2.21e-157	yhcG	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
LNEOGEMI_00639	6.89e-171	-	-	-	-	-	-	-	-
LNEOGEMI_00642	4.69e-28	-	-	-	K	ko:K07729,ko:K20388	ko02024,map02024	ko00000,ko00001,ko03000	sequence-specific DNA binding
LNEOGEMI_00643	1.33e-140	-	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	2-dehydro-3-deoxy-phosphogluconate aldolase
LNEOGEMI_00644	1.15e-179	-	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
LNEOGEMI_00645	2.08e-112	-	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_00646	8.19e-143	yrzF	-	-	KLT	-	-	-	serine threonine protein kinase
LNEOGEMI_00647	6.45e-12	-	-	-	-	-	-	-	-
LNEOGEMI_00648	3.77e-52	-	-	-	-	-	-	-	-
LNEOGEMI_00649	7.52e-263	yhcY	2.7.13.3	-	T	ko:K02480	-	ko00000,ko01000,ko01001,ko02022	Histidine kinase
LNEOGEMI_00650	3.12e-145	yhcZ	-	-	K	ko:K02479	-	ko00000,ko02022	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
LNEOGEMI_00652	1.77e-235	-	2.4.99.17	-	J	ko:K07568	-	ko00000,ko01000,ko03016	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
LNEOGEMI_00653	1.67e-161	-	-	-	IQ	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
LNEOGEMI_00654	5.82e-130	-	-	-	S	-	-	-	Bacteriocin-protection, YdeI or OmpD-Associated
LNEOGEMI_00655	5.27e-207	yobV	-	-	K	-	-	-	WYL domain
LNEOGEMI_00656	2.01e-113	dinB	-	-	S	-	-	-	DinB family
LNEOGEMI_00657	6.12e-190	yxeH	-	-	S	-	-	-	hydrolases of the HAD superfamily
LNEOGEMI_00658	1.86e-218	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LNEOGEMI_00659	1.42e-269	-	1.1.1.18, 1.1.1.369	-	S	ko:K00010	ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130	ko00000,ko00001,ko01000	Oxidoreductase family, NAD-binding Rossmann fold
LNEOGEMI_00660	9.99e-216	alkA	3.2.2.21	-	L	ko:K01247,ko:K13529	ko03410,map03410	ko00000,ko00001,ko01000,ko03000,ko03400	COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
LNEOGEMI_00661	5.19e-138	adaA	-	-	K	ko:K13530	-	ko00000,ko01000,ko03000,ko03400	Transcriptional regulator
LNEOGEMI_00662	9.42e-122	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LNEOGEMI_00663	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 2 family
LNEOGEMI_00664	1.02e-91	-	-	-	K	ko:K22293	-	ko00000,ko03000	FCD
LNEOGEMI_00665	1.09e-145	-	-	-	S	-	-	-	Oxidoreductase family, C-terminal alpha/beta domain
LNEOGEMI_00666	1.59e-139	-	-	-	G	-	-	-	COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component
LNEOGEMI_00667	1.57e-55	-	-	-	G	-	-	-	Tripartite ATP-independent periplasmic transporters, DctQ component
LNEOGEMI_00668	8.36e-223	-	-	-	G	-	-	-	C4-dicarboxylate ABC transporter permease
LNEOGEMI_00670	5.45e-128	-	-	-	G	-	-	-	Xylose isomerase-like TIM barrel
LNEOGEMI_00671	9.34e-139	-	2.3.3.1	-	C	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Citrate synthase, C-terminal domain
LNEOGEMI_00672	2.77e-230	-	-	-	C	-	-	-	Belongs to the aldehyde dehydrogenase family
LNEOGEMI_00673	2.2e-139	-	1.1.1.14	-	E	ko:K00008	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko00002,ko01000	Alcohol dehydrogenase GroES-like domain
LNEOGEMI_00674	0.0	-	2.2.1.6	-	EH	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Thiamine pyrophosphate enzyme, central domain
LNEOGEMI_00675	1e-242	-	-	-	C	-	-	-	acyl-CoA transferases carnitine dehydratase
LNEOGEMI_00676	2.68e-71	-	-	-	S	-	-	-	ASCH
LNEOGEMI_00677	4.01e-100	nsrR	-	-	K	ko:K13771	ko05132,map05132	ko00000,ko00001,ko03000	Transcriptional regulator
LNEOGEMI_00678	3.22e-69	-	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
LNEOGEMI_00679	1.69e-232	cbrA5	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Ferrichrome ABC transporter substrate-binding protein
LNEOGEMI_00680	0.0	fhuB5	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LNEOGEMI_00681	3.65e-173	-	-	-	P	ko:K02049	-	ko00000,ko00002,ko02000	COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component
LNEOGEMI_00682	5.82e-192	-	-	-	P	ko:K02050,ko:K15552	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_00683	9.37e-241	-	-	-	P	-	-	-	NMT1-like family
LNEOGEMI_00685	6.29e-179	-	-	-	P	ko:K02049,ko:K15555	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component
LNEOGEMI_00686	7.26e-185	-	-	-	P	ko:K02050	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_00687	7.16e-232	-	-	-	P	-	-	-	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components
LNEOGEMI_00688	6.78e-225	pucA	1.17.1.4	-	O	ko:K00087,ko:K07402	ko00230,ko01100,ko01120,map00230,map01100,map01120	ko00000,ko00001,ko00002,ko01000	COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
LNEOGEMI_00689	4.28e-129	pucB	1.17.1.4, 2.7.7.76	-	S	ko:K00087,ko:K07141	ko00230,ko00790,ko01100,ko01120,map00230,map00790,map01100,map01120	ko00000,ko00001,ko00002,ko01000	MobA-like NTP transferase domain
LNEOGEMI_00690	1.15e-202	pucC	1.17.1.4, 1.2.5.3	-	C	ko:K00087,ko:K03519	ko00230,ko01100,ko01120,map00230,map01100,map01120	ko00000,ko00001,ko00002,ko01000	COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM CutM homologs
LNEOGEMI_00691	0.0	pucD	1.17.1.4	-	C	ko:K00087	ko00230,ko01100,ko01120,map00230,map01100,map01120	ko00000,ko00001,ko00002,ko01000	COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs
LNEOGEMI_00692	2.44e-111	-	1.17.1.4, 1.2.5.3	-	C	ko:K00087,ko:K03518	ko00230,ko01100,ko01120,map00230,map01100,map01120	ko00000,ko00001,ko00002,ko01000	COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs
LNEOGEMI_00693	1.04e-309	pucG	2.6.1.112, 2.6.1.44, 2.6.1.45, 2.6.1.51	-	E	ko:K00830,ko:K00839	ko00230,ko00250,ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko04146,map00230,map00250,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map04146	ko00000,ko00001,ko00002,ko01000,ko01007	COG0075 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase
LNEOGEMI_00694	4.42e-289	pucF	3.5.3.9	-	E	ko:K02083	ko00230,ko01120,map00230,map01120	ko00000,ko00001,ko01000,ko01002	COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases
LNEOGEMI_00695	0.0	pucR	-	-	QT	ko:K09684	-	ko00000,ko03000	COG2508 Regulator of polyketide synthase expression
LNEOGEMI_00696	1.92e-113	-	-	-	S	-	-	-	OHCU decarboxylase
LNEOGEMI_00697	1.19e-224	-	1.7.3.3, 4.1.1.97	-	Q	ko:K16838	ko00230,ko00232,ko01100,ko01120,map00230,map00232,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of uric acid to 5- hydroxyisourate, which is further processed to form (S)-allantoin
LNEOGEMI_00698	3.78e-74	pucM	3.5.2.17	-	S	ko:K07127	ko00230,ko01100,ko01120,map00230,map01100,map01120	ko00000,ko00001,ko00002,ko01000,ko02000	Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily
LNEOGEMI_00699	0.0	-	-	-	S	-	-	-	Membrane
LNEOGEMI_00700	2.29e-308	allB	3.5.2.5	-	F	ko:K01466	ko00230,ko01100,ko01120,map00230,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of allantoin (5- ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring
LNEOGEMI_00701	8.24e-271	-	3.5.1.4	-	J	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	ko00000,ko00001,ko01000	Belongs to the amidase family
LNEOGEMI_00703	1.24e-177	yqjF	-	-	S	ko:K09166	-	ko00000	Uncharacterized conserved protein (COG2071)
LNEOGEMI_00704	3.03e-63	ycbP	-	-	S	-	-	-	Protein of unknown function (DUF2512)
LNEOGEMI_00705	4.71e-119	yvdQ	-	-	S	-	-	-	Protein of unknown function (DUF3231)
LNEOGEMI_00706	2.66e-290	-	-	-	S	-	-	-	Putative esterase
LNEOGEMI_00707	7.08e-196	tetM	-	-	J	ko:K18220	-	br01600,ko00000,ko01504	Elongation factor G, domain IV
LNEOGEMI_00708	6.67e-225	-	-	-	L	ko:K07496	-	ko00000	Transposase
LNEOGEMI_00709	1.19e-103	-	-	-	GM	-	-	-	NAD dependent epimerase/dehydratase family
LNEOGEMI_00710	2.6e-103	-	-	-	GM	-	-	-	NAD dependent epimerase/dehydratase family
LNEOGEMI_00711	5.43e-181	-	-	-	S	-	-	-	Alpha/beta hydrolase family
LNEOGEMI_00712	1.78e-118	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
LNEOGEMI_00713	6.37e-191	punA	2.4.2.1, 2.4.2.28	-	F	ko:K00772,ko:K03783	ko00230,ko00240,ko00270,ko00760,ko01100,ko01110,map00230,map00240,map00270,map00760,map01100,map01110	ko00000,ko00001,ko00002,ko01000	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
LNEOGEMI_00714	6.97e-219	-	2.7.1.194	-	GKT	ko:K02821,ko:K03483	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000,ko03000	COG3711 Transcriptional antiterminator
LNEOGEMI_00715	4.17e-42	-	2.7.1.194	-	G	ko:K02822	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
LNEOGEMI_00716	1.64e-229	ulaA	-	-	S	ko:K03475	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	PTS system ascorbate-specific transporter subunit IIC
LNEOGEMI_00717	2.58e-108	-	-	-	G	ko:K17195	ko00051,ko01120,map00051,map01120	ko00000,ko00001,ko01000	Ribulose-phosphate 3 epimerase family
LNEOGEMI_00718	8.19e-162	ssuB	-	-	P	ko:K02049,ko:K15555	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system
LNEOGEMI_00719	2.12e-177	ssuC	-	-	P	ko:K15554	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component
LNEOGEMI_00720	4.1e-237	-	-	-	P	ko:K02051,ko:K15553	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
LNEOGEMI_00721	4.59e-203	-	-	-	E	-	-	-	Glyoxalase-like domain
LNEOGEMI_00722	1.38e-175	-	-	-	G	-	-	-	Phosphoenolpyruvate phosphomutase
LNEOGEMI_00723	1.42e-131	yvaZ	-	-	S	-	-	-	Immunity protein that provides protection for the cell against the toxic effects of SDP, its own SdpC-derived killing factor, and that functions as a receptor signal transduction protein as well. Once SDP accumulates in the extracellular milieu, SdpI binds to SDP, causing sequestration of SdpR at the bacterial membrane
LNEOGEMI_00724	7.93e-59	sdpR	-	-	K	-	-	-	transcriptional
LNEOGEMI_00725	2.12e-197	-	-	-	K	-	-	-	LysR substrate binding domain
LNEOGEMI_00726	1.14e-150	mdmC1	-	-	S	-	-	-	O-methyltransferase
LNEOGEMI_00727	0.0	yrbD	-	-	E	ko:K03310	-	ko00000	Sodium alanine symporter
LNEOGEMI_00728	3.11e-166	ycdF	1.1.1.47	-	IQ	ko:K00034	ko00030,ko01120,ko01200,map00030,map01120,map01200	ko00000,ko00001,ko01000	Short-chain dehydrogenase reductase sdr
LNEOGEMI_00729	1.22e-100	-	-	-	S	-	-	-	Bacterial PH domain
LNEOGEMI_00730	2.12e-23	-	-	-	S	-	-	-	Family of unknown function (DUF5344)
LNEOGEMI_00731	1.27e-59	-	-	-	S	-	-	-	LXG domain of WXG superfamily
LNEOGEMI_00737	7.57e-59	-	-	-	-	-	-	-	-
LNEOGEMI_00738	1.34e-40	-	-	-	S	-	-	-	Domain of unknown function (DUF5082)
LNEOGEMI_00739	2.73e-134	-	-	-	K	ko:K16137	-	ko00000,ko03000	Bacterial regulatory proteins, tetR family
LNEOGEMI_00740	3.81e-253	-	-	-	C	-	-	-	NADH:flavin oxidoreductase / NADH oxidase family
LNEOGEMI_00741	0.0	gerAA	-	-	EG	ko:K06288,ko:K06310	-	ko00000	Spore germination protein
LNEOGEMI_00742	2.98e-232	gerAB	-	-	E	ko:K06289,ko:K06292	-	ko00000,ko02000	Spore germination protein
LNEOGEMI_00743	4.29e-255	gerAC	-	-	S	ko:K06290,ko:K06293,ko:K06312	-	ko00000	Spore germination B3/ GerAC like, C-terminal
LNEOGEMI_00744	2.85e-232	rapA	-	-	S	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	ko00000,ko00001,ko01000	Response regulator aspartate phosphatase
LNEOGEMI_00747	6.06e-184	hag	-	-	N	ko:K02406	ko02020,ko02040,ko04621,ko04626,ko05132,ko05134,map02020,map02040,map04621,map04626,map05132,map05134	ko00000,ko00001,ko02035	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
LNEOGEMI_00748	1.5e-198	-	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
LNEOGEMI_00749	3.49e-98	-	-	-	M	-	-	-	Bacterial sugar transferase
LNEOGEMI_00750	3.78e-178	fcl	1.1.1.271	-	GM	ko:K02377	ko00051,ko00520,ko01100,map00051,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction
LNEOGEMI_00751	1.51e-213	gmd	4.2.1.47	-	M	ko:K01711	ko00051,ko00520,ko01100,map00051,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
LNEOGEMI_00752	1.7e-37	-	-	-	M	-	-	-	PFAM Glycosyl transferase, group 1
LNEOGEMI_00753	9.66e-149	wgaD	-	-	S	-	-	-	slime layer polysaccharide biosynthetic process
LNEOGEMI_00755	2.39e-70	-	-	-	M	-	-	-	Glycosyl transferase, family 2
LNEOGEMI_00756	1.66e-58	-	-	-	M	-	-	-	PFAM O-Antigen ligase
LNEOGEMI_00757	4.65e-181	-	-	-	M	-	-	-	Glycosyl transferases group 1
LNEOGEMI_00758	7.41e-273	-	2.7.7.13	-	G	ko:K00971	ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110	ko00000,ko00001,ko00002,ko01000	mannose-1-phosphate guanylyltransferase
LNEOGEMI_00759	5.22e-310	-	1.1.1.22	-	M	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
LNEOGEMI_00760	6.77e-48	-	-	-	S	-	-	-	Domain of unknown function (DUF3784)
LNEOGEMI_00761	4.79e-95	ctsR	-	-	K	ko:K03708	-	ko00000,ko03000	Belongs to the CtsR family
LNEOGEMI_00762	1.2e-121	mcsA	-	-	S	ko:K19411	-	ko00000	protein with conserved CXXC pairs
LNEOGEMI_00763	1.88e-250	mcsB	2.7.14.1	-	E	ko:K19405	-	ko00000,ko01000	Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity
LNEOGEMI_00764	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Belongs to the ClpA ClpB family
LNEOGEMI_00765	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
LNEOGEMI_00766	4.09e-249	disA	2.7.7.85	-	L	ko:K07067	-	ko00000,ko01000	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
LNEOGEMI_00767	5.61e-252	yacL	-	-	S	-	-	-	COG4956 Integral membrane protein (PIN domain superfamily)
LNEOGEMI_00768	1.13e-150	ispD	2.7.7.60	-	I	ko:K00991	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
LNEOGEMI_00769	1.49e-107	ispF	2.7.7.60, 4.6.1.12	-	I	ko:K01770,ko:K12506	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
LNEOGEMI_00770	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LNEOGEMI_00771	1.98e-156	cysE	2.3.1.30	-	E	ko:K00640	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	ko00000,ko00001,ko00002,ko01000	Serine acetyltransferase
LNEOGEMI_00772	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
LNEOGEMI_00773	8.52e-91	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
LNEOGEMI_00774	3.82e-184	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LNEOGEMI_00775	5.28e-111	yacP	-	-	S	ko:K06962	-	ko00000	RNA-binding protein containing a PIN domain
LNEOGEMI_00776	9.77e-152	comX	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	Belongs to the sigma-70 factor family
LNEOGEMI_00777	2.37e-34	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
LNEOGEMI_00778	1.83e-124	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
LNEOGEMI_00779	1.19e-93	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LNEOGEMI_00780	4.64e-160	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
LNEOGEMI_00781	4.9e-105	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LNEOGEMI_00782	1.27e-69	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
LNEOGEMI_00783	2.91e-148	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
LNEOGEMI_00784	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LNEOGEMI_00785	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LNEOGEMI_00786	3.72e-47	rplGB	-	-	J	ko:K07590	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the eukaryotic ribosomal protein eL8 family
LNEOGEMI_00787	4.33e-95	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LNEOGEMI_00788	1.19e-107	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
LNEOGEMI_00789	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
LNEOGEMI_00790	6.72e-286	tuf	-	-	J	ko:K02358	-	ko00000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LNEOGEMI_00791	2.58e-65	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
LNEOGEMI_00792	9.49e-143	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LNEOGEMI_00793	2.22e-137	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
LNEOGEMI_00794	1.38e-59	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
LNEOGEMI_00795	5.09e-200	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
LNEOGEMI_00796	1.53e-61	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LNEOGEMI_00797	8.5e-72	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
LNEOGEMI_00798	1.76e-154	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LNEOGEMI_00799	3.79e-101	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LNEOGEMI_00800	5.12e-38	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
LNEOGEMI_00801	2.17e-52	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LNEOGEMI_00802	3.62e-79	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
LNEOGEMI_00803	7.7e-67	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
LNEOGEMI_00804	2.21e-121	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
LNEOGEMI_00805	1.54e-87	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
LNEOGEMI_00806	1.83e-124	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
LNEOGEMI_00807	8.96e-79	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
LNEOGEMI_00808	1.59e-110	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
LNEOGEMI_00809	7.06e-36	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
LNEOGEMI_00810	9.26e-98	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	binds to the 23S rRNA
LNEOGEMI_00811	1.39e-296	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
LNEOGEMI_00812	7.76e-152	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
LNEOGEMI_00813	1.1e-180	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine aminopeptidase
LNEOGEMI_00814	4.15e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LNEOGEMI_00815	5.99e-20	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
LNEOGEMI_00816	8.92e-75	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
LNEOGEMI_00817	4.05e-85	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
LNEOGEMI_00818	4.06e-216	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LNEOGEMI_00819	1.49e-77	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
LNEOGEMI_00820	1.57e-201	cbiO	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LNEOGEMI_00821	1.42e-184	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LNEOGEMI_00822	1.77e-169	ecfT	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LNEOGEMI_00823	6.89e-186	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
LNEOGEMI_00824	2.77e-103	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LNEOGEMI_00825	4.45e-86	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
LNEOGEMI_00826	1.54e-106	-	-	-	S	-	-	-	Protein of unknown function (DUF2975)
LNEOGEMI_00827	1.26e-40	yozG	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
LNEOGEMI_00829	1.05e-90	ykkB	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
LNEOGEMI_00830	4.26e-104	ybaK	-	-	S	-	-	-	Protein of unknown function (DUF2521)
LNEOGEMI_00831	3.02e-171	cwlD	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	n-acetylmuramoyl-L-alanine amidase
LNEOGEMI_00832	8.39e-196	glcT	-	-	K	ko:K03480,ko:K03488	-	ko00000,ko03000	antiterminator
LNEOGEMI_00833	0.0	ptsG	2.7.1.199	-	G	ko:K02763,ko:K02764,ko:K02765,ko:K20116,ko:K20117,ko:K20118	ko00010,ko00520,ko02060,map00010,map00520,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
LNEOGEMI_00834	2.18e-245	mrp	-	-	D	ko:K03593	-	ko00000,ko03029,ko03036	Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
LNEOGEMI_00835	2.04e-28	lacF	2.7.1.196, 2.7.1.205, 2.7.1.207	-	G	ko:K02759,ko:K02786	ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
LNEOGEMI_00836	6.63e-96	nanE	5.1.3.9	-	G	ko:K01788	ko00520,map00520	ko00000,ko00001,ko01000	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
LNEOGEMI_00837	1.67e-40	-	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PFAM Phosphotransferase system, lactose cellobiose-specific IIB subunit
LNEOGEMI_00838	8.66e-223	-	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LNEOGEMI_00839	3.88e-91	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
LNEOGEMI_00840	4.89e-212	-	-	-	S	-	-	-	Protein of unknown function (DUF4127)
LNEOGEMI_00841	3.18e-119	-	-	-	K	-	-	-	transcriptional regulator, RpiR family
LNEOGEMI_00842	6.68e-96	gerD	-	-	S	ko:K06294	-	ko00000	Spore gernimation protein
LNEOGEMI_00843	8e-130	kbaA	-	-	S	ko:K06349	-	ko00000	Involved in the activation of the KinB signaling pathway of sporulation
LNEOGEMI_00844	8.38e-183	pdaB	-	-	G	-	-	-	Polysaccharide deacetylase
LNEOGEMI_00845	5.74e-46	-	-	-	-	-	-	-	-
LNEOGEMI_00846	1.22e-216	-	-	-	IQ	-	-	-	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
LNEOGEMI_00847	6.68e-214	-	-	-	K	-	-	-	WYL domain
LNEOGEMI_00848	8.12e-144	-	1.15.1.1	-	P	ko:K04565	ko04146,ko04213,ko05014,ko05016,ko05020,map04146,map04213,map05014,map05016,map05020	ko00000,ko00001,ko01000	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LNEOGEMI_00849	1.44e-195	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LNEOGEMI_00850	1.03e-194	czcD	-	-	P	ko:K16264	-	ko00000,ko02000	COG1230 Co Zn Cd efflux system component
LNEOGEMI_00851	4.85e-65	czrA	-	-	K	ko:K22043	-	ko00000,ko03000	transcriptional
LNEOGEMI_00852	5.09e-208	gltC	-	-	K	ko:K09681	-	ko00000,ko03000	Transcriptional regulator
LNEOGEMI_00853	0.0	gdhA	1.4.1.2, 1.4.1.4	-	E	ko:K00260,ko:K00262	ko00220,ko00250,ko00430,ko00910,ko01100,map00220,map00250,map00430,map00910,map01100	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
LNEOGEMI_00854	4.44e-175	ssuC	-	-	P	ko:K15554	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component
LNEOGEMI_00855	7.25e-215	-	-	-	P	ko:K02051,ko:K15553	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
LNEOGEMI_00856	1.73e-254	-	1.14.14.28, 1.14.14.5	-	C	ko:K04091,ko:K20938	ko00920,map00920	ko00000,ko00001,ko01000	Catalyzes the desulfonation of aliphatic sulfonates
LNEOGEMI_00857	1.17e-170	ssuB	-	-	P	ko:K02049,ko:K15555	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system
LNEOGEMI_00858	2.42e-72	-	-	-	S	-	-	-	Dinitrogenase iron-molybdenum cofactor
LNEOGEMI_00859	1.09e-308	yxeK	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LNEOGEMI_00860	7.82e-107	ssuE	1.5.1.38	-	S	ko:K00299	ko00740,ko00920,ko01100,map00740,map00920,map01100	ko00000,ko00001,ko01000	FMN reductase
LNEOGEMI_00861	1.15e-203	ytlI3	-	-	K	ko:K21960	-	ko00000,ko03000	LysR substrate binding domain
LNEOGEMI_00862	5.74e-111	ypmQ	-	-	S	ko:K07152	-	ko00000,ko03029	protein SCO1 SenC PrrC, involved in biogenesis of respiratory and photosynthetic systems
LNEOGEMI_00863	5.43e-156	-	-	-	S	-	-	-	membrane
LNEOGEMI_00864	1.03e-37	-	-	-	S	-	-	-	spore protein
LNEOGEMI_00865	3.08e-39	-	-	-	S	ko:K06418,ko:K06419	-	ko00000	spore protein
LNEOGEMI_00866	0.0	swrC	-	-	V	ko:K03296	-	ko00000	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LNEOGEMI_00868	4.62e-194	yerO	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_00869	1e-158	-	-	-	-	-	-	-	-
LNEOGEMI_00870	1.46e-207	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
LNEOGEMI_00871	2.55e-79	-	-	-	K	-	-	-	helix_turn_helix gluconate operon transcriptional repressor
LNEOGEMI_00872	8.43e-141	-	-	-	Q	-	-	-	Methyltransferase domain
LNEOGEMI_00873	3.42e-181	hemD	4.2.1.75	-	H	ko:K01719	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Uroporphyrinogen-III synthase
LNEOGEMI_00874	2.54e-10	-	-	-	-	-	-	-	-
LNEOGEMI_00875	3.78e-76	-	-	-	-	-	-	-	-
LNEOGEMI_00877	1.24e-186	ykrA	-	-	S	-	-	-	hydrolases of the HAD superfamily
LNEOGEMI_00878	3.94e-41	-	-	-	-	-	-	-	-
LNEOGEMI_00879	6.7e-62	csoR	-	-	S	ko:K21600	-	ko00000,ko03000	transcriptional
LNEOGEMI_00880	1.35e-38	copZ	-	-	P	ko:K07213	ko04978,map04978	ko00000,ko00001	Heavy-metal-associated domain
LNEOGEMI_00881	4.66e-128	-	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
LNEOGEMI_00883	3.34e-244	-	-	-	C	-	-	-	Catalyzes the reduction of the double bond of an array of alpha,beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes
LNEOGEMI_00884	9.3e-275	-	-	-	E	-	-	-	Peptidase family M28
LNEOGEMI_00885	1.7e-134	yhfK	-	-	GM	-	-	-	NmrA-like family
LNEOGEMI_00886	1.57e-227	ytvI	-	-	S	-	-	-	AI-2E family transporter
LNEOGEMI_00887	2.69e-117	copC	-	-	S	ko:K07156	-	ko00000,ko02000	CopC domain
LNEOGEMI_00889	3.35e-248	yhdY	-	-	M	ko:K16052	-	ko00000,ko02000	Mechanosensitive ion channel
LNEOGEMI_00890	1.62e-232	-	-	-	T	-	-	-	Metal dependent phosphohydrolases with conserved 'HD' motif.
LNEOGEMI_00891	5.05e-186	-	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
LNEOGEMI_00892	5.61e-115	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
LNEOGEMI_00893	5.51e-282	-	2.6.1.11, 2.6.1.17	-	E	ko:K00821	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase class-III
LNEOGEMI_00894	6.04e-271	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
LNEOGEMI_00895	1.46e-50	ykuS	-	-	S	-	-	-	Belongs to the UPF0180 family
LNEOGEMI_00896	3.29e-163	ykuT	-	-	M	ko:K22044	-	ko00000,ko02000	Mechanosensitive ion channel
LNEOGEMI_00897	3.15e-131	ykuU	-	-	O	-	-	-	Alkyl hydroperoxide reductase
LNEOGEMI_00898	7.23e-107	ykuV	-	-	CO	-	-	-	thiol-disulfide
LNEOGEMI_00899	2.58e-147	ktrA	-	-	P	ko:K03499	-	ko00000,ko02000	COG0569 K transport systems, NAD-binding component
LNEOGEMI_00900	0.0	rnjA	-	-	S	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LNEOGEMI_00901	1.81e-41	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
LNEOGEMI_00902	1.44e-128	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
LNEOGEMI_00904	1.46e-131	ykyA	-	-	L	-	-	-	Putative cell-wall binding lipoprotein
LNEOGEMI_00905	7.59e-256	pdhA	1.2.4.1	-	C	ko:K00161	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
LNEOGEMI_00906	2.48e-227	pdhB	1.2.4.1	-	C	ko:K00162	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	br01601,ko00000,ko00001,ko00002,ko01000	COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
LNEOGEMI_00907	6.67e-248	pdhC	2.3.1.12	-	C	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
LNEOGEMI_00908	0.0	pdhD	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
LNEOGEMI_00909	2.41e-236	appD	-	-	P	ko:K02031,ko:K16202	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
LNEOGEMI_00910	2.61e-236	-	-	-	E	ko:K02032,ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
LNEOGEMI_00911	0.0	appA_2	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0747 ABC-type dipeptide transport system, periplasmic component
LNEOGEMI_00912	7.93e-222	-	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
LNEOGEMI_00913	1.7e-207	-	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
LNEOGEMI_00914	9.05e-85	-	-	-	CO	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	cell redox homeostasis
LNEOGEMI_00915	0.0	opuD	-	-	M	ko:K05020	-	ko00000,ko02000	Belongs to the BCCT transporter (TC 2.A.15) family
LNEOGEMI_00916	7.93e-167	pdaA_2	3.5.1.104	-	G	ko:K01567,ko:K22278	-	ko00000,ko01000	Polysaccharide deacetylase
LNEOGEMI_00917	3.27e-263	-	-	-	O	-	-	-	Peptidase family M48
LNEOGEMI_00918	0.0	speA	4.1.1.17, 4.1.1.19	-	E	ko:K01581,ko:K01585	ko00330,ko00480,ko01100,ko01110,ko01130,map00330,map00480,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Arginine
LNEOGEMI_00919	2.47e-52	yktA	-	-	S	-	-	-	Belongs to the UPF0223 family
LNEOGEMI_00920	6.15e-146	yktB	-	-	S	-	-	-	Belongs to the UPF0637 family
LNEOGEMI_00921	1.2e-194	suhB	3.1.3.25	-	G	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	ko00000,ko00001,ko00002,ko01000	Inositol monophosphatase
LNEOGEMI_00922	1.52e-208	-	1.1.1.31	-	I	ko:K00020	ko00280,ko01100,map00280,map01100	ko00000,ko00001,ko01000	COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
LNEOGEMI_00923	1.13e-17	-	-	-	S	-	-	-	Family of unknown function (DUF5325)
LNEOGEMI_00924	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
LNEOGEMI_00925	1.01e-66	ylaH	-	-	S	-	-	-	YlaH-like protein
LNEOGEMI_00926	1.3e-44	ylaI	-	-	S	-	-	-	protein conserved in bacteria
LNEOGEMI_00927	0.0	ylaK	-	-	T	ko:K07175	-	ko00000	ATPase related to phosphate starvation-inducible protein PhoH
LNEOGEMI_00928	3.07e-119	ylaL	-	-	S	-	-	-	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
LNEOGEMI_00929	1.92e-56	ylaN	-	-	S	-	-	-	Belongs to the UPF0358 family
LNEOGEMI_00930	0.0	pyc	6.4.1.1	-	C	ko:K01958	ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
LNEOGEMI_00931	3.05e-203	ctaA	-	-	O	ko:K02259	ko00190,ko00860,ko01100,ko01110,ko02020,ko04714,map00190,map00860,map01100,map01110,map02020,map04714	ko00000,ko00001,ko00002,ko03029	Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group
LNEOGEMI_00932	2.38e-253	ctaC	1.9.3.1	-	C	ko:K02275	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B)
LNEOGEMI_00933	0.0	ctaD	1.9.3.1	-	C	ko:K02274	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LNEOGEMI_00934	7.21e-143	ctaE	1.9.3.1	-	C	ko:K02276	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	COG1845 Heme copper-type cytochrome quinol oxidase, subunit 3
LNEOGEMI_00935	2.95e-68	ctaF	1.9.3.1	-	C	ko:K02277	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	COG3125 Heme copper-type cytochrome quinol oxidase, subunit 4
LNEOGEMI_00936	1.87e-119	yozB	-	-	S	ko:K08976	-	ko00000	membrane
LNEOGEMI_00937	6.53e-108	-	-	-	-	-	-	-	-
LNEOGEMI_00938	7.74e-83	ylbA	-	-	S	-	-	-	YugN-like family
LNEOGEMI_00939	1.31e-248	ylbC	-	-	S	-	-	-	protein with SCP PR1 domains
LNEOGEMI_00940	1.38e-108	-	-	-	Q	ko:K02614	ko00360,map00360	ko00000,ko00001,ko01000	protein, possibly involved in aromatic compounds catabolism
LNEOGEMI_00941	1.09e-91	ylbD	-	-	S	-	-	-	Putative coat protein
LNEOGEMI_00942	7.5e-43	ylbE	-	-	S	-	-	-	YlbE-like protein
LNEOGEMI_00943	2.29e-177	-	-	-	HJ	ko:K05844	-	ko00000,ko01000,ko03009	Prokaryotic glutathione synthetase, ATP-grasp domain
LNEOGEMI_00944	6.75e-91	ylbF	-	-	S	-	-	-	Belongs to the UPF0342 family
LNEOGEMI_00945	4.89e-63	ylbG	-	-	S	-	-	-	UPF0298 protein
LNEOGEMI_00946	4.19e-84	-	-	-	S	-	-	-	Methylthioribose kinase
LNEOGEMI_00947	2.67e-124	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	Methyltransferase
LNEOGEMI_00948	7.39e-108	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
LNEOGEMI_00949	1.04e-271	ylbJ	-	-	S	-	-	-	Sporulation integral membrane protein YlbJ
LNEOGEMI_00950	1.66e-177	ylbK	-	-	S	ko:K07001	-	ko00000	esterase of the alpha-beta hydrolase superfamily
LNEOGEMI_00951	2.96e-243	ylbL	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
LNEOGEMI_00952	3.06e-282	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
LNEOGEMI_00953	1.64e-119	ylbN	-	-	S	ko:K07040	-	ko00000	metal-binding, possibly nucleic acid-binding protein
LNEOGEMI_00954	7.12e-36	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
LNEOGEMI_00955	1.43e-98	ylbO	-	-	S	ko:K06314	-	ko00000,ko03000	SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
LNEOGEMI_00956	5.16e-120	ylbP	-	-	K	-	-	-	n-acetyltransferase
LNEOGEMI_00957	2.43e-187	panE	1.1.1.169	-	H	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LNEOGEMI_00959	0.0	bshC	-	-	S	ko:K22136	-	ko00000	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
LNEOGEMI_00960	4.81e-103	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
LNEOGEMI_00961	1.48e-218	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
LNEOGEMI_00962	2.26e-62	ftsL	-	-	D	-	-	-	cell division protein FtsL
LNEOGEMI_00963	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
LNEOGEMI_00965	0.0	spoVD	-	-	M	ko:K08384	ko00550,map00550	ko00000,ko00001,ko01011	stage V sporulation protein D
LNEOGEMI_00966	0.0	murE	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LNEOGEMI_00967	3.53e-310	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
LNEOGEMI_00968	2.84e-217	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LNEOGEMI_00969	4.79e-307	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
LNEOGEMI_00970	1.47e-246	spoVE	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
LNEOGEMI_00971	4.2e-165	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
LNEOGEMI_00973	4.62e-292	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
LNEOGEMI_00974	3.4e-240	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LNEOGEMI_00975	8.42e-205	spoIIGA	-	-	M	ko:K06383	-	ko00000,ko01000,ko01002	aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR
LNEOGEMI_00976	8.95e-161	sigE	-	-	K	ko:K03091	-	ko00000,ko03021	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LNEOGEMI_00977	1.05e-180	sigG	-	-	K	ko:K03091	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LNEOGEMI_00978	5.13e-61	ylmC	-	-	S	-	-	-	sporulation protein
LNEOGEMI_00979	2.85e-184	ylmD	-	-	S	ko:K05810	-	ko00000,ko01000	Belongs to the multicopper oxidase YfiH RL5 family
LNEOGEMI_00980	2.77e-151	ylmE	-	-	S	ko:K06997	-	ko00000	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
LNEOGEMI_00981	1.13e-91	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
LNEOGEMI_00982	7.03e-58	ylmG	-	-	S	ko:K02221	-	ko00000,ko02044	membrane
LNEOGEMI_00983	3.38e-173	ylmH	-	-	S	-	-	-	conserved protein, contains S4-like domain
LNEOGEMI_00984	1.53e-95	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	Cell division initiation protein
LNEOGEMI_00985	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LNEOGEMI_00986	1.4e-140	yteA	-	-	T	-	-	-	COG1734 DnaK suppressor protein
LNEOGEMI_00987	3.71e-95	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
LNEOGEMI_00988	2.76e-217	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
LNEOGEMI_00989	1.55e-115	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
LNEOGEMI_00990	5.35e-288	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Xanthine uracil
LNEOGEMI_00991	4.18e-207	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
LNEOGEMI_00992	6.03e-307	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
LNEOGEMI_00993	2.25e-264	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
LNEOGEMI_00994	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the CarB family
LNEOGEMI_00995	4.28e-179	pyrK	-	-	C	ko:K02823	ko00240,ko01100,map00240,map01100	ko00000,ko00001	Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
LNEOGEMI_00996	2.73e-211	pyrD	1.3.1.14	-	F	ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
LNEOGEMI_00997	2.36e-157	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
LNEOGEMI_00998	1.64e-138	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LNEOGEMI_00999	1.54e-145	-	-	-	Q	-	-	-	ubiE/COQ5 methyltransferase family
LNEOGEMI_01001	0.0	yfhO	-	-	S	-	-	-	Bacterial membrane protein YfhO
LNEOGEMI_01002	0.0	FbpA	-	-	K	-	-	-	RNA-binding protein homologous to eukaryotic snRNP
LNEOGEMI_01003	0.0	yloB	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	COG0474 Cation transport ATPase
LNEOGEMI_01004	1.15e-52	ylzA	-	-	S	ko:K09777	-	ko00000	Belongs to the UPF0296 family
LNEOGEMI_01005	9.15e-143	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
LNEOGEMI_01006	2.67e-39	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
LNEOGEMI_01007	3.81e-274	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LNEOGEMI_01008	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LNEOGEMI_01009	1.43e-224	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LNEOGEMI_01010	0.0	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LNEOGEMI_01011	5.6e-170	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
LNEOGEMI_01012	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
LNEOGEMI_01013	2.01e-210	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
LNEOGEMI_01014	2.6e-149	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
LNEOGEMI_01015	4.09e-35	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
LNEOGEMI_01016	1.81e-78	yloU	-	-	S	-	-	-	protein conserved in bacteria
LNEOGEMI_01017	0.0	yloV	-	-	S	ko:K07030	-	ko00000	kinase related to dihydroxyacetone kinase
LNEOGEMI_01018	2.67e-191	yitS	-	-	S	-	-	-	protein conserved in bacteria
LNEOGEMI_01019	1.51e-155	sdaAB	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase
LNEOGEMI_01020	1.55e-195	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase
LNEOGEMI_01021	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LNEOGEMI_01022	1.53e-127	fapR	-	-	K	-	-	-	Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism
LNEOGEMI_01023	2.9e-228	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
LNEOGEMI_01024	3.45e-214	fabD	2.3.1.39	-	I	ko:K00645	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	malonyl CoA-acyl carrier protein transacylase
LNEOGEMI_01025	1.16e-161	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	reductase
LNEOGEMI_01026	1.35e-42	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LNEOGEMI_01027	1.55e-177	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
LNEOGEMI_01028	1.67e-14	yfkK	-	-	S	-	-	-	Belongs to the UPF0435 family
LNEOGEMI_01029	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
LNEOGEMI_01030	3.38e-226	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
LNEOGEMI_01031	5.45e-68	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
LNEOGEMI_01032	2.4e-312	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LNEOGEMI_01033	1.87e-57	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
LNEOGEMI_01034	1.11e-45	ylqC	-	-	S	ko:K06960	-	ko00000	Belongs to the UPF0109 family
LNEOGEMI_01035	5.04e-90	-	-	-	S	-	-	-	YlqD protein
LNEOGEMI_01036	4.94e-119	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LNEOGEMI_01037	2.12e-167	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
LNEOGEMI_01038	0.0	-	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl tRNA synthetase N terminal dom
LNEOGEMI_01039	1.35e-73	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
LNEOGEMI_01040	2.49e-181	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	COG4464 Capsular polysaccharide biosynthesis protein
LNEOGEMI_01041	6.06e-156	epsB	2.7.10.2	-	D	ko:K00903	-	ko00000,ko01000,ko01001	COG0489 ATPases involved in chromosome partitioning
LNEOGEMI_01042	2.53e-149	ywqC	-	-	M	ko:K19420	-	ko00000	biosynthesis protein
LNEOGEMI_01043	8.22e-217	tagU	-	-	K	-	-	-	May catalyze the final step in cell wall teichoic acid biosynthesis, the transfer of the anionic cell wall polymers (APs) from their lipid-linked precursor to the cell wall peptidoglycan (PG)
LNEOGEMI_01044	2.45e-103	-	-	-	S	-	-	-	Tetratrico peptide repeat
LNEOGEMI_01045	9.4e-105	guaD	3.5.4.3	-	FJ	ko:K01487	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	COG0590 Cytosine adenosine deaminases
LNEOGEMI_01046	1.09e-97	-	-	-	G	-	-	-	Transmembrane secretion effector
LNEOGEMI_01047	1.25e-281	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
LNEOGEMI_01048	4.06e-244	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
LNEOGEMI_01049	5.45e-207	tagU	-	-	K	-	-	-	May catalyze the final step in cell wall teichoic acid biosynthesis, the transfer of the anionic cell wall polymers (APs) from their lipid-linked precursor to the cell wall peptidoglycan (PG)
LNEOGEMI_01050	5.58e-59	yjdJ	-	-	S	ko:K06975	-	ko00000	GCN5-related N-acetyl-transferase
LNEOGEMI_01051	7.3e-287	-	-	-	-	-	-	-	-
LNEOGEMI_01052	2.08e-305	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LNEOGEMI_01053	3.63e-289	lytE	-	-	M	-	-	-	NlpC/P60 family
LNEOGEMI_01055	6.06e-20	-	-	-	Q	-	-	-	N-acetyltransferase
LNEOGEMI_01056	2.17e-102	yisT	-	-	S	-	-	-	DinB family
LNEOGEMI_01057	2.48e-118	-	-	-	J	-	-	-	COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
LNEOGEMI_01058	0.0	pip	-	-	S	ko:K01421	-	ko00000	YhgE Pip N-terminal domain protein
LNEOGEMI_01059	1.55e-94	fabZ	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
LNEOGEMI_01060	5.4e-174	estA	-	CE1	S	ko:K03930	-	ko00000,ko01000	Putative esterase
LNEOGEMI_01061	4.67e-139	azoR	-	-	I	ko:K01118	-	ko00000,ko01000	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
LNEOGEMI_01062	1.45e-238	-	-	-	S	ko:K06308	-	ko00000	Spore germination B3/ GerAC like, C-terminal
LNEOGEMI_01063	1.81e-252	-	-	-	E	-	-	-	Spore germination protein
LNEOGEMI_01064	0.0	-	-	-	P	-	-	-	Spore gernimation protein GerA
LNEOGEMI_01065	1.05e-77	-	-	-	S	-	-	-	DNA-directed RNA polymerase subunit beta
LNEOGEMI_01066	2.99e-176	flhP	-	-	N	ko:K02392	ko02040,map02040	ko00000,ko00001,ko02035	flagellar basal body
LNEOGEMI_01067	6.51e-177	flhO	-	-	N	ko:K02392	ko02040,map02040	ko00000,ko00001,ko02035	flagellar basal body
LNEOGEMI_01068	1.9e-231	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Rod shape-determining protein
LNEOGEMI_01069	1.68e-60	spoIIID	-	-	K	ko:K06283	-	ko00000,ko03000	Stage III sporulation protein D
LNEOGEMI_01070	7.63e-59	ykkD	-	-	P	ko:K18925	-	ko00000,ko00002,ko02000	Multidrug resistance protein
LNEOGEMI_01071	7.24e-69	ykkC	-	-	P	ko:K18924	-	ko00000,ko00002,ko02000	Multidrug resistance protein
LNEOGEMI_01072	1.35e-168	spoIIQ	-	-	M	ko:K06386	-	ko00000	COG0739 Membrane proteins related to metalloendopeptidases
LNEOGEMI_01073	4.2e-241	spoIID	-	-	D	ko:K06381	-	ko00000	Stage II sporulation protein D
LNEOGEMI_01074	1.92e-301	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LNEOGEMI_01075	1.66e-21	ywmB	-	-	S	-	-	-	TATA-box binding
LNEOGEMI_01076	2.09e-81	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
LNEOGEMI_01077	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
LNEOGEMI_01078	3.39e-195	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LNEOGEMI_01079	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
LNEOGEMI_01080	2.89e-118	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LNEOGEMI_01081	2.37e-47	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
LNEOGEMI_01082	2.78e-28	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LNEOGEMI_01083	3.41e-170	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
LNEOGEMI_01084	1.25e-10	atpI	-	-	S	ko:K02116	-	ko00000,ko00194	ATP synthase I chain
LNEOGEMI_01085	4.29e-40	-	-	-	S	-	-	-	Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter
LNEOGEMI_01086	0.0	prtS	3.4.21.110, 3.4.21.96	-	O	ko:K01361,ko:K08652,ko:K14647	ko02024,map02024	ko00000,ko00001,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
LNEOGEMI_01087	1.76e-114	panZ	-	-	K	-	-	-	-acetyltransferase
LNEOGEMI_01088	5.5e-148	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LNEOGEMI_01089	2.42e-299	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
LNEOGEMI_01090	1.18e-117	ywlG	-	-	S	-	-	-	Belongs to the UPF0340 family
LNEOGEMI_01091	1.59e-104	rpiB	5.3.1.6	-	G	ko:K01808	ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribose 5-phosphate isomerase
LNEOGEMI_01092	3.15e-210	mcpA	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	Chemotaxis
LNEOGEMI_01093	3.25e-92	ywlE	3.1.3.48, 3.9.1.2	-	T	ko:K01104,ko:K20201	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LNEOGEMI_01094	1.61e-119	mntP	-	-	P	-	-	-	Probably functions as a manganese efflux pump
LNEOGEMI_01095	2.51e-191	csbX	-	-	EGP	-	-	-	Major facilitator superfamily
LNEOGEMI_01096	1.77e-124	-	5.3.1.14, 5.3.1.5	-	M	ko:K01805,ko:K01820	ko00040,ko00051,ko01100,ko01120,map00040,map00051,map01100,map01120	ko00000,ko00001,ko01000	Xylose isomerase-like TIM barrel
LNEOGEMI_01097	7.42e-55	-	-	-	K	-	-	-	SIS domain
LNEOGEMI_01098	1.88e-85	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LNEOGEMI_01099	3.2e-77	-	-	-	S	-	-	-	Regulator of ribonuclease activity B
LNEOGEMI_01100	1.3e-232	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
LNEOGEMI_01101	1.36e-96	ywlB	1.20.4.1, 2.3.1.1	-	E	ko:K00537,ko:K00619	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the acetyltransferase family. ArgA subfamily
LNEOGEMI_01102	7.81e-148	spoIIR	-	-	S	ko:K06387	-	ko00000	stage II sporulation protein R
LNEOGEMI_01103	4.19e-205	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
LNEOGEMI_01104	1.04e-230	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LNEOGEMI_01105	0.0	cdr	1.11.1.1	-	P	ko:K05910	-	ko00000,ko01000	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
LNEOGEMI_01106	4.85e-97	-	-	-	-	-	-	-	-
LNEOGEMI_01107	1.27e-140	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
LNEOGEMI_01108	2.08e-54	rpmE2	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
LNEOGEMI_01109	1.2e-299	rho	-	-	K	ko:K03628	ko03018,map03018	ko00000,ko00001,ko03019,ko03021	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
LNEOGEMI_01110	3.14e-228	glpX	3.1.3.11	-	G	ko:K02446	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	fructose-1,6-bisphosphatase
LNEOGEMI_01111	3.54e-279	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LNEOGEMI_01112	8.05e-149	tal	2.2.1.2	-	G	ko:K00616	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LNEOGEMI_01113	1.11e-204	fbaA	4.1.2.13	-	G	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Aldolase
LNEOGEMI_01114	3.65e-78	spo0F	-	-	T	ko:K02490	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	response regulator
LNEOGEMI_01115	6.4e-113	ywjG	-	-	S	-	-	-	Domain of unknown function (DUF2529)
LNEOGEMI_01116	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
LNEOGEMI_01117	3.1e-91	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
LNEOGEMI_01118	4.32e-140	kstR2_2	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_01119	2.72e-261	mmgC	-	-	I	ko:K18244	-	ko00000,ko01000	acyl-CoA dehydrogenase
LNEOGEMI_01120	6.82e-192	mmgB	1.1.1.157	-	I	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	ko00000,ko00001,ko01000	Dehydrogenase
LNEOGEMI_01121	1.36e-268	mmgA	2.3.1.9	-	I	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
LNEOGEMI_01122	0.0	ywjF	-	-	C	-	-	-	COG0247 Fe-S oxidoreductase
LNEOGEMI_01123	2.94e-281	clsB	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the phospholipase D family. Cardiolipin synthase subfamily
