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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
DCGOIPII_00001	8.69e-185	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, phosphonate, periplasmic substrate-binding protein
DCGOIPII_00002	7.05e-219	degV1	-	-	S	-	-	-	DegV family
DCGOIPII_00003	1.07e-171	-	-	-	V	-	-	-	ABC transporter transmembrane region
DCGOIPII_00004	4.07e-214	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
DCGOIPII_00005	3.81e-18	-	-	-	S	-	-	-	CsbD-like
DCGOIPII_00006	4.18e-27	-	-	-	S	-	-	-	Transglycosylase associated protein
DCGOIPII_00007	3.35e-288	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
DCGOIPII_00008	2.03e-155	-	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
DCGOIPII_00011	5.45e-40	-	-	-	-	-	-	-	-
DCGOIPII_00013	2.14e-187	-	-	-	S	-	-	-	Putative ABC-transporter type IV
DCGOIPII_00014	9.25e-104	-	-	-	S	-	-	-	Cob(I)alamin adenosyltransferase
DCGOIPII_00015	1.49e-260	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
DCGOIPII_00017	1.08e-17	-	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
DCGOIPII_00018	1.64e-15	-	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
DCGOIPII_00019	3.49e-38	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
DCGOIPII_00020	5.07e-178	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
DCGOIPII_00021	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
DCGOIPII_00022	1.21e-223	ydbI	-	-	K	-	-	-	AI-2E family transporter
DCGOIPII_00023	5.95e-120	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
DCGOIPII_00024	7.15e-158	-	-	-	K	-	-	-	Psort location Cytoplasmic, score 8.87
DCGOIPII_00026	7.34e-36	lacF	2.7.1.196, 2.7.1.205, 2.7.1.207	-	G	ko:K02759,ko:K02786	ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIA subunit
DCGOIPII_00027	6.58e-31	pts15B	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS family porter, IIB component
DCGOIPII_00028	1.16e-150	-	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DCGOIPII_00029	3.47e-288	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
DCGOIPII_00030	6.33e-199	-	-	CE10	I	ko:K03929	-	ko00000,ko01000	Belongs to the type-B carboxylesterase lipase family
DCGOIPII_00031	2.86e-266	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 1 family
DCGOIPII_00032	3.37e-22	-	-	-	-	-	-	-	-
DCGOIPII_00033	7.43e-312	-	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
DCGOIPII_00034	1.28e-42	-	-	-	-	-	-	-	-
DCGOIPII_00035	2.97e-62	-	-	-	S	-	-	-	Bacteriocin helveticin-J
DCGOIPII_00036	1.37e-16	-	-	-	S	-	-	-	SLAP domain
DCGOIPII_00037	2.02e-58	-	-	-	-	-	-	-	-
DCGOIPII_00038	5e-175	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
DCGOIPII_00039	2.25e-166	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
DCGOIPII_00040	2.36e-223	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
DCGOIPII_00041	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
DCGOIPII_00042	2.32e-193	-	-	-	K	-	-	-	Helix-turn-helix domain
DCGOIPII_00043	1.98e-172	ysaA	3.1.3.5, 3.8.1.2	-	S	ko:K01560,ko:K07025,ko:K08723	ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
DCGOIPII_00044	5.21e-195	-	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
DCGOIPII_00045	1.92e-204	yvgN	-	-	C	-	-	-	Aldo keto reductase
DCGOIPII_00046	0.0	fusA1	-	-	J	-	-	-	elongation factor G
DCGOIPII_00047	3.85e-193	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	haloacid dehalogenase-like hydrolase
DCGOIPII_00048	9.38e-61	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
DCGOIPII_00049	9.26e-85	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
DCGOIPII_00050	9.62e-247	ldhA	1.1.1.28	-	C	ko:K03778,ko:K18347	ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01504	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DCGOIPII_00051	1.44e-07	-	-	-	S	-	-	-	YSIRK type signal peptide
DCGOIPII_00053	1.64e-200	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
DCGOIPII_00054	0.0	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
DCGOIPII_00055	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
DCGOIPII_00056	4.54e-259	pbpX	-	-	V	-	-	-	Beta-lactamase
DCGOIPII_00057	4.29e-289	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
DCGOIPII_00058	1.77e-93	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
DCGOIPII_00061	1.61e-12	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
DCGOIPII_00062	1.38e-107	-	-	-	J	-	-	-	FR47-like protein
DCGOIPII_00063	3.37e-50	-	-	-	S	-	-	-	Cytochrome B5
DCGOIPII_00064	3.92e-215	arbZ	-	-	I	-	-	-	Phosphate acyltransferases
DCGOIPII_00065	1.06e-232	-	-	-	M	-	-	-	Glycosyl transferase family 8
DCGOIPII_00066	4.02e-238	-	-	-	M	-	-	-	Glycosyl transferase family 8
DCGOIPII_00067	7.53e-203	arbx	-	-	M	-	-	-	Glycosyl transferase family 8
DCGOIPII_00068	3.58e-193	-	-	-	I	-	-	-	Acyl-transferase
DCGOIPII_00070	1.09e-46	-	-	-	-	-	-	-	-
DCGOIPII_00072	3.98e-169	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
DCGOIPII_00073	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
DCGOIPII_00074	0.0	yycH	-	-	S	-	-	-	YycH protein
DCGOIPII_00075	7.44e-192	yycI	-	-	S	-	-	-	YycH protein
DCGOIPII_00076	1.45e-189	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
DCGOIPII_00077	2.87e-227	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
DCGOIPII_00078	8.64e-107	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
DCGOIPII_00079	1.68e-44	-	-	-	G	-	-	-	Peptidase_C39 like family
DCGOIPII_00080	1.31e-208	-	-	-	M	-	-	-	NlpC/P60 family
DCGOIPII_00081	4.7e-115	-	-	-	G	-	-	-	Peptidase_C39 like family
DCGOIPII_00082	1.13e-202	pepI	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
DCGOIPII_00083	3.24e-112	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
DCGOIPII_00084	1.62e-309	-	-	-	S	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
DCGOIPII_00085	9.46e-210	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
DCGOIPII_00086	6.68e-207	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
DCGOIPII_00087	2.88e-125	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
DCGOIPII_00088	2.64e-246	ysdE	-	-	P	-	-	-	Citrate transporter
DCGOIPII_00089	6.75e-92	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
DCGOIPII_00090	0.0	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
DCGOIPII_00091	9.69e-25	-	-	-	-	-	-	-	-
DCGOIPII_00092	1.5e-166	-	-	-	-	-	-	-	-
DCGOIPII_00093	2.77e-10	-	-	-	-	-	-	-	-
DCGOIPII_00094	1.34e-273	-	-	-	M	-	-	-	Glycosyl transferase
DCGOIPII_00095	5.22e-225	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
DCGOIPII_00096	1.11e-154	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
DCGOIPII_00097	2.32e-202	-	-	-	L	-	-	-	HNH nucleases
DCGOIPII_00098	1.54e-186	yhaH	-	-	S	-	-	-	Protein of unknown function (DUF805)
DCGOIPII_00099	9.02e-177	glnQ	-	-	E	ko:K17076	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
DCGOIPII_00100	0.0	XK27_05795	-	-	P	ko:K17073,ko:K17074	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
DCGOIPII_00101	5.74e-155	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
DCGOIPII_00102	3.78e-85	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
DCGOIPII_00103	4.87e-166	terC	-	-	P	-	-	-	Integral membrane protein TerC family
DCGOIPII_00104	5.09e-119	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	6-O-methylguanine DNA methyltransferase, DNA binding domain
DCGOIPII_00105	3.56e-169	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
DCGOIPII_00106	5.61e-113	-	-	-	-	-	-	-	-
DCGOIPII_00107	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DCGOIPII_00108	1.51e-233	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
DCGOIPII_00109	1.2e-188	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DCGOIPII_00110	9.18e-187	-	-	-	S	-	-	-	Protein of unknown function (DUF1002)
DCGOIPII_00111	1.34e-192	epsV	-	-	S	-	-	-	glycosyl transferase family 2
DCGOIPII_00112	2.88e-152	-	-	-	S	-	-	-	Alpha/beta hydrolase family
DCGOIPII_00113	4.82e-188	-	-	-	K	-	-	-	Helix-turn-helix domain
DCGOIPII_00115	2.7e-79	-	-	-	-	-	-	-	-
DCGOIPII_00118	7.8e-18	-	-	-	S	-	-	-	YcaO cyclodehydratase, ATP-ad Mg2+-binding
DCGOIPII_00119	3.02e-276	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
DCGOIPII_00120	9.42e-122	noxC	1.5.1.39	-	C	ko:K19286	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	coenzyme F420-1:gamma-L-glutamate ligase activity
DCGOIPII_00121	9.03e-46	noxC	1.5.1.39	-	C	ko:K19286	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	coenzyme F420-1:gamma-L-glutamate ligase activity
DCGOIPII_00122	8.73e-234	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DCGOIPII_00123	3.41e-160	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
DCGOIPII_00124	1.11e-177	-	-	-	-	-	-	-	-
DCGOIPII_00125	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
DCGOIPII_00126	5.01e-171	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
DCGOIPII_00127	7.36e-291	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
DCGOIPII_00128	3.96e-253	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
DCGOIPII_00129	1.72e-164	-	-	-	-	-	-	-	-
DCGOIPII_00130	9.78e-258	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
DCGOIPII_00131	7.8e-167	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
DCGOIPII_00132	9.9e-203	-	-	-	I	-	-	-	alpha/beta hydrolase fold
DCGOIPII_00133	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 31 family
DCGOIPII_00134	8.82e-277	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
DCGOIPII_00135	0.0	-	-	-	S	ko:K06921	-	ko00000	Archaea bacterial proteins of unknown function
DCGOIPII_00137	3.49e-28	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
DCGOIPII_00138	4.83e-117	ntd	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside
DCGOIPII_00139	6.77e-116	-	2.7.1.200, 2.7.1.204	-	G	ko:K02773,ko:K20112	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
DCGOIPII_00140	1.02e-190	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
DCGOIPII_00141	7.64e-110	usp5	-	-	T	-	-	-	universal stress protein
DCGOIPII_00142	4.65e-206	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphonate ABC transporter
DCGOIPII_00143	1.67e-175	phnC	3.6.3.28	-	P	ko:K02041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
DCGOIPII_00144	1.38e-162	phnB	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
DCGOIPII_00145	7.44e-190	-	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
DCGOIPII_00146	1.38e-138	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
DCGOIPII_00147	3e-108	-	-	-	-	-	-	-	-
DCGOIPII_00148	0.0	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
DCGOIPII_00149	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
DCGOIPII_00150	0.0	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
DCGOIPII_00151	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Ribonucleoside-triphosphate reductase
DCGOIPII_00152	1.35e-180	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DCGOIPII_00153	1.69e-132	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
DCGOIPII_00154	4.42e-292	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
DCGOIPII_00155	1.98e-278	yqjV	-	-	EGP	-	-	-	Major Facilitator Superfamily
DCGOIPII_00156	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
DCGOIPII_00157	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
DCGOIPII_00158	9.69e-99	-	-	-	-	-	-	-	-
DCGOIPII_00159	1.03e-84	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
DCGOIPII_00160	2.77e-25	-	-	-	-	-	-	-	-
DCGOIPII_00161	1.21e-40	-	-	-	-	-	-	-	-
DCGOIPII_00162	2.38e-51	-	-	-	S	-	-	-	Protein of unknown function (DUF2922)
DCGOIPII_00163	3.04e-158	-	-	-	S	-	-	-	SLAP domain
DCGOIPII_00164	1.28e-94	-	-	-	K	-	-	-	DNA-templated transcription, initiation
DCGOIPII_00166	2.02e-75	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
DCGOIPII_00167	2.46e-29	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
DCGOIPII_00168	1.07e-164	-	-	-	S	-	-	-	SLAP domain
DCGOIPII_00170	2.09e-286	-	-	-	NU	-	-	-	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
DCGOIPII_00171	2.98e-231	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
DCGOIPII_00172	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
DCGOIPII_00173	3.5e-138	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
DCGOIPII_00174	1.68e-207	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
DCGOIPII_00175	8.4e-170	-	-	-	-	-	-	-	-
DCGOIPII_00176	1.72e-149	-	-	-	-	-	-	-	-
DCGOIPII_00177	9.1e-171	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DCGOIPII_00178	3.12e-129	-	-	-	G	-	-	-	Aldose 1-epimerase
DCGOIPII_00179	1.69e-257	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
DCGOIPII_00180	1.78e-146	plsY1	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
DCGOIPII_00181	0.0	XK27_08315	-	-	M	-	-	-	Sulfatase
DCGOIPII_00182	0.0	-	-	-	S	-	-	-	Fibronectin type III domain
DCGOIPII_00183	1.27e-309	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
DCGOIPII_00184	1.14e-71	-	-	-	-	-	-	-	-
DCGOIPII_00186	0.0	pepC2	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
DCGOIPII_00187	3.06e-158	ypgQ	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
DCGOIPII_00188	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
DCGOIPII_00189	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
DCGOIPII_00190	4.39e-267	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
DCGOIPII_00191	1.91e-191	oppB	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DCGOIPII_00192	6.71e-241	oppC	-	-	EP	ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DCGOIPII_00193	1.49e-253	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
DCGOIPII_00194	6.54e-222	oppF	-	-	P	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
DCGOIPII_00195	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
DCGOIPII_00196	1.97e-92	hsp	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
DCGOIPII_00197	5.69e-100	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
DCGOIPII_00198	1.43e-144	-	-	-	-	-	-	-	-
DCGOIPII_00200	2.02e-144	-	-	-	E	-	-	-	Belongs to the SOS response-associated peptidase family
DCGOIPII_00201	4.07e-245	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
DCGOIPII_00202	6.56e-115	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	MafB19-like deaminase
DCGOIPII_00203	5.34e-134	-	-	-	S	ko:K06872	-	ko00000	TPM domain
DCGOIPII_00204	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
DCGOIPII_00207	3.95e-54	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
DCGOIPII_00208	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DCGOIPII_00209	9.1e-188	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
DCGOIPII_00210	5.17e-129	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
DCGOIPII_00211	2.72e-204	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
DCGOIPII_00212	1.72e-53	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
DCGOIPII_00213	8.69e-192	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
DCGOIPII_00214	7.68e-309	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
DCGOIPII_00215	5.52e-113	-	-	-	-	-	-	-	-
DCGOIPII_00216	0.0	-	-	-	S	-	-	-	SLAP domain
DCGOIPII_00217	1.27e-224	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DCGOIPII_00218	6.48e-109	-	-	-	GK	-	-	-	ROK family
DCGOIPII_00219	2.89e-88	-	-	-	GK	-	-	-	ROK family
DCGOIPII_00220	7.24e-58	-	-	-	-	-	-	-	-
DCGOIPII_00221	0.0	-	-	-	S	ko:K06885	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
DCGOIPII_00222	1.75e-89	-	-	-	S	-	-	-	Domain of unknown function (DUF1934)
DCGOIPII_00223	2.42e-96	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
DCGOIPII_00224	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
DCGOIPII_00225	1.89e-312	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DCGOIPII_00226	1.26e-97	-	-	-	K	-	-	-	acetyltransferase
DCGOIPII_00227	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
DCGOIPII_00228	9.15e-200	msmR	-	-	K	-	-	-	AraC-like ligand binding domain
DCGOIPII_00229	2.26e-149	-	-	-	L	-	-	-	Resolvase, N-terminal
DCGOIPII_00230	0.0	-	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
DCGOIPII_00231	8.91e-289	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
DCGOIPII_00232	2.87e-137	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
DCGOIPII_00233	4.38e-54	-	-	-	K	-	-	-	Helix-turn-helix
DCGOIPII_00234	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
DCGOIPII_00236	1.89e-129	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
DCGOIPII_00237	4.03e-103	-	-	-	M	-	-	-	Rib/alpha-like repeat
DCGOIPII_00238	1.82e-05	-	-	-	-	-	-	-	-
DCGOIPII_00240	4.85e-75	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
DCGOIPII_00241	6.77e-39	yjdF3	-	-	S	-	-	-	Protein of unknown function (DUF2992)
DCGOIPII_00242	1.6e-79	ydeP	-	-	K	-	-	-	Transcriptional regulator, HxlR family
DCGOIPII_00243	1.38e-252	qor	1.1.1.1, 1.6.5.5	-	C	ko:K00001,ko:K00344	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
DCGOIPII_00244	7.87e-126	ogt	2.1.1.63	-	L	ko:K00567	-	ko00000,ko01000,ko03400	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DCGOIPII_00245	3.74e-125	-	-	-	-	-	-	-	-
DCGOIPII_00246	4.86e-182	-	-	-	P	-	-	-	Voltage gated chloride channel
DCGOIPII_00247	3.59e-240	-	-	-	C	-	-	-	FMN-dependent dehydrogenase
DCGOIPII_00248	1.23e-68	-	-	-	-	-	-	-	-
DCGOIPII_00249	1.17e-56	-	-	-	-	-	-	-	-
DCGOIPII_00250	3.28e-296	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
DCGOIPII_00251	0.0	-	-	-	E	-	-	-	amino acid
DCGOIPII_00252	2.72e-199	yhaX	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
DCGOIPII_00253	0.0	dexB	3.2.1.70	-	G	ko:K01215	-	ko00000,ko01000	Alpha amylase, catalytic domain protein
DCGOIPII_00254	1.07e-52	rpmE	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