LNEOGEMI_01124	0.0	-	-	-	L	-	-	-	COG3666 Transposase and inactivated derivatives
LNEOGEMI_01125	3.67e-93	-	-	-	-	-	-	-	-
LNEOGEMI_01126	6.77e-100	-	-	-	-	-	-	-	-
LNEOGEMI_01127	7.17e-184	-	-	-	D	-	-	-	Phage tail tape measure protein, TP901 family
LNEOGEMI_01128	1.5e-169	-	-	-	S	-	-	-	Phage tail protein
LNEOGEMI_01129	0.0	-	-	-	L	-	-	-	Phage minor structural protein
LNEOGEMI_01131	1.35e-93	-	-	-	S	-	-	-	Bacteriophage holin family
LNEOGEMI_01132	3.98e-146	cwlC	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	n-acetylmuramoyl-L-alanine amidase
LNEOGEMI_01133	7.6e-137	yfhC	-	-	C	-	-	-	nitroreductase
LNEOGEMI_01134	0.0	pbpC	3.4.16.4	-	M	ko:K02545,ko:K21467	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko00002,ko01000,ko01011,ko01504	Penicillin-binding Protein
LNEOGEMI_01135	2.37e-10	-	-	-	-	-	-	-	-
LNEOGEMI_01137	6.63e-231	yvnB	-	-	Q	-	-	-	Calcineurin-like phosphoesterase
LNEOGEMI_01138	9.3e-126	-	-	-	CO	-	-	-	Thioredoxin
LNEOGEMI_01139	4.23e-218	yeaC	-	-	S	ko:K03924	-	ko00000,ko01000	COG0714 MoxR-like ATPases
LNEOGEMI_01140	4.7e-263	yeaD	-	-	S	-	-	-	conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
LNEOGEMI_01141	0.0	yebA	-	-	E	-	-	-	COG1305 Transglutaminase-like enzymes
LNEOGEMI_01142	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
LNEOGEMI_01143	1.53e-14	-	-	-	-	-	-	-	-
LNEOGEMI_01145	0.0	hsdR	3.1.21.3	-	L	ko:K01153	-	ko00000,ko01000,ko02048	COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases
LNEOGEMI_01146	1.91e-301	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	Type I restriction-modification system
LNEOGEMI_01147	6.11e-122	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
LNEOGEMI_01148	0.0	cotA	1.16.3.3	-	Q	ko:K06324	-	ko00000,ko01000	multicopper oxidases
LNEOGEMI_01149	0.0	-	-	-	M	-	-	-	Glycosyl transferase family group 2
LNEOGEMI_01150	1.35e-92	-	-	-	-	-	-	-	-
LNEOGEMI_01151	0.0	ilvD	4.2.1.9	-	E	ko:K01687,ko:K16786	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,ko02010,map00290,map00770,map01100,map01110,map01130,map01210,map01230,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Belongs to the IlvD Edd family
LNEOGEMI_01152	0.0	ilvB	2.2.1.6	-	E	ko:K01652,ko:K16787	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,ko02010,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Acetolactate synthase
LNEOGEMI_01153	3.55e-110	ilvN	2.2.1.6	-	E	ko:K01653,ko:K16785	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,ko02010,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Acetolactate synthase
LNEOGEMI_01154	2.5e-235	ilvC	1.1.1.86	-	EH	ko:K00053	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
LNEOGEMI_01155	0.0	leuA	2.3.3.13	-	E	ko:K01649	ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LNEOGEMI_01156	1.12e-245	leuB	1.1.1.85	-	CE	ko:K00052	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
LNEOGEMI_01157	0.0	leuC	4.2.1.33, 4.2.1.35	-	E	ko:K01703	ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
LNEOGEMI_01158	4.07e-144	leuD	4.2.1.33, 4.2.1.35	-	E	ko:K01704	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
LNEOGEMI_01159	4.97e-227	ysoA	-	-	O	-	-	-	COG0457 FOG TPR repeat
LNEOGEMI_01160	8.96e-292	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
LNEOGEMI_01161	2.85e-303	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LNEOGEMI_01162	0.0	lonB	3.4.21.53	-	LO	ko:K04076	-	ko00000,ko01000,ko01002	Belongs to the peptidase S16 family
LNEOGEMI_01163	0.0	lon	3.4.21.53	-	O	ko:K01338	ko04112,map04112	ko00000,ko00001,ko01000,ko01002	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
LNEOGEMI_01164	5.13e-138	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
LNEOGEMI_01165	3.42e-313	hemA	1.2.1.70	-	H	ko:K02492	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
LNEOGEMI_01166	5.2e-186	hemX	-	-	O	ko:K02497	-	ko00000	cytochrome C
LNEOGEMI_01167	8.46e-212	hemC	2.5.1.61	-	H	ko:K01749	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps
LNEOGEMI_01168	2.87e-169	hemD	4.2.1.75	-	H	ko:K01719	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Uroporphyrinogen-III synthase
LNEOGEMI_01169	3.02e-228	hemB	4.2.1.24	-	H	ko:K01698	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the ALAD family
LNEOGEMI_01170	3.38e-310	hemL	5.4.3.8	-	H	ko:K01845	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Glutamate-1-semialdehyde aminotransferase
LNEOGEMI_01171	6.23e-223	spoVID	-	-	M	ko:K06417	-	ko00000	stage VI sporulation protein D
LNEOGEMI_01172	1.9e-198	-	-	-	-	-	-	-	-
LNEOGEMI_01173	5.51e-239	ysxE	-	-	S	-	-	-	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LNEOGEMI_01174	3.08e-139	-	-	-	-	-	-	-	-
LNEOGEMI_01175	1.27e-37	-	-	-	-	-	-	-	-
LNEOGEMI_01176	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
LNEOGEMI_01177	1.18e-292	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
LNEOGEMI_01178	1.2e-150	comC	3.4.23.43	-	NOU	ko:K02236,ko:K02654	-	ko00000,ko00002,ko01000,ko01002,ko02035,ko02044	COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases
LNEOGEMI_01179	3.77e-248	-	-	-	-	ko:K06380	-	ko00000	-
LNEOGEMI_01180	0.0	yuxL	3.4.19.1	-	EU	ko:K01303	-	ko00000,ko01000,ko01002	peptidase
LNEOGEMI_01181	1.66e-131	maf	-	-	D	ko:K06287	-	ko00000	septum formation protein Maf
LNEOGEMI_01182	2.9e-156	radC	-	-	E	ko:K03630	-	ko00000	Belongs to the UPF0758 family
LNEOGEMI_01183	1.99e-238	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Rod shape-determining protein MreB
LNEOGEMI_01184	1.02e-203	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
LNEOGEMI_01185	1.48e-103	mreD	-	-	M	ko:K03571	-	ko00000,ko03036	shape-determining protein
LNEOGEMI_01186	3.82e-157	minC	-	-	D	ko:K03610	-	ko00000,ko03036,ko04812	Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
LNEOGEMI_01187	6.84e-183	minD	-	-	D	ko:K03609	-	ko00000,ko03036,ko04812	Belongs to the ParA family
LNEOGEMI_01188	3.58e-119	yfkM	3.5.1.124	-	S	ko:K05520	-	ko00000,ko01000,ko01002	protease
LNEOGEMI_01189	2.17e-97	-	4.6.1.17	-	H	ko:K03637	ko00790,ko01100,ko04122,map00790,map01100,map04122	ko00000,ko00001,ko01000	MoaC family
LNEOGEMI_01190	9.17e-118	-	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	BioY family
LNEOGEMI_01191	1.93e-214	yqkF	-	-	C	-	-	-	oxidoreductases (related to aryl-alcohol dehydrogenases)
LNEOGEMI_01192	6.87e-163	spoIVFA	-	-	M	ko:K06401	-	ko00000	COG0739 Membrane proteins related to metalloendopeptidases
LNEOGEMI_01193	3.38e-172	spoIVFB	-	-	S	ko:K06402	-	ko00000,ko01000,ko01002	Stage IV sporulation protein
LNEOGEMI_01194	0.0	cafA	-	-	J	ko:K08301	-	ko00000,ko01000,ko03009,ko03019	ribonuclease, Rne Rng family
LNEOGEMI_01195	5.22e-65	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
LNEOGEMI_01196	5.37e-74	ysxB	-	-	J	ko:K07584	-	ko00000	ribosomal protein
LNEOGEMI_01197	1.58e-59	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
LNEOGEMI_01198	2.47e-58	abrB	-	-	K	ko:K06284	-	ko00000,ko03000	SpoVT / AbrB like domain
LNEOGEMI_01199	1.88e-273	-	-	-	Q	-	-	-	COG1228 Imidazolonepropionase and related amidohydrolases
LNEOGEMI_01201	4.16e-150	ung2	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil DNA glycosylase superfamily
LNEOGEMI_01202	1.41e-264	-	1.4.5.1	-	E	ko:K00285	ko00360,map00360	ko00000,ko00001,ko01000	COG0665 Glycine D-amino acid oxidases (deaminating)
LNEOGEMI_01203	2.21e-166	-	-	-	S	ko:K07010	-	ko00000,ko01002	Peptidase C26
LNEOGEMI_01204	0.0	nylA	3.5.1.4	-	J	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	ko00000,ko00001,ko01000	Belongs to the amidase family
LNEOGEMI_01205	5.83e-100	-	-	-	S	-	-	-	DinB family
LNEOGEMI_01206	2.34e-211	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
LNEOGEMI_01207	4.11e-203	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
LNEOGEMI_01208	2.52e-205	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease
LNEOGEMI_01209	1.44e-187	pstBA	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LNEOGEMI_01210	1.5e-184	pstB	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LNEOGEMI_01211	1.67e-141	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
LNEOGEMI_01212	7.61e-81	-	-	-	-	-	-	-	-
LNEOGEMI_01213	0.0	addB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	exonuclease activity
LNEOGEMI_01214	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
LNEOGEMI_01215	0.0	cheA	2.7.13.3	-	NT	ko:K03407	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035	COG0643 Chemotaxis protein histidine kinase and related kinases
LNEOGEMI_01216	7.36e-89	cheW	-	-	NT	ko:K03408,ko:K03415	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko00002,ko02022,ko02035	chemotaxis
LNEOGEMI_01217	0.0	asnH	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
LNEOGEMI_01218	1.31e-63	-	-	-	S	-	-	-	IDEAL
LNEOGEMI_01219	3.16e-196	ykgA	-	-	E	-	-	-	Amidinotransferase
LNEOGEMI_01220	0.0	yqjD	2.1.3.15, 6.4.1.3	-	I	ko:K01966	ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
LNEOGEMI_01221	2.29e-115	-	-	-	-	-	-	-	-
LNEOGEMI_01222	5.57e-83	ytwF	-	-	P	-	-	-	Sulfurtransferase
LNEOGEMI_01223	9.73e-55	-	-	-	-	-	-	-	-
LNEOGEMI_01224	4.85e-186	yitV	-	-	S	ko:K06889	-	ko00000	COG1073 Hydrolases of the alpha beta superfamily
LNEOGEMI_01225	8.93e-187	yitT	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2179)
LNEOGEMI_01226	1.4e-16	-	-	-	S	-	-	-	Intracellular proteinase inhibitor
LNEOGEMI_01228	0.0	ywqA	-	-	L	-	-	-	COG0553 Superfamily II DNA RNA helicases, SNF2 family
LNEOGEMI_01229	4.35e-282	ywqB	-	-	S	-	-	-	zinc ion binding
LNEOGEMI_01230	4.2e-139	-	-	-	-	-	-	-	-
LNEOGEMI_01231	2.72e-102	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
LNEOGEMI_01232	1.24e-192	yitU	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolases of the HAD superfamily
LNEOGEMI_01233	5.56e-213	ctaG	-	-	S	ko:K02862	-	ko00000	cytochrome c oxidase
LNEOGEMI_01234	3.5e-248	argC	1.2.1.38	-	E	ko:K00145	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
LNEOGEMI_01235	1.41e-284	argJ	2.3.1.1, 2.3.1.35	-	E	ko:K00620	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
LNEOGEMI_01236	7.81e-165	argB	2.7.2.8	-	E	ko:K00930	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the acetylglutamate kinase family. ArgB subfamily
LNEOGEMI_01237	6.54e-271	argD	2.6.1.11, 2.6.1.17	-	E	ko:K00821	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	acetylornithine aminotransferase
LNEOGEMI_01238	2.17e-266	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
LNEOGEMI_01239	0.0	carB	6.3.5.5	-	EF	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase ammonia chain
LNEOGEMI_01240	3.48e-217	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LNEOGEMI_01241	5.51e-83	ytaB	-	-	T	ko:K05770	ko04080,ko04214,ko04979,ko05166,map04080,map04214,map04979,map05166	ko00000,ko00001,ko02000	membrane
LNEOGEMI_01242	9.08e-201	ccpC	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_01243	7.21e-261	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
LNEOGEMI_01244	5.99e-266	mmgD	2.3.3.1	-	C	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Belongs to the citrate synthase family
LNEOGEMI_01245	0.0	prpD	4.2.1.79	-	S	ko:K01720	ko00640,map00640	ko00000,ko00001,ko01000	2-methylcitrate dehydratase
LNEOGEMI_01246	4.33e-205	prpB	4.1.3.30, 5.4.2.9	-	G	ko:K01841,ko:K03417	ko00440,ko00640,ko01100,ko01120,ko01130,map00440,map00640,map01100,map01120,map01130	ko00000,ko00001,ko01000	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
LNEOGEMI_01247	7.41e-201	hgd	1.1.1.31, 1.1.1.60	-	I	ko:K00020,ko:K00042	ko00280,ko00630,ko01100,map00280,map00630,map01100	ko00000,ko00001,ko01000	3-hydroxyisobutyrate dehydrogenase
LNEOGEMI_01248	0.0	iolA	1.2.1.18, 1.2.1.27	-	C	ko:K00140	ko00280,ko00410,ko00562,ko00640,ko01100,ko01200,map00280,map00410,map00562,map00640,map01100,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
LNEOGEMI_01249	1.61e-246	-	-	-	I	-	-	-	3-hydroxyisobutyryl-CoA hydrolase
LNEOGEMI_01250	1.18e-140	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin synthase
LNEOGEMI_01251	6.23e-287	ribBA	3.5.4.25, 4.1.99.12	-	H	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
LNEOGEMI_01252	4.15e-106	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
LNEOGEMI_01253	3.72e-106	ypuF	-	-	S	ko:K09763	-	ko00000	Domain of unknown function (DUF309)
LNEOGEMI_01254	9.2e-161	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
LNEOGEMI_01255	1.78e-127	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
LNEOGEMI_01256	1.67e-135	-	-	-	K	-	-	-	Uncharacterized protein conserved in bacteria (DUF2087)
LNEOGEMI_01257	0.0	acoD	-	-	C	ko:K00138	ko00010,ko00620,ko01100,ko01110,ko01120,map00010,map00620,map01100,map01110,map01120	ko00000,ko00001,ko01000	Belongs to the aldehyde dehydrogenase family
LNEOGEMI_01258	2.19e-216	sodF	1.15.1.1	-	P	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	ko00000,ko00001,ko01000	Superoxide dismutase
LNEOGEMI_01259	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LNEOGEMI_01260	0.0	ubiB	-	-	S	ko:K03688	-	ko00000	ABC1 family
LNEOGEMI_01261	1.89e-59	-	-	-	S	-	-	-	ATP synthase, subunit b
LNEOGEMI_01262	1.44e-157	-	-	-	S	-	-	-	membrane
LNEOGEMI_01263	5.4e-59	-	-	-	S	-	-	-	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
LNEOGEMI_01264	2.13e-101	spoVAC	-	-	S	ko:K06405	-	ko00000	stage V sporulation protein AC
LNEOGEMI_01265	6.02e-246	spoVAD	-	-	I	ko:K06406	-	ko00000	Stage V sporulation protein AD
LNEOGEMI_01266	1.46e-73	spoVAE	-	-	S	ko:K06407	-	ko00000	stage V sporulation protein
LNEOGEMI_01267	5.57e-268	dacB	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
LNEOGEMI_01268	7.2e-130	spmA	-	-	S	ko:K06373	-	ko00000	Spore maturation protein
LNEOGEMI_01269	5.76e-102	spmB	-	-	S	ko:K06374	-	ko00000	Spore maturation protein
LNEOGEMI_01270	3.81e-169	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
LNEOGEMI_01271	5.91e-125	resA	-	-	CO	-	-	-	Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c
LNEOGEMI_01272	0.0	resB	-	-	O	ko:K07399	-	ko00000	COG1333 ResB protein required for cytochrome c biosynthesis
LNEOGEMI_01273	1.13e-272	resC	-	-	O	-	-	-	'COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component'
LNEOGEMI_01274	2.69e-167	resD	-	-	T	ko:K07775	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LNEOGEMI_01275	0.0	resE	2.7.13.3	-	T	ko:K07651	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
LNEOGEMI_01276	2.15e-239	btuC	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LNEOGEMI_01277	7.94e-175	yvrA	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components
LNEOGEMI_01278	5.18e-122	yvqK	2.5.1.17	-	S	ko:K00798	ko00860,ko01100,map00860,map01100	ko00000,ko00001,ko00002,ko01000	Adenosyltransferase
LNEOGEMI_01280	5e-175	ykoY	-	-	P	-	-	-	COG0861 Membrane protein TerC, possibly involved in tellurium resistance
LNEOGEMI_01281	3.05e-314	nox	1.11.1.1	-	P	ko:K05910	-	ko00000,ko01000	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
LNEOGEMI_01282	0.0	serA	1.1.1.399, 1.1.1.95	-	E	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LNEOGEMI_01283	2.28e-57	fer	-	-	C	ko:K05337	-	ko00000	Ferredoxin
LNEOGEMI_01284	3.55e-223	ypbB	5.1.3.1	-	S	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	protein conserved in bacteria
LNEOGEMI_01285	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	DNA helicase
LNEOGEMI_01286	1.12e-129	ypbD	-	-	S	ko:K07052	-	ko00000	metal-dependent membrane protease
LNEOGEMI_01289	7.55e-69	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
LNEOGEMI_01290	1.44e-48	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
LNEOGEMI_01291	7.6e-288	-	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyl Transferase
LNEOGEMI_01292	5.84e-252	-	-	GT4	M	ko:K13678	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
LNEOGEMI_01293	8.81e-226	mprF	-	-	I	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
LNEOGEMI_01295	2.33e-281	-	-	-	E	ko:K01436	-	ko00000,ko01000,ko01002	COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
LNEOGEMI_01296	3.81e-183	ypbG	-	-	S	ko:K07098	-	ko00000	Calcineurin-like phosphoesterase superfamily domain
LNEOGEMI_01297	8.85e-212	ycgE	-	-	K	ko:K22491	-	ko00000,ko03000	MerR family transcriptional regulator
LNEOGEMI_01298	9.54e-140	mecB	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC
LNEOGEMI_01299	2.22e-161	-	-	-	T	-	-	-	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LNEOGEMI_01300	0.0	-	-	-	T	-	-	-	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
LNEOGEMI_01301	2.66e-226	-	-	-	-	-	-	-	-
LNEOGEMI_01302	3.06e-303	gudB	1.4.1.2, 1.4.1.4	-	E	ko:K00260,ko:K00262	ko00220,ko00250,ko00430,ko00910,ko01100,map00220,map00250,map00430,map00910,map01100	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
LNEOGEMI_01303	5.03e-230	ypdA	1.8.1.9	-	O	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	COG0492 Thioredoxin reductase
LNEOGEMI_01304	1.13e-225	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D
LNEOGEMI_01305	3.4e-145	prsW	-	-	S	-	-	-	Involved in the degradation of specific anti-sigma factors
LNEOGEMI_01306	4.79e-35	-	-	-	-	-	-	-	-
LNEOGEMI_01307	1.52e-261	metB	2.5.1.48	-	E	ko:K01739	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
LNEOGEMI_01308	0.0	yitJ	1.5.1.20, 2.1.1.10	-	E	ko:K00297,ko:K00547	ko00270,ko00670,ko00720,ko01100,ko01110,ko01120,ko01200,ko01523,map00270,map00670,map00720,map01100,map01110,map01120,map01200,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine
LNEOGEMI_01309	0.0	metH	2.1.1.13	-	E	ko:K00548	ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Methionine synthase
LNEOGEMI_01310	6.22e-209	sleB	3.5.1.28	-	M	ko:K01449	-	ko00000,ko01000	Spore cortex-lytic enzyme
LNEOGEMI_01311	1.76e-314	ypeB	-	-	H	ko:K06313	-	ko00000	sporulation protein
LNEOGEMI_01312	4.01e-168	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
LNEOGEMI_01313	3.6e-133	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	1-acyl-sn-glycerol-3-phosphate acyltransferase
LNEOGEMI_01314	1.68e-257	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
LNEOGEMI_01316	1.29e-314	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
LNEOGEMI_01317	2.91e-132	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
LNEOGEMI_01318	3.58e-237	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
LNEOGEMI_01319	2.5e-52	-	-	-	S	-	-	-	Stage VI sporulation protein F
LNEOGEMI_01320	8.81e-10	yphE	-	-	S	-	-	-	Protein of unknown function (DUF2768)
LNEOGEMI_01321	5.33e-171	yphF	-	-	-	-	-	-	-
LNEOGEMI_01322	0.0	spoIVA	-	-	S	ko:K06398	-	ko00000	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
LNEOGEMI_01323	6.78e-130	folE	3.5.4.16	-	H	ko:K01495	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	GTP cyclohydrolase
LNEOGEMI_01324	1.85e-48	mtrB	-	-	K	ko:K06285	-	ko00000,ko03000	Required for transcription attenuation control in the Trp operon. This trans-acting factor seems to recognize a 10 bases nucleotide sequence in the Trp leader transcript causing transcription termination. Binds the leader RNA only in presence of L-tryptophan
LNEOGEMI_01325	4.74e-73	hepS	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	heptaprenyl diphosphate synthase
LNEOGEMI_01326	1.23e-166	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
LNEOGEMI_01327	8.07e-202	ubiA	2.5.1.39	-	H	ko:K03179	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	UbiA prenyltransferase family
LNEOGEMI_01328	2.24e-203	mqnA	4.2.1.151	-	S	ko:K11782	ko00130,ko01110,map00130,map01110	ko00000,ko00001,ko01000	Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
LNEOGEMI_01329	6.62e-231	hepT	2.5.1.30, 2.5.1.83	-	H	ko:K00805,ko:K21275	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
LNEOGEMI_01330	6.26e-101	ndk	2.7.4.6	-	F	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	ko00000,ko00001,ko00002,ko01000,ko04131	Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
LNEOGEMI_01331	4.6e-179	cheR	2.1.1.80	-	NT	ko:K00575	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko01000,ko02035	COG1352 Methylase of chemotaxis methyl-accepting proteins
LNEOGEMI_01332	1.2e-279	aroC	4.2.3.5	-	E	ko:K01736	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
LNEOGEMI_01333	1.21e-246	aroB	4.2.3.4	-	E	ko:K01735	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
LNEOGEMI_01334	2.28e-77	aroH	5.4.99.5	-	E	ko:K06208	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis
LNEOGEMI_01335	0.0	trpE	4.1.3.27	-	EH	ko:K01657	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	ko00000,ko00001,ko00002,ko01000	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LNEOGEMI_01336	1.19e-233	trpD	2.4.2.18, 4.1.3.27	-	E	ko:K00766,ko:K13497	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LNEOGEMI_01337	2.44e-167	trpC	4.1.1.48, 5.3.1.24	-	E	ko:K01609,ko:K13498	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TrpC family
LNEOGEMI_01338	1.24e-148	trpF	5.3.1.24	-	E	ko:K01817	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	phosphoribosylanthranilate isomerase activity
LNEOGEMI_01339	5.74e-284	trpB	4.2.1.20, 5.3.1.24	-	E	ko:K01696,ko:K01817	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
LNEOGEMI_01340	1.33e-187	trpA	4.2.1.20	-	E	ko:K01695	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
LNEOGEMI_01341	2.83e-262	hisC	2.6.1.9	-	E	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LNEOGEMI_01342	6.1e-255	tyrA	1.3.1.12	-	E	ko:K04517	ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	prephenate dehydrogenase
LNEOGEMI_01343	4.72e-301	aroA	2.5.1.19	-	E	ko:K00800	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
LNEOGEMI_01344	3.77e-292	ypiA	-	-	S	-	-	-	COG0457 FOG TPR repeat
LNEOGEMI_01345	4.64e-124	ypiB	-	-	S	-	-	-	Belongs to the UPF0302 family
LNEOGEMI_01346	4.49e-107	ypiF	-	-	S	-	-	-	Protein of unknown function (DUF2487)
LNEOGEMI_01347	3.64e-119	qcrA	-	-	C	ko:K03886	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	Menaquinol-cytochrome c reductase
LNEOGEMI_01348	8.39e-159	qcrB	-	-	C	ko:K03887	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002	COG1290 Cytochrome b subunit of the bc complex
LNEOGEMI_01349	4.35e-192	qcrC	-	-	C	ko:K03888	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002	Menaquinol-cytochrome c reductase cytochrome b c subunit
LNEOGEMI_01350	4.73e-140	ypjA	-	-	S	-	-	-	membrane
LNEOGEMI_01351	4.46e-180	-	-	-	S	-	-	-	Sporulation protein YpjB (SpoYpjB)
LNEOGEMI_01352	1.21e-151	yugP	-	-	S	ko:K06973	-	ko00000	Zn-dependent protease
LNEOGEMI_01353	4.22e-269	tcaB	-	-	EGP	ko:K07552	-	ko00000,ko02000	-transporter
LNEOGEMI_01354	9.08e-201	ypjC	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2179)
LNEOGEMI_01355	1.62e-256	-	-	-	L	ko:K07496	-	ko00000	Transposase
LNEOGEMI_01356	7.73e-79	ypjD	-	-	S	-	-	-	Nucleotide pyrophosphohydrolase
LNEOGEMI_01357	3.39e-183	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
LNEOGEMI_01358	1.38e-97	mgsA	4.2.3.3	-	G	ko:K01734	ko00640,ko01120,map00640,map01120	ko00000,ko00001,ko01000	methylglyoxal synthase
LNEOGEMI_01359	9.9e-105	-	-	-	M	-	-	-	Acetyltransferase (GNAT) domain
LNEOGEMI_01360	6.88e-297	hint	6.5.1.3	-	S	ko:K14415	-	ko00000,ko01000,ko03016	tRNA-splicing ligase RtcB
LNEOGEMI_01361	3.33e-51	-	-	-	-	-	-	-	-
LNEOGEMI_01362	4.81e-94	yyaT	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
LNEOGEMI_01363	6.31e-172	-	-	-	Q	-	-	-	Methyltransferase domain
LNEOGEMI_01364	3.03e-68	-	-	-	-	-	-	-	-
LNEOGEMI_01365	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LNEOGEMI_01366	8.36e-115	-	-	-	S	-	-	-	Protein of unknown function (DUF1706)
LNEOGEMI_01367	0.0	gnd	1.1.1.343, 1.1.1.44	-	G	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LNEOGEMI_01368	2.79e-165	yodH	-	-	Q	-	-	-	Methyltransferase
LNEOGEMI_01369	4.53e-206	-	-	-	M	-	-	-	3D domain
LNEOGEMI_01370	6.41e-210	-	-	-	M	-	-	-	3D domain
LNEOGEMI_01371	2.6e-201	yeaB	-	-	P	-	-	-	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LNEOGEMI_01372	2.52e-224	-	-	-	L	ko:K07496	-	ko00000	Transposase
LNEOGEMI_01373	1.64e-261	ilvE	2.6.1.42	-	E	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Branched-chain amino acid aminotransferase
LNEOGEMI_01374	1.62e-187	ysaA	3.1.3.5, 3.8.1.2	-	S	ko:K01560,ko:K07025,ko:K08723	ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120	ko00000,ko00001,ko01000	HAD-hyrolase-like
LNEOGEMI_01375	8.73e-132	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
LNEOGEMI_01376	0.0	ykoD	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
LNEOGEMI_01377	1.74e-181	ykoC	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
LNEOGEMI_01378	1.16e-140	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
LNEOGEMI_01379	3.51e-137	yvdD	3.2.2.10	-	S	ko:K06966	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the LOG family
LNEOGEMI_01380	1.61e-145	-	-	CBM50	M	ko:K19224	-	ko00000,ko01000,ko01002,ko01011	COG1388 FOG LysM repeat
LNEOGEMI_01381	4.41e-289	-	-	-	S	-	-	-	Acetyltransferase
LNEOGEMI_01382	2.74e-132	yvdT	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_01383	2.51e-235	yvbT	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LNEOGEMI_01384	1.89e-173	spoIISA	-	-	S	ko:K06388	-	ko00000	Toxin SpoIISA, type II toxin-antitoxin system
LNEOGEMI_01385	5.07e-236	ywcH1	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LNEOGEMI_01386	1.21e-214	mccA	2.5.1.134, 2.5.1.47	-	E	ko:K01738,ko:K17216	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Cysteine synthase
LNEOGEMI_01387	6.23e-266	mccB	4.4.1.1, 4.4.1.2, 4.4.1.8	-	E	ko:K01760,ko:K17217	ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
LNEOGEMI_01388	7.29e-77	yetG	1.14.99.48	-	S	ko:K07145	ko00860,ko01110,map00860,map01110	ko00000,ko00001,ko01000	Antibiotic biosynthesis monooxygenase
LNEOGEMI_01389	0.0	asbA	-	-	Q	-	-	-	Siderophore biosynthesis protein
LNEOGEMI_01390	0.0	asbB	-	-	Q	-	-	-	IucA / IucC family
LNEOGEMI_01391	2.93e-279	asbC	-	-	IQ	ko:K00666	-	ko00000,ko01000,ko01004	AMP-binding enzyme C-terminal domain
LNEOGEMI_01392	9.05e-55	asbD	-	-	IQ	-	-	-	Phosphopantetheine attachment site
LNEOGEMI_01393	3.63e-231	asbE	-	-	IQ	-	-	-	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LNEOGEMI_01394	7.17e-199	asbF	4.2.1.118	-	G	ko:K15652	ko00400,ko01110,ko01130,map00400,map01110,map01130	ko00000,ko00001,ko01000	Xylose isomerase-like TIM barrel
LNEOGEMI_01395	2.43e-125	-	3.1.3.82, 3.1.3.83	-	E	ko:K03273	ko00540,ko01100,map00540,map01100	ko00000,ko00001,ko00002,ko01000,ko01005	D,D-heptose 1,7-bisphosphate phosphatase
LNEOGEMI_01396	2.12e-309	dsdA	4.3.1.18	-	E	ko:K01753	ko00260,map00260	ko00000,ko00001,ko01000	Belongs to the serine threonine dehydratase family. DsdA subfamily
LNEOGEMI_01397	4.45e-187	exoA	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
LNEOGEMI_01398	1.67e-161	yeeN	-	-	K	-	-	-	transcriptional regulatory protein
LNEOGEMI_01399	5.72e-188	ywfM	-	-	EG	ko:K03298	-	ko00000,ko02000	EamA-like transporter family
LNEOGEMI_01401	2.78e-71	yitW	-	-	S	-	-	-	metal-sulfur cluster biosynthetic enzyme
LNEOGEMI_01402	1.28e-06	-	-	-	S	-	-	-	Putative methionine and alanine importer, small subunit
LNEOGEMI_01403	0.0	-	-	-	S	ko:K03308	-	ko00000	Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
LNEOGEMI_01404	1.65e-134	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
LNEOGEMI_01405	1.39e-88	-	-	-	-	-	-	-	-
LNEOGEMI_01406	1.78e-56	-	-	-	-	-	-	-	-
LNEOGEMI_01407	4.24e-270	blt	-	-	EGP	ko:K08153,ko:K19578	-	ko00000,ko00002,ko02000	COG0477 Permeases of the major facilitator superfamily
LNEOGEMI_01408	1.58e-55	-	-	-	-	-	-	-	-
LNEOGEMI_01409	7.85e-159	-	-	-	-	-	-	-	-
LNEOGEMI_01410	1.14e-94	-	-	-	S	-	-	-	Activator of Hsp90 ATPase homolog 1-like protein
LNEOGEMI_01411	1.78e-195	-	-	-	K	ko:K13653	-	ko00000,ko03000	AraC family transcriptional regulator
LNEOGEMI_01412	2.95e-117	-	-	-	K	-	-	-	Virulence activator alpha C-term
LNEOGEMI_01413	1.77e-102	-	-	-	S	-	-	-	Domain of unknown function (DUF4188)
LNEOGEMI_01414	6.76e-16	yxlE	-	-	S	-	-	-	Phospholipase_D-nuclease N-terminal
LNEOGEMI_01415	2.68e-200	yxlF	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
LNEOGEMI_01416	2.03e-177	yxlG	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
LNEOGEMI_01417	2.4e-119	sigY	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
LNEOGEMI_01419	7.29e-18	-	-	-	-	-	-	-	-
LNEOGEMI_01420	3.35e-128	-	-	-	K	-	-	-	AraC family transcriptional regulator
LNEOGEMI_01421	2.64e-75	-	-	-	E	-	-	-	LysE type translocator
LNEOGEMI_01422	1.89e-105	yfiT	-	-	S	-	-	-	Belongs to the metal hydrolase YfiT family
LNEOGEMI_01423	1.38e-05	-	-	-	F	-	-	-	NUDIX domain
LNEOGEMI_01424	4.19e-190	-	3.4.11.5	-	I	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Alpha beta hydrolase
LNEOGEMI_01425	3.28e-89	-	-	-	S	-	-	-	Bacterial PH domain
LNEOGEMI_01426	9.65e-59	-	-	-	S	-	-	-	Belongs to the LOG family
LNEOGEMI_01427	2.07e-113	-	-	-	C	-	-	-	HEAT repeats
LNEOGEMI_01428	6.47e-132	ydeI	-	-	S	-	-	-	Bacteriocin-protection, YdeI or OmpD-Associated
LNEOGEMI_01429	1.43e-48	-	-	-	K	-	-	-	COG0202 DNA-directed RNA polymerase, alpha subunit 40 kD subunit
LNEOGEMI_01430	1.98e-139	-	-	-	S	-	-	-	Golgi phosphoprotein 3 (GPP34)
LNEOGEMI_01431	1.61e-191	yqfU	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2179)
LNEOGEMI_01432	2.45e-178	motA	-	-	N	ko:K02556	ko02020,ko02030,ko02040,map02020,map02030,map02040	ko00000,ko00001,ko02000,ko02035	flagellar motor
LNEOGEMI_01433	7.36e-172	motB	-	-	N	ko:K02557	ko02030,ko02040,map02030,map02040	ko00000,ko00001,ko02000,ko02035	Flagellar motor protein
LNEOGEMI_01434	2.57e-255	ytvI	-	-	S	-	-	-	sporulation integral membrane protein YtvI
LNEOGEMI_01435	1.55e-105	yocK	-	-	T	-	-	-	general stress protein
LNEOGEMI_01436	2.15e-75	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2200)
LNEOGEMI_01437	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
LNEOGEMI_01438	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
LNEOGEMI_01439	1.47e-91	yneT	-	-	S	ko:K06929	-	ko00000	CoA-binding protein
LNEOGEMI_01440	0.0	proWX	-	-	EM	ko:K05845,ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1174 ABC-type proline glycine betaine transport systems, permease component
LNEOGEMI_01441	7.76e-236	opuBA	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1125 ABC-type proline glycine betaine transport systems, ATPase components
LNEOGEMI_01442	1.76e-189	fadH	1.3.1.34	-	IQ	ko:K00219	-	ko00000,ko01000	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
LNEOGEMI_01443	3.3e-315	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Glycosyl hydrolase family 1
LNEOGEMI_01444	4.51e-69	-	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIA subunit
LNEOGEMI_01445	6.71e-257	-	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LNEOGEMI_01446	7.94e-61	licB2	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
LNEOGEMI_01447	2.21e-93	-	-	-	S	ko:K07149	-	ko00000	Membrane
LNEOGEMI_01448	0.0	-	-	-	GKT	ko:K03491	-	ko00000,ko03000	Mga helix-turn-helix domain
LNEOGEMI_01449	1.32e-173	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
LNEOGEMI_01450	1.5e-121	-	-	-	U	-	-	-	MarC family integral membrane protein
LNEOGEMI_01451	0.0	ypwA	3.4.17.19	-	E	ko:K01299	-	ko00000,ko01000,ko01002	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
LNEOGEMI_01452	1.96e-69	-	-	-	S	-	-	-	Belongs to the HesB IscA family
LNEOGEMI_01453	5.89e-109	-	-	-	Q	-	-	-	ubiE/COQ5 methyltransferase family
LNEOGEMI_01454	6.45e-235	-	-	-	G	-	-	-	Transmembrane secretion effector
LNEOGEMI_01456	2.04e-27	-	-	-	S	-	-	-	Protein of unknown function (DUF2564)
LNEOGEMI_01457	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
LNEOGEMI_01458	3.09e-66	-	-	-	-	-	-	-	-
LNEOGEMI_01459	6.31e-79	-	-	-	S	-	-	-	Src homology 3 domains
LNEOGEMI_01460	0.0	-	-	-	P	-	-	-	Spore gernimation protein GerA
LNEOGEMI_01461	1.68e-255	-	-	-	E	-	-	-	Spore germination protein
LNEOGEMI_01462	4.15e-258	-	-	-	S	ko:K06308	-	ko00000	Spore germination B3/ GerAC like, C-terminal
LNEOGEMI_01464	1.35e-211	-	-	-	NT	-	-	-	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
LNEOGEMI_01465	8.13e-82	-	-	-	-	-	-	-	-
LNEOGEMI_01466	2.86e-81	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
LNEOGEMI_01467	0.0	-	2.2.1.6	-	EH	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Thiamine pyrophosphate enzyme, central domain
LNEOGEMI_01468	1.32e-223	-	-	-	S	-	-	-	Oxidoreductase
LNEOGEMI_01469	1.29e-279	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
LNEOGEMI_01470	5.5e-51	-	-	-	-	-	-	-	-
LNEOGEMI_01471	5.79e-88	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids
LNEOGEMI_01472	1.53e-63	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
LNEOGEMI_01473	2.87e-126	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
LNEOGEMI_01474	3.2e-07	cotD	-	-	S	ko:K06327	-	ko00000	Inner spore coat protein D
LNEOGEMI_01475	3.28e-277	yprB	-	-	L	ko:K07502	-	ko00000	RNase_H superfamily
LNEOGEMI_01476	0.0	yprA	-	-	L	ko:K06877	-	ko00000	COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster
LNEOGEMI_01477	0.0	pepF	-	-	E	-	-	-	oligoendopeptidase F
LNEOGEMI_01478	0.0	gerAA	-	-	EG	ko:K06288,ko:K06310	-	ko00000	Spore germination protein
LNEOGEMI_01479	2.3e-237	gerAB	-	-	E	ko:K06289,ko:K06292	-	ko00000,ko02000	Spore germination protein
LNEOGEMI_01480	5.46e-259	gerAC	-	-	S	ko:K06290,ko:K06293,ko:K06312	-	ko00000	Spore germination B3/ GerAC like, C-terminal
LNEOGEMI_01481	2.07e-116	-	-	-	-	-	-	-	-
LNEOGEMI_01482	5.9e-137	yahD	-	-	S	ko:K06999	-	ko00000	Carboxylesterase
LNEOGEMI_01483	5.03e-229	ykcA	-	-	E	ko:K15975	-	ko00000	COG0346 Lactoylglutathione lyase and related lyases
LNEOGEMI_01484	1.31e-24	-	-	-	-	-	-	-	-
LNEOGEMI_01485	7.58e-188	ycsE	-	-	S	-	-	-	hydrolases of the HAD superfamily
LNEOGEMI_01486	1.1e-108	-	-	-	-	-	-	-	-
LNEOGEMI_01488	2.9e-05	-	-	-	S	ko:K06376	-	ko00000	Spo0E like sporulation regulatory protein
LNEOGEMI_01489	1.43e-198	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LNEOGEMI_01490	1.54e-80	kapB	-	-	G	ko:K06347	ko02020,map02020	ko00000,ko00001	Kinase associated protein B
LNEOGEMI_01492	8.96e-51	-	-	-	-	-	-	-	-
LNEOGEMI_01493	1.16e-146	ypjP	-	-	S	-	-	-	YpjP-like protein
LNEOGEMI_01494	0.0	gltD	1.4.1.13, 1.4.1.14	-	E	ko:K00266	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases
LNEOGEMI_01495	0.0	gltA	1.4.1.13, 1.4.1.14, 1.4.7.1	-	E	ko:K00265,ko:K00284	ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko01000	glutamate synthase
LNEOGEMI_01497	1.12e-196	telA	-	-	P	-	-	-	Belongs to the TelA family
LNEOGEMI_01498	1.34e-209	-	-	-	-	-	-	-	-
LNEOGEMI_01499	2.09e-244	-	-	-	S	-	-	-	Protein of unknown function (DUF2777)
LNEOGEMI_01500	4.19e-304	ydbT	-	-	S	ko:K08981	-	ko00000	Membrane
LNEOGEMI_01501	5.84e-110	ydbS	-	-	S	ko:K09167	-	ko00000	Bacterial PH domain
LNEOGEMI_01502	2.16e-39	-	-	-	-	-	-	-	-
LNEOGEMI_01503	2.63e-195	ypgR	-	-	C	-	-	-	COG0694 Thioredoxin-like proteins and domains
LNEOGEMI_01504	4.86e-176	-	-	-	T	-	-	-	Calcineurin-like phosphoesterase superfamily domain
LNEOGEMI_01505	6.98e-95	-	-	-	CO	-	-	-	Thioredoxin-like
LNEOGEMI_01506	3.12e-100	yphP	-	-	S	-	-	-	Belongs to the UPF0403 family
LNEOGEMI_01507	3.7e-70	yusE	-	-	CO	-	-	-	cell redox homeostasis
LNEOGEMI_01508	1.16e-214	rnz	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
LNEOGEMI_01509	5.49e-124	yraA	3.5.1.124	-	S	ko:K05520	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
LNEOGEMI_01510	7.48e-299	ilvA	4.3.1.19	-	E	ko:K01754	ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
LNEOGEMI_01511	2.9e-26	-	-	-	-	-	-	-	-
LNEOGEMI_01512	9.46e-67	yppE	-	-	S	-	-	-	Bacterial domain of unknown function (DUF1798)
LNEOGEMI_01513	1.29e-111	racA	-	-	K	ko:K11686	-	ko00000,ko03036	Required for the formation of axial filaments and for anchoring the origin regions at the cell poles in sporulating cells, thus ensuring proper chromosome segregation in the prespore. Binds in a dispersed manner throughout the chromosome but preferentially to sites clustered in the origin portion of the chromosome, causing condensation of the chromosome and its remodeling into an elongated, anchored structure
LNEOGEMI_01515	2.05e-202	yppC	-	-	S	-	-	-	Protein of unknown function (DUF2515)
LNEOGEMI_01516	1.41e-149	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
LNEOGEMI_01517	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
LNEOGEMI_01518	1.05e-162	-	-	-	K	-	-	-	AraC-type transcriptional regulator N-terminus
LNEOGEMI_01519	2.14e-65	-	-	-	S	-	-	-	Agrobacterium tumefaciens protein Atu4866
LNEOGEMI_01520	1.59e-144	-	-	-	S	-	-	-	Enoyl-(Acyl carrier protein) reductase
LNEOGEMI_01522	3.41e-128	-	1.6.5.2	-	S	ko:K00355	ko00130,ko01110,ko05200,ko05225,ko05418,map00130,map01110,map05200,map05225,map05418	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
LNEOGEMI_01523	1.62e-87	ytcD	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_01524	1.03e-145	-	-	-	L	ko:K07497	-	ko00000	COG2801 Transposase and inactivated derivatives
LNEOGEMI_01525	2.59e-41	-	-	-	L	ko:K07483	-	ko00000	Transposase
LNEOGEMI_01528	5.37e-138	-	-	-	S	-	-	-	LXG domain of WXG superfamily
LNEOGEMI_01534	0.0	-	-	-	S	ko:K08981	-	ko00000	Bacterial PH domain
LNEOGEMI_01535	2.28e-113	-	-	-	S	ko:K09167	-	ko00000	Bacterial PH domain
LNEOGEMI_01536	3.24e-143	-	-	-	S	-	-	-	CAAX protease self-immunity
LNEOGEMI_01538	2.85e-316	-	3.2.1.86	GT4	G	ko:K01222	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
LNEOGEMI_01539	2.22e-61	-	-	-	-	-	-	-	-
LNEOGEMI_01540	1.43e-291	celD	2.7.1.207	-	G	ko:K02761,ko:K02787,ko:K02788	ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LNEOGEMI_01541	7.7e-67	-	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
LNEOGEMI_01542	1.13e-66	-	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIA subunit
LNEOGEMI_01543	6.72e-266	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
LNEOGEMI_01544	6.62e-196	-	-	-	G	-	-	-	BadF/BadG/BcrA/BcrD ATPase family
LNEOGEMI_01545	3.47e-210	-	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_01547	0.0	-	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
LNEOGEMI_01548	1.5e-202	appB	-	-	P	ko:K02033	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_01549	9.2e-214	-	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	N-terminal TM domain of oligopeptide transport permease C
LNEOGEMI_01550	1.3e-236	-	-	-	P	ko:K02031,ko:K15583,ko:K16202	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
LNEOGEMI_01551	5.8e-247	-	-	-	E	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
LNEOGEMI_01552	3.89e-284	-	-	-	E	-	-	-	Peptidase family M28
LNEOGEMI_01553	0.0	-	-	-	P	-	-	-	Sodium:sulfate symporter transmembrane region
LNEOGEMI_01554	2.3e-30	-	-	-	S	ko:K12941,ko:K21613	-	ko00000,ko01000,ko01002	Peptidase dimerisation domain
LNEOGEMI_01555	6.06e-226	-	-	-	S	ko:K12941,ko:K21613	-	ko00000,ko01000,ko01002	Peptidase dimerisation domain
LNEOGEMI_01556	1.16e-286	-	-	-	S	ko:K12941,ko:K21613	-	ko00000,ko01000,ko01002	Peptidase dimerisation domain
LNEOGEMI_01557	1.85e-115	-	-	-	-	-	-	-	-
LNEOGEMI_01559	2.16e-240	-	-	-	P	ko:K02012	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
LNEOGEMI_01560	2.2e-252	fbpC	3.6.3.30	-	P	ko:K02010,ko:K02052	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
LNEOGEMI_01561	0.0	sfuB	-	-	P	ko:K02011	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_01562	0.0	-	-	-	T	-	-	-	Histidine kinase
LNEOGEMI_01563	1.68e-177	-	-	-	T	ko:K07720	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	helix_turn_helix, arabinose operon control protein
LNEOGEMI_01564	7.75e-258	rapA	-	-	S	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	ko00000,ko00001,ko01000	Response regulator aspartate phosphatase
LNEOGEMI_01565	6.07e-165	-	-	-	S	ko:K07010	-	ko00000,ko01002	Peptidase C26
LNEOGEMI_01566	8.34e-198	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LNEOGEMI_01567	4.78e-46	-	-	-	-	-	-	-	-
LNEOGEMI_01568	6.88e-50	-	-	-	-	-	-	-	-
LNEOGEMI_01569	5.29e-26	rapA	-	-	S	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	ko00000,ko00001,ko01000	Response regulator aspartate phosphatase
LNEOGEMI_01570	3.91e-130	rapA	-	-	S	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	ko00000,ko00001,ko01000	Response regulator aspartate phosphatase
LNEOGEMI_01571	2.15e-262	-	-	-	S	ko:K07148	-	ko00000	Protein of unknown function (DUF418)
LNEOGEMI_01572	4.27e-21	-	-	-	-	-	-	-	-
LNEOGEMI_01573	1.02e-36	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
LNEOGEMI_01574	2.65e-212	-	-	-	S	ko:K06911	-	ko00000	Belongs to the pirin family
LNEOGEMI_01575	2.54e-77	ydeP9	-	-	K	-	-	-	HxlR-like helix-turn-helix
LNEOGEMI_01576	9.36e-317	-	-	-	F	-	-	-	Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine
LNEOGEMI_01577	1.66e-216	aadK	-	-	G	ko:K05593	-	ko00000,ko01000,ko01504	Streptomycin adenylyltransferase
LNEOGEMI_01578	6.56e-222	-	-	-	P	ko:K07217	-	ko00000	Catalase
LNEOGEMI_01579	5.2e-54	-	-	-	S	-	-	-	Protein of unknown function (DUF2642)
LNEOGEMI_01582	8.09e-260	rapA	-	-	S	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	ko00000,ko00001,ko01000	Response regulator aspartate phosphatase
LNEOGEMI_01583	2.35e-170	-	-	-	K	ko:K19333	-	ko00000,ko03000	Transcriptional regulator
LNEOGEMI_01584	3.07e-240	-	-	-	G	-	-	-	COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component
LNEOGEMI_01585	2.71e-109	-	-	-	G	ko:K11689	ko02020,map02020	ko00000,ko00001,ko02000	Tripartite ATP-independent periplasmic transporters, DctQ component
LNEOGEMI_01586	1.53e-276	-	-	-	G	-	-	-	Tripartite ATP-independent periplasmic transporter, DctM component
LNEOGEMI_01587	6.34e-179	-	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
LNEOGEMI_01588	6.44e-118	-	-	-	S	-	-	-	DNA-binding protein with PD1-like DNA-binding motif
LNEOGEMI_01589	0.0	-	6.2.1.3	-	IQ	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
LNEOGEMI_01590	1.03e-264	-	2.3.1.9	-	I	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Thiolase, C-terminal domain
LNEOGEMI_01591	6.52e-73	-	-	-	S	ko:K07068	-	ko00000	DUF35 OB-fold domain, acyl-CoA-associated
LNEOGEMI_01592	6.73e-305	yoaB	-	-	EGP	-	-	-	the major facilitator superfamily
LNEOGEMI_01593	2.36e-271	-	1.1.1.14	-	E	ko:K00008	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko00002,ko01000	Dehydrogenase
LNEOGEMI_01594	5.36e-172	-	-	-	IQ	-	-	-	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
LNEOGEMI_01595	1.08e-172	-	-	-	K	-	-	-	DeoR C terminal sensor domain
LNEOGEMI_01596	6.17e-104	rpiB	5.3.1.6	-	G	ko:K01808	ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribose/Galactose Isomerase
LNEOGEMI_01597	9.55e-242	dhaK	2.7.1.121	-	G	ko:K05878	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak1 domain
LNEOGEMI_01598	5.28e-146	-	2.7.1.121	-	S	ko:K05879	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak2
LNEOGEMI_01599	1.61e-224	-	3.1.3.11	-	G	ko:K02446	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
LNEOGEMI_01600	2.45e-215	-	4.3.3.7	-	EM	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Dihydrodipicolinate synthetase family
LNEOGEMI_01601	3.52e-226	-	-	-	S	-	-	-	Tripartite tricarboxylate transporter family receptor
LNEOGEMI_01603	0.0	-	-	-	S	ko:K07793	ko02020,map02020	ko00000,ko00001,ko02000	Tripartite tricarboxylate transporter TctA family
LNEOGEMI_01604	4.86e-201	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LNEOGEMI_01605	6.62e-233	-	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding protein domain
LNEOGEMI_01606	1.1e-103	-	-	-	S	-	-	-	yiaA/B two helix domain
LNEOGEMI_01607	3.73e-07	-	-	-	G	-	-	-	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LNEOGEMI_01608	1.22e-55	-	-	-	GKT	-	-	-	PRD domain
LNEOGEMI_01609	2.32e-22	-	-	-	G	-	-	-	PTS system, Lactose/Cellobiose specific IIB subunit
LNEOGEMI_01610	5.4e-136	ulaA	-	-	S	ko:K03475	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	PTS system ascorbate-specific transporter subunit IIC
LNEOGEMI_01611	7.29e-158	-	-	-	P	ko:K02012	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
LNEOGEMI_01612	2.46e-255	-	-	-	P	ko:K02011	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_01613	9.23e-161	-	3.6.3.30	-	P	ko:K02010,ko:K02052	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
LNEOGEMI_01614	7.35e-83	-	-	-	P	-	-	-	Bacterial extracellular solute-binding protein
LNEOGEMI_01615	2.89e-70	suhB	3.1.3.25	-	G	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	ko00000,ko00001,ko00002,ko01000	Inositol monophosphatase family
LNEOGEMI_01617	0.0	-	-	-	M	-	-	-	Belongs to the BCCT transporter (TC 2.A.15) family
LNEOGEMI_01618	2.31e-108	-	-	-	-	-	-	-	-
LNEOGEMI_01619	2.86e-96	-	-	-	S	-	-	-	Psort location Cytoplasmic, score
LNEOGEMI_01621	1.79e-104	-	-	-	L	ko:K19134	-	ko00000,ko02048	RAMP superfamily
LNEOGEMI_01624	7.73e-13	-	-	-	L	-	-	-	RAMP superfamily
LNEOGEMI_01625	5.49e-99	-	-	-	S	-	-	-	CRISPR-associated endoribonuclease Cas6
LNEOGEMI_01626	9.43e-162	racX	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
LNEOGEMI_01627	0.0	-	-	-	L	ko:K07012	-	ko00000,ko01000,ko02048	Metal dependent phosphohydrolases with conserved 'HD' motif.
LNEOGEMI_01629	1.4e-177	cas5	-	-	S	ko:K19119	-	ko00000,ko02048	CRISPR-associated protein (Cas_Cas5)
LNEOGEMI_01630	0.0	csd1	-	-	M	ko:K19117	-	ko00000,ko02048	CRISPR-associated protein (Cas_Csd1)
LNEOGEMI_01631	3.72e-202	csd2	-	-	L	ko:K19115,ko:K19118	-	ko00000,ko02048	CRISPR-associated protein Cas7
LNEOGEMI_01632	1.13e-152	cas4	3.1.12.1	-	L	ko:K07464	-	ko00000,ko01000,ko02048	RecB family exonuclease
LNEOGEMI_01633	1.13e-248	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
LNEOGEMI_01634	2.19e-61	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
LNEOGEMI_01635	1.03e-212	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	3'-5' exoribonuclease yhaM
LNEOGEMI_01637	1.18e-294	argG	6.3.4.5	-	E	ko:K01940	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the argininosuccinate synthase family. Type 1 subfamily
LNEOGEMI_01638	0.0	argH	4.3.2.1	-	E	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	argininosuccinate lyase
LNEOGEMI_01640	4.14e-177	ytkK	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
LNEOGEMI_01641	4.51e-84	-	-	-	-	-	-	-	-
LNEOGEMI_01642	2.05e-255	ykvY	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	COG0006 Xaa-Pro aminopeptidase
LNEOGEMI_01643	3.84e-162	ytkL	-	-	S	-	-	-	Belongs to the UPF0173 family
LNEOGEMI_01645	2.37e-308	ytoI	-	-	K	-	-	-	transcriptional regulator containing CBS domains
LNEOGEMI_01646	3.35e-11	ytpI	-	-	S	-	-	-	YtpI-like protein
LNEOGEMI_01647	3.08e-213	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	COG0618 Exopolyphosphatase-related proteins
LNEOGEMI_01648	1.03e-117	ytrI	-	-	-	-	-	-	-
LNEOGEMI_01649	4.62e-70	ytrH	-	-	S	-	-	-	Sporulation protein YtrH
LNEOGEMI_01650	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
LNEOGEMI_01651	4.23e-287	ytsJ	1.1.1.38	-	C	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	ko00000,ko00001,ko01000	Malate dehydrogenase
LNEOGEMI_01652	2.38e-148	lutR_1	-	-	K	ko:K05799	-	ko00000,ko03000	helix_turn_helix gluconate operon transcriptional repressor
LNEOGEMI_01653	1.1e-196	accD	2.1.3.15, 6.4.1.2	-	I	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
LNEOGEMI_01654	1.97e-228	accA	2.1.3.15, 6.4.1.2	-	I	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
LNEOGEMI_01655	3.27e-229	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
LNEOGEMI_01656	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
LNEOGEMI_01657	4.09e-78	fxsA	-	-	S	ko:K07113	-	ko00000	COG3030 Protein affecting phage T7 exclusion by the F plasmid
LNEOGEMI_01658	4.98e-96	-	-	-	S	-	-	-	UPF0756 membrane protein
LNEOGEMI_01659	5.73e-263	citZ	2.3.3.1	-	C	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Belongs to the citrate synthase family
LNEOGEMI_01660	3.09e-306	icd	1.1.1.42	-	C	ko:K00031	ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146	br01601,ko00000,ko00001,ko00002,ko01000	isocitrate
LNEOGEMI_01661	9.96e-217	mdh	1.1.1.27, 1.1.1.37	-	C	ko:K00016,ko:K00024	ko00010,ko00020,ko00270,ko00620,ko00630,ko00640,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04922,map00010,map00020,map00270,map00620,map00630,map00640,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200,map04922	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible oxidation of malate to oxaloacetate
LNEOGEMI_01662	2.74e-96	-	-	-	K	ko:K03719	-	ko00000,ko03000,ko03036	helix_turn_helix ASNC type
LNEOGEMI_01663	2.8e-170	phoP	-	-	T	ko:K07658	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LNEOGEMI_01664	0.0	phoR	2.7.13.3	-	T	ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Signal transduction histidine kinase
LNEOGEMI_01665	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LNEOGEMI_01666	1.4e-197	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
LNEOGEMI_01667	7.13e-134	ytaF	-	-	P	-	-	-	Probably functions as a manganese efflux pump
LNEOGEMI_01668	7.21e-129	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LNEOGEMI_01669	6.76e-246	gapB	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
LNEOGEMI_01670	1.05e-88	speH	4.1.1.50	-	E	ko:K01611	ko00270,ko00330,ko01100,map00270,map00330,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
LNEOGEMI_01671	1.6e-85	-	-	-	-	-	-	-	-
LNEOGEMI_01672	4.36e-103	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LNEOGEMI_01673	0.0	dnaB	-	-	L	ko:K03346	-	ko00000,ko03032	Membrane attachment protein
LNEOGEMI_01674	1.66e-217	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
LNEOGEMI_01675	3.19e-284	mqnC	1.21.98.1	-	H	ko:K11784	ko00130,ko01110,map00130,map01110	ko00000,ko00001,ko01000	Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2)
LNEOGEMI_01676	2.74e-207	ytxC	-	-	S	-	-	-	YtxC-like family
LNEOGEMI_01677	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LNEOGEMI_01678	5.91e-234	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
LNEOGEMI_01679	1.49e-224	-	-	-	C	-	-	-	Aldo/keto reductase family
LNEOGEMI_01680	0.0	dacC	3.4.16.4	-	M	ko:K07259	ko00550,map00550	ko00000,ko00001,ko01000,ko01002,ko01011	D-alanyl-D-alanine carboxypeptidase
LNEOGEMI_01681	2.55e-167	-	-	-	-	-	-	-	-
LNEOGEMI_01682	1.29e-296	yknX	-	-	M	ko:K02005,ko:K13888	-	ko00000,ko00002,ko02000	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LNEOGEMI_01683	2.79e-153	yknY	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
LNEOGEMI_01684	3.18e-264	yknZ	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	COG0577 ABC-type antimicrobial peptide transport system, permease component
LNEOGEMI_01685	2.34e-110	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
LNEOGEMI_01686	3.08e-39	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
LNEOGEMI_01687	5.42e-75	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
LNEOGEMI_01688	9.32e-70	ywcB	-	-	S	-	-	-	Protein of unknown function, DUF485
LNEOGEMI_01689	0.0	ywcA	-	-	S	ko:K14393	-	ko00000,ko02000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LNEOGEMI_01690	1.12e-85	ysdB	-	-	S	-	-	-	Sigma-w pathway protein YsdB
LNEOGEMI_01691	8.37e-257	ysdC	-	-	G	-	-	-	COG1363 Cellulase M and related proteins
LNEOGEMI_01692	1.53e-24	-	-	-	-	-	-	-	-
LNEOGEMI_01694	3.13e-42	sspI	-	-	S	ko:K06426	-	ko00000	Belongs to the SspI family
LNEOGEMI_01695	3.92e-164	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LNEOGEMI_01696	4.56e-244	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
LNEOGEMI_01697	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
LNEOGEMI_01698	4.31e-44	zapA	-	-	D	ko:K09888	-	ko00000,ko03036	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
LNEOGEMI_01699	8.3e-117	yshB	-	-	S	-	-	-	membrane protein, required for colicin V production
LNEOGEMI_01700	0.0	polX	-	-	L	ko:K02347	-	ko00000,ko03400	COG1796 DNA polymerase IV (family X)
LNEOGEMI_01701	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
LNEOGEMI_01702	4.19e-87	yshE	-	-	S	ko:K08989	-	ko00000	membrane
LNEOGEMI_01703	0.0	lcfA	6.2.1.3	-	IQ	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
LNEOGEMI_01704	1.59e-131	fadR	-	-	K	ko:K13770	-	ko00000,ko03000	Transcriptional regulator
LNEOGEMI_01705	3.35e-170	fadB	4.2.1.17	-	I	ko:K13767	ko00071,ko00362,ko01100,ko01120,ko01212,map00071,map00362,map01100,map01120,map01212	ko00000,ko00001,ko00002,ko01000	Belongs to the enoyl-CoA hydratase isomerase family
LNEOGEMI_01706	3.49e-172	etfB	-	-	C	ko:K03521	-	ko00000	Electron transfer flavoprotein
LNEOGEMI_01707	4.22e-219	etfA	-	-	C	ko:K03522	-	ko00000,ko04147	Electron transfer flavoprotein
LNEOGEMI_01708	1.37e-70	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
LNEOGEMI_01709	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
LNEOGEMI_01710	7.17e-99	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
LNEOGEMI_01711	2.47e-293	ktrD	-	-	P	-	-	-	COG0168 Trk-type K transport systems, membrane components
LNEOGEMI_01712	5.12e-145	sdhC	-	-	C	ko:K00241	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002	succinate dehydrogenase
LNEOGEMI_01713	0.0	sdhA	1.3.5.1, 1.3.5.4	-	C	ko:K00239	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134	ko00000,ko00001,ko00002,ko01000	succinate dehydrogenase
LNEOGEMI_01714	1.2e-185	sdhB	1.3.5.1, 1.3.5.4	-	C	ko:K00240	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	succinate dehydrogenase
LNEOGEMI_01715	1.71e-100	ysmA	-	-	S	ko:K07107	-	ko00000,ko01000	thioesterase
LNEOGEMI_01716	2.77e-45	gerE	-	-	K	ko:K01994	-	ko00000,ko03000	Transcriptional regulator
LNEOGEMI_01717	2.33e-52	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPr
LNEOGEMI_01718	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LNEOGEMI_01719	1.34e-103	ysmB	-	-	K	-	-	-	transcriptional
LNEOGEMI_01720	5.03e-191	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
LNEOGEMI_01721	3.13e-42	-	-	-	C	-	-	-	4Fe-4S binding domain
LNEOGEMI_01722	3.62e-248	ybfQ	-	-	S	ko:K07146	-	ko00000	Belongs to the UPF0176 family
LNEOGEMI_01723	4.07e-236	gerM	-	-	S	ko:K06298	-	ko00000	COG5401 Spore germination protein
LNEOGEMI_01724	1.89e-173	rph	2.7.7.56	-	J	ko:K00989	-	ko00000,ko01000,ko03016	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
LNEOGEMI_01725	5.31e-136	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LNEOGEMI_01726	6.23e-123	ysnB	-	-	S	ko:K07095	-	ko00000	Phosphoesterase
LNEOGEMI_01732	3.58e-55	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
LNEOGEMI_01733	3.92e-63	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	Required for transformation and DNA binding
LNEOGEMI_01734	6.14e-90	-	-	-	NU	ko:K02246	-	ko00000,ko00002,ko02044	general secretion pathway protein
LNEOGEMI_01736	2.01e-102	-	-	-	-	-	-	-	-
LNEOGEMI_01739	2.65e-48	B4168_0554	-	-	S	-	-	-	Protein of unknown function (DUF2626)
LNEOGEMI_01740	7.25e-153	yqgX	3.1.2.6	-	S	ko:K01069	ko00620,map00620	ko00000,ko00001,ko01000	COG0491 Zn-dependent hydrolases, including glyoxylases
LNEOGEMI_01742	8.12e-196	yqhG	-	-	S	-	-	-	Bacterial protein YqhG of unknown function
LNEOGEMI_01743	0.0	yqhH	-	-	L	-	-	-	COG0553 Superfamily II DNA RNA helicases, SNF2 family
LNEOGEMI_01744	2.23e-258	gcvT	2.1.2.10	-	E	ko:K00605	ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002,ko01000	The glycine cleavage system catalyzes the degradation of glycine
LNEOGEMI_01745	0.0	gcvPA	1.4.4.2	-	E	ko:K00282	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko01000	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
LNEOGEMI_01746	0.0	gcvPB	1.4.4.2	-	E	ko:K00283	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko01000	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
LNEOGEMI_01747	1.34e-81	yqhL	-	-	P	-	-	-	COG0607 Rhodanese-related sulfurtransferase
LNEOGEMI_01748	2.06e-195	lipM	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domain of GcvH, an intermediate carrier during protein lipoylation
LNEOGEMI_01749	0.0	uvrD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
LNEOGEMI_01750	1.4e-201	dat	2.6.1.21	-	E	ko:K00824	ko00310,ko00330,ko00360,ko00472,ko00473,ko01100,map00310,map00330,map00360,map00472,map00473,map01100	ko00000,ko00001,ko01000,ko01007	Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha- keto acid in the first half-reaction
LNEOGEMI_01751	1.43e-250	splB	4.1.99.14	-	L	ko:K03716	-	ko00000,ko01000	Spore photoproduct lyase
LNEOGEMI_01752	1.09e-99	mntR	-	-	K	ko:K03709	-	ko00000,ko03000	Involved in manganese homeostasis. Might activate the transcription of the mntABCD operon
LNEOGEMI_01753	9.09e-208	yqhO	-	-	S	ko:K07001	-	ko00000	esterase of the alpha-beta hydrolase superfamily
LNEOGEMI_01754	3.09e-73	-	-	-	-	-	-	-	-
LNEOGEMI_01755	4.24e-114	yqhR	-	-	S	-	-	-	Conserved membrane protein YqhR
LNEOGEMI_01756	3.62e-247	yqhT	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	COG0006 Xaa-Pro aminopeptidase
LNEOGEMI_01757	7.96e-127	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LNEOGEMI_01758	8.98e-122	aroK	2.7.1.71	-	F	ko:K00891	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
LNEOGEMI_01759	2.02e-63	-	-	-	S	-	-	-	YfzA-like protein
LNEOGEMI_01760	2.71e-48	yqhV	-	-	S	-	-	-	Protein of unknown function (DUF2619)
LNEOGEMI_01761	2.08e-211	spoIIIAA	-	-	S	ko:K06390	-	ko00000	stage III sporulation protein AA
LNEOGEMI_01762	1.63e-105	spoIIIAB	-	-	S	ko:K06391	-	ko00000	Stage III sporulation protein
LNEOGEMI_01763	1.98e-40	spoIIIAC	-	-	S	ko:K06392	-	ko00000	stage III sporulation protein AC
LNEOGEMI_01764	6.3e-54	spoIIIAD	-	-	S	ko:K06393	-	ko00000	Stage III sporulation protein AD
LNEOGEMI_01765	1.32e-256	spoIIIAE	-	-	S	ko:K06394	-	ko00000	stage III sporulation protein AE
LNEOGEMI_01766	6.05e-116	spoIIIAF	-	-	S	ko:K06395	-	ko00000	Stage III sporulation protein AF (Spore_III_AF)
LNEOGEMI_01767	2.88e-144	spoIIIAG	-	-	S	ko:K06396	-	ko00000	stage III sporulation protein AG
LNEOGEMI_01768	1.41e-115	spoIIIAH	-	-	S	ko:K06397	-	ko00000	SpoIIIAH-like protein
LNEOGEMI_01769	3.08e-74	-	-	-	-	-	-	-	-
LNEOGEMI_01770	9.19e-99	accB	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
LNEOGEMI_01771	0.0	accC	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
LNEOGEMI_01772	8.13e-85	yqhY	-	-	S	-	-	-	protein conserved in bacteria
LNEOGEMI_01773	3.22e-85	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LNEOGEMI_01774	1.04e-270	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LNEOGEMI_01775	2.03e-47	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LNEOGEMI_01776	1.56e-199	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
LNEOGEMI_01777	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
LNEOGEMI_01778	6.11e-189	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	rRNA methylase
LNEOGEMI_01779	2.64e-103	argR	-	-	K	ko:K03402	-	ko00000,ko03000	Regulates arginine biosynthesis genes
LNEOGEMI_01780	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
LNEOGEMI_01781	1.71e-300	spoIVB	3.4.21.116	-	M	ko:K06399	-	ko00000,ko01000,ko01002	Stage IV sporulation protein B
LNEOGEMI_01782	4.46e-183	spo0A	-	-	KT	ko:K07699	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process
LNEOGEMI_01783	2.54e-139	-	-	-	M	-	-	-	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LNEOGEMI_01784	5.51e-47	yqzF	-	-	S	-	-	-	Protein of unknown function (DUF2627)
LNEOGEMI_01785	0.0	bkdR	-	-	KT	-	-	-	Transcriptional regulator
LNEOGEMI_01786	8.44e-262	ldh	1.4.1.9	-	E	ko:K00263	ko00280,ko00290,ko01100,ko01110,ko01130,map00280,map00290,map01100,map01110,map01130	ko00000,ko00001,ko01000	Belongs to the Glu Leu Phe Val dehydrogenases family
LNEOGEMI_01787	0.0	bfmBC	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
LNEOGEMI_01788	4.89e-238	bfmBAA	1.2.4.4	-	C	ko:K00166	ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130	br01601,ko00000,ko00001,ko00002,ko01000	COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
LNEOGEMI_01789	2.22e-231	bfmBAB	1.2.4.4	-	C	ko:K00167,ko:K21417	ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130	br01601,ko00000,ko00001,ko00002,ko01000	COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
LNEOGEMI_01790	5.09e-283	bkdB	2.3.1.12, 2.3.1.168	-	C	ko:K00627,ko:K09699	ko00010,ko00020,ko00280,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00280,map00620,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
LNEOGEMI_01791	2.39e-98	yqiW	-	-	S	-	-	-	Belongs to the UPF0403 family
LNEOGEMI_01792	1.2e-65	-	-	-	S	-	-	-	Family of unknown function (DUF5391)
LNEOGEMI_01793	3.01e-73	yxeA	-	-	S	-	-	-	Protein of unknown function (DUF1093)
LNEOGEMI_01794	9.93e-285	ybfB	-	-	G	-	-	-	COG0477 Permeases of the major facilitator superfamily
LNEOGEMI_01795	4.01e-260	rlmN	2.1.1.192	-	J	ko:K06941	-	ko00000,ko01000,ko03009	Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
LNEOGEMI_01796	4.62e-311	kynU	3.7.1.3	-	E	ko:K01556	ko00380,ko01100,map00380,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively
LNEOGEMI_01797	7.78e-150	kynB	3.5.1.9	-	S	ko:K07130	ko00380,ko00630,ko01100,map00380,map00630,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
LNEOGEMI_01798	6.1e-197	kynA	1.13.11.11	-	E	ko:K00453	ko00380,ko01100,map00380,map01100	ko00000,ko00001,ko00002,ko01000	Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety
LNEOGEMI_01799	8.29e-255	-	-	-	E	ko:K06296	-	ko00000,ko02000	Spore germination protein
LNEOGEMI_01801	6.22e-267	gerAC1	-	-	S	ko:K06297	-	ko00000	spore germination
LNEOGEMI_01802	0.0	gerKA	-	-	EG	ko:K06295	-	ko00000	Spore germination protein
LNEOGEMI_01803	3.94e-171	-	-	-	K	-	-	-	DeoR C terminal sensor domain
LNEOGEMI_01804	6.68e-300	-	2.7.1.219, 2.7.1.220	-	S	ko:K22129	-	ko00000,ko01000	Putative nucleotide-binding of sugar-metabolising enzyme
LNEOGEMI_01805	4.19e-238	pdxA	1.1.1.408, 1.1.1.409	-	H	ko:K22024	-	ko00000,ko01000	Belongs to the PdxA family
LNEOGEMI_01806	6.02e-280	gntP	-	-	EG	ko:K03299	-	ko00000,ko02000	GntP family permease
LNEOGEMI_01807	7.76e-195	araQ5	-	-	P	ko:K10190,ko:K10242	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PFAM binding-protein-dependent transport systems inner membrane component
LNEOGEMI_01808	2.42e-208	cebF	-	-	P	ko:K10189,ko:K10241,ko:K17235	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PFAM binding-protein-dependent transport systems inner membrane component
LNEOGEMI_01809	8.16e-291	lacE3	-	-	G	ko:K10240	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PFAM extracellular solute-binding protein family 1
LNEOGEMI_01812	9.78e-317	argE	-	-	E	ko:K20895	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Acetylornithine deacetylase
LNEOGEMI_01813	2.06e-159	tenA	3.5.99.2	-	K	ko:K03707	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03000	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LNEOGEMI_01814	8.17e-244	-	-	-	G	-	-	-	Acyltransferase family
LNEOGEMI_01815	5.45e-205	-	-	-	P	-	-	-	YhfZ C-terminal domain
LNEOGEMI_01816	2.33e-74	-	-	-	S	-	-	-	PRD domain
LNEOGEMI_01817	4e-76	-	-	-	S	-	-	-	Protein of unknown function DUF2620
LNEOGEMI_01818	9.85e-283	-	-	-	S	-	-	-	Protein of unknown function
LNEOGEMI_01819	1.13e-218	php	-	-	S	ko:K07048	-	ko00000	Phosphotriesterase family
LNEOGEMI_01820	6.17e-261	-	-	-	E	-	-	-	Cys/Met metabolism PLP-dependent enzyme
LNEOGEMI_01821	8.68e-277	-	-	-	E	-	-	-	Alanine racemase, N-terminal domain
LNEOGEMI_01822	8.85e-287	-	-	-	G	-	-	-	Metalloenzyme superfamily
LNEOGEMI_01823	0.0	-	-	-	O	-	-	-	DnaJ molecular chaperone homology domain
LNEOGEMI_01824	0.0	hscC	-	-	O	ko:K04045	-	ko00000,ko03110	Hsp70 protein
LNEOGEMI_01825	1.89e-181	butA	1.1.1.304, 1.1.1.76	-	IQ	ko:K03366	ko00650,map00650	ko00000,ko00001,ko01000	Enoyl-(Acyl carrier protein) reductase
LNEOGEMI_01826	1.32e-193	ydeO	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2179)
LNEOGEMI_01827	8.33e-187	ylmA	3.6.3.34	-	P	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	COG1119 ABC-type molybdenum transport system, ATPase component photorepair protein PhrA
LNEOGEMI_01828	5.83e-221	-	-	-	K	-	-	-	AraC-like ligand binding domain
LNEOGEMI_01829	8.31e-313	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
LNEOGEMI_01830	3.52e-195	M1-465	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_01831	1.29e-202	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_01832	1.48e-64	esxA	-	-	S	-	-	-	Belongs to the WXG100 family
LNEOGEMI_01833	7.61e-52	yukD	-	-	S	-	-	-	WXG100 protein secretion system (Wss), protein YukD
LNEOGEMI_01834	4.04e-273	essB	-	-	S	-	-	-	WXG100 protein secretion system (Wss), protein YukC
LNEOGEMI_01835	0.0	essC	-	-	D	ko:K03466	-	ko00000,ko03036	COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
LNEOGEMI_01836	0.0	yueB	-	-	S	-	-	-	domain protein
LNEOGEMI_01837	2.51e-93	-	-	-	S	-	-	-	Family of unknown function (DUF5383)
LNEOGEMI_01838	4.22e-60	-	-	-	-	-	-	-	-
LNEOGEMI_01839	2.34e-63	-	-	-	-	-	-	-	-
LNEOGEMI_01840	1.95e-97	-	-	-	-	-	-	-	-
LNEOGEMI_01841	6.77e-312	-	-	-	S	-	-	-	nuclease activity
LNEOGEMI_01843	7.37e-63	-	-	-	-	-	-	-	-
LNEOGEMI_01844	1.37e-07	-	-	-	-	-	-	-	-
LNEOGEMI_01845	7.35e-220	-	-	-	G	-	-	-	Glycoside hydrolase family 16
LNEOGEMI_01846	2.4e-74	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
LNEOGEMI_01847	6.78e-73	-	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 type transporter
LNEOGEMI_01849	2.1e-179	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
LNEOGEMI_01850	9.26e-149	nanE	5.1.3.9	-	G	ko:K01788	ko00520,map00520	ko00000,ko00001,ko01000	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
LNEOGEMI_01851	0.0	ptsG	2.7.1.199, 2.7.1.208	-	G	ko:K02777,ko:K02778,ko:K02779,ko:K02790,ko:K02791	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
LNEOGEMI_01852	9.03e-297	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
LNEOGEMI_01853	3.09e-101	scdA	-	-	D	ko:K07322	-	ko00000	Di-iron-containing protein involved in the repair of iron-sulfur clusters
LNEOGEMI_01854	0.0	narG	1.7.5.1	-	C	ko:K00370	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
LNEOGEMI_01855	0.0	narH	1.7.5.1	-	C	ko:K00371	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	Nitrate reductase, beta
LNEOGEMI_01856	1.08e-147	narJ	-	-	C	ko:K00373	ko02020,map02020	ko00000,ko00001	Nitrate reductase delta subunit
LNEOGEMI_01857	1.28e-160	narI	1.7.5.1	-	C	ko:K00374	ko00910,ko01120,ko02020,map00910,map01120,map02020	ko00000,ko00001,ko00002,ko01000	nitrate reductase, gamma subunit
LNEOGEMI_01858	5.89e-108	nreA	-	-	T	ko:K10851	ko02020,map02020	ko00000,ko00001	phosphoenolpyruvate-protein phosphotransferase activity
LNEOGEMI_01859	3.51e-251	nreB	2.7.13.3	-	T	ko:K07683,ko:K07777	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Member of the two-component regulatory system DegS DegU, which plays an important role in the transition growth phase
LNEOGEMI_01860	6.59e-143	nreC	-	-	T	ko:K07696	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
LNEOGEMI_01861	0.0	narK	-	-	P	ko:K02575,ko:K10850	ko00910,ko02020,map00910,map02020	ko00000,ko00001,ko00002,ko02000	COG2223 Nitrate nitrite transporter
LNEOGEMI_01862	5.72e-156	-	-	-	S	-	-	-	YwiC-like protein
LNEOGEMI_01863	0.0	-	-	-	G	ko:K17318	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
LNEOGEMI_01864	0.0	-	2.7.13.3	-	T	ko:K07718	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
LNEOGEMI_01865	2.52e-282	-	-	-	T	ko:K07720	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	cheY-homologous receiver domain
LNEOGEMI_01866	2.63e-218	-	-	-	G	ko:K17319	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_01867	3.58e-204	ytcP1	-	-	U	ko:K17320	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_01868	3.84e-51	-	-	-	-	-	-	-	-
LNEOGEMI_01869	4.93e-129	yvrI	-	-	K	ko:K03093	-	ko00000,ko03021	RNA polymerase
LNEOGEMI_01870	9.59e-140	apl	3.1.3.1	-	S	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	SNARE associated Golgi protein
LNEOGEMI_01871	9.6e-317	melA	3.2.1.22	-	G	ko:K07406	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	Family 4 glycosyl hydrolase
LNEOGEMI_01872	3.49e-216	-	-	-	K	-	-	-	AraC-like ligand binding domain
LNEOGEMI_01873	2.36e-245	des	1.14.19.23, 1.14.19.45	-	I	ko:K10255	ko02020,map02020	ko00000,ko00001,ko01000,ko01004	fatty acid desaturase
LNEOGEMI_01874	3.85e-242	desK	2.7.13.3	-	T	ko:K07778	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
LNEOGEMI_01875	1.21e-137	desR	-	-	T	ko:K07693	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
LNEOGEMI_01876	5.17e-281	mgtE	-	-	P	ko:K06213	-	ko00000,ko02000	Acts as a magnesium transporter
LNEOGEMI_01877	8.78e-99	-	-	-	K	ko:K15973	-	ko00000,ko03000	transcriptional
LNEOGEMI_01878	1.85e-71	-	-	-	-	-	-	-	-
LNEOGEMI_01879	8.17e-114	-	3.1.1.29	-	K	ko:K01056	-	ko00000,ko01000,ko03012	-acetyltransferase
LNEOGEMI_01880	8.87e-307	-	-	-	EK	-	-	-	Alanine-glyoxylate amino-transferase
LNEOGEMI_01881	5.3e-104	yvbK	-	-	K	-	-	-	acetyltransferase
LNEOGEMI_01882	3.43e-187	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine aminopeptidase
LNEOGEMI_01883	1.21e-104	-	-	-	S	-	-	-	COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LNEOGEMI_01884	1.32e-254	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
LNEOGEMI_01885	4.61e-235	-	-	-	KT	ko:K02647	-	ko00000,ko03000	Sugar diacid utilization regulator
LNEOGEMI_01886	1.13e-250	yetN	-	-	S	-	-	-	Protein of unknown function (DUF3900)
LNEOGEMI_01887	3.95e-160	-	-	-	-	-	-	-	-
LNEOGEMI_01888	4.33e-146	ppiB	5.2.1.8	-	O	ko:K01802,ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LNEOGEMI_01889	2.23e-235	qor	1.1.1.1, 1.6.5.5	-	C	ko:K00001,ko:K00344	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
LNEOGEMI_01890	4.18e-196	hisJ3	3.1.3.15	-	E	ko:K04486	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	PHP domain
LNEOGEMI_01891	0.0	prtS	3.4.21.110, 3.4.21.96	-	O	ko:K01361,ko:K08652,ko:K14647	ko02024,map02024	ko00000,ko00001,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
LNEOGEMI_01892	3.7e-123	sipW	3.4.21.89	-	U	ko:K13280	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	Signal peptidase
LNEOGEMI_01893	1.76e-165	-	-	-	-	ko:K06336	-	ko00000,ko01002	-
LNEOGEMI_01894	1.19e-121	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Methyladenine glycosylase
LNEOGEMI_01895	2.62e-167	tenA	3.5.99.2	-	K	ko:K03707	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03000	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LNEOGEMI_01896	4.06e-223	-	-	-	S	ko:K07035	-	ko00000	Phosphotransferase system, EIIC
LNEOGEMI_01897	6.51e-179	-	-	-	P	-	-	-	COG0861 Membrane protein TerC, possibly involved in tellurium resistance
LNEOGEMI_01898	2.87e-216	yfhM	3.8.1.5	-	S	ko:K01563	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Alpha beta hydrolase
LNEOGEMI_01899	3.1e-286	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LNEOGEMI_01901	3.78e-252	aprE	3.4.21.62	-	O	ko:K01342	ko02024,map02024	ko00000,ko00001,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
LNEOGEMI_01902	1.29e-297	-	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix XRE-family like proteins
LNEOGEMI_01903	7.23e-135	cwlK	-	-	M	ko:K17733	-	ko00000,ko01000,ko01002,ko01011	Peptidase M15B and M15C DD-carboxypeptidase VanY endolysin
LNEOGEMI_01904	8.98e-317	-	-	-	E	ko:K03294,ko:K14052	-	ko00000,ko02000	Amino acid permease
LNEOGEMI_01905	9.49e-157	sseA	2.8.1.1, 2.8.1.2	-	P	ko:K01011	ko00270,ko00920,ko01100,ko01120,ko04122,map00270,map00920,map01100,map01120,map04122	ko00000,ko00001,ko01000	sulfurtransferase
LNEOGEMI_01906	3.08e-283	yukF	-	-	QT	-	-	-	Transcriptional regulator
LNEOGEMI_01907	5.34e-249	ald	1.4.1.1	-	E	ko:K00259	ko00250,ko00430,ko01100,map00250,map00430,map01100	ko00000,ko00001,ko01000	Belongs to the AlaDH PNT family
LNEOGEMI_01908	1.55e-253	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	6-phosphogluconolactonase
LNEOGEMI_01909	5.77e-194	rarD	-	-	S	ko:K05786	-	ko00000,ko02000	-transporter
LNEOGEMI_01910	5.9e-193	dppA	-	-	E	ko:K16203	-	ko00000,ko01000,ko01002	D-aminopeptidase
LNEOGEMI_01911	6.65e-207	dppB	-	-	P	ko:K16200	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
LNEOGEMI_01912	1e-220	dppC	-	-	EP	ko:K16201	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
LNEOGEMI_01913	2.13e-231	dppD	-	-	P	ko:K02031,ko:K16202	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
LNEOGEMI_01914	0.0	dppE	-	-	E	ko:K16199	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
LNEOGEMI_01915	3.24e-221	ykfA	3.4.17.13	-	V	ko:K01297	-	ko00000,ko01000,ko01002,ko01011	proteins, homologs of microcin C7 resistance protein MccF
LNEOGEMI_01916	3.2e-211	ykfC	3.4.14.13	-	M	ko:K20742	-	ko00000,ko01000,ko01002	COG0791 Cell wall-associated hydrolases (invasion-associated proteins)
LNEOGEMI_01917	1.89e-230	ykfD	-	-	E	ko:K02032,ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
LNEOGEMI_01918	9.78e-78	hxlR	-	-	K	-	-	-	transcriptional
LNEOGEMI_01919	9.96e-141	XK27_02070	-	-	S	ko:K07078	-	ko00000	Nitroreductase family
LNEOGEMI_01920	1.77e-167	-	-	-	T	-	-	-	Universal stress protein family
LNEOGEMI_01921	0.0	mrpA	-	-	CP	ko:K05565	-	ko00000,ko02000	COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit
LNEOGEMI_01922	5.43e-85	mnhB2	-	-	P	ko:K05566	-	ko00000,ko02000	antiporter activity
LNEOGEMI_01923	1.85e-66	mnhC	-	-	P	ko:K05567	-	ko00000,ko02000	Subunit C of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
LNEOGEMI_01924	0.0	mrpD	-	-	CP	ko:K05568	-	ko00000,ko02000	Subunit D of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
LNEOGEMI_01925	8.09e-111	mnhE2	-	-	P	ko:K05569	-	ko00000,ko02000	Na+/H+ ion antiporter subunit
LNEOGEMI_01926	2.23e-51	mnhF2	-	-	P	ko:K05570	-	ko00000,ko02000	Subunit F of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
LNEOGEMI_01927	2.2e-77	-	-	-	P	ko:K05571	-	ko00000,ko02000	COG1320 Multisubunit Na H antiporter, MnhG subunit
LNEOGEMI_01928	2.62e-201	-	-	-	S	-	-	-	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
LNEOGEMI_01929	1.21e-246	-	-	-	G	-	-	-	Xylose isomerase
LNEOGEMI_01930	3.47e-244	-	-	-	S	-	-	-	Oxidoreductase family, C-terminal alpha/beta domain
LNEOGEMI_01931	1.56e-175	-	-	-	G	-	-	-	Xylose isomerase-like TIM barrel
LNEOGEMI_01932	1.27e-272	-	-	-	S	ko:K09927	-	ko00000	Winged helix DNA-binding domain
LNEOGEMI_01933	8e-137	-	-	-	S	-	-	-	Integral membrane protein
LNEOGEMI_01934	1.01e-62	-	-	-	-	-	-	-	-
LNEOGEMI_01935	1.44e-177	yodJ	3.4.17.14	-	M	ko:K07260	ko00550,ko01100,ko01502,ko02020,map00550,map01100,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	D-alanyl-D-alanine carboxypeptidase
LNEOGEMI_01936	0.0	yqgS	2.7.8.20	-	M	ko:K01138,ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Belongs to the LTA synthase family
LNEOGEMI_01937	3.34e-131	-	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LNEOGEMI_01938	6.53e-171	ydcA	-	-	S	-	-	-	membrane protein (homolog of Drosophila rhomboid)
LNEOGEMI_01939	2.81e-76	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
LNEOGEMI_01940	1.7e-237	ydcC	-	-	M	-	-	-	COG2834 Outer membrane lipoprotein-sorting protein
LNEOGEMI_01941	4.05e-285	alr	5.1.1.1, 5.1.1.5	-	E	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LNEOGEMI_01942	4.38e-35	ndoAI	-	-	K	ko:K07723	-	ko00000,ko02048,ko03000	transcriptional regulators containing the CopG Arc MetJ DNA-binding domain and a metal-binding domain
LNEOGEMI_01943	8.86e-74	ndoA	-	-	L	ko:K07171	-	ko00000,ko01000,ko02048	Toxic component of a toxin-antitoxin (TA) module
LNEOGEMI_01944	2.86e-179	rsbR	-	-	T	ko:K17763	-	ko00000,ko03021	Positive regulator of sigma-B
LNEOGEMI_01945	2.21e-69	rsbS	-	-	T	ko:K17762	-	ko00000,ko03021	antagonist
LNEOGEMI_01946	5.84e-95	rsbT	2.7.11.1	-	T	ko:K17752	-	ko00000,ko01000,ko01001,ko03021	COG2172 Anti-sigma regulatory factor (Ser Thr protein kinase)
LNEOGEMI_01947	6.63e-234	rsbU	3.1.3.3	-	KT	ko:K07315	-	ko00000,ko01000,ko03021	phosphatase
LNEOGEMI_01948	1.39e-70	rsbV	-	-	T	ko:K04749	-	ko00000,ko03021	Belongs to the anti-sigma-factor antagonist family
LNEOGEMI_01949	6.56e-107	rsbW	2.7.11.1	-	T	ko:K04757	-	ko00000,ko01000,ko01001,ko03021	Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B)
LNEOGEMI_01950	1.49e-180	sigB	-	-	K	ko:K03090	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LNEOGEMI_01951	5.95e-147	rsbX	3.1.3.3	-	KT	ko:K05518	-	ko00000,ko01000,ko03021	Sigma factor PP2C-like phosphatases
LNEOGEMI_01952	0.0	tex	-	-	K	ko:K06959	-	ko00000	COG2183 Transcriptional accessory protein
LNEOGEMI_01953	3.43e-13	-	-	-	-	-	-	-	-
LNEOGEMI_01954	1.4e-114	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
LNEOGEMI_01962	3.12e-123	yokH	-	-	G	-	-	-	SMI1 / KNR4 family
LNEOGEMI_01963	3.55e-59	-	-	-	KQ	-	-	-	helix_turn_helix, mercury resistance
LNEOGEMI_01964	1.72e-125	yrkC	-	-	G	-	-	-	Cupin domain
LNEOGEMI_01965	5.94e-123	-	-	-	S	-	-	-	TraX protein
LNEOGEMI_01966	0.0	sdcS	-	-	P	ko:K14445	-	ko00000,ko02000	Sodium:sulfate symporter transmembrane region
LNEOGEMI_01967	4.94e-163	dcuR	-	-	T	ko:K02475,ko:K11615	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG4565 Response regulator of citrate malate metabolism
LNEOGEMI_01968	0.0	-	2.7.13.3	-	T	ko:K02476,ko:K11614,ko:K11637	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Signal transduction histidine kinase regulating citrate malate metabolism
LNEOGEMI_01969	1.84e-147	M1-740	-	-	I	-	-	-	COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes
LNEOGEMI_01970	2.24e-211	-	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	nucleoside hydrolase
LNEOGEMI_01971	7.81e-78	-	-	-	S	-	-	-	CHY zinc finger
LNEOGEMI_01972	1.03e-286	brnQ	-	-	E	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
LNEOGEMI_01977	4.64e-09	sdpI	-	-	S	-	-	-	integral membrane protein
LNEOGEMI_01978	7.36e-105	-	-	-	EGP	-	-	-	Transmembrane secretion effector
LNEOGEMI_01979	3.06e-146	-	-	-	EGP	-	-	-	Transmembrane secretion effector
LNEOGEMI_01980	2.28e-123	-	-	-	S	ko:K09962	-	ko00000	protein conserved in bacteria
LNEOGEMI_01981	2.57e-124	ubiE	-	-	Q	-	-	-	Methyltransferase type 11
LNEOGEMI_01983	9.16e-301	-	-	-	S	ko:K03308	-	ko00000	Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
LNEOGEMI_01984	2.2e-60	phhB	3.5.4.33, 4.2.1.96	-	H	ko:K01724,ko:K11991	ko00790,map00790	ko00000,ko00001,ko01000,ko03016,ko04147	pterin-4-alpha-carbinolamine dehydratase
LNEOGEMI_01985	1.04e-75	eaeH	-	-	M	ko:K13735	ko05100,map05100	ko00000,ko00001	LysM domain
LNEOGEMI_01986	1.38e-88	-	-	-	S	-	-	-	YtkA-like
LNEOGEMI_01987	0.0	-	-	-	T	-	-	-	Histidine kinase
LNEOGEMI_01988	9.73e-155	-	-	-	T	ko:K02483	-	ko00000,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LNEOGEMI_01989	5.23e-231	-	-	-	S	-	-	-	amine dehydrogenase activity
LNEOGEMI_01990	5.17e-239	-	-	-	P	ko:K03449	-	ko00000,ko02000	COG2807 Cyanate permease
LNEOGEMI_01992	8.09e-44	-	-	-	-	-	-	-	-
LNEOGEMI_01993	5.33e-67	-	-	-	S	-	-	-	Bacterial PH domain
LNEOGEMI_01994	3.06e-40	-	-	-	-	-	-	-	-
LNEOGEMI_01996	4.03e-127	M1-1017	-	-	S	-	-	-	Protein of unknown function (DUF1129)
LNEOGEMI_01997	3.5e-70	-	-	-	K	ko:K10947	-	ko00000,ko03000	Transcriptional regulator
LNEOGEMI_01998	3.74e-134	-	-	-	S	-	-	-	DUF218 domain
LNEOGEMI_01999	1.61e-190	degV	-	-	S	-	-	-	protein conserved in bacteria
LNEOGEMI_02000	0.0	mutS1	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
LNEOGEMI_02001	1.33e-52	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LNEOGEMI_02002	1.12e-288	yciC	-	-	S	-	-	-	GTPases (G3E family)
LNEOGEMI_02003	4.46e-165	deoD	2.4.2.1	-	F	ko:K03784	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Purine nucleoside phosphorylase
LNEOGEMI_02004	7.83e-240	mhqA	-	-	E	ko:K15975	-	ko00000	COG0346 Lactoylglutathione lyase and related lyases
LNEOGEMI_02005	0.0	-	4.1.1.61, 4.1.1.98	-	H	ko:K01612,ko:K03182	ko00130,ko00627,ko01100,ko01110,ko01120,ko01220,map00130,map00627,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the UbiD family
LNEOGEMI_02006	8.72e-147	scoB	2.8.3.5	-	I	ko:K01029	ko00072,ko00280,ko00650,map00072,map00280,map00650	ko00000,ko00001,ko01000	COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit
LNEOGEMI_02007	8.68e-168	scoA	2.8.3.5	-	I	ko:K01028	ko00072,ko00280,ko00650,map00072,map00280,map00650	ko00000,ko00001,ko01000	COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
LNEOGEMI_02008	1.08e-306	atoE	-	-	I	ko:K02106	ko02020,map02020	ko00000,ko00001	Short chain fatty acid transporter
LNEOGEMI_02009	1.92e-241	malR	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_02010	3.96e-190	malG	-	-	P	ko:K15772	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	transport
LNEOGEMI_02011	3.68e-314	-	-	-	P	ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1175 ABC-type sugar transport systems, permease components
LNEOGEMI_02012	2.63e-302	malE	-	-	G	ko:K02027,ko:K15770,ko:K17237	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG2182 Maltose-binding periplasmic proteins domains
LNEOGEMI_02013	0.0	nplT	3.2.1.133, 3.2.1.135, 3.2.1.54	GH13	G	ko:K01208	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, N-terminal ig-like domain
LNEOGEMI_02014	8.2e-306	codA	3.5.4.1	-	F	ko:K01485	ko00240,ko00330,ko01100,map00240,map00330,map01100	ko00000,ko00001,ko01000	Amidohydrolase family
LNEOGEMI_02015	3.42e-282	codB	-	-	F	ko:K10974	-	ko00000,ko02000	cytosine purines uracil thiamine allantoin
LNEOGEMI_02016	0.0	-	-	-	QT	ko:K09684	-	ko00000,ko03000	COG2508 Regulator of polyketide synthase expression
LNEOGEMI_02017	3.89e-285	lhgO	1.1.5.3	-	S	ko:K00111,ko:K15736	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	FAD dependent oxidoreductase
LNEOGEMI_02018	3.34e-278	-	-	-	C	ko:K11473	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001	Glycolate oxidase
LNEOGEMI_02019	0.0	-	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	Glycolate oxidase subunit
LNEOGEMI_02020	2.38e-151	-	-	-	K	-	-	-	COG2186 Transcriptional regulators
LNEOGEMI_02021	3.47e-153	-	-	-	K	ko:K05799	-	ko00000,ko03000	FCD
LNEOGEMI_02022	0.0	-	-	-	S	-	-	-	Tripartite ATP-independent periplasmic transporter, DctM component
LNEOGEMI_02023	8.42e-235	-	-	-	S	ko:K07080	-	ko00000	NMT1-like family
LNEOGEMI_02024	9.4e-199	citR	-	-	K	ko:K19242	-	ko00000,ko03000	Transcriptional regulator
LNEOGEMI_02025	2.52e-243	citA	2.3.3.1	-	C	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	br01601,ko00000,ko00001,ko00002,ko01000	Belongs to the citrate synthase family
LNEOGEMI_02026	2.43e-270	-	-	-	G	-	-	-	COG1593 TRAP-type C4-dicarboxylate transport system, large permease component
LNEOGEMI_02027	1e-96	-	-	-	G	-	-	-	Tripartite ATP-independent periplasmic transporters, DctQ component
LNEOGEMI_02028	5.08e-237	-	-	-	G	-	-	-	Bacterial extracellular solute-binding protein, family 7
LNEOGEMI_02029	5.63e-154	kdgR	-	-	K	-	-	-	FCD
LNEOGEMI_02030	7.95e-250	yjmC	1.1.1.350	-	C	ko:K00073	ko00230,ko01120,map00230,map01120	ko00000,ko00001,ko01000	Belongs to the LDH2 MDH2 oxidoreductase family
LNEOGEMI_02031	0.0	mcpA	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis protein
LNEOGEMI_02032	3.62e-116	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
LNEOGEMI_02033	3.67e-120	-	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
LNEOGEMI_02034	2.48e-231	-	-	-	S	-	-	-	Domain of unknown function (DUF4179)
LNEOGEMI_02035	4.83e-98	-	-	-	S	-	-	-	Domain of unknown function (DU1801)
LNEOGEMI_02036	1.84e-145	-	-	-	S	-	-	-	CGNR zinc finger
LNEOGEMI_02038	1.64e-108	-	-	-	-	-	-	-	-
LNEOGEMI_02039	4.74e-21	-	-	-	K	ko:K07729	-	ko00000,ko03000	transcriptional
LNEOGEMI_02041	0.0	-	-	-	T	-	-	-	Carbon starvation protein
LNEOGEMI_02042	2.58e-173	-	-	-	T	ko:K07705	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG3279 Response regulator of the LytR AlgR family
LNEOGEMI_02043	0.0	lytS	2.7.13.3	-	T	ko:K07704	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
LNEOGEMI_02044	2.98e-135	-	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_02045	0.0	ydfJ	-	-	S	ko:K07003	-	ko00000	MMPL family
LNEOGEMI_02046	3.55e-262	-	-	-	S	-	-	-	domain protein
LNEOGEMI_02047	8.4e-234	oppF3	-	-	E	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
LNEOGEMI_02048	8.96e-226	oppD3	-	-	P	ko:K02031,ko:K16202	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
LNEOGEMI_02049	2.95e-211	-	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
LNEOGEMI_02050	7.33e-221	appB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
LNEOGEMI_02051	0.0	-	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
LNEOGEMI_02052	5.96e-12	-	-	-	-	-	-	-	-
LNEOGEMI_02053	1.21e-173	-	-	-	S	-	-	-	Sulfite exporter TauE/SafE
LNEOGEMI_02054	2.73e-25	-	-	-	-	-	-	-	-
LNEOGEMI_02055	2.29e-225	-	-	-	L	ko:K07496	-	ko00000	Transposase
LNEOGEMI_02056	1.24e-118	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
LNEOGEMI_02058	4.51e-156	-	-	-	G	-	-	-	Class II Aldolase and Adducin N-terminal domain
LNEOGEMI_02059	4e-267	-	-	-	G	-	-	-	COG1593 TRAP-type C4-dicarboxylate transport system, large permease component
LNEOGEMI_02060	1.01e-98	-	-	-	G	-	-	-	Tripartite ATP-independent periplasmic transporters, DctQ component
LNEOGEMI_02061	6.64e-234	-	-	-	G	-	-	-	COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component
LNEOGEMI_02062	1.4e-238	tdh	1.1.1.14	-	E	ko:K00008	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko00002,ko01000	Dehydrogenase
LNEOGEMI_02063	4.89e-141	-	-	-	K	-	-	-	FCD domain
LNEOGEMI_02064	1.36e-303	-	2.7.1.219, 2.7.1.220	-	S	ko:K22129	-	ko00000,ko01000	Putative nucleotide-binding of sugar-metabolising enzyme
LNEOGEMI_02065	2.64e-203	-	-	-	-	-	-	-	-
LNEOGEMI_02066	9.68e-172	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
LNEOGEMI_02067	2.67e-165	-	-	-	Q	ko:K15256	-	ko00000,ko01000,ko03016	O-methyltransferase
LNEOGEMI_02068	1.06e-71	-	-	-	L	-	-	-	Restriction endonuclease
LNEOGEMI_02069	4.53e-46	-	-	-	-	-	-	-	-
LNEOGEMI_02070	3.14e-147	-	-	-	S	ko:K07043	-	ko00000	WLM domain
LNEOGEMI_02071	0.0	hsdR	3.1.21.3	-	L	ko:K01153	-	ko00000,ko01000,ko02048	Subunit R is required for both nuclease and ATPase activities, but not for modification
LNEOGEMI_02072	4.52e-139	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
LNEOGEMI_02073	5.85e-169	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
LNEOGEMI_02074	4.05e-266	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
LNEOGEMI_02075	9.29e-253	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
LNEOGEMI_02076	0.0	ytgP	-	-	S	ko:K03328,ko:K06409	-	ko00000,ko02000	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
LNEOGEMI_02077	5.13e-209	yvrE	-	-	G	ko:K14274	ko00040,map00040	ko00000,ko00001,ko01000	SMP-30/Gluconolaconase/LRE-like region
LNEOGEMI_02078	2.85e-89	yugU	-	-	S	-	-	-	Uncharacterised protein family UPF0047
LNEOGEMI_02079	5.94e-287	yhaA1	-	-	E	ko:K01436	-	ko00000,ko01000,ko01002	COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
LNEOGEMI_02080	7.58e-259	ytfP	-	-	S	ko:K07007	-	ko00000	HI0933-like protein
LNEOGEMI_02081	2.95e-48	-	-	-	-	-	-	-	-
LNEOGEMI_02082	9.19e-99	-	-	-	S	-	-	-	An automated process has identified a potential problem with this gene model
LNEOGEMI_02083	9.49e-169	-	-	-	S	-	-	-	Protein of unknown function (DUF3100)
LNEOGEMI_02084	1.72e-304	-	-	-	S	ko:K12941	-	ko00000,ko01002	amidohydrolase
LNEOGEMI_02085	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
LNEOGEMI_02086	2.07e-221	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
LNEOGEMI_02087	1.95e-244	yttB	-	-	EGP	-	-	-	Major facilitator superfamily
LNEOGEMI_02089	2.09e-131	ytqB	-	-	J	-	-	-	Putative rRNA methylase
LNEOGEMI_02090	9.47e-137	yvdA	4.2.1.1	-	P	ko:K01673	ko00910,map00910	ko00000,ko00001,ko01000	Reversible hydration of carbon dioxide
LNEOGEMI_02091	1.3e-194	ytpA	3.1.1.5	-	I	ko:K01048	ko00564,map00564	ko00000,ko00001,ko01000	Alpha beta hydrolase
LNEOGEMI_02092	3.24e-96	ytoA	-	-	S	-	-	-	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
LNEOGEMI_02093	2.35e-286	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
LNEOGEMI_02094	0.0	pckA	4.1.1.49	-	C	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
LNEOGEMI_02096	5.08e-192	ytmA	-	-	E	-	-	-	COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases
LNEOGEMI_02097	1.39e-230	ytlA	-	-	P	ko:K02051	-	ko00000,ko00002,ko02000	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components
LNEOGEMI_02098	6.58e-175	ytlC	3.6.3.36	-	P	ko:K02049,ko:K10831,ko:K15555	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
LNEOGEMI_02099	1.53e-175	ytlD	-	-	P	ko:K02050	-	ko00000,ko00002,ko02000	COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component