DCGOIPII_00255	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
DCGOIPII_00256	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
DCGOIPII_00257	9.39e-80	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
DCGOIPII_00258	1.62e-276	alr	5.1.1.1, 5.1.1.5	-	E	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DCGOIPII_00259	1.23e-166	-	-	-	S	-	-	-	(CBS) domain
DCGOIPII_00260	2.93e-234	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
DCGOIPII_00261	3.26e-135	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
DCGOIPII_00262	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DCGOIPII_00263	7.32e-46	yabO	-	-	J	-	-	-	S4 domain protein
DCGOIPII_00264	7.52e-78	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
DCGOIPII_00265	3.95e-82	-	-	-	J	ko:K07571	-	ko00000	S1 RNA binding domain
DCGOIPII_00266	5.55e-307	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
DCGOIPII_00267	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DCGOIPII_00268	1.37e-214	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
DCGOIPII_00269	1.67e-249	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DCGOIPII_00270	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
DCGOIPII_00273	0.0	XK27_00340	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
DCGOIPII_00277	1.3e-104	ytsP	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
DCGOIPII_00278	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
DCGOIPII_00279	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DCGOIPII_00280	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DCGOIPII_00281	3.35e-119	comC	3.4.23.43	-	NOU	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	Bacterial Peptidase A24 N-terminal domain
DCGOIPII_00282	1.47e-91	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
DCGOIPII_00283	6.89e-107	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
DCGOIPII_00284	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
DCGOIPII_00285	6.34e-66	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
DCGOIPII_00286	6.64e-146	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
DCGOIPII_00287	4.68e-138	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
DCGOIPII_00288	1.14e-63	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
DCGOIPII_00289	4.01e-198	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
DCGOIPII_00290	1.14e-62	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
DCGOIPII_00291	9.07e-73	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
DCGOIPII_00292	8.7e-157	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
DCGOIPII_00293	1.66e-100	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
DCGOIPII_00294	1.45e-34	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
DCGOIPII_00295	1.56e-55	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
DCGOIPII_00296	3.62e-79	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
DCGOIPII_00297	3.03e-44	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
DCGOIPII_00298	1.23e-123	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
DCGOIPII_00299	1e-39	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DCGOIPII_00300	7.94e-90	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
DCGOIPII_00301	7.18e-121	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
DCGOIPII_00302	2.8e-72	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
DCGOIPII_00303	3.73e-110	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
DCGOIPII_00304	2.22e-34	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
DCGOIPII_00305	4.95e-93	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
DCGOIPII_00306	1.25e-301	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
DCGOIPII_00307	3.7e-155	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
DCGOIPII_00308	3.13e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
DCGOIPII_00309	1.89e-21	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
DCGOIPII_00310	2.07e-73	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
DCGOIPII_00311	3.82e-82	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
DCGOIPII_00312	3.62e-218	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DCGOIPII_00313	2.23e-80	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
DCGOIPII_00314	1.02e-198	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DCGOIPII_00315	3.87e-202	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DCGOIPII_00316	1.13e-177	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DCGOIPII_00317	8.77e-194	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
DCGOIPII_00318	3.22e-103	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
DCGOIPII_00319	1.18e-86	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
DCGOIPII_00320	4.59e-208	-	-	-	M	-	-	-	Belongs to the glycosyl hydrolase 28 family
DCGOIPII_00321	1.47e-100	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
DCGOIPII_00322	4.76e-137	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
DCGOIPII_00323	2.7e-153	-	3.8.1.2	-	S	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
DCGOIPII_00324	2.02e-169	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
DCGOIPII_00325	3.16e-160	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
DCGOIPII_00326	5.08e-207	-	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
DCGOIPII_00327	2.42e-33	-	-	-	-	-	-	-	-
DCGOIPII_00328	3.43e-164	gpmA1	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DCGOIPII_00329	1.99e-235	-	-	-	S	-	-	-	AAA domain
DCGOIPII_00330	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
DCGOIPII_00331	7.79e-70	-	-	-	-	-	-	-	-
DCGOIPII_00332	5.22e-131	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
DCGOIPII_00333	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
DCGOIPII_00334	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DCGOIPII_00335	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
DCGOIPII_00336	8.55e-99	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
DCGOIPII_00337	2.21e-177	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DCGOIPII_00338	3.81e-123	comX	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	Belongs to the sigma-70 factor family
DCGOIPII_00339	1.19e-45	-	-	-	-	-	-	-	-
DCGOIPII_00340	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
DCGOIPII_00341	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
DCGOIPII_00342	3.73e-33	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
DCGOIPII_00343	3.01e-131	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
DCGOIPII_00344	3.82e-90	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
DCGOIPII_00345	1.05e-160	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
DCGOIPII_00346	5.48e-201	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
DCGOIPII_00347	1.19e-212	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
DCGOIPII_00348	1.82e-198	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
DCGOIPII_00349	5.24e-187	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
DCGOIPII_00350	1.33e-178	pstB1	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
DCGOIPII_00351	3.38e-150	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
DCGOIPII_00352	2.28e-117	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
DCGOIPII_00354	3.72e-111	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
DCGOIPII_00355	1.88e-71	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
DCGOIPII_00356	1.13e-189	-	2.1.1.172	-	J	ko:K00564,ko:K10716	-	ko00000,ko01000,ko02000,ko03009	Ion channel
DCGOIPII_00357	5.31e-149	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
DCGOIPII_00358	6.15e-36	-	-	-	-	-	-	-	-
DCGOIPII_00359	1.08e-117	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
DCGOIPII_00360	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DCGOIPII_00361	1.12e-106	-	-	-	M	-	-	-	family 8
DCGOIPII_00362	1.55e-68	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
DCGOIPII_00363	9.21e-142	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
DCGOIPII_00364	1.18e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2508)
DCGOIPII_00365	2.32e-146	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
DCGOIPII_00366	1.58e-70	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
DCGOIPII_00367	3.28e-196	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
DCGOIPII_00368	1.4e-80	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
DCGOIPII_00369	8.75e-200	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
DCGOIPII_00370	2.12e-167	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
DCGOIPII_00371	3.7e-112	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
DCGOIPII_00372	1.89e-170	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
DCGOIPII_00373	4.59e-124	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
DCGOIPII_00374	1.31e-245	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
DCGOIPII_00375	4.02e-08	-	-	-	D	-	-	-	Domain of Unknown Function (DUF1542)
DCGOIPII_00376	1.47e-65	-	-	-	M	-	-	-	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
DCGOIPII_00377	1.67e-109	bbsF_1	2.8.3.19	-	C	ko:K18702	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
DCGOIPII_00378	2.32e-158	-	-	-	EGP	-	-	-	Transmembrane secretion effector
DCGOIPII_00379	1.21e-198	frc	2.8.3.16	-	C	ko:K07749	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
DCGOIPII_00380	1.37e-224	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
DCGOIPII_00381	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
DCGOIPII_00382	8.74e-146	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
DCGOIPII_00383	1.29e-235	scrR	-	-	K	ko:K03484	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
DCGOIPII_00384	0.0	scrB	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
DCGOIPII_00385	0.0	scrA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
DCGOIPII_00386	8.7e-231	-	-	-	M	-	-	-	CHAP domain
DCGOIPII_00387	1.13e-101	-	-	-	-	-	-	-	-
DCGOIPII_00388	1.06e-58	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
DCGOIPII_00389	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
DCGOIPII_00390	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
DCGOIPII_00391	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
DCGOIPII_00392	1.12e-131	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
DCGOIPII_00393	4.87e-238	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
DCGOIPII_00394	7.58e-69	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
DCGOIPII_00395	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DCGOIPII_00396	1.51e-268	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DCGOIPII_00397	5.46e-232	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
DCGOIPII_00398	1.32e-305	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
DCGOIPII_00399	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DCGOIPII_00400	5.32e-57	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
DCGOIPII_00401	9.37e-96	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
DCGOIPII_00402	4.77e-63	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
DCGOIPII_00403	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
DCGOIPII_00404	5.37e-72	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
DCGOIPII_00405	2.34e-76	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
DCGOIPII_00406	5.62e-95	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
DCGOIPII_00407	7.14e-187	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
DCGOIPII_00408	4.9e-145	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
DCGOIPII_00409	4.16e-38	-	-	-	-	-	-	-	-
DCGOIPII_00410	1.43e-132	-	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
DCGOIPII_00411	8.67e-175	-	-	-	-	-	-	-	-
DCGOIPII_00412	9.1e-126	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
DCGOIPII_00413	6.08e-187	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
DCGOIPII_00414	2.96e-23	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
DCGOIPII_00415	3.09e-71	-	-	-	-	-	-	-	-
DCGOIPII_00416	1.13e-272	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
DCGOIPII_00417	1.23e-231	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
DCGOIPII_00418	0.0	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
DCGOIPII_00419	9.89e-74	-	-	-	-	-	-	-	-
DCGOIPII_00420	0.0	sasH	3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45	-	F	ko:K01081,ko:K01119,ko:K07004,ko:K08693,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
DCGOIPII_00421	6.48e-136	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
DCGOIPII_00422	1.83e-183	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
DCGOIPII_00423	2.15e-137	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
DCGOIPII_00424	9.8e-150	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
DCGOIPII_00425	7.49e-236	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
DCGOIPII_00453	1.35e-283	-	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyl transferase 4-like domain
DCGOIPII_00454	9.03e-257	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
DCGOIPII_00455	8.57e-227	mprF	-	-	S	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
DCGOIPII_00456	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
DCGOIPII_00457	1.3e-40	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
DCGOIPII_00458	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
DCGOIPII_00459	1.58e-101	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
DCGOIPII_00462	7.24e-209	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
DCGOIPII_00465	8.87e-288	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
DCGOIPII_00466	0.0	mdr	-	-	EGP	-	-	-	Major Facilitator
DCGOIPII_00467	0.0	pts32BC	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
DCGOIPII_00468	3.02e-199	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
DCGOIPII_00469	2.23e-204	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
DCGOIPII_00470	4.07e-25	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
DCGOIPII_00471	7.39e-191	-	-	-	K	-	-	-	rpiR family
DCGOIPII_00472	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
DCGOIPII_00473	2.52e-238	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome d ubiquinol oxidase subunit II
DCGOIPII_00474	0.0	cydC	-	-	CO	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
DCGOIPII_00475	0.0	cydD	-	-	CO	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
DCGOIPII_00476	7.15e-165	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
DCGOIPII_00477	4.81e-227	hepT	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
DCGOIPII_00478	1.77e-207	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
DCGOIPII_00479	7.4e-295	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
DCGOIPII_00480	5.32e-51	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
DCGOIPII_00482	1.88e-109	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
DCGOIPII_00483	1.36e-215	-	-	-	K	-	-	-	LysR substrate binding domain
DCGOIPII_00484	3.42e-157	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
DCGOIPII_00485	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
DCGOIPII_00486	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
DCGOIPII_00487	2.97e-64	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain
DCGOIPII_00489	7.39e-311	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
DCGOIPII_00490	5.47e-198	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
DCGOIPII_00491	4.81e-130	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
DCGOIPII_00492	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
DCGOIPII_00493	4.24e-217	fba	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-1,6-bisphosphate aldolase, class II
DCGOIPII_00494	6.37e-125	-	-	-	L	-	-	-	NUDIX domain
DCGOIPII_00495	5.56e-101	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	UbiA prenyltransferase family
DCGOIPII_00497	2.39e-60	-	-	-	-	-	-	-	-
DCGOIPII_00498	6.1e-45	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
DCGOIPII_00499	1.28e-226	-	-	-	S	-	-	-	PFAM Archaeal ATPase
DCGOIPII_00500	4.98e-250	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
DCGOIPII_00501	2.86e-163	citG	2.4.2.52	-	H	ko:K05966	ko02020,map02020	ko00000,ko00001,ko01000	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
DCGOIPII_00502	7.21e-239	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
DCGOIPII_00503	9.44e-183	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
DCGOIPII_00504	1.84e-139	-	-	-	G	-	-	-	Phosphoglycerate mutase family
DCGOIPII_00505	0.0	pps	2.7.9.2	-	H	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
DCGOIPII_00506	1.41e-206	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
DCGOIPII_00507	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
DCGOIPII_00508	6.93e-72	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
DCGOIPII_00509	1.68e-295	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
DCGOIPII_00510	0.0	yhaN	-	-	L	-	-	-	AAA domain
DCGOIPII_00511	3.19e-239	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
DCGOIPII_00513	9.67e-33	-	-	-	S	-	-	-	Domain of unknown function DUF1829
DCGOIPII_00514	0.0	-	-	-	-	-	-	-	-
DCGOIPII_00515	1.93e-96	eda	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	KDPG and KHG aldolase
DCGOIPII_00516	4.43e-196	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
DCGOIPII_00517	1.2e-41	-	-	-	-	-	-	-	-
DCGOIPII_00518	1.61e-101	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
DCGOIPII_00519	9.02e-175	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
DCGOIPII_00520	1.15e-281	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