LNEOGEMI_02100	1.96e-108	ytkD	3.6.1.55	-	L	ko:K03574	-	ko00000,ko01000,ko03400	Belongs to the Nudix hydrolase family
LNEOGEMI_02101	1.58e-284	ymfD	-	-	EGP	ko:K08221	-	ko00000,ko02000	COG0477 Permeases of the major facilitator superfamily
LNEOGEMI_02102	5.16e-110	ywpF	-	-	S	-	-	-	YwpF-like protein
LNEOGEMI_02104	7.16e-280	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
LNEOGEMI_02105	1.2e-141	dgk	2.7.1.113	-	F	ko:K15518	ko00230,map00230	ko00000,ko00001,ko01000	Deoxyguanosine kinase
LNEOGEMI_02106	1.52e-154	dck	2.7.1.74, 2.7.1.76	-	F	ko:K15519	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko01000	Deoxycytidine kinase
LNEOGEMI_02107	2.62e-138	-	-	-	V	ko:K07448	-	ko00000,ko02048	Restriction endonuclease
LNEOGEMI_02108	5.59e-223	yclQ	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG4607 ABC-type enterochelin transport system, periplasmic component
LNEOGEMI_02109	1.19e-192	yclP	3.6.3.34	-	P	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
LNEOGEMI_02110	5.22e-197	yclO	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LNEOGEMI_02111	1.01e-206	yclN	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LNEOGEMI_02112	1.66e-128	pgpB3	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	COG0671 Membrane-associated phospholipid phosphatase
LNEOGEMI_02113	1.61e-296	tcyP	-	-	U	ko:K06956	-	ko00000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
LNEOGEMI_02114	1.49e-97	-	-	-	S	-	-	-	Putative small multi-drug export protein
LNEOGEMI_02115	1.4e-95	-	-	-	S	-	-	-	DinB superfamily
LNEOGEMI_02116	1.34e-76	-	-	-	S	-	-	-	Protein of unknown function (DUF1516)
LNEOGEMI_02117	1.42e-108	yneJ	-	-	O	-	-	-	COG4846 Membrane protein involved in cytochrome C biogenesis
LNEOGEMI_02118	3.16e-207	ctaB	2.5.1.141	-	O	ko:K02257	ko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714	ko00000,ko00001,ko00002,ko01000,ko01006,ko03029	Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group
LNEOGEMI_02119	1.71e-211	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	Inorganic pyrophosphatase
LNEOGEMI_02120	1.2e-48	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
LNEOGEMI_02121	1.35e-66	-	-	-	S	-	-	-	Transcriptional regulator
LNEOGEMI_02122	2.2e-34	-	-	-	-	-	-	-	-
LNEOGEMI_02123	2.12e-84	-	-	-	S	-	-	-	Phosphoribosyl-ATP pyrophosphohydrolase
LNEOGEMI_02127	2.03e-65	-	-	-	S	-	-	-	Protein of unknwon function (DUF3310)
LNEOGEMI_02129	2.57e-59	-	-	-	-	-	-	-	-
LNEOGEMI_02130	5.05e-121	-	-	-	L	-	-	-	ERCC4 domain
LNEOGEMI_02131	2.85e-48	-	-	-	-	-	-	-	-
LNEOGEMI_02132	6.05e-93	-	-	-	-	-	-	-	-
LNEOGEMI_02133	0.0	-	-	-	S	ko:K06919	-	ko00000	D5 N terminal like
LNEOGEMI_02134	2.67e-101	-	-	-	S	-	-	-	Protein of unknown function (DUF669)
LNEOGEMI_02135	6.72e-200	-	-	-	D	-	-	-	AAA domain
LNEOGEMI_02136	3.89e-94	-	-	-	S	-	-	-	Bacteriophage Mu Gam like protein
LNEOGEMI_02137	5.51e-28	-	-	-	-	-	-	-	-
LNEOGEMI_02139	1.87e-59	-	-	-	-	-	-	-	-
LNEOGEMI_02141	6.59e-36	-	-	-	-	-	-	-	-
LNEOGEMI_02142	5.88e-61	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
LNEOGEMI_02143	4.22e-109	-	-	-	E	-	-	-	Zn peptidase
LNEOGEMI_02146	1.64e-35	-	-	-	-	-	-	-	-
LNEOGEMI_02147	1.86e-75	yqiX	-	-	S	-	-	-	YolD-like protein
LNEOGEMI_02148	2.22e-174	ligB	6.5.1.1, 6.5.1.6, 6.5.1.7	-	L	ko:K01971,ko:K10747	ko03030,ko03410,ko03420,ko03430,ko03450,map03030,map03410,map03420,map03430,map03450	ko00000,ko00001,ko01000,ko03032,ko03400	ATP-dependent DNA ligase
LNEOGEMI_02151	3.46e-121	-	3.5.1.28	-	V	ko:K01447	-	ko00000,ko01000	N-acetylmuramoyl-L-alanine amidase
LNEOGEMI_02152	4.12e-74	-	-	-	S	-	-	-	Bacteriophage holin family
LNEOGEMI_02153	5.82e-294	-	-	-	L	-	-	-	Prophage endopeptidase tail
LNEOGEMI_02154	1.09e-09	-	-	-	S	-	-	-	RES
LNEOGEMI_02157	1.3e-187	-	-	-	S	-	-	-	Phage tail protein
LNEOGEMI_02158	0.0	-	-	-	D	-	-	-	phage tail tape measure protein
LNEOGEMI_02161	9.38e-81	-	-	-	N	-	-	-	phage major tail protein, phi13 family
LNEOGEMI_02162	1.3e-62	-	-	-	-	-	-	-	-
LNEOGEMI_02163	7.88e-15	-	-	-	S	-	-	-	TIGRFAM phage protein, HK97 gp10 family
LNEOGEMI_02164	8.33e-77	-	-	-	S	-	-	-	Phage head-tail joining protein
LNEOGEMI_02165	9.23e-55	-	-	-	S	-	-	-	Phage gp6-like head-tail connector protein
LNEOGEMI_02166	2.85e-78	-	-	-	N	-	-	-	Bacterial Ig-like domain 2
LNEOGEMI_02167	9.67e-291	-	-	-	S	-	-	-	capsid protein
LNEOGEMI_02168	1.34e-144	-	-	-	S	ko:K06904	-	ko00000	Caudovirus prohead serine protease
LNEOGEMI_02169	1.94e-315	-	-	-	S	-	-	-	Phage portal protein
LNEOGEMI_02170	5.59e-37	-	-	-	-	-	-	-	-
LNEOGEMI_02171	2.97e-309	-	-	-	S	-	-	-	Terminase
LNEOGEMI_02172	1.45e-49	-	-	-	L	-	-	-	phage terminase small subunit
LNEOGEMI_02173	1.45e-93	-	-	-	V	ko:K07451	-	ko00000,ko01000,ko02048	HNH endonuclease
LNEOGEMI_02175	2.03e-98	-	-	-	-	-	-	-	-
LNEOGEMI_02178	5.02e-130	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
LNEOGEMI_02180	1.26e-26	-	-	-	-	-	-	-	-
LNEOGEMI_02181	1.71e-91	yugN	-	-	S	-	-	-	YugN-like family
LNEOGEMI_02182	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
LNEOGEMI_02183	7.51e-262	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
LNEOGEMI_02184	1.16e-286	yugJ	-	-	C	ko:K19955	-	ko00000,ko01000	oxidoreductases, Fe-dependent alcohol dehydrogenase family
LNEOGEMI_02185	2.41e-45	yuzA	-	-	S	ko:K09779	-	ko00000	Domain of unknown function (DUF378)
LNEOGEMI_02186	7.86e-77	yugI	-	-	J	ko:K07570,ko:K07571	-	ko00000	RNA binding protein (contains ribosomal protein S1 domain)
LNEOGEMI_02187	8.68e-257	yfmL	-	-	L	-	-	-	COG0513 Superfamily II DNA and RNA helicases
LNEOGEMI_02188	6.03e-175	thiM	2.7.1.50	-	H	ko:K00878	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
LNEOGEMI_02189	6.4e-281	yugH	-	-	E	ko:K10907	-	ko00000,ko01000,ko01007	Aminotransferase
LNEOGEMI_02190	4.23e-110	alaR	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_02191	1.97e-85	yqfX	-	-	S	-	-	-	membrane
LNEOGEMI_02192	1e-138	yqfW	-	-	S	ko:K05967	-	ko00000	Belongs to the 5'(3')-deoxyribonucleotidase family
LNEOGEMI_02194	4.23e-49	-	-	-	S	-	-	-	Domain of Unknown Function (DUF1540)
LNEOGEMI_02195	1.06e-99	zur	-	-	P	ko:K02076,ko:K03711	-	ko00000,ko03000	Belongs to the Fur family
LNEOGEMI_02196	2.12e-179	zurM	-	-	P	ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1108 ABC-type Mn2 Zn2 transport systems, permease components
LNEOGEMI_02197	3.99e-183	zurA	-	-	P	ko:K02074,ko:K09817	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	'COG1121 ABC-type Mn Zn transport systems, ATPase component'
LNEOGEMI_02198	3.98e-169	-	-	-	M	-	-	-	Transglycosylase SLT domain
LNEOGEMI_02199	4.61e-273	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
LNEOGEMI_02201	4.38e-209	nfo	3.1.21.2	-	L	ko:K01151	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
LNEOGEMI_02202	5.47e-314	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
LNEOGEMI_02203	1.39e-91	yqfQ	-	-	S	-	-	-	YqfQ-like protein
LNEOGEMI_02204	1.93e-110	-	-	-	K	ko:K07736	-	ko00000,ko03000	Transcription factor
LNEOGEMI_02205	3.02e-227	ispH	1.17.7.4	-	IM	ko:K03527	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
LNEOGEMI_02206	1.48e-250	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LNEOGEMI_02207	3.74e-151	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
LNEOGEMI_02208	6.91e-84	cccA	-	-	C	ko:K13300	-	ko00000	COG2010 Cytochrome c, mono- and diheme variants
LNEOGEMI_02209	1.45e-257	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
LNEOGEMI_02210	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
LNEOGEMI_02211	3.16e-102	yqxD	-	-	S	ko:K09768	-	ko00000	Belongs to the UPF0178 family
LNEOGEMI_02212	1.01e-183	yqfL	2.7.11.33, 2.7.4.28	-	S	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
LNEOGEMI_02213	5.23e-144	ccpN	-	-	K	-	-	-	CBS domain
LNEOGEMI_02214	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
LNEOGEMI_02215	4.79e-219	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
LNEOGEMI_02217	1.88e-176	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
LNEOGEMI_02218	2.53e-25	-	-	-	S	-	-	-	YqzL-like protein
LNEOGEMI_02219	5.78e-215	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LNEOGEMI_02220	9.11e-92	cdd	3.5.4.5	-	F	ko:K01489	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
LNEOGEMI_02221	1.82e-80	dgkA	2.7.1.107, 2.7.1.66	-	M	ko:K00887,ko:K00901	ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231	ko00000,ko00001,ko01000	Diacylglycerol kinase
LNEOGEMI_02222	1.88e-106	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
LNEOGEMI_02223	0.0	yqfF	-	-	S	ko:K07037	-	ko00000	membrane-associated HD superfamily hydrolase
LNEOGEMI_02224	2.65e-220	phoH	-	-	T	ko:K06217	-	ko00000	Phosphate starvation-inducible protein PhoH
LNEOGEMI_02225	7.45e-278	yqfD	-	-	S	ko:K06438	-	ko00000	Stage IV sporulation
LNEOGEMI_02226	1e-62	yqfC	-	-	S	-	-	-	sporulation protein YqfC
LNEOGEMI_02227	7.2e-68	-	-	-	-	-	-	-	-
LNEOGEMI_02228	1.34e-153	yqfA	-	-	S	-	-	-	UPF0365 protein
LNEOGEMI_02229	8.29e-282	yqeZ	-	-	O	ko:K07403	-	ko00000	COG1030 Membrane-bound serine protease (ClpP class)
LNEOGEMI_02230	3.16e-92	yqeY	-	-	S	ko:K09117	-	ko00000	Yqey-like protein
LNEOGEMI_02231	1.03e-26	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
LNEOGEMI_02232	1.39e-204	yqeW	-	-	P	ko:K03324	-	ko00000,ko02000	COG1283 Na phosphate symporter
LNEOGEMI_02233	3.1e-218	iolS	-	-	C	ko:K06607	-	ko00000,ko01000	Aldo keto reductase
LNEOGEMI_02234	7.06e-147	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
LNEOGEMI_02235	7.22e-282	gltT	-	-	C	-	-	-	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
LNEOGEMI_02236	1.48e-172	-	-	-	Q	-	-	-	ubiE/COQ5 methyltransferase family
LNEOGEMI_02237	0.0	yqeV	2.8.4.5	-	J	ko:K18707	-	ko00000,ko01000,ko03016	ribosomal protein S12 methylthiotransferase
LNEOGEMI_02238	2.47e-168	rsmE	2.1.1.193	-	J	ko:K09761	-	ko00000,ko01000,ko03009	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
LNEOGEMI_02239	1.86e-217	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Methylates ribosomal protein L11
LNEOGEMI_02240	3.2e-265	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
LNEOGEMI_02241	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
LNEOGEMI_02242	2.88e-110	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LNEOGEMI_02243	4.19e-239	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
LNEOGEMI_02244	7.46e-279	hemN	-	-	H	-	-	-	Involved in the biosynthesis of porphyrin-containing compound
LNEOGEMI_02245	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
LNEOGEMI_02246	2.43e-67	-	-	-	-	-	-	-	-
LNEOGEMI_02247	2.07e-262	spoIIP	-	-	M	ko:K06385	-	ko00000	stage II sporulation protein P
LNEOGEMI_02248	2.82e-259	gpr	3.4.24.78	-	C	ko:K06012	-	ko00000,ko01000,ko01002	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
LNEOGEMI_02249	1.15e-48	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
LNEOGEMI_02250	6.51e-226	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
LNEOGEMI_02251	9.62e-09	-	-	-	S	-	-	-	YqzM-like protein
LNEOGEMI_02252	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
LNEOGEMI_02253	9.98e-140	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	ComE operon protein 2
LNEOGEMI_02254	3.02e-129	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	COG1555 DNA uptake protein and related DNA-binding proteins
LNEOGEMI_02255	3.39e-189	comER	-	-	E	ko:K02239	-	ko00000,ko00002,ko02044	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LNEOGEMI_02256	2.3e-172	-	-	-	S	-	-	-	Methyltransferase domain
LNEOGEMI_02257	8.76e-201	yitL	-	-	S	ko:K00243	-	ko00000	protein conserved in bacteria
LNEOGEMI_02258	7.46e-81	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
LNEOGEMI_02259	8.22e-138	yqeK	-	-	H	-	-	-	HD superfamily hydrolase involved in NAD metabolism
LNEOGEMI_02260	1.66e-136	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
LNEOGEMI_02261	2.17e-62	yhbY	-	-	J	ko:K07574	-	ko00000,ko03009	RNA-binding protein containing KH domain, possibly ribosomal protein
LNEOGEMI_02262	3.05e-196	aroE	1.1.1.25	-	E	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
LNEOGEMI_02263	1.68e-276	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	In Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
LNEOGEMI_02264	1.52e-125	yqeG	-	-	S	ko:K07015	-	ko00000	hydrolase of the HAD superfamily
LNEOGEMI_02266	0.0	mrpA	-	-	CP	ko:K05565	-	ko00000,ko02000	COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit
LNEOGEMI_02267	4.26e-93	mrpB	-	-	P	ko:K05566	-	ko00000,ko02000	Subunit B of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
LNEOGEMI_02268	1.13e-66	mnhC	-	-	P	ko:K05567	-	ko00000,ko02000	Subunit C of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
LNEOGEMI_02269	0.0	mrpD	-	-	CP	ko:K05568	-	ko00000,ko02000	Subunit D of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
LNEOGEMI_02270	8.91e-106	mrpE	-	-	P	ko:K05569	-	ko00000,ko02000	Subunit E of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
LNEOGEMI_02271	4.41e-52	-	-	-	P	ko:K05570	-	ko00000,ko02000	Multiple resistance and pH regulation protein F (MrpF / PhaF)
LNEOGEMI_02272	1.13e-81	-	-	-	P	ko:K05571	-	ko00000,ko02000	Na+/H+ antiporter subunit
LNEOGEMI_02273	5.78e-57	hbs	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
LNEOGEMI_02274	2.4e-191	thiD	2.5.1.3, 2.7.1.49, 2.7.4.7	-	H	ko:K00941,ko:K14153	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
LNEOGEMI_02276	0.0	-	-	-	M	ko:K05020	-	ko00000,ko02000	Belongs to the BCCT transporter (TC 2.A.15) family
LNEOGEMI_02277	1.84e-281	nasA	-	-	P	ko:K02575	ko00910,map00910	ko00000,ko00001,ko00002,ko02000	COG2223 Nitrate nitrite transporter
LNEOGEMI_02278	0.0	nasC	-	-	C	ko:K00372	ko00910,ko01120,map00910,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
LNEOGEMI_02279	0.0	nirB	1.7.1.15	-	C	ko:K00362	ko00910,ko01120,map00910,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LNEOGEMI_02280	5.08e-72	nirD	1.7.1.15	-	P	ko:K00363	ko00910,ko01120,map00910,map01120	ko00000,ko00001,ko00002,ko01000	Nitrite reductase
LNEOGEMI_02281	0.0	nasD	1.7.1.15	-	C	ko:K00362	ko00910,ko01120,map00910,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LNEOGEMI_02282	1.35e-300	nasF	2.1.1.107, 4.2.1.75	-	H	ko:K13542	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the precorrin methyltransferase family
LNEOGEMI_02283	1.91e-69	-	-	-	-	-	-	-	-
LNEOGEMI_02285	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
LNEOGEMI_02286	5.32e-242	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LNEOGEMI_02287	4.18e-118	folK	2.7.6.3	-	H	ko:K00950	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LNEOGEMI_02288	4.26e-80	folB	1.13.11.81, 4.1.2.25, 5.1.99.8	-	H	ko:K01633	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LNEOGEMI_02289	1.68e-188	folP	2.5.1.15	-	H	ko:K00796	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
LNEOGEMI_02290	1.82e-190	pabC	4.1.3.38	-	EH	ko:K02619	ko00790,map00790	ko00000,ko00001,ko01000	4-amino-4-deoxychorismate lyase
LNEOGEMI_02291	3.61e-138	pabA	2.6.1.85	-	EH	ko:K01664	ko00790,map00790	ko00000,ko00001,ko01000	Anthranilate synthase
LNEOGEMI_02292	0.0	pabB	2.6.1.85	-	EH	ko:K01665	ko00790,map00790	ko00000,ko00001,ko01000	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LNEOGEMI_02293	2.28e-221	cysK	2.5.1.47	-	E	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
LNEOGEMI_02294	1.63e-201	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
LNEOGEMI_02295	3.69e-183	coaX	2.7.1.33	-	F	ko:K03525	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
LNEOGEMI_02296	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LNEOGEMI_02297	9.01e-121	hpt	2.4.2.8, 6.3.4.19	-	F	ko:K00760,ko:K15780	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Belongs to the purine pyrimidine phosphoribosyltransferase family
LNEOGEMI_02298	0.0	tilS	2.4.2.8, 6.3.4.19	-	D	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
LNEOGEMI_02299	1.11e-221	yabT	2.7.11.1	-	KLT	ko:K08884	-	ko00000,ko01000,ko01001	serine threonine protein kinase
LNEOGEMI_02300	2.19e-165	yabS	-	-	S	ko:K07114	-	ko00000,ko02000	protein containing a von Willebrand factor type A (vWA) domain
LNEOGEMI_02301	0.0	spoIIE	3.1.3.16	-	KT	ko:K06382	-	ko00000,ko01000	stage II sporulation protein E
LNEOGEMI_02302	3.42e-283	citM	-	-	C	ko:K03300	-	ko00000	Citrate transporter
LNEOGEMI_02304	8.65e-92	yabR	-	-	J	ko:K07571	-	ko00000	RNA binding protein (contains ribosomal protein S1 domain)
LNEOGEMI_02305	2.87e-79	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
LNEOGEMI_02306	4.43e-93	yabQ	-	-	S	-	-	-	spore cortex biosynthesis protein
LNEOGEMI_02307	6.51e-69	yabP	-	-	S	-	-	-	Sporulation protein YabP
LNEOGEMI_02308	3.17e-131	-	-	-	S	-	-	-	SNARE associated Golgi protein
LNEOGEMI_02309	8.86e-250	ycgT	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
LNEOGEMI_02310	1.47e-110	-	2.3.1.128	-	K	ko:K03790	-	ko00000,ko01000,ko03009	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
LNEOGEMI_02311	4.78e-223	yvcT	1.1.1.215, 1.1.1.26, 1.1.1.79, 1.1.1.81	-	CH	ko:K00015,ko:K00090	ko00030,ko00260,ko00620,ko00630,ko01100,ko01110,ko01120,map00030,map00260,map00620,map00630,map01100,map01110,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LNEOGEMI_02312	8.17e-114	-	-	-	-	-	-	-	-
LNEOGEMI_02313	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
LNEOGEMI_02314	1.56e-252	pamO	-	-	P	ko:K07222	-	ko00000	Flavin-binding monooxygenase-like
LNEOGEMI_02315	0.0	scrA5	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
LNEOGEMI_02316	0.0	bglC1	3.2.1.21, 3.2.1.52	GH3	G	ko:K01207,ko:K05349	ko00460,ko00500,ko00520,ko00531,ko00940,ko01100,ko01110,ko01501,map00460,map00500,map00520,map00531,map00940,map01100,map01110,map01501	ko00000,ko00001,ko00002,ko01000	Belongs to the glycosyl hydrolase 3 family
LNEOGEMI_02317	0.0	sacA	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
LNEOGEMI_02318	4.85e-193	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
LNEOGEMI_02319	1.79e-117	-	-	-	S	-	-	-	MepB protein
LNEOGEMI_02320	1.52e-212	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
LNEOGEMI_02321	3.08e-164	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
LNEOGEMI_02322	1.81e-80	yhcF	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator
LNEOGEMI_02323	2.98e-152	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
LNEOGEMI_02324	7.25e-145	-	-	-	-	-	-	-	-
LNEOGEMI_02325	4.42e-249	yhfE	-	-	G	-	-	-	peptidase M42
LNEOGEMI_02326	5.28e-105	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
LNEOGEMI_02327	2.47e-125	yhzB	-	-	S	-	-	-	B3/4 domain
LNEOGEMI_02328	4.83e-277	queG	1.17.99.6	-	C	ko:K18979	-	ko00000,ko01000,ko03016	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LNEOGEMI_02329	2.23e-119	ogt	2.1.1.63	-	L	ko:K00567	-	ko00000,ko01000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LNEOGEMI_02330	6.92e-101	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
LNEOGEMI_02331	9.22e-213	yhbB	-	-	S	-	-	-	Putative amidase domain
LNEOGEMI_02332	7.16e-114	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
LNEOGEMI_02333	2.08e-113	yufK	-	-	S	-	-	-	Family of unknown function (DUF5366)
LNEOGEMI_02334	2.27e-69	-	1.14.99.48	-	S	ko:K07145	ko00860,ko01110,map00860,map01110	ko00000,ko00001,ko01000	Antibiotic biosynthesis monooxygenase
LNEOGEMI_02335	0.0	pbpD	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555,ko:K18770	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	Penicillin-binding Protein
LNEOGEMI_02336	0.0	prkA	-	-	T	ko:K07180	-	ko00000	Ser protein kinase
LNEOGEMI_02337	5.21e-111	spsB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
LNEOGEMI_02338	4.26e-131	spsB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
LNEOGEMI_02339	4.66e-177	cysA1	-	-	S	-	-	-	AAA domain
LNEOGEMI_02340	4.51e-281	yhbH	-	-	S	ko:K09786	-	ko00000	Belongs to the UPF0229 family
LNEOGEMI_02343	1.05e-189	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
LNEOGEMI_02344	0.0	-	-	-	EGP	-	-	-	the major facilitator superfamily
LNEOGEMI_02345	6.26e-222	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	COG1131 ABC-type multidrug transport system, ATPase component
LNEOGEMI_02346	6.07e-189	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	Transport permease protein
LNEOGEMI_02348	2.91e-104	-	-	-	S	-	-	-	Protein of unknown function (DUF664)
LNEOGEMI_02349	0.0	-	-	-	G	ko:K10297	-	ko00000,ko04121	Right handed beta helix region
LNEOGEMI_02350	3.19e-205	ydaD	-	-	IQ	-	-	-	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
LNEOGEMI_02351	0.0	-	-	-	E	ko:K03307	-	ko00000	Sodium:solute symporter family
LNEOGEMI_02352	7.41e-163	-	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
LNEOGEMI_02353	0.0	argH	4.3.2.1	-	E	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	argininosuccinate lyase
LNEOGEMI_02355	3.27e-169	yvoA	-	-	K	ko:K03710	-	ko00000,ko03000	transcriptional
LNEOGEMI_02356	1.91e-280	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LNEOGEMI_02357	1.44e-171	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
LNEOGEMI_02358	2.48e-164	-	1.5.1.39	-	C	ko:K10678,ko:K19286	ko00633,ko00740,ko01100,ko01120,map00633,map00740,map01100,map01120	ko00000,ko00001,ko01000	Oxidoreductase
LNEOGEMI_02359	2.3e-278	mtnE	-	-	E	ko:K08969	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
LNEOGEMI_02360	8.39e-144	-	-	-	Q	-	-	-	Fumarylacetoacetate (FAA) hydrolase family
LNEOGEMI_02361	8.67e-171	yqiK	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
LNEOGEMI_02362	0.0	tagE6	2.4.1.52	GT4	M	ko:K00712	-	ko00000,ko01000,ko01003	Glycosyl transferases group 1
LNEOGEMI_02363	0.0	yhcX	-	-	K	-	-	-	Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
LNEOGEMI_02364	1.61e-156	sfsA	-	-	S	ko:K06206	-	ko00000	Sugar fermentation stimulation protein
LNEOGEMI_02365	0.0	-	1.1.5.3	-	C	ko:K00111	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	C-terminal domain of alpha-glycerophosphate oxidase
LNEOGEMI_02366	0.0	pgcA	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase
LNEOGEMI_02367	0.0	spoVR	-	-	S	ko:K06415	-	ko00000	Stage V sporulation protein R
LNEOGEMI_02368	0.0	yknU	-	-	V	ko:K06147,ko:K11085	ko02010,map02010	ko00000,ko00001,ko01000,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
LNEOGEMI_02369	0.0	yknV	-	-	V	ko:K02021,ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
LNEOGEMI_02370	1.01e-292	avtA	-	-	EK	ko:K05825	ko00300,ko01100,ko01130,ko01210,map00300,map01100,map01130,map01210	ko00000,ko00001,ko01000	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
LNEOGEMI_02371	4.1e-193	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Peptidase family M48
LNEOGEMI_02372	3.52e-124	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
LNEOGEMI_02373	1.97e-275	yngJ	1.3.8.1	-	I	ko:K00248	ko00071,ko00280,ko00650,ko01100,ko01110,ko01120,ko01200,ko01212,map00071,map00280,map00650,map01100,map01110,map01120,map01200,map01212	ko00000,ko00001,ko01000	acyl-CoA dehydrogenase
LNEOGEMI_02374	0.0	yngH	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Biotin carboxylase
LNEOGEMI_02375	3.93e-41	-	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	Biotin carboxyl carrier protein
LNEOGEMI_02376	1.59e-171	yngF	-	-	I	-	-	-	Belongs to the enoyl-CoA hydratase isomerase family
LNEOGEMI_02377	0.0	yngE	-	-	I	-	-	-	COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
LNEOGEMI_02379	2.79e-274	-	-	-	-	-	-	-	-
LNEOGEMI_02380	8.53e-102	-	-	-	K	ko:K03088	-	ko00000,ko03021	Sigma-70, region 4
LNEOGEMI_02381	8.44e-262	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
LNEOGEMI_02382	1.11e-204	lrp	-	-	QT	-	-	-	PucR C-terminal helix-turn-helix domain
LNEOGEMI_02383	2.94e-31	-	-	-	-	-	-	-	-
LNEOGEMI_02385	1.77e-261	yheB	-	-	S	-	-	-	Belongs to the UPF0754 family
LNEOGEMI_02386	2.8e-72	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
LNEOGEMI_02387	1.32e-223	yhaX	-	-	S	-	-	-	hydrolases of the HAD superfamily
LNEOGEMI_02389	2.44e-65	-	-	-	-	-	-	-	-
LNEOGEMI_02390	2.7e-159	cssR	-	-	T	ko:K07770	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LNEOGEMI_02391	0.0	cssS	2.7.13.3	-	T	ko:K07650	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
LNEOGEMI_02392	4.85e-231	yhaM	-	-	L	ko:K03698	-	ko00000,ko01000,ko03019	Shows a 3'-5' exoribonuclease activity
LNEOGEMI_02393	1.14e-57	yhaL	-	-	S	-	-	-	Sporulation protein YhaL
LNEOGEMI_02394	2.97e-211	prsA	5.2.1.8	-	M	ko:K01802,ko:K07533	-	ko00000,ko01000,ko03110	plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
LNEOGEMI_02395	1.23e-06	-	-	-	S	-	-	-	Protein of unknown function (Tiny_TM_bacill)
LNEOGEMI_02396	7.14e-133	-	-	-	S	-	-	-	Protein conserved in bacteria
LNEOGEMI_02397	1.67e-140	hpr	-	-	K	ko:K09682	-	ko00000,ko03000	Negative regulator of protease production and sporulation
LNEOGEMI_02398	1.01e-65	yhaH	-	-	D	-	-	-	gas vesicle protein
LNEOGEMI_02399	1.58e-261	serC	2.6.1.52	-	E	ko:K00831	ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
LNEOGEMI_02400	1.5e-96	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
LNEOGEMI_02401	8.06e-177	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	transporter (ATP-binding protein)
LNEOGEMI_02402	2.61e-280	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
LNEOGEMI_02403	1.23e-162	ecsC	-	-	S	-	-	-	EcsC protein family
LNEOGEMI_02404	1.85e-155	ccdA	-	-	O	ko:K06196	-	ko00000,ko02000	cytochrome c biogenesis protein
LNEOGEMI_02405	0.0	pbpF	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
LNEOGEMI_02406	2.21e-254	hemE	4.1.1.37	-	H	ko:K01599	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
LNEOGEMI_02407	1.9e-229	hemH	4.99.1.1, 4.99.1.9	-	H	ko:K01772	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the ferrous insertion into protoporphyrin IX
LNEOGEMI_02408	0.0	hemY	1.3.3.15, 1.3.3.4	-	H	ko:K00231	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
LNEOGEMI_02410	1.75e-129	spo0B	-	-	T	ko:K06375	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko01000	Sporulation initiation phospho-transferase B, C-terminal
LNEOGEMI_02411	5.62e-292	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
LNEOGEMI_02412	3.91e-95	pheB	5.4.99.5	-	S	ko:K06209	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the UPF0735 family
LNEOGEMI_02413	3.72e-205	pheA	4.2.1.51	-	E	ko:K04518	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Prephenate dehydratase
LNEOGEMI_02414	9.2e-114	yrxA	-	-	S	ko:K07105	-	ko00000	small molecule binding protein (contains 3H domain)
LNEOGEMI_02415	8.13e-263	nifS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Cysteine desulfurase
LNEOGEMI_02416	0.0	nadB	1.4.3.16	-	H	ko:K00278	ko00250,ko00760,ko01100,map00250,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of L-aspartate to iminoaspartate
LNEOGEMI_02417	2.01e-184	nadC	2.4.2.19	-	H	ko:K00767	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NadC ModD family
LNEOGEMI_02418	3.87e-262	nadA	2.5.1.72	-	H	ko:K03517	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
LNEOGEMI_02419	3.38e-73	safA	-	-	M	ko:K06370	-	ko00000	spore coat assembly protein SafA
LNEOGEMI_02420	5.01e-81	safA	-	-	M	ko:K06370	-	ko00000	spore coat assembly protein SafA
LNEOGEMI_02421	4.74e-25	-	-	-	S	-	-	-	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
LNEOGEMI_02422	5.31e-82	-	1.9.3.1	-	C	ko:K02275	ko00190,ko01100,map00190,map01100	ko00000,ko00001,ko00002,ko01000	cytochrome c oxidase subunit II
LNEOGEMI_02423	2.61e-112	bofC	-	-	S	ko:K06318	-	ko00000	BofC C-terminal domain
LNEOGEMI_02424	1.58e-133	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
LNEOGEMI_02425	2.6e-233	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
LNEOGEMI_02426	1.03e-37	yrzS	-	-	S	-	-	-	Protein of unknown function (DUF2905)
LNEOGEMI_02427	5.1e-240	queA	2.4.99.17	-	J	ko:K07568	-	ko00000,ko01000,ko03016	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
LNEOGEMI_02428	1.07e-289	tgt	2.4.2.29	-	F	ko:K00773	-	ko00000,ko01000,ko03016	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
LNEOGEMI_02429	1.58e-50	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase subunit YajC
LNEOGEMI_02430	7.78e-76	yrzE	-	-	S	-	-	-	Protein of unknown function (DUF3792)
LNEOGEMI_02431	3.82e-94	-	-	-	S	-	-	-	membrane
LNEOGEMI_02432	2.7e-39	yodI	-	-	-	-	-	-	-
LNEOGEMI_02433	0.0	spoVB	-	-	S	ko:K06409	-	ko00000,ko02000	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
LNEOGEMI_02434	9.5e-30	yrzD	-	-	S	-	-	-	Post-transcriptional regulator
LNEOGEMI_02435	1.5e-294	secD	-	-	U	ko:K03072,ko:K12257	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LNEOGEMI_02436	1.1e-191	secF	-	-	U	ko:K03074,ko:K12257	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LNEOGEMI_02437	5.69e-50	yrvD	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
LNEOGEMI_02438	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
LNEOGEMI_02439	1.64e-119	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LNEOGEMI_02440	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LNEOGEMI_02441	1.26e-95	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
LNEOGEMI_02442	5.25e-234	-	-	-	K	-	-	-	LacI family transcriptional regulator
LNEOGEMI_02443	1.52e-183	thuA	-	-	G	-	-	-	Trehalose utilisation
LNEOGEMI_02444	1.94e-246	-	-	-	S	-	-	-	Oxidoreductase family, C-terminal alpha/beta domain
LNEOGEMI_02445	1.35e-255	ybbE	3.4.16.4	-	V	ko:K21469	ko00550,map00550	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the UPF0214 family
LNEOGEMI_02447	6.5e-306	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
LNEOGEMI_02448	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
LNEOGEMI_02449	1.5e-273	-	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
LNEOGEMI_02450	5.89e-66	-	-	-	-	-	-	-	-
LNEOGEMI_02451	2.77e-273	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Methionine synthase
LNEOGEMI_02452	2.48e-176	yrvM	-	-	H	ko:K22132	-	ko00000,ko03016	COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
LNEOGEMI_02453	7.73e-139	rsfA	-	-	S	ko:K06314	-	ko00000,ko03000	Transcriptional regulator
LNEOGEMI_02454	2.58e-293	rarA	-	-	L	ko:K07478	-	ko00000	COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase
LNEOGEMI_02455	8.4e-93	cymR	-	-	K	ko:K17472	-	ko00000,ko03000	Transcriptional regulator
LNEOGEMI_02456	4.23e-268	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Cysteine desulfurase
LNEOGEMI_02457	1.05e-275	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
LNEOGEMI_02458	5.69e-81	yrrB	-	-	S	-	-	-	COG0457 FOG TPR repeat
LNEOGEMI_02459	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
LNEOGEMI_02460	1.14e-105	yrrD	-	-	S	-	-	-	protein conserved in bacteria
LNEOGEMI_02461	1.11e-41	yrzR	-	-	-	-	-	-	-
LNEOGEMI_02462	1.55e-233	yrrI	-	-	S	-	-	-	AI-2E family transporter
LNEOGEMI_02463	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LNEOGEMI_02464	1.32e-57	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
LNEOGEMI_02465	1.28e-93	yrrK	-	-	L	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LNEOGEMI_02466	2.04e-43	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
LNEOGEMI_02467	2.01e-267	mltG	-	-	S	ko:K07082	-	ko00000	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LNEOGEMI_02468	3.15e-146	yrrM	2.1.1.104	-	S	ko:K00588	ko00360,ko00940,ko00941,ko00945,ko01100,ko01110,map00360,map00940,map00941,map00945,map01100,map01110	ko00000,ko00001,ko00002,ko01000	O-methyltransferase
LNEOGEMI_02469	4.67e-147	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Cytidine monophosphokinase
LNEOGEMI_02470	2.58e-103	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
LNEOGEMI_02471	6.64e-17	yrrS	-	-	S	-	-	-	Protein of unknown function (DUF1510)
LNEOGEMI_02472	0.0	ligD	6.5.1.1	-	L	ko:K01971	ko03450,map03450	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA ligase
LNEOGEMI_02473	2.91e-191	ku	-	-	L	ko:K10979	ko03450,map03450	ko00000,ko00001,ko03400	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
LNEOGEMI_02474	2.39e-158	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LNEOGEMI_02476	1.03e-100	-	-	-	-	-	-	-	-
LNEOGEMI_02477	0.0	-	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding proteins, family 5 Middle
LNEOGEMI_02478	4.62e-187	-	-	-	P	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
LNEOGEMI_02479	1.43e-181	-	-	-	P	ko:K02031	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Oligopeptide/dipeptide transporter, C-terminal region
LNEOGEMI_02480	3.7e-204	-	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	N-terminal TM domain of oligopeptide transport permease C
LNEOGEMI_02481	9.56e-194	-	-	-	P	ko:K02033	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_02482	9.47e-137	arpR	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
LNEOGEMI_02483	0.0	-	3.2.1.1	GH13	G	ko:K01176	ko00500,ko01100,ko04973,map00500,map01100,map04973	ko00000,ko00001,ko01000	Starch/carbohydrate-binding module (family 53)
LNEOGEMI_02484	5.94e-70	-	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LNEOGEMI_02485	4.16e-134	XK27_06885	-	-	L	-	-	-	COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes
LNEOGEMI_02486	1.84e-236	lplJ	6.3.1.20	-	H	ko:K03800	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Lipoate-protein ligase
LNEOGEMI_02487	0.0	-	-	-	S	-	-	-	Membrane
LNEOGEMI_02488	5.49e-282	hipO3	-	-	S	ko:K12941,ko:K21613	-	ko00000,ko01000,ko01002	amidohydrolase
LNEOGEMI_02489	9.38e-209	ybaS	-	-	S	-	-	-	Na -dependent transporter
LNEOGEMI_02490	1.27e-159	sigK	-	-	K	ko:K03091	-	ko00000,ko03021	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LNEOGEMI_02491	2.85e-222	-	-	-	P	-	-	-	Transporter associated domain
LNEOGEMI_02492	2.24e-34	-	-	-	-	-	-	-	-
LNEOGEMI_02494	0.0	yfiB3	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
LNEOGEMI_02495	0.0	yfiC3	-	-	V	ko:K06147	-	ko00000,ko02000	COG1132 ABC-type multidrug transport system, ATPase and permease components
LNEOGEMI_02496	4.3e-294	kinB3	2.7.13.3	-	T	ko:K07697	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
LNEOGEMI_02497	0.0	glpK	2.7.1.30	-	C	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
LNEOGEMI_02498	0.0	glpD	1.1.5.3	-	C	ko:K00111	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
LNEOGEMI_02499	2.39e-121	glpP	-	-	K	ko:K02443	-	ko00000,ko03000	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
LNEOGEMI_02500	1.87e-305	alsT	-	-	E	ko:K03310	-	ko00000	Sodium alanine symporter
LNEOGEMI_02501	6.38e-297	ykvU	-	-	S	-	-	-	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
LNEOGEMI_02502	0.0	yngK	-	-	T	-	-	-	Glycosyl hydrolase-like 10
LNEOGEMI_02503	0.0	ggt	2.3.2.2, 3.4.19.13	-	E	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	ko00000,ko00001,ko01000,ko01002	gamma-glutamyltransferase
LNEOGEMI_02504	0.0	treP	2.7.1.201	-	G	ko:K02818,ko:K02819	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
LNEOGEMI_02505	0.0	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	COG0366 Glycosidases
LNEOGEMI_02506	4.08e-157	treR	-	-	K	ko:K03486	-	ko00000,ko03000	transcriptional
LNEOGEMI_02507	3.12e-110	bsaA	1.11.1.9	-	O	ko:K00432	ko00480,ko00590,ko04918,map00480,map00590,map04918	ko00000,ko00001,ko01000	Belongs to the glutathione peroxidase family
LNEOGEMI_02508	5.93e-261	nos	1.14.14.47	-	C	ko:K00491	ko00220,ko00330,ko01100,ko01110,map00220,map00330,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
LNEOGEMI_02509	0.0	yfmR	-	-	S	ko:K15738	-	ko00000,ko02000	COG0488 ATPase components of ABC transporters with duplicated ATPase domains
LNEOGEMI_02510	4.76e-169	fruR	-	-	K	ko:K03436	-	ko00000,ko03000	Transcriptional regulator
LNEOGEMI_02511	1.84e-208	pfkB	2.7.1.56	-	G	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family
LNEOGEMI_02512	0.0	fruA	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type)
LNEOGEMI_02513	2.05e-231	mreBH	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Rod-share determining protein MreBH
LNEOGEMI_02514	3.46e-302	yhdH	-	-	S	ko:K03308	-	ko00000	Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
LNEOGEMI_02515	2.07e-75	-	-	-	-	-	-	-	-
LNEOGEMI_02516	5.13e-61	-	-	-	K	-	-	-	SpoVT / AbrB like domain
LNEOGEMI_02517	1.81e-54	-	-	-	-	-	-	-	-
LNEOGEMI_02518	5.77e-145	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Caulimovirus viroplasmin
LNEOGEMI_02519	2.13e-311	ywdH	1.2.1.3	-	C	ko:K00128	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
LNEOGEMI_02520	1.55e-308	-	1.14.13.59	-	Q	ko:K03897	ko00310,ko01120,map00310,map01120	ko00000,ko00001,ko01000	L-lysine 6-monooxygenase (NADPH-requiring)
LNEOGEMI_02523	0.0	kat	1.11.1.6	-	P	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	ko00000,ko00001,ko00002,ko01000	serves to protect cells from the toxic effects of hydrogen peroxide
LNEOGEMI_02524	0.0	pepF2	-	-	E	-	-	-	COG1164 Oligoendopeptidase F
LNEOGEMI_02525	1.14e-166	-	-	-	-	-	-	-	-
LNEOGEMI_02526	9.49e-240	ythB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	COG1294 Cytochrome bd-type quinol oxidase, subunit 2
LNEOGEMI_02527	4.16e-314	ythA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	oxidase, subunit
LNEOGEMI_02528	1.21e-29	-	-	-	S	-	-	-	Fur-regulated basic protein B
LNEOGEMI_02531	1.97e-188	yfkD	-	-	S	-	-	-	YfkD-like protein
LNEOGEMI_02532	3.26e-277	yfkA	-	-	S	-	-	-	YfkB-like domain
LNEOGEMI_02533	1.76e-147	-	-	-	G	ko:K15640	-	ko00000	Belongs to the phosphoglycerate mutase family
LNEOGEMI_02534	1.57e-314	-	-	-	S	-	-	-	COG1253 Hemolysins and related proteins containing CBS domains
LNEOGEMI_02535	3.22e-181	-	-	-	S	ko:K08974	-	ko00000	Domain of unknown function (DUF368)
LNEOGEMI_02536	1.51e-188	pdaA	-	-	G	ko:K01567	-	ko00000,ko01000	deacetylase
LNEOGEMI_02538	0.0	thiC	4.1.99.17	-	H	ko:K03147	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
LNEOGEMI_02539	8.49e-210	-	-	-	O	-	-	-	Pyridine nucleotide-disulphide oxidoreductase
LNEOGEMI_02540	1.19e-92	-	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_02541	1.14e-107	-	-	-	G	-	-	-	Xylose isomerase-like TIM barrel
LNEOGEMI_02542	4.2e-146	surE	3.1.3.5	-	S	ko:K03787	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Survival protein SurE
LNEOGEMI_02543	3.78e-175	-	-	-	P	ko:K02012	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
LNEOGEMI_02544	2.82e-236	-	-	-	P	ko:K02011	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_02545	3.7e-172	-	3.6.3.30	-	P	ko:K02010,ko:K02052	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
LNEOGEMI_02546	2.29e-81	-	-	-	-	-	-	-	-
LNEOGEMI_02547	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LNEOGEMI_02548	1.41e-243	mccF	-	-	V	-	-	-	LD-carboxypeptidase
LNEOGEMI_02549	1.36e-65	-	-	-	-	-	-	-	-
LNEOGEMI_02550	6.23e-213	yfhF	-	-	S	ko:K07071	-	ko00000	nucleoside-diphosphate sugar epimerase
LNEOGEMI_02551	1.03e-177	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Modulates RecA activity
LNEOGEMI_02552	8.82e-68	yfhH	-	-	S	-	-	-	Protein of unknown function (DUF1811)
LNEOGEMI_02553	9.25e-30	-	-	-	S	-	-	-	YpzG-like protein
LNEOGEMI_02554	2.33e-237	yfhP	-	-	S	ko:K07038	-	ko00000	membrane-bound metal-dependent
LNEOGEMI_02555	5.47e-257	mutY	-	-	L	ko:K03575	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	A G-specific
LNEOGEMI_02556	2.34e-162	-	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
LNEOGEMI_02557	2.23e-77	-	-	-	-	-	-	-	-
LNEOGEMI_02558	5.62e-27	yfhS	-	-	-	-	-	-	-
LNEOGEMI_02559	9.29e-169	fabL	1.3.1.104	-	IQ	ko:K10780	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
LNEOGEMI_02560	1.43e-21	-	-	-	S	ko:K06422	-	ko00000	Small, acid-soluble spore protein, gamma-type
LNEOGEMI_02561	2.94e-133	ygaC	-	-	J	ko:K07586	-	ko00000	Belongs to the UPF0374 family
LNEOGEMI_02562	0.0	ygaD	-	-	V	ko:K11085	ko02010,map02010	ko00000,ko00001,ko01000,ko02000	ABC transporter
LNEOGEMI_02563	1.04e-234	ygaE	-	-	S	-	-	-	Membrane
LNEOGEMI_02564	1.68e-312	gsaB	5.4.3.8	-	H	ko:K01845	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Glutamate-1-semialdehyde aminotransferase
LNEOGEMI_02565	4.67e-114	bcp	1.11.1.15	-	O	ko:K03564	-	ko00000,ko01000	Peroxiredoxin
LNEOGEMI_02566	1.8e-220	ghrA	-	-	EH	-	-	-	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LNEOGEMI_02567	6.47e-64	-	-	-	S	-	-	-	Cyclic-di-AMP receptor
LNEOGEMI_02568	1.18e-103	perR	-	-	P	ko:K09825	-	ko00000,ko03000	Belongs to the Fur family
LNEOGEMI_02569	6.28e-75	ygzB	-	-	S	-	-	-	UPF0295 protein
LNEOGEMI_02570	1.46e-117	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
LNEOGEMI_02571	6.11e-27	-	-	-	-	-	-	-	-
LNEOGEMI_02572	2.12e-27	tnpB	-	-	L	-	-	-	Belongs to the 'phage' integrase family
LNEOGEMI_02574	5e-100	-	-	-	-	-	-	-	-
LNEOGEMI_02575	1.58e-94	-	5.3.1.1	-	J	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Triosephosphate isomerase
LNEOGEMI_02576	2.04e-63	-	-	-	G	-	-	-	Ribose/Galactose Isomerase
LNEOGEMI_02577	9.4e-67	-	-	-	G	-	-	-	Ribose/Galactose Isomerase
LNEOGEMI_02578	7.55e-153	-	-	-	G	-	-	-	Dak1 domain
LNEOGEMI_02579	4.23e-95	-	5.3.1.15	-	S	ko:K09988	ko00040,map00040	ko00000,ko00001,ko01000	Pfam:DUF1498
LNEOGEMI_02580	4.61e-190	-	-	-	G	ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	Phosphotransferase system, EIIC
LNEOGEMI_02581	3.1e-45	-	-	-	G	-	-	-	PTS system, Lactose/Cellobiose specific IIB subunit
LNEOGEMI_02582	7.71e-64	-	2.7.1.202	-	G	ko:K02768	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LNEOGEMI_02583	3.04e-169	-	4.1.2.13	-	G	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-bisphosphate aldolase class-II
LNEOGEMI_02584	1.1e-77	-	-	-	K	-	-	-	DeoR C terminal sensor domain
LNEOGEMI_02585	0.0	gltD	1.3.1.1	-	E	ko:K17722	ko00240,ko00410,ko00770,ko01100,map00240,map00410,map00770,map01100	ko00000,ko00001,ko00002,ko01000	COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases
LNEOGEMI_02586	7.46e-297	preA	1.3.1.1	-	CF	ko:K17723	ko00240,ko00410,ko00770,ko01100,map00240,map00410,map00770,map01100	ko00000,ko00001,ko00002,ko01000	dihydroorotate dehydrogenase
LNEOGEMI_02587	0.0	hydA	3.5.2.2	-	F	ko:K01464	ko00240,ko00410,ko00770,ko00983,ko01100,map00240,map00410,map00770,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Amidohydrolase family
LNEOGEMI_02588	3.91e-09	-	-	-	-	-	-	-	-
LNEOGEMI_02589	5.04e-297	-	3.5.1.6, 3.5.1.87	-	E	ko:K06016	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases
LNEOGEMI_02590	0.0	-	-	-	E	-	-	-	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LNEOGEMI_02591	2.49e-80	-	-	-	F	-	-	-	PFAM AIG2 family protein
LNEOGEMI_02592	6.05e-47	-	-	-	S	-	-	-	Integral membrane protein
LNEOGEMI_02593	2.22e-280	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
LNEOGEMI_02594	0.0	-	-	-	S	-	-	-	Hypothetical glycosyl hydrolase 6
LNEOGEMI_02595	1.19e-282	-	-	-	G	-	-	-	Bacterial extracellular solute-binding protein
LNEOGEMI_02596	1.89e-162	-	-	-	G	-	-	-	ABC transporter permease
LNEOGEMI_02597	4.59e-188	-	-	-	G	-	-	-	ABC-type polysaccharide transport system, permease component
LNEOGEMI_02598	0.0	-	-	-	G	-	-	-	beta-galactosidase
LNEOGEMI_02599	3.03e-296	-	-	-	S	-	-	-	Hypothetical glycosyl hydrolase 6
LNEOGEMI_02600	4.8e-137	glxR	1.1.1.31	-	I	ko:K00020	ko00280,ko01100,map00280,map01100	ko00000,ko00001,ko01000	3-hydroxyisobutyrate dehydrogenase
LNEOGEMI_02603	4.36e-227	-	-	-	S	-	-	-	Tetratricopeptide repeat
LNEOGEMI_02604	0.0	-	-	-	T	-	-	-	Domain present in phytochromes and cGMP-specific phosphodiesterases.
LNEOGEMI_02605	0.0	-	-	-	C	ko:K22187	ko00040,map00040	ko00000,ko00001,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
LNEOGEMI_02606	8.05e-196	-	1.1.1.31	-	I	ko:K00020	ko00280,ko01100,map00280,map01100	ko00000,ko00001,ko01000	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
LNEOGEMI_02607	6.03e-177	-	-	-	S	-	-	-	Protein of unknown function (DUF3100)
LNEOGEMI_02608	7.53e-94	-	-	-	S	-	-	-	An automated process has identified a potential problem with this gene model
LNEOGEMI_02610	5.93e-60	-	-	-	-	-	-	-	-
LNEOGEMI_02611	0.0	pepA	3.4.11.1	-	E	ko:K01255	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
LNEOGEMI_02612	1.5e-101	yuiD	-	-	S	ko:K09775	-	ko00000	protein conserved in bacteria
LNEOGEMI_02613	1.84e-140	yuiC	-	-	S	-	-	-	protein conserved in bacteria
LNEOGEMI_02614	2.61e-61	yuiB	-	-	S	-	-	-	Putative membrane protein
LNEOGEMI_02615	1.27e-292	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
LNEOGEMI_02616	3.18e-237	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	reductase
LNEOGEMI_02617	1.52e-262	mtlD	1.1.1.17	-	G	ko:K00009	ko00051,map00051	ko00000,ko00001,ko01000	COG0246 Mannitol-1-phosphate altronate dehydrogenases
LNEOGEMI_02618	2.29e-92	mtlF	2.7.1.197	-	G	ko:K02798	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG4668 Mannitol fructose-specific phosphotransferase system, IIA domain
LNEOGEMI_02619	0.0	mtlR	-	-	K	ko:K03483	-	ko00000,ko03000	transcriptional regulator, MtlR
LNEOGEMI_02620	0.0	mtlA	2.7.1.197	-	G	ko:K02799,ko:K02800	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG2213 Phosphotransferase system, mannitol-specific IIBC component
LNEOGEMI_02621	7.45e-195	-	-	-	ET	ko:K02424	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko02035	Belongs to the bacterial solute-binding protein 3 family
LNEOGEMI_02622	1.36e-138	yckA	-	-	P	ko:K10009	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0765 ABC-type amino acid transport system, permease component
LNEOGEMI_02623	7.18e-79	yutM	-	-	S	ko:K13628	-	ko00000,ko03016	Belongs to the HesB IscA family
LNEOGEMI_02624	3.32e-13	-	-	-	S	-	-	-	Spo0E like sporulation regulatory protein
LNEOGEMI_02625	1.47e-266	mqnE	2.5.1.120	-	H	ko:K18285	ko00130,ko01110,map00130,map01110	ko00000,ko00001,ko01000	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
LNEOGEMI_02626	7.49e-206	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
LNEOGEMI_02627	9.92e-57	-	-	-	-	-	-	-	-
LNEOGEMI_02628	3.63e-54	yuzB	-	-	S	-	-	-	Belongs to the UPF0349 family
LNEOGEMI_02629	0.0	yutJ	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
LNEOGEMI_02630	3.77e-68	yuzD	-	-	S	-	-	-	protein conserved in bacteria
LNEOGEMI_02631	4.25e-49	yutI	-	-	O	-	-	-	COG0694 Thioredoxin-like proteins and domains
LNEOGEMI_02632	5.44e-201	thrB	2.7.1.39	-	E	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
LNEOGEMI_02633	2.38e-252	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
LNEOGEMI_02634	1.71e-303	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
LNEOGEMI_02635	3.55e-258	yutH	-	-	S	-	-	-	Spore coat protein
LNEOGEMI_02636	1.37e-109	yutG	3.1.3.27	-	I	ko:K01095	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	COG1267 Phosphatidylglycerophosphatase A and related proteins
LNEOGEMI_02637	4.77e-167	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
LNEOGEMI_02638	1.78e-97	yutE	-	-	S	-	-	-	Protein of unknown function DUF86
LNEOGEMI_02639	1.79e-59	-	-	-	-	-	-	-	-
LNEOGEMI_02640	6.09e-67	yutD	-	-	S	-	-	-	protein conserved in bacteria
LNEOGEMI_02641	4.63e-119	yutC	-	-	S	-	-	-	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
LNEOGEMI_02642	4.43e-222	lipA	2.8.1.8	-	H	ko:K03644	ko00785,ko01100,map00785,map01100	ko00000,ko00001,ko01000	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
LNEOGEMI_02643	9.51e-254	lytH	-	-	M	ko:K21472	-	ko00000,ko01000,ko01002,ko01011	Peptidase, M23
LNEOGEMI_02644	0.0	-	-	-	C	ko:K18218	-	ko00000,ko00002,ko01504,ko02000	Na+/H+ antiporter family
LNEOGEMI_02645	2.12e-177	yunB	-	-	S	-	-	-	Sporulation protein YunB (Spo_YunB)
LNEOGEMI_02646	2.2e-115	dfrA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
LNEOGEMI_02647	1.35e-198	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
LNEOGEMI_02648	7.97e-65	yunC	-	-	S	-	-	-	Domain of unknown function (DUF1805)
LNEOGEMI_02649	0.0	yunD	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
LNEOGEMI_02650	7.85e-177	yunE	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
LNEOGEMI_02651	2.02e-214	yunF	-	-	S	-	-	-	Protein of unknown function DUF72
LNEOGEMI_02652	1.7e-84	-	-	-	S	-	-	-	Domain of unknown function (DUF5082)
LNEOGEMI_02653	1.26e-67	-	-	-	-	-	-	-	-
LNEOGEMI_02654	7.58e-190	-	-	-	-	-	-	-	-
LNEOGEMI_02656	1.03e-53	-	-	-	-	-	-	-	-
LNEOGEMI_02657	8.46e-53	-	-	-	-	-	-	-	-
LNEOGEMI_02658	1.86e-56	-	-	-	-	-	-	-	-
LNEOGEMI_02659	2.05e-200	-	-	-	S	-	-	-	LXG domain of WXG superfamily
LNEOGEMI_02660	8.5e-55	-	-	-	S	-	-	-	Family of unknown function (DUF5344)
LNEOGEMI_02661	4.37e-45	-	-	-	S	-	-	-	Pathogenicity locus
LNEOGEMI_02662	1.32e-102	-	-	-	H	-	-	-	RibD C-terminal domain
LNEOGEMI_02663	3.03e-196	-	-	-	S	-	-	-	Phosphotransferase enzyme family
LNEOGEMI_02664	7.66e-116	yvbU	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_02665	2.33e-144	-	-	-	EGP	ko:K08164	-	ko00000,ko02000	COG2814 Arabinose efflux permease
LNEOGEMI_02666	1.16e-217	-	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
LNEOGEMI_02667	2.24e-174	msmR	-	-	K	-	-	-	AraC family transcriptional regulator
LNEOGEMI_02668	2.71e-233	-	-	-	C	ko:K19265	-	ko00000,ko01000	Aldo/keto reductase family
LNEOGEMI_02669	1.07e-181	-	-	-	Q	-	-	-	Methyltransferase domain
LNEOGEMI_02670	4.57e-53	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	beta-glucosidase activity
LNEOGEMI_02671	8.7e-65	licT	-	-	K	ko:K03488	-	ko00000,ko03000	transcriptional antiterminator
LNEOGEMI_02672	1.51e-23	-	-	-	S	-	-	-	YhfH-like protein
LNEOGEMI_02673	4.52e-300	aceA	4.1.3.1	-	C	ko:K01637	ko00630,ko01100,ko01110,ko01120,ko01200,map00630,map01100,map01110,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Isocitrate lyase
LNEOGEMI_02674	0.0	sufB	-	-	O	ko:K07033,ko:K09014	-	ko00000	FeS cluster assembly
LNEOGEMI_02675	2.18e-101	nifU	-	-	C	ko:K04488	-	ko00000	COG0822 NifU homolog involved in Fe-S cluster formation
LNEOGEMI_02676	1.44e-297	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LNEOGEMI_02677	6.58e-311	sufD	-	-	O	ko:K07033,ko:K09015	-	ko00000	assembly protein SufD
LNEOGEMI_02678	8.04e-186	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component
LNEOGEMI_02679	4.09e-80	yurZ	-	-	S	-	-	-	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LNEOGEMI_02680	2.26e-214	-	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component
LNEOGEMI_02681	1.55e-122	-	-	-	S	-	-	-	Cobalamin adenosyltransferase
LNEOGEMI_02682	1.39e-197	metQ	-	-	P	ko:K02072,ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the NlpA lipoprotein family
LNEOGEMI_02683	8.61e-147	metI	-	-	P	ko:K02069,ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG2011 ABC-type metal ion transport system, permease component
LNEOGEMI_02684	1.1e-234	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LNEOGEMI_02685	6.74e-84	gcvH	-	-	E	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	ko00000,ko00001,ko00002	Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate
LNEOGEMI_02686	5.61e-82	yusI	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	Belongs to the ArsC family
LNEOGEMI_02687	0.0	fadE	1.3.8.1	-	I	ko:K00248	ko00071,ko00280,ko00650,ko01100,ko01110,ko01120,ko01200,ko01212,map00071,map00280,map00650,map01100,map01110,map01120,map01200,map01212	ko00000,ko00001,ko01000	acyl-CoA dehydrogenase
LNEOGEMI_02688	3.25e-269	fadA	2.3.1.16	-	I	ko:K00632	ko00071,ko00280,ko00281,ko00362,ko00592,ko00642,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00362,map00592,map00642,map01100,map01110,map01120,map01130,map01212	ko00000,ko00001,ko00002,ko01000	Belongs to the thiolase family
LNEOGEMI_02689	0.0	fadN	1.1.1.35	-	I	ko:K07516	ko00071,ko00362,ko00650,ko01100,ko01120,ko01200,ko01212,map00071,map00362,map00650,map01100,map01120,map01200,map01212	ko00000,ko00001,ko00002,ko01000	3-hydroxyacyl-CoA dehydrogenase
LNEOGEMI_02690	4.97e-273	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
LNEOGEMI_02691	0.0	-	-	-	S	-	-	-	Sugar transport-related sRNA regulator N-term
LNEOGEMI_02692	1.24e-157	-	-	-	S	-	-	-	Glycosyltransferase like family
LNEOGEMI_02694	6.85e-07	-	-	-	-	-	-	-	-
LNEOGEMI_02695	2.62e-139	lip	3.1.1.3	-	S	ko:K01046	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko00002,ko01000	acetyltransferases and hydrolases with the alpha beta hydrolase fold
LNEOGEMI_02696	6.5e-306	gabT	2.6.1.19	-	E	ko:K00823	ko00250,ko00410,ko00640,ko00650,ko01100,ko01120,map00250,map00410,map00640,map00650,map01100,map01120	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LNEOGEMI_02697	1.97e-310	-	-	-	S	-	-	-	protein conserved in bacteria
LNEOGEMI_02698	3.31e-79	-	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
LNEOGEMI_02700	1.31e-103	smpB	-	-	O	ko:K03664	-	ko00000	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
LNEOGEMI_02701	1.27e-80	-	-	-	L	ko:K07496	-	ko00000	Transposase
LNEOGEMI_02702	2.03e-78	-	-	-	S	ko:K15977	-	ko00000	DoxX
LNEOGEMI_02703	0.0	rnr	-	-	K	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
LNEOGEMI_02704	1.24e-177	est	3.1.1.1	-	S	ko:K03928	-	ko00000,ko01000	Carboxylesterase
LNEOGEMI_02705	1.06e-176	-	3.1.1.1	-	S	ko:K03928	-	ko00000,ko01000	COG1647 Esterase lipase
LNEOGEMI_02706	1.05e-224	yceB	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LNEOGEMI_02707	1.94e-37	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase subunit SecG
LNEOGEMI_02708	4.54e-100	yclD	-	-	-	-	-	-	-
LNEOGEMI_02709	0.0	-	-	-	S	ko:K07793	ko02020,map02020	ko00000,ko00001,ko02000	Tripartite tricarboxylate transporter TctA family
LNEOGEMI_02710	1.35e-81	-	-	-	S	-	-	-	Tripartite tricarboxylate transporter TctB family
LNEOGEMI_02711	5.54e-219	-	-	-	S	-	-	-	Tripartite tricarboxylate transporter family receptor
LNEOGEMI_02712	1.25e-282	-	4.2.1.158	-	M	ko:K20022	-	ko00000,ko01000	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
LNEOGEMI_02713	0.0	-	-	-	C	ko:K22187	ko00040,map00040	ko00000,ko00001,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
LNEOGEMI_02714	6.52e-218	-	4.3.3.7	-	EM	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Dihydrodipicolinate synthetase family
LNEOGEMI_02715	1.93e-151	-	-	-	K	-	-	-	FCD
LNEOGEMI_02716	9.59e-305	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
LNEOGEMI_02717	0.0	gpmI	5.4.2.12	-	G	ko:K15633	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of 2-phosphoglycerate and
LNEOGEMI_02718	3.78e-169	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
LNEOGEMI_02719	5.42e-275	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
LNEOGEMI_02720	4.9e-239	gapA	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
LNEOGEMI_02721	2.48e-229	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain
LNEOGEMI_02722	7.17e-258	rapA	-	-	S	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	ko00000,ko00001,ko01000	Response regulator aspartate phosphatase
LNEOGEMI_02724	3.02e-53	XAC3035	-	-	O	ko:K06191	-	ko00000	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
LNEOGEMI_02725	2.81e-296	sigL	-	-	K	ko:K03092	ko02020,ko05111,map02020,map05111	ko00000,ko00001,ko03021	COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog
LNEOGEMI_02727	6.73e-133	clpP	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
LNEOGEMI_02728	1.04e-288	-	-	-	E	-	-	-	Peptidase dimerisation domain
LNEOGEMI_02729	8.04e-72	-	-	-	S	ko:K09940	-	ko00000	Domain of unknown function (DUF4870)
LNEOGEMI_02730	9.01e-272	opuCA	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1125 ABC-type proline glycine betaine transport systems, ATPase components
LNEOGEMI_02731	2.12e-138	opuCB	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1174 ABC-type proline glycine betaine transport systems, permease component
LNEOGEMI_02732	3.91e-215	opuCC	-	-	M	ko:K05845	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1732 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
LNEOGEMI_02733	2.76e-142	opuCD	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1174 ABC-type proline glycine betaine transport systems, permease component
LNEOGEMI_02734	4.57e-51	crh	-	-	G	ko:K11184	-	ko00000	Phosphocarrier protein Chr
LNEOGEMI_02735	1.97e-228	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
LNEOGEMI_02736	3e-225	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
LNEOGEMI_02737	4.57e-213	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
LNEOGEMI_02738	4.29e-116	yvcI	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	Nudix hydrolase
LNEOGEMI_02739	8.31e-226	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
LNEOGEMI_02740	2.1e-247	yvcD	-	-	S	-	-	-	COG0457 FOG TPR repeat
LNEOGEMI_02741	1.86e-305	cypC	1.11.2.4	-	Q	ko:K15629	-	ko00000,ko00199,ko01000	Cytochrome P450
LNEOGEMI_02742	3.98e-155	ydeD	-	-	EG	-	-	-	COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
LNEOGEMI_02743	2.07e-136	-	-	-	K	-	-	-	AraC-like ligand binding domain
LNEOGEMI_02744	8.46e-161	-	-	-	K	-	-	-	FR47-like protein
LNEOGEMI_02745	3.31e-143	hisI	3.5.4.19, 3.6.1.31	-	E	ko:K01496,ko:K11755	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	belongs to the PRA-CH family
LNEOGEMI_02746	1.05e-171	hisF	-	-	E	ko:K02500	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
LNEOGEMI_02747	2.89e-163	hisA	5.3.1.16	-	E	ko:K01814	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
LNEOGEMI_02748	5.92e-142	hisH	-	-	E	ko:K02501	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
LNEOGEMI_02749	3.1e-138	hisB	4.2.1.19	-	E	ko:K01693	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	imidazoleglycerol-phosphate dehydratase
LNEOGEMI_02750	3e-290	hisD	1.1.1.23, 1.1.1.308	-	E	ko:K00013,ko:K15509	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LNEOGEMI_02751	3.41e-144	hisG	2.4.2.17	-	E	ko:K00765,ko:K02502	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
LNEOGEMI_02752	6.37e-278	hisZ	-	-	E	ko:K02502	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
LNEOGEMI_02753	1.43e-105	yvoF	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	COG0110 Acetyltransferase (isoleucine patch superfamily)
LNEOGEMI_02754	2.32e-151	ppaX	3.6.1.1	-	S	ko:K06019	ko00190,map00190	ko00000,ko00001,ko01000	Hydrolyzes pyrophosphate formed during P-Ser-HPr dephosphorylation by HPrK P. Might play a role in controlling the intracellular pyrophosphate pool
LNEOGEMI_02755	2.78e-204	yvoD	-	-	P	-	-	-	COG0370 Fe2 transport system protein B
LNEOGEMI_02756	8.3e-190	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LNEOGEMI_02757	2.18e-218	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Also phosphorylates dephosphorylates the HPr-like catabolite repression protein crh on a specific serine residue. Therefore, by controlling the phosphorylation state of HPr and crh, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
LNEOGEMI_02758	2.08e-63	yvlD	-	-	S	ko:K08972	-	ko00000	Membrane
LNEOGEMI_02759	7.33e-16	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain protein
LNEOGEMI_02760	1.29e-200	yvlB	-	-	S	-	-	-	Putative adhesin
LNEOGEMI_02761	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
LNEOGEMI_02762	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
LNEOGEMI_02763	3.73e-216	yoaV3	-	-	EG	-	-	-	EamA-like transporter family
LNEOGEMI_02764	3.27e-258	minJ	-	-	O	-	-	-	COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LNEOGEMI_02765	0.0	ctpB	3.4.21.102	-	M	ko:K03797	-	ko00000,ko01000,ko01002	Belongs to the peptidase S41A family
LNEOGEMI_02766	3.87e-163	-	-	-	D	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	peptidase
LNEOGEMI_02767	1.27e-193	ftsX	-	-	D	ko:K09811	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03036	Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
LNEOGEMI_02768	2.48e-159	ftsE	-	-	D	ko:K09812	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03036	cell division ATP-binding protein FtsE
LNEOGEMI_02769	5.34e-188	yvjA	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2179)
LNEOGEMI_02770	1.02e-232	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
LNEOGEMI_02771	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
LNEOGEMI_02772	6.07e-126	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LNEOGEMI_02773	4.78e-42	cspC	-	-	K	ko:K03704	-	ko00000,ko03000	cold-shock protein
LNEOGEMI_02774	2.56e-187	-	-	-	-	-	-	-	-
LNEOGEMI_02776	3.64e-86	fliS	-	-	N	ko:K02422	ko02040,map02040	ko00000,ko00001,ko02035	flagellar protein FliS
LNEOGEMI_02777	0.0	fliD	-	-	N	ko:K02407	ko02040,map02040	ko00000,ko00001,ko02035	morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
LNEOGEMI_02778	2.52e-63	flaG	-	-	N	ko:K06603	-	ko00000,ko02035	flagellar protein FlaG
LNEOGEMI_02779	2.29e-44	csrA	-	-	T	ko:K03563	ko02020,ko02025,ko02026,ko05111,map02020,map02025,map02026,map05111	ko00000,ko00001,ko03019	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
LNEOGEMI_02780	7.62e-97	fliW	-	-	S	ko:K13626	-	ko00000,ko02035	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
LNEOGEMI_02781	3.43e-239	flgL	-	-	N	ko:K02397	ko02040,map02040	ko00000,ko00001,ko02035	Belongs to the bacterial flagellin family
LNEOGEMI_02782	0.0	flgK	-	-	N	ko:K02396	ko02040,map02040	ko00000,ko00001,ko02035	flagellar hook-associated protein
LNEOGEMI_02783	2.18e-07	yvyG	-	-	NOU	-	-	-	Flagellar biosynthesis protein FlgN
LNEOGEMI_02784	3.56e-52	-	-	-	N	ko:K02398	ko02020,ko02025,ko02026,ko02040,map02020,map02025,map02026,map02040	ko00000,ko00001,ko02035	Anti-sigma-28 factor, FlgM
LNEOGEMI_02785	4.48e-98	yvyF	-	-	S	-	-	-	flagellar protein
LNEOGEMI_02786	1.43e-160	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Phosphoribosyl transferase domain
LNEOGEMI_02787	1.11e-307	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	COG4098 Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
LNEOGEMI_02788	4.62e-189	degV	-	-	S	-	-	-	protein conserved in bacteria
LNEOGEMI_02789	4.63e-162	degU	-	-	KT	ko:K02479,ko:K07692	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
LNEOGEMI_02790	7.16e-257	degS	2.7.13.3	-	T	ko:K07683,ko:K07777	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Member of the two-component regulatory system DegS DegU, which plays an important role in the transition growth phase
LNEOGEMI_02791	4.51e-148	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	Domain of unknown function (DUF1949)
LNEOGEMI_02792	2.15e-131	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
LNEOGEMI_02793	2.13e-309	oppA1	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0747 ABC-type dipeptide transport system, periplasmic component
LNEOGEMI_02794	2.87e-162	oppC	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	binding-protein-dependent transport systems inner membrane component
LNEOGEMI_02795	1.3e-176	oppB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
LNEOGEMI_02796	9.43e-169	oppF	-	-	P	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
LNEOGEMI_02797	3.01e-185	oppD	-	-	P	ko:K02031,ko:K16202	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
LNEOGEMI_02798	5.98e-105	-	-	-	K	ko:K03718	-	ko00000,ko03000	helix_turn_helix ASNC type
LNEOGEMI_02799	3.2e-244	ywtF_2	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_02800	0.0	acsA	6.2.1.1	-	I	ko:K01895	ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko01004	COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases
LNEOGEMI_02801	2.34e-154	acuA	-	-	K	ko:K04766	-	ko00000,ko01000	Part of the acuABC operon, which is possibly involved in the breakdown of acetoin and butanediol. Acts as an acetyltransferase inactivating acetyl-CoA synthetase AcsA via acetylation at a Lys residue
LNEOGEMI_02802	1.55e-142	acuB	-	-	S	ko:K04767	-	ko00000	Acetoin utilization protein AcuB
LNEOGEMI_02803	1.95e-294	acuC	-	-	BQ	ko:K04768	-	ko00000	histone deacetylase
LNEOGEMI_02804	5.04e-237	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
LNEOGEMI_02805	1.18e-251	aroA	2.5.1.54, 5.4.99.5	-	E	ko:K03856,ko:K13853	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate
LNEOGEMI_02806	6.48e-27	ytxH	-	-	S	-	-	-	COG4980 Gas vesicle protein
LNEOGEMI_02807	1.38e-83	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
LNEOGEMI_02808	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
LNEOGEMI_02809	0.0	sftA	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
LNEOGEMI_02810	9.11e-134	ytpR	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
LNEOGEMI_02811	5.66e-187	ytpQ	-	-	S	-	-	-	Belongs to the UPF0354 family
LNEOGEMI_02812	1.15e-73	ytpP	-	-	CO	-	-	-	Thioredoxin
LNEOGEMI_02813	1.06e-183	-	-	-	S	ko:K07035	-	ko00000	Phosphotransferase system, EIIC
LNEOGEMI_02814	7.88e-100	ytoQ	-	-	S	-	-	-	Nucleoside 2-deoxyribosyltransferase YtoQ
LNEOGEMI_02815	6.99e-112	yjjX	-	-	F	-	-	-	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
LNEOGEMI_02816	4.52e-262	pepA	3.4.11.7	-	G	ko:K01261,ko:K01269	-	ko00000,ko01000,ko01002	COG1363 Cellulase M and related proteins
LNEOGEMI_02817	5.27e-64	ytzB	-	-	-	-	-	-	-
LNEOGEMI_02818	2.52e-155	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
LNEOGEMI_02820	9.14e-197	ytmP	-	-	M	-	-	-	Phosphotransferase
LNEOGEMI_02821	1.04e-209	purU	3.5.1.10	-	F	ko:K01433	ko00630,ko00670,map00630,map00670	ko00000,ko00001,ko01000	Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4)
LNEOGEMI_02822	2.27e-161	-	-	-	IQ	-	-	-	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
LNEOGEMI_02823	7.62e-68	-	-	-	S	-	-	-	PFAM Uncharacterised protein family UPF0150
LNEOGEMI_02824	1.65e-268	acoC	2.3.1.12	-	C	ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
LNEOGEMI_02825	6.01e-246	acoB	-	-	C	ko:K21417	-	ko00000,ko01000	COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
LNEOGEMI_02826	1.28e-224	acoA	-	-	C	ko:K21416	-	ko00000,ko01000	COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
LNEOGEMI_02827	1.57e-276	lpdA	1.8.1.4	-	C	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
LNEOGEMI_02828	0.0	acoR	-	-	KQ	ko:K21405	-	ko00000,ko03000	COG3284 Transcriptional activator of acetoin glycerol metabolism
LNEOGEMI_02829	4.53e-148	cidB	-	-	M	-	-	-	effector of murein hydrolase
LNEOGEMI_02830	1.52e-79	-	-	-	S	ko:K06518	-	ko00000,ko02000	Increases the activity of extracellular murein hydrolases possibly by mediating their export via hole formation. Inhibited by the antiholin-like proteins LrgAB. In an unstressed cell, the LrgAB products probably inhibit the function of the CidA protein. When a cell is stressed by the addition of antibiotics or by other factors in the environment, CidA possibly oligomerizes within the bacterial cell membrane, creating lesions that disrupt the proton motive force, which in turn results in loss of cell viability. These lesions are also hypothesized to regulate the subsequent cell lysis by either allowing the murein hydrolases access to the cell wall substrate and or regulating their activity by a
LNEOGEMI_02831	2.67e-130	ytlP	3.1.4.58	-	J	ko:K01975	-	ko00000,ko01000,ko03016	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
LNEOGEMI_02832	2.85e-214	ytkP	2.5.1.47	-	E	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
LNEOGEMI_02833	1.71e-206	ydeE	-	-	K	ko:K13653	-	ko00000,ko03000	AraC family transcriptional regulator
LNEOGEMI_02834	1.9e-124	-	-	-	C	-	-	-	oxidoreductases (related to aryl-alcohol dehydrogenases)
LNEOGEMI_02835	1.28e-67	-	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferases, including N-acetylases of ribosomal proteins
LNEOGEMI_02836	2.76e-99	fosB	-	-	H	ko:K11210,ko:K21252	-	ko00000,ko01000,ko01504	Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor
LNEOGEMI_02837	4.69e-43	ytzE	-	-	K	-	-	-	COG1349 Transcriptional regulators of sugar metabolism
LNEOGEMI_02838	2.58e-219	-	-	-	K	-	-	-	COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain
LNEOGEMI_02839	2.85e-98	srlR	-	-	K	-	-	-	Glucitol operon activator
LNEOGEMI_02840	2.18e-126	srlA	-	-	G	ko:K02783	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko02000	PTS system enzyme II sorbitol-specific factor
LNEOGEMI_02841	1.68e-229	srlE	2.7.1.198	-	G	ko:K02782,ko:K02783	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol sorbitol-specific transporter subunit IIB
LNEOGEMI_02842	2.8e-72	srlB	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
LNEOGEMI_02843	5.87e-182	-	1.1.1.140	-	C	ko:K00068	ko00051,map00051	ko00000,ko00001,ko01000	Enoyl-(Acyl carrier protein) reductase
LNEOGEMI_02844	3.71e-140	ydfE	-	-	S	-	-	-	Flavin reductase like domain
LNEOGEMI_02845	7.98e-155	ydfF	-	-	K	-	-	-	helix_turn_helix, Arsenical Resistance Operon Repressor
LNEOGEMI_02846	1.9e-204	-	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	D-alanyl-D-alanine carboxypeptidase
LNEOGEMI_02847	5.48e-258	-	-	-	T	-	-	-	Histidine kinase
LNEOGEMI_02848	5.03e-165	yrkP	-	-	T	ko:K02483	-	ko00000,ko02022	Transcriptional regulator
LNEOGEMI_02849	3.31e-239	speB	3.5.3.11	-	E	ko:K01480	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko00002,ko01000	Arginase family
LNEOGEMI_02850	7.77e-151	-	-	-	S	-	-	-	HTH domain
LNEOGEMI_02851	4.15e-265	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
LNEOGEMI_02852	5.78e-220	eutB	4.3.1.19	-	E	ko:K01754	ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Pyridoxal-phosphate dependent enzyme
LNEOGEMI_02853	1.16e-212	-	4.3.1.12	-	E	ko:K01750	ko00330,ko01110,ko01130,ko01230,map00330,map01110,map01130,map01230	ko00000,ko00001,ko01000	Ornithine cyclodeaminase/mu-crystallin family
LNEOGEMI_02854	9.81e-06	-	-	-	S	-	-	-	Sporulation inhibitor A
LNEOGEMI_02855	9.09e-149	yhcQ	-	-	M	-	-	-	Spore coat protein
LNEOGEMI_02856	1.74e-309	ycgH	-	-	E	ko:K03293	-	ko00000	COG1113 Gamma-aminobutyrate permease and related permeases
LNEOGEMI_02857	6.62e-140	ycgF	-	-	E	-	-	-	Lysine exporter protein LysE YggA
LNEOGEMI_02858	1.4e-186	yjqC	-	-	P	ko:K07217	-	ko00000	Catalase
LNEOGEMI_02859	2.03e-27	-	-	-	S	-	-	-	Domain of unknown function (DUF5082)
LNEOGEMI_02860	6.97e-45	-	-	-	S	-	-	-	Family of unknown function (DUF5344)
LNEOGEMI_02861	4.34e-316	-	-	-	S	-	-	-	LXG domain of WXG superfamily
LNEOGEMI_02862	5.61e-107	-	-	-	S	-	-	-	SMI1-KNR4 cell-wall
LNEOGEMI_02863	2.84e-20	-	-	-	S	-	-	-	Protein of unknown function, DUF600
LNEOGEMI_02864	1.06e-54	-	-	-	S	-	-	-	Protein of unknown function, DUF600
LNEOGEMI_02865	2.75e-105	-	-	-	S	-	-	-	Protein of unknown function (DUF1569)
LNEOGEMI_02866	1.19e-97	yuxK	-	-	S	-	-	-	protein conserved in bacteria
LNEOGEMI_02867	5.73e-120	ykkA	-	-	S	-	-	-	Protein of unknown function (DUF664)
LNEOGEMI_02868	0.0	-	-	-	K	ko:K18907	-	ko00000,ko00002,ko01504,ko03000	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
LNEOGEMI_02869	6.8e-135	argO	-	-	S	ko:K06895	-	ko00000,ko02000	Lysine exporter protein LysE YggA
LNEOGEMI_02870	4.28e-97	lrpC	-	-	K	ko:K03719	-	ko00000,ko03000,ko03036	helix_turn_helix ASNC type
LNEOGEMI_02871	6.63e-95	-	-	-	S	-	-	-	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LNEOGEMI_02872	0.0	spaK	2.7.13.3	-	T	ko:K20487	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	His Kinase A (phosphoacceptor) domain
LNEOGEMI_02873	2.14e-155	spaR	-	-	K	ko:K20488	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C terminal
LNEOGEMI_02874	1.84e-161	spaG	-	-	S	ko:K20492	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko00002,ko02000	ABC-2 family transporter protein
LNEOGEMI_02875	1.45e-157	spaE	-	-	S	ko:K20491	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko00002,ko02000	ABC-2 family transporter protein
LNEOGEMI_02876	5.81e-155	spaF	-	-	V	ko:K01990,ko:K20490	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
LNEOGEMI_02877	4.98e-218	yisR1	3.2.1.23	-	K	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	AraC-like ligand binding domain
LNEOGEMI_02878	0.0	-	-	-	S	ko:K09955	-	ko00000	Beta-L-arabinofuranosidase, GH127
LNEOGEMI_02879	0.0	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
LNEOGEMI_02880	8.01e-215	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_02881	1.58e-192	malG	-	-	G	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_02882	9.8e-124	-	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
LNEOGEMI_02883	7.25e-83	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
LNEOGEMI_02884	2.51e-261	ytpB	4.2.3.130	-	S	ko:K16188	-	ko00000,ko01000	Tetraprenyl-beta-curcumene synthase
LNEOGEMI_02885	0.0	-	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0747 ABC-type dipeptide transport system, periplasmic component
LNEOGEMI_02886	1.34e-199	-	-	-	K	-	-	-	LysR substrate binding domain
LNEOGEMI_02887	1.92e-299	aroA	2.5.1.19	-	E	ko:K00800	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
LNEOGEMI_02888	1.2e-198	yocS	-	-	S	ko:K03453	-	ko00000	-transporter
LNEOGEMI_02889	0.0	dld	1.1.2.4, 1.1.3.15	-	C	ko:K00102,ko:K00104	ko00620,ko00630,ko01100,ko01110,ko01120,ko01130,map00620,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	Glycolate oxidase subunit
LNEOGEMI_02890	0.0	-	-	-	T	-	-	-	COG0642 Signal transduction histidine kinase
LNEOGEMI_02891	7.39e-103	ebsC	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LNEOGEMI_02892	4.61e-251	sbp	-	-	P	ko:K02048	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	COG1613 ABC-type sulfate transport system, periplasmic component
LNEOGEMI_02893	2.4e-172	cysT	-	-	O	ko:K02046	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	COG0555 ABC-type sulfate transport system, permease component
LNEOGEMI_02894	2.72e-172	cysW	-	-	P	ko:K02047	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	COG4208 ABC-type sulfate transport system, permease component
LNEOGEMI_02895	2.21e-253	cysA	3.6.3.25	-	P	ko:K02045	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
LNEOGEMI_02896	6.07e-228	-	-	-	-	-	-	-	-
LNEOGEMI_02897	4.58e-177	-	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	transport system, ATPase component
LNEOGEMI_02898	8.1e-218	-	-	-	S	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
LNEOGEMI_02899	2.46e-224	-	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	transport system, periplasmic component
LNEOGEMI_02900	3.51e-291	-	-	-	S	ko:K07112	-	ko00000	Sulphur transport
LNEOGEMI_02901	0.0	XK27_11280	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
LNEOGEMI_02902	5.46e-233	dppD	-	-	P	ko:K02031,ko:K16202	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
LNEOGEMI_02903	8.75e-236	appF	-	-	E	ko:K02032,ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
LNEOGEMI_02904	0.0	hbpA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0747 ABC-type dipeptide transport system, periplasmic component
LNEOGEMI_02905	1.14e-232	dppB	-	-	EP	ko:K02033	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
LNEOGEMI_02906	8.08e-206	dppC	-	-	EP	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
LNEOGEMI_02907	1.08e-207	pepI	3.4.11.5	-	I	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Alpha/beta hydrolase family
LNEOGEMI_02908	6.97e-131	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
LNEOGEMI_02909	7.66e-308	-	-	-	V	-	-	-	MatE
LNEOGEMI_02910	1.09e-180	-	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LNEOGEMI_02911	2.12e-183	ptxC	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
LNEOGEMI_02912	1.42e-174	phnE	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
LNEOGEMI_02913	2.99e-178	phnC	3.6.3.28	-	P	ko:K02041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
LNEOGEMI_02914	1.21e-216	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphonate ABC transporter
LNEOGEMI_02915	0.0	uvrD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
LNEOGEMI_02916	4.03e-223	-	-	-	S	ko:K07120	-	ko00000	Pfam:AmoA
LNEOGEMI_02917	6.67e-174	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
LNEOGEMI_02918	3.61e-297	-	-	-	S	-	-	-	protein conserved in bacteria
LNEOGEMI_02919	1.29e-190	pdxK	2.7.1.35, 2.7.1.49, 2.7.4.7	-	H	ko:K00868,ko:K00941	ko00730,ko00750,ko01100,map00730,map00750,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
LNEOGEMI_02920	0.0	hutH	4.3.1.3	-	E	ko:K01745	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Histidine ammonia-lyase
LNEOGEMI_02921	8.36e-63	azlD	-	-	S	-	-	-	Branched-chain amino acid transport protein (AzlD)
LNEOGEMI_02922	1.65e-159	-	-	-	E	-	-	-	AzlC protein
LNEOGEMI_02923	8.99e-31	gntR9	-	-	K	-	-	-	Alanine-glyoxylate amino-transferase
LNEOGEMI_02924	1.51e-38	bceB	-	-	V	ko:K11632,ko:K19080	ko01503,ko02010,ko02020,ko05150,map01503,map02010,map02020,map05150	ko00000,ko00001,ko00002,ko01504,ko02000	ABC transporter (permease)
LNEOGEMI_02925	6.29e-309	-	-	-	S	-	-	-	dienelactone hydrolase
LNEOGEMI_02926	0.0	-	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	Glutamine synthetase, catalytic domain
LNEOGEMI_02927	6.26e-94	-	-	-	S	-	-	-	Protein of unknown function (DUF4064)
LNEOGEMI_02928	1.37e-98	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
LNEOGEMI_02929	0.0	cshA	3.6.4.13	-	JKL	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
LNEOGEMI_02930	1.39e-101	bdbA	-	-	CO	-	-	-	Thioredoxin
LNEOGEMI_02931	2.52e-93	bdbC	-	-	O	ko:K03611	-	ko00000,ko03110	Required for disulfide bond formation in some proteins
LNEOGEMI_02932	0.0	yhfW	-	-	CE	-	-	-	COG0665 Glycine D-amino acid oxidases (deaminating)
LNEOGEMI_02934	3.41e-108	yuaF	-	-	OU	-	-	-	Membrane protein implicated in regulation of membrane protease activity
LNEOGEMI_02935	1.89e-240	yuaG	-	-	S	ko:K07192	ko04910,map04910	ko00000,ko00001,ko03036,ko04131,ko04147	protein conserved in bacteria
LNEOGEMI_02936	2.19e-166	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine aminopeptidase
LNEOGEMI_02937	4.31e-312	phoB	3.1.3.1	-	P	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	Belongs to the alkaline phosphatase family
LNEOGEMI_02938	0.0	topB	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LNEOGEMI_02939	4.01e-280	ywbD	2.1.1.191	-	J	ko:K06969	-	ko00000,ko01000,ko03009	Methyltransferase
LNEOGEMI_02940	4.66e-56	ydzA	-	-	EGP	-	-	-	Domain of unknown function (DUF3817)
LNEOGEMI_02941	7.27e-73	yflT	-	-	S	-	-	-	Heat induced stress protein YflT
LNEOGEMI_02942	2.04e-128	-	-	-	S	-	-	-	UPF0302 domain
LNEOGEMI_02943	2.76e-192	mntD	-	-	P	ko:K11709,ko:K19976	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	'COG1108 ABC-type Mn2 Zn2 transport systems, permease components'
LNEOGEMI_02944	1.62e-204	XK27_03890	-	-	P	ko:K11705,ko:K11708,ko:K19976	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1108 ABC-type Mn2 Zn2 transport systems, permease components
LNEOGEMI_02945	1.14e-179	mntB	3.6.3.35	-	P	ko:K02074,ko:K09820,ko:K11710,ko:K19973	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	'COG1121 ABC-type Mn Zn transport systems, ATPase component'
LNEOGEMI_02946	1.8e-221	troA	-	-	P	ko:K11707	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
LNEOGEMI_02948	8.04e-187	ycsE	3.1.3.104	-	S	ko:K21064	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolases of the HAD superfamily
LNEOGEMI_02949	0.0	dapE	-	-	E	-	-	-	Peptidase dimerisation domain
LNEOGEMI_02950	2.9e-275	-	-	-	S	-	-	-	Acetyltransferase
LNEOGEMI_02951	0.0	mcpA	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis protein
LNEOGEMI_02952	0.0	pncB	6.3.4.21	-	H	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LNEOGEMI_02953	7.59e-269	yxlH	-	-	EGP	-	-	-	Major Facilitator Superfamily
LNEOGEMI_02954	1.43e-123	-	-	-	S	-	-	-	DinB superfamily
LNEOGEMI_02955	0.0	katX	1.11.1.6	-	P	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	ko00000,ko00001,ko00002,ko01000	serves to protect cells from the toxic effects of hydrogen peroxide
LNEOGEMI_02956	0.0	ywjA	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
LNEOGEMI_02957	2.36e-216	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	cell wall formation
LNEOGEMI_02958	1.29e-140	ywrF	-	-	S	-	-	-	COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LNEOGEMI_02959	2.38e-141	yrbG	-	-	S	-	-	-	membrane
LNEOGEMI_02960	6.94e-209	bmrU	-	-	I	-	-	-	COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
LNEOGEMI_02962	5.37e-24	-	-	-	-	-	-	-	-
LNEOGEMI_02963	7.1e-177	-	-	-	K	-	-	-	TipAS antibiotic-recognition domain
LNEOGEMI_02964	2.28e-219	-	-	-	O	-	-	-	Predicted Zn-dependent protease (DUF2268)
LNEOGEMI_02965	1.58e-133	-	-	-	K	-	-	-	GrpB protein
LNEOGEMI_02966	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LNEOGEMI_02967	1.65e-97	-	-	-	L	-	-	-	Bacterial transcription activator, effector binding domain
LNEOGEMI_02968	6.43e-146	-	-	-	-	-	-	-	-
LNEOGEMI_02969	2.64e-151	-	-	-	-	-	-	-	-
LNEOGEMI_02970	0.0	chiA	3.2.1.14	GH18	G	ko:K01183	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Glycoside Hydrolase Family 18
LNEOGEMI_02971	3.4e-176	ybgA	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
LNEOGEMI_02972	1.44e-169	celCD	2.7.1.196, 2.7.1.205, 3.5.1.105	-	G	ko:K02759,ko:K03478	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Probably catalyzes the deacetylation of acetylated carbohydrates an important step in the degradation of oligosaccharides
LNEOGEMI_02973	8.09e-315	-	3.2.1.86	GT4	G	ko:K01222	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
LNEOGEMI_02974	1.87e-306	ywbA	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LNEOGEMI_02975	4.82e-67	celC	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
LNEOGEMI_02976	9.97e-59	licB	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
LNEOGEMI_02977	2.36e-156	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form
LNEOGEMI_02978	1.8e-117	-	-	-	-	-	-	-	-
LNEOGEMI_02979	8.22e-203	-	-	-	P	-	-	-	Arsenic resistance protein
LNEOGEMI_02980	3.91e-162	-	3.4.17.11	-	E	ko:K01295	-	ko00000,ko01000,ko01002	Peptidase dimerisation domain
LNEOGEMI_02981	7.11e-107	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
LNEOGEMI_02982	2.49e-248	ycgA	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
LNEOGEMI_02983	9.32e-289	cstA	-	-	T	-	-	-	Carbon starvation protein
LNEOGEMI_02984	6.32e-27	XK27_00085	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix domain
LNEOGEMI_02985	1.1e-30	-	-	-	-	-	-	-	-
LNEOGEMI_02986	6.31e-233	ybcL	-	-	EGP	ko:K08164	-	ko00000,ko02000	COG2814 Arabinose efflux permease
LNEOGEMI_02987	1.38e-132	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
LNEOGEMI_02988	3.61e-132	ubiX	2.5.1.129	-	H	ko:K03186	ko00130,ko00627,ko00940,ko01100,ko01110,ko01120,ko01220,map00130,map00627,map00940,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
LNEOGEMI_02989	1.14e-194	yjmF	-	-	IQ	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
LNEOGEMI_02990	9.97e-271	uxuA	4.2.1.8	-	G	ko:K01686	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the dehydration of D-mannonate
LNEOGEMI_02991	6.97e-239	yjmD	1.1.1.380	-	E	ko:K08322	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	Alcohol dehydrogenase GroES-like domain
LNEOGEMI_02992	0.0	-	-	-	C	ko:K13796	-	ko00000	COG1053 Succinate dehydrogenase fumarate reductase, flavoprotein subunit
LNEOGEMI_02993	1.2e-241	icd	1.1.1.41, 1.1.1.42, 1.1.1.85	-	CE	ko:K00030,ko:K00031,ko:K00052	ko00020,ko00290,ko00480,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00290,map00480,map00660,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146	br01601,ko00000,ko00001,ko00002,ko01000	Isocitrate/isopropylmalate dehydrogenase
LNEOGEMI_02994	6.51e-214	yraN	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_02995	3.74e-265	-	-	-	S	-	-	-	Tripartite tricarboxylate transporter family receptor
LNEOGEMI_02996	0.0	-	-	-	S	-	-	-	Tripartite tricarboxylate transporter TctA family
LNEOGEMI_02997	2.43e-84	-	-	-	S	-	-	-	Tripartite tricarboxylate transporter TctB family
LNEOGEMI_02998	9.28e-271	yraM	-	-	S	-	-	-	PrpF protein
LNEOGEMI_02999	2.84e-77	-	-	-	K	-	-	-	GntR family transcriptional regulator
LNEOGEMI_03000	2.12e-194	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
LNEOGEMI_03001	1.22e-20	-	-	-	-	-	-	-	-
LNEOGEMI_03002	0.0	cysI	1.8.1.2, 1.8.7.1	-	P	ko:K00381,ko:K00392	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate
LNEOGEMI_03003	0.0	cysJ	1.8.1.2	-	P	ko:K00380	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
LNEOGEMI_03004	6.72e-129	sirC	1.3.1.76, 4.99.1.4	-	H	ko:K02304	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Siroheme synthase
LNEOGEMI_03005	7.09e-178	cbiX	4.99.1.3	-	C	ko:K03795	ko00860,ko01100,ko01120,map00860,map01100,map01120	ko00000,ko00001,ko01000	CbiX
LNEOGEMI_03006	0.0	nasF	2.1.1.107, 4.2.1.75	-	H	ko:K13542	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the precorrin methyltransferase family