DCGOIPII_00521	3.58e-162	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
DCGOIPII_00523	1.35e-71	ytpP	-	-	CO	-	-	-	Thioredoxin
DCGOIPII_00524	8.78e-157	XK27_10290	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
DCGOIPII_00525	4.3e-312	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
DCGOIPII_00526	1.21e-301	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
DCGOIPII_00527	7.95e-224	-	-	-	S	-	-	-	SLAP domain
DCGOIPII_00528	0.0	-	-	-	M	-	-	-	Peptidase family M1 domain
DCGOIPII_00529	1.31e-243	-	-	-	S	-	-	-	Bacteriocin helveticin-J
DCGOIPII_00530	1.33e-67	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
DCGOIPII_00531	1.71e-186	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
DCGOIPII_00532	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DCGOIPII_00533	7.81e-199	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
DCGOIPII_00534	2.16e-136	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DCGOIPII_00535	3.7e-106	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
DCGOIPII_00536	0.0	dnaB2	-	-	L	ko:K03346	-	ko00000,ko03032	Replication initiation and membrane attachment
DCGOIPII_00537	2.65e-215	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
DCGOIPII_00538	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DCGOIPII_00539	6.24e-210	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
DCGOIPII_00540	2.5e-92	-	-	-	-	-	-	-	-
DCGOIPII_00541	1.3e-78	-	-	-	K	-	-	-	LytTr DNA-binding domain
DCGOIPII_00542	5.3e-44	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
DCGOIPII_00543	4.5e-99	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
DCGOIPII_00544	2.63e-94	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
DCGOIPII_00545	7.95e-37	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
DCGOIPII_00546	8.69e-76	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
DCGOIPII_00547	1.06e-192	add	3.5.4.2, 3.5.4.4	-	F	ko:K01488,ko:K02029,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
DCGOIPII_00548	1.44e-110	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
DCGOIPII_00549	3.39e-254	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
DCGOIPII_00550	8.77e-158	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
DCGOIPII_00551	9.22e-141	yqeK	-	-	H	-	-	-	Hydrolase, HD family
DCGOIPII_00552	4.19e-77	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
DCGOIPII_00553	1.39e-276	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
DCGOIPII_00554	5.37e-126	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
DCGOIPII_00555	7.09e-163	csrR	-	-	K	-	-	-	response regulator
DCGOIPII_00556	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
DCGOIPII_00557	1.16e-23	-	-	-	-	-	-	-	-
DCGOIPII_00558	2.9e-140	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
DCGOIPII_00559	7.24e-284	-	-	-	S	-	-	-	SLAP domain
DCGOIPII_00560	2.47e-112	-	-	-	S	ko:K19055	-	ko00000,ko01000,ko03016	Aminoacyl-tRNA editing domain
DCGOIPII_00561	3.54e-209	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
DCGOIPII_00562	5.58e-59	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
DCGOIPII_00563	6.53e-172	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DCGOIPII_00564	1.47e-208	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
DCGOIPII_00565	3.71e-76	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
DCGOIPII_00567	4.25e-138	glnP9	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter, permease protein
DCGOIPII_00568	2.78e-148	glnP7	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter permease
DCGOIPII_00569	2.65e-23	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
DCGOIPII_00570	4.85e-103	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
DCGOIPII_00571	4e-201	cjaA	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
DCGOIPII_00572	2.9e-254	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
DCGOIPII_00573	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
DCGOIPII_00574	2.55e-94	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
DCGOIPII_00575	8.21e-215	ldh3	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	lactate/malate dehydrogenase, alpha/beta C-terminal domain
DCGOIPII_00576	4.52e-202	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
DCGOIPII_00577	1.05e-33	-	-	-	-	-	-	-	-
DCGOIPII_00578	0.0	sufI	-	-	Q	-	-	-	Multicopper oxidase
DCGOIPII_00579	1.42e-140	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
DCGOIPII_00580	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
DCGOIPII_00581	7.11e-295	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
DCGOIPII_00582	1.75e-313	-	-	-	S	ko:K12941	-	ko00000,ko01002	Peptidase dimerisation domain
DCGOIPII_00583	8.39e-172	-	-	-	S	-	-	-	Protein of unknown function (DUF3100)
DCGOIPII_00584	2.87e-107	-	-	-	S	-	-	-	An automated process has identified a potential problem with this gene model
DCGOIPII_00585	4.34e-64	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
DCGOIPII_00586	3.04e-163	-	-	-	S	-	-	-	SLAP domain
DCGOIPII_00587	8.29e-119	-	-	-	-	-	-	-	-
DCGOIPII_00589	2.11e-160	-	-	-	M	ko:K14193	ko05150,map05150	ko00000,ko00001	Iron Transport-associated domain
DCGOIPII_00590	5.92e-203	isdE	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
DCGOIPII_00591	1.39e-204	isdF	-	-	U	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DCGOIPII_00592	8.64e-178	-	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	abc transporter atp-binding protein
DCGOIPII_00593	2.22e-60	hupB2	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
DCGOIPII_00594	9.55e-70	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	Bacterial toxin of type II toxin-antitoxin system, YafQ
DCGOIPII_00595	5.46e-51	-	-	-	S	ko:K07473	-	ko00000,ko02048	RelB antitoxin
DCGOIPII_00596	7.04e-218	-	-	-	G	-	-	-	BadF/BadG/BcrA/BcrD ATPase family
DCGOIPII_00597	0.0	-	-	-	S	-	-	-	membrane
DCGOIPII_00598	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
DCGOIPII_00599	6.25e-29	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
DCGOIPII_00600	1.94e-126	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DCGOIPII_00601	7.66e-153	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Rhomboid family
DCGOIPII_00602	1e-47	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
DCGOIPII_00603	4.95e-89	yqhL	-	-	P	-	-	-	Rhodanese-like protein
DCGOIPII_00604	8.08e-218	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
DCGOIPII_00605	5.63e-284	ynbB	-	-	P	-	-	-	aluminum resistance
DCGOIPII_00606	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
DCGOIPII_00607	2.03e-220	-	-	-	-	-	-	-	-
DCGOIPII_00608	3.46e-204	-	-	-	-	-	-	-	-
DCGOIPII_00609	2.79e-19	-	-	-	S	-	-	-	HicA toxin of bacterial toxin-antitoxin,
DCGOIPII_00610	1.92e-42	-	-	-	S	-	-	-	protein encoded in hypervariable junctions of pilus gene clusters
DCGOIPII_00612	6.79e-45	-	-	-	-	-	-	-	-
DCGOIPII_00613	3.7e-281	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
DCGOIPII_00614	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
DCGOIPII_00615	1.57e-84	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
DCGOIPII_00616	7.97e-156	nanA	4.1.3.3	-	EM	ko:K01639	ko00520,map00520	ko00000,ko00001,ko01000	Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
DCGOIPII_00617	7.23e-113	nanK	-	-	GK	-	-	-	ROK family
DCGOIPII_00618	3.74e-70	-	-	-	G	-	-	-	Xylose isomerase domain protein TIM barrel
DCGOIPII_00619	1.48e-166	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
DCGOIPII_00620	1.07e-277	-	-	-	E	ko:K03307	-	ko00000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DCGOIPII_00621	4.82e-136	cah	3.1.1.41	-	Q	ko:K01060	ko00311,ko01130,map00311,map01130	ko00000,ko00001,ko01000	Acetyl xylan esterase (AXE1)
DCGOIPII_00622	3.42e-141	nanE	5.1.3.9	-	G	ko:K01788	ko00520,map00520	ko00000,ko00001,ko01000	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
DCGOIPII_00623	6.7e-157	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
DCGOIPII_00624	2.06e-134	-	-	-	S	-	-	-	Alpha/beta hydrolase family
DCGOIPII_00625	3.42e-20	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
DCGOIPII_00626	0.0	prtB	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
DCGOIPII_00627	2.1e-222	dhaK	2.7.1.121	-	G	ko:K05878	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak1 domain
DCGOIPII_00628	1.98e-120	dhaL	2.7.1.121	-	S	ko:K05879	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak2
DCGOIPII_00629	4.92e-73	dhaM	2.7.1.121	-	S	ko:K05881	ko00561,map00561	ko00000,ko00001,ko01000,ko02000	PTS system fructose IIA component
DCGOIPII_00630	2.57e-159	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
DCGOIPII_00631	4.71e-239	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
DCGOIPII_00632	5.9e-183	lacM	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
DCGOIPII_00633	0.0	lacL	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
DCGOIPII_00634	1.22e-209	lacR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
DCGOIPII_00635	0.0	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
DCGOIPII_00636	0.0	lacZ	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	-beta-galactosidase
DCGOIPII_00637	3.56e-281	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
DCGOIPII_00638	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
DCGOIPII_00639	3.94e-252	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
DCGOIPII_00640	6.13e-48	-	-	-	-	-	-	-	-
DCGOIPII_00641	1.14e-208	-	-	-	K	ko:K03484	-	ko00000,ko03000	Periplasmic binding protein domain
DCGOIPII_00642	1.36e-303	msmE	-	-	G	ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
DCGOIPII_00643	1.7e-201	msmF	-	-	P	ko:K10118	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
DCGOIPII_00644	6.16e-197	-	-	-	P	ko:K10119	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
DCGOIPII_00645	7.02e-268	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
DCGOIPII_00646	0.0	melA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
DCGOIPII_00647	0.0	gtfA	2.4.1.7	GH13	G	ko:K00690	ko00500,map00500	ko00000,ko00001,ko01000	Sucrose glucosyltransferase
DCGOIPII_00648	6.69e-144	-	-	-	T	-	-	-	Region found in RelA / SpoT proteins
DCGOIPII_00649	7.52e-136	dltr	-	-	K	-	-	-	response regulator
DCGOIPII_00650	4.53e-301	sptS	-	-	T	-	-	-	Histidine kinase
DCGOIPII_00651	5.78e-268	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
DCGOIPII_00652	3.22e-90	-	-	-	O	-	-	-	OsmC-like protein
DCGOIPII_00653	9.13e-69	yhaH	-	-	S	-	-	-	Protein of unknown function (DUF805)
DCGOIPII_00654	5.03e-116	-	-	-	-	-	-	-	-
DCGOIPII_00655	0.0	-	-	-	-	-	-	-	-
DCGOIPII_00657	2.64e-60	-	-	-	S	-	-	-	Fic/DOC family
DCGOIPII_00658	0.0	potE	-	-	E	-	-	-	Amino Acid
DCGOIPII_00659	2.44e-285	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DCGOIPII_00660	6.07e-311	lctO	1.13.12.4	-	C	ko:K00467,ko:K10530	ko00620,map00620	ko00000,ko00001,ko01000	L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
DCGOIPII_00661	3.14e-29	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
DCGOIPII_00662	1.36e-10	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
DCGOIPII_00663	1.96e-138	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
DCGOIPII_00664	1.6e-69	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
DCGOIPII_00665	1.49e-167	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
DCGOIPII_00666	5.49e-155	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
DCGOIPII_00667	3.86e-109	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
DCGOIPII_00668	0.0	pulA	3.2.1.41	CBM48,GH13	G	ko:K01200	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko01000	belongs to the glycosyl hydrolase 13 family
DCGOIPII_00669	4.14e-113	-	-	-	K	ko:K03484	-	ko00000,ko03000	Periplasmic binding protein domain
DCGOIPII_00670	5.32e-42	-	-	-	-	ko:K18829	-	ko00000,ko02048	-
DCGOIPII_00671	4.02e-91	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	Toxin-antitoxin system, toxin component, MazF family
DCGOIPII_00672	7.71e-133	-	-	-	L	-	-	-	Integrase
DCGOIPII_00673	2.28e-194	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
DCGOIPII_00674	3.87e-73	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
DCGOIPII_00675	5.2e-137	-	-	-	L	-	-	-	PFAM Integrase catalytic
DCGOIPII_00676	2.28e-76	eriC	-	-	P	ko:K03281	-	ko00000	chloride
DCGOIPII_00677	1.59e-66	eriC	-	-	P	ko:K03281	-	ko00000	chloride
DCGOIPII_00678	6.55e-76	eriC	-	-	P	ko:K03281	-	ko00000	chloride
DCGOIPII_00679	1.45e-34	-	-	-	K	-	-	-	FCD
DCGOIPII_00680	3.87e-20	-	-	-	K	-	-	-	FCD
DCGOIPII_00681	4.37e-132	-	-	-	GM	-	-	-	NmrA-like family
DCGOIPII_00682	5.5e-154	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
DCGOIPII_00683	1.56e-164	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
DCGOIPII_00684	3.74e-213	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
DCGOIPII_00685	7.13e-123	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
DCGOIPII_00686	6.37e-231	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
DCGOIPII_00687	2.9e-313	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
DCGOIPII_00688	8.52e-269	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
DCGOIPII_00689	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
DCGOIPII_00690	1.24e-304	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
DCGOIPII_00691	1.17e-190	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
DCGOIPII_00692	7.2e-61	-	-	-	-	-	-	-	-
DCGOIPII_00693	2.88e-105	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
DCGOIPII_00694	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
DCGOIPII_00695	1.02e-29	-	-	-	S	-	-	-	Alpha beta hydrolase
DCGOIPII_00696	4.05e-79	-	-	-	S	-	-	-	Alpha beta hydrolase
DCGOIPII_00697	9.49e-33	-	-	-	-	-	-	-	-
DCGOIPII_00698	4.3e-66	-	-	-	-	-	-	-	-
DCGOIPII_00699	7.71e-188	supH	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
DCGOIPII_00700	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
DCGOIPII_00701	9.02e-31	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
DCGOIPII_00702	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
DCGOIPII_00703	1.82e-86	yusI	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	Belongs to the ArsC family
DCGOIPII_00704	1.75e-227	lipA	-	-	I	-	-	-	Carboxylesterase family
DCGOIPII_00706	4.54e-234	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
DCGOIPII_00707	2.56e-203	cinI	-	-	S	ko:K06889	-	ko00000	Serine hydrolase (FSH1)
DCGOIPII_00708	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2207)
DCGOIPII_00709	2.07e-38	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
DCGOIPII_00712	0.0	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
DCGOIPII_00713	1.5e-193	-	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DCGOIPII_00714	6.82e-66	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
DCGOIPII_00715	3.94e-64	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
DCGOIPII_00716	3.54e-256	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
DCGOIPII_00717	1.22e-132	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DCGOIPII_00718	7.98e-93	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
DCGOIPII_00719	3.38e-86	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DCGOIPII_00720	5.11e-183	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
DCGOIPII_00721	1.26e-237	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
DCGOIPII_00722	4.4e-47	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
DCGOIPII_00723	7.4e-195	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
DCGOIPII_00724	1.83e-190	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
DCGOIPII_00725	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
DCGOIPII_00726	2.19e-100	-	-	-	S	-	-	-	ASCH
DCGOIPII_00727	5.97e-145	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
DCGOIPII_00728	2.37e-46	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
DCGOIPII_00729	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DCGOIPII_00730	4.41e-220	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DCGOIPII_00731	1.84e-309	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DCGOIPII_00732	1.14e-179	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
DCGOIPII_00733	2.35e-281	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
DCGOIPII_00734	1.82e-139	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
DCGOIPII_00735	2.17e-211	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
DCGOIPII_00736	2.61e-154	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
DCGOIPII_00737	3.84e-160	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
DCGOIPII_00738	7.99e-42	-	-	-	-	-	-	-	-
DCGOIPII_00739	1.33e-35	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
DCGOIPII_00740	8.29e-75	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
DCGOIPII_00741	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
DCGOIPII_00742	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DCGOIPII_00743	9.07e-234	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
DCGOIPII_00744	1.48e-45	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DCGOIPII_00745	4.94e-245	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
DCGOIPII_00746	3.27e-229	oppF	-	-	P	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
DCGOIPII_00747	1.6e-220	oppB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
DCGOIPII_00748	8.77e-181	oppC5	-	-	P	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
DCGOIPII_00749	2.35e-54	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
DCGOIPII_00750	5.51e-299	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
DCGOIPII_00751	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