LNEOGEMI_03007	1.47e-144	cysC	2.7.1.25	-	P	ko:K00860	ko00230,ko00920,ko01100,ko01120,map00230,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of activated sulfate
LNEOGEMI_03008	2.3e-235	cysP	-	-	P	ko:K16331	-	ko00000,ko02000	phosphate transporter
LNEOGEMI_03009	3.39e-276	sat	2.7.7.4	-	P	ko:K00958	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the sulfate adenylyltransferase family
LNEOGEMI_03010	1.24e-178	cysH	1.8.4.10, 1.8.4.8	-	EH	ko:K00390	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the PAPS reductase family. CysH subfamily
LNEOGEMI_03011	1.35e-203	-	-	-	S	-	-	-	Carbohydrate esterase, sialic acid-specific acetylesterase
LNEOGEMI_03012	4.42e-118	-	-	-	K	-	-	-	Transcriptional regulator PadR-like family
LNEOGEMI_03013	3.72e-158	ssuB	-	-	P	ko:K02049,ko:K15555	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system
LNEOGEMI_03014	2.18e-170	ssuC	-	-	P	ko:K15554	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component
LNEOGEMI_03015	6.22e-266	ssuD	1.14.14.28, 1.14.14.5	-	C	ko:K04091,ko:K20938	ko00920,map00920	ko00000,ko00001,ko01000	Catalyzes the desulfonation of aliphatic sulfonates
LNEOGEMI_03016	6.13e-213	-	-	-	P	ko:K02051,ko:K15553	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
LNEOGEMI_03017	1.52e-108	ssuE	1.5.1.38, 1.5.1.45	-	S	ko:K00299,ko:K16902	ko00380,ko00740,ko00920,ko01100,map00380,map00740,map00920,map01100	ko00000,ko00001,ko01000	FMN reductase
LNEOGEMI_03018	1.5e-09	-	-	-	S	-	-	-	Uncharacterized small protein (DUF2292)
LNEOGEMI_03019	2.71e-99	-	-	-	-	-	-	-	-
LNEOGEMI_03020	2.61e-155	yflK	-	-	S	-	-	-	protein conserved in bacteria
LNEOGEMI_03021	8.25e-182	-	2.7.1.196, 2.7.1.205	-	K	ko:K02760,ko:K20480	ko00500,ko02024,ko02060,map00500,map02024,map02060	ko00000,ko00001,ko00002,ko01000,ko02000,ko03000	sequence-specific DNA binding
LNEOGEMI_03022	2.01e-289	gntT	-	-	EG	-	-	-	gluconate transmembrane transporter activity
LNEOGEMI_03024	1.82e-309	-	-	-	-	-	-	-	-
LNEOGEMI_03025	0.0	yngI	-	-	IQ	ko:K00666	-	ko00000,ko01000,ko01004	COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
LNEOGEMI_03026	6.94e-59	M1-594	-	-	S	-	-	-	Thiamine-binding protein
LNEOGEMI_03027	1.61e-256	chrA	-	-	P	ko:K07240	-	ko00000,ko02000	chromate transporter, chromate ion transporter
LNEOGEMI_03028	9.77e-280	tctA	-	-	S	ko:K07793	ko02020,map02020	ko00000,ko00001,ko02000	Tripartite tricarboxylate transporter TctA family
LNEOGEMI_03029	4.57e-63	-	-	-	S	ko:K07794	ko02020,map02020	ko00000,ko00001,ko02000	Tripartite tricarboxylate transporter TctB family
LNEOGEMI_03030	9.44e-184	yflP	-	-	S	-	-	-	Tripartite tricarboxylate transporter family receptor
LNEOGEMI_03031	1.16e-85	citT	-	-	T	ko:K11638	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
LNEOGEMI_03032	1.72e-203	citS	2.7.13.3	-	T	ko:K11614,ko:K11637	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Signal transduction histidine kinase regulating citrate malate metabolism
LNEOGEMI_03033	2.4e-42	-	5.3.2.6	-	S	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Tautomerase enzyme
LNEOGEMI_03034	2.11e-263	-	-	-	EGP	-	-	-	Uncharacterised MFS-type transporter YbfB
LNEOGEMI_03035	2.45e-218	-	-	-	E	-	-	-	Thermophilic metalloprotease (M29)
LNEOGEMI_03036	6.57e-144	-	-	-	E	ko:K14591	-	ko00000	AroM protein
LNEOGEMI_03037	2.24e-212	-	-	-	S	-	-	-	Protein of unknown function (DUF1177)
LNEOGEMI_03038	4.74e-244	-	-	-	S	ko:K09703	-	ko00000	Protein of unknown function (DUF917)
LNEOGEMI_03039	0.0	-	-	-	S	-	-	-	OPT oligopeptide transporter protein
LNEOGEMI_03040	6e-139	-	-	-	E	-	-	-	Asp/Glu/Hydantoin racemase
LNEOGEMI_03041	0.0	-	-	-	KT	ko:K09684	-	ko00000,ko03000	PucR C-terminal helix-turn-helix domain
LNEOGEMI_03042	1.46e-282	yrbE	-	-	S	-	-	-	Oxidoreductase family, C-terminal alpha/beta domain
LNEOGEMI_03043	9.48e-157	-	-	-	S	ko:K09992	-	ko00000	Trehalose utilisation
LNEOGEMI_03044	3.52e-274	xylR5	-	-	GK	-	-	-	ROK family
LNEOGEMI_03045	8.59e-249	mro	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Converts alpha-aldose to the beta-anomer
LNEOGEMI_03046	0.0	xylB	2.7.1.17	-	G	ko:K00854	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	xylulose kinase
LNEOGEMI_03047	0.0	xylA	5.3.1.5	-	G	ko:K01805	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko01000	Belongs to the xylose isomerase family
LNEOGEMI_03048	4.63e-175	-	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_03049	3.91e-307	yodQ	3.5.1.16, 3.5.1.18	-	E	ko:K01438,ko:K01439	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Acetylornithine deacetylase
LNEOGEMI_03050	7.64e-222	-	-	-	S	-	-	-	Protein of unknown function (DUF1177)
LNEOGEMI_03051	3.03e-242	-	-	-	E	ko:K02032,ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
LNEOGEMI_03052	3.73e-240	-	-	-	P	ko:K02031,ko:K16202	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
LNEOGEMI_03053	4.75e-192	-	-	-	EP	ko:K02034,ko:K13891	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
LNEOGEMI_03054	9.9e-216	-	-	-	EP	ko:K02033	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
LNEOGEMI_03055	0.0	-	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0747 ABC-type dipeptide transport system, periplasmic component
LNEOGEMI_03056	8.29e-252	-	-	-	Q	-	-	-	COG1228 Imidazolonepropionase and related amidohydrolases
LNEOGEMI_03057	3.27e-276	hutI	-	-	Q	-	-	-	COG1228 Imidazolonepropionase and related amidohydrolases
LNEOGEMI_03059	8.66e-43	-	-	-	D	-	-	-	nuclear chromosome segregation
LNEOGEMI_03060	1.94e-248	gldA	1.1.1.6	-	C	ko:K00005	ko00561,ko00640,ko01100,map00561,map00640,map01100	ko00000,ko00001,ko01000	COG0371 Glycerol dehydrogenase and related enzymes
LNEOGEMI_03061	8.36e-145	-	-	-	S	-	-	-	Protein of unknown function, DUF624
LNEOGEMI_03062	0.0	-	-	-	G	ko:K17318	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
LNEOGEMI_03063	2.69e-197	-	-	-	G	ko:K17320	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0395 ABC-type sugar transport system, permease component
LNEOGEMI_03064	3.12e-223	-	-	-	G	ko:K17319	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_03065	0.0	aguA	3.2.1.139	-	G	ko:K01235	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 67 family
LNEOGEMI_03066	0.0	xynB	3.2.1.37	GH43	G	ko:K01198	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 43 family
LNEOGEMI_03067	3.72e-214	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
LNEOGEMI_03068	4.2e-241	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LNEOGEMI_03069	3.91e-145	-	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG2011 ABC-type metal ion transport system, permease component
LNEOGEMI_03070	6.67e-202	metQ_3	-	-	M	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
LNEOGEMI_03071	1.78e-284	hmrA	-	-	S	ko:K12941,ko:K21613	-	ko00000,ko01000,ko01002	amidohydrolase
LNEOGEMI_03072	4.97e-236	-	-	-	S	-	-	-	Putative nucleotide-binding of sugar-metabolising enzyme
LNEOGEMI_03073	7.1e-162	garR	1.1.1.60	-	I	ko:K00042	ko00630,ko01100,map00630,map01100	ko00000,ko00001,ko01000	COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
LNEOGEMI_03074	9.69e-228	-	-	-	EG	ko:K03299	-	ko00000,ko02000	COG2610 H gluconate symporter and related permeases
LNEOGEMI_03075	2.6e-131	ybbH	-	-	K	-	-	-	RpiR family transcriptional regulator
LNEOGEMI_03076	1.31e-202	-	4.1.3.4	-	E	ko:K01640	ko00072,ko00280,ko00281,ko00650,ko01100,ko04146,map00072,map00280,map00281,map00650,map01100,map04146	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA lyase
LNEOGEMI_03077	6.35e-146	-	-	-	K	-	-	-	FCD domain
LNEOGEMI_03078	3.89e-284	bbsF_2	2.8.3.16	-	C	ko:K07749	-	ko00000,ko01000	acyl-CoA transferases carnitine dehydratase
LNEOGEMI_03079	5.45e-29	-	-	-	-	-	-	-	-
LNEOGEMI_03080	0.0	-	-	-	E	-	-	-	Sodium:solute symporter family
LNEOGEMI_03081	2.72e-194	-	-	-	-	-	-	-	-
LNEOGEMI_03082	7.03e-150	yjaU	-	-	I	-	-	-	carboxylic ester hydrolase activity
LNEOGEMI_03083	2.18e-184	-	5.1.3.2	-	GM	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	RmlD substrate binding domain
LNEOGEMI_03084	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
LNEOGEMI_03085	5.14e-19	comZ	-	-	S	ko:K02254	-	ko00000,ko02044	Competence protein ComG
LNEOGEMI_03087	8.46e-212	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LNEOGEMI_03088	7.41e-294	fabF	2.3.1.179	-	I	ko:K09458,ko:K14660	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
LNEOGEMI_03089	0.0	-	2.7.7.19, 2.7.7.72	-	J	ko:K00970,ko:K00974	ko03013,ko03018,map03013,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	Poly A polymerase head domain
LNEOGEMI_03091	1.58e-132	-	3.5.1.28	-	M	ko:K01449	-	ko00000,ko01000	Cell Wall Hydrolase
LNEOGEMI_03092	1.6e-171	ykwD	-	-	J	-	-	-	protein with SCP PR1 domains
LNEOGEMI_03093	2.13e-228	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
LNEOGEMI_03094	2.04e-174	ywaC	2.7.6.5	-	S	ko:K00951,ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	protein conserved in bacteria
LNEOGEMI_03095	1.92e-197	yjaZ	-	-	O	-	-	-	Zn-dependent protease
LNEOGEMI_03096	3.16e-180	yjbA	-	-	S	-	-	-	Belongs to the UPF0736 family
LNEOGEMI_03097	1.94e-15	-	-	-	-	-	-	-	-
LNEOGEMI_03098	4.12e-228	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Tryptophanyl-tRNA synthetase
LNEOGEMI_03100	3.34e-132	-	-	-	CO	-	-	-	Redoxin
LNEOGEMI_03101	1.76e-127	yueE	-	-	S	ko:K06950	-	ko00000	phosphohydrolase
LNEOGEMI_03102	2.48e-143	yplQ	-	-	S	ko:K11068	-	ko00000,ko02042	protein, Hemolysin III
LNEOGEMI_03103	1.34e-12	yoeD	-	-	G	-	-	-	Helix-turn-helix domain
LNEOGEMI_03104	6.91e-296	-	-	-	S	-	-	-	Putative glycosyl hydrolase domain
LNEOGEMI_03105	6.86e-126	yjbC	-	-	K	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
LNEOGEMI_03107	2.03e-87	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
LNEOGEMI_03108	1.11e-147	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC
LNEOGEMI_03109	7.1e-260	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
LNEOGEMI_03111	4.97e-219	yjbH	-	-	Q	-	-	-	dithiol-disulfide isomerase involved in polyketide biosynthesis
LNEOGEMI_03112	1.67e-95	yjbI	-	-	S	ko:K06886	-	ko00000	COG2346 Truncated hemoglobins
LNEOGEMI_03113	1.68e-135	yjbJ	-	-	M	-	-	-	COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
LNEOGEMI_03114	1.72e-122	yjbK	-	-	S	-	-	-	protein conserved in bacteria
LNEOGEMI_03115	3.08e-81	yjbL	-	-	S	-	-	-	Belongs to the UPF0738 family
LNEOGEMI_03116	1.02e-142	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	GTP pyrophosphokinase
LNEOGEMI_03117	7.48e-193	nadK	2.7.1.23	-	G	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LNEOGEMI_03118	7.23e-208	rluD	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
LNEOGEMI_03119	3.37e-176	fabI	1.3.1.10, 1.3.1.9	-	I	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl- acyl-carrier-protein reductase NADH
LNEOGEMI_03120	2e-75	-	-	-	S	-	-	-	Protein of unknown function (DUF1360)
LNEOGEMI_03121	1.34e-177	-	-	-	Q	-	-	-	ubiE/COQ5 methyltransferase family
LNEOGEMI_03122	1.85e-152	-	-	-	-	-	-	-	-
LNEOGEMI_03123	1.7e-174	-	-	-	-	-	-	-	-
LNEOGEMI_03125	6.94e-07	-	-	-	-	-	-	-	-
LNEOGEMI_03126	1.77e-94	cotX	-	-	S	ko:K06342	-	ko00000	Spore Coat Protein X and V domain
LNEOGEMI_03127	1.12e-74	-	-	-	-	-	-	-	-
LNEOGEMI_03128	0.0	yjcD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
LNEOGEMI_03129	3.34e-224	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LNEOGEMI_03130	7.69e-232	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	COG1459 Type II secretory pathway, component PulF
LNEOGEMI_03137	3.99e-197	-	-	-	S	-	-	-	Phenazine biosynthesis-like protein
LNEOGEMI_03138	7.09e-88	-	-	-	J	-	-	-	L-PSP family endoribonuclease
LNEOGEMI_03139	3.37e-290	-	-	-	F	-	-	-	Belongs to the Nudix hydrolase family
LNEOGEMI_03140	1.11e-59	-	-	-	GM	-	-	-	NmrA-like family
LNEOGEMI_03141	2.1e-67	-	-	-	S	ko:K04750	-	ko00000	3-demethylubiquinone-9 3-methyltransferase
LNEOGEMI_03142	3.65e-94	-	-	-	K	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
LNEOGEMI_03143	2.87e-83	azlC	-	-	E	-	-	-	AzlC protein
LNEOGEMI_03144	3.75e-62	azlC	-	-	E	-	-	-	AzlC protein
LNEOGEMI_03145	9.83e-66	azlD	-	-	E	-	-	-	Branched-chain amino acid transport protein (AzlD)
LNEOGEMI_03146	4.23e-87	frataxin	-	-	S	ko:K05937	-	ko00000	Domain of unknown function (DU1801)
LNEOGEMI_03147	8.68e-74	-	-	-	K	ko:K03892	-	ko00000,ko03000	helix_turn_helix, Arsenical Resistance Operon Repressor
LNEOGEMI_03148	1.27e-95	-	-	-	K	-	-	-	Activator of Hsp90 ATPase homolog 1-like protein
LNEOGEMI_03149	0.0	-	-	-	L	-	-	-	ABC transporter
LNEOGEMI_03150	2.75e-154	-	-	-	C	-	-	-	Oxidoreductase NAD-binding domain
LNEOGEMI_03151	2.8e-85	-	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
LNEOGEMI_03152	4.62e-252	ycsA	1.1.1.83, 1.1.1.93, 4.1.1.73	-	CE	ko:K07246	ko00630,ko00650,map00630,map00650	ko00000,ko00001,ko01000	Tartrate dehydrogenase
LNEOGEMI_03153	3.63e-143	ydhC	-	-	K	-	-	-	FCD
LNEOGEMI_03155	6.33e-207	catE	1.13.11.2	-	S	ko:K07104	ko00361,ko00362,ko00622,ko00643,ko01100,ko01120,ko01220,map00361,map00362,map00622,map00643,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	glyoxalase
LNEOGEMI_03156	4.57e-295	oxdD	4.1.1.2	-	G	ko:K01569	ko00630,ko01100,map00630,map01100	ko00000,ko00001,ko01000	Oxalate decarboxylase
LNEOGEMI_03158	2.71e-98	arsC	1.20.4.1	-	T	ko:K03741	-	ko00000,ko01000	Catalyzes the reduction of arsenate As(V) to arsenite As(III)
LNEOGEMI_03159	1.61e-277	ydfA	-	-	P	ko:K03893	-	ko00000,ko02000	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LNEOGEMI_03160	9.94e-71	arsR	-	-	K	ko:K03892,ko:K22043	-	ko00000,ko03000	transcriptional
LNEOGEMI_03161	1.86e-86	cadI	4.4.1.5	-	E	ko:K01759	ko00620,map00620	ko00000,ko00001,ko01000	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
LNEOGEMI_03162	2.26e-65	arsR	-	-	K	ko:K03892	-	ko00000,ko03000	ArsR family transcriptional regulator
LNEOGEMI_03163	1.91e-98	ydeB	-	-	K	ko:K07736	-	ko00000,ko03000	Transcription factor
LNEOGEMI_03164	3.48e-40	cspL	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
LNEOGEMI_03165	4.37e-213	mviM3	-	-	S	ko:K03810	-	ko00000	Oxidoreductase family, NAD-binding Rossmann fold
LNEOGEMI_03166	3.02e-128	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
LNEOGEMI_03167	0.0	-	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
LNEOGEMI_03168	4.09e-276	-	-	-	G	-	-	-	COG1593 TRAP-type C4-dicarboxylate transport system, large permease component
LNEOGEMI_03169	8.48e-106	-	-	-	G	-	-	-	Tripartite ATP-independent periplasmic transporters, DctQ component
LNEOGEMI_03170	5.04e-233	-	-	-	G	-	-	-	Bacterial extracellular solute-binding protein, family 7
LNEOGEMI_03171	5.31e-217	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
LNEOGEMI_03172	4.59e-173	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
LNEOGEMI_03173	0.0	yvcC1	3.6.3.44	-	V	ko:K02021,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter
LNEOGEMI_03174	2.19e-188	murR	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_03175	1.19e-232	pdxA	1.1.1.408, 1.1.1.409	-	H	ko:K22024	-	ko00000,ko01000	Belongs to the PdxA family
LNEOGEMI_03176	1.08e-303	-	2.7.1.219, 2.7.1.220	-	S	ko:K22129	-	ko00000,ko01000	Putative nucleotide-binding of sugar-metabolising enzyme
LNEOGEMI_03177	3.28e-213	kdgT	-	-	P	ko:K02526	-	ko00000,ko02000	The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system
LNEOGEMI_03179	0.0	-	-	-	K	-	-	-	Propionate catabolism activator
LNEOGEMI_03180	1.55e-195	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
LNEOGEMI_03181	5.27e-299	ybbF	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
LNEOGEMI_03182	6.69e-241	yleB	4.2.1.126	-	S	ko:K07106,ko:K09963	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Bacterial protein of unknown function (DUF871)
LNEOGEMI_03183	8.01e-229	purR15	-	-	K	ko:K02529	-	ko00000,ko03000	Bacterial regulatory proteins, lacI family
LNEOGEMI_03184	0.0	ydhP	3.2.1.21, 3.2.1.86	GT1	G	ko:K01223,ko:K05350	ko00010,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
LNEOGEMI_03185	1.29e-191	-	-	-	GK	-	-	-	ROK family
LNEOGEMI_03186	7.03e-194	-	-	-	G	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_03187	5.44e-207	-	-	-	P	ko:K02026,ko:K10242	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0395 ABC-type sugar transport system, permease component
LNEOGEMI_03188	6.59e-278	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
LNEOGEMI_03189	2.42e-189	manA3	3.2.1.78	GH26	G	ko:K01218	ko00051,ko02024,map00051,map02024	ko00000,ko00001,ko01000	Endoglucanase
LNEOGEMI_03190	8.39e-47	-	-	-	S	-	-	-	Protein of unknown function (DUF2642)
LNEOGEMI_03191	1.51e-17	-	-	-	-	-	-	-	-
LNEOGEMI_03192	1.35e-126	-	-	-	S	-	-	-	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
LNEOGEMI_03193	9.12e-174	-	-	-	C	-	-	-	alcohol dehydrogenase
LNEOGEMI_03194	4.47e-99	-	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_03195	3.23e-70	fdx5	-	-	C	-	-	-	2Fe-2S iron-sulfur cluster binding domain
LNEOGEMI_03196	1.06e-28	-	-	-	-	-	-	-	-
LNEOGEMI_03197	0.0	-	-	-	KT	-	-	-	Transcriptional regulator
LNEOGEMI_03198	1.89e-275	adhB	1.1.1.1, 1.1.1.202	-	C	ko:K00001,ko:K00086	ko00010,ko00071,ko00350,ko00561,ko00625,ko00626,ko00640,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00561,map00625,map00626,map00640,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
LNEOGEMI_03199	3.31e-284	-	-	-	EG	-	-	-	COG2610 H gluconate symporter and related permeases
LNEOGEMI_03200	7.35e-221	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
LNEOGEMI_03201	2.98e-252	-	-	-	C	ko:K19954	-	ko00000,ko01000	alcohol dehydrogenase
LNEOGEMI_03202	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
LNEOGEMI_03203	0.0	-	-	-	EG	ko:K06295	-	ko00000	Bacillus/Clostridium GerA spore germination protein
LNEOGEMI_03204	6.42e-84	-	-	-	-	-	-	-	-
LNEOGEMI_03205	3.43e-114	ectA	2.3.1.178	-	K	ko:K06718	ko00260,ko01100,ko01120,map00260,map01100,map01120	ko00000,ko00001,ko00002,ko01000	L-2,4-diaminobutyric acid acetyltransferase
LNEOGEMI_03206	7.39e-312	ectB	2.6.1.76	-	E	ko:K00836	ko00260,ko01100,ko01120,ko01210,ko01230,map00260,map01100,map01120,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LNEOGEMI_03207	1.59e-99	ectC	4.2.1.108	-	S	ko:K06720	ko00260,ko01100,ko01120,map00260,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Catalyzes the circularization of gamma-N-acetyl- alpha,gamma-diaminobutyric acid (ADABA) to ectoine (1,4,5,6- tetrahydro-2-methyl-4-pyrimidine carboxylic acid), which is an excellent osmoprotectant
LNEOGEMI_03208	1.92e-316	-	-	-	G	ko:K02027,ko:K05813	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Glycerol-3-phosphate ABC transporter substrate-binding protein
LNEOGEMI_03209	9.78e-188	-	-	-	G	-	-	-	Xylose isomerase-like TIM barrel
LNEOGEMI_03210	9.2e-210	-	-	-	G	ko:K02025,ko:K05814	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter (permease)
LNEOGEMI_03211	6.89e-190	-	-	-	P	ko:K05815	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PFAM binding-protein-dependent transport systems inner membrane component
LNEOGEMI_03212	6.37e-247	-	3.6.3.20	-	P	ko:K05816	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Belongs to the ABC transporter superfamily
LNEOGEMI_03214	2.85e-284	-	-	-	KLT	-	-	-	Protein kinase domain
LNEOGEMI_03217	4.87e-96	-	-	-	H	-	-	-	Tellurite resistance protein TehB
LNEOGEMI_03218	2.77e-64	-	-	-	S	-	-	-	ABC-2 family transporter protein
LNEOGEMI_03220	0.0	alkK	-	-	IQ	ko:K00666	-	ko00000,ko01000,ko01004	COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
LNEOGEMI_03221	0.0	-	6.2.1.3	-	IQ	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	AMP-binding enzyme C-terminal domain
LNEOGEMI_03222	4.94e-260	yhfS	2.3.1.9	-	I	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
LNEOGEMI_03223	4e-114	rapA	-	-	S	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	ko00000,ko00001,ko01000	Response regulator aspartate phosphatase
LNEOGEMI_03225	9.15e-50	-	-	-	S	-	-	-	Family of unknown function (DUF5344)
LNEOGEMI_03226	1.72e-300	-	-	-	S	-	-	-	LXG domain of WXG superfamily
LNEOGEMI_03227	2.38e-103	-	-	-	S	-	-	-	SMI1-KNR4 cell-wall
LNEOGEMI_03229	7.03e-177	dhrS4	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the short-chain dehydrogenases reductases (SDR) family
LNEOGEMI_03230	3.32e-240	yneE	-	-	K	-	-	-	Arabinose-binding domain of AraC transcription regulator, N-term
LNEOGEMI_03232	1.85e-96	nsrR	-	-	K	ko:K13771	ko05132,map05132	ko00000,ko00001,ko03000	Transcriptional regulator
LNEOGEMI_03233	1.39e-297	hmp	1.14.12.17, 1.18.1.3	-	C	ko:K05916,ko:K15765	ko00623,ko00920,ko01100,ko01120,ko01220,ko05132,map00623,map00920,map01100,map01120,map01220,map05132	ko00000,ko00001,ko00002,ko01000	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LNEOGEMI_03234	0.0	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Glycerophosphoryl diester phosphodiesterase family
LNEOGEMI_03235	4.27e-253	ugpC	3.6.3.20	-	P	ko:K05816,ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Belongs to the ABC transporter superfamily
LNEOGEMI_03236	2.71e-207	ugpA	-	-	G	ko:K02025,ko:K05814	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter (permease)
LNEOGEMI_03237	1.36e-177	ugpE	-	-	P	ko:K05815	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Glycerol-3-phosphate ABC transporter permease
LNEOGEMI_03238	4.49e-300	ugpB	-	-	G	ko:K02027,ko:K05813	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Glycerol-3-phosphate ABC transporter substrate-binding protein
LNEOGEMI_03239	1.05e-175	glpQ1	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
LNEOGEMI_03240	5.53e-266	-	-	-	EGP	ko:K08162	-	ko00000,ko02000	Major Facilitator Superfamily
LNEOGEMI_03241	0.0	-	-	-	G	ko:K17318	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
LNEOGEMI_03242	1.83e-188	-	-	-	G	-	-	-	Haloacid dehalogenase-like hydrolase
LNEOGEMI_03243	4.85e-119	-	-	-	K	ko:K02443	-	ko00000,ko03000	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
LNEOGEMI_03244	3.65e-224	-	-	-	G	ko:K17319	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_03245	2.5e-199	-	-	-	G	ko:K17320	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0395 ABC-type sugar transport system, permease component
LNEOGEMI_03246	3.59e-153	yhdW	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
LNEOGEMI_03247	4.62e-223	-	-	-	G	-	-	-	Xylose isomerase-like TIM barrel
LNEOGEMI_03248	3.63e-248	-	1.1.1.361	-	S	ko:K18652	-	ko00000,ko01000	Oxidoreductase family, C-terminal alpha/beta domain
LNEOGEMI_03249	1.79e-131	ykoP	-	-	G	-	-	-	polysaccharide deacetylase
LNEOGEMI_03250	2.85e-237	-	-	-	-	-	-	-	-
LNEOGEMI_03251	1.8e-178	fabG1	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
LNEOGEMI_03252	6.23e-179	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
LNEOGEMI_03253	2.95e-84	-	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
LNEOGEMI_03254	5.34e-214	hutG	3.5.3.8	-	E	ko:K01479	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N-formimidoyl-L-glutamate to L-glutamate and formamide
LNEOGEMI_03255	0.0	-	-	-	E	-	-	-	amino acid
LNEOGEMI_03256	4.6e-224	-	-	-	K	-	-	-	AraC-like ligand binding domain
LNEOGEMI_03257	0.0	rhaA	2.7.1.5, 5.3.1.14	-	G	ko:K00848,ko:K01813	ko00040,ko00051,ko01120,map00040,map00051,map01120	ko00000,ko00001,ko01000	Belongs to the rhamnose isomerase family
LNEOGEMI_03258	0.0	yuxG	-	-	IQ	-	-	-	Class II Aldolase and Adducin N-terminal domain
LNEOGEMI_03259	1.87e-68	rhaM	5.1.3.32	-	G	ko:K03534	-	ko00000,ko01000	Involved in the anomeric conversion of L-rhamnose
LNEOGEMI_03260	8.49e-285	-	-	-	EGP	ko:K06610	-	ko00000,ko02000	Major facilitator superfamily
LNEOGEMI_03261	1.61e-188	-	-	-	K	-	-	-	AraC-like ligand binding domain
LNEOGEMI_03262	5.8e-293	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
LNEOGEMI_03263	6.88e-277	-	-	-	EM	-	-	-	Protein of unknown function (DUF993)
LNEOGEMI_03264	4.71e-199	-	-	-	G	-	-	-	Xylose isomerase-like TIM barrel
LNEOGEMI_03265	1.21e-267	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
LNEOGEMI_03266	0.0	-	2.7.13.3	-	T	ko:K07718	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
LNEOGEMI_03267	2.58e-253	-	-	-	T	ko:K07720	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	helix_turn_helix, arabinose operon control protein
LNEOGEMI_03268	9.51e-316	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
LNEOGEMI_03269	5.85e-225	-	-	-	G	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_03270	1.15e-198	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_03271	8.17e-246	-	-	-	I	-	-	-	Acyltransferase family
LNEOGEMI_03272	3.16e-296	ciaH	2.7.13.3	-	T	ko:K14982	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	His Kinase A (phosphoacceptor) domain
LNEOGEMI_03273	5.64e-152	ykoG	-	-	T	ko:K02483	-	ko00000,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LNEOGEMI_03274	1.89e-162	-	-	-	S	-	-	-	L-2-amino-thiazoline-4-carboxylic acid hydrolase
LNEOGEMI_03276	1.25e-71	-	-	-	-	-	-	-	-
LNEOGEMI_03277	0.0	yesW	4.2.2.23, 4.2.2.24	PL11	E	ko:K18197,ko:K18198	-	ko00000,ko01000	cell wall organization
LNEOGEMI_03278	7.74e-299	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
LNEOGEMI_03279	6.96e-195	-	-	-	G	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_03280	5.94e-201	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_03281	0.0	abfA	3.2.1.55	GH51	G	ko:K01209	ko00520,map00520	ko00000,ko00001,ko01000	alpha-L-arabinofuranosidase activity
LNEOGEMI_03282	6.51e-308	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
LNEOGEMI_03283	5.07e-204	-	-	-	G	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_03284	6.38e-196	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_03285	5.32e-131	-	-	-	S	-	-	-	Protein of unknown function, DUF624
LNEOGEMI_03286	3.48e-216	M1-640	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_03287	1.21e-209	rhaR1	-	-	K	-	-	-	AraC-like ligand binding domain
LNEOGEMI_03288	6.56e-180	araL	-	-	G	ko:K02101	-	ko00000	Haloacid dehalogenase-like hydrolase
LNEOGEMI_03289	7.7e-275	egsA	1.1.1.261	-	C	ko:K00096	ko00564,map00564	ko00000,ko00001,ko01000	Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P). The G1P thus generated is probably used for the synthesis of phosphoglycerolipids in Gram-positive bacterial species
LNEOGEMI_03290	5.92e-174	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
LNEOGEMI_03291	0.0	araB	2.7.1.16	-	C	ko:K00853	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	Belongs to the ribulokinase family
LNEOGEMI_03292	0.0	araA	5.3.1.4	-	G	ko:K01804	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of L-arabinose to L-ribulose
LNEOGEMI_03293	4.61e-251	chvE	-	-	G	ko:K10546	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
LNEOGEMI_03294	0.0	araG	3.6.3.17	-	G	ko:K10548	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system
LNEOGEMI_03295	6.41e-247	araH	-	-	G	ko:K10544,ko:K10547	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
LNEOGEMI_03296	0.0	melA7	3.2.1.22	-	G	ko:K07406	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	Family 4 glycosyl hydrolase
LNEOGEMI_03297	1.28e-167	-	-	-	-	-	-	-	-
LNEOGEMI_03299	4.75e-101	-	-	-	S	-	-	-	Putative small multi-drug export protein
LNEOGEMI_03300	2.4e-142	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	Transport permease protein
LNEOGEMI_03301	6.72e-228	-	-	-	KTV	ko:K01990	-	ko00000,ko00002,ko02000	LytTr DNA-binding domain
LNEOGEMI_03302	2.37e-62	ykkD_1	-	-	P	ko:K18925	-	ko00000,ko00002,ko02000	Small Multidrug Resistance protein
LNEOGEMI_03303	2.06e-78	ykkC_1	-	-	P	ko:K18924	-	ko00000,ko00002,ko02000	Small Multidrug Resistance protein
LNEOGEMI_03304	3.47e-129	yvdT_1	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_03305	6.48e-303	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
LNEOGEMI_03306	1.95e-174	iolR	-	-	K	ko:K06608,ko:K11534	-	ko00000,ko03000	COG1349 Transcriptional regulators of sugar metabolism
LNEOGEMI_03307	0.0	iolA	1.2.1.18, 1.2.1.27	-	C	ko:K00140	ko00280,ko00410,ko00562,ko00640,ko01100,ko01200,map00280,map00410,map00562,map00640,map01100,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
LNEOGEMI_03308	7.71e-188	iolB	5.3.1.30	-	G	ko:K03337	ko00562,ko01100,ko01120,map00562,map01100,map01120	ko00000,ko00001,ko01000	Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate)
LNEOGEMI_03309	9.59e-221	iolC	2.7.1.92	-	G	ko:K03338	ko00562,ko01100,ko01120,map00562,map01100,map01120	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5- dehydro-2-deoxy-D-gluconate (DKGP)
LNEOGEMI_03310	0.0	iolD	3.7.1.22	-	E	ko:K03336	ko00562,ko01100,ko01120,map00562,map01100,map01120	ko00000,ko00001,ko01000	Involved in the cleavage of the C1-C2 bond of 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy- glucuronate (5DG)
LNEOGEMI_03311	8.21e-215	iolE	4.2.1.44	-	G	ko:K03335	ko00562,ko01100,ko01120,map00562,map01100,map01120	ko00000,ko00001,ko01000	Catalyzes the dehydration of inosose (2-keto-myo- inositol, 2KMI or 2,4,6 3,5-pentahydroxycyclohexanone) to 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi- inositol)
LNEOGEMI_03312	1.2e-240	iolG	1.1.1.18, 1.1.1.369	-	S	ko:K00010	ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130	ko00000,ko00001,ko01000	Involved in the oxidation of myo-inositol (MI) and D- chiro-inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D-chiro-inositol (1KDCI), respectively
LNEOGEMI_03313	4.1e-126	iolI	5.3.99.11	-	G	ko:K06606	ko00562,ko01120,map00562,map01120	ko00000,ko00001,ko01000	Involved in the reversible interconverion of 2-keto-myo- inositol (2KMI, inosose or 2,4,6 3,5-pentahydroxycyclohexanone) to 1-keto-D-chiro-inositol (1KDCI or 2,3,5 4,6- pentahydroxycyclohexanone)
LNEOGEMI_03314	1.45e-203	iolJ	4.1.2.13, 4.1.2.29	-	F	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Produces dihydroxyacetone phosphate (DHAP or glycerone phosphate) and malonic semialdehyde (MSA or 3-oxopropanoate) from 6-phospho-5-dehydro-2-deoxy-D-gluconate (DKGP)
LNEOGEMI_03315	3.34e-244	-	1.1.1.18, 1.1.1.369, 1.1.1.370	-	S	ko:K00010,ko:K16043	ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130	ko00000,ko00001,ko01000	Oxidoreductase family, NAD-binding Rossmann fold
LNEOGEMI_03316	0.0	-	-	-	S	ko:K03307	-	ko00000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LNEOGEMI_03317	6.57e-134	-	-	-	S	-	-	-	Protein of unknown function (DUF421)
LNEOGEMI_03318	1.66e-305	metY	2.5.1.49	-	E	ko:K01740	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	O-acetylhomoserine
LNEOGEMI_03319	2.95e-77	-	-	-	S	ko:K06940	-	ko00000	Putative zinc- or iron-chelating domain
LNEOGEMI_03320	7.02e-182	-	-	-	G	ko:K10119	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_03321	3.71e-209	-	-	-	G	ko:K10118	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_03322	1.83e-315	-	-	-	G	ko:K02027,ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
LNEOGEMI_03324	6.65e-204	-	-	-	K	-	-	-	AraC-like ligand binding domain
LNEOGEMI_03325	4.7e-238	-	1.1.1.380	-	E	ko:K08322	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko01000	Alcohol dehydrogenase GroES-like domain
LNEOGEMI_03326	3.89e-241	-	-	-	G	-	-	-	Bacterial extracellular solute-binding protein, family 7
LNEOGEMI_03327	6.3e-105	-	-	-	G	-	-	-	Tripartite ATP-independent periplasmic transporters, DctQ component
LNEOGEMI_03328	8.79e-284	-	-	-	G	-	-	-	Tripartite ATP-independent periplasmic transporter, DctM component
LNEOGEMI_03329	0.0	uxaA	4.2.1.7	-	G	ko:K01685	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	Altronate
LNEOGEMI_03330	0.0	uxaB	1.1.1.58	-	G	ko:K00041	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	tagaturonate reductase activity
LNEOGEMI_03331	0.0	-	-	-	K	ko:K03491	-	ko00000,ko03000	transcriptional regulator, MtlR
LNEOGEMI_03332	4.35e-204	-	4.1.2.13	-	G	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-bisphosphate aldolase class-II
LNEOGEMI_03333	7.46e-101	-	2.7.1.202	-	G	ko:K02768	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LNEOGEMI_03334	6.25e-63	-	2.7.1.202	-	G	ko:K02769	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
LNEOGEMI_03335	7.44e-238	fruA2	-	-	G	ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	Phosphotransferase System
LNEOGEMI_03336	6.74e-119	ydaE	5.3.1.15	-	S	ko:K09988	ko00040,map00040	ko00000,ko00001,ko01000	Cupin 2, conserved barrel domain protein
LNEOGEMI_03338	0.0	gabR	-	-	K	ko:K00375	-	ko00000,ko03000	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
LNEOGEMI_03339	1.2e-203	pdxS	4.3.3.6	-	H	ko:K06215	ko00750,map00750	ko00000,ko00001,ko01000	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
LNEOGEMI_03340	3.33e-133	pdxT	4.3.3.6	-	H	ko:K08681	ko00750,map00750	ko00000,ko00001,ko01000	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
LNEOGEMI_03341	0.0	-	-	-	KT	-	-	-	Transcriptional regulator
LNEOGEMI_03342	1.7e-272	-	-	-	E	-	-	-	Acyclic terpene utilisation family protein AtuA
LNEOGEMI_03343	7.73e-280	-	-	-	C	ko:K03300	-	ko00000	Citrate transporter
LNEOGEMI_03344	0.0	mcpC	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis protein
LNEOGEMI_03345	7.21e-300	-	-	-	V	-	-	-	MatE
LNEOGEMI_03346	4.53e-53	-	-	-	-	-	-	-	-
LNEOGEMI_03347	2.69e-128	-	-	-	S	-	-	-	Tetratricopeptide repeat
LNEOGEMI_03348	4.1e-87	-	-	-	F	-	-	-	NUDIX domain
LNEOGEMI_03349	1.16e-214	-	-	-	K	-	-	-	Putative sugar-binding domain
LNEOGEMI_03350	2.59e-77	-	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
LNEOGEMI_03351	1.61e-229	-	2.7.1.198	-	G	ko:K02782,ko:K02783	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol sorbitol-specific transporter subunit IIB
LNEOGEMI_03352	3.57e-114	srlA	-	-	G	ko:K02783	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko02000	PTS system enzyme II sorbitol-specific factor
LNEOGEMI_03353	1.57e-88	-	-	-	K	-	-	-	Glucitol operon activator protein (GutM)
LNEOGEMI_03354	1.24e-299	-	-	-	E	-	-	-	SAF
LNEOGEMI_03355	2.31e-48	-	-	-	G	-	-	-	PTS HPr component phosphorylation site
LNEOGEMI_03356	3.19e-148	-	-	-	-	-	-	-	-
LNEOGEMI_03357	5.53e-119	-	-	-	S	-	-	-	VanZ like family
LNEOGEMI_03358	2.74e-101	yybA	-	-	K	-	-	-	transcriptional
LNEOGEMI_03359	7.8e-119	paiA	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
LNEOGEMI_03360	2.46e-221	ssuA	-	-	P	ko:K02051	-	ko00000,ko00002,ko02000	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components
LNEOGEMI_03361	1.01e-133	ssuC_2	-	-	P	ko:K02050,ko:K15554	ko00920,ko02010,map00920,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_03362	9.45e-198	ssuB	-	-	P	ko:K02049	-	ko00000,ko00002,ko02000	COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component
LNEOGEMI_03363	0.0	glcF	-	-	C	ko:K11473	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001	Glycolate oxidase
LNEOGEMI_03364	0.0	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	Glycolate oxidase subunit
LNEOGEMI_03365	1.51e-258	cdaR_1	-	-	KT	ko:K02647	-	ko00000,ko03000	regulator
LNEOGEMI_03366	9.79e-296	yxiO	-	-	S	ko:K06902	ko04138,map04138	ko00000,ko00001,ko02000,ko04131	COG2270 Permeases of the major facilitator superfamily
LNEOGEMI_03367	1.31e-181	uppP	3.6.1.27	-	V	ko:K06153	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
LNEOGEMI_03368	1.96e-226	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
LNEOGEMI_03369	1.57e-14	-	-	-	Q	ko:K02614	ko00360,map00360	ko00000,ko00001,ko01000	Thioesterase superfamily
LNEOGEMI_03370	1.3e-14	mazE	-	-	T	ko:K07172	-	ko00000,ko02048	SpoVT / AbrB like domain
LNEOGEMI_03371	1.07e-52	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
LNEOGEMI_03372	4.47e-31	topA2	5.99.1.2	-	L	ko:K03169	-	ko00000,ko01000,ko03032	Topoisomerase IA
LNEOGEMI_03374	0.0	-	6.2.1.1	-	I	ko:K01895	ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko01004	COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases
LNEOGEMI_03375	8.74e-67	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
LNEOGEMI_03376	3.56e-141	-	-	-	EGP	-	-	-	Uncharacterised MFS-type transporter YbfB
LNEOGEMI_03377	3.79e-13	-	-	-	-	-	-	-	-
LNEOGEMI_03378	3.69e-187	M1-276	-	-	-	-	-	-	-
LNEOGEMI_03379	9.6e-269	ysh1	-	-	J	-	-	-	Metallo-beta-lactamase superfamily
LNEOGEMI_03380	0.0	ftpA	-	-	P	ko:K02011	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_03381	6.47e-243	ftpB	-	-	P	ko:K02012	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
LNEOGEMI_03382	2.81e-233	phnT	3.6.3.30	-	P	ko:K02010	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
LNEOGEMI_03383	3.92e-206	-	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_03384	7.53e-73	-	-	-	S	-	-	-	Family of unknown function (DUF5367)
LNEOGEMI_03385	1.52e-129	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
LNEOGEMI_03387	2.68e-200	-	-	-	EG	-	-	-	EamA-like transporter family
LNEOGEMI_03388	2.79e-313	ywoF	-	-	P	-	-	-	Right handed beta helix region
LNEOGEMI_03389	3.71e-122	mutT	3.6.1.13, 3.6.1.55	-	L	ko:K01515,ko:K03574	ko00230,map00230	ko00000,ko00001,ko01000,ko03400	nUDIX hydrolase
LNEOGEMI_03390	1.43e-81	-	-	-	S	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
LNEOGEMI_03391	0.0	-	-	-	G	-	-	-	Bacterial extracellular solute-binding protein
LNEOGEMI_03392	1.43e-188	-	-	-	G	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_03393	8.08e-206	-	-	-	G	-	-	-	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_03394	1.75e-267	-	3.2.1.180	GH88	O	ko:K18581	-	ko00000,ko01000	Glycosyl Hydrolase Family 88
LNEOGEMI_03395	8.52e-212	-	-	-	K	-	-	-	AraC-like ligand binding domain
LNEOGEMI_03396	1.46e-284	-	-	-	S	-	-	-	Oxidoreductase family, C-terminal alpha/beta domain
LNEOGEMI_03397	1.93e-266	-	-	-	S	-	-	-	Oxidoreductase family, C-terminal alpha/beta domain
LNEOGEMI_03398	4.83e-129	-	-	-	K	-	-	-	AraC-like ligand binding domain
LNEOGEMI_03399	1.75e-179	inoDHR	-	-	G	-	-	-	Xylose isomerase-like TIM barrel
LNEOGEMI_03400	5.7e-198	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_03401	3.23e-219	ugpA7	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_03402	0.0	-	-	-	G	-	-	-	Bacterial extracellular solute-binding protein
LNEOGEMI_03403	7.02e-268	-	-	-	S	-	-	-	Oxidoreductase family, C-terminal alpha/beta domain
LNEOGEMI_03404	1.76e-177	-	-	-	G	-	-	-	Xylose isomerase-like TIM barrel
LNEOGEMI_03405	1.54e-217	-	-	-	K	-	-	-	Cupin domain
LNEOGEMI_03406	1.46e-240	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
LNEOGEMI_03407	1.64e-81	-	-	-	S	-	-	-	Protein of unknown function, DUF393
LNEOGEMI_03408	1.02e-184	yfhB	-	-	S	-	-	-	PhzF family
LNEOGEMI_03409	1.91e-132	-	-	-	V	-	-	-	Beta-lactamase
LNEOGEMI_03410	6.52e-115	plsY1	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
LNEOGEMI_03411	0.0	-	-	-	E	-	-	-	Aminotransferase class-V
LNEOGEMI_03412	0.0	-	-	-	M	-	-	-	Sulfatase
LNEOGEMI_03413	1.67e-86	-	-	-	E	ko:K07032	-	ko00000	lactoylglutathione lyase activity
LNEOGEMI_03414	9.73e-193	-	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	COG3103 SH3 domain protein
LNEOGEMI_03415	2.07e-139	-	-	-	K	-	-	-	LysR substrate binding domain
LNEOGEMI_03416	2.12e-156	-	-	-	S	-	-	-	Sulfatase-modifying factor enzyme 1
LNEOGEMI_03417	3.44e-130	-	5.1.3.9	-	G	ko:K01788	ko00520,map00520	ko00000,ko00001,ko01000	Putative N-acetylmannosamine-6-phosphate epimerase
LNEOGEMI_03418	8.69e-61	ptbA	2.7.1.199	-	G	ko:K02777,ko:K20116,ko:K20117,ko:K20118	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, glucose subfamily, IIA
LNEOGEMI_03419	9.93e-259	-	-	-	P	-	-	-	Sulfatase
LNEOGEMI_03420	9.08e-294	ptsG	2.7.1.199, 2.7.1.208	-	G	ko:K02777,ko:K02778,ko:K02779,ko:K02790,ko:K02791	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
LNEOGEMI_03421	2.17e-112	-	-	-	K	ko:K11922	-	ko00000,ko03000	Regulates the succiny-lCoA synthetase operon
LNEOGEMI_03422	2.01e-103	-	-	-	S	ko:K07090	-	ko00000	Sulfite exporter TauE/SafE
LNEOGEMI_03423	3.26e-200	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
LNEOGEMI_03424	1.34e-40	yisX	-	-	S	-	-	-	Pentapeptide repeats (9 copies)
LNEOGEMI_03425	3.03e-190	araQ	-	-	P	ko:K10190,ko:K10242	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PFAM binding-protein-dependent transport systems inner membrane component
LNEOGEMI_03426	9.42e-203	-	-	-	G	ko:K10189	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_03427	3.91e-305	-	-	-	G	ko:K10188	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
LNEOGEMI_03428	3.06e-64	-	-	-	S	-	-	-	Branched-chain amino acid transport protein (AzlD)
LNEOGEMI_03429	4.95e-150	-	-	-	E	-	-	-	AzlC protein
LNEOGEMI_03430	1.19e-122	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
LNEOGEMI_03431	1.03e-112	M1-753	-	-	M	-	-	-	FR47-like protein
LNEOGEMI_03433	2.15e-48	ydaS	-	-	S	-	-	-	membrane
LNEOGEMI_03434	4.24e-116	ywmF	-	-	S	-	-	-	Peptidase M50
LNEOGEMI_03435	1.24e-298	-	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
LNEOGEMI_03436	1.9e-147	ypgQ	-	-	S	ko:K06950	-	ko00000	phosphohydrolase
LNEOGEMI_03437	3.9e-35	-	-	-	-	-	-	-	-
LNEOGEMI_03438	0.0	apc3	-	-	EQ	-	-	-	Hydantoinase/oxoprolinase
LNEOGEMI_03439	1.2e-260	-	-	-	S	ko:K09703	-	ko00000	Protein of unknown function (DUF917)
LNEOGEMI_03440	1.73e-275	-	-	-	F	ko:K10974	-	ko00000,ko02000	cytosine purines uracil thiamine allantoin
LNEOGEMI_03441	1.7e-132	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
LNEOGEMI_03442	2.16e-172	-	-	-	K	-	-	-	acetyltransferase
LNEOGEMI_03443	4.01e-105	-	-	-	S	ko:K06385	-	ko00000	Stage II sporulation protein P (SpoIIP)
LNEOGEMI_03444	1.81e-79	-	2.7.11.1	-	KLT	ko:K08884	-	ko00000,ko01000,ko01001	Protein kinase domain
LNEOGEMI_03445	4.93e-107	-	2.7.11.1	-	KLT	ko:K08884	-	ko00000,ko01000,ko01001	Protein kinase domain
LNEOGEMI_03446	5.62e-75	-	-	-	FG	ko:K02503	-	ko00000,ko04147	HIT domain
LNEOGEMI_03447	4.63e-209	ydhJ	-	-	S	ko:K06885	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
LNEOGEMI_03448	1.58e-16	-	-	-	S	ko:K06361,ko:K06365,ko:K06366	ko02024,map02024	ko00000,ko00001,ko01000	Histidine kinase
LNEOGEMI_03449	3.13e-16	-	-	-	S	ko:K06361,ko:K06365,ko:K06366	ko02024,map02024	ko00000,ko00001,ko01000	Histidine kinase
LNEOGEMI_03450	1.56e-114	-	-	-	-	-	-	-	-
LNEOGEMI_03452	1.62e-228	-	-	-	S	ko:K06889	-	ko00000	COG1073 Hydrolases of the alpha beta superfamily
LNEOGEMI_03453	3.54e-295	-	-	-	S	-	-	-	protein conserved in bacteria
LNEOGEMI_03454	0.0	-	3.5.4.28, 3.5.4.31	-	F	ko:K12960	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine
LNEOGEMI_03455	5.3e-283	-	3.5.1.6, 3.5.1.87	-	E	ko:K06016	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases
LNEOGEMI_03456	8.16e-306	hutI	3.5.2.7	-	Q	ko:K01468	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Imidazolone-5-propionate hydrolase
LNEOGEMI_03457	0.0	hutU	4.2.1.49	-	E	ko:K01712	ko00340,ko01100,map00340,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
LNEOGEMI_03458	0.0	-	-	-	T	-	-	-	COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
LNEOGEMI_03459	1.85e-270	-	-	-	G	-	-	-	Transmembrane secretion effector
LNEOGEMI_03460	8.66e-234	desK	2.7.13.3	-	T	ko:K07778	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
LNEOGEMI_03461	1.84e-133	desR	-	-	K	ko:K07693	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	helix_turn_helix, Lux Regulon
LNEOGEMI_03462	5.63e-145	-	-	-	-	-	-	-	-
LNEOGEMI_03463	1.76e-196	-	-	-	K	ko:K03488	-	ko00000,ko03000	antiterminator
LNEOGEMI_03464	0.0	nagE	2.7.1.193, 2.7.1.199	-	G	ko:K02802,ko:K02803,ko:K02804,ko:K20116,ko:K20117,ko:K20118	ko00010,ko00520,ko02060,map00010,map00520,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG1263 Phosphotransferase system IIC components, glucose maltose N-acetylglucosamine-specific
LNEOGEMI_03465	2.47e-222	-	3.4.17.13	-	V	ko:K01297	-	ko00000,ko01000,ko01002,ko01011	proteins, homologs of microcin C7 resistance protein MccF
LNEOGEMI_03466	1.25e-117	ydhK	-	-	M	-	-	-	Protein of unknown function (DUF1541)
LNEOGEMI_03467	1.02e-89	-	-	-	-	-	-	-	-
LNEOGEMI_03468	0.0	expZ	-	-	S	ko:K18231	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ABC transporter
LNEOGEMI_03469	8.17e-267	gatD	1.1.1.14, 1.1.1.251	-	C	ko:K00008,ko:K00094	ko00040,ko00051,ko00052,ko01100,map00040,map00051,map00052,map01100	ko00000,ko00001,ko00002,ko01000	Alcohol dehydrogenase GroES-like domain
LNEOGEMI_03470	1.15e-29	-	-	-	-	-	-	-	-
LNEOGEMI_03471	4.25e-248	gutB	1.1.1.14	-	E	ko:K00008	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko00002,ko01000	COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases
LNEOGEMI_03472	6.01e-287	gatC	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	COG3775 Phosphotransferase system, galactitol-specific IIC component
LNEOGEMI_03473	2.12e-56	-	2.7.1.200	-	G	ko:K02774	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
LNEOGEMI_03474	3.42e-96	-	2.7.1.200	-	GT	ko:K02773	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LNEOGEMI_03475	0.0	-	-	-	GKT	-	-	-	COG3711 Transcriptional antiterminator
LNEOGEMI_03476	0.0	zosA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	COG2217 Cation transport ATPase
LNEOGEMI_03477	1.91e-237	-	-	-	-	-	-	-	-
LNEOGEMI_03478	1.49e-133	hxlA	4.1.2.43	-	G	ko:K08093	ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	3-hexulose-6-phosphate synthase
LNEOGEMI_03479	5.61e-224	kdgK	2.7.1.45	-	G	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	COG0524 Sugar kinases, ribokinase family
LNEOGEMI_03480	8.06e-139	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LNEOGEMI_03481	4.58e-116	hxlB	5.3.1.27	-	M	ko:K08094	ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	SIS domain
LNEOGEMI_03482	2.34e-260	siaT_3	-	-	G	-	-	-	COG1593 TRAP-type C4-dicarboxylate transport system, large permease component
LNEOGEMI_03483	1.6e-109	-	-	-	G	-	-	-	Tripartite ATP-independent periplasmic transporters, DctQ component
LNEOGEMI_03484	1.22e-227	-	-	-	G	-	-	-	Bacterial extracellular solute-binding protein, family 7
LNEOGEMI_03485	8.62e-228	regR	-	-	K	ko:K02525	-	ko00000,ko03000	transcriptional
LNEOGEMI_03486	4.02e-69	-	-	-	K	ko:K10947	-	ko00000,ko03000	Transcriptional regulator PadR-like family
LNEOGEMI_03487	3.82e-95	-	-	-	-	-	-	-	-
LNEOGEMI_03488	2.95e-99	-	-	-	-	-	-	-	-
LNEOGEMI_03489	1.09e-252	ysdC_3	3.2.1.4	GH5,GH9	G	ko:K01179	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	M42 glutamyl aminopeptidase
LNEOGEMI_03490	6.91e-55	M1-485	-	-	S	-	-	-	Membrane
LNEOGEMI_03491	6.94e-70	yvdC	-	-	S	-	-	-	MazG nucleotide pyrophosphohydrolase domain
LNEOGEMI_03492	2.24e-227	tagH	3.6.3.40	-	GM	ko:K09693	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
LNEOGEMI_03493	7.71e-186	tagG	-	-	GM	ko:K09692	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transport permease protein
LNEOGEMI_03494	4.08e-176	-	-	-	S	ko:K06976	-	ko00000	GNAT acetyltransferase
LNEOGEMI_03495	0.0	-	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	COG0474 Cation transport ATPase
LNEOGEMI_03496	0.0	yxiA	3.2.1.99	GH43	G	ko:K06113	-	ko00000,ko01000	Belongs to the glycosyl hydrolase 43 family
LNEOGEMI_03498	0.0	xsa	3.2.1.55	GH51	G	ko:K01209	ko00520,map00520	ko00000,ko00001,ko01000	Alpha-L-arabinofuranosidase C-terminus
LNEOGEMI_03499	9.64e-169	modA	-	-	P	ko:K02020	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG0725 ABC-type molybdate transport system, periplasmic component
LNEOGEMI_03500	4.94e-141	modB	-	-	P	ko:K02018	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG4149 ABC-type molybdate transport system, permease component
LNEOGEMI_03501	5.44e-139	vraR	-	-	KT	ko:K07694,ko:K11618	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
LNEOGEMI_03502	6.56e-233	vraS	2.7.13.3	-	T	ko:K07681,ko:K11617	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
LNEOGEMI_03503	4.96e-159	yvqF	-	-	S	ko:K11622	ko02020,map02020	ko00000,ko00001	Cell wall-active antibiotics response 4TMS YvqF
LNEOGEMI_03504	1.08e-131	-	-	-	-	-	-	-	-
LNEOGEMI_03505	3.99e-07	liaI	-	-	-	ko:K11619	ko02020,map02020	ko00000,ko00001,ko00002	-
LNEOGEMI_03506	9.24e-146	-	-	-	S	-	-	-	Cupin
LNEOGEMI_03507	0.0	-	-	-	M	-	-	-	glycoside hydrolase family 81
LNEOGEMI_03508	1.72e-243	cytR	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
LNEOGEMI_03509	3e-185	-	-	-	P	ko:K10242	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PFAM binding-protein-dependent transport systems inner membrane component
LNEOGEMI_03510	1.53e-199	araP	-	-	P	ko:K10189,ko:K10241,ko:K17235	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PFAM binding-protein-dependent transport systems inner membrane component
LNEOGEMI_03511	9.73e-252	-	-	-	G	ko:K10240	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	PFAM extracellular solute-binding protein family 1
LNEOGEMI_03512	4.41e-155	glpF	-	-	G	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
LNEOGEMI_03513	0.0	glpK	2.7.1.30	-	C	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
LNEOGEMI_03514	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LNEOGEMI_03515	7.97e-294	nrgA	-	-	P	ko:K03320	-	ko00000,ko02000	Ammonium transporter
LNEOGEMI_03516	8.8e-214	-	-	-	T	ko:K07182	-	ko00000	Putative nucleotidyltransferase substrate binding domain
LNEOGEMI_03517	1.24e-170	polC1	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases
LNEOGEMI_03518	1.79e-61	-	-	-	S	-	-	-	Family of unknown function (DUF5327)
LNEOGEMI_03519	0.0	putP	-	-	E	ko:K11928	-	ko00000,ko02000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LNEOGEMI_03520	1.58e-140	ykwB	-	-	K	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
LNEOGEMI_03521	4.91e-78	ywdK	-	-	S	-	-	-	small membrane protein
LNEOGEMI_03522	5.01e-106	gerQ	-	-	S	ko:K06305	-	ko00000	Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA
LNEOGEMI_03523	6.58e-101	cwlJ	3.5.1.28	-	M	ko:K01449	-	ko00000,ko01000	Cell wall
LNEOGEMI_03524	7.33e-163	-	-	-	-	-	-	-	-
LNEOGEMI_03525	9.31e-84	-	-	-	K	ko:K07979	-	ko00000,ko03000	helix_turn_helix gluconate operon transcriptional repressor
LNEOGEMI_03526	1.46e-207	natA1	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
LNEOGEMI_03527	6.98e-210	yhaQ	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
LNEOGEMI_03528	3.05e-245	yhaP	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	COG1668 ABC-type Na efflux pump, permease component
LNEOGEMI_03529	3.16e-64	-	-	-	-	-	-	-	-
LNEOGEMI_03530	5.82e-180	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
LNEOGEMI_03531	2.61e-184	ywfI	-	-	C	ko:K00435	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko01000	May function as heme-dependent peroxidase
LNEOGEMI_03532	4.29e-180	-	5.3.3.18	-	I	ko:K15866	ko00360,ko01120,map00360,map01120	ko00000,ko00001,ko01000	Belongs to the enoyl-CoA hydratase isomerase family
LNEOGEMI_03533	4.3e-231	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	In Salmonella this enzyme is required for ethanolamine catabolism
LNEOGEMI_03534	7.65e-185	lipL	2.3.1.200, 2.3.1.204	-	H	ko:K16869,ko:K18821	-	ko00000,ko01000	Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes
LNEOGEMI_03535	9.03e-264	gltP	-	-	C	-	-	-	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
LNEOGEMI_03536	0.0	ywfO	-	-	S	ko:K06885	-	ko00000	COG1078 HD superfamily phosphohydrolases
LNEOGEMI_03537	1.3e-115	ywgA	-	-	-	ko:K09388	-	ko00000	-
LNEOGEMI_03539	4.6e-56	cotF	-	-	M	ko:K06329	-	ko00000	Spore coat protein
LNEOGEMI_03540	6.92e-37	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	4-oxalocrotonate tautomerase
LNEOGEMI_03541	1.97e-159	-	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	COG3764 Sortase (surface protein transpeptidase)
LNEOGEMI_03542	1.39e-257	-	-	-	F	-	-	-	S-adenosylhomocysteine deaminase activity
LNEOGEMI_03543	3.38e-128	ywhD	-	-	S	-	-	-	YwhD family
LNEOGEMI_03544	0.0	-	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
LNEOGEMI_03545	1.15e-199	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
LNEOGEMI_03546	0.0	pbpG	2.4.1.129, 3.4.16.4	GT51	M	ko:K21464	ko00550,map00550	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
LNEOGEMI_03547	3.6e-204	speE	2.5.1.16	-	E	ko:K00797	ko00270,ko00330,ko00410,ko00480,ko01100,map00270,map00330,map00410,map00480,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
LNEOGEMI_03548	2.02e-214	speB	3.5.3.11	-	E	ko:K01480	ko00330,ko01100,map00330,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the arginase family
LNEOGEMI_03549	1.89e-100	ywiB	-	-	S	-	-	-	protein conserved in bacteria
LNEOGEMI_03550	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
LNEOGEMI_03551	6.53e-97	-	-	-	S	ko:K09793	-	ko00000	protein conserved in bacteria
LNEOGEMI_03552	6.41e-28	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
LNEOGEMI_03553	9.07e-13	-	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
LNEOGEMI_03554	1.36e-243	bdhA	1.1.1.264, 1.1.1.303, 1.1.1.4	-	E	ko:K00004,ko:K00098	ko00650,map00650	ko00000,ko00001,ko01000	Dehydrogenase
LNEOGEMI_03555	6.66e-135	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
LNEOGEMI_03556	0.0	gsiB_3	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0747 ABC-type dipeptide transport system, periplasmic component
LNEOGEMI_03557	1.22e-09	-	-	-	S	-	-	-	Protein of unknown function (Tiny_TM_bacill)
LNEOGEMI_03559	1.62e-11	-	-	-	-	-	-	-	-
LNEOGEMI_03566	5.59e-128	sigW	-	-	K	ko:K03088	-	ko00000,ko03021	Belongs to the sigma-70 factor family. ECF subfamily
LNEOGEMI_03567	2.31e-155	rsiW	-	-	K	-	-	-	Is the anti-sigma factor for SigW. The presence of RsiW leads to the inactivation of SigW, and its proteolytic destruction to sigma-W activation
LNEOGEMI_03568	3.79e-185	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
LNEOGEMI_03569	4.66e-278	ybbR	-	-	S	-	-	-	protein conserved in bacteria
LNEOGEMI_03570	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LNEOGEMI_03572	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
LNEOGEMI_03573	1.99e-196	ybfI	-	-	K	-	-	-	AraC-like ligand binding domain
LNEOGEMI_03574	8.61e-223	-	-	-	E	ko:K00318	ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130	ko00000,ko00001,ko01000	Proline dehydrogenase
LNEOGEMI_03575	3.94e-250	-	-	-	V	-	-	-	Beta-lactamase
LNEOGEMI_03576	2.42e-40	-	-	-	S	-	-	-	Aminoglycoside phosphotransferase
LNEOGEMI_03577	1.08e-219	-	-	-	S	-	-	-	Aminoglycoside phosphotransferase
LNEOGEMI_03578	1.43e-96	-	-	-	K	-	-	-	SpoVT / AbrB like domain
LNEOGEMI_03579	7.47e-280	yjiC	-	-	CG	-	-	-	COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase
LNEOGEMI_03580	9e-181	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
LNEOGEMI_03581	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
LNEOGEMI_03582	5.03e-156	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
LNEOGEMI_03583	1.07e-238	-	-	-	T	-	-	-	Histidine kinase-like ATPases
LNEOGEMI_03584	4.26e-139	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
LNEOGEMI_03585	1.65e-286	-	-	-	EGP	-	-	-	Transmembrane secretion effector
LNEOGEMI_03586	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
LNEOGEMI_03587	8.89e-170	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
LNEOGEMI_03588	3.47e-73	ytrA	-	-	K	ko:K07979	-	ko00000,ko03000	GntR family transcriptional regulator
LNEOGEMI_03589	3.17e-200	CcmA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
LNEOGEMI_03590	9.2e-118	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
LNEOGEMI_03591	2.29e-224	-	6.1.1.17	-	J	ko:K01885	ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120	ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LNEOGEMI_03592	7.93e-196	penP	3.5.2.6	-	V	ko:K17836,ko:K18766	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	beta-lactamase
LNEOGEMI_03593	0.0	mecR1	-	-	KTV	ko:K02172,ko:K02547	ko01501,map01501	ko00000,ko00001,ko00002,ko01002,ko01504	BlaR1 peptidase M56
LNEOGEMI_03594	2.61e-83	blaI	-	-	K	ko:K02171,ko:K02546	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Penicillinase repressor
LNEOGEMI_03595	1.01e-180	-	-	-	H	ko:K17882	-	ko00000,ko01000,ko01504	KNTase C-terminal domain
LNEOGEMI_03596	9.1e-83	-	-	-	K	ko:K21903	-	ko00000,ko03000	transcriptional
LNEOGEMI_03597	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	COG2217 Cation transport ATPase
LNEOGEMI_03598	3.92e-246	trkA	-	-	P	ko:K07222	-	ko00000	Oxidoreductase
LNEOGEMI_03599	6.38e-108	-	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
LNEOGEMI_03600	1.1e-103	-	-	-	-	-	-	-	-
LNEOGEMI_03601	5.94e-175	-	-	-	Q	-	-	-	ubiE/COQ5 methyltransferase family
LNEOGEMI_03602	8.67e-230	-	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
LNEOGEMI_03603	4.76e-146	-	-	-	Q	-	-	-	SAM-dependent methyltransferase
LNEOGEMI_03604	2.15e-180	-	-	-	EG	-	-	-	EamA-like transporter family
LNEOGEMI_03605	8.11e-167	-	-	-	K	ko:K18907	-	ko00000,ko00002,ko01504,ko03000	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
LNEOGEMI_03606	3.88e-136	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
LNEOGEMI_03607	5.53e-84	-	-	-	-	-	-	-	-
LNEOGEMI_03608	2.26e-89	-	-	-	S	-	-	-	Protein of unknown function (DUF2512)
LNEOGEMI_03609	4.73e-146	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
LNEOGEMI_03610	3.68e-107	-	2.3.1.128	-	J	ko:K03789,ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
LNEOGEMI_03611	0.0	siaT_4	-	-	S	-	-	-	Tripartite ATP-independent periplasmic transporter, DctM component
LNEOGEMI_03612	4.74e-67	-	-	-	S	-	-	-	Domain of unknown function (DUF1850)
LNEOGEMI_03613	1.01e-151	-	-	-	S	ko:K07080	-	ko00000	NMT1-like family
LNEOGEMI_03614	0.0	-	-	-	M	ko:K05020	-	ko00000,ko02000	Belongs to the BCCT transporter (TC 2.A.15) family
LNEOGEMI_03615	5.23e-151	ktrA	-	-	P	ko:K03499	-	ko00000,ko02000	COG0569 K transport systems, NAD-binding component
LNEOGEMI_03616	5.54e-210	ycgS	-	-	I	-	-	-	alpha/beta hydrolase fold
LNEOGEMI_03617	5.8e-271	yutK	-	-	F	ko:K03317	-	ko00000	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LNEOGEMI_03618	1.52e-125	flaR	-	-	F	-	-	-	topology modulation protein
LNEOGEMI_03620	4.11e-11	-	-	-	S	ko:K06327	-	ko00000	Inner spore coat protein D
LNEOGEMI_03621	7.51e-93	-	-	-	-	-	-	-	-
LNEOGEMI_03622	0.0	-	-	-	-	-	-	-	-
LNEOGEMI_03623	6.79e-68	-	-	-	-	-	-	-	-
LNEOGEMI_03624	1.26e-243	uxuA	4.2.1.8	-	G	ko:K01686	ko00040,ko01100,map00040,map01100	ko00000,ko00001,ko00002,ko01000	mannonate dehydratase activity
LNEOGEMI_03625	6.14e-235	-	-	-	S	-	-	-	Tripartite tricarboxylate transporter family receptor
LNEOGEMI_03626	0.0	-	-	-	S	ko:K07793	ko02020,map02020	ko00000,ko00001,ko02000	Tripartite tricarboxylate transporter TctA family
LNEOGEMI_03627	1.48e-103	-	-	-	S	-	-	-	Tripartite tricarboxylate transporter TctB family
LNEOGEMI_03628	0.0	ycbD	-	-	C	ko:K22187	ko00040,map00040	ko00000,ko00001,ko01000	Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
LNEOGEMI_03629	7.61e-217	ycbC	4.2.1.41	-	EM	ko:K01707	ko00053,ko01100,map00053,map01100	ko00000,ko00001,ko01000	5-dehydro-4-deoxyglucarate dehydratase activity
LNEOGEMI_03630	4.09e-154	ycbG	-	-	K	ko:K05799	-	ko00000,ko03000	FCD
LNEOGEMI_03631	3.89e-147	-	-	-	K	ko:K05799	-	ko00000,ko03000	FCD
LNEOGEMI_03632	6.79e-257	yycB1	-	-	P	ko:K03449	-	ko00000,ko02000	COG2807 Cyanate permease
LNEOGEMI_03633	4.14e-81	-	-	-	F	-	-	-	Cytidine and deoxycytidylate deaminase zinc-binding region
LNEOGEMI_03634	9.96e-95	-	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_03635	6.96e-184	-	3.4.16.4	-	V	ko:K01286	-	ko00000,ko01000	Beta-lactamase
LNEOGEMI_03636	8.46e-160	yybG	-	-	S	-	-	-	Pentapeptide repeat-containing protein
LNEOGEMI_03637	1.76e-58	ydhM	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
LNEOGEMI_03638	3.41e-298	celB	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LNEOGEMI_03639	2.1e-63	celC	2.7.1.196, 2.7.1.205, 2.7.1.207	-	G	ko:K02759,ko:K02786	ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
LNEOGEMI_03640	0.0	gmuD	3.2.1.21, 3.2.1.86	GT1	G	ko:K01223,ko:K05350	ko00010,ko00460,ko00500,ko00940,ko01100,ko01110,map00010,map00460,map00500,map00940,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
LNEOGEMI_03641	0.0	licR	-	-	GKT	ko:K03491	-	ko00000,ko03000	Mga helix-turn-helix domain
LNEOGEMI_03642	1.61e-117	-	-	-	K	-	-	-	Bacterial transcription activator, effector binding domain
LNEOGEMI_03643	4.78e-110	-	-	-	-	-	-	-	-
LNEOGEMI_03644	9.33e-24	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
LNEOGEMI_03645	5.96e-126	-	-	-	M	-	-	-	3D domain
LNEOGEMI_03646	4.61e-293	-	-	-	JM	-	-	-	Bacterial transferase hexapeptide (six repeats)
LNEOGEMI_03647	5.43e-166	frlR3	-	-	K	ko:K03710	-	ko00000,ko03000	transcriptional
LNEOGEMI_03648	3.29e-181	-	-	-	S	-	-	-	carbohydrate derivative metabolic process
LNEOGEMI_03650	0.0	-	-	-	I	-	-	-	radical SAM domain protein
LNEOGEMI_03651	0.0	-	1.3.98.3	-	H	ko:K02495	ko00860,ko01100,ko01110,map00860,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of porphyrin-containing compound
LNEOGEMI_03653	1.19e-177	yafE	-	-	Q	-	-	-	methyltransferase
LNEOGEMI_03655	1.75e-115	-	-	-	S	-	-	-	Uncharacterised protein family UPF0066
LNEOGEMI_03656	5.96e-284	-	-	-	EGP	-	-	-	COG0477 Permeases of the major facilitator superfamily
LNEOGEMI_03657	7.64e-131	-	-	-	J	-	-	-	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LNEOGEMI_03658	1.6e-220	-	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	GDP-mannose 4,6 dehydratase
LNEOGEMI_03659	8.25e-163	-	-	-	M	-	-	-	Glycosyl transferases group 1
LNEOGEMI_03660	6.91e-129	-	-	-	-	-	-	-	-
LNEOGEMI_03661	4.55e-130	-	-	GT2,GT4	M	ko:K20444	-	ko00000,ko01000,ko01005,ko02000	transferase activity, transferring glycosyl groups
LNEOGEMI_03662	9.09e-152	-	-	-	M	-	-	-	transferase activity, transferring glycosyl groups
LNEOGEMI_03663	7.31e-147	-	-	-	M	-	-	-	Glycosyl transferase family 2
LNEOGEMI_03664	4.36e-301	-	1.1.1.136	-	M	ko:K13015	ko00520,map00520	ko00000,ko00001,ko01000,ko01005	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
LNEOGEMI_03665	1.02e-84	ybbJ	-	-	J	-	-	-	acetyltransferase
LNEOGEMI_03666	8.15e-250	-	-	-	M	-	-	-	Glycosyltransferase like family 2
LNEOGEMI_03667	1.07e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2642)
LNEOGEMI_03668	2.58e-33	-	-	-	-	-	-	-	-
LNEOGEMI_03669	4.06e-306	VCP	-	-	O	-	-	-	AAA domain (dynein-related subfamily)
LNEOGEMI_03670	6.24e-119	ycsK	-	-	E	-	-	-	anatomical structure formation involved in morphogenesis
LNEOGEMI_03671	2.4e-155	-	-	-	K	-	-	-	helix_turn_helix isocitrate lyase regulation
LNEOGEMI_03672	1.06e-207	kdgK	2.7.1.45	-	G	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	COG0524 Sugar kinases, ribokinase family
LNEOGEMI_03673	1.62e-130	-	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	KDPG and KHG aldolase
LNEOGEMI_03674	8.16e-289	dgoD	4.2.1.6	-	M	ko:K01684	ko00052,ko01100,ko01120,map00052,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the mandelate racemase muconate lactonizing enzyme family
LNEOGEMI_03675	8.06e-247	gntU	-	-	EG	ko:K03299,ko:K06156	-	ko00000,ko02000	COG2610 H gluconate symporter and related permeases
LNEOGEMI_03676	1.99e-197	-	-	-	S	-	-	-	Metallo-beta-lactamase superfamily
LNEOGEMI_03677	1.9e-113	-	-	-	S	-	-	-	Predicted membrane protein (DUF2243)
LNEOGEMI_03678	5.69e-158	-	-	-	S	ko:K02351	-	ko00000	Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG)
LNEOGEMI_03679	2.68e-293	-	2.7.13.3	-	T	ko:K02484	-	ko00000,ko01000,ko01001,ko02022	COG0642 Signal transduction histidine kinase
LNEOGEMI_03680	9.77e-160	-	-	-	T	-	-	-	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LNEOGEMI_03681	1.95e-213	-	-	-	K	-	-	-	DJ-1/PfpI family
LNEOGEMI_03682	8.33e-140	-	-	-	S	-	-	-	Predicted membrane protein (DUF2306)
LNEOGEMI_03683	2.05e-255	yurR	1.4.5.1	-	E	ko:K00285	ko00360,map00360	ko00000,ko00001,ko01000	COG0665 Glycine D-amino acid oxidases (deaminating)
LNEOGEMI_03684	4.02e-94	-	-	-	S	-	-	-	VanZ like family
LNEOGEMI_03685	1.92e-141	wrbA	1.6.5.2	-	S	ko:K03809	ko00130,ko01110,map00130,map01110	ko00000,ko00001,ko01000	Belongs to the WrbA family
LNEOGEMI_03687	1.78e-105	-	-	-	K	-	-	-	Acetyltransferase (GNAT) family
LNEOGEMI_03688	5.94e-164	aroD	4.2.1.10	-	E	ko:K03785	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
LNEOGEMI_03689	0.0	-	-	-	V	-	-	-	SNF2 family N-terminal domain
LNEOGEMI_03692	0.0	-	-	-	S	-	-	-	LXG domain of WXG superfamily
LNEOGEMI_03693	1.43e-112	-	-	-	-	-	-	-	-
LNEOGEMI_03694	2.91e-259	dhaT	1.1.1.202	-	C	ko:K00086	ko00561,ko00640,map00561,map00640	ko00000,ko00001,ko01000	alcohol dehydrogenase
LNEOGEMI_03695	3.81e-17	-	-	-	-	-	-	-	-
LNEOGEMI_03696	0.0	cckA	2.7.13.3	-	T	ko:K02482	-	ko00000,ko01000,ko01001,ko02022	GAF domain
LNEOGEMI_03697	0.0	-	-	-	T	ko:K02481	-	ko00000,ko02022	Sigma-54 interaction domain
LNEOGEMI_03698	2.39e-253	adhA	1.1.1.1	-	C	ko:K13953	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
LNEOGEMI_03699	0.0	dhaS	1.2.1.3, 1.2.1.39	-	C	ko:K00128,ko:K00146	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00360,ko00380,ko00410,ko00561,ko00620,ko00625,ko00643,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00360,map00380,map00410,map00561,map00620,map00625,map00643,map00903,map00981,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
LNEOGEMI_03700	1.09e-224	-	-	-	S	ko:K06885	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
LNEOGEMI_03702	0.0	yaaO	-	-	E	-	-	-	Orn Lys Arg decarboxylase
LNEOGEMI_03703	6.14e-147	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
LNEOGEMI_03704	9.77e-71	yaaQ	-	-	S	-	-	-	protein conserved in bacteria
LNEOGEMI_03705	3.03e-233	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
LNEOGEMI_03706	3.66e-188	yaaT	-	-	S	-	-	-	stage 0 sporulation protein
LNEOGEMI_03707	1.21e-59	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
LNEOGEMI_03708	1.28e-172	yabB	2.1.1.223	-	S	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Conserved hypothetical protein 95
LNEOGEMI_03709	9.86e-54	yazA	-	-	L	ko:K07461	-	ko00000	endonuclease containing a URI domain
LNEOGEMI_03710	1.29e-199	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LNEOGEMI_03711	3.04e-58	abrB	-	-	K	ko:K06284	-	ko00000,ko03000	COG2002 Regulators of stationary sporulation gene expression
LNEOGEMI_03712	2.76e-221	-	-	-	S	-	-	-	NurA
LNEOGEMI_03713	0.0	-	-	-	S	ko:K06915	-	ko00000	Domain of unknown function DUF87
LNEOGEMI_03714	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LNEOGEMI_03715	4.5e-100	-	-	-	K	-	-	-	DNA-binding transcription factor activity
LNEOGEMI_03716	6.47e-235	pelB	4.2.2.2	-	G	ko:K01728	ko00040,ko02024,map00040,map02024	ko00000,ko00001,ko01000	Amb_all
LNEOGEMI_03718	0.0	-	-	-	S	-	-	-	ABC transporter
LNEOGEMI_03719	4.13e-147	-	-	-	T	-	-	-	protein histidine kinase activity
LNEOGEMI_03720	0.0	-	-	-	S	-	-	-	Protein of unknown function (DUF3298)
LNEOGEMI_03721	1.06e-183	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD
LNEOGEMI_03722	2.1e-266	yabE	-	-	T	-	-	-	protein conserved in bacteria
LNEOGEMI_03723	8.15e-136	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
LNEOGEMI_03724	2.8e-200	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
LNEOGEMI_03725	1.46e-207	yabG	-	-	S	ko:K06436	-	ko00000	peptidase
LNEOGEMI_03726	4.02e-53	veg	-	-	S	-	-	-	protein conserved in bacteria
LNEOGEMI_03727	1.8e-34	sspF	-	-	S	ko:K06423	-	ko00000	DNA topological change
LNEOGEMI_03728	4.54e-209	ispE	2.7.1.148	-	I	ko:K00919,ko:K16924	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
LNEOGEMI_03729	1.56e-190	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
LNEOGEMI_03730	4.06e-81	yabJ	3.5.99.10	-	J	ko:K09022	-	ko00000,ko01000	translation initiation inhibitor, yjgF family
LNEOGEMI_03731	2.26e-64	spoVG	-	-	D	ko:K06412	-	ko00000	Essential for sporulation. Interferes with or is a negative regulator of the pathway leading to asymmetric septation
LNEOGEMI_03733	0.0	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
LNEOGEMI_03734	7.02e-218	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LNEOGEMI_03735	1.79e-137	ctc	-	-	J	ko:K02897	ko03010,map03010	ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
LNEOGEMI_03736	8.63e-131	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
LNEOGEMI_03737	7.35e-53	yabK	-	-	S	-	-	-	Peptide ABC transporter permease
LNEOGEMI_03738	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LNEOGEMI_03739	1.89e-122	spoVT	-	-	K	ko:K04769	-	ko00000,ko03000	stage V sporulation protein
LNEOGEMI_03740	4.55e-134	-	-	-	S	-	-	-	Yip1 domain
LNEOGEMI_03741	1.43e-252	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LNEOGEMI_03742	1.63e-114	-	-	-	S	-	-	-	Yip1 domain
LNEOGEMI_03743	0.0	yabM	-	-	S	ko:K03328	-	ko00000	COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
LNEOGEMI_03744	0.0	yabN	3.6.1.66	-	S	ko:K02428,ko:K02499	ko00230,map00230	ko00000,ko00001,ko01000,ko03036	COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like
LNEOGEMI_03745	1.21e-35	yabO	-	-	J	-	-	-	COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
LNEOGEMI_03746	7.39e-147	yhcW	-	-	S	ko:K07025	-	ko00000	hydrolase
LNEOGEMI_03747	1.43e-56	-	-	-	-	-	-	-	-
LNEOGEMI_03750	1.64e-98	-	-	-	-	-	-	-	-
LNEOGEMI_03752	2.09e-65	-	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_03753	4.03e-188	-	-	-	IQ	-	-	-	Belongs to the short-chain dehydrogenases reductases (SDR) family
LNEOGEMI_03754	1.83e-127	-	-	-	-	-	-	-	-
LNEOGEMI_03755	0.0	-	-	-	-	-	-	-	-
LNEOGEMI_03756	4.51e-70	-	-	-	-	-	-	-	-
LNEOGEMI_03757	4.25e-214	-	-	-	S	-	-	-	Choline/ethanolamine kinase
LNEOGEMI_03758	1.66e-116	ykuD	-	-	S	-	-	-	protein conserved in bacteria
LNEOGEMI_03759	1.55e-12	-	-	-	S	-	-	-	Erythromycin esterase
LNEOGEMI_03760	9.11e-246	-	-	-	S	-	-	-	Erythromycin esterase
LNEOGEMI_03761	4.24e-239	-	-	-	NT	ko:K03406	ko02020,ko02030,map02020,map02030	ko00000,ko00001,ko02035	chemotaxis protein
LNEOGEMI_03762	2.68e-172	-	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
LNEOGEMI_03763	0.0	-	-	-	E	-	-	-	Sodium:solute symporter family
LNEOGEMI_03764	5.47e-239	-	-	-	E	-	-	-	Amidinotransferase
LNEOGEMI_03765	1.29e-235	ybfP	-	-	K	ko:K13653	-	ko00000,ko03000	Transcriptional regulator
LNEOGEMI_03766	5.91e-199	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
LNEOGEMI_03767	1.14e-129	-	-	-	S	-	-	-	ABC-2 family transporter protein
LNEOGEMI_03768	8.04e-189	-	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_03769	1.61e-193	yxxF	-	-	EG	-	-	-	EamA-like transporter family
LNEOGEMI_03770	1.45e-233	lacR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
LNEOGEMI_03771	7.26e-304	cycB	-	-	G	ko:K02027,ko:K15770,ko:K17237	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG2182 Maltose-binding periplasmic proteins domains
LNEOGEMI_03772	2.04e-312	malC	-	-	P	ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1175 ABC-type sugar transport systems, permease components
LNEOGEMI_03773	1.18e-189	malG	-	-	P	ko:K15772	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	transport
LNEOGEMI_03774	7.15e-299	yvfO	3.2.1.89	-	G	ko:K01224	-	ko00000,ko01000	arabinogalactan
LNEOGEMI_03775	0.0	lacA	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	beta-galactosidase
LNEOGEMI_03776	8.5e-166	rapA	-	-	S	ko:K06359,ko:K06360,ko:K06367	ko02024,map02024	ko00000,ko00001,ko01000	Response regulator aspartate phosphatase
LNEOGEMI_03778	3.04e-117	-	-	-	S	-	-	-	DinB superfamily
LNEOGEMI_03779	1.39e-257	-	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Peptidase dimerisation domain
LNEOGEMI_03780	9.31e-251	-	6.3.5.5	-	S	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	ATP-grasp domain
LNEOGEMI_03781	3.12e-85	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
LNEOGEMI_03782	3.44e-72	-	-	-	S	-	-	-	Domain of unknown function (DUF4260)
LNEOGEMI_03783	1.24e-198	-	2.1.1.184	-	J	ko:K00561	-	br01600,ko00000,ko01000,ko01504,ko03009	Ribosomal RNA adenine dimethylases
LNEOGEMI_03784	3.01e-09	gsiB	-	-	S	ko:K06884	-	ko00000	general stress protein
LNEOGEMI_03785	7.41e-131	-	3.5.1.124	-	S	ko:K05520	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
LNEOGEMI_03787	1.5e-196	-	4.1.2.13	-	G	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-bisphosphate aldolase class-II
LNEOGEMI_03788	8.15e-270	-	-	-	S	ko:K03475	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	PTS system ascorbate-specific transporter subunit IIC
LNEOGEMI_03789	1.07e-58	-	2.7.1.194	-	G	ko:K02822	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG3414 Phosphotransferase system, galactitol-specific IIB component
LNEOGEMI_03790	4.89e-218	-	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
LNEOGEMI_03791	0.0	-	-	-	GKT	-	-	-	Mga helix-turn-helix domain
LNEOGEMI_03792	2.22e-82	-	-	-	E	-	-	-	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
LNEOGEMI_03793	0.0	-	-	-	S	-	-	-	Chlorophyllase enzyme
LNEOGEMI_03794	1.38e-171	bceA	-	-	V	ko:K02003,ko:K11631,ko:K19079	ko01503,ko02010,ko02020,ko05150,map01503,map02010,map02020,map05150	ko00000,ko00001,ko00002,ko01504,ko02000	ABC transporter, ATP-binding protein
LNEOGEMI_03795	0.0	bceB	-	-	V	ko:K11632,ko:K19080	ko01503,ko02010,ko02020,ko05150,map01503,map02010,map02020,map05150	ko00000,ko00001,ko00002,ko01504,ko02000	ABC transporter (permease)
LNEOGEMI_03796	2.38e-238	gerKC	-	-	S	-	-	-	Spore germination B3/ GerAC like, C-terminal
LNEOGEMI_03797	3.89e-228	gerKB	-	-	E	-	-	-	Spore germination protein
LNEOGEMI_03798	3.96e-310	gerKA	-	-	EG	ko:K06295	-	ko00000	Spore germination protein
LNEOGEMI_03799	1.23e-198	-	-	-	-	-	-	-	-
LNEOGEMI_03800	3.97e-226	ectD	1.14.11.55	-	Q	ko:K10674	ko00260,ko01120,map00260,map01120	ko00000,ko00001,ko01000	Phytanoyl-CoA dioxygenase (PhyH)
LNEOGEMI_03801	5.76e-226	-	-	-	G	-	-	-	COG1593 TRAP-type C4-dicarboxylate transport system, large permease component
LNEOGEMI_03802	7.82e-59	-	-	-	G	-	-	-	Tripartite ATP-independent periplasmic transporters, DctQ component
LNEOGEMI_03803	1.52e-160	-	-	-	G	-	-	-	Bacterial extracellular solute-binding protein, family 7
LNEOGEMI_03804	6.86e-102	-	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_03805	0.0	ybbB	-	-	K	ko:K21701	-	ko00000,ko03000	COG2207 AraC-type DNA-binding domain-containing proteins
LNEOGEMI_03806	1.47e-219	feuA	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Iron-uptake system-binding protein
LNEOGEMI_03807	6.04e-228	feuB	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LNEOGEMI_03808	4.15e-234	feuC	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LNEOGEMI_03809	3.7e-192	yuiI	-	-	S	ko:K07017	-	ko00000	Putative esterase
LNEOGEMI_03810	2.1e-305	amaB_2	3.5.3.9	-	E	ko:K02083	ko00230,ko01120,map00230,map01120	ko00000,ko00001,ko01000,ko01002	COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases
LNEOGEMI_03811	1.32e-153	-	-	-	KT	-	-	-	Forkhead associated domain
LNEOGEMI_03812	2.71e-197	-	3.5.2.6	-	V	ko:K17838	ko01501,map01501	ko00000,ko00001,ko01000	beta-lactamase
LNEOGEMI_03813	2.82e-168	-	-	-	S	-	-	-	Nucleotidyltransferase domain
LNEOGEMI_03814	1.66e-291	hemAT	-	-	NT	ko:K06595	-	ko00000,ko02035	chemotaxis protein
LNEOGEMI_03815	1.82e-233	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
LNEOGEMI_03816	1.02e-195	dkgB	-	-	S	-	-	-	Aldo/keto reductase family
LNEOGEMI_03817	4.54e-216	fhuD	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
LNEOGEMI_03818	2.69e-183	-	-	-	K	-	-	-	Helix-turn-helix domain
LNEOGEMI_03819	2.78e-73	-	-	-	S	-	-	-	Ketosteroid isomerase-related protein
LNEOGEMI_03820	5.68e-235	-	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator, LacI family
LNEOGEMI_03821	2.4e-230	-	-	-	S	-	-	-	Oxidoreductase family, C-terminal alpha/beta domain
LNEOGEMI_03822	3.83e-277	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
LNEOGEMI_03823	6.21e-214	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_03824	8.85e-181	-	-	-	G	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_03825	1.72e-243	-	-	-	G	-	-	-	Xylose isomerase
LNEOGEMI_03826	1.87e-197	-	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
LNEOGEMI_03828	1.41e-137	-	-	-	K	ko:K11618	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
LNEOGEMI_03829	2.5e-79	-	-	-	-	-	-	-	-
LNEOGEMI_03830	2.9e-31	-	-	-	-	-	-	-	-
LNEOGEMI_03831	2.08e-112	-	1.8.5.2	-	S	ko:K16937	ko00920,ko01120,map00920,map01120	ko00000,ko00001,ko01000	DoxX
LNEOGEMI_03832	0.0	-	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LNEOGEMI_03833	7.99e-190	yojH	-	-	T	ko:K17763	-	ko00000,ko03021	COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
LNEOGEMI_03834	2.16e-130	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
LNEOGEMI_03835	2.33e-143	yqeB	-	-	-	-	-	-	-
LNEOGEMI_03836	4.36e-68	-	-	-	K	ko:K10947	-	ko00000,ko03000	PadR family transcriptional regulator
LNEOGEMI_03837	2.4e-118	-	-	-	V	-	-	-	(ABC) transporter
LNEOGEMI_03838	5.11e-209	-	-	-	V	-	-	-	VanW like protein
LNEOGEMI_03840	4.2e-158	yoqW	-	-	S	-	-	-	Belongs to the SOS response-associated peptidase family
LNEOGEMI_03841	1.43e-224	isp	-	-	O	ko:K13275	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
LNEOGEMI_03842	6.25e-207	yjlA	-	-	EG	-	-	-	Putative multidrug resistance efflux transporter
LNEOGEMI_03843	0.0	-	-	-	-	-	-	-	-
LNEOGEMI_03844	2.95e-248	dctP	-	-	C	-	-	-	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
LNEOGEMI_03845	0.0	-	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase
LNEOGEMI_03846	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	Belongs to the ClpA ClpB family
LNEOGEMI_03847	1.15e-108	-	3.5.1.28	-	M	ko:K01448	ko01503,map01503	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	COG3103 SH3 domain protein
LNEOGEMI_03848	2.17e-62	-	-	-	-	-	-	-	-
LNEOGEMI_03849	0.0	-	-	-	K	-	-	-	Mga helix-turn-helix domain
LNEOGEMI_03850	3.02e-06	sda	-	-	S	ko:K06371	-	ko00000	sporulation
LNEOGEMI_03852	7.19e-83	yqiX	-	-	S	-	-	-	YolD-like protein
LNEOGEMI_03853	6.15e-280	-	-	-	P	ko:K07148	-	ko00000	Protein of unknown function (DUF418)
LNEOGEMI_03854	6.84e-277	-	-	-	GK	-	-	-	ROK family
LNEOGEMI_03855	2.1e-307	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
LNEOGEMI_03856	2.45e-217	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_03857	9.08e-189	-	-	-	G	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_03858	2.41e-236	-	-	-	S	-	-	-	Oxidoreductase family, C-terminal alpha/beta domain
LNEOGEMI_03859	5.07e-236	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
LNEOGEMI_03860	3.51e-188	-	5.1.3.22	-	G	ko:K03079	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Xylose isomerase-like TIM barrel
LNEOGEMI_03861	1.18e-223	-	3.8.1.3	-	S	ko:K01561	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Alpha/beta hydrolase family
LNEOGEMI_03862	4.62e-189	gltR3	-	-	K	-	-	-	LysR substrate binding domain
LNEOGEMI_03863	1.96e-158	yxjF	1.1.1.30	-	IQ	ko:K00019	ko00072,ko00650,ko01100,map00072,map00650,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetoacetate from 3-hydroxybutyrate
LNEOGEMI_03864	1.13e-277	-	-	-	EGP	-	-	-	COG0477 Permeases of the major facilitator superfamily
LNEOGEMI_03865	0.0	-	-	-	EGP	ko:K18926	-	ko00000,ko00002,ko02000	the major facilitator superfamily
LNEOGEMI_03866	2.94e-142	-	-	-	K	-	-	-	Bacterial transcriptional repressor C-terminal
LNEOGEMI_03867	2.09e-171	-	-	-	S	-	-	-	Methyltransferase domain
LNEOGEMI_03868	7.74e-280	adhB	1.1.1.1, 1.1.1.284	-	E	ko:K00121	ko00010,ko00071,ko00350,ko00625,ko00626,ko00680,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko05204,map00010,map00071,map00350,map00625,map00626,map00680,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01200,map01220,map05204	ko00000,ko00001,ko01000	COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases
LNEOGEMI_03869	3.73e-213	fhuD11	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
LNEOGEMI_03870	1.36e-220	fhuG7	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LNEOGEMI_03871	4.89e-70	isdG	1.14.99.48	-	C	ko:K07145	ko00860,ko01110,map00860,map01110	ko00000,ko00001,ko01000	Allows bacterial pathogens to use the host heme as an iron source. Catalyzes the oxidative degradation of the heme macrocyclic porphyrin ring to the biliverdin in the presence of a suitable electron donor such as ascorbate or NADPH--cytochrome P450 reductase, with subsequent release of free iron
LNEOGEMI_03872	1.25e-143	isdC	-	-	M	-	-	-	NEAr Transporter domain
LNEOGEMI_03873	0.0	-	-	-	M	-	-	-	Cell surface protein
LNEOGEMI_03874	3.8e-199	isdE	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
LNEOGEMI_03875	2.91e-211	fhuB11	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LNEOGEMI_03876	4.56e-168	fepC	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
LNEOGEMI_03877	8.64e-177	srtB	3.4.22.70	-	S	ko:K08600	-	ko00000,ko01000,ko01002,ko01011	Sortase family
LNEOGEMI_03878	1.77e-302	-	-	-	S	-	-	-	COG1253 Hemolysins and related proteins containing CBS domains
LNEOGEMI_03879	3.67e-123	bcrC	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Bacitracin ABC transporter permease
LNEOGEMI_03880	3.7e-234	-	-	-	IQ	-	-	-	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
LNEOGEMI_03881	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LNEOGEMI_03882	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LNEOGEMI_03883	9.83e-12	yqbO1	-	-	S	-	-	-	Domain of unknown function (DUF370)
LNEOGEMI_03884	4.47e-256	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LNEOGEMI_03885	1.15e-43	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain
LNEOGEMI_03886	3.45e-264	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
LNEOGEMI_03887	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LNEOGEMI_03888	3.58e-22	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
LNEOGEMI_03889	2.54e-72	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
LNEOGEMI_03890	8.72e-178	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
LNEOGEMI_03891	9.02e-141	jag	-	-	S	ko:K06346	-	ko00000	single-stranded nucleic acid binding R3H
LNEOGEMI_03892	4.9e-315	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
LNEOGEMI_03893	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