DCGOIPII_00752	2.8e-160	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
DCGOIPII_00753	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
DCGOIPII_00754	7.04e-237	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
DCGOIPII_00755	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
DCGOIPII_00756	1.36e-62	-	-	-	-	-	-	-	-
DCGOIPII_00757	1.89e-172	cysA	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
DCGOIPII_00758	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
DCGOIPII_00759	0.0	ctrA	-	-	E	ko:K03294	-	ko00000	amino acid
DCGOIPII_00760	2.75e-72	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
DCGOIPII_00761	8.09e-291	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DCGOIPII_00762	6.78e-60	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
DCGOIPII_00763	2.95e-122	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
DCGOIPII_00764	2.81e-174	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
DCGOIPII_00765	1.64e-74	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
DCGOIPII_00766	1e-269	-	-	-	S	-	-	-	SLAP domain
DCGOIPII_00767	1.4e-155	ung2	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil-DNA glycosylase
DCGOIPII_00768	1.02e-186	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
DCGOIPII_00769	9.86e-146	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DCGOIPII_00770	4.16e-51	ynzC	-	-	S	-	-	-	UPF0291 protein
DCGOIPII_00771	1.3e-40	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
DCGOIPII_00772	0.0	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
DCGOIPII_00773	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
DCGOIPII_00774	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
DCGOIPII_00775	8.18e-109	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
DCGOIPII_00776	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
DCGOIPII_00777	1.88e-172	-	-	-	S	-	-	-	SLAP domain
DCGOIPII_00778	1.16e-129	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
DCGOIPII_00779	1.06e-22	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
DCGOIPII_00780	6.67e-31	-	-	-	-	-	-	-	-
DCGOIPII_00781	4.52e-81	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
DCGOIPII_00782	3.17e-242	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
DCGOIPII_00783	2.61e-47	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
DCGOIPII_00784	7.41e-276	-	-	-	EGP	ko:K08196	-	ko00000,ko02000	Major Facilitator
DCGOIPII_00785	0.0	-	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
DCGOIPII_00786	1.32e-173	-	-	-	-	-	-	-	-
DCGOIPII_00787	3.81e-73	-	-	-	S	-	-	-	Antibiotic biosynthesis monooxygenase
DCGOIPII_00788	7.29e-24	yiaC	-	-	K	ko:K03826	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
DCGOIPII_00789	3.11e-39	-	-	-	L	-	-	-	Transposase
DCGOIPII_00790	5.44e-252	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
DCGOIPII_00791	2.08e-145	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
DCGOIPII_00792	4.93e-243	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
DCGOIPII_00793	2.21e-180	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
DCGOIPII_00794	4.33e-236	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
DCGOIPII_00795	5.86e-168	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
DCGOIPII_00796	4.96e-121	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
DCGOIPII_00797	6.38e-178	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
DCGOIPII_00798	2.37e-182	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
DCGOIPII_00799	6.38e-254	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
DCGOIPII_00800	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
DCGOIPII_00801	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DCGOIPII_00802	3.4e-108	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
DCGOIPII_00803	1.02e-260	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
DCGOIPII_00804	3.75e-63	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
DCGOIPII_00805	1.61e-64	ylxQ	-	-	J	-	-	-	ribosomal protein
DCGOIPII_00806	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
DCGOIPII_00807	1.67e-79	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
DCGOIPII_00808	1.64e-198	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
DCGOIPII_00809	2.65e-223	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
DCGOIPII_00810	2.56e-248	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
DCGOIPII_00811	1.07e-108	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
DCGOIPII_00812	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
DCGOIPII_00813	2.8e-276	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
DCGOIPII_00814	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
DCGOIPII_00815	2.21e-130	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
DCGOIPII_00816	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
DCGOIPII_00817	1.15e-121	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DCGOIPII_00818	1.84e-252	-	1.8.1.7	-	C	ko:K00383,ko:K21739	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulfide oxidoreductase
DCGOIPII_00819	9.23e-270	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
DCGOIPII_00820	2.66e-52	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
DCGOIPII_00821	2.1e-65	-	-	-	S	-	-	-	Metal binding domain of Ada
DCGOIPII_00822	0.0	-	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
DCGOIPII_00823	8.69e-177	lysR5	-	-	K	-	-	-	LysR substrate binding domain
DCGOIPII_00824	1.29e-301	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
DCGOIPII_00825	5.39e-84	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DCGOIPII_00826	9.23e-77	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DCGOIPII_00827	1.48e-119	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
DCGOIPII_00828	5.46e-126	citX	2.7.7.61	-	HI	ko:K05964	ko02020,map02020	ko00000,ko00001,ko01000	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
DCGOIPII_00829	1.07e-287	-	-	-	S	-	-	-	Sterol carrier protein domain
DCGOIPII_00830	4.04e-29	-	-	-	-	-	-	-	-
DCGOIPII_00831	1.03e-141	-	-	-	K	-	-	-	LysR substrate binding domain
DCGOIPII_00832	1.13e-126	-	-	-	-	-	-	-	-
DCGOIPII_00833	8.37e-153	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
DCGOIPII_00834	9.22e-159	-	-	-	-	-	-	-	-
DCGOIPII_00835	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
DCGOIPII_00836	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
DCGOIPII_00837	2.62e-92	-	-	-	-	-	-	-	-
DCGOIPII_00838	8.71e-31	-	-	-	G	-	-	-	Ribose/Galactose Isomerase
DCGOIPII_00839	1.32e-92	-	-	-	K	-	-	-	sequence-specific DNA binding
DCGOIPII_00840	0.0	-	-	-	L	-	-	-	PLD-like domain
DCGOIPII_00841	1.18e-133	yrgI	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Histidine phosphatase superfamily (branch 1)
DCGOIPII_00842	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
DCGOIPII_00843	8.2e-43	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase
DCGOIPII_00844	1.46e-260	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase
DCGOIPII_00845	2.95e-283	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
DCGOIPII_00846	4.53e-204	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
DCGOIPII_00847	6.13e-148	-	-	-	-	-	-	-	-
DCGOIPII_00848	2.32e-173	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DCGOIPII_00851	7.39e-227	-	-	-	L	ko:K07012	-	ko00000,ko01000,ko02048	CRISPR-associated helicase cas3
DCGOIPII_00852	1.22e-136	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DCGOIPII_00853	2.43e-150	-	-	-	S	-	-	-	Peptidase family M23
DCGOIPII_00854	5.41e-134	-	-	-	-	-	-	-	-
DCGOIPII_00855	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	E1-E2 ATPase
DCGOIPII_00856	5.51e-46	-	-	-	C	-	-	-	Heavy-metal-associated domain
DCGOIPII_00857	9.36e-124	dpsB	-	-	P	-	-	-	Belongs to the Dps family
DCGOIPII_00858	6.41e-148	fnr	-	-	K	ko:K21562	-	ko00000,ko03000	Transcriptional regulator, Crp Fnr family
DCGOIPII_00860	3.76e-107	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
DCGOIPII_00861	8.1e-198	yqfL	2.7.11.33, 2.7.4.28	-	F	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
DCGOIPII_00862	4.83e-30	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
DCGOIPII_00863	8.85e-92	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
DCGOIPII_00864	1.74e-224	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
DCGOIPII_00865	3.58e-129	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
DCGOIPII_00866	4.58e-215	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
DCGOIPII_00867	7.41e-176	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
DCGOIPII_00868	7.42e-228	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
DCGOIPII_00869	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
DCGOIPII_00870	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
DCGOIPII_00871	9e-255	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
DCGOIPII_00872	1.77e-165	-	-	-	S	-	-	-	Peptidase family M23
DCGOIPII_00873	5.37e-106	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
DCGOIPII_00874	2.3e-158	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
DCGOIPII_00875	6.95e-197	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DCGOIPII_00876	3.47e-308	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
DCGOIPII_00877	8.83e-81	lexA	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator, GntR family
DCGOIPII_00878	1.81e-159	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
DCGOIPII_00879	8.31e-158	-	-	-	-	-	-	-	-
DCGOIPII_00880	4.91e-132	-	-	-	-	-	-	-	-
DCGOIPII_00881	8.22e-152	-	-	-	-	-	-	-	-
DCGOIPII_00882	1.98e-52	ybjQ	-	-	S	-	-	-	Belongs to the UPF0145 family
DCGOIPII_00883	4.24e-37	-	-	-	-	-	-	-	-
DCGOIPII_00884	3e-132	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
DCGOIPII_00885	8.08e-184	-	-	-	-	-	-	-	-
DCGOIPII_00886	7.6e-216	-	-	-	-	-	-	-	-
DCGOIPII_00887	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
DCGOIPII_00888	3.15e-151	-	3.1.3.102, 3.1.3.104, 3.1.3.23	-	G	ko:K07757,ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sucrose-6F-phosphate phosphohydrolase
DCGOIPII_00889	4.17e-237	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
DCGOIPII_00890	6.67e-261	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
DCGOIPII_00891	5.87e-228	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
DCGOIPII_00892	7.42e-174	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	GHMP kinases N terminal domain
DCGOIPII_00893	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
DCGOIPII_00894	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
DCGOIPII_00895	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
DCGOIPII_00896	1.66e-116	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
DCGOIPII_00897	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
DCGOIPII_00898	3.29e-147	dnaD	-	-	L	ko:K02086	-	ko00000	DnaD domain protein
DCGOIPII_00899	1.58e-147	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DCGOIPII_00900	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
DCGOIPII_00901	8.47e-152	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
DCGOIPII_00902	1.18e-139	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
DCGOIPII_00903	1.52e-89	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
DCGOIPII_00904	2.91e-278	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
DCGOIPII_00905	2.74e-308	cpdA	-	-	S	-	-	-	Calcineurin-like phosphoesterase
DCGOIPII_00906	3.24e-102	-	-	-	-	-	-	-	-
DCGOIPII_00907	9.91e-150	-	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Ham1 family
DCGOIPII_00908	1.02e-46	-	-	-	-	-	-	-	-
DCGOIPII_00909	4.13e-83	-	-	-	-	-	-	-	-
DCGOIPII_00912	7.5e-160	-	-	-	-	-	-	-	-
DCGOIPII_00913	9.76e-136	pncA	-	-	Q	-	-	-	Isochorismatase family
DCGOIPII_00914	5.84e-49	-	-	-	-	-	-	-	-
DCGOIPII_00915	1.21e-20	snf	-	-	KL	-	-	-	domain protein
DCGOIPII_00916	0.0	snf	-	-	KL	-	-	-	domain protein
DCGOIPII_00917	6.03e-169	snf	-	-	KL	-	-	-	domain protein
DCGOIPII_00918	7.72e-140	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
DCGOIPII_00919	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
DCGOIPII_00920	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
DCGOIPII_00921	4.5e-234	-	-	-	K	-	-	-	Transcriptional regulator
DCGOIPII_00922	8.96e-223	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
DCGOIPII_00923	2.45e-146	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DCGOIPII_00924	5.03e-76	-	-	-	K	-	-	-	Helix-turn-helix domain
DCGOIPII_00925	7.69e-159	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
DCGOIPII_00927	7.55e-53	-	-	-	S	-	-	-	Transglycosylase associated protein
DCGOIPII_00928	1.17e-269	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
DCGOIPII_00929	4.36e-142	XK27_00160	-	-	S	-	-	-	Domain of unknown function (DUF5052)
DCGOIPII_00930	3.03e-90	-	-	-	-	-	-	-	-
DCGOIPII_00931	6.14e-259	xerS	-	-	L	ko:K03733	-	ko00000,ko03036	Belongs to the 'phage' integrase family
DCGOIPII_00932	0.0	mutS1	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
DCGOIPII_00933	6.08e-203	-	-	-	S	-	-	-	EDD domain protein, DegV family
DCGOIPII_00934	2.06e-88	-	-	-	-	-	-	-	-
DCGOIPII_00935	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
DCGOIPII_00936	0.0	carB1	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
DCGOIPII_00937	1.44e-255	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
DCGOIPII_00938	3.24e-221	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
DCGOIPII_00939	1.1e-102	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
DCGOIPII_00940	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
DCGOIPII_00941	1.21e-114	psd	4.1.1.65	-	I	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the phosphatidylserine decarboxylase family
DCGOIPII_00942	1.08e-06	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
DCGOIPII_00943	7.72e-101	-	-	-	S	ko:K07126	-	ko00000	Sel1-like repeats.
DCGOIPII_00944	5.77e-127	-	-	-	S	-	-	-	AAA domain
DCGOIPII_00945	9.67e-229	-	-	-	-	-	-	-	-
DCGOIPII_00946	4.94e-44	-	-	-	-	-	-	-	-
DCGOIPII_00947	8.2e-102	-	-	-	S	-	-	-	HIRAN
DCGOIPII_00948	2.45e-94	-	-	-	S	ko:K07126	-	ko00000	Sel1-like repeats.
DCGOIPII_00949	4.46e-111	-	-	-	-	-	-	-	-
DCGOIPII_00950	4.37e-31	-	-	-	S	-	-	-	Domain of unknown function (DUF3841)
DCGOIPII_00951	0.0	-	-	-	S	-	-	-	Protein of unknown function DUF262
DCGOIPII_00952	1.35e-61	-	-	-	-	-	-	-	-
DCGOIPII_00957	1.05e-88	-	-	-	-	-	-	-	-
DCGOIPII_00959	2.11e-167	mrr2	-	-	L	ko:K07448	-	ko00000,ko02048	restriction endonuclease
DCGOIPII_00960	9.25e-154	-	-	-	L	ko:K07448	-	ko00000,ko02048	restriction endonuclease
DCGOIPII_00961	0.0	-	3.1.21.3	-	V	ko:K01153	-	ko00000,ko01000,ko02048	EcoEI R protein C-terminal
DCGOIPII_00962	2.11e-107	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
DCGOIPII_00963	0.0	-	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
DCGOIPII_00965	0.0	-	-	-	S	-	-	-	SLAP domain
DCGOIPII_00967	1.03e-302	XK27_01810	-	-	S	-	-	-	Calcineurin-like phosphoesterase
DCGOIPII_00968	1.95e-78	-	-	-	S	ko:K07006	-	ko00000	Pyridoxamine 5'-phosphate oxidase
DCGOIPII_00969	3.88e-44	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
DCGOIPII_00970	2.85e-219	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
DCGOIPII_00972	0.0	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
DCGOIPII_00973	1.71e-128	treR	-	-	K	ko:K03486	-	ko00000,ko03000	UTRA
DCGOIPII_00974	0.0	treB	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
DCGOIPII_00975	4.58e-85	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
DCGOIPII_00976	2.78e-242	-	-	-	L	ko:K07478	-	ko00000	AAA C-terminal domain
DCGOIPII_00977	0.0	yqjE	3.4.11.14, 3.4.11.4	-	E	ko:K01258,ko:K01263	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
DCGOIPII_00978	2.34e-107	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
DCGOIPII_00979	1.13e-291	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
DCGOIPII_00980	2.96e-121	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
DCGOIPII_00981	9.3e-129	pdxK	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
DCGOIPII_00982	2.63e-258	pbpX1	-	-	V	-	-	-	Beta-lactamase
DCGOIPII_00983	2.22e-145	maa3	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
DCGOIPII_00984	3.21e-104	yvbK	-	-	K	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
DCGOIPII_00985	1.4e-146	-	-	-	I	-	-	-	Acid phosphatase homologues
DCGOIPII_00986	2.25e-241	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
DCGOIPII_00987	0.0	uvrA2	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC, A subunit
DCGOIPII_00988	8.83e-107	-	-	-	C	-	-	-	Flavodoxin
DCGOIPII_00989	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
DCGOIPII_00990	7.37e-313	ynbB	-	-	P	-	-	-	aluminum resistance
DCGOIPII_00991	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
DCGOIPII_00992	0.0	-	-	-	E	-	-	-	Amino acid permease
DCGOIPII_00993	9.58e-122	-	-	-	C	-	-	-	Pyridoxamine 5'-phosphate oxidase
DCGOIPII_00994	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
DCGOIPII_00995	1.19e-103	ybgF	-	-	E	ko:K02205,ko:K03293,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
DCGOIPII_00996	4.91e-17	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
DCGOIPII_00997	1.25e-85	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DCGOIPII_00998	1.32e-88	crcB1	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DCGOIPII_00999	1.57e-196	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
DCGOIPII_01000	1.26e-120	-	-	-	M	-	-	-	LysM domain protein
DCGOIPII_01001	1.89e-96	-	-	-	C	-	-	-	Aldo keto reductase
DCGOIPII_01002	9.4e-232	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
DCGOIPII_01003	8.06e-313	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
DCGOIPII_01004	4.67e-116	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
DCGOIPII_01005	7.31e-181	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Phage integrase, N-terminal SAM-like domain
DCGOIPII_01006	1.42e-315	trmFO	2.1.1.74	-	J	ko:K04094	-	ko00000,ko01000,ko03016,ko03036	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
DCGOIPII_01007	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DCGOIPII_01008	1.23e-194	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
DCGOIPII_01009	1.73e-169	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DCGOIPII_01010	3.71e-199	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
DCGOIPII_01011	6.86e-206	nhaP4	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
DCGOIPII_01012	4.46e-89	-	-	-	P	-	-	-	NhaP-type Na H and K H
DCGOIPII_01013	9.85e-49	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
DCGOIPII_01014	8.63e-191	degV3	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
DCGOIPII_01015	1.8e-143	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
DCGOIPII_01016	6.98e-285	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
DCGOIPII_01017	4.7e-205	XK27_10395	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DCGOIPII_01018	2.75e-111	-	3.4.21.96	-	S	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	SLAP domain
DCGOIPII_01019	1.11e-41	yagE	-	-	E	-	-	-	Amino acid permease
DCGOIPII_01020	6.41e-125	yagE	-	-	E	-	-	-	Amino acid permease
DCGOIPII_01021	2.81e-189	-	2.3.1.81	-	V	ko:K00662	-	ko00000,ko01000,ko01504	Aminoglycoside 3-N-acetyltransferase
DCGOIPII_01022	4.87e-187	-	-	-	F	-	-	-	Phosphorylase superfamily
DCGOIPII_01023	6.97e-53	-	-	-	F	-	-	-	NUDIX domain
DCGOIPII_01024	5.25e-105	-	-	-	S	-	-	-	AAA domain
DCGOIPII_01025	6.68e-128	-	-	-	S	-	-	-	F420-0:Gamma-glutamyl ligase
DCGOIPII_01026	1.41e-73	codA	-	-	F	-	-	-	Cytidine and deoxycytidylate deaminase zinc-binding region
DCGOIPII_01027	5.35e-95	yxaM	-	-	EGP	-	-	-	Major facilitator Superfamily
DCGOIPII_01028	1.81e-67	yxaM	-	-	EGP	-	-	-	Major facilitator Superfamily
DCGOIPII_01029	3.59e-108	-	-	-	S	-	-	-	Alpha/beta hydrolase family
DCGOIPII_01030	3.4e-106	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
DCGOIPII_01031	6.22e-101	-	2.3.1.57	-	K	ko:K00657	ko00330,ko01100,ko04216,map00330,map01100,map04216	ko00000,ko00001,ko00002,ko01000	Acetyltransferase (GNAT) family
DCGOIPII_01032	2.79e-90	rimL	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
DCGOIPII_01033	3.16e-154	glsA	3.5.1.2	-	E	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	ko00000,ko00001,ko01000	Belongs to the glutaminase family
DCGOIPII_01034	1.21e-140	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
DCGOIPII_01035	9.22e-33	-	-	-	S	-	-	-	Protein of unknown function (DUF3923)
DCGOIPII_01036	8.55e-77	-	-	-	-	-	-	-	-
DCGOIPII_01037	2.15e-63	-	-	-	S	-	-	-	MazG-like family
DCGOIPII_01038	2.04e-166	-	-	-	S	-	-	-	Protein of unknown function (DUF2785)
DCGOIPII_01039	4.08e-43	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
DCGOIPII_01040	9.44e-117	yokL3	-	-	J	-	-	-	Acetyltransferase (GNAT) domain
DCGOIPII_01041	3.99e-46	-	-	-	-	-	-	-	-
DCGOIPII_01042	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
DCGOIPII_01043	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DCGOIPII_01044	7.11e-293	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
DCGOIPII_01045	8.21e-57	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
DCGOIPII_01046	1.34e-314	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
DCGOIPII_01047	1.4e-281	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
DCGOIPII_01048	1.96e-148	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
DCGOIPII_01049	1.13e-41	-	-	-	M	-	-	-	Lysin motif
DCGOIPII_01050	8.49e-146	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
DCGOIPII_01051	4.65e-168	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
DCGOIPII_01052	7.57e-135	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
DCGOIPII_01053	1.81e-169	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
DCGOIPII_01054	7.97e-82	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
DCGOIPII_01055	1.65e-213	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
DCGOIPII_01056	4.41e-216	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
DCGOIPII_01057	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
DCGOIPII_01058	5.46e-233	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
DCGOIPII_01059	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
DCGOIPII_01060	1.25e-38	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
DCGOIPII_01061	0.0	yfkN	3.1.3.6, 3.1.4.16	-	F	ko:K01119	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
DCGOIPII_01062	5.14e-38	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
DCGOIPII_01063	6.24e-38	-	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
DCGOIPII_01064	8.69e-186	-	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
DCGOIPII_01065	1.75e-225	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
DCGOIPII_01066	0.0	oatA	-	-	I	-	-	-	Acyltransferase
DCGOIPII_01067	1.88e-309	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
DCGOIPII_01068	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
DCGOIPII_01069	1.58e-140	yngC	-	-	S	-	-	-	SNARE associated Golgi protein
DCGOIPII_01070	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
DCGOIPII_01071	6.61e-230	gyaR	1.1.1.26, 1.1.1.399, 1.1.1.95	-	CH	ko:K00015,ko:K00058	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DCGOIPII_01072	3.84e-192	yxeH	-	-	S	-	-	-	hydrolase
DCGOIPII_01073	2.94e-200	-	-	-	S	-	-	-	reductase
DCGOIPII_01074	3.82e-276	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DCGOIPII_01076	1.3e-282	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
DCGOIPII_01077	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
DCGOIPII_01078	4.28e-312	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
DCGOIPII_01079	1.8e-99	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
DCGOIPII_01080	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DCGOIPII_01081	5.4e-80	-	-	-	-	-	-	-	-
DCGOIPII_01082	2.78e-223	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
DCGOIPII_01083	1.3e-115	ybaK	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DCGOIPII_01084	0.0	-	-	-	S	-	-	-	Putative threonine/serine exporter
DCGOIPII_01085	1.05e-226	citR	-	-	K	-	-	-	Putative sugar-binding domain
DCGOIPII_01086	2.93e-67	-	-	-	-	-	-	-	-
DCGOIPII_01087	1.35e-85	-	-	-	S	-	-	-	Domain of unknown function DUF1828
DCGOIPII_01088	5.38e-125	-	-	-	S	ko:K16924	-	ko00000,ko00002,ko02000	UPF0397 protein
DCGOIPII_01089	2.3e-39	ykoD	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
DCGOIPII_01090	0.0	ykoD	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
DCGOIPII_01091	2.58e-189	cbiQ	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt transport
DCGOIPII_01092	1.46e-31	-	-	-	-	-	-	-	-
DCGOIPII_01093	1.24e-93	ytwI	-	-	S	-	-	-	Protein of unknown function (DUF441)
DCGOIPII_01094	0.0	citF	2.8.3.10	-	H	ko:K01643	ko02020,map02020	ko00000,ko00001,ko01000	Citrate (pro-3S)-lyase alpha chain
DCGOIPII_01095	4.4e-215	citE	4.1.3.34	-	G	ko:K01644	ko02020,map02020	ko00000,ko00001,ko01000	Belongs to the HpcH HpaI aldolase family
DCGOIPII_01096	1.6e-59	citD	-	-	C	ko:K01646	ko02020,map02020	ko00000,ko00001	Covalent carrier of the coenzyme of citrate lyase
DCGOIPII_01097	1.55e-250	citC	6.2.1.22	-	H	ko:K01910	ko02020,map02020	ko00000,ko00001,ko01000	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
DCGOIPII_01098	1.2e-196	-	-	-	I	-	-	-	Alpha/beta hydrolase family
DCGOIPII_01099	0.0	citP	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
DCGOIPII_01100	3.05e-170	-	-	-	H	-	-	-	Aldolase/RraA
DCGOIPII_01101	0.0	pepC4	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
DCGOIPII_01102	1.66e-217	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
DCGOIPII_01103	0.0	frdA	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
DCGOIPII_01104	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
DCGOIPII_01105	2.34e-122	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
DCGOIPII_01106	5.74e-243	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DCGOIPII_01107	1.78e-204	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
DCGOIPII_01108	6.31e-224	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
DCGOIPII_01109	0.0	aha1	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
DCGOIPII_01110	4.06e-123	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DCGOIPII_01111	1.22e-229	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
DCGOIPII_01112	0.0	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
DCGOIPII_01113	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
DCGOIPII_01114	0.0	-	-	-	P	ko:K06148	-	ko00000,ko02000	ABC transporter
DCGOIPII_01115	1.22e-48	-	-	-	-	-	-	-	-
DCGOIPII_01117	1.46e-161	-	-	-	S	-	-	-	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
DCGOIPII_01118	3.24e-113	-	-	-	K	-	-	-	GNAT family
DCGOIPII_01119	1.5e-257	XK27_00915	-	-	C	-	-	-	Luciferase-like monooxygenase
DCGOIPII_01120	9.66e-215	-	-	-	EGP	-	-	-	Major Facilitator
DCGOIPII_01121	1.66e-44	-	-	-	K	-	-	-	Transcriptional regulator
DCGOIPII_01125	6.03e-114	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
DCGOIPII_01126	0.0	-	-	-	L	-	-	-	Plasmid pRiA4b ORF-3-like protein
DCGOIPII_01127	1.82e-310	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
DCGOIPII_01128	1.25e-152	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
DCGOIPII_01129	8.76e-142	ltrA	-	-	S	-	-	-	Bacterial low temperature requirement A protein (LtrA)
DCGOIPII_01130	8.15e-143	ybbB	-	-	S	-	-	-	Protein of unknown function (DUF1211)
DCGOIPII_01131	0.0	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
DCGOIPII_01132	1.17e-136	-	-	-	S	-	-	-	Alpha beta hydrolase
DCGOIPII_01133	5.7e-113	-	-	-	K	-	-	-	Transcriptional regulator
DCGOIPII_01134	7.35e-99	-	-	-	K	-	-	-	LytTr DNA-binding domain
DCGOIPII_01135	1.77e-84	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
DCGOIPII_01136	3.64e-178	dhrS4	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Oxidoreductase, short chain dehydrogenase reductase family protein
DCGOIPII_01137	2.62e-256	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DCGOIPII_01138	1.07e-135	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin synthase
DCGOIPII_01139	2.65e-290	ribBA	3.5.4.25, 4.1.99.12	-	H	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
DCGOIPII_01140	1.15e-104	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
DCGOIPII_01141	1.04e-39	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
DCGOIPII_01142	9.43e-108	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
DCGOIPII_01143	7.52e-15	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
DCGOIPII_01144	7.6e-120	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
DCGOIPII_01145	1.1e-257	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
DCGOIPII_01146	3.92e-177	-	-	-	M	-	-	-	Glycosyl transferase
DCGOIPII_01148	3.28e-195	-	-	-	-	-	-	-	-
DCGOIPII_01149	2.75e-82	-	-	-	M	-	-	-	Peptidase family M1 domain
DCGOIPII_01151	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
DCGOIPII_01152	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
DCGOIPII_01153	0.0	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
DCGOIPII_01154	2.13e-129	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
DCGOIPII_01155	3.72e-117	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
DCGOIPII_01156	2.33e-130	-	-	-	S	ko:K07025	-	ko00000	Haloacid dehalogenase-like hydrolase
DCGOIPII_01157	0.000263	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein
DCGOIPII_01158	4.66e-07	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FMN_bind
DCGOIPII_01159	2.41e-111	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
DCGOIPII_01160	6.04e-228	-	-	-	S	-	-	-	Conserved hypothetical protein 698
DCGOIPII_01162	2.09e-244	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
DCGOIPII_01163	8.23e-132	-	-	-	I	-	-	-	PAP2 superfamily
DCGOIPII_01164	1.28e-189	-	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
DCGOIPII_01165	3.52e-311	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
DCGOIPII_01166	2.7e-126	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
DCGOIPII_01167	1.13e-108	yfhC	-	-	C	-	-	-	nitroreductase
DCGOIPII_01168	4.27e-175	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
DCGOIPII_01169	0.0	pbg6	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
DCGOIPII_01170	1.8e-284	pts23C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DCGOIPII_01171	4.04e-154	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA
DCGOIPII_01172	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
DCGOIPII_01173	4.04e-94	-	-	-	S	-	-	-	Domain of unknown function (DUF3284)
DCGOIPII_01174	7.88e-79	celC	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose Cellobiose specific IIA subunit
DCGOIPII_01175	1.32e-74	pts20B	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
DCGOIPII_01176	3.28e-166	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA domain
DCGOIPII_01177	0.0	pbg4	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
DCGOIPII_01178	8.68e-118	alkD	-	-	L	-	-	-	DNA alkylation repair enzyme
DCGOIPII_01179	3.14e-226	iunH	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	inosine-uridine preferring nucleoside hydrolase
DCGOIPII_01180	3.85e-109	-	-	-	-	-	-	-	-
DCGOIPII_01181	1.51e-53	-	-	-	C	-	-	-	FMN_bind
DCGOIPII_01182	0.0	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
DCGOIPII_01183	1.03e-249	pbpX1	-	-	V	-	-	-	Beta-lactamase
DCGOIPII_01184	2.58e-254	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DCGOIPII_01185	1.82e-276	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
DCGOIPII_01186	1.97e-184	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
DCGOIPII_01187	3.66e-225	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DCGOIPII_01188	4.48e-278	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
DCGOIPII_01189	1.22e-104	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
DCGOIPII_01190	4.84e-313	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
DCGOIPII_01191	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
DCGOIPII_01192	2.55e-245	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
DCGOIPII_01193	3.73e-129	potE	-	-	E	-	-	-	Amino acid permease
DCGOIPII_01194	1.9e-28	potE	-	-	E	-	-	-	Amino Acid
DCGOIPII_01195	3.9e-137	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
DCGOIPII_01196	1.84e-298	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
DCGOIPII_01197	3.12e-292	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
DCGOIPII_01198	4.06e-287	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
DCGOIPII_01199	3.14e-190	-	-	-	-	-	-	-	-
DCGOIPII_01200	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DCGOIPII_01201	7.11e-57	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
DCGOIPII_01202	6.28e-47	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
DCGOIPII_01203	3e-225	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
DCGOIPII_01204	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
DCGOIPII_01205	3.5e-122	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
DCGOIPII_01206	5.15e-247	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
DCGOIPII_01207	7.07e-107	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
DCGOIPII_01208	3.01e-125	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
DCGOIPII_01209	5.76e-70	ylbG	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2129)
DCGOIPII_01210	9.6e-269	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
DCGOIPII_01211	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
DCGOIPII_01212	9.73e-132	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
DCGOIPII_01213	5.22e-45	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
DCGOIPII_01214	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DCGOIPII_01215	3.07e-235	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
DCGOIPII_01216	0.0	-	-	-	L	-	-	-	Nuclease-related domain
DCGOIPII_01217	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
DCGOIPII_01218	2.31e-148	-	-	-	S	-	-	-	repeat protein
DCGOIPII_01219	3.87e-162	pgm	-	-	G	-	-	-	Phosphoglycerate mutase family
DCGOIPII_01220	1.9e-279	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
DCGOIPII_01221	2.97e-76	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
DCGOIPII_01222	2.3e-276	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
DCGOIPII_01223	2.05e-163	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DCGOIPII_01224	6.03e-56	-	-	-	-	-	-	-	-
DCGOIPII_01225	1.27e-134	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
DCGOIPII_01226	2.32e-43	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
DCGOIPII_01227	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
DCGOIPII_01228	6.3e-138	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
DCGOIPII_01229	1.4e-192	ylmH	-	-	S	-	-	-	S4 domain protein
DCGOIPII_01230	2.42e-60	yggT	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
DCGOIPII_01231	1.43e-96	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
DCGOIPII_01232	2.26e-303	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DCGOIPII_01233	3.67e-316	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
DCGOIPII_01234	1.33e-195	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
DCGOIPII_01235	6.71e-265	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DCGOIPII_01236	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
DCGOIPII_01237	3.12e-224	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DCGOIPII_01238	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
DCGOIPII_01239	9.31e-72	ftsL	-	-	D	-	-	-	Cell division protein FtsL
DCGOIPII_01240	1.28e-224	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
DCGOIPII_01241	5.63e-102	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
DCGOIPII_01242	1.02e-72	-	-	-	S	-	-	-	Protein of unknown function (DUF3397)
DCGOIPII_01243	1.4e-09	-	-	-	S	-	-	-	Protein of unknown function (DUF4044)
DCGOIPII_01244	5.43e-122	mreD	-	-	-	ko:K03571	-	ko00000,ko03036	-
DCGOIPII_01245	1.17e-188	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
DCGOIPII_01246	8.26e-226	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
DCGOIPII_01247	1.07e-150	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
DCGOIPII_01248	5.26e-163	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
DCGOIPII_01249	7.03e-306	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
DCGOIPII_01250	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
DCGOIPII_01251	1.94e-65	-	-	-	-	-	-	-	-
DCGOIPII_01252	6.45e-168	-	-	-	S	ko:K06926	-	ko00000	AAA domain, putative AbiEii toxin, Type IV TA system
DCGOIPII_01253	0.0	yoaB	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
DCGOIPII_01254	1.76e-16	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
DCGOIPII_01255	2.09e-59	-	-	-	-	-	-	-	-
DCGOIPII_01256	3.89e-122	-	-	-	S	-	-	-	Protein of unknown function (DUF3990)
DCGOIPII_01257	2.02e-218	yfdH	-	GT2	M	ko:K12999	-	ko00000,ko01000,ko01003,ko01005	Glycosyltransferase, group 2 family protein
DCGOIPII_01258	1.06e-86	-	-	-	S	-	-	-	GtrA-like protein
DCGOIPII_01259	6.18e-205	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
DCGOIPII_01260	1.26e-154	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
DCGOIPII_01261	5.71e-230	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
DCGOIPII_01262	1.89e-170	-	-	-	-	-	-	-	-
DCGOIPII_01263	1.05e-172	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
DCGOIPII_01264	1.93e-146	-	-	-	-	-	-	-	-
DCGOIPII_01265	1.53e-05	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DCGOIPII_01268	6.39e-45	-	-	-	-	-	-	-	-
DCGOIPII_01269	9.85e-42	-	-	-	S	-	-	-	Protein of unknown function (DUF4065)
DCGOIPII_01270	7.14e-83	-	-	-	-	-	-	-	-
DCGOIPII_01271	2.83e-103	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
DCGOIPII_01273	4.24e-289	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DCGOIPII_01274	1.74e-272	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
DCGOIPII_01275	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
DCGOIPII_01276	3.07e-142	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
DCGOIPII_01277	1.63e-109	-	-	-	S	-	-	-	Protein of unknown function (DUF1694)
DCGOIPII_01278	2.09e-302	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
DCGOIPII_01279	5.5e-56	-	-	-	-	-	-	-	-
DCGOIPII_01280	5.25e-101	uspA	-	-	T	-	-	-	universal stress protein
DCGOIPII_01281	2e-169	-	-	-	S	-	-	-	zinc-ribbon domain
DCGOIPII_01282	3.02e-237	-	-	-	-	-	-	-	-
DCGOIPII_01283	6.88e-169	-	-	-	S	-	-	-	response to antibiotic
DCGOIPII_01284	3.89e-16	-	-	-	S	-	-	-	response to antibiotic
DCGOIPII_01285	1.78e-51	yebC	-	-	M	-	-	-	Membrane
DCGOIPII_01287	8.59e-180	nagZ	3.2.1.52	-	G	ko:K01207	ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501	ko00000,ko00001,ko00002,ko01000	Glycosyl hydrolase family 3 N terminal domain
DCGOIPII_01288	6.42e-89	-	-	-	-	-	-	-	-
DCGOIPII_01289	2.4e-79	-	-	-	-	-	-	-	-
DCGOIPII_01290	2.05e-276	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
DCGOIPII_01291	1.26e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
DCGOIPII_01292	5.54e-69	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
DCGOIPII_01293	8.31e-228	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
DCGOIPII_01294	1.52e-43	-	-	-	S	-	-	-	Protein of unknown function (DUF1146)
DCGOIPII_01295	2.35e-91	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
DCGOIPII_01296	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
DCGOIPII_01297	5.53e-217	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
DCGOIPII_01298	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
DCGOIPII_01299	9.3e-120	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DCGOIPII_01300	1.69e-86	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
DCGOIPII_01301	4.36e-39	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DCGOIPII_01302	4.44e-161	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
DCGOIPII_01303	5.28e-146	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
DCGOIPII_01304	2.26e-243	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
DCGOIPII_01305	1.24e-198	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
DCGOIPII_01306	6.6e-237	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
DCGOIPII_01307	7.02e-146	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
DCGOIPII_01308	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Domain of unknown function (DUF1727)
DCGOIPII_01311	5.59e-250	ampC	-	-	V	-	-	-	Beta-lactamase
DCGOIPII_01312	3.98e-275	-	-	-	EGP	-	-	-	Major Facilitator
DCGOIPII_01313	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
DCGOIPII_01314	1.52e-136	vanZ	-	-	V	-	-	-	VanZ like family
DCGOIPII_01315	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
DCGOIPII_01316	0.0	yclK	-	-	T	-	-	-	Histidine kinase
DCGOIPII_01317	2.8e-170	-	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
DCGOIPII_01318	9.01e-90	-	-	-	S	-	-	-	SdpI/YhfL protein family
DCGOIPII_01319	1.93e-242	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
DCGOIPII_01320	9.63e-246	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
DCGOIPII_01321	4.57e-24	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
DCGOIPII_01322	9.13e-117	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
DCGOIPII_01323	2.78e-19	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
DCGOIPII_01325	5.28e-282	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DCGOIPII_01326	1.78e-240	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
DCGOIPII_01327	1.5e-29	-	-	-	-	-	-	-	-
DCGOIPII_01328	1.12e-99	-	-	-	U	ko:K02248	-	ko00000,ko00002,ko02044	Putative Competence protein ComGF
DCGOIPII_01329	1.68e-55	-	-	-	-	-	-	-	-
DCGOIPII_01330	3.47e-92	-	-	-	-	ko:K02246	-	ko00000,ko00002,ko02044	-
DCGOIPII_01331	7.88e-63	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	competence protein ComGC
DCGOIPII_01332	5.15e-224	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
DCGOIPII_01333	1.44e-230	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
DCGOIPII_01334	5.65e-171	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
DCGOIPII_01335	3.31e-120	-	-	-	S	-	-	-	VanZ like family
DCGOIPII_01336	4.71e-110	ylbE	-	-	GM	-	-	-	NAD(P)H-binding
DCGOIPII_01337	4.8e-38	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DCGOIPII_01339	5.81e-300	-	-	-	E	-	-	-	Amino acid permease
DCGOIPII_01340	7.52e-145	-	-	-	S	-	-	-	SLAP domain
DCGOIPII_01341	1.9e-22	-	-	-	S	-	-	-	SLAP domain
DCGOIPII_01347	4.47e-20	-	-	-	L	-	-	-	Replication initiation factor
DCGOIPII_01348	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DCGOIPII_01349	5.23e-97	nrdI	-	-	F	ko:K03647	-	ko00000	NrdI Flavodoxin like
DCGOIPII_01350	2.46e-248	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DCGOIPII_01351	1.07e-141	tnpR1	-	-	L	-	-	-	Resolvase, N terminal domain
DCGOIPII_01352	3.29e-90	-	-	-	L	-	-	-	IS1381, transposase OrfA
DCGOIPII_01353	4.87e-96	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
DCGOIPII_01354	1.17e-38	-	-	-	-	-	-	-	-
DCGOIPII_01355	4.65e-184	-	-	-	D	-	-	-	AAA domain
DCGOIPII_01356	5.88e-212	repA	-	-	S	-	-	-	Replication initiator protein A
DCGOIPII_01357	1.14e-164	-	-	-	S	-	-	-	Fic/DOC family
DCGOIPII_01358	2.02e-42	-	-	-	E	-	-	-	Amino acid permease
DCGOIPII_01359	8.31e-226	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
DCGOIPII_01360	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
DCGOIPII_01361	0.0	pts33BCA	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
DCGOIPII_01362	5.06e-196	bglG5	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
DCGOIPII_01363	6.74e-267	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
DCGOIPII_01364	8.81e-112	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DCGOIPII_01365	6.99e-154	-	-	-	-	-	-	-	-
DCGOIPII_01366	1.13e-98	copY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Penicillinase repressor
DCGOIPII_01367	5.66e-190	-	-	-	S	-	-	-	hydrolase
DCGOIPII_01368	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DCGOIPII_01369	7.92e-221	ybbR	-	-	S	-	-	-	YbbR-like protein
DCGOIPII_01370	2.13e-194	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
DCGOIPII_01371	1.64e-264	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
DCGOIPII_01372	1.06e-169	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
DCGOIPII_01373	1.36e-176	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
DCGOIPII_01374	1.25e-263	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
DCGOIPII_01375	3.31e-207	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
DCGOIPII_01376	1.51e-127	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
DCGOIPII_01377	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
DCGOIPII_01378	3.39e-45	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
DCGOIPII_01379	2.36e-33	-	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
DCGOIPII_01380	1.84e-185	-	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
DCGOIPII_01381	1.34e-103	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
DCGOIPII_01382	5.61e-226	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
DCGOIPII_01383	2.61e-171	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
DCGOIPII_01384	5.67e-200	ycsE	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
DCGOIPII_01385	3.07e-124	-	-	-	-	-	-	-	-
DCGOIPII_01386	5.46e-183	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
DCGOIPII_01387	2.86e-286	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
DCGOIPII_01388	2.86e-244	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
DCGOIPII_01389	9.26e-241	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	Putative sugar-binding domain
DCGOIPII_01391	0.0	-	-	-	-	-	-	-	-
DCGOIPII_01392	0.0	ycaM	-	-	E	-	-	-	amino acid
DCGOIPII_01393	3.82e-183	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
DCGOIPII_01394	7.65e-101	-	-	-	K	-	-	-	MerR HTH family regulatory protein
DCGOIPII_01395	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
DCGOIPII_01396	3.22e-122	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
DCGOIPII_01397	1.94e-167	ybbM	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
DCGOIPII_01398	3.16e-144	ybbL	-	-	S	ko:K02068	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
DCGOIPII_01399	0.0	-	-	-	S	-	-	-	SH3-like domain
DCGOIPII_01400	1.16e-128	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
DCGOIPII_01401	8.59e-221	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
DCGOIPII_01402	2.78e-251	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
DCGOIPII_01403	3.19e-207	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
DCGOIPII_01404	9.62e-112	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
DCGOIPII_01405	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
DCGOIPII_01406	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
DCGOIPII_01407	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
DCGOIPII_01408	3.42e-232	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
DCGOIPII_01409	3.31e-239	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
DCGOIPII_01410	9.91e-204	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
DCGOIPII_01411	3.54e-230	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
DCGOIPII_01412	1.68e-26	-	-	-	-	-	-	-	-
DCGOIPII_01413	1.3e-237	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
DCGOIPII_01414	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
DCGOIPII_01415	2.68e-123	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DCGOIPII_01416	8.77e-174	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
DCGOIPII_01417	8.99e-313	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
DCGOIPII_01418	2.92e-153	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
DCGOIPII_01419	2.76e-268	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	transferase
DCGOIPII_01420	3.34e-290	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
DCGOIPII_01421	2.02e-249	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
DCGOIPII_01422	3.92e-123	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DCGOIPII_01423	1.63e-154	ymfM	-	-	S	ko:K15539	-	ko00000	Helix-turn-helix domain
DCGOIPII_01424	6.87e-172	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
DCGOIPII_01425	5.49e-301	ymfH	-	-	S	-	-	-	Peptidase M16
DCGOIPII_01426	6.96e-283	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
DCGOIPII_01427	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
DCGOIPII_01428	3.12e-91	-	-	-	S	-	-	-	Protein of unknown function (DUF1149)
DCGOIPII_01429	2.12e-136	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
DCGOIPII_01430	2.19e-270	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
DCGOIPII_01431	1.99e-87	srlB	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
DCGOIPII_01432	5.86e-255	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
DCGOIPII_01433	2.66e-122	-	-	-	S	-	-	-	SNARE associated Golgi protein
DCGOIPII_01434	0.0	mycA	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
DCGOIPII_01435	9.29e-220	rluD2	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
DCGOIPII_01436	1.91e-195	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DCGOIPII_01437	1.7e-147	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
DCGOIPII_01438	4.21e-144	-	-	-	S	-	-	-	CYTH
DCGOIPII_01439	1.41e-148	yjbH	-	-	Q	-	-	-	Thioredoxin
DCGOIPII_01440	6.73e-208	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
DCGOIPII_01441	1.5e-178	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
DCGOIPII_01442	6.28e-87	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
DCGOIPII_01443	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DCGOIPII_01444	1.29e-54	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
DCGOIPII_01445	2.6e-37	-	-	-	-	-	-	-	-
DCGOIPII_01446	0.0	clpE	-	-	O	ko:K03697	-	ko00000,ko03110	Belongs to the ClpA ClpB family
DCGOIPII_01447	5.71e-58	XK27_09445	-	-	S	-	-	-	Domain of unknown function (DUF1827)
DCGOIPII_01448	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
DCGOIPII_01449	1.24e-181	hlyX	-	-	S	ko:K03699	-	ko00000,ko02042	Transporter associated domain
DCGOIPII_01450	3.85e-98	-	-	-	-	-	-	-	-
DCGOIPII_01451	1.74e-111	-	-	-	-	-	-	-	-
DCGOIPII_01452	5.86e-187	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
DCGOIPII_01453	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DCGOIPII_01454	1.33e-226	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
DCGOIPII_01455	7.74e-61	-	-	-	-	-	-	-	-
DCGOIPII_01456	1.06e-278	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
DCGOIPII_01457	7.2e-264	mvaA	1.1.1.88, 2.3.1.9	-	C	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the HMG-CoA reductase family
DCGOIPII_01458	1.81e-274	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
DCGOIPII_01459	1.6e-215	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
DCGOIPII_01460	3.44e-209	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
DCGOIPII_01461	2.45e-211	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
DCGOIPII_01462	5.14e-105	ykuP	-	-	C	ko:K03839	-	ko00000	Flavodoxin
DCGOIPII_01463	3.7e-113	gtcA1	-	-	S	-	-	-	Teichoic acid glycosylation protein
DCGOIPII_01464	1.62e-278	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
DCGOIPII_01466	1.15e-314	chbC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DCGOIPII_01467	5.96e-283	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
DCGOIPII_01468	7.44e-168	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
DCGOIPII_01469	1.29e-295	-	-	-	E	ko:K03294	-	ko00000	amino acid
DCGOIPII_01470	0.0	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
DCGOIPII_01471	4.8e-66	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
DCGOIPII_01472	4.43e-29	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
DCGOIPII_01473	9.7e-309	-	-	-	V	-	-	-	MatE
DCGOIPII_01474	2.32e-28	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
DCGOIPII_01475	5.88e-132	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
DCGOIPII_01476	2.33e-110	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
DCGOIPII_01477	0.0	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
DCGOIPII_01478	8.59e-133	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
DCGOIPII_01479	0.0	yhdP	-	-	S	-	-	-	Transporter associated domain
DCGOIPII_01480	7.48e-155	-	-	-	C	-	-	-	nitroreductase
DCGOIPII_01481	1.76e-52	-	-	-	-	-	-	-	-
DCGOIPII_01482	1.96e-113	ptbA	2.7.1.208	-	G	ko:K02755,ko:K02777,ko:K20107,ko:K20108	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
DCGOIPII_01483	1.52e-103	-	-	-	-	-	-	-	-
DCGOIPII_01484	5.9e-191	glvR	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
DCGOIPII_01485	0.0	glvC	2.7.1.208	-	G	ko:K02749,ko:K02750	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
DCGOIPII_01486	1.2e-194	-	-	-	S	-	-	-	hydrolase
DCGOIPII_01487	4.36e-204	-	-	-	S	-	-	-	Phospholipase, patatin family
DCGOIPII_01488	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
DCGOIPII_01489	2.68e-175	-	-	-	K	ko:K22103	-	ko00000,ko03000	DeoR C terminal sensor domain
DCGOIPII_01490	2.9e-79	-	-	-	S	-	-	-	Enterocin A Immunity
DCGOIPII_01491	1.84e-197	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
DCGOIPII_01492	3.83e-173	gntR	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
DCGOIPII_01493	4.28e-224	rihC	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
DCGOIPII_01494	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
DCGOIPII_01495	3.83e-163	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
DCGOIPII_01496	4.22e-215	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DCGOIPII_01497	1.04e-208	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
DCGOIPII_01498	2.2e-308	srrA1	-	-	G	ko:K02027,ko:K17244	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
DCGOIPII_01499	3.52e-296	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
DCGOIPII_01500	3.41e-207	-	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
DCGOIPII_01501	1.79e-74	-	-	-	L	-	-	-	Resolvase, N-terminal
DCGOIPII_01502	2.55e-212	-	-	-	S	-	-	-	Protein of unknown function (DUF2974)
DCGOIPII_01503	3.65e-141	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
DCGOIPII_01504	1.5e-122	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
DCGOIPII_01505	3.16e-192	glnH	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
DCGOIPII_01506	9.75e-174	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
DCGOIPII_01507	1.92e-17	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Zeta toxin
DCGOIPII_01508	3.47e-94	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Zeta toxin
DCGOIPII_01509	0.0	-	-	-	G	-	-	-	MFS/sugar transport protein
DCGOIPII_01510	1.79e-131	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
DCGOIPII_01511	0.0	XK27_09605	-	-	V	ko:K18892	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter transmembrane region
DCGOIPII_01512	0.0	XK27_09600	-	-	V	ko:K06147,ko:K18891	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
DCGOIPII_01513	2.53e-106	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
DCGOIPII_01514	5.02e-189	peb1A	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
DCGOIPII_01515	6.43e-167	-	-	-	F	-	-	-	glutamine amidotransferase
DCGOIPII_01516	2.92e-313	steT	-	-	E	ko:K03294	-	ko00000	amino acid
DCGOIPII_01517	3.63e-305	steT	-	-	E	ko:K03294	-	ko00000	amino acid
DCGOIPII_01518	4.99e-182	-	-	-	-	-	-	-	-
DCGOIPII_01519	4.99e-222	ydhF	-	-	S	-	-	-	Aldo keto reductase
DCGOIPII_01520	0.0	ykpA	-	-	S	-	-	-	ABC transporter, ATP-binding protein
DCGOIPII_01521	1.07e-266	pepA	-	-	E	-	-	-	M42 glutamyl aminopeptidase
DCGOIPII_01522	1.98e-51	-	-	-	-	-	-	-	-
DCGOIPII_01523	7.33e-59	-	-	-	-	-	-	-	-
DCGOIPII_01524	8.94e-171	-	-	-	-	-	-	-	-
DCGOIPII_01525	6.86e-276	pmrA	-	-	EGP	ko:K08161	-	ko00000,ko02000	MFS_1 like family
DCGOIPII_01526	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
DCGOIPII_01527	8.71e-117	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
DCGOIPII_01528	2.35e-303	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
DCGOIPII_01529	0.0	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative DNA-binding domain
DCGOIPII_01530	8.97e-47	-	-	-	-	-	-	-	-
DCGOIPII_01531	8.8e-202	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
DCGOIPII_01532	1.28e-33	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
DCGOIPII_01534	2.11e-259	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
DCGOIPII_01535	2.37e-118	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
DCGOIPII_01536	6.13e-110	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
DCGOIPII_01537	0.0	-	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
DCGOIPII_01538	1.52e-119	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
DCGOIPII_01539	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
DCGOIPII_01544	1.42e-122	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
DCGOIPII_01545	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DCGOIPII_01546	1.18e-255	flp	-	-	V	-	-	-	Beta-lactamase
DCGOIPII_01547	2.65e-291	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
DCGOIPII_01548	7.89e-29	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
DCGOIPII_01549	2.34e-94	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
DCGOIPII_01550	2.83e-66	-	-	-	-	-	-	-	-
DCGOIPII_01551	4.83e-144	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
DCGOIPII_01552	4.45e-84	-	-	-	K	-	-	-	transcriptional regulator
DCGOIPII_01554	9.65e-220	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
DCGOIPII_01555	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DCGOIPII_01556	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
DCGOIPII_01557	5.42e-67	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DCGOIPII_01558	1.04e-266	camS	-	-	S	-	-	-	sex pheromone
DCGOIPII_01559	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
DCGOIPII_01560	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
DCGOIPII_01561	3.29e-127	acmA	3.2.1.17, 3.2.1.96	-	NU	ko:K01185,ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	mannosyl-glycoprotein
DCGOIPII_01563	3.29e-77	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
DCGOIPII_01564	3.17e-172	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
DCGOIPII_01565	0.0	epsU	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
DCGOIPII_01566	9.16e-287	-	-	-	M	-	-	-	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
DCGOIPII_01567	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
DCGOIPII_01568	1.91e-195	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
DCGOIPII_01569	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
DCGOIPII_01570	1.77e-262	-	-	-	M	-	-	-	Glycosyl transferases group 1
DCGOIPII_01571	5.23e-172	tagA	2.4.1.187	GT26	F	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
DCGOIPII_01572	2.13e-92	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Glycerol-3-phosphate cytidylyltransferase
DCGOIPII_01573	1.87e-159	gntR1	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
DCGOIPII_01574	5.33e-233	-	-	-	-	-	-	-	-
DCGOIPII_01575	0.0	oppA2	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
DCGOIPII_01578	1.83e-313	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	NADH oxidase
DCGOIPII_01580	3.9e-308	slpX	-	-	S	-	-	-	SLAP domain
DCGOIPII_01581	1.43e-186	-	-	-	K	-	-	-	SIS domain
DCGOIPII_01582	3.27e-158	rpiA1	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
DCGOIPII_01583	1.85e-240	XK27_10475	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
DCGOIPII_01584	1.38e-275	araT	2.6.1.57	-	E	ko:K00832,ko:K00841	ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
DCGOIPII_01586	0.0	gtfA	2.4.1.7	GH13	G	ko:K00690	ko00500,map00500	ko00000,ko00001,ko01000	Sucrose glucosyltransferase
DCGOIPII_01587	7.39e-231	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
DCGOIPII_01588	2.38e-16	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ATPase activity
DCGOIPII_01589	7.82e-284	sacA	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Glycosyl hydrolases family 32
DCGOIPII_01590	6.07e-192	msmG	-	-	G	ko:K02026,ko:K10122	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
DCGOIPII_01591	1.03e-208	-	-	-	P	ko:K10121	-	ko00000,ko00002,ko02000	ABC-type sugar transport systems, permease components
DCGOIPII_01592	2.68e-292	-	-	-	G	ko:K02027,ko:K10120	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
DCGOIPII_01593	2.81e-232	lacI	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
DCGOIPII_01594	4.34e-167	glpQ1	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
DCGOIPII_01595	1.61e-145	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
DCGOIPII_01596	2.1e-141	-	-	-	G	-	-	-	Histidine phosphatase superfamily (branch 1)
DCGOIPII_01597	3.51e-142	-	-	-	G	-	-	-	Phosphoglycerate mutase family
DCGOIPII_01598	4.6e-249	-	-	-	D	-	-	-	nuclear chromosome segregation
DCGOIPII_01599	3.63e-128	-	-	-	M	-	-	-	LysM domain protein
DCGOIPII_01600	7.87e-303	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DCGOIPII_01601	1.25e-17	-	-	-	-	-	-	-	-
DCGOIPII_01602	1.95e-220	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase
DCGOIPII_01603	2.54e-42	-	-	-	-	-	-	-	-
DCGOIPII_01605	1.09e-91	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
DCGOIPII_01606	1.31e-146	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
DCGOIPII_01607	1.16e-79	psiE	-	-	S	ko:K13256	-	ko00000	Phosphate-starvation-inducible E
DCGOIPII_01609	1.74e-183	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
DCGOIPII_01610	1.59e-78	-	-	-	-	-	-	-	-
DCGOIPII_01611	0.0	-	-	-	L	ko:K03724	-	ko00000,ko01000,ko03400	DEAD DEAH box helicase
DCGOIPII_01612	0.0	-	-	-	P	-	-	-	P-loop Domain of unknown function (DUF2791)
DCGOIPII_01613	0.0	-	-	-	S	-	-	-	TerB-C domain
DCGOIPII_01614	0.0	pckA	4.1.1.49	-	H	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Phosphoenolpyruvate carboxykinase
DCGOIPII_01615	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
DCGOIPII_01617	6.94e-202	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
DCGOIPII_01618	2.07e-92	apfA	3.6.1.61	-	F	ko:K18445	ko00230,map00230	ko00000,ko00001,ko01000	Nudix hydrolase
DCGOIPII_01619	1.43e-42	-	-	-	-	-	-	-	-
DCGOIPII_01620	2.21e-148	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
DCGOIPII_01621	2.28e-69	-	-	-	E	-	-	-	amino acid
DCGOIPII_01622	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
DCGOIPII_01623	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
DCGOIPII_01624	3.59e-21	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
DCGOIPII_01625	1.88e-307	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
DCGOIPII_01626	1.62e-117	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
DCGOIPII_01627	3.06e-205	-	-	-	K	-	-	-	Transcriptional regulator
DCGOIPII_01628	2.76e-83	-	-	-	S	-	-	-	Domain of unknown function (DUF956)
DCGOIPII_01629	3.51e-222	manN	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	system, mannose fructose sorbose family IID component
DCGOIPII_01630	9.65e-181	manY	-	-	G	ko:K02746,ko:K02795	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system
DCGOIPII_01631	3.31e-237	manL	2.7.1.191	-	G	ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
DCGOIPII_01633	3.02e-199	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
DCGOIPII_01634	9.49e-57	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
DCGOIPII_01635	3.14e-69	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
DCGOIPII_01636	0.0	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
DCGOIPII_01637	1.23e-129	yjcK	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
DCGOIPII_01638	3.2e-143	-	-	-	S	-	-	-	SNARE associated Golgi protein
DCGOIPII_01639	1.77e-194	-	-	-	I	-	-	-	alpha/beta hydrolase fold
DCGOIPII_01640	9.87e-203	plcR	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
DCGOIPII_01641	1.19e-19	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
DCGOIPII_01642	1.41e-37	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
DCGOIPII_01643	1.72e-119	-	-	-	F	-	-	-	Nucleoside 2-deoxyribosyltransferase
DCGOIPII_01644	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
DCGOIPII_01645	1.2e-220	-	-	-	-	-	-	-	-
DCGOIPII_01646	1.04e-30	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
DCGOIPII_01648	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
DCGOIPII_01649	3.76e-128	yobS	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
DCGOIPII_01650	1.89e-205	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
DCGOIPII_01651	1.4e-207	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
DCGOIPII_01652	2.12e-310	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
DCGOIPII_01653	0.0	-	-	-	S	-	-	-	Zn-dependent metallo-hydrolase RNA specificity domain
DCGOIPII_01654	5.62e-187	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
DCGOIPII_01655	1.64e-202	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	ABC-type sugar transport systems, permease components
DCGOIPII_01656	4.32e-258	malK	-	-	P	ko:K10112,ko:K17240	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
DCGOIPII_01657	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
DCGOIPII_01658	7.24e-204	endA	-	-	F	ko:K15051	-	ko00000	DNA RNA non-specific endonuclease
DCGOIPII_01659	1.1e-231	-	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	EXOIII
DCGOIPII_01660	8.83e-204	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
DCGOIPII_01661	2.23e-150	yviA	-	-	S	-	-	-	Protein of unknown function (DUF421)
DCGOIPII_01662	1.3e-94	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
DCGOIPII_01663	2.32e-181	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
DCGOIPII_01665	4.08e-169	-	-	-	S	-	-	-	PAS domain
DCGOIPII_01666	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
DCGOIPII_01667	3.53e-226	pepR	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
DCGOIPII_01668	5.21e-140	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
DCGOIPII_01669	1.69e-230	-	-	-	T	-	-	-	GHKL domain
DCGOIPII_01670	2.9e-89	ykoJ	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
DCGOIPII_01671	5.41e-77	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
DCGOIPII_01672	1.27e-106	XK27_03150	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
DCGOIPII_01673	2.03e-83	yybA	-	-	K	-	-	-	Transcriptional regulator
DCGOIPII_01674	8.92e-305	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter transmembrane region
DCGOIPII_01675	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
DCGOIPII_01676	6.95e-29	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
DCGOIPII_01677	1.02e-74	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
DCGOIPII_01679	5.16e-135	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DCGOIPII_01680	1.43e-220	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
DCGOIPII_01681	1.13e-126	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
DCGOIPII_01682	2.34e-97	yjcF	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
DCGOIPII_01683	2.58e-186	aatB	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
DCGOIPII_01684	5.9e-137	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
DCGOIPII_01685	2.2e-141	yecS_2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
DCGOIPII_01686	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
DCGOIPII_01687	2.16e-83	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
DCGOIPII_01688	7.53e-163	gpm2	-	-	G	-	-	-	Phosphoglycerate mutase family
DCGOIPII_01689	1.79e-306	-	-	-	S	-	-	-	response to antibiotic
DCGOIPII_01690	6.02e-117	-	-	-	-	-	-	-	-
DCGOIPII_01691	0.0	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
DCGOIPII_01692	6.28e-87	-	2.7.1.191	-	G	ko:K02793	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
DCGOIPII_01693	5.1e-57	-	-	-	-	-	-	-	-
DCGOIPII_01694	6.6e-14	-	-	-	-	-	-	-	-
DCGOIPII_01695	1.35e-238	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase, type I
DCGOIPII_01696	1.43e-176	-	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
DCGOIPII_01697	0.0	malH	3.2.1.122	GH4	G	ko:K01232	ko00500,map00500	ko00000,ko00001,ko01000	Family 4 glycosyl hydrolase C-terminal domain
DCGOIPII_01698	2.15e-197	-	-	-	-	-	-	-	-
DCGOIPII_01699	3.32e-13	-	-	-	-	-	-	-	-
DCGOIPII_01700	6.57e-113	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
DCGOIPII_01701	1.18e-136	-	-	-	K	ko:K06977	-	ko00000	acetyltransferase
DCGOIPII_01704	3.67e-92	-	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
DCGOIPII_01705	1.36e-136	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
DCGOIPII_01706	0.0	XK27_00340	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
DCGOIPII_01707	6.38e-95	-	-	-	L	-	-	-	Transposase DDE domain
DCGOIPII_01708	1.73e-13	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
DCGOIPII_01709	2.22e-260	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
DCGOIPII_01710	4.96e-42	-	-	-	S	ko:K06915	-	ko00000	Domain of unknown function DUF87
DCGOIPII_01711	9.54e-57	-	-	-	S	-	-	-	SIR2-like domain
DCGOIPII_01712	8.76e-83	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
DCGOIPII_01713	3.46e-80	-	-	-	M	-	-	-	Glycosyltransferase, group 2 family protein
DCGOIPII_01714	2.45e-97	-	-	-	M	-	-	-	Capsular polysaccharide synthesis protein
DCGOIPII_01715	1.17e-102	-	-	-	M	-	-	-	Glycosyltransferase, group 2 family protein
DCGOIPII_01716	2.39e-222	cps4F	-	-	M	-	-	-	Glycosyl transferases group 1
DCGOIPII_01717	1.43e-140	epsE2	-	-	M	-	-	-	Bacterial sugar transferase
DCGOIPII_01718	3.16e-184	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
DCGOIPII_01719	1.93e-155	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
DCGOIPII_01720	8.55e-191	epsB	-	-	M	-	-	-	biosynthesis protein
DCGOIPII_01721	1.53e-245	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
DCGOIPII_01722	2.09e-63	yoeB	-	-	S	ko:K19158	-	ko00000,ko01000,ko02048	YoeB-like toxin of bacterial type II toxin-antitoxin system
DCGOIPII_01723	9.52e-56	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
DCGOIPII_01725	1.27e-289	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DCGOIPII_01726	3.61e-223	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
DCGOIPII_01728	4.27e-54	-	-	-	-	-	-	-	-
DCGOIPII_01729	6.38e-172	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
DCGOIPII_01730	2.59e-174	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
DCGOIPII_01731	1.22e-120	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
DCGOIPII_01732	2.04e-122	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase homologues.
DCGOIPII_01733	7.8e-57	-	-	-	-	-	-	-	-
DCGOIPII_01734	0.0	-	-	-	S	-	-	-	O-antigen ligase like membrane protein
DCGOIPII_01735	8.77e-144	-	-	-	-	-	-	-	-
DCGOIPII_01736	1.17e-101	nrdI	-	-	F	ko:K03647	-	ko00000	NrdI Flavodoxin like
DCGOIPII_01737	5.63e-226	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DCGOIPII_01738	4.73e-101	-	-	-	-	-	-	-	-
DCGOIPII_01739	2.72e-144	-	-	-	S	-	-	-	Peptidase_C39 like family
DCGOIPII_01740	7.36e-109	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
DCGOIPII_01741	2.2e-175	-	-	-	S	-	-	-	Putative threonine/serine exporter
DCGOIPII_01742	0.0	-	-	-	S	-	-	-	ABC transporter
DCGOIPII_01743	1.64e-81	-	-	-	-	-	-	-	-
DCGOIPII_01744	2.55e-131	rimL	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
DCGOIPII_01745	2.8e-160	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
DCGOIPII_01746	1.01e-274	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
DCGOIPII_01747	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
DCGOIPII_01748	8.61e-54	-	-	-	S	-	-	-	Enterocin A Immunity
DCGOIPII_01749	1.03e-173	-	-	-	S	ko:K07052	-	ko00000	CAAX amino terminal protease
DCGOIPII_01753	6.21e-60	-	-	-	V	ko:K20345	ko02024,map02024	ko00000,ko00001,ko02000	HlyD family secretion protein
DCGOIPII_01754	0.0	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
DCGOIPII_01755	5.74e-102	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
DCGOIPII_01756	6.9e-97	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
DCGOIPII_01759	2.02e-35	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
DCGOIPII_01760	9.66e-12	-	-	-	-	-	-	-	-
DCGOIPII_01761	2.67e-273	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
DCGOIPII_01762	3.54e-106	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
DCGOIPII_01763	0.0	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
DCGOIPII_01764	1.85e-171	znuB	-	-	U	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
DCGOIPII_01765	1.63e-152	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
DCGOIPII_01766	2.96e-210	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
DCGOIPII_01767	4.47e-56	-	-	-	K	ko:K21903	-	ko00000,ko03000	helix_turn_helix, Arsenical Resistance Operon Repressor
DCGOIPII_01768	0.0	fruA	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase System
DCGOIPII_01769	2.18e-215	pfkB	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family. LacC subfamily
DCGOIPII_01770	3.14e-175	fruR	-	-	K	ko:K03436	-	ko00000,ko03000	DeoR C terminal sensor domain
DCGOIPII_01771	1.14e-275	natB	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
DCGOIPII_01772	2e-208	natA	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
DCGOIPII_01773	2.18e-41	-	-	-	-	-	-	-	-
DCGOIPII_01774	1.84e-07	-	-	-	-	-	-	-	-
DCGOIPII_01775	1.19e-88	-	-	-	-	-	-	-	-
DCGOIPII_01776	1.92e-34	-	-	-	-	-	-	-	-
DCGOIPII_01777	6.32e-42	-	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
DCGOIPII_01778	2.67e-113	-	-	-	-	-	-	-	-
DCGOIPII_01782	6.22e-176	blpT	-	-	-	-	-	-	-
DCGOIPII_01783	7.86e-138	mesE	-	-	M	ko:K12293,ko:K20345	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko02000	Transport protein ComB
DCGOIPII_01784	0.0	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
DCGOIPII_01785	7.16e-38	-	-	-	-	-	-	-	-
DCGOIPII_01786	3.2e-65	blpT	-	-	-	-	-	-	-
DCGOIPII_01788	4.3e-187	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
DCGOIPII_01789	7.1e-293	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
DCGOIPII_01791	1.72e-13	-	-	-	-	-	-	-	-
DCGOIPII_01792	2.61e-280	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
DCGOIPII_01794	4.73e-88	-	-	-	-	-	-	-	-
DCGOIPII_01795	0.000961	-	-	-	-	-	-	-	-
DCGOIPII_01796	1.47e-37	-	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
DCGOIPII_01797	7.51e-98	-	-	-	-	-	-	-	-
DCGOIPII_01798	8.52e-21	-	-	-	-	-	-	-	-
DCGOIPII_01799	0.0	agl	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
DCGOIPII_01800	0.0	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
DCGOIPII_01801	4.48e-34	-	-	-	-	-	-	-	-
DCGOIPII_01802	2.17e-35	-	-	-	-	-	-	-	-
DCGOIPII_01803	6.49e-45	-	-	-	-	-	-	-	-
DCGOIPII_01804	1.4e-69	-	-	-	S	-	-	-	Enterocin A Immunity
DCGOIPII_01805	4.4e-178	racD	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
DCGOIPII_01806	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DCGOIPII_01807	1.08e-269	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
DCGOIPII_01808	8.32e-157	vanR	-	-	K	-	-	-	response regulator
DCGOIPII_01810	0.0	ndvA	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
DCGOIPII_01811	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter, ATP-binding protein
DCGOIPII_01812	3.77e-174	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
DCGOIPII_01813	6.88e-257	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
DCGOIPII_01814	1.1e-59	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
DCGOIPII_01815	7.41e-198	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
DCGOIPII_01816	4.99e-178	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
DCGOIPII_01817	7.14e-192	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
DCGOIPII_01818	3.66e-166	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
DCGOIPII_01819	2.99e-75	cvpA	-	-	S	-	-	-	Colicin V production protein
DCGOIPII_01820	5.24e-230	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
DCGOIPII_01821	9.48e-194	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
DCGOIPII_01822	2.21e-127	azr	1.5.1.36	-	S	ko:K22394	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
DCGOIPII_01823	1.39e-124	azo1	1.5.1.36, 1.7.1.6	-	S	ko:K03206,ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
DCGOIPII_01824	1.07e-144	-	-	-	K	-	-	-	WHG domain
DCGOIPII_01825	0.0	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
DCGOIPII_01826	3.93e-198	metB	2.5.1.48	-	E	ko:K01739	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Cys/Met metabolism PLP-dependent enzyme
DCGOIPII_01827	4.3e-197	mccB	4.4.1.1, 4.4.1.2, 4.4.1.8	-	E	ko:K01760,ko:K17217	ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	cystathionine
DCGOIPII_01828	1e-125	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
DCGOIPII_01829	2.12e-132	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
DCGOIPII_01830	4.99e-232	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
DCGOIPII_01831	7.8e-124	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
DCGOIPII_01832	1.66e-144	-	-	-	G	-	-	-	phosphoglycerate mutase
DCGOIPII_01833	2.92e-182	-	-	-	S	ko:K06889	-	ko00000	Alpha/beta hydrolase family
DCGOIPII_01834	6.15e-185	XK27_08125	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
DCGOIPII_01835	2.24e-154	-	-	-	-	-	-	-	-
DCGOIPII_01836	2.25e-202	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
DCGOIPII_01837	2.26e-254	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
DCGOIPII_01838	4.34e-22	-	-	-	-	-	-	-	-
DCGOIPII_01839	2.57e-120	-	-	-	S	-	-	-	membrane
DCGOIPII_01840	2.25e-93	-	-	-	K	-	-	-	LytTr DNA-binding domain
DCGOIPII_01843	1.14e-51	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
DCGOIPII_01844	1.18e-43	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
DCGOIPII_01846	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
DCGOIPII_01847	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
DCGOIPII_01848	2.2e-79	lysM	-	-	M	-	-	-	LysM domain
DCGOIPII_01849	9.28e-224	-	-	-	-	-	-	-	-
DCGOIPII_01850	1.54e-287	mdtG2	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
DCGOIPII_01851	1.36e-116	ymdB	-	-	S	-	-	-	Macro domain protein
DCGOIPII_01856	8.84e-82	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
DCGOIPII_01857	2.49e-100	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
DCGOIPII_01858	9.42e-261	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DCGOIPII_01859	6.36e-230	yvdE	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
DCGOIPII_01860	7.48e-188	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
DCGOIPII_01861	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
DCGOIPII_01862	2.61e-195	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
DCGOIPII_01863	7.13e-123	-	-	-	-	-	-	-	-
DCGOIPII_01864	6.45e-32	-	-	-	-	-	-	-	-
DCGOIPII_01865	1.08e-181	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
DCGOIPII_01866	4.17e-63	yoeB	-	-	S	ko:K19158	-	ko00000,ko01000,ko02048	YoeB-like toxin of bacterial type II toxin-antitoxin system
DCGOIPII_01867	2.45e-58	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
DCGOIPII_01868	1.07e-89	-	-	-	L	-	-	-	RelB antitoxin
DCGOIPII_01870	5.91e-166	cobQ	-	-	S	ko:K07009	-	ko00000	glutamine amidotransferase
DCGOIPII_01871	7.36e-109	-	-	-	M	-	-	-	NlpC/P60 family
DCGOIPII_01874	1.25e-52	-	-	-	-	-	-	-	-
DCGOIPII_01875	9.86e-210	-	-	-	EG	-	-	-	EamA-like transporter family
DCGOIPII_01876	9.95e-210	-	-	-	EG	-	-	-	EamA-like transporter family
DCGOIPII_01877	1.05e-151	yicL	-	-	EG	-	-	-	EamA-like transporter family
DCGOIPII_01878	5.38e-137	-	-	-	-	-	-	-	-
DCGOIPII_01879	5.25e-142	-	-	-	-	-	-	-	-
DCGOIPII_01880	1.84e-238	-	-	-	S	-	-	-	DUF218 domain
DCGOIPII_01881	0.0	yheS_2	-	-	S	ko:K18231,ko:K19349	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ATPases associated with a variety of cellular activities
DCGOIPII_01882	5.16e-115	-	-	-	-	-	-	-	-
DCGOIPII_01883	6.33e-74	-	-	-	-	-	-	-	-
DCGOIPII_01884	5.2e-315	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DCGOIPII_01885	0.0	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
DCGOIPII_01886	4.04e-240	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
DCGOIPII_01889	3.05e-262	-	4.2.1.126	-	S	ko:K07106,ko:K09963	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Bacterial protein of unknown function (DUF871)
DCGOIPII_01890	2.17e-243	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
DCGOIPII_01891	3.35e-293	-	-	-	E	-	-	-	amino acid
DCGOIPII_01892	1.99e-180	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
DCGOIPII_01894	3.94e-157	-	-	-	V	-	-	-	HNH endonuclease
DCGOIPII_01895	5.95e-33	-	-	-	V	-	-	-	HNH endonuclease
DCGOIPII_01896	6.36e-173	-	-	-	S	-	-	-	PFAM Archaeal ATPase
DCGOIPII_01897	5.27e-314	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
DCGOIPII_01898	2.53e-301	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
DCGOIPII_01899	4.18e-148	sipS3	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
DCGOIPII_01900	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	AAA domain (Cdc48 subfamily)
DCGOIPII_01901	3.62e-215	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
DCGOIPII_01902	1.08e-304	pts13C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DCGOIPII_01903	2.49e-163	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
DCGOIPII_01904	0.0	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
DCGOIPII_01905	1.96e-49	-	-	-	-	-	-	-	-
DCGOIPII_01906	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
DCGOIPII_01907	5.22e-181	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
DCGOIPII_01908	3.98e-169	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
DCGOIPII_01909	9.35e-226	pbpX2	-	-	V	-	-	-	Beta-lactamase
DCGOIPII_01910	7.41e-313	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
DCGOIPII_01911	4.98e-48	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
DCGOIPII_01912	1.53e-306	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
DCGOIPII_01913	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
DCGOIPII_01914	9.18e-27	-	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
DCGOIPII_01915	6.47e-64	-	-	-	-	-	-	-	-
DCGOIPII_01916	1.89e-276	-	-	-	S	-	-	-	Membrane
DCGOIPII_01917	3.41e-107	ykuL	-	-	S	-	-	-	(CBS) domain
DCGOIPII_01918	0.0	cadA	-	-	P	-	-	-	P-type ATPase
DCGOIPII_01919	1.4e-263	napA	-	-	P	-	-	-	Sodium/hydrogen exchanger family
DCGOIPII_01920	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
DCGOIPII_01921	2.35e-101	-	-	-	S	-	-	-	Putative adhesin
DCGOIPII_01922	6.95e-203	mutR	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
DCGOIPII_01923	9.39e-71	-	-	-	-	-	-	-	-
DCGOIPII_01924	1.02e-156	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
DCGOIPII_01925	8.9e-249	-	-	-	S	-	-	-	DUF218 domain
DCGOIPII_01926	0.0	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
DCGOIPII_01927	0.0	ppc	4.1.1.31	-	H	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
DCGOIPII_01928	7.18e-131	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
DCGOIPII_01929	1.69e-256	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
DCGOIPII_01930	3.28e-257	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
DCGOIPII_01931	0.0	mglA	3.6.3.17	-	S	ko:K02056,ko:K06400	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
DCGOIPII_01932	8.8e-262	mglC	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
DCGOIPII_01933	3.63e-221	yufQ	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
DCGOIPII_01934	2.64e-206	-	-	-	S	-	-	-	Aldo/keto reductase family
DCGOIPII_01935	1.15e-173	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
DCGOIPII_01936	9.85e-154	dak	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
DCGOIPII_01937	8.07e-164	dgk2	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
DCGOIPII_01938	2.9e-88	-	-	-	-	-	-	-	-
DCGOIPII_01939	9.32e-182	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
DCGOIPII_01940	3.94e-291	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
DCGOIPII_01943	1.73e-160	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
DCGOIPII_01944	2.11e-274	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
DCGOIPII_01945	3.69e-54	-	-	-	L	ko:K07473	-	ko00000,ko02048	Addiction module antitoxin, RelB DinJ family
DCGOIPII_01946	5.05e-11	-	-	-	-	-	-	-	-
DCGOIPII_01947	1.02e-60	-	-	-	S	ko:K07124	-	ko00000	Enoyl-(Acyl carrier protein) reductase
DCGOIPII_01948	9.55e-53	-	-	-	S	ko:K07124	-	ko00000	Enoyl-(Acyl carrier protein) reductase
DCGOIPII_01949	1.53e-65	yneE	-	-	K	-	-	-	Transcriptional regulator
DCGOIPII_01950	4.71e-81	yneE	-	-	K	-	-	-	Transcriptional regulator
DCGOIPII_01951	1.74e-284	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
DCGOIPII_01952	1.53e-169	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
DCGOIPII_01953	5.43e-294	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
DCGOIPII_01954	2.47e-28	-	-	-	-	-	-	-	-
DCGOIPII_01955	8.9e-96	copY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Penicillinase repressor
DCGOIPII_01956	3.45e-83	-	-	-	S	-	-	-	Cupredoxin-like domain
DCGOIPII_01957	4.44e-65	-	-	-	S	-	-	-	Cupredoxin-like domain
DCGOIPII_01958	0.0	copA	3.6.3.3, 3.6.3.5, 3.6.3.54	-	P	ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
DCGOIPII_01959	8.16e-144	crp2	-	-	K	ko:K10914,ko:K21562	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	helix_turn_helix, cAMP Regulatory protein
DCGOIPII_01960	3.14e-137	-	-	-	-	-	-	-	-
DCGOIPII_01961	1.83e-316	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
DCGOIPII_01962	6.46e-27	-	-	-	-	-	-	-	-
DCGOIPII_01963	8.24e-271	-	-	-	-	-	-	-	-
DCGOIPII_01964	5.36e-174	-	-	-	S	-	-	-	SLAP domain
DCGOIPII_01965	1.14e-154	-	-	-	S	-	-	-	SLAP domain
DCGOIPII_01966	4.54e-135	-	-	-	S	-	-	-	Bacteriocin helveticin-J
DCGOIPII_01967	5.78e-59	-	-	-	-	-	-	-	-
DCGOIPII_01968	8.29e-76	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
DCGOIPII_01969	1.21e-42	-	-	-	E	-	-	-	Zn peptidase
DCGOIPII_01970	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
DCGOIPII_01971	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
DCGOIPII_01972	9.7e-40	-	-	-	-	-	-	-	-
DCGOIPII_01973	0.0	pox1	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
DCGOIPII_01974	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
DCGOIPII_01975	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
DCGOIPII_01976	3.37e-192	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
DCGOIPII_01977	1.87e-81	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
DCGOIPII_01978	3.26e-23	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
DCGOIPII_01979	1.83e-316	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
DCGOIPII_01980	1.64e-244	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
DCGOIPII_01981	1.13e-48	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain protein YaaA
DCGOIPII_01982	1.79e-268	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
DCGOIPII_01983	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DCGOIPII_01984	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DCGOIPII_01985	1.93e-65	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
DCGOIPII_01986	7.46e-108	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
DCGOIPII_01987	1.89e-47	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
DCGOIPII_01988	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
DCGOIPII_01989	3.87e-97	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
DCGOIPII_01990	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
DCGOIPII_01992	8.56e-202	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
DCGOIPII_01993	3.93e-118	-	-	-	G	-	-	-	FGGY family of carbohydrate kinases, C-terminal domain
DCGOIPII_01994	2.59e-219	-	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
DCGOIPII_01995	5.21e-29	-	2.7.1.200	-	G	ko:K02774	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
DCGOIPII_01996	1.14e-44	-	2.7.1.200	-	GT	ko:K02773	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
DCGOIPII_01997	1.75e-145	-	-	-	G	-	-	-	Fructose-bisphosphate aldolase class-II
DCGOIPII_01998	4.24e-78	farR	-	-	K	-	-	-	Helix-turn-helix domain
DCGOIPII_02000	1.06e-30	-	-	-	N	-	-	-	PFAM Uncharacterised protein family UPF0150
DCGOIPII_02001	1.11e-152	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
DCGOIPII_02003	4.32e-190	-	-	-	V	-	-	-	Abi-like protein
DCGOIPII_02004	6.27e-161	-	-	-	L	-	-	-	Transposase
DCGOIPII_02005	1.39e-197	malG	-	-	P	ko:K15772	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
DCGOIPII_02006	0.0	malF	-	-	P	ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
DCGOIPII_02007	5.5e-282	-	-	-	G	ko:K15770	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
DCGOIPII_02008	2.34e-265	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
DCGOIPII_02009	9.37e-150	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
DCGOIPII_02010	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
DCGOIPII_02011	9.79e-45	nplT	3.2.1.133, 3.2.1.135, 3.2.1.54	GH13	G	ko:K01208	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
DCGOIPII_02013	1.42e-74	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
DCGOIPII_02014	3.39e-253	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
DCGOIPII_02015	2.28e-252	-	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
DCGOIPII_02017	1.74e-61	pglI	2.4.1.293	GT2	M	ko:K17250	-	ko00000,ko01000,ko01003	transferase activity, transferring glycosyl groups
DCGOIPII_02019	1.7e-65	-	-	-	L	ko:K19091	-	ko00000,ko01000,ko02048	CRISPR associated protein Cas6
DCGOIPII_02020	8.77e-147	-	-	-	S	ko:K19088	-	ko00000,ko02048	CRISPR-associated protein (Cas_CXXC_CXXC)
DCGOIPII_02021	1.32e-128	-	-	-	L	ko:K19075	-	ko00000,ko02048	CRISPR-associated negative auto-regulator DevR/Csa2
DCGOIPII_02022	9.91e-90	-	-	-	L	ko:K19090	-	ko00000,ko02048	CRISPR-associated protein Cas5
DCGOIPII_02024	8e-53	-	-	-	S	-	-	-	FRG domain
DCGOIPII_02025	0.0	malA1	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain
DCGOIPII_02026	1e-220	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
DCGOIPII_02027	1.22e-24	-	-	-	V	-	-	-	Type I restriction modification DNA specificity domain
DCGOIPII_02028	4.74e-303	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
DCGOIPII_02029	4.85e-95	-	-	-	M	-	-	-	Rib/alpha-like repeat
DCGOIPII_02030	4.12e-204	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
DCGOIPII_02031	5e-101	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
DCGOIPII_02032	5.89e-172	-	-	-	-	-	-	-	-