LNEOGEMI_03894	2.39e-165	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of guanine in position 535 of 16S rRNA
LNEOGEMI_03895	1.49e-191	noc	-	-	D	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division and chromosome segregation by preventing the formation of the Z ring through the nucleoid, which would cause chromosome breakage
LNEOGEMI_03896	3.38e-173	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	COG1192 ATPases involved in chromosome partitioning
LNEOGEMI_03897	1.01e-192	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
LNEOGEMI_03898	4.44e-273	-	-	-	E	-	-	-	Aminotransferase class-V
LNEOGEMI_03899	4.88e-147	yyaC	-	-	S	-	-	-	Sporulation protein YyaC
LNEOGEMI_03900	1.18e-229	yyaD	-	-	S	-	-	-	Membrane
LNEOGEMI_03901	1.19e-37	yyzM	-	-	S	-	-	-	protein conserved in bacteria
LNEOGEMI_03902	2.81e-246	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
LNEOGEMI_03903	3.39e-60	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
LNEOGEMI_03904	4.66e-89	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
LNEOGEMI_03905	4.32e-48	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LNEOGEMI_03906	2.06e-186	yybS	-	-	S	-	-	-	membrane
LNEOGEMI_03907	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
LNEOGEMI_03908	2.34e-87	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	binds to the 23S rRNA
LNEOGEMI_03909	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
LNEOGEMI_03910	2.72e-315	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LNEOGEMI_03916	2.06e-170	yycF	-	-	T	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LNEOGEMI_03917	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
LNEOGEMI_03918	3.42e-314	yycH	-	-	S	-	-	-	protein conserved in bacteria
LNEOGEMI_03919	5.12e-211	yycI	-	-	S	-	-	-	protein conserved in bacteria
LNEOGEMI_03920	1.9e-189	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I
LNEOGEMI_03921	8.9e-271	yyxA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LNEOGEMI_03922	1.43e-105	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
LNEOGEMI_03923	3.9e-152	spoIVCA	-	-	L	ko:K06400	-	ko00000	COG1961 Site-specific recombinases, DNA invertase Pin homologs
LNEOGEMI_03924	5.68e-41	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
LNEOGEMI_03925	8.6e-154	-	-	-	-	-	-	-	-
LNEOGEMI_03926	8.97e-96	-	-	-	V	-	-	-	type I restriction modification DNA specificity domain
LNEOGEMI_03927	0.0	-	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	Type I restriction-modification system
LNEOGEMI_03928	6.1e-227	XK27_09655	-	-	S	-	-	-	Virulence protein RhuM family
LNEOGEMI_03930	2.59e-123	-	-	-	K	ko:K22301	-	ko00000,ko03000	Belongs to the GbsR family
LNEOGEMI_03931	5.92e-280	gbuA	3.6.3.32	-	E	ko:K02000	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	glycine betaine
LNEOGEMI_03932	4.62e-188	gbuB	-	-	P	ko:K02001,ko:K02002	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	glycine betaine
LNEOGEMI_03933	3.98e-205	opuAC	-	-	E	ko:K02001,ko:K02002	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	glycine betaine
LNEOGEMI_03934	1.17e-249	cfr	2.1.1.224	-	J	ko:K15632	-	ko00000,ko01000,ko01504,ko03009	Specifically methylates position 8 of adenine 2503 in 23S rRNA. Confers resistance to some classes of antibiotics
LNEOGEMI_03935	0.0	yerA	3.5.4.2	-	F	ko:K01486	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	adenine deaminase
LNEOGEMI_03936	1.55e-66	yerC	-	-	S	-	-	-	protein conserved in bacteria
LNEOGEMI_03937	0.0	ade	3.5.4.2	-	F	ko:K01486	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
LNEOGEMI_03938	0.0	acyII	3.5.1.11	-	S	ko:K01434	ko00311,ko01130,map00311,map01130	ko00000,ko00001,ko01000,ko01002	Penicillin amidase
LNEOGEMI_03939	1.16e-209	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
LNEOGEMI_03940	5.18e-34	mepA	-	-	V	-	-	-	MATE efflux family protein
LNEOGEMI_03942	6.69e-224	fhuB	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LNEOGEMI_03943	1.45e-216	fhuG	-	-	P	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LNEOGEMI_03944	1.02e-194	fhuC	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
LNEOGEMI_03946	8.05e-166	pcrB	-	-	I	ko:K07094	-	ko00000,ko01000	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
LNEOGEMI_03947	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
LNEOGEMI_03948	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LNEOGEMI_03949	2.82e-281	camS	-	-	S	-	-	-	COG4851 Protein involved in sex pheromone biosynthesis
LNEOGEMI_03950	1.29e-260	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC-type transport system, periplasmic component surface lipoprotein
LNEOGEMI_03951	0.0	yufO	3.6.3.17	-	S	ko:K02056	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
LNEOGEMI_03952	1.52e-241	yufP	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
LNEOGEMI_03953	7.13e-207	yufQ	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
LNEOGEMI_03955	4.95e-221	-	-	-	-	-	-	-	-
LNEOGEMI_03956	3.38e-114	yizA	-	-	S	-	-	-	DinB family
LNEOGEMI_03957	3.39e-60	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LNEOGEMI_03958	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
LNEOGEMI_03959	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LNEOGEMI_03960	1.26e-213	dagK	2.7.1.107	-	I	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
LNEOGEMI_03961	5.49e-102	ykuN	-	-	C	ko:K03839	-	ko00000	Flavodoxin
LNEOGEMI_03962	0.0	rlmCD	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LNEOGEMI_03963	9.87e-93	-	-	-	-	-	-	-	-
LNEOGEMI_03964	0.0	-	-	-	S	-	-	-	AAA-like domain
LNEOGEMI_03965	1.25e-298	-	-	-	S	-	-	-	the current gene model (or a revised gene model) may contain a frame shift
LNEOGEMI_03966	1.73e-198	yddH	-	-	M	-	-	-	Lysozyme-like
LNEOGEMI_03967	3.25e-173	-	-	-	S	-	-	-	Conjugative transposon protein TcpC
LNEOGEMI_03968	6.4e-179	blt5	-	-	EGP	-	-	-	of the major facilitator superfamily
LNEOGEMI_03969	1.21e-43	-	-	-	S	-	-	-	Predicted integral membrane protein (DUF2269)
LNEOGEMI_03970	4.03e-239	pbpX	-	-	V	-	-	-	penicillin-binding protein
LNEOGEMI_03971	3.73e-54	-	-	-	S	-	-	-	Protein of unknown function (DUF4064)
LNEOGEMI_03972	3.36e-100	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
LNEOGEMI_03974	3.4e-176	-	-	-	S	-	-	-	Alpha/beta hydrolase family
LNEOGEMI_03976	2.46e-139	-	-	-	L	ko:K07487	-	ko00000	PFAM transposase IS4 family protein
LNEOGEMI_03977	1.58e-94	-	-	-	L	ko:K07487	-	ko00000	Transposase
LNEOGEMI_03978	2.24e-134	-	-	-	K	-	-	-	BetI-type transcriptional repressor, C-terminal
LNEOGEMI_03979	1.46e-150	-	-	-	S	-	-	-	Sap, sulfolipid-1-addressing protein
LNEOGEMI_03980	2.13e-44	-	-	-	-	-	-	-	-
LNEOGEMI_03981	1.55e-206	-	-	-	I	-	-	-	Acyltransferase family
LNEOGEMI_03982	8.22e-41	-	-	-	K	-	-	-	Sigma-70, region 4
LNEOGEMI_03983	2.2e-42	-	-	-	K	-	-	-	Sigma-70, region 4
LNEOGEMI_03984	2.67e-52	-	-	-	S	-	-	-	Helix-turn-helix domain
LNEOGEMI_03985	4.61e-106	ppiB	5.2.1.8	-	O	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LNEOGEMI_03986	4.32e-315	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
LNEOGEMI_03987	0.0	spoVAF	-	-	EG	ko:K06408	-	ko00000	Stage V sporulation protein AF
LNEOGEMI_03988	2.18e-138	spoVAEA	-	-	S	ko:K06407	-	ko00000	Stage V sporulation protein AE
LNEOGEMI_03989	5.03e-75	-	-	-	S	ko:K06407	-	ko00000	Pfam:SpoVA
LNEOGEMI_03990	5.67e-233	spoVAD	-	-	I	ko:K06406	-	ko00000	Stage V sporulation protein AD
LNEOGEMI_03991	1.18e-103	-	-	-	S	ko:K06405	-	ko00000	Pfam:SpoVA
LNEOGEMI_03992	7.67e-175	sigF	-	-	K	ko:K03091	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LNEOGEMI_03993	3.77e-97	spoIIAB	2.7.11.1	-	F	ko:K06379	-	ko00000,ko01000	Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti-anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition
LNEOGEMI_03994	7.27e-73	spoIIAA	-	-	T	ko:K06378	-	ko00000	Belongs to the anti-sigma-factor antagonist family
LNEOGEMI_03995	1.21e-268	dacF	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
LNEOGEMI_03996	1.42e-176	-	3.5.1.104	-	G	ko:K22278	-	ko00000,ko01000	Polysaccharide deacetylase
LNEOGEMI_03997	2.22e-108	yvsG	-	-	S	ko:K07038	-	ko00000	LexA-binding, inner membrane-associated putative hydrolase
LNEOGEMI_03998	1.68e-69	-	-	-	-	-	-	-	-
LNEOGEMI_03999	3.18e-29	yycD	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2188)
LNEOGEMI_04000	2.08e-302	ycnB	-	-	EGP	-	-	-	the major facilitator superfamily
LNEOGEMI_04001	7.51e-154	-	-	-	J	-	-	-	translation release factor activity
LNEOGEMI_04002	4.19e-92	ohrB	-	-	O	-	-	-	Organic hydroperoxide resistance protein
LNEOGEMI_04003	7.13e-294	pdp	2.4.2.2	-	F	ko:K00756	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	phosphorylase
LNEOGEMI_04004	3.88e-284	deoB	5.4.2.7	-	G	ko:K01839	ko00030,ko00230,map00030,map00230	ko00000,ko00001,ko01000	Phosphotransfer between the C1 and C5 carbon atoms of pentose
LNEOGEMI_04005	5.76e-212	xerD	-	-	L	ko:K04763	-	ko00000,ko03036	recombinase XerD
LNEOGEMI_04006	8.77e-19	-	-	-	S	-	-	-	Protein of unknown function (DUF4227)
LNEOGEMI_04007	8.92e-111	fur	-	-	P	ko:K03711	-	ko00000,ko03000	Belongs to the Fur family
LNEOGEMI_04008	6.83e-140	spoIIM	-	-	S	ko:K06384	-	ko00000	Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane
LNEOGEMI_04009	5.85e-117	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	Belongs to the Nudix hydrolase family
LNEOGEMI_04011	1.6e-106	-	-	-	CO	-	-	-	Thioredoxin-like
LNEOGEMI_04012	1.47e-179	uppP	3.6.1.27	-	V	ko:K06153	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
LNEOGEMI_04013	9.45e-187	-	-	-	G	ko:K10119	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_04014	2.2e-194	-	-	-	G	ko:K10118	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_04015	4.43e-255	-	-	-	T	ko:K07720	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	helix_turn_helix, arabinose operon control protein
LNEOGEMI_04016	0.0	-	2.7.13.3	-	T	ko:K07718	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Cache domain
LNEOGEMI_04017	1.13e-291	-	-	-	G	ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
LNEOGEMI_04018	9.59e-268	mtnW	5.3.2.5	-	G	ko:K08965	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the enolization of 2,3-diketo-5- methylthiopentyl-1-phosphate (DK-MTP-1-P) into 2-hydroxy-3-keto-5- methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P)
LNEOGEMI_04019	1.04e-118	-	-	-	S	-	-	-	UPF0316 protein
LNEOGEMI_04020	6.73e-107	ypqE	-	-	G	ko:K02777	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	COG2190 Phosphotransferase system IIA components
LNEOGEMI_04021	2.79e-125	yvbF	-	-	K	ko:K22301	-	ko00000,ko03000	Belongs to the GbsR family
LNEOGEMI_04022	1.48e-69	ogt	-	-	L	ko:K07443	-	ko00000	Methyltransferase
LNEOGEMI_04023	3.55e-106	-	-	-	V	-	-	-	COG4767 Glycopeptide antibiotics resistance protein
LNEOGEMI_04024	1.84e-234	cah	3.1.1.41	-	Q	ko:K01060	ko00311,ko01130,map00311,map01130	ko00000,ko00001,ko01000	Acetyl xylan esterase (AXE1)
LNEOGEMI_04025	0.0	asnO	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
LNEOGEMI_04026	1.63e-258	proB	2.7.2.11	-	E	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
LNEOGEMI_04027	1.26e-286	proA	1.2.1.41	-	E	ko:K00147	ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
LNEOGEMI_04028	1.99e-180	proC	1.5.1.2	-	E	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LNEOGEMI_04029	4.13e-161	-	-	-	P	ko:K08714	-	ko00000,ko02000	Polycystin cation channel
LNEOGEMI_04030	3.56e-314	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
LNEOGEMI_04032	3.09e-66	-	-	-	-	-	-	-	-
LNEOGEMI_04033	3.57e-62	tnrA	-	-	K	-	-	-	transcriptional
LNEOGEMI_04034	1.31e-176	yibQ	-	-	S	ko:K09798	-	ko00000	protein conserved in bacteria
LNEOGEMI_04035	0.0	apr	-	-	O	-	-	-	Belongs to the peptidase S8 family
LNEOGEMI_04036	1.01e-55	-	-	-	-	-	-	-	-
LNEOGEMI_04037	7.62e-97	ykuL	-	-	S	-	-	-	CBS domain
LNEOGEMI_04038	4.89e-102	-	-	-	S	-	-	-	Pfam Polyketide cyclase dehydrase and lipid transport
LNEOGEMI_04039	1.95e-89	yaaR	-	-	S	ko:K09770	-	ko00000	protein conserved in bacteria
LNEOGEMI_04041	1.1e-120	-	3.5.1.104	-	G	ko:K22278	-	ko00000,ko01000	Polysaccharide deacetylase
LNEOGEMI_04042	1.86e-247	yqjE	3.4.11.14, 3.4.11.4	-	E	ko:K01258,ko:K01263	-	ko00000,ko01000,ko01002	COG2195 Di- and tripeptidases
LNEOGEMI_04043	5.72e-90	mce	5.1.99.1	-	E	ko:K05606	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	COG0346 Lactoylglutathione lyase and related lyases
LNEOGEMI_04045	5.96e-122	yqjB	-	-	S	-	-	-	protein conserved in bacteria
LNEOGEMI_04046	1.84e-214	yqjA	-	-	S	-	-	-	Putative aromatic acid exporter C-terminal domain
LNEOGEMI_04047	1.84e-215	-	-	-	F	-	-	-	GHKL domain
LNEOGEMI_04048	1.5e-24	pbuO_1	-	-	S	ko:K06901	-	ko00000,ko02000	Permease
LNEOGEMI_04049	2.19e-82	pbuO_1	-	-	S	ko:K06901	-	ko00000,ko02000	permease
LNEOGEMI_04050	3.22e-119	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LNEOGEMI_04051	3.12e-104	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
LNEOGEMI_04052	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
LNEOGEMI_04053	0.0	pbp1B	2.4.1.129	GT51	M	ko:K03693,ko:K12551	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	COG0744 Membrane carboxypeptidase (penicillin-binding protein)
LNEOGEMI_04054	3.55e-297	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LNEOGEMI_04055	4.92e-142	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
LNEOGEMI_04056	5.4e-112	ytsP	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
LNEOGEMI_04057	1.18e-111	-	-	-	L	ko:K07496	-	ko00000	Transposase
LNEOGEMI_04058	8.74e-146	yttP	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_04059	1.78e-181	hisK	3.1.3.15	-	E	ko:K04486	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	COG1387 Histidinol phosphatase and related hydrolases of the PHP family
LNEOGEMI_04060	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
LNEOGEMI_04061	1.07e-262	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Cysteine desulfurase
LNEOGEMI_04062	1.78e-283	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LNEOGEMI_04063	1.17e-38	-	-	-	S	ko:K06418,ko:K06419	-	ko00000	spore protein
LNEOGEMI_04064	2.68e-228	sppA	-	-	OU	ko:K04773	-	ko00000,ko01000,ko01002	signal peptide peptidase SppA
LNEOGEMI_04065	1.82e-126	yteJ	-	-	S	-	-	-	RDD family
LNEOGEMI_04066	1.49e-154	ytfI	-	-	S	-	-	-	Protein of unknown function (DUF2953)
LNEOGEMI_04067	1.19e-97	ytfJ	-	-	S	-	-	-	Sporulation protein YtfJ
LNEOGEMI_04068	1.77e-250	-	-	-	EGP	-	-	-	COG0477 Permeases of the major facilitator superfamily
LNEOGEMI_04069	3.92e-110	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
LNEOGEMI_04070	1.33e-228	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	DNA methylase
LNEOGEMI_04071	2.04e-275	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LNEOGEMI_04072	3.92e-54	-	-	-	-	-	-	-	-
LNEOGEMI_04073	5.82e-50	-	-	-	-	-	-	-	-
LNEOGEMI_04074	7.81e-37	-	-	-	T	-	-	-	Protein conserved in bacteria
LNEOGEMI_04075	2.44e-105	-	-	-	S	ko:K21490	-	ko00000,ko02048	SMI1 / KNR4 family (SUKH-1)
LNEOGEMI_04076	3.07e-75	-	-	-	U	ko:K21493	-	ko00000,ko01000,ko02048	LXG domain of WXG superfamily
LNEOGEMI_04077	1.03e-76	-	-	-	-	-	-	-	-
LNEOGEMI_04078	2.05e-310	-	-	-	S	-	-	-	LXG domain of WXG superfamily
LNEOGEMI_04079	8.77e-39	-	-	-	S	-	-	-	Family of unknown function (DUF5344)
LNEOGEMI_04080	3e-39	-	-	-	S	-	-	-	Domain of unknown function (DUF5082)
LNEOGEMI_04082	1.55e-228	thiL	2.7.4.16	-	H	ko:K00946	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
LNEOGEMI_04083	7.46e-106	ydiB	-	-	S	ko:K06925	-	ko00000,ko03016	ATPase or kinase
LNEOGEMI_04084	7.66e-163	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	COG1214 Inactive homolog of metal-dependent proteases
LNEOGEMI_04085	3.01e-112	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	This enzyme acetylates the N-terminal alanine of ribosomal protein S18
LNEOGEMI_04086	2.91e-231	tsaD	2.3.1.234	-	O	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
LNEOGEMI_04087	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter
LNEOGEMI_04088	3.56e-145	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
LNEOGEMI_04089	7.3e-34	tatA	-	-	U	ko:K03116	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
LNEOGEMI_04090	1.16e-178	tatC	-	-	U	ko:K03118	ko03060,ko03070,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LNEOGEMI_04091	5.64e-232	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LNEOGEMI_04092	4.57e-142	metP_2	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG2011 ABC-type metal ion transport system, permease component
LNEOGEMI_04093	4.82e-189	-	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	COG1464 ABC-type metal ion transport system, periplasmic component surface antigen
LNEOGEMI_04094	4.84e-256	gldA	-	-	C	ko:K08317	-	ko00000,ko01000	COG0371 Glycerol dehydrogenase and related enzymes
LNEOGEMI_04095	7.8e-152	ydiL	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
LNEOGEMI_04096	7.46e-59	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
LNEOGEMI_04097	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
LNEOGEMI_04098	0.0	-	-	-	G	-	-	-	Mga helix-turn-helix domain
LNEOGEMI_04099	2.27e-93	-	2.7.1.194	-	GT	ko:K02821,ko:K03483	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000,ko03000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LNEOGEMI_04100	5.5e-56	-	2.7.1.194	-	G	ko:K02822	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG3414 Phosphotransferase system, galactitol-specific IIB component
LNEOGEMI_04101	1.25e-282	ulaA	-	-	S	ko:K03475	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	PTS system ascorbate-specific transporter subunit IIC
LNEOGEMI_04102	1.43e-166	-	-	-	S	-	-	-	carbohydrate derivative metabolic process
LNEOGEMI_04103	5.86e-157	ypdP	-	-	S	ko:K09125	-	ko00000	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
LNEOGEMI_04104	2.12e-183	-	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
LNEOGEMI_04105	0.0	yoaI	1.14.14.9	-	Q	ko:K00483	ko00350,ko01120,ko01220,map00350,map01120,map01220	ko00000,ko00001,ko01000	COG2368 Aromatic ring hydroxylase
LNEOGEMI_04106	7.31e-114	moaC	4.6.1.17	-	H	ko:K03637	ko00790,ko01100,ko04122,map00790,map01100,map04122	ko00000,ko00001,ko01000	Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)
LNEOGEMI_04107	1.59e-124	mobA	2.7.7.77	-	H	ko:K03752	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
LNEOGEMI_04108	3.23e-108	moaB	2.7.7.75	-	H	ko:K03638	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	May be involved in the biosynthesis of molybdopterin
LNEOGEMI_04109	1.34e-233	moaA	4.1.99.22	-	H	ko:K03639	ko00790,ko01100,ko04122,map00790,map01100,map04122	ko00000,ko00001,ko01000	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
LNEOGEMI_04110	7.8e-299	moeA	2.10.1.1	-	H	ko:K03750	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko01000	molybdopterin
LNEOGEMI_04111	1.58e-113	mobB	-	-	H	ko:K03753	-	ko00000	molybdopterin-guanine dinucleotide biosynthesis protein
LNEOGEMI_04112	2.79e-97	moaE	2.8.1.12	-	H	ko:K03635	ko00790,ko01100,ko04122,map00790,map01100,map04122	ko00000,ko00001,ko01000	COG0314 Molybdopterin converting factor, large subunit
LNEOGEMI_04113	2.38e-46	moaD	-	-	H	ko:K03636	ko04122,map04122	ko00000,ko00001	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
LNEOGEMI_04114	2.71e-177	nirC	-	-	P	ko:K02598	-	ko00000,ko02000	Formate/nitrite transporter
LNEOGEMI_04115	0.0	yjgC	1.17.1.9	-	C	ko:K00123	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	ko00000,ko00001,ko01000	formate dehydrogenase (NAD+) activity
LNEOGEMI_04116	5.65e-136	yjgD	-	-	S	-	-	-	Protein of unknown function (DUF1641)
LNEOGEMI_04117	1.08e-171	fdhD	-	-	C	ko:K02379	-	ko00000	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
LNEOGEMI_04118	5.72e-110	-	-	-	S	-	-	-	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
LNEOGEMI_04119	1.75e-10	-	-	-	-	-	-	-	-
LNEOGEMI_04120	2.57e-10	-	-	-	-	-	-	-	-
LNEOGEMI_04121	0.0	yfhO	-	-	S	-	-	-	Bacterial membrane protein YfhO
LNEOGEMI_04122	2.07e-90	-	-	-	S	-	-	-	GtrA-like protein
LNEOGEMI_04123	2.22e-231	csbB	-	GT2	M	ko:K20534	-	ko00000,ko01000,ko01005,ko02000	COG0463 Glycosyltransferases involved in cell wall biogenesis
LNEOGEMI_04124	2.48e-193	-	-	-	S	ko:K07025	-	ko00000	Haloacid dehalogenase-like hydrolase
LNEOGEMI_04125	5.88e-173	-	-	-	-	-	-	-	-
LNEOGEMI_04126	1.33e-191	tcyA_1	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	Bacterial periplasmic substrate-binding proteins
LNEOGEMI_04127	7.32e-144	-	-	-	E	ko:K02029	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_04128	1.09e-151	-	-	-	E	ko:K02029,ko:K10009	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_04129	6.89e-192	-	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	COG1126 ABC-type polar amino acid transport system, ATPase component
LNEOGEMI_04130	2.91e-94	-	-	-	M	-	-	-	ArpU family transcriptional regulator
LNEOGEMI_04131	4e-167	-	-	-	L	ko:K07486	-	ko00000	COG3547 Transposase and inactivated derivatives
LNEOGEMI_04132	5.02e-255	ispG	1.17.7.1, 1.17.7.3	-	I	ko:K03526	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
LNEOGEMI_04133	8.72e-71	fimV	-	-	NU	ko:K08086,ko:K15845	ko05120,map05120	ko00000,ko00001	translation initiation factor activity
LNEOGEMI_04134	6.32e-230	-	-	-	EGP	ko:K08221	-	ko00000,ko02000	Sugar (and other) transporter
LNEOGEMI_04135	2.99e-192	ypuA	-	-	S	-	-	-	Secreted protein
LNEOGEMI_04136	1.09e-146	-	-	-	O	-	-	-	NfeD-like C-terminal, partner-binding
LNEOGEMI_04137	2.56e-248	XK27_00915	-	-	C	-	-	-	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LNEOGEMI_04138	0.0	yjbB	-	-	P	ko:K03324	-	ko00000,ko02000	COG1283 Na phosphate symporter
LNEOGEMI_04144	4.56e-148	sodA	1.15.1.1	-	P	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	ko00000,ko00001,ko01000	radicals which are normally produced within the cells and which are toxic to biological systems
LNEOGEMI_04145	8.36e-295	yqgE	-	-	EGP	ko:K08222	-	ko00000,ko02000	Major facilitator superfamily
LNEOGEMI_04147	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	penicillin-binding protein
LNEOGEMI_04148	9.67e-99	-	-	-	S	-	-	-	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LNEOGEMI_04149	7.46e-79	-	-	-	-	-	-	-	-
LNEOGEMI_04150	5.85e-158	-	-	-	G	-	-	-	PFAM Glycoside hydrolase 15-related
LNEOGEMI_04151	6.04e-27	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
LNEOGEMI_04152	7.02e-122	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LNEOGEMI_04153	8.93e-180	-	-	-	S	-	-	-	Integral membrane protein DUF92
LNEOGEMI_04154	3.31e-238	moeB	2.7.7.73, 2.7.7.80	-	H	ko:K03148,ko:K21029	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000	COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
LNEOGEMI_04155	2.16e-301	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter
LNEOGEMI_04157	0.0	gluP	3.4.21.105	-	O	ko:K19225	-	ko00000,ko01000,ko01002	membrane protein (homolog of Drosophila rhomboid)
LNEOGEMI_04158	0.0	spoVAF	-	-	EG	ko:K06408	-	ko00000	Bacillus/Clostridium GerA spore germination protein
LNEOGEMI_04159	7.09e-88	XK27_05190	-	-	S	-	-	-	Protein of unknown function (DUF1694)
LNEOGEMI_04160	2.14e-105	-	-	-	-	-	-	-	-
LNEOGEMI_04161	1.37e-10	yqgQ	-	-	S	-	-	-	protein conserved in bacteria
LNEOGEMI_04162	1.04e-221	glcK	2.7.1.2	-	G	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Glucokinase
LNEOGEMI_04163	0.0	aspA	4.3.1.1	-	E	ko:K01744	ko00250,ko01100,map00250,map01100	ko00000,ko00001,ko01000	Aspartate ammonia-lyase
LNEOGEMI_04164	1.63e-140	thiE	2.5.1.3	-	H	ko:K00788	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
LNEOGEMI_04165	1.28e-37	-	-	-	H	ko:K03154	ko04122,map04122	ko00000,ko00001	ThiS family
LNEOGEMI_04166	2.03e-179	thiG	2.8.1.10	-	H	ko:K03149	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
LNEOGEMI_04167	3.33e-265	thiO	1.4.3.19	-	E	ko:K03153	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	Glycine oxidase
LNEOGEMI_04168	4.95e-180	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
LNEOGEMI_04169	6.28e-124	-	-	-	-	-	-	-	-
LNEOGEMI_04170	3.18e-238	yqgV	-	-	S	-	-	-	Thiamine-binding protein
LNEOGEMI_04171	5.03e-93	yjcF	-	-	S	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
LNEOGEMI_04172	3.32e-119	yjcG	-	-	J	-	-	-	Belongs to the 2H phosphoesterase superfamily. YjcG family
LNEOGEMI_04173	1.5e-171	yjcH	-	-	P	ko:K07214	-	ko00000	COG2382 Enterochelin esterase and related enzymes
LNEOGEMI_04174	4.16e-42	-	-	-	-	-	-	-	-
LNEOGEMI_04175	3.54e-67	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
LNEOGEMI_04176	2.58e-41	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
LNEOGEMI_04177	2.89e-100	-	-	-	S	-	-	-	glyoxalase bleomycin resistance protein dioxygenase
LNEOGEMI_04178	2.47e-308	-	-	-	C	-	-	-	Na+/H+ antiporter family
LNEOGEMI_04179	2e-239	dapB	1.4.1.12, 1.4.1.26	-	S	ko:K21672	ko00310,ko00330,ko00472,map00310,map00330,map00472	ko00000,ko00001,ko01000	Dihydrodipicolinate reductase, N-terminus
LNEOGEMI_04180	6.48e-216	-	-	-	K	-	-	-	LysR substrate binding domain
LNEOGEMI_04181	2.11e-82	-	-	-	S	ko:K06880	-	ko00000,ko01000,ko01504	Erythromycin esterase
LNEOGEMI_04182	7.26e-166	-	-	-	K	ko:K03088	-	ko00000,ko03021	TIGRFAM RNA polymerase sigma factor, sigma-70 family
LNEOGEMI_04183	3.59e-49	ydfG	-	-	S	-	-	-	Carboxymuconolactone decarboxylase family
LNEOGEMI_04184	9.56e-58	-	-	-	-	-	-	-	-
LNEOGEMI_04185	1.34e-86	-	-	-	-	-	-	-	-
LNEOGEMI_04186	3.09e-88	-	-	-	-	-	-	-	-
LNEOGEMI_04187	6.13e-176	-	-	-	S	-	-	-	GNAT acetyltransferase
LNEOGEMI_04188	8.55e-251	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LNEOGEMI_04190	0.0	-	-	-	T	-	-	-	Histidine kinase
LNEOGEMI_04192	0.0	-	-	-	-	-	-	-	-
LNEOGEMI_04193	4.1e-144	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter
LNEOGEMI_04194	4.93e-106	-	-	-	P	ko:K02049	-	ko00000,ko00002,ko02000	pfam abc
LNEOGEMI_04195	3.69e-131	-	-	-	P	ko:K02051	-	ko00000,ko00002,ko02000	NMT1-like family
LNEOGEMI_04196	3.64e-121	-	-	-	P	ko:K02050	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_04197	9.62e-66	-	-	-	K	-	-	-	HxlR-like helix-turn-helix
LNEOGEMI_04198	1.05e-74	-	-	-	S	-	-	-	Protein of unknown function (DUF4242)
LNEOGEMI_04199	1.07e-114	-	-	-	I	-	-	-	acyl-CoA dehydrogenase
LNEOGEMI_04204	5.2e-141	-	-	-	UW	ko:K21493	-	ko00000,ko01000,ko02048	nuclease activity
LNEOGEMI_04205	2.11e-72	-	-	-	UW	ko:K21493	-	ko00000,ko01000,ko02048	nuclease activity
LNEOGEMI_04210	2.03e-224	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
LNEOGEMI_04211	1.49e-234	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase UDP-N-acetylglucosamine-1-phosphate transferase
LNEOGEMI_04212	6.12e-179	tuaG	-	GT2	M	ko:K16698	-	ko00000,ko01000,ko01003	Glycosyltransferase like family 2
LNEOGEMI_04213	1.16e-88	-	-	-	-	-	-	-	-
LNEOGEMI_04214	0.0	tuaD	1.1.1.22	-	M	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
LNEOGEMI_04215	5.22e-297	-	-	-	M	-	-	-	-O-antigen
LNEOGEMI_04216	3.26e-70	-	-	-	-	-	-	-	-
LNEOGEMI_04217	3.77e-248	-	-	-	M	-	-	-	Glycosyl transferases group 1
LNEOGEMI_04218	5.24e-188	-	-	-	S	-	-	-	Glycosyl transferase family 2
LNEOGEMI_04219	0.0	-	-	-	S	-	-	-	Polysaccharide biosynthesis protein
LNEOGEMI_04220	1.44e-146	-	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_04221	9.49e-143	sodA	1.15.1.1	-	P	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	ko00000,ko00001,ko01000	Iron/manganese superoxide dismutases, C-terminal domain
LNEOGEMI_04222	7.76e-51	-	-	-	S	-	-	-	Protein of unknown function (DUF1450)
LNEOGEMI_04223	1.82e-41	-	-	-	C	-	-	-	4Fe-4S binding domain
LNEOGEMI_04224	4.05e-88	-	-	-	S	ko:K09957	-	ko00000	Putative glycolipid-binding
LNEOGEMI_04225	7.21e-300	-	-	-	S	ko:K12940	-	ko00000,ko01002	Peptidase dimerisation domain
LNEOGEMI_04226	0.0	-	-	-	H	ko:K12942	-	ko00000	AbgT putative transporter family
LNEOGEMI_04227	0.0	-	-	-	S	ko:K12941,ko:K21613	-	ko00000,ko01000,ko01002	amidohydrolase
LNEOGEMI_04228	2.86e-304	-	-	-	KT	-	-	-	transcriptional regulatory protein
LNEOGEMI_04229	1.14e-185	cah	4.2.1.1	-	P	ko:K01674	ko00910,map00910	ko00000,ko00001,ko01000	Eukaryotic-type carbonic anhydrase
LNEOGEMI_04230	6.12e-258	thrCA	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Pyridoxal-phosphate dependent enzyme
LNEOGEMI_04232	6.55e-109	-	-	-	M	ko:K01993	-	ko00000	PFAM secretion protein HlyD family protein
LNEOGEMI_04233	7.4e-179	ybhF_2	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	COG1131 ABC-type multidrug transport system, ATPase component
LNEOGEMI_04234	2.5e-245	ybhR	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	COG0842 ABC-type multidrug transport system, permease component
LNEOGEMI_04235	1e-147	ycfA	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_04236	1.1e-84	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Chalcone and stilbene synthases, N-terminal domain
LNEOGEMI_04237	1.26e-10	tlp	-	-	S	ko:K06434	-	ko00000	spore protein
LNEOGEMI_04239	1.04e-110	ltrC	3.1.3.27	-	I	ko:K01095	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Phosphatidylglycerophosphatase A
LNEOGEMI_04240	2.46e-114	-	-	-	-	-	-	-	-
LNEOGEMI_04241	1.7e-200	kbaY	4.1.2.13, 4.1.2.40	-	G	ko:K01624,ko:K08302	ko00010,ko00030,ko00051,ko00052,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00052,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway
LNEOGEMI_04242	9.17e-100	fruD	2.7.1.202	-	G	ko:K02768	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LNEOGEMI_04243	0.0	fruC	2.7.1.202	-	G	ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
LNEOGEMI_04244	4.4e-219	fruK-1	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	pfkB family carbohydrate kinase
LNEOGEMI_04245	2.19e-180	rpl	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
LNEOGEMI_04246	5.72e-207	XK27_03180	-	-	T	-	-	-	Belongs to the universal stress protein A family
LNEOGEMI_04248	1.63e-63	-	-	-	-	-	-	-	-
LNEOGEMI_04249	1.49e-74	-	-	-	-	-	-	-	-
LNEOGEMI_04250	7.08e-250	-	-	-	E	ko:K02055	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	COG0687 Spermidine putrescine-binding periplasmic protein
LNEOGEMI_04251	3.33e-213	-	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	nucleoside hydrolase
LNEOGEMI_04252	1.26e-178	-	-	-	E	ko:K02054,ko:K11071	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko02000	COG1176 ABC-type spermidine putrescine transport system, permease component I
LNEOGEMI_04253	3.46e-171	potC3	-	-	P	ko:K02053	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_04254	7.35e-249	potA11	3.6.3.30	-	P	ko:K02010,ko:K02052	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
LNEOGEMI_04255	4.62e-103	-	-	-	L	ko:K07491	-	ko00000	Transposase IS200 like
LNEOGEMI_04256	2.86e-210	ydhU	-	-	P	ko:K07217	-	ko00000	Catalase
LNEOGEMI_04258	6.37e-189	-	-	-	S	-	-	-	Nucleotidyltransferase domain
LNEOGEMI_04259	9.35e-161	bshB1	-	-	S	ko:K01463	-	ko00000,ko01000	proteins, LmbE homologs
LNEOGEMI_04260	2.23e-260	bshA	-	GT4	M	ko:K00754	-	ko00000,ko01000	N-acetyl-alpha-D-glucosaminyl L-malate synthase
LNEOGEMI_04261	7.27e-248	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
LNEOGEMI_04262	1.28e-227	birA	6.3.4.15	-	K	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
LNEOGEMI_04263	3.14e-191	panB	2.1.2.11	-	H	ko:K00606	ko00770,ko01100,ko01110,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate
LNEOGEMI_04264	1.64e-209	panC	6.3.2.1	-	H	ko:K01918	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
LNEOGEMI_04265	8.4e-85	panD	4.1.1.11	-	H	ko:K01579	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
LNEOGEMI_04266	1.01e-223	-	-	-	S	-	-	-	Tetratricopeptide repeat
LNEOGEMI_04267	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
LNEOGEMI_04268	1.96e-311	mtaD	3.5.4.28, 3.5.4.31	-	F	ko:K12960	ko00270,ko01100,map00270,map01100	ko00000,ko00001,ko01000	Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine
LNEOGEMI_04270	8.74e-32	ypmA	-	-	S	-	-	-	Protein of unknown function (DUF4264)
LNEOGEMI_04271	1.59e-104	ypmB	-	-	S	-	-	-	protein conserved in bacteria
LNEOGEMI_04272	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	asparaginyl-tRNA
LNEOGEMI_04273	1.38e-162	dnaD	-	-	L	ko:K02086	-	ko00000	DNA replication protein DnaD
LNEOGEMI_04274	1.45e-157	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LNEOGEMI_04275	0.0	ypbR	-	-	S	-	-	-	Dynamin family
LNEOGEMI_04276	1.2e-132	-	-	-	L	-	-	-	Integrase core domain
LNEOGEMI_04277	1.99e-85	-	-	-	L	-	-	-	Transposase
LNEOGEMI_04278	1.95e-173	-	-	-	L	-	-	-	IstB-like ATP binding protein
LNEOGEMI_04279	3.72e-202	-	-	-	E	ko:K02002	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Glycine betaine ABC transporter
LNEOGEMI_04280	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2254)
LNEOGEMI_04281	9.69e-222	-	-	-	P	ko:K07217	-	ko00000	Catalase
LNEOGEMI_04282	3.35e-214	yflN	-	-	S	-	-	-	COG0491 Zn-dependent hydrolases, including glyoxylases
LNEOGEMI_04283	3.84e-281	fdh	1.1.1.1, 1.1.1.284	-	E	ko:K00121	ko00010,ko00071,ko00350,ko00625,ko00626,ko00680,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko05204,map00010,map00071,map00350,map00625,map00626,map00680,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01200,map01220,map05204	ko00000,ko00001,ko01000	COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases
LNEOGEMI_04284	1.3e-218	scrR	-	-	K	ko:K03484	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
LNEOGEMI_04285	0.0	scrB	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
LNEOGEMI_04286	0.0	scrA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
LNEOGEMI_04287	3.84e-231	-	-	-	K	-	-	-	Transcriptional regulator
LNEOGEMI_04288	2.18e-157	fabG	1.1.1.100	-	S	ko:K00059,ko:K07124	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Belongs to the short-chain dehydrogenases reductases (SDR) family
LNEOGEMI_04289	9.22e-304	-	-	-	G	-	-	-	Tripartite ATP-independent periplasmic transporter, DctM component
LNEOGEMI_04290	3.3e-43	-	-	-	-	-	-	-	-
LNEOGEMI_04291	4.34e-151	-	4.1.3.17	-	H	ko:K10218	ko00362,ko00660,ko01120,map00362,map00660,map01120	ko00000,ko00001,ko01000	Methyltransferase
LNEOGEMI_04292	1.7e-199	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
LNEOGEMI_04293	5.87e-197	-	-	-	I	-	-	-	Domain of unknown function (DUF1932)
LNEOGEMI_04295	2.99e-89	puuR	-	-	K	-	-	-	sequence-specific DNA binding
LNEOGEMI_04296	2.23e-86	puuR	-	-	K	-	-	-	sequence-specific DNA binding
LNEOGEMI_04297	4.09e-233	-	-	-	V	-	-	-	Domain of unknown function (DUF3471)
LNEOGEMI_04298	8.89e-156	sapB	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC SapB transporter
LNEOGEMI_04299	6.37e-78	crcB	-	-	D	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LNEOGEMI_04300	7.27e-73	crcB	-	-	D	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LNEOGEMI_04301	8.25e-271	-	2.5.1.48	-	E	ko:K01739	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
LNEOGEMI_04312	5.33e-288	yuiF	-	-	S	ko:K07084	-	ko00000,ko02000	antiporter
LNEOGEMI_04313	1.81e-55	hbs	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
LNEOGEMI_04314	1.73e-182	-	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
LNEOGEMI_04315	1.06e-110	luxS	4.4.1.21	-	T	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
LNEOGEMI_04316	1.51e-34	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix domain
LNEOGEMI_04317	2.81e-74	yqjZ	-	-	S	-	-	-	enzyme involved in biosynthesis of extracellular polysaccharides
LNEOGEMI_04318	8.76e-67	-	-	-	K	-	-	-	Transcriptional regulator PadR-like family
LNEOGEMI_04319	1.24e-148	-	-	-	S	-	-	-	Protein of unknown function (DUF2812)
LNEOGEMI_04320	1.94e-244	-	-	-	EGP	-	-	-	MFS/sugar transport protein
LNEOGEMI_04321	5.16e-174	-	-	-	KT	-	-	-	Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding
LNEOGEMI_04322	2.78e-241	-	-	-	M	-	-	-	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
LNEOGEMI_04325	8.34e-221	-	-	-	L	-	-	-	Endonuclease/Exonuclease/phosphatase family
LNEOGEMI_04326	7.21e-101	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
LNEOGEMI_04329	1.96e-110	-	2.7.1.190	-	S	ko:K17910	-	ko00000,ko01000,ko01504	Protein of unknown function (DUF1679)
LNEOGEMI_04330	2.36e-61	-	-	-	O	-	-	-	Sap, sulfolipid-1-addressing protein
LNEOGEMI_04331	4.68e-158	-	-	-	K	ko:K13653	-	ko00000,ko03000	AraC family transcriptional regulator
LNEOGEMI_04332	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LNEOGEMI_04333	2.31e-175	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
LNEOGEMI_04334	2.95e-205	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_04335	1.87e-220	-	-	-	G	ko:K02025	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
LNEOGEMI_04336	0.0	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
LNEOGEMI_04337	1.98e-175	kipI	-	-	E	ko:K06351	-	ko00000	Allophanate hydrolase subunit 1
LNEOGEMI_04338	6.8e-227	kipA	-	-	E	ko:K06350	-	ko00000	Allophanate hydrolase subunit 2
LNEOGEMI_04339	2.25e-267	ycsG	-	-	P	-	-	-	COG1914 Mn2 and Fe2 transporters of the NRAMP family
LNEOGEMI_04340	7.95e-172	ycsF	-	-	S	ko:K07160	-	ko00000	Belongs to the UPF0271 (lamB) family
LNEOGEMI_04341	4.77e-12	-	-	-	-	-	-	-	-
LNEOGEMI_04342	8.24e-144	-	-	-	P	-	-	-	Pyridine nucleotide-disulphide oxidoreductase
LNEOGEMI_04343	7.32e-79	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
LNEOGEMI_04344	2.7e-145	ydgI	-	-	C	-	-	-	nitroreductase
LNEOGEMI_04345	0.0	-	-	-	K	ko:K03491	-	ko00000,ko03000	transcriptional regulator, MtlR
LNEOGEMI_04346	2.93e-201	-	4.1.2.13	-	G	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-bisphosphate aldolase class-II
LNEOGEMI_04347	0.0	-	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type)
LNEOGEMI_04348	1.59e-207	aadK	-	-	G	ko:K05593	-	ko00000,ko01000,ko01504	Streptomycin adenylyltransferase
LNEOGEMI_04349	4.11e-123	-	-	-	-	-	-	-	-
LNEOGEMI_04351	5.17e-36	-	-	-	-	-	-	-	-
LNEOGEMI_04354	0.0	nnrD	4.2.1.136, 5.1.99.6	-	G	ko:K17758,ko:K17759	-	ko00000,ko01000	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LNEOGEMI_04355	1.99e-216	yueF	-	-	S	-	-	-	transporter activity
LNEOGEMI_04356	7.51e-111	ftnA	1.16.3.2	-	P	ko:K02217	-	ko00000,ko01000	Iron-storage protein
LNEOGEMI_04357	1.03e-29	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix domain
LNEOGEMI_04358	3.62e-50	-	-	-	-	-	-	-	-
LNEOGEMI_04359	3.65e-259	-	-	-	L	ko:K07487	-	ko00000	Transposase domain (DUF772)
LNEOGEMI_04360	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter (permease)
LNEOGEMI_04361	4.05e-174	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
LNEOGEMI_04362	1.46e-158	rrp1	-	-	T	ko:K02483	-	ko00000,ko02022	Transcriptional regulatory protein, C terminal
LNEOGEMI_04363	1.11e-238	-	-	-	T	-	-	-	Histidine kinase-like ATPases
LNEOGEMI_04364	6.28e-36	-	-	-	S	-	-	-	Helix-turn-helix domain
LNEOGEMI_04365	1.14e-36	-	-	-	S	-	-	-	Domain of unknown function (DUF3173)
LNEOGEMI_04366	2.85e-88	-	-	-	-	-	-	-	-
LNEOGEMI_04368	5.87e-129	-	-	-	U	-	-	-	Relaxase/Mobilisation nuclease domain
LNEOGEMI_04369	4.8e-53	-	-	-	S	-	-	-	Bacterial mobilisation protein (MobC)
LNEOGEMI_04370	9.05e-48	-	-	-	-	-	-	-	-
LNEOGEMI_04371	4.05e-267	-	-	-	L	ko:K07487	-	ko00000	Transposase
LNEOGEMI_04372	1.75e-69	-	-	-	S	-	-	-	Short C-terminal domain
LNEOGEMI_04373	1.31e-268	-	1.1.1.38	-	C	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	ko00000,ko00001,ko01000	Malate dehydrogenase
LNEOGEMI_04374	1.28e-310	malP	-	-	C	ko:K11616	ko02020,map02020	ko00000,ko00001	COG3493 Na citrate symporter
LNEOGEMI_04375	8.29e-161	dcuR	-	-	T	ko:K02475,ko:K11615	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	COG4565 Response regulator of citrate malate metabolism
LNEOGEMI_04376	0.0	malK	2.7.13.3	-	T	ko:K02476,ko:K11614,ko:K11637	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Signal transduction histidine kinase regulating citrate malate metabolism
LNEOGEMI_04379	9.48e-204	-	-	-	K	-	-	-	Acetyltransferase (GNAT) family
LNEOGEMI_04380	1.82e-183	-	-	-	K	-	-	-	MerR family transcriptional regulator
LNEOGEMI_04381	5.18e-94	-	-	-	-	-	-	-	-
LNEOGEMI_04382	6.28e-231	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
LNEOGEMI_04383	6.5e-142	XK27_07680	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
LNEOGEMI_04384	9.27e-110	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
LNEOGEMI_04385	2.21e-26	yisL	-	-	S	-	-	-	UPF0344 protein
LNEOGEMI_04386	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	Type I restriction-modification system
LNEOGEMI_04387	4.93e-97	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	PFAM restriction modification system DNA specificity domain
LNEOGEMI_04388	1.67e-105	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
LNEOGEMI_04389	5.45e-112	yqeB	-	-	-	-	-	-	-
LNEOGEMI_04390	2.22e-83	-	-	-	S	ko:K07148	-	ko00000	Protein of unknown function (DUF418)
LNEOGEMI_04391	1.68e-184	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain