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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
CLPCLEEF_00001	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
CLPCLEEF_00002	3.87e-97	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
CLPCLEEF_00003	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
CLPCLEEF_00004	1.94e-217	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, phosphonate, periplasmic substrate-binding protein
CLPCLEEF_00005	2.36e-217	degV1	-	-	S	-	-	-	DegV family
CLPCLEEF_00006	1.07e-171	-	-	-	V	-	-	-	ABC transporter transmembrane region
CLPCLEEF_00007	5.79e-214	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
CLPCLEEF_00008	3.81e-18	-	-	-	S	-	-	-	CsbD-like
CLPCLEEF_00009	2.26e-31	-	-	-	S	-	-	-	Transglycosylase associated protein
CLPCLEEF_00010	5.32e-285	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
CLPCLEEF_00011	4.38e-150	-	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
CLPCLEEF_00014	7.2e-84	-	-	-	-	-	-	-	-
CLPCLEEF_00015	7.06e-110	-	-	-	-	-	-	-	-
CLPCLEEF_00016	1.36e-171	-	-	-	D	-	-	-	Ftsk spoiiie family protein
CLPCLEEF_00017	1.74e-185	-	-	-	S	-	-	-	Replication initiation factor
CLPCLEEF_00018	1.33e-72	-	-	-	-	-	-	-	-
CLPCLEEF_00019	4.04e-36	-	-	-	-	-	-	-	-
CLPCLEEF_00020	3.5e-280	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CLPCLEEF_00022	6.25e-69	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
CLPCLEEF_00023	8.25e-65	-	-	-	V	ko:K01990,ko:K01992	-	ko00000,ko00002,ko02000	Transport permease protein
CLPCLEEF_00025	6.56e-86	sagB	-	-	C	-	-	-	Nitroreductase family
CLPCLEEF_00027	5.93e-127	sagD	-	-	S	-	-	-	YcaO cyclodehydratase, ATP-ad Mg2+-binding
CLPCLEEF_00031	2.41e-39	-	-	-	-	-	-	-	-
CLPCLEEF_00034	4.82e-144	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CLPCLEEF_00035	1.25e-94	-	-	-	K	-	-	-	Helix-turn-helix domain
CLPCLEEF_00037	6.66e-27	-	-	-	S	-	-	-	CAAX protease self-immunity
CLPCLEEF_00038	2.67e-35	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
CLPCLEEF_00040	4.11e-124	potE	-	-	E	-	-	-	thought to be involved in transport amino acids across the membrane
CLPCLEEF_00042	3.17e-189	-	-	-	S	-	-	-	Putative ABC-transporter type IV
CLPCLEEF_00043	5.61e-38	-	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
CLPCLEEF_00044	1.01e-72	-	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
CLPCLEEF_00045	1.09e-148	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CLPCLEEF_00046	3.26e-292	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CLPCLEEF_00047	3e-118	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CLPCLEEF_00048	2.54e-225	ydbI	-	-	K	-	-	-	AI-2E family transporter
CLPCLEEF_00049	1.95e-134	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
CLPCLEEF_00050	2.55e-26	-	-	-	-	-	-	-	-
CLPCLEEF_00051	1.06e-311	-	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
CLPCLEEF_00052	2.81e-102	-	-	-	E	-	-	-	Zn peptidase
CLPCLEEF_00053	1.53e-54	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CLPCLEEF_00054	7.61e-59	-	-	-	-	-	-	-	-
CLPCLEEF_00055	1.08e-79	-	-	-	S	-	-	-	Bacteriocin helveticin-J
CLPCLEEF_00056	3.56e-85	-	-	-	S	-	-	-	SLAP domain
CLPCLEEF_00057	8.58e-60	-	-	-	-	-	-	-	-
CLPCLEEF_00058	8.64e-176	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CLPCLEEF_00059	4.76e-168	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
CLPCLEEF_00060	3.35e-223	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
CLPCLEEF_00061	7.75e-170	ysaA	3.1.3.5, 3.8.1.2	-	S	ko:K01560,ko:K07025,ko:K08723	ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
CLPCLEEF_00062	7.93e-63	-	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
CLPCLEEF_00063	5.49e-97	-	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
CLPCLEEF_00064	9.52e-205	yvgN	-	-	C	-	-	-	Aldo keto reductase
CLPCLEEF_00065	0.0	fusA1	-	-	J	-	-	-	elongation factor G
CLPCLEEF_00066	3.16e-192	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	haloacid dehalogenase-like hydrolase
CLPCLEEF_00067	3.74e-180	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
CLPCLEEF_00069	6.14e-107	-	-	-	-	-	-	-	-
CLPCLEEF_00070	1.67e-95	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
CLPCLEEF_00071	8.44e-65	-	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CLPCLEEF_00072	9.89e-112	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CLPCLEEF_00073	1.98e-47	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CLPCLEEF_00074	4.22e-41	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CLPCLEEF_00075	2.77e-177	fabD	2.3.1.39	-	I	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	Malonyl CoA-acyl carrier protein transacylase
CLPCLEEF_00076	1.4e-137	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	reductase
CLPCLEEF_00077	2.53e-268	fabF	2.3.1.179	-	I	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
CLPCLEEF_00078	3.17e-67	accB	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
CLPCLEEF_00079	7.28e-80	fabZ	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	FabA-like domain
CLPCLEEF_00080	3.44e-300	accC	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Acetyl-CoA carboxylase biotin carboxylase subunit
CLPCLEEF_00081	4.9e-180	accD	2.1.3.15, 6.4.1.2	-	I	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
CLPCLEEF_00082	2.42e-163	accA	2.1.3.15, 6.4.1.2	-	I	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	alpha subunit
CLPCLEEF_00083	1.9e-158	fabI	1.3.1.10, 1.3.1.9	-	I	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl- acyl-carrier-protein reductase NADH
CLPCLEEF_00084	7.01e-103	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
CLPCLEEF_00085	2.27e-245	ldhA	1.1.1.28	-	C	ko:K03778,ko:K18347	ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01504	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CLPCLEEF_00086	1.44e-07	-	-	-	S	-	-	-	YSIRK type signal peptide
CLPCLEEF_00088	1.2e-202	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
CLPCLEEF_00089	0.0	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
CLPCLEEF_00090	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
CLPCLEEF_00091	6.72e-261	pbpX	-	-	V	-	-	-	Beta-lactamase
CLPCLEEF_00092	1.05e-289	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
CLPCLEEF_00093	4.19e-92	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
CLPCLEEF_00095	3.11e-13	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CLPCLEEF_00096	1.38e-107	-	-	-	J	-	-	-	FR47-like protein
CLPCLEEF_00097	3.37e-50	-	-	-	S	-	-	-	Cytochrome B5
CLPCLEEF_00098	3.92e-215	arbZ	-	-	I	-	-	-	Phosphate acyltransferases
CLPCLEEF_00099	5.48e-235	-	-	-	M	-	-	-	Glycosyl transferase family 8
CLPCLEEF_00100	1.91e-236	-	-	-	M	-	-	-	Glycosyl transferase family 8
CLPCLEEF_00101	7.23e-201	arbx	-	-	M	-	-	-	Glycosyl transferase family 8
CLPCLEEF_00102	4.19e-192	-	-	-	I	-	-	-	Acyl-transferase
CLPCLEEF_00104	1.09e-46	-	-	-	-	-	-	-	-
CLPCLEEF_00106	3.98e-169	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
CLPCLEEF_00107	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
CLPCLEEF_00108	0.0	yycH	-	-	S	-	-	-	YycH protein
CLPCLEEF_00109	7.44e-192	yycI	-	-	S	-	-	-	YycH protein
CLPCLEEF_00110	1.19e-188	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
CLPCLEEF_00111	3.17e-224	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
CLPCLEEF_00112	8.64e-107	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CLPCLEEF_00113	1.93e-32	-	-	-	G	-	-	-	Peptidase_C39 like family
CLPCLEEF_00114	2.16e-207	-	-	-	M	-	-	-	NlpC/P60 family
CLPCLEEF_00115	6.67e-115	-	-	-	G	-	-	-	Peptidase_C39 like family
CLPCLEEF_00116	1.09e-223	pepI	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
CLPCLEEF_00117	4.82e-114	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
CLPCLEEF_00118	0.0	-	-	-	S	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CLPCLEEF_00119	1.05e-222	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
CLPCLEEF_00120	1.16e-207	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
CLPCLEEF_00121	1.43e-125	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
CLPCLEEF_00122	7.23e-244	ysdE	-	-	P	-	-	-	Citrate transporter
CLPCLEEF_00123	3.34e-92	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
CLPCLEEF_00124	0.0	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
CLPCLEEF_00125	9.69e-25	-	-	-	-	-	-	-	-
CLPCLEEF_00126	1.34e-09	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
CLPCLEEF_00127	4.75e-239	-	-	-	M	-	-	-	Glycosyl transferase
CLPCLEEF_00128	3.67e-225	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
CLPCLEEF_00129	1.11e-154	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
CLPCLEEF_00130	2.42e-204	-	-	-	L	-	-	-	HNH nucleases
CLPCLEEF_00131	1.4e-191	yhaH	-	-	S	-	-	-	Protein of unknown function (DUF805)
CLPCLEEF_00132	2.89e-173	glnQ	-	-	E	ko:K17076	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CLPCLEEF_00133	0.0	XK27_05795	-	-	P	ko:K17073,ko:K17074	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CLPCLEEF_00134	1.41e-155	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
CLPCLEEF_00135	7.63e-85	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
CLPCLEEF_00136	1.14e-164	terC	-	-	P	-	-	-	Integral membrane protein TerC family
CLPCLEEF_00137	1.25e-119	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	6-O-methylguanine DNA methyltransferase, DNA binding domain
CLPCLEEF_00138	1.24e-169	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
CLPCLEEF_00139	2.29e-112	-	-	-	-	-	-	-	-
CLPCLEEF_00140	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CLPCLEEF_00141	1.45e-231	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
CLPCLEEF_00142	5.07e-190	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CLPCLEEF_00143	9.18e-187	-	-	-	S	-	-	-	Protein of unknown function (DUF1002)
CLPCLEEF_00144	2.62e-199	epsV	-	-	S	-	-	-	glycosyl transferase family 2
CLPCLEEF_00145	5.29e-164	-	-	-	S	-	-	-	Alpha/beta hydrolase family
CLPCLEEF_00146	2.32e-47	-	-	-	-	-	-	-	-
CLPCLEEF_00147	1.76e-233	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CLPCLEEF_00148	8.37e-161	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CLPCLEEF_00149	1.11e-177	-	-	-	-	-	-	-	-
CLPCLEEF_00150	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
CLPCLEEF_00151	1.01e-170	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CLPCLEEF_00152	7.36e-291	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
CLPCLEEF_00153	2.43e-263	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
CLPCLEEF_00154	2.45e-164	-	-	-	-	-	-	-	-
CLPCLEEF_00155	6.89e-258	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
CLPCLEEF_00156	2.23e-166	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
CLPCLEEF_00157	4.67e-200	-	-	-	I	-	-	-	alpha/beta hydrolase fold
CLPCLEEF_00158	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 31 family
CLPCLEEF_00159	3.75e-278	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CLPCLEEF_00161	1.14e-115	ntd	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside
CLPCLEEF_00162	7.6e-113	-	2.7.1.200, 2.7.1.204	-	G	ko:K02773,ko:K20112	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CLPCLEEF_00163	3.56e-191	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
CLPCLEEF_00164	2.65e-108	usp5	-	-	T	-	-	-	universal stress protein
CLPCLEEF_00166	1.78e-212	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphonate ABC transporter
CLPCLEEF_00167	6.34e-180	phnC	3.6.3.28	-	P	ko:K02041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
CLPCLEEF_00168	1.91e-168	phnB	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CLPCLEEF_00169	1.29e-190	-	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CLPCLEEF_00170	7.05e-103	-	-	-	L	-	-	-	COG3385 FOG Transposase and inactivated derivatives
CLPCLEEF_00171	1.87e-220	-	-	-	L	-	-	-	COG3385 FOG Transposase and inactivated derivatives
CLPCLEEF_00172	5.61e-138	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
CLPCLEEF_00173	5.18e-109	-	-	-	-	-	-	-	-
CLPCLEEF_00174	0.0	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
CLPCLEEF_00175	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
CLPCLEEF_00176	0.0	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
CLPCLEEF_00177	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Ribonucleoside-triphosphate reductase
CLPCLEEF_00178	1.35e-180	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CLPCLEEF_00179	1.69e-132	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
CLPCLEEF_00180	2.19e-292	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
CLPCLEEF_00181	5.67e-278	yqjV	-	-	EGP	-	-	-	Major Facilitator Superfamily
CLPCLEEF_00182	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
CLPCLEEF_00183	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
CLPCLEEF_00184	6.55e-97	-	-	-	-	-	-	-	-
CLPCLEEF_00185	3.75e-48	-	-	-	S	-	-	-	PFAM Archaeal ATPase
CLPCLEEF_00187	4.53e-76	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
CLPCLEEF_00188	3.61e-60	-	-	-	-	-	-	-	-
CLPCLEEF_00189	8.28e-28	-	-	-	-	-	-	-	-
CLPCLEEF_00190	1.21e-40	-	-	-	-	-	-	-	-
CLPCLEEF_00191	1.05e-54	-	-	-	S	-	-	-	Protein of unknown function (DUF2922)
CLPCLEEF_00192	4.18e-140	-	-	-	S	-	-	-	SLAP domain
CLPCLEEF_00193	6.87e-27	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CLPCLEEF_00195	2.02e-75	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CLPCLEEF_00196	4.25e-98	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CLPCLEEF_00198	8.49e-100	-	-	-	K	-	-	-	DNA-templated transcription, initiation
CLPCLEEF_00199	2.85e-54	-	-	-	-	-	-	-	-
CLPCLEEF_00201	1.3e-162	-	-	-	S	-	-	-	SLAP domain
CLPCLEEF_00203	1.47e-286	-	-	-	NU	-	-	-	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
CLPCLEEF_00204	8.93e-233	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
CLPCLEEF_00205	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
CLPCLEEF_00206	2.47e-138	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
CLPCLEEF_00207	1.68e-207	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
CLPCLEEF_00208	1.98e-168	-	-	-	-	-	-	-	-
CLPCLEEF_00209	1.72e-149	-	-	-	-	-	-	-	-
CLPCLEEF_00210	4.51e-171	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CLPCLEEF_00211	5.18e-128	-	-	-	G	-	-	-	Aldose 1-epimerase
CLPCLEEF_00212	2.92e-258	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
CLPCLEEF_00213	1.03e-145	plsY1	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
CLPCLEEF_00214	0.0	XK27_08315	-	-	M	-	-	-	Sulfatase
CLPCLEEF_00215	0.0	-	-	-	S	-	-	-	Fibronectin type III domain
CLPCLEEF_00216	7.03e-307	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CLPCLEEF_00217	9.39e-71	-	-	-	-	-	-	-	-
CLPCLEEF_00219	0.0	pepC2	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
CLPCLEEF_00220	1.77e-157	ypgQ	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLPCLEEF_00221	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CLPCLEEF_00222	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CLPCLEEF_00223	2.64e-266	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
CLPCLEEF_00224	1.34e-191	oppB	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLPCLEEF_00225	6.71e-241	oppC	-	-	EP	ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLPCLEEF_00226	6.08e-253	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CLPCLEEF_00227	6.54e-222	oppF	-	-	P	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CLPCLEEF_00228	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
CLPCLEEF_00229	8.35e-94	hsp	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
CLPCLEEF_00230	2.02e-38	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
CLPCLEEF_00231	1.67e-143	-	-	-	-	-	-	-	-
CLPCLEEF_00233	1.66e-143	-	-	-	E	-	-	-	Belongs to the SOS response-associated peptidase family
CLPCLEEF_00234	4.07e-245	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
CLPCLEEF_00235	4.29e-116	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	MafB19-like deaminase
CLPCLEEF_00236	4.57e-135	-	-	-	S	ko:K06872	-	ko00000	TPM domain
CLPCLEEF_00237	1.71e-173	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
CLPCLEEF_00238	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
CLPCLEEF_00239	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CLPCLEEF_00240	2.72e-189	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
CLPCLEEF_00241	5.17e-129	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
CLPCLEEF_00242	2.56e-193	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
CLPCLEEF_00243	9.99e-53	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
CLPCLEEF_00244	2.91e-190	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
CLPCLEEF_00245	3.12e-308	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CLPCLEEF_00246	5.52e-113	-	-	-	-	-	-	-	-
CLPCLEEF_00247	0.0	-	-	-	S	-	-	-	SLAP domain
CLPCLEEF_00248	5.4e-226	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CLPCLEEF_00249	1.37e-219	-	-	-	GK	-	-	-	ROK family
CLPCLEEF_00250	2.53e-56	-	-	-	-	-	-	-	-
CLPCLEEF_00251	0.0	-	-	-	S	ko:K06885	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLPCLEEF_00252	1.75e-89	-	-	-	S	-	-	-	Domain of unknown function (DUF1934)
CLPCLEEF_00253	1.18e-88	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
CLPCLEEF_00254	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
CLPCLEEF_00255	1.89e-312	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CLPCLEEF_00256	7.28e-97	-	-	-	K	-	-	-	acetyltransferase
CLPCLEEF_00257	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CLPCLEEF_00258	2.07e-196	msmR	-	-	K	-	-	-	AraC-like ligand binding domain
CLPCLEEF_00259	1.44e-294	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
CLPCLEEF_00260	7.92e-135	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
CLPCLEEF_00261	4.63e-38	-	-	-	K	-	-	-	Helix-turn-helix
CLPCLEEF_00262	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
CLPCLEEF_00263	1.66e-121	-	2.1.1.72	-	L	ko:K07316	-	ko00000,ko01000,ko02048	DNA methylase
CLPCLEEF_00265	5.45e-72	-	-	-	-	-	-	-	-
CLPCLEEF_00266	5.22e-18	-	-	-	S	-	-	-	Domain of unknown function (DUF3173)
CLPCLEEF_00267	6.03e-215	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CLPCLEEF_00268	4e-79	-	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
CLPCLEEF_00270	7.68e-129	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
CLPCLEEF_00271	3.64e-309	-	-	-	M	-	-	-	Rib/alpha-like repeat
CLPCLEEF_00273	3.31e-65	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
CLPCLEEF_00275	2.86e-169	-	-	-	L	-	-	-	Transposase and inactivated derivatives
CLPCLEEF_00276	3.74e-125	-	-	-	-	-	-	-	-
CLPCLEEF_00277	3.94e-183	-	-	-	P	-	-	-	Voltage gated chloride channel
CLPCLEEF_00278	2.83e-237	-	-	-	C	-	-	-	FMN-dependent dehydrogenase
CLPCLEEF_00279	1.05e-69	-	-	-	-	-	-	-	-
CLPCLEEF_00280	7.17e-56	-	-	-	-	-	-	-	-
CLPCLEEF_00281	5.43e-295	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CLPCLEEF_00282	0.0	-	-	-	E	-	-	-	amino acid
CLPCLEEF_00283	1.64e-200	yhaX	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
CLPCLEEF_00284	0.0	dexB	3.2.1.70	-	G	ko:K01215	-	ko00000,ko01000	Alpha amylase, catalytic domain protein
CLPCLEEF_00285	1.07e-52	rpmE	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
CLPCLEEF_00286	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
CLPCLEEF_00287	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
CLPCLEEF_00288	3.83e-79	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
CLPCLEEF_00289	2.68e-275	alr	5.1.1.1, 5.1.1.5	-	E	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CLPCLEEF_00290	1.23e-166	-	-	-	S	-	-	-	(CBS) domain
CLPCLEEF_00291	2.93e-234	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
CLPCLEEF_00292	1.89e-134	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
CLPCLEEF_00293	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CLPCLEEF_00294	7.32e-46	yabO	-	-	J	-	-	-	S4 domain protein
CLPCLEEF_00295	7.52e-78	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
CLPCLEEF_00296	1.61e-81	-	-	-	J	ko:K07571	-	ko00000	S1 RNA binding domain
CLPCLEEF_00297	2.75e-307	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
CLPCLEEF_00298	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CLPCLEEF_00299	3.91e-214	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CLPCLEEF_00300	2.77e-248	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CLPCLEEF_00301	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
CLPCLEEF_00302	2.84e-108	-	-	-	K	-	-	-	FR47-like protein
CLPCLEEF_00307	4.19e-92	ytsP	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
CLPCLEEF_00308	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
CLPCLEEF_00309	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CLPCLEEF_00310	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CLPCLEEF_00311	7.71e-157	comC	3.4.23.43	-	NOU	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	Bacterial Peptidase A24 N-terminal domain
CLPCLEEF_00312	1.47e-91	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CLPCLEEF_00313	1.39e-106	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
CLPCLEEF_00314	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CLPCLEEF_00315	6.34e-66	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
CLPCLEEF_00316	6.64e-146	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CLPCLEEF_00317	4.68e-138	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
CLPCLEEF_00318	1.14e-63	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
CLPCLEEF_00319	3.3e-197	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CLPCLEEF_00320	1.14e-62	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CLPCLEEF_00321	9.07e-73	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CLPCLEEF_00322	8.7e-157	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CLPCLEEF_00323	1.66e-100	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CLPCLEEF_00324	1.45e-34	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
CLPCLEEF_00325	1.56e-55	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CLPCLEEF_00326	3.62e-79	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CLPCLEEF_00327	3.03e-44	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CLPCLEEF_00328	1.23e-123	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CLPCLEEF_00329	1e-39	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CLPCLEEF_00330	7.94e-90	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CLPCLEEF_00331	7.18e-121	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CLPCLEEF_00332	4.84e-73	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CLPCLEEF_00333	3.73e-110	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CLPCLEEF_00334	2.22e-34	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
CLPCLEEF_00335	2.86e-92	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
CLPCLEEF_00336	3.59e-301	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
CLPCLEEF_00337	3.7e-155	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
CLPCLEEF_00338	3.13e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CLPCLEEF_00339	1.89e-21	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
CLPCLEEF_00340	2.07e-73	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CLPCLEEF_00341	3.82e-82	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CLPCLEEF_00342	3.62e-218	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CLPCLEEF_00343	2.23e-80	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
CLPCLEEF_00344	5.91e-198	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CLPCLEEF_00345	1.58e-201	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CLPCLEEF_00346	1.53e-175	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CLPCLEEF_00347	5.69e-190	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
CLPCLEEF_00348	3.22e-103	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CLPCLEEF_00349	3.94e-85	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
CLPCLEEF_00350	1.44e-234	-	-	-	L	-	-	-	Phage integrase family
CLPCLEEF_00351	4.57e-135	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
CLPCLEEF_00352	1.56e-152	-	3.8.1.2	-	S	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
CLPCLEEF_00353	2.02e-169	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
CLPCLEEF_00354	3.16e-160	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
CLPCLEEF_00355	8.43e-206	-	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
CLPCLEEF_00356	2.42e-33	-	-	-	-	-	-	-	-
CLPCLEEF_00357	9.82e-164	gpmA1	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CLPCLEEF_00358	2.32e-234	-	-	-	S	-	-	-	AAA domain
CLPCLEEF_00359	8.69e-66	-	-	-	-	-	-	-	-
CLPCLEEF_00360	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
CLPCLEEF_00361	1.11e-69	-	-	-	-	-	-	-	-
CLPCLEEF_00362	5.22e-131	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
CLPCLEEF_00363	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CLPCLEEF_00364	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CLPCLEEF_00365	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
CLPCLEEF_00366	2.45e-98	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
CLPCLEEF_00367	2.69e-178	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CLPCLEEF_00368	1.55e-122	comX	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	Belongs to the sigma-70 factor family
CLPCLEEF_00369	1.19e-45	-	-	-	-	-	-	-	-
CLPCLEEF_00370	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
CLPCLEEF_00371	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CLPCLEEF_00372	3.73e-33	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
CLPCLEEF_00373	5e-130	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
CLPCLEEF_00374	2.69e-90	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CLPCLEEF_00375	1.05e-160	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
CLPCLEEF_00376	5.48e-201	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
CLPCLEEF_00377	1.13e-210	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
CLPCLEEF_00378	2.48e-196	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
CLPCLEEF_00379	5.24e-187	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CLPCLEEF_00380	3.83e-178	pstB1	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CLPCLEEF_00381	2.89e-151	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
CLPCLEEF_00383	3.72e-111	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CLPCLEEF_00384	1.61e-72	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
CLPCLEEF_00385	9.32e-189	-	2.1.1.172	-	J	ko:K00564,ko:K10716	-	ko00000,ko01000,ko02000,ko03009	Ion channel
CLPCLEEF_00386	5.31e-149	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
CLPCLEEF_00387	6.15e-36	-	-	-	-	-	-	-	-
CLPCLEEF_00388	1.08e-117	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
CLPCLEEF_00389	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CLPCLEEF_00390	1.12e-136	-	-	-	M	-	-	-	family 8
CLPCLEEF_00391	1.15e-47	-	-	-	M	-	-	-	lipopolysaccharide 3-alpha-galactosyltransferase activity
CLPCLEEF_00392	6.31e-68	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CLPCLEEF_00393	9.21e-142	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CLPCLEEF_00394	1.18e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2508)
CLPCLEEF_00395	1.15e-146	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CLPCLEEF_00396	1.58e-70	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
CLPCLEEF_00397	8.4e-199	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
CLPCLEEF_00398	1.4e-80	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
CLPCLEEF_00399	3.05e-200	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CLPCLEEF_00400	4.27e-167	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
CLPCLEEF_00401	8.72e-111	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
CLPCLEEF_00402	3.69e-171	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
CLPCLEEF_00403	3.93e-125	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
CLPCLEEF_00404	3.35e-248	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CLPCLEEF_00405	1.28e-311	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
CLPCLEEF_00406	5.51e-46	-	-	-	S	-	-	-	Transposase C of IS166 homeodomain
CLPCLEEF_00407	4.01e-84	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
CLPCLEEF_00408	9.48e-31	-	-	-	-	-	-	-	-
CLPCLEEF_00409	3.06e-53	bbsF_1	2.8.3.19	-	C	ko:K18702	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
CLPCLEEF_00410	6.43e-230	frc	2.8.3.16	-	C	ko:K07749	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
CLPCLEEF_00411	0.0	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
CLPCLEEF_00412	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
CLPCLEEF_00413	8.74e-146	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
CLPCLEEF_00414	4.65e-219	-	-	-	L	-	-	-	Bifunctional protein
CLPCLEEF_00415	6.68e-225	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
CLPCLEEF_00416	2.14e-234	scrR	-	-	K	ko:K03484	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
CLPCLEEF_00417	0.0	scrB	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
CLPCLEEF_00418	0.0	scrA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CLPCLEEF_00419	2.14e-231	-	-	-	M	-	-	-	CHAP domain
CLPCLEEF_00420	2.79e-102	-	-	-	-	-	-	-	-
CLPCLEEF_00421	1.06e-58	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CLPCLEEF_00422	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
CLPCLEEF_00423	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CLPCLEEF_00424	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CLPCLEEF_00425	3.89e-132	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
CLPCLEEF_00426	1.39e-237	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
CLPCLEEF_00427	7.58e-69	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
CLPCLEEF_00428	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CLPCLEEF_00429	6.15e-268	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CLPCLEEF_00430	3.16e-231	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
CLPCLEEF_00431	1.26e-303	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
CLPCLEEF_00432	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CLPCLEEF_00433	5.32e-57	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
CLPCLEEF_00434	9.37e-96	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CLPCLEEF_00435	1.18e-66	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
CLPCLEEF_00436	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
CLPCLEEF_00437	5.37e-72	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
CLPCLEEF_00438	2.34e-76	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
CLPCLEEF_00439	5.62e-95	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
CLPCLEEF_00440	4.13e-186	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
CLPCLEEF_00441	8.12e-144	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CLPCLEEF_00442	1.55e-29	-	-	-	-	-	-	-	-
CLPCLEEF_00443	5.53e-147	-	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
CLPCLEEF_00444	4.31e-175	-	-	-	-	-	-	-	-
CLPCLEEF_00445	4.52e-126	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
CLPCLEEF_00446	4.28e-187	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
CLPCLEEF_00447	2.96e-23	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
CLPCLEEF_00448	3.09e-71	-	-	-	-	-	-	-	-
CLPCLEEF_00449	1.6e-272	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
CLPCLEEF_00450	1.23e-231	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
CLPCLEEF_00451	0.0	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
CLPCLEEF_00452	9.89e-74	-	-	-	-	-	-	-	-
CLPCLEEF_00453	0.0	sasH	3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45	-	F	ko:K01081,ko:K01119,ko:K07004,ko:K08693,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
CLPCLEEF_00454	4.25e-119	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
CLPCLEEF_00455	6.38e-184	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
CLPCLEEF_00456	2.15e-137	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
CLPCLEEF_00457	6.9e-150	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
CLPCLEEF_00458	1.76e-234	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
CLPCLEEF_00475	3.97e-91	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CLPCLEEF_00477	1.6e-16	-	-	-	-	-	-	-	-
CLPCLEEF_00479	3.07e-23	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CLPCLEEF_00481	4.43e-135	-	-	-	K	ko:K07741	-	ko00000	BRO family, N-terminal domain
CLPCLEEF_00487	5.11e-69	-	-	-	S	-	-	-	Protein of unknown function (DUF1071)
CLPCLEEF_00488	1.1e-41	-	-	-	S	-	-	-	Conserved phage C-terminus (Phg_2220_C)
CLPCLEEF_00489	5.44e-10	dnaC	-	-	L	ko:K02315	-	ko00000,ko03032	Bacterial dnaA protein
CLPCLEEF_00499	2.44e-32	-	-	-	S	-	-	-	ASCH domain
CLPCLEEF_00500	6.09e-130	-	1.8.4.10, 1.8.4.8	-	EH	ko:K00390	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko00002,ko01000	sulfate reduction
CLPCLEEF_00502	1.06e-40	-	-	-	-	-	-	-	-
CLPCLEEF_00503	9.09e-143	-	-	-	K	-	-	-	Belongs to the N(4) N(6)-methyltransferase family
CLPCLEEF_00504	1.26e-108	-	-	-	L	-	-	-	transposase activity
CLPCLEEF_00505	4.3e-272	-	-	-	S	ko:K06909	-	ko00000	Terminase RNAseH like domain
CLPCLEEF_00506	4.77e-269	-	-	-	S	-	-	-	Phage portal protein, SPP1 Gp6-like
CLPCLEEF_00507	1.08e-213	-	-	-	S	-	-	-	Phage minor capsid protein 2
CLPCLEEF_00509	1.89e-53	-	-	-	S	-	-	-	Phage minor structural protein GP20
CLPCLEEF_00510	6.19e-195	gpG	-	-	-	-	-	-	-
CLPCLEEF_00511	7.75e-57	-	-	-	-	-	-	-	-
CLPCLEEF_00512	2.27e-52	-	-	-	S	-	-	-	Minor capsid protein
CLPCLEEF_00513	1.92e-41	-	-	-	S	-	-	-	Minor capsid protein
CLPCLEEF_00514	1.67e-67	-	-	-	S	-	-	-	Minor capsid protein from bacteriophage
CLPCLEEF_00515	1.61e-105	-	-	-	N	-	-	-	domain, Protein
CLPCLEEF_00516	2.11e-45	-	-	-	-	-	-	-	-
CLPCLEEF_00517	4.82e-110	-	-	-	S	-	-	-	Bacteriophage Gp15 protein
CLPCLEEF_00518	0.0	-	-	-	D	-	-	-	domain protein
CLPCLEEF_00519	7.46e-139	-	-	-	S	-	-	-	phage tail
CLPCLEEF_00520	0.0	-	-	-	S	-	-	-	Phage minor structural protein
CLPCLEEF_00530	1.8e-49	-	-	-	S	-	-	-	Bacteriophage holin of superfamily 6 (Holin_LLH)
CLPCLEEF_00531	7.31e-130	-	-	-	M	-	-	-	hydrolase, family 25
CLPCLEEF_00534	5.1e-09	-	-	-	-	-	-	-	-
CLPCLEEF_00547	1.72e-286	-	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyl transferase 4-like domain
CLPCLEEF_00548	3.68e-256	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
CLPCLEEF_00549	5.35e-224	mprF	-	-	S	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CLPCLEEF_00550	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
CLPCLEEF_00551	1.3e-40	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
CLPCLEEF_00552	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
CLPCLEEF_00553	1.58e-101	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
CLPCLEEF_00556	5.31e-211	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
CLPCLEEF_00559	7.29e-287	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CLPCLEEF_00560	0.0	mdr	-	-	EGP	-	-	-	Major Facilitator
CLPCLEEF_00562	1.92e-102	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
CLPCLEEF_00563	3.39e-154	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
CLPCLEEF_00564	1.32e-151	-	-	-	S	-	-	-	Putative esterase
CLPCLEEF_00565	1.81e-270	-	2.7.1.211	-	G	ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CLPCLEEF_00566	7.66e-248	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
CLPCLEEF_00567	3.75e-168	-	-	-	K	-	-	-	rpiR family
CLPCLEEF_00568	0.0	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
CLPCLEEF_00569	9.83e-236	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome d ubiquinol oxidase subunit II
CLPCLEEF_00570	0.0	cydC	-	-	CO	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
CLPCLEEF_00571	0.0	cydD	-	-	CO	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CLPCLEEF_00572	1.76e-165	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
CLPCLEEF_00573	8.31e-228	hepT	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
CLPCLEEF_00574	1.03e-206	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
CLPCLEEF_00575	3.01e-294	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
CLPCLEEF_00576	1.41e-51	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
CLPCLEEF_00577	9.32e-109	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CLPCLEEF_00578	6.75e-216	-	-	-	K	-	-	-	LysR substrate binding domain
CLPCLEEF_00579	1.39e-156	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
CLPCLEEF_00580	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
CLPCLEEF_00581	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
CLPCLEEF_00582	1.27e-255	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CLPCLEEF_00583	4.84e-42	-	-	-	-	-	-	-	-
CLPCLEEF_00584	9.14e-187	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
CLPCLEEF_00585	8.73e-205	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
CLPCLEEF_00586	8.63e-195	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
CLPCLEEF_00587	4.66e-179	pstB	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CLPCLEEF_00588	6.07e-138	-	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
CLPCLEEF_00589	2.69e-156	phoB	-	-	T	ko:K07658	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C terminal
CLPCLEEF_00590	0.0	phoR	2.7.13.3	-	T	ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
CLPCLEEF_00591	3.54e-300	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
CLPCLEEF_00592	1.59e-61	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain
CLPCLEEF_00594	9.64e-307	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
CLPCLEEF_00595	2.23e-197	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CLPCLEEF_00596	5.6e-129	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
CLPCLEEF_00597	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
CLPCLEEF_00598	6.03e-218	fba	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-1,6-bisphosphate aldolase, class II
CLPCLEEF_00599	8.08e-108	-	-	-	S	-	-	-	PFAM Archaeal ATPase
CLPCLEEF_00600	1.32e-105	-	-	-	S	-	-	-	PFAM Archaeal ATPase
CLPCLEEF_00601	7.02e-36	-	-	-	-	-	-	-	-
CLPCLEEF_00602	1.43e-98	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	UbiA prenyltransferase family
CLPCLEEF_00603	1.86e-91	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
CLPCLEEF_00604	1.28e-226	-	-	-	S	-	-	-	PFAM Archaeal ATPase
CLPCLEEF_00605	4.77e-248	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
CLPCLEEF_00606	4.95e-164	citG	2.4.2.52	-	H	ko:K05966	ko02020,map02020	ko00000,ko00001,ko01000	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
CLPCLEEF_00607	2.74e-06	-	-	-	S	-	-	-	PFAM Archaeal ATPase
CLPCLEEF_00608	5.46e-182	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
CLPCLEEF_00609	7.62e-134	-	-	-	G	-	-	-	Phosphoglycerate mutase family
CLPCLEEF_00610	0.0	pps	2.7.9.2	-	H	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
CLPCLEEF_00611	1.21e-207	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
CLPCLEEF_00612	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
CLPCLEEF_00613	8.43e-73	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
CLPCLEEF_00614	4.24e-289	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
CLPCLEEF_00615	0.0	yhaN	-	-	L	-	-	-	AAA domain
CLPCLEEF_00616	4.53e-239	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
CLPCLEEF_00618	9.67e-33	-	-	-	S	-	-	-	Domain of unknown function DUF1829
CLPCLEEF_00619	0.0	-	-	-	-	-	-	-	-
CLPCLEEF_00620	5.74e-96	eda	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	KDPG and KHG aldolase
CLPCLEEF_00621	3.12e-196	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
CLPCLEEF_00622	1.2e-41	-	-	-	-	-	-	-	-
CLPCLEEF_00623	1.61e-101	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
CLPCLEEF_00624	3.67e-174	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CLPCLEEF_00625	1.63e-281	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
CLPCLEEF_00626	2.16e-163	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
CLPCLEEF_00628	1.35e-71	ytpP	-	-	CO	-	-	-	Thioredoxin
CLPCLEEF_00629	8.78e-157	XK27_10290	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
CLPCLEEF_00630	2.59e-313	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
CLPCLEEF_00631	4.65e-278	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
CLPCLEEF_00632	2.04e-226	-	-	-	S	-	-	-	SLAP domain
CLPCLEEF_00633	0.0	-	-	-	M	-	-	-	Peptidase family M1 domain
CLPCLEEF_00634	2e-238	-	-	-	S	-	-	-	Bacteriocin helveticin-J
CLPCLEEF_00635	1.33e-67	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
CLPCLEEF_00636	2.53e-139	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
CLPCLEEF_00637	1.98e-35	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
CLPCLEEF_00638	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CLPCLEEF_00639	7.81e-199	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
CLPCLEEF_00640	2.16e-136	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CLPCLEEF_00641	1.29e-106	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CLPCLEEF_00642	0.0	dnaB2	-	-	L	ko:K03346	-	ko00000,ko03032	Replication initiation and membrane attachment
CLPCLEEF_00643	1.31e-215	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
CLPCLEEF_00644	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CLPCLEEF_00645	5.59e-98	-	-	-	-	-	-	-	-
CLPCLEEF_00646	4.78e-261	-	-	-	S	-	-	-	Domain of unknown function (DUF389)
CLPCLEEF_00647	1.53e-122	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CLPCLEEF_00648	6.49e-137	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CLPCLEEF_00651	8.95e-70	-	-	-	K	-	-	-	LytTr DNA-binding domain
CLPCLEEF_00652	9.29e-51	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
CLPCLEEF_00653	1.08e-217	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
CLPCLEEF_00654	2.25e-30	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	domain protein
CLPCLEEF_00655	1.1e-128	-	-	-	E	ko:K02054	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CLPCLEEF_00656	6.18e-123	rihC	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
CLPCLEEF_00657	1.07e-93	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CLPCLEEF_00658	9.64e-38	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
CLPCLEEF_00659	8.69e-76	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CLPCLEEF_00660	1.25e-192	add	3.5.4.2, 3.5.4.4	-	F	ko:K01488,ko:K02029,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CLPCLEEF_00661	3.01e-255	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
CLPCLEEF_00662	6.85e-109	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
CLPCLEEF_00663	5.03e-256	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
CLPCLEEF_00664	1.77e-157	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CLPCLEEF_00665	9.22e-141	yqeK	-	-	H	-	-	-	Hydrolase, HD family
CLPCLEEF_00666	5.09e-78	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
CLPCLEEF_00667	4.63e-275	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
CLPCLEEF_00668	2.19e-125	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
CLPCLEEF_00669	3.52e-163	csrR	-	-	K	-	-	-	response regulator
CLPCLEEF_00670	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
CLPCLEEF_00671	9.04e-162	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
CLPCLEEF_00672	5.86e-149	-	-	-	S	-	-	-	SLAP domain
CLPCLEEF_00673	4.12e-75	-	-	-	S	-	-	-	SLAP domain
CLPCLEEF_00674	2.42e-69	-	-	-	S	-	-	-	Abi-like protein
CLPCLEEF_00675	2.08e-95	-	-	-	S	ko:K19055	-	ko00000,ko01000,ko03016	Aminoacyl-tRNA editing domain
CLPCLEEF_00676	2.43e-216	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
CLPCLEEF_00677	5.58e-59	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
CLPCLEEF_00678	3.23e-172	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CLPCLEEF_00679	4.87e-81	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
CLPCLEEF_00681	1.8e-142	glnP9	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter, permease protein
CLPCLEEF_00682	4.11e-150	glnP7	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter permease
CLPCLEEF_00683	1.89e-171	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CLPCLEEF_00684	1.02e-67	cjaA	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
CLPCLEEF_00685	8.08e-117	cjaA	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
CLPCLEEF_00686	9e-132	-	-	-	L	-	-	-	Integrase
CLPCLEEF_00687	4.02e-91	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	Toxin-antitoxin system, toxin component, MazF family
CLPCLEEF_00688	5.32e-42	-	-	-	-	ko:K18829	-	ko00000,ko02048	-
CLPCLEEF_00690	4.14e-113	-	-	-	K	ko:K03484	-	ko00000,ko03000	Periplasmic binding protein domain
CLPCLEEF_00691	0.0	pulA	3.2.1.41	CBM48,GH13	G	ko:K01200	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko01000	belongs to the glycosyl hydrolase 13 family
CLPCLEEF_00692	0.0	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
CLPCLEEF_00693	3.23e-59	-	-	-	-	-	-	-	-
CLPCLEEF_00694	9.46e-159	-	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
CLPCLEEF_00695	7.73e-199	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
CLPCLEEF_00696	6.51e-69	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
CLPCLEEF_00697	5.01e-150	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
CLPCLEEF_00698	7.68e-63	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
CLPCLEEF_00699	1.43e-309	lctO	1.13.12.4	-	C	ko:K00467,ko:K10530	ko00620,map00620	ko00000,ko00001,ko01000	L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
CLPCLEEF_00700	6.98e-285	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CLPCLEEF_00701	0.0	potE	-	-	E	-	-	-	Amino Acid
CLPCLEEF_00702	2.65e-107	-	-	-	S	-	-	-	Fic/DOC family
CLPCLEEF_00703	0.0	-	-	-	-	-	-	-	-
CLPCLEEF_00704	5.87e-110	-	-	-	-	-	-	-	-
CLPCLEEF_00705	1.92e-113	yhaH	-	-	S	-	-	-	Protein of unknown function (DUF805)
CLPCLEEF_00706	2.65e-89	-	-	-	O	-	-	-	OsmC-like protein
CLPCLEEF_00707	1.36e-266	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
CLPCLEEF_00708	3e-290	sptS	-	-	T	-	-	-	Histidine kinase
CLPCLEEF_00709	4e-31	dltr	-	-	K	-	-	-	response regulator
CLPCLEEF_00710	6.89e-93	-	-	-	K	ko:K03484	-	ko00000,ko03000	Periplasmic binding protein domain
CLPCLEEF_00711	2.14e-48	-	-	-	-	-	-	-	-
CLPCLEEF_00712	1.6e-251	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
CLPCLEEF_00713	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
CLPCLEEF_00714	4.16e-280	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
CLPCLEEF_00715	0.0	lacZ	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	-beta-galactosidase
CLPCLEEF_00716	0.0	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
CLPCLEEF_00717	1.48e-210	lacR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
CLPCLEEF_00718	0.0	lacL	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
CLPCLEEF_00719	5.06e-184	lacM	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
CLPCLEEF_00720	2.84e-240	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
CLPCLEEF_00721	2.44e-210	-	-	-	S	-	-	-	Nucleotidyl transferase AbiEii toxin, Type IV TA system
CLPCLEEF_00722	5.55e-137	-	-	-	K	-	-	-	Transcriptional regulator, AbiEi antitoxin
CLPCLEEF_00723	4.05e-242	-	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding protein-like domain
CLPCLEEF_00724	6.78e-47	-	-	-	-	-	-	-	-
CLPCLEEF_00728	5.99e-205	-	-	-	-	-	-	-	-
CLPCLEEF_00729	2.37e-219	-	-	-	-	-	-	-	-
CLPCLEEF_00730	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
CLPCLEEF_00731	2.05e-286	ynbB	-	-	P	-	-	-	aluminum resistance
CLPCLEEF_00732	3.84e-216	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CLPCLEEF_00733	4.95e-89	yqhL	-	-	P	-	-	-	Rhodanese-like protein
CLPCLEEF_00734	1e-47	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
CLPCLEEF_00735	3.25e-154	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Rhomboid family
CLPCLEEF_00736	7.92e-126	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CLPCLEEF_00737	6.25e-29	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
CLPCLEEF_00738	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
CLPCLEEF_00739	0.0	-	-	-	S	-	-	-	membrane
CLPCLEEF_00740	7.04e-218	-	-	-	G	-	-	-	BadF/BadG/BcrA/BcrD ATPase family
CLPCLEEF_00741	9.43e-52	-	-	-	S	ko:K07473	-	ko00000,ko02048	RelB antitoxin
CLPCLEEF_00742	2.74e-69	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	Bacterial toxin of type II toxin-antitoxin system, YafQ
CLPCLEEF_00743	2.22e-60	hupB2	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
CLPCLEEF_00744	1.49e-178	-	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	abc transporter atp-binding protein
CLPCLEEF_00745	1.55e-201	isdF	-	-	U	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLPCLEEF_00746	2.07e-203	isdE	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
CLPCLEEF_00747	7.04e-159	-	-	-	M	ko:K14193	ko05150,map05150	ko00000,ko00001	Iron Transport-associated domain
CLPCLEEF_00749	6.09e-121	-	-	-	-	-	-	-	-
CLPCLEEF_00750	1.29e-164	-	-	-	S	-	-	-	SLAP domain
CLPCLEEF_00751	4.34e-64	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
CLPCLEEF_00752	2.04e-60	-	-	-	S	-	-	-	An automated process has identified a potential problem with this gene model
CLPCLEEF_00753	1.3e-175	-	-	-	S	-	-	-	Protein of unknown function (DUF3100)
CLPCLEEF_00754	5.84e-312	-	-	-	S	ko:K12941	-	ko00000,ko01002	Peptidase dimerisation domain
CLPCLEEF_00755	2.77e-292	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
CLPCLEEF_00756	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
CLPCLEEF_00757	1.76e-193	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
CLPCLEEF_00758	0.0	sufI	-	-	Q	-	-	-	Multicopper oxidase
CLPCLEEF_00759	1.8e-34	-	-	-	-	-	-	-	-
CLPCLEEF_00760	5.5e-203	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
CLPCLEEF_00761	8.21e-215	ldh3	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	lactate/malate dehydrogenase, alpha/beta C-terminal domain
CLPCLEEF_00762	1.72e-92	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
CLPCLEEF_00763	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
CLPCLEEF_00764	2.9e-254	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CLPCLEEF_00765	1.3e-117	ydiM	-	-	G	-	-	-	Major facilitator superfamily
CLPCLEEF_00766	3.87e-73	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CLPCLEEF_00767	1.48e-136	-	-	-	L	-	-	-	PFAM Integrase catalytic
CLPCLEEF_00768	2.28e-76	eriC	-	-	P	ko:K03281	-	ko00000	chloride
CLPCLEEF_00769	5.18e-90	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
CLPCLEEF_00770	5.93e-50	eriC	-	-	P	ko:K03281	-	ko00000	chloride
CLPCLEEF_00771	6.55e-76	eriC	-	-	P	ko:K03281	-	ko00000	chloride
CLPCLEEF_00772	1.45e-34	-	-	-	K	-	-	-	FCD
CLPCLEEF_00773	5.06e-13	-	-	-	K	-	-	-	FCD
CLPCLEEF_00774	1.34e-34	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CLPCLEEF_00775	4.37e-132	-	-	-	GM	-	-	-	NmrA-like family
CLPCLEEF_00776	5.5e-154	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CLPCLEEF_00777	1.56e-164	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
CLPCLEEF_00778	8.81e-212	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
CLPCLEEF_00779	2.9e-122	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CLPCLEEF_00780	9.05e-231	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
CLPCLEEF_00781	8.31e-313	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
CLPCLEEF_00782	4.22e-269	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
CLPCLEEF_00783	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
CLPCLEEF_00784	0.0	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
CLPCLEEF_00785	6.79e-190	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
CLPCLEEF_00786	8.74e-62	-	-	-	-	-	-	-	-
CLPCLEEF_00787	2.88e-105	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
CLPCLEEF_00788	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
CLPCLEEF_00789	1.02e-29	-	-	-	S	-	-	-	Alpha beta hydrolase
CLPCLEEF_00790	2.48e-80	-	-	-	S	-	-	-	Alpha beta hydrolase
CLPCLEEF_00791	8.51e-50	-	-	-	-	-	-	-	-
CLPCLEEF_00792	4.3e-66	-	-	-	-	-	-	-	-
CLPCLEEF_00793	1.14e-189	supH	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
CLPCLEEF_00794	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
CLPCLEEF_00795	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
CLPCLEEF_00796	1.82e-86	yusI	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	Belongs to the ArsC family
CLPCLEEF_00797	1.23e-227	lipA	-	-	I	-	-	-	Carboxylesterase family
CLPCLEEF_00799	1.16e-269	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CLPCLEEF_00800	8.21e-200	cinI	-	-	S	ko:K06889	-	ko00000	Serine hydrolase (FSH1)
CLPCLEEF_00801	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2207)
CLPCLEEF_00802	2.07e-38	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
CLPCLEEF_00804	0.0	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
CLPCLEEF_00805	5.24e-194	-	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CLPCLEEF_00806	6.82e-66	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
CLPCLEEF_00807	7.95e-64	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
CLPCLEEF_00808	2.14e-257	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
CLPCLEEF_00809	2.11e-133	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CLPCLEEF_00810	7.98e-93	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
CLPCLEEF_00811	2.78e-85	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CLPCLEEF_00812	7.19e-199	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CLPCLEEF_00813	1.97e-248	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CLPCLEEF_00814	1.53e-47	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CLPCLEEF_00815	6.44e-205	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
CLPCLEEF_00816	7.22e-197	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
CLPCLEEF_00817	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
CLPCLEEF_00818	2.19e-100	-	-	-	S	-	-	-	ASCH
CLPCLEEF_00819	5.97e-145	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
CLPCLEEF_00820	2.37e-46	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
CLPCLEEF_00821	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CLPCLEEF_00822	1.27e-219	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CLPCLEEF_00823	7.82e-311	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CLPCLEEF_00824	3.28e-179	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
CLPCLEEF_00825	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
CLPCLEEF_00826	1.71e-208	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
CLPCLEEF_00827	7.49e-154	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
CLPCLEEF_00828	1.1e-159	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
CLPCLEEF_00829	2.29e-41	-	-	-	-	-	-	-	-
CLPCLEEF_00830	8.76e-146	int3	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CLPCLEEF_00833	2.15e-09	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CLPCLEEF_00834	2.69e-25	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CLPCLEEF_00835	1.23e-101	-	-	-	S	-	-	-	Phage antirepressor protein KilAC domain
CLPCLEEF_00836	5.99e-61	-	-	-	-	-	-	-	-
CLPCLEEF_00842	8.83e-88	-	-	-	S	-	-	-	AAA domain
CLPCLEEF_00844	1.07e-182	-	-	-	L	-	-	-	Helicase C-terminal domain protein
CLPCLEEF_00845	4.62e-25	-	-	-	S	-	-	-	Protein of unknown function (DUF669)
CLPCLEEF_00846	0.0	-	-	-	S	ko:K06919	-	ko00000	Phage plasmid primase, P4
CLPCLEEF_00857	3.85e-49	-	-	-	S	-	-	-	VRR_NUC
CLPCLEEF_00862	1.34e-62	-	-	-	L	-	-	-	HNH nucleases
CLPCLEEF_00863	1.2e-71	-	-	-	L	-	-	-	Phage terminase, small subunit
CLPCLEEF_00864	6.84e-10	-	-	-	S	-	-	-	HicA toxin of bacterial toxin-antitoxin,
CLPCLEEF_00865	1.57e-61	-	-	-	S	-	-	-	HicB_like antitoxin of bacterial toxin-antitoxin system
CLPCLEEF_00866	1.82e-260	-	-	-	S	-	-	-	Phage Terminase
CLPCLEEF_00868	2.23e-169	-	-	-	S	-	-	-	Phage portal protein
CLPCLEEF_00869	4.37e-110	-	3.4.21.92	-	OU	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S14 family
CLPCLEEF_00870	5.87e-67	-	-	-	S	-	-	-	Phage capsid family
CLPCLEEF_00878	1.9e-137	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
CLPCLEEF_00880	8.49e-156	-	-	-	S	-	-	-	Phage minor structural protein
CLPCLEEF_00888	6.5e-51	-	-	-	S	-	-	-	Bacteriophage holin of superfamily 6 (Holin_LLH)
CLPCLEEF_00889	8.02e-127	-	-	-	M	-	-	-	hydrolase, family 25
CLPCLEEF_00891	1.33e-35	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
CLPCLEEF_00892	8.29e-75	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
CLPCLEEF_00893	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
CLPCLEEF_00894	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CLPCLEEF_00895	3.69e-233	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
CLPCLEEF_00896	7.32e-46	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CLPCLEEF_00897	1.21e-245	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CLPCLEEF_00898	3.27e-229	oppF	-	-	P	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CLPCLEEF_00899	7.92e-221	oppB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CLPCLEEF_00900	3.74e-182	oppC5	-	-	P	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CLPCLEEF_00901	3.35e-55	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CLPCLEEF_00902	7.81e-169	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
CLPCLEEF_00903	2.46e-302	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CLPCLEEF_00904	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CLPCLEEF_00905	2.8e-160	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
CLPCLEEF_00906	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
CLPCLEEF_00907	4.69e-226	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
CLPCLEEF_00908	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CLPCLEEF_00909	1.69e-06	-	-	-	-	-	-	-	-
CLPCLEEF_00910	2.1e-31	-	-	-	-	-	-	-	-
CLPCLEEF_00911	5.41e-172	cysA	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CLPCLEEF_00912	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
CLPCLEEF_00913	0.0	ctrA	-	-	E	ko:K03294	-	ko00000	amino acid
CLPCLEEF_00914	5.56e-72	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
CLPCLEEF_00915	1.34e-289	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CLPCLEEF_00916	6.78e-60	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
CLPCLEEF_00917	2.08e-122	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CLPCLEEF_00918	1.63e-173	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
CLPCLEEF_00919	1.64e-74	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
CLPCLEEF_00920	4.96e-270	-	-	-	S	-	-	-	SLAP domain
CLPCLEEF_00921	1.15e-154	ung2	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil-DNA glycosylase
CLPCLEEF_00922	7.18e-187	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
CLPCLEEF_00923	9.86e-146	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CLPCLEEF_00924	4.16e-51	ynzC	-	-	S	-	-	-	UPF0291 protein
CLPCLEEF_00925	1.3e-40	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
CLPCLEEF_00926	0.0	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CLPCLEEF_00927	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CLPCLEEF_00928	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
CLPCLEEF_00929	8.61e-296	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
CLPCLEEF_00930	1.65e-151	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
CLPCLEEF_00931	2.03e-251	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
CLPCLEEF_00932	2.21e-180	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
CLPCLEEF_00933	1.76e-235	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CLPCLEEF_00934	5.86e-168	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
CLPCLEEF_00935	1.22e-121	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
CLPCLEEF_00936	6.38e-178	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CLPCLEEF_00937	3.93e-181	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
CLPCLEEF_00938	6.38e-254	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
CLPCLEEF_00939	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
CLPCLEEF_00940	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CLPCLEEF_00941	3.4e-108	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
CLPCLEEF_00942	1.19e-259	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
CLPCLEEF_00943	3.75e-63	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
CLPCLEEF_00944	1.61e-64	ylxQ	-	-	J	-	-	-	ribosomal protein
CLPCLEEF_00945	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CLPCLEEF_00946	1.67e-79	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CLPCLEEF_00947	1.64e-198	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CLPCLEEF_00948	5.35e-223	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
CLPCLEEF_00949	6.02e-247	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
CLPCLEEF_00950	3.74e-109	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CLPCLEEF_00951	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
CLPCLEEF_00952	6.87e-277	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
CLPCLEEF_00953	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
CLPCLEEF_00954	1.09e-226	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CLPCLEEF_00961	7e-19	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
CLPCLEEF_00962	1.21e-16	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CLPCLEEF_00963	1.71e-102	-	-	-	S	-	-	-	DNA binding
CLPCLEEF_00968	2.18e-07	-	-	-	-	-	-	-	-
CLPCLEEF_00969	3.08e-125	-	-	-	S	-	-	-	AntA/AntB antirepressor
CLPCLEEF_00974	3.9e-08	-	-	-	K	-	-	-	DNA-binding protein
CLPCLEEF_00979	6.13e-71	-	-	-	S	-	-	-	Protein of unknown function (DUF1071)
CLPCLEEF_00980	4.5e-41	-	-	-	S	-	-	-	Conserved phage C-terminus (Phg_2220_C)
CLPCLEEF_00981	5.27e-63	-	-	-	L	ko:K02315	-	ko00000,ko03032	IstB-like ATP binding protein
CLPCLEEF_00987	5.99e-52	-	-	-	L	-	-	-	Endodeoxyribonuclease RusA
CLPCLEEF_00988	1.08e-10	-	-	-	-	-	-	-	-
CLPCLEEF_00996	8.27e-46	-	-	-	S	-	-	-	HicB_like antitoxin of bacterial toxin-antitoxin system
CLPCLEEF_00997	7.69e-16	-	-	-	N	-	-	-	HicA toxin of bacterial toxin-antitoxin,
CLPCLEEF_00998	1.27e-47	-	-	-	L	ko:K07474	-	ko00000	Terminase small subunit
CLPCLEEF_00999	9.32e-289	-	-	-	S	-	-	-	Terminase-like family
CLPCLEEF_01000	6.56e-176	-	-	-	S	ko:K09961	-	ko00000	Protein of unknown function (DUF1073)
CLPCLEEF_01001	3.22e-124	-	-	-	S	-	-	-	Phage Mu protein F like protein
CLPCLEEF_01002	1.14e-16	-	-	-	S	-	-	-	Lysin motif
CLPCLEEF_01003	2.77e-137	-	-	-	S	ko:K09960	-	ko00000	Uncharacterized protein conserved in bacteria (DUF2213)
CLPCLEEF_01004	2.06e-75	-	-	-	-	-	-	-	-
CLPCLEEF_01005	1.83e-181	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2184)
CLPCLEEF_01007	2.18e-96	-	-	-	-	-	-	-	-
CLPCLEEF_01008	1.8e-59	-	-	-	-	-	-	-	-
CLPCLEEF_01009	7.95e-69	-	-	-	-	-	-	-	-
CLPCLEEF_01010	7.86e-194	-	-	-	S	-	-	-	Protein of unknown function (DUF3383)
CLPCLEEF_01011	1.33e-73	-	-	-	-	-	-	-	-
CLPCLEEF_01014	0.0	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
CLPCLEEF_01015	1.06e-69	-	-	-	M	-	-	-	LysM domain
CLPCLEEF_01016	6.91e-61	-	-	-	-	-	-	-	-
CLPCLEEF_01017	1.11e-128	-	-	-	-	-	-	-	-
CLPCLEEF_01018	4.6e-63	-	-	-	-	-	-	-	-
CLPCLEEF_01019	1.37e-42	-	-	-	-	-	-	-	-
CLPCLEEF_01020	2.78e-156	-	-	-	S	-	-	-	Baseplate J-like protein
CLPCLEEF_01022	6.25e-42	-	-	-	-	-	-	-	-
CLPCLEEF_01025	2.87e-54	-	-	-	-	-	-	-	-
CLPCLEEF_01026	2.12e-27	-	-	-	S	-	-	-	Phage uncharacterised protein (Phage_XkdX)
CLPCLEEF_01029	6.31e-27	-	-	-	-	-	-	-	-
CLPCLEEF_01030	1.24e-38	-	-	-	-	-	-	-	-
CLPCLEEF_01031	3.74e-221	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
CLPCLEEF_01032	5.3e-32	-	-	-	-	-	-	-	-
CLPCLEEF_01033	9.71e-47	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
CLPCLEEF_01034	7e-131	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
CLPCLEEF_01035	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
CLPCLEEF_01036	1.15e-121	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CLPCLEEF_01037	6.1e-186	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CLPCLEEF_01038	2.55e-65	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CLPCLEEF_01039	4.39e-268	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
CLPCLEEF_01041	5.01e-55	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
CLPCLEEF_01042	4.97e-64	-	-	-	S	-	-	-	Metal binding domain of Ada
CLPCLEEF_01043	0.0	-	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
CLPCLEEF_01044	3.03e-177	lysR5	-	-	K	-	-	-	LysR substrate binding domain
CLPCLEEF_01045	2.4e-297	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
CLPCLEEF_01046	5.39e-84	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CLPCLEEF_01047	2.01e-135	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
CLPCLEEF_01048	1.76e-122	citX	2.7.7.61	-	HI	ko:K05964	ko02020,map02020	ko00000,ko00001,ko01000	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
CLPCLEEF_01049	1.07e-287	-	-	-	S	-	-	-	Sterol carrier protein domain
CLPCLEEF_01050	4.04e-29	-	-	-	-	-	-	-	-
CLPCLEEF_01051	6.93e-140	-	-	-	K	-	-	-	LysR substrate binding domain
CLPCLEEF_01052	1.13e-126	-	-	-	-	-	-	-	-
CLPCLEEF_01053	5.04e-154	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
CLPCLEEF_01054	5.73e-153	-	-	-	-	-	-	-	-
CLPCLEEF_01055	8.93e-108	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CLPCLEEF_01056	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
CLPCLEEF_01057	1.15e-64	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
CLPCLEEF_01058	5.51e-35	-	-	-	-	-	-	-	-
CLPCLEEF_01059	8.71e-31	-	-	-	G	-	-	-	Ribose/Galactose Isomerase
CLPCLEEF_01060	6.13e-70	-	-	-	K	-	-	-	sequence-specific DNA binding
CLPCLEEF_01061	5.97e-55	-	-	-	S	-	-	-	SnoaL-like domain
CLPCLEEF_01062	0.0	-	-	-	L	-	-	-	PLD-like domain
CLPCLEEF_01063	6.83e-133	yrgI	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Histidine phosphatase superfamily (branch 1)
CLPCLEEF_01064	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
CLPCLEEF_01065	0.0	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase
CLPCLEEF_01066	2.95e-283	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
CLPCLEEF_01067	3.06e-202	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
CLPCLEEF_01068	5.47e-151	-	-	-	-	-	-	-	-
CLPCLEEF_01069	2.83e-205	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CLPCLEEF_01071	1.22e-136	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CLPCLEEF_01072	2e-149	-	-	-	S	-	-	-	Peptidase family M23
CLPCLEEF_01073	1.16e-111	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CLPCLEEF_01074	1.47e-21	-	-	-	S	-	-	-	CRISPR-associated protein (Cas_Csn2)
CLPCLEEF_01075	6.94e-199	yqfL	2.7.11.33, 2.7.4.28	-	F	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
CLPCLEEF_01076	4.83e-30	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
CLPCLEEF_01077	1.08e-92	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
CLPCLEEF_01078	1.74e-224	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
CLPCLEEF_01079	3.58e-129	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CLPCLEEF_01080	1.37e-216	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CLPCLEEF_01081	4.11e-173	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
CLPCLEEF_01082	9.03e-229	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
CLPCLEEF_01083	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
CLPCLEEF_01084	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
CLPCLEEF_01085	9e-255	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
CLPCLEEF_01086	4.34e-166	-	-	-	S	-	-	-	Peptidase family M23
CLPCLEEF_01087	5.37e-106	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
CLPCLEEF_01088	2.8e-159	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
CLPCLEEF_01089	8.12e-196	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CLPCLEEF_01090	2.86e-307	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
CLPCLEEF_01091	1.25e-80	lexA	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator, GntR family
CLPCLEEF_01092	1.33e-161	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
CLPCLEEF_01093	1.65e-180	-	-	-	-	-	-	-	-
CLPCLEEF_01094	2.54e-176	-	-	-	-	-	-	-	-
CLPCLEEF_01095	3.85e-193	-	-	-	-	-	-	-	-
CLPCLEEF_01096	3.49e-36	-	-	-	-	-	-	-	-
CLPCLEEF_01097	1.27e-133	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
CLPCLEEF_01098	4.01e-184	-	-	-	-	-	-	-	-
CLPCLEEF_01099	4.4e-215	-	-	-	-	-	-	-	-
CLPCLEEF_01100	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
CLPCLEEF_01101	1.28e-150	-	3.1.3.102, 3.1.3.104, 3.1.3.23	-	G	ko:K07757,ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sucrose-6F-phosphate phosphohydrolase
CLPCLEEF_01102	4.87e-236	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
CLPCLEEF_01103	6.67e-261	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
CLPCLEEF_01104	5.87e-228	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
CLPCLEEF_01105	3.02e-173	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	GHMP kinases N terminal domain
CLPCLEEF_01106	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
CLPCLEEF_01107	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
CLPCLEEF_01108	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
CLPCLEEF_01109	1.66e-116	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
CLPCLEEF_01110	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
CLPCLEEF_01111	6.91e-149	dnaD	-	-	L	ko:K02086	-	ko00000	DnaD domain protein
CLPCLEEF_01112	1.92e-148	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CLPCLEEF_01113	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
CLPCLEEF_01114	8.47e-152	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
CLPCLEEF_01115	1.18e-139	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
CLPCLEEF_01116	1.85e-90	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
CLPCLEEF_01117	1.68e-277	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
CLPCLEEF_01118	6.74e-309	cpdA	-	-	S	-	-	-	Calcineurin-like phosphoesterase
CLPCLEEF_01119	9.67e-104	-	-	-	-	-	-	-	-
CLPCLEEF_01120	9.91e-150	-	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Ham1 family
CLPCLEEF_01121	3.56e-47	-	-	-	-	-	-	-	-
CLPCLEEF_01122	4.13e-83	-	-	-	-	-	-	-	-
CLPCLEEF_01125	1.51e-159	-	-	-	-	-	-	-	-
CLPCLEEF_01126	4.83e-136	pncA	-	-	Q	-	-	-	Isochorismatase family
CLPCLEEF_01127	1.24e-08	-	-	-	-	-	-	-	-
CLPCLEEF_01128	1.73e-48	-	-	-	-	-	-	-	-
CLPCLEEF_01129	0.0	snf	-	-	KL	-	-	-	domain protein
CLPCLEEF_01130	9.39e-141	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
CLPCLEEF_01131	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
CLPCLEEF_01132	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
CLPCLEEF_01133	9.08e-234	-	-	-	K	-	-	-	Transcriptional regulator
CLPCLEEF_01134	1.94e-217	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
CLPCLEEF_01135	7.23e-78	-	-	-	L	ko:K07484	-	ko00000	IS66 Orf2 like protein
CLPCLEEF_01136	8.17e-18	-	-	-	S	-	-	-	Transposase C of IS166 homeodomain
CLPCLEEF_01137	4.09e-11	-	-	-	L	ko:K07496	-	ko00000	Transposase
CLPCLEEF_01138	2.3e-36	XK27_03150	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
CLPCLEEF_01139	2.66e-157	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
CLPCLEEF_01140	3.35e-269	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CLPCLEEF_01141	4.36e-142	XK27_00160	-	-	S	-	-	-	Domain of unknown function (DUF5052)
CLPCLEEF_01142	1.5e-90	-	-	-	-	-	-	-	-
CLPCLEEF_01143	1.24e-258	xerS	-	-	L	ko:K03733	-	ko00000,ko03036	Belongs to the 'phage' integrase family
CLPCLEEF_01144	0.0	mutS1	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
CLPCLEEF_01145	1.15e-204	-	-	-	S	-	-	-	EDD domain protein, DegV family
CLPCLEEF_01146	2.06e-88	-	-	-	-	-	-	-	-
CLPCLEEF_01147	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
CLPCLEEF_01148	0.0	carB1	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
CLPCLEEF_01149	4.13e-255	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
CLPCLEEF_01150	3.24e-221	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
CLPCLEEF_01151	3.16e-102	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CLPCLEEF_01152	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
CLPCLEEF_01153	1.61e-70	-	-	-	-	-	-	-	-
CLPCLEEF_01155	8.81e-40	-	-	-	M	-	-	-	Mycoplasma protein of unknown function, DUF285
CLPCLEEF_01156	2.31e-144	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
CLPCLEEF_01157	3.39e-88	-	-	-	S	ko:K06915	-	ko00000	cog cog0433
CLPCLEEF_01159	4.81e-77	-	-	-	S	-	-	-	SIR2-like domain
CLPCLEEF_01160	2.64e-49	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	HsdM N-terminal domain
CLPCLEEF_01161	2.57e-61	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
CLPCLEEF_01162	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
CLPCLEEF_01163	5.22e-54	-	-	-	S	-	-	-	RloB-like protein
CLPCLEEF_01164	1.35e-208	-	-	-	S	ko:K06926	-	ko00000	AAA domain, putative AbiEii toxin, Type IV TA system
CLPCLEEF_01165	0.0	hsdR	3.1.21.3	-	L	ko:K01153	-	ko00000,ko01000,ko02048	DEAD/DEAH box helicase
CLPCLEEF_01166	0.0	-	-	-	S	-	-	-	SLAP domain
CLPCLEEF_01168	5.93e-302	XK27_01810	-	-	S	-	-	-	Calcineurin-like phosphoesterase
CLPCLEEF_01169	1.43e-80	-	-	-	S	ko:K07006	-	ko00000	Pyridoxamine 5'-phosphate oxidase
CLPCLEEF_01170	1.65e-303	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
CLPCLEEF_01172	0.0	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
CLPCLEEF_01173	4.21e-129	treR	-	-	K	ko:K03486	-	ko00000,ko03000	UTRA
CLPCLEEF_01174	2.02e-137	treB	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CLPCLEEF_01175	9.63e-204	treB	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CLPCLEEF_01176	2.76e-86	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
CLPCLEEF_01177	6.84e-243	-	-	-	L	ko:K07478	-	ko00000	AAA C-terminal domain
CLPCLEEF_01178	0.0	yqjE	3.4.11.14, 3.4.11.4	-	E	ko:K01258,ko:K01263	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
CLPCLEEF_01179	5.74e-108	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CLPCLEEF_01180	1.87e-290	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
CLPCLEEF_01181	7.89e-124	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
CLPCLEEF_01182	3.1e-127	pdxK	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
CLPCLEEF_01183	6.47e-259	pbpX1	-	-	V	-	-	-	Beta-lactamase
CLPCLEEF_01184	1.12e-149	maa3	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
CLPCLEEF_01185	1.12e-104	yvbK	-	-	K	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
CLPCLEEF_01186	4.87e-262	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
CLPCLEEF_01187	5.94e-148	-	-	-	I	-	-	-	Acid phosphatase homologues
CLPCLEEF_01188	7.77e-235	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
CLPCLEEF_01189	0.0	uvrA2	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC, A subunit
CLPCLEEF_01190	3.6e-106	-	-	-	C	-	-	-	Flavodoxin
CLPCLEEF_01191	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
CLPCLEEF_01192	3.24e-280	ynbB	-	-	P	-	-	-	aluminum resistance
CLPCLEEF_01193	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
CLPCLEEF_01194	0.0	-	-	-	E	-	-	-	Amino acid permease
CLPCLEEF_01195	9.58e-122	-	-	-	C	-	-	-	Pyridoxamine 5'-phosphate oxidase
CLPCLEEF_01196	7.18e-131	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
CLPCLEEF_01197	3.07e-35	-	-	-	S	-	-	-	Domain of unknown function (DUF771)
CLPCLEEF_01198	3.09e-46	-	-	-	K	-	-	-	Helix-turn-helix domain
CLPCLEEF_01200	2.95e-39	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CLPCLEEF_01202	3.21e-188	int3	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CLPCLEEF_01203	1.73e-202	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
CLPCLEEF_01204	1.85e-146	ybgF	-	-	E	ko:K02205,ko:K03293,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
CLPCLEEF_01205	9.3e-16	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
CLPCLEEF_01206	5.09e-85	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CLPCLEEF_01207	9.28e-89	crcB1	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CLPCLEEF_01208	3.71e-195	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
CLPCLEEF_01209	7.7e-126	-	-	-	L	-	-	-	Helix-turn-helix domain
CLPCLEEF_01210	3.21e-175	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
CLPCLEEF_01211	8.85e-121	-	-	-	M	-	-	-	LysM domain protein
CLPCLEEF_01212	9.11e-110	-	-	-	C	-	-	-	Aldo keto reductase
CLPCLEEF_01213	9.4e-232	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
CLPCLEEF_01214	8.06e-313	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
CLPCLEEF_01215	4.67e-116	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CLPCLEEF_01216	2.09e-180	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Phage integrase, N-terminal SAM-like domain
CLPCLEEF_01217	3.42e-314	trmFO	2.1.1.74	-	J	ko:K04094	-	ko00000,ko01000,ko03016,ko03036	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
CLPCLEEF_01218	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CLPCLEEF_01219	1.5e-195	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
CLPCLEEF_01220	1e-168	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CLPCLEEF_01221	2.15e-198	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CLPCLEEF_01222	2.4e-118	nhaP4	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
CLPCLEEF_01223	7.2e-49	nhaP4	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
CLPCLEEF_01224	3.67e-88	-	-	-	P	-	-	-	NhaP-type Na H and K H
CLPCLEEF_01225	9.85e-49	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
CLPCLEEF_01226	3.51e-190	degV3	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
CLPCLEEF_01227	1.8e-143	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
CLPCLEEF_01228	5.13e-287	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
CLPCLEEF_01229	3.86e-204	XK27_10395	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CLPCLEEF_01230	9.58e-112	-	3.4.21.96	-	S	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	SLAP domain
CLPCLEEF_01231	6.08e-161	yagE	-	-	E	-	-	-	Amino acid permease
CLPCLEEF_01232	8.49e-85	-	-	-	E	-	-	-	amino acid
CLPCLEEF_01233	2.16e-193	-	2.3.1.81	-	V	ko:K00662	-	ko00000,ko01000,ko01504	Aminoglycoside 3-N-acetyltransferase
CLPCLEEF_01234	6.64e-185	-	-	-	F	-	-	-	Phosphorylase superfamily
CLPCLEEF_01235	1.05e-176	-	-	-	F	-	-	-	Phosphorylase superfamily
CLPCLEEF_01236	9.82e-80	-	-	-	F	-	-	-	NUDIX domain
CLPCLEEF_01237	1.83e-103	-	-	-	S	-	-	-	AAA domain
CLPCLEEF_01238	1.5e-150	-	-	-	S	-	-	-	F420-0:Gamma-glutamyl ligase
CLPCLEEF_01239	1.91e-44	yxaM	-	-	EGP	-	-	-	Major facilitator Superfamily
CLPCLEEF_01240	1.87e-170	-	-	-	S	-	-	-	Alpha/beta hydrolase family
CLPCLEEF_01241	4.89e-122	rimL	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
CLPCLEEF_01242	2e-299	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CLPCLEEF_01243	1.43e-292	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
CLPCLEEF_01244	8.21e-57	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
CLPCLEEF_01245	5.45e-314	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
CLPCLEEF_01246	1.4e-281	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
CLPCLEEF_01247	1.96e-148	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
CLPCLEEF_01248	1.13e-41	-	-	-	M	-	-	-	Lysin motif
CLPCLEEF_01249	1.64e-143	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
CLPCLEEF_01250	4.65e-168	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
CLPCLEEF_01251	7.57e-135	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CLPCLEEF_01252	1.81e-169	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
CLPCLEEF_01253	1.13e-81	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
CLPCLEEF_01254	6.74e-213	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
CLPCLEEF_01255	1.21e-213	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
CLPCLEEF_01256	4.23e-46	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
CLPCLEEF_01257	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
CLPCLEEF_01258	5.46e-233	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
CLPCLEEF_01259	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
CLPCLEEF_01260	1.25e-38	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
CLPCLEEF_01261	0.0	yfkN	3.1.3.6, 3.1.4.16	-	F	ko:K01119	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
CLPCLEEF_01262	5.14e-38	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
CLPCLEEF_01263	3.57e-47	-	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
CLPCLEEF_01264	1.18e-183	-	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
CLPCLEEF_01265	6.82e-223	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
CLPCLEEF_01266	0.0	oatA	-	-	I	-	-	-	Acyltransferase
CLPCLEEF_01267	1.88e-309	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CLPCLEEF_01268	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
CLPCLEEF_01269	1.58e-140	yngC	-	-	S	-	-	-	SNARE associated Golgi protein
CLPCLEEF_01270	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
CLPCLEEF_01271	1.14e-230	gyaR	1.1.1.26, 1.1.1.399, 1.1.1.95	-	CH	ko:K00015,ko:K00058	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CLPCLEEF_01272	1.83e-190	yxeH	-	-	S	-	-	-	hydrolase
CLPCLEEF_01273	6.32e-41	-	-	-	S	-	-	-	reductase
CLPCLEEF_01274	2.98e-50	-	-	-	S	-	-	-	reductase
CLPCLEEF_01275	1.19e-43	-	-	-	S	-	-	-	reductase
CLPCLEEF_01276	4.66e-277	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CLPCLEEF_01277	5.51e-284	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
CLPCLEEF_01278	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
CLPCLEEF_01279	7.1e-311	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
CLPCLEEF_01280	1.8e-99	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
CLPCLEEF_01281	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CLPCLEEF_01282	3.8e-80	-	-	-	-	-	-	-	-
CLPCLEEF_01283	4.8e-224	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
CLPCLEEF_01284	1.3e-115	ybaK	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CLPCLEEF_01285	5.26e-15	-	-	-	-	-	-	-	-
CLPCLEEF_01287	9.28e-317	-	-	-	S	-	-	-	Putative threonine/serine exporter
CLPCLEEF_01288	4.29e-226	citR	-	-	K	-	-	-	Putative sugar-binding domain
CLPCLEEF_01289	2.41e-66	-	-	-	-	-	-	-	-
CLPCLEEF_01290	7.91e-14	-	-	-	-	-	-	-	-
CLPCLEEF_01291	8.1e-87	-	-	-	S	-	-	-	Domain of unknown function DUF1828
CLPCLEEF_01292	5.38e-125	-	-	-	S	ko:K16924	-	ko00000,ko00002,ko02000	UPF0397 protein
CLPCLEEF_01293	0.0	ykoD	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CLPCLEEF_01294	2.58e-189	cbiQ	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt transport
CLPCLEEF_01295	9.9e-30	-	-	-	-	-	-	-	-
CLPCLEEF_01296	1.24e-93	ytwI	-	-	S	-	-	-	Protein of unknown function (DUF441)
CLPCLEEF_01297	0.0	citF	2.8.3.10	-	H	ko:K01643	ko02020,map02020	ko00000,ko00001,ko01000	Citrate (pro-3S)-lyase alpha chain
CLPCLEEF_01298	1.79e-214	citE	4.1.3.34	-	G	ko:K01644	ko02020,map02020	ko00000,ko00001,ko01000	Belongs to the HpcH HpaI aldolase family
CLPCLEEF_01299	1.6e-59	citD	-	-	C	ko:K01646	ko02020,map02020	ko00000,ko00001	Covalent carrier of the coenzyme of citrate lyase
CLPCLEEF_01300	2.99e-248	citC	6.2.1.22	-	H	ko:K01910	ko02020,map02020	ko00000,ko00001,ko01000	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
CLPCLEEF_01301	2.56e-196	-	-	-	I	-	-	-	Alpha/beta hydrolase family
CLPCLEEF_01302	0.0	citP	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
CLPCLEEF_01303	5.26e-171	-	-	-	H	-	-	-	Aldolase/RraA
CLPCLEEF_01304	0.0	pepC4	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
CLPCLEEF_01305	1.66e-217	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
CLPCLEEF_01306	0.0	frdA	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
CLPCLEEF_01307	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
CLPCLEEF_01308	3.32e-122	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CLPCLEEF_01309	3.87e-241	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CLPCLEEF_01310	2.16e-205	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
CLPCLEEF_01311	2.57e-223	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
CLPCLEEF_01312	0.0	aha1	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
CLPCLEEF_01313	7.89e-119	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CLPCLEEF_01314	2.99e-230	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CLPCLEEF_01315	1.8e-316	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
CLPCLEEF_01316	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
CLPCLEEF_01317	1.58e-10	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
CLPCLEEF_01318	0.0	-	-	-	P	ko:K06148	-	ko00000,ko02000	ABC transporter
CLPCLEEF_01319	2.46e-48	-	-	-	-	-	-	-	-
CLPCLEEF_01321	1.46e-161	-	-	-	S	-	-	-	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
CLPCLEEF_01322	4.6e-113	-	-	-	K	-	-	-	GNAT family
CLPCLEEF_01323	5.25e-258	XK27_00915	-	-	C	-	-	-	Luciferase-like monooxygenase
CLPCLEEF_01324	4.45e-156	rbtT	-	-	P	ko:K13021	-	ko00000,ko02000	Major Facilitator Superfamily
CLPCLEEF_01325	2.81e-76	-	-	-	EGP	-	-	-	Major Facilitator
CLPCLEEF_01326	1.27e-42	-	-	-	K	-	-	-	Bacterial regulatory helix-turn-helix protein, lysR family
CLPCLEEF_01328	2.99e-114	tpx	1.11.1.15	-	O	ko:K11065	-	ko00000,ko01000	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CLPCLEEF_01329	0.0	-	-	-	L	-	-	-	Plasmid pRiA4b ORF-3-like protein
CLPCLEEF_01330	8.09e-314	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
CLPCLEEF_01331	6.21e-153	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
CLPCLEEF_01332	1.53e-142	ltrA	-	-	S	-	-	-	Bacterial low temperature requirement A protein (LtrA)
CLPCLEEF_01333	4.83e-107	ybbB	-	-	S	-	-	-	Protein of unknown function (DUF1211)
CLPCLEEF_01334	5.75e-152	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
CLPCLEEF_01335	6.44e-257	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CLPCLEEF_01336	2.25e-137	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin synthase
CLPCLEEF_01337	1.83e-92	ribBA	3.5.4.25, 4.1.99.12	-	H	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
CLPCLEEF_01338	1.15e-104	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
CLPCLEEF_01339	1.32e-114	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
CLPCLEEF_01340	2.52e-06	-	-	-	D	-	-	-	Domain of Unknown Function (DUF1542)
CLPCLEEF_01341	0.0	-	3.6.3.6	-	P	ko:K01535	ko00190,map00190	ko00000,ko00001,ko01000	Cation transporter/ATPase, N-terminus
CLPCLEEF_01342	4.97e-45	-	3.6.3.2, 3.6.3.6, 3.6.3.8	-	P	ko:K01531,ko:K01535,ko:K01537,ko:K12952	ko00190,map00190	ko00000,ko00001,ko01000	cation transport ATPase
CLPCLEEF_01344	8.44e-300	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
CLPCLEEF_01345	4.36e-93	-	-	-	K	ko:K03827	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
CLPCLEEF_01346	2.43e-95	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
CLPCLEEF_01347	2.33e-130	-	-	-	S	ko:K07025	-	ko00000	Haloacid dehalogenase-like hydrolase
CLPCLEEF_01348	3.87e-15	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FMN_bind
CLPCLEEF_01349	1.63e-109	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
CLPCLEEF_01350	1.73e-227	-	-	-	S	-	-	-	Conserved hypothetical protein 698
CLPCLEEF_01352	1.21e-243	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
CLPCLEEF_01353	1.94e-130	-	-	-	I	-	-	-	PAP2 superfamily
CLPCLEEF_01354	1.23e-187	-	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
CLPCLEEF_01355	1.43e-310	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
CLPCLEEF_01356	3.73e-72	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
CLPCLEEF_01357	3.87e-16	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
CLPCLEEF_01358	2.08e-95	yfhC	-	-	C	-	-	-	nitroreductase
CLPCLEEF_01359	1.57e-199	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
CLPCLEEF_01360	7.88e-79	celC	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose Cellobiose specific IIA subunit
CLPCLEEF_01361	2.19e-73	pts20B	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
CLPCLEEF_01362	4.65e-166	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA domain
CLPCLEEF_01363	0.0	pbg4	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CLPCLEEF_01364	2.06e-111	alkD	-	-	L	-	-	-	DNA alkylation repair enzyme
CLPCLEEF_01365	3.14e-226	iunH	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	inosine-uridine preferring nucleoside hydrolase
CLPCLEEF_01366	4.49e-108	-	-	-	-	-	-	-	-
CLPCLEEF_01367	1.83e-54	-	-	-	C	-	-	-	FMN_bind
CLPCLEEF_01368	0.0	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
CLPCLEEF_01369	4.2e-249	pbpX1	-	-	V	-	-	-	Beta-lactamase
CLPCLEEF_01370	2.48e-252	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CLPCLEEF_01371	9.03e-277	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
CLPCLEEF_01372	6.89e-185	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
CLPCLEEF_01373	3.66e-225	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CLPCLEEF_01374	3.29e-280	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
CLPCLEEF_01375	8.62e-105	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
CLPCLEEF_01376	1.39e-312	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
CLPCLEEF_01377	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
CLPCLEEF_01378	6.25e-246	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
CLPCLEEF_01379	1.27e-220	potE	-	-	E	-	-	-	Amino Acid
CLPCLEEF_01380	2.58e-48	potE	-	-	E	-	-	-	Amino Acid
CLPCLEEF_01381	1.59e-136	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
CLPCLEEF_01382	3.04e-297	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CLPCLEEF_01383	2.56e-291	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
CLPCLEEF_01384	5.76e-287	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CLPCLEEF_01385	5.43e-191	-	-	-	-	-	-	-	-
CLPCLEEF_01386	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CLPCLEEF_01387	7.11e-57	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CLPCLEEF_01388	3.64e-46	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
CLPCLEEF_01389	2.57e-226	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
CLPCLEEF_01390	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
CLPCLEEF_01391	2.7e-126	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
CLPCLEEF_01392	1.42e-244	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
CLPCLEEF_01393	7.07e-107	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CLPCLEEF_01394	5.21e-126	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
CLPCLEEF_01395	9.94e-71	ylbG	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2129)
CLPCLEEF_01396	3.91e-268	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
CLPCLEEF_01397	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
CLPCLEEF_01398	2.79e-131	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
CLPCLEEF_01399	5.22e-45	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
CLPCLEEF_01400	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CLPCLEEF_01401	2.39e-209	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
CLPCLEEF_01402	2.83e-252	-	-	-	L	-	-	-	Nuclease-related domain
CLPCLEEF_01403	4.4e-111	-	-	-	L	-	-	-	Nuclease-related domain
CLPCLEEF_01404	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
CLPCLEEF_01405	2.31e-148	-	-	-	S	-	-	-	repeat protein
CLPCLEEF_01406	4.7e-163	pgm	-	-	G	-	-	-	Phosphoglycerate mutase family
CLPCLEEF_01407	4.47e-278	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
CLPCLEEF_01408	9.98e-75	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
CLPCLEEF_01409	1.62e-276	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
CLPCLEEF_01410	2.05e-163	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CLPCLEEF_01411	1.22e-55	-	-	-	-	-	-	-	-
CLPCLEEF_01412	5.18e-134	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
CLPCLEEF_01413	2.32e-43	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
CLPCLEEF_01414	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CLPCLEEF_01415	6.3e-138	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
CLPCLEEF_01416	4.01e-192	ylmH	-	-	S	-	-	-	S4 domain protein
CLPCLEEF_01417	2.42e-60	yggT	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
CLPCLEEF_01418	1.43e-96	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
CLPCLEEF_01419	2.52e-300	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CLPCLEEF_01420	3.3e-315	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
CLPCLEEF_01421	3.14e-194	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
CLPCLEEF_01422	3.88e-264	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CLPCLEEF_01423	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CLPCLEEF_01424	4.43e-224	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CLPCLEEF_01425	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
CLPCLEEF_01426	6.55e-72	ftsL	-	-	D	-	-	-	Cell division protein FtsL
CLPCLEEF_01427	3e-223	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
CLPCLEEF_01428	5.63e-102	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
CLPCLEEF_01429	1.02e-72	-	-	-	S	-	-	-	Protein of unknown function (DUF3397)
CLPCLEEF_01430	1.4e-09	-	-	-	S	-	-	-	Protein of unknown function (DUF4044)
CLPCLEEF_01431	5.43e-122	mreD	-	-	-	ko:K03571	-	ko00000,ko03036	-
CLPCLEEF_01432	8.27e-189	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
CLPCLEEF_01433	8.26e-226	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
CLPCLEEF_01434	6.18e-150	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
CLPCLEEF_01435	1.06e-162	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
CLPCLEEF_01436	1.22e-306	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
CLPCLEEF_01437	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
CLPCLEEF_01438	2.91e-67	-	-	-	-	-	-	-	-
CLPCLEEF_01439	3.02e-166	-	-	-	S	ko:K06926	-	ko00000	AAA domain, putative AbiEii toxin, Type IV TA system
CLPCLEEF_01440	0.0	yoaB	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
CLPCLEEF_01441	9.25e-13	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CLPCLEEF_01442	8.53e-59	-	-	-	-	-	-	-	-
CLPCLEEF_01443	3.33e-123	-	-	-	S	-	-	-	Protein of unknown function (DUF3990)
CLPCLEEF_01444	4.08e-218	yfdH	-	GT2	M	ko:K12999	-	ko00000,ko01000,ko01003,ko01005	Glycosyltransferase, group 2 family protein
CLPCLEEF_01445	1.06e-86	-	-	-	S	-	-	-	GtrA-like protein
CLPCLEEF_01446	3.97e-57	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
CLPCLEEF_01447	6.01e-153	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
CLPCLEEF_01448	2.1e-232	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
CLPCLEEF_01449	3.48e-288	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CLPCLEEF_01450	4.1e-271	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
CLPCLEEF_01451	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
CLPCLEEF_01452	3.07e-142	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CLPCLEEF_01453	8.08e-110	-	-	-	S	-	-	-	Protein of unknown function (DUF1694)
CLPCLEEF_01454	5.98e-302	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
CLPCLEEF_01455	1.35e-56	-	-	-	-	-	-	-	-
CLPCLEEF_01456	9.45e-104	uspA	-	-	T	-	-	-	universal stress protein
CLPCLEEF_01457	1.18e-275	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
CLPCLEEF_01458	5.13e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
CLPCLEEF_01459	1.59e-68	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
CLPCLEEF_01460	4.81e-227	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
CLPCLEEF_01461	2.54e-42	-	-	-	S	-	-	-	Protein of unknown function (DUF1146)
CLPCLEEF_01462	2.45e-93	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
CLPCLEEF_01463	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CLPCLEEF_01464	1.04e-221	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CLPCLEEF_01465	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CLPCLEEF_01466	3.24e-120	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CLPCLEEF_01467	2.57e-83	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CLPCLEEF_01468	4.83e-37	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CLPCLEEF_01469	1.01e-166	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
CLPCLEEF_01470	5.28e-146	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CLPCLEEF_01471	1.36e-242	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
CLPCLEEF_01472	1.24e-198	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
CLPCLEEF_01473	6.6e-237	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CLPCLEEF_01474	9.98e-146	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
CLPCLEEF_01475	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Domain of unknown function (DUF1727)
CLPCLEEF_01478	3.94e-250	ampC	-	-	V	-	-	-	Beta-lactamase
CLPCLEEF_01479	4.63e-274	-	-	-	EGP	-	-	-	Major Facilitator
CLPCLEEF_01480	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
CLPCLEEF_01481	1.52e-136	vanZ	-	-	V	-	-	-	VanZ like family
CLPCLEEF_01482	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
CLPCLEEF_01483	0.0	yclK	-	-	T	-	-	-	Histidine kinase
CLPCLEEF_01484	4.96e-167	-	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
CLPCLEEF_01485	9.01e-90	-	-	-	S	-	-	-	SdpI/YhfL protein family
CLPCLEEF_01486	1.93e-242	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
CLPCLEEF_01487	1.72e-288	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
CLPCLEEF_01488	2.45e-127	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
CLPCLEEF_01489	3.68e-14	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
CLPCLEEF_01490	6.88e-11	-	-	-	T	ko:K07172	-	ko00000,ko02048	SpoVT / AbrB like domain
CLPCLEEF_01492	1.94e-22	-	-	-	S	-	-	-	Domain of Unknown Function with PDB structure (DUF3850)
CLPCLEEF_01493	4.83e-125	-	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	VirC1 protein
CLPCLEEF_01495	3.03e-54	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
CLPCLEEF_01496	6.8e-48	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	Bacterial toxin of type II toxin-antitoxin system, YafQ
CLPCLEEF_01497	6.51e-93	-	-	-	V	-	-	-	Type I restriction modification DNA specificity domain
CLPCLEEF_01498	2.27e-229	-	-	-	V	-	-	-	N-6 DNA Methylase
CLPCLEEF_01499	1.11e-131	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
CLPCLEEF_01500	1.71e-156	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
CLPCLEEF_01501	7.98e-35	-	-	-	GKT	-	-	-	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CLPCLEEF_01502	4.68e-25	-	2.7.1.200	-	G	ko:K02774	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
CLPCLEEF_01503	8.24e-257	-	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
CLPCLEEF_01504	7.62e-32	-	2.7.1.200	-	G	ko:K02773	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CLPCLEEF_01506	1.78e-21	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
CLPCLEEF_01507	5.85e-67	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
CLPCLEEF_01509	2.78e-45	-	-	-	-	-	-	-	-
CLPCLEEF_01511	7.63e-28	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
CLPCLEEF_01515	7.33e-19	-	-	-	-	-	-	-	-
CLPCLEEF_01516	1.19e-31	-	-	-	L	ko:K07473	-	ko00000,ko02048	Addiction module antitoxin, RelB DinJ family
CLPCLEEF_01519	2.04e-13	-	-	-	L	-	-	-	Protein of unknown function (DUF3991)
CLPCLEEF_01520	3.37e-21	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
CLPCLEEF_01521	2.64e-34	-	-	-	L	-	-	-	four-way junction helicase activity
CLPCLEEF_01525	4.26e-22	-	-	-	L	ko:K07467	-	ko00000	Replication initiation factor
CLPCLEEF_01526	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CLPCLEEF_01527	5.23e-97	nrdI	-	-	F	ko:K03647	-	ko00000	NrdI Flavodoxin like
CLPCLEEF_01528	1.48e-249	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CLPCLEEF_01529	1.07e-141	tnpR1	-	-	L	-	-	-	Resolvase, N terminal domain
CLPCLEEF_01530	6.91e-92	-	-	-	L	-	-	-	IS1381, transposase OrfA
CLPCLEEF_01531	4.87e-96	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CLPCLEEF_01532	1.17e-38	-	-	-	-	-	-	-	-
CLPCLEEF_01533	4.65e-184	-	-	-	D	-	-	-	AAA domain
CLPCLEEF_01534	5.88e-212	repA	-	-	S	-	-	-	Replication initiator protein A
CLPCLEEF_01535	1.14e-164	-	-	-	S	-	-	-	Fic/DOC family
CLPCLEEF_01536	1.79e-74	-	-	-	L	-	-	-	Resolvase, N-terminal
CLPCLEEF_01537	4.18e-208	-	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
CLPCLEEF_01538	1.86e-243	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
CLPCLEEF_01539	6.43e-143	-	-	-	S	-	-	-	Fic/DOC family
CLPCLEEF_01540	1.72e-22	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
CLPCLEEF_01549	8.52e-25	lysM	-	-	M	-	-	-	LysM domain
CLPCLEEF_01550	4.6e-194	-	-	-	S	-	-	-	COG0433 Predicted ATPase
CLPCLEEF_01554	4.46e-163	-	-	-	U	ko:K03205	ko03070,map03070	ko00000,ko00001,ko00002,ko02044	TraM recognition site of TraD and TraG
CLPCLEEF_01561	7.4e-19	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
CLPCLEEF_01567	4.48e-10	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
CLPCLEEF_01569	9.34e-231	-	-	-	L	-	-	-	N-6 DNA Methylase
CLPCLEEF_01570	1.49e-47	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CLPCLEEF_01571	6.57e-45	-	-	-	S	-	-	-	Phage derived protein Gp49-like (DUF891)
CLPCLEEF_01577	2.72e-35	-	-	-	S	-	-	-	Domain of unknown function (DUF771)
CLPCLEEF_01578	2.91e-37	-	-	-	K	-	-	-	Helix-turn-helix domain
CLPCLEEF_01579	1.12e-28	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix domain
CLPCLEEF_01580	1.74e-33	-	-	-	K	-	-	-	Helix-turn-helix domain
CLPCLEEF_01582	2.76e-189	int3	-	-	L	-	-	-	Belongs to the 'phage' integrase family
CLPCLEEF_01585	1.07e-281	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CLPCLEEF_01586	2.42e-238	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
CLPCLEEF_01587	3.69e-30	-	-	-	-	-	-	-	-
CLPCLEEF_01588	1.94e-100	-	-	-	U	ko:K02248	-	ko00000,ko00002,ko02044	Putative Competence protein ComGF
CLPCLEEF_01589	1.68e-55	-	-	-	-	-	-	-	-
CLPCLEEF_01590	8.19e-91	-	-	-	-	ko:K02246	-	ko00000,ko00002,ko02044	-
CLPCLEEF_01591	7.88e-63	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	competence protein ComGC
CLPCLEEF_01592	1.72e-222	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
CLPCLEEF_01593	5.04e-231	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
CLPCLEEF_01594	1.62e-170	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
CLPCLEEF_01595	2.33e-120	-	-	-	S	-	-	-	VanZ like family
CLPCLEEF_01596	1.49e-130	ylbE	-	-	GM	-	-	-	NAD(P)H-binding
CLPCLEEF_01597	3.96e-37	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CLPCLEEF_01599	4.31e-204	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
CLPCLEEF_01600	2.15e-127	-	-	-	L	-	-	-	Helix-turn-helix domain
CLPCLEEF_01601	0.0	-	-	-	E	-	-	-	Amino acid permease
CLPCLEEF_01603	1.14e-99	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CLPCLEEF_01604	1.96e-110	-	2.7.7.65	-	T	ko:K02488	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko00002,ko01000,ko02022	GGDEF domain
CLPCLEEF_01605	2.64e-46	-	-	-	-	-	-	-	-
CLPCLEEF_01606	1.67e-136	icaA	-	-	M	-	-	-	Glycosyl transferase family group 2
CLPCLEEF_01607	2.21e-34	-	4.1.2.50, 4.2.3.12	-	H	ko:K01737	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000,ko03016	6-pyruvoyl tetrahydropterin synthase
CLPCLEEF_01608	4.11e-44	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
CLPCLEEF_01609	1.74e-60	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
CLPCLEEF_01610	5.12e-199	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
CLPCLEEF_01611	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
CLPCLEEF_01612	0.0	pts33BCA	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
CLPCLEEF_01613	8.39e-195	bglG5	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
CLPCLEEF_01614	2.52e-262	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
CLPCLEEF_01615	3.07e-112	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CLPCLEEF_01616	2.85e-153	-	-	-	-	-	-	-	-
CLPCLEEF_01617	3.23e-98	copY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Penicillinase repressor
CLPCLEEF_01618	8.04e-190	-	-	-	S	-	-	-	hydrolase
CLPCLEEF_01619	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CLPCLEEF_01620	2.76e-221	ybbR	-	-	S	-	-	-	YbbR-like protein
CLPCLEEF_01621	2.13e-194	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
CLPCLEEF_01622	3.46e-266	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CLPCLEEF_01623	3.69e-170	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CLPCLEEF_01624	8.77e-173	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CLPCLEEF_01625	1.25e-263	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
CLPCLEEF_01626	2.84e-208	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
CLPCLEEF_01627	1.51e-127	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
CLPCLEEF_01628	4.82e-113	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
CLPCLEEF_01629	1.1e-232	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
CLPCLEEF_01630	1.64e-174	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CLPCLEEF_01631	2.81e-200	ycsE	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
CLPCLEEF_01632	7.25e-123	-	-	-	-	-	-	-	-
CLPCLEEF_01633	3.6e-235	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
CLPCLEEF_01634	5.46e-183	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
CLPCLEEF_01635	2.86e-286	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
CLPCLEEF_01636	2.86e-244	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
CLPCLEEF_01637	9.53e-241	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	Putative sugar-binding domain
CLPCLEEF_01639	0.0	-	-	-	-	-	-	-	-
CLPCLEEF_01640	0.0	ycaM	-	-	E	-	-	-	amino acid
CLPCLEEF_01641	1.43e-178	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
CLPCLEEF_01642	7.65e-101	-	-	-	K	-	-	-	MerR HTH family regulatory protein
CLPCLEEF_01643	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
CLPCLEEF_01644	4.64e-63	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
CLPCLEEF_01645	4.76e-168	ybbM	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
CLPCLEEF_01646	3.16e-144	ybbL	-	-	S	ko:K02068	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CLPCLEEF_01647	0.0	-	-	-	S	-	-	-	SH3-like domain
CLPCLEEF_01648	1.16e-128	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
CLPCLEEF_01649	8.59e-221	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
CLPCLEEF_01650	2.78e-251	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
CLPCLEEF_01651	2.44e-211	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
CLPCLEEF_01652	1.55e-117	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
CLPCLEEF_01653	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
CLPCLEEF_01654	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
CLPCLEEF_01655	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
CLPCLEEF_01656	3.42e-232	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
CLPCLEEF_01657	3.31e-239	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
CLPCLEEF_01658	4.04e-203	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CLPCLEEF_01659	3.54e-230	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
CLPCLEEF_01660	8.33e-27	-	-	-	-	-	-	-	-
CLPCLEEF_01661	2.24e-238	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CLPCLEEF_01662	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
CLPCLEEF_01663	1.55e-122	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CLPCLEEF_01664	9.44e-169	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
CLPCLEEF_01665	2.68e-314	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
CLPCLEEF_01666	5.04e-154	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
CLPCLEEF_01667	1.94e-268	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	transferase
CLPCLEEF_01668	3.03e-293	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
CLPCLEEF_01669	1.17e-248	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CLPCLEEF_01670	3.92e-123	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CLPCLEEF_01671	1.63e-154	ymfM	-	-	S	ko:K15539	-	ko00000	Helix-turn-helix domain
CLPCLEEF_01672	1.39e-171	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
CLPCLEEF_01673	5.49e-301	ymfH	-	-	S	-	-	-	Peptidase M16
CLPCLEEF_01674	1.47e-284	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
CLPCLEEF_01675	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
CLPCLEEF_01676	3.12e-91	-	-	-	S	-	-	-	Protein of unknown function (DUF1149)
CLPCLEEF_01677	2.12e-136	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
CLPCLEEF_01678	2.19e-270	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
CLPCLEEF_01679	1.99e-87	srlB	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
CLPCLEEF_01680	1.01e-255	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
CLPCLEEF_01681	3.77e-122	-	-	-	S	-	-	-	SNARE associated Golgi protein
CLPCLEEF_01682	0.0	mycA	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
CLPCLEEF_01683	7.96e-221	rluD2	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
CLPCLEEF_01684	1.91e-195	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CLPCLEEF_01685	1.7e-147	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
CLPCLEEF_01686	2.44e-143	-	-	-	S	-	-	-	CYTH
CLPCLEEF_01687	5.74e-148	yjbH	-	-	Q	-	-	-	Thioredoxin
CLPCLEEF_01688	2.63e-205	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
CLPCLEEF_01689	1.5e-178	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
CLPCLEEF_01690	6.28e-87	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
CLPCLEEF_01691	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CLPCLEEF_01692	1.29e-54	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
CLPCLEEF_01693	2.6e-37	-	-	-	-	-	-	-	-
CLPCLEEF_01694	0.0	clpE	-	-	O	ko:K03697	-	ko00000,ko03110	Belongs to the ClpA ClpB family
CLPCLEEF_01695	5.93e-60	XK27_09445	-	-	S	-	-	-	Domain of unknown function (DUF1827)
CLPCLEEF_01696	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
CLPCLEEF_01697	1.76e-181	hlyX	-	-	S	ko:K03699	-	ko00000,ko02042	Transporter associated domain
CLPCLEEF_01698	7.76e-98	-	-	-	-	-	-	-	-
CLPCLEEF_01699	1.74e-111	-	-	-	-	-	-	-	-
CLPCLEEF_01700	2.79e-185	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
CLPCLEEF_01701	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CLPCLEEF_01702	1.94e-150	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
CLPCLEEF_01703	1.04e-48	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
CLPCLEEF_01704	7.74e-61	-	-	-	-	-	-	-	-
CLPCLEEF_01705	4.42e-269	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
CLPCLEEF_01706	1.22e-272	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
CLPCLEEF_01707	3.22e-215	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
CLPCLEEF_01708	3.44e-209	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
CLPCLEEF_01709	9.98e-211	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
CLPCLEEF_01710	5.14e-105	ykuP	-	-	C	ko:K03839	-	ko00000	Flavodoxin
CLPCLEEF_01711	7.46e-113	gtcA1	-	-	S	-	-	-	Teichoic acid glycosylation protein
CLPCLEEF_01712	1.62e-278	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
CLPCLEEF_01714	3.76e-316	chbC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CLPCLEEF_01715	5.96e-283	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
CLPCLEEF_01716	2.16e-79	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CLPCLEEF_01717	6.73e-78	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CLPCLEEF_01718	2.22e-296	-	-	-	E	ko:K03294	-	ko00000	amino acid
CLPCLEEF_01719	7.32e-157	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
CLPCLEEF_01720	6.74e-269	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
CLPCLEEF_01721	5.83e-67	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
CLPCLEEF_01722	1.73e-114	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
CLPCLEEF_01723	0.0	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
CLPCLEEF_01724	8.59e-133	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
CLPCLEEF_01725	0.0	yhdP	-	-	S	-	-	-	Transporter associated domain
CLPCLEEF_01726	2.14e-154	-	-	-	C	-	-	-	nitroreductase
CLPCLEEF_01727	1.76e-52	-	-	-	-	-	-	-	-
CLPCLEEF_01728	1.96e-113	ptbA	2.7.1.208	-	G	ko:K02755,ko:K02777,ko:K20107,ko:K20108	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
CLPCLEEF_01729	1.52e-103	-	-	-	-	-	-	-	-
CLPCLEEF_01730	6.89e-190	glvR	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
CLPCLEEF_01731	0.0	glvC	2.7.1.208	-	G	ko:K02749,ko:K02750	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
CLPCLEEF_01732	7.44e-189	-	-	-	S	-	-	-	hydrolase
CLPCLEEF_01733	1.85e-205	-	-	-	S	-	-	-	Phospholipase, patatin family
CLPCLEEF_01734	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
CLPCLEEF_01735	4.44e-174	-	-	-	K	ko:K22103	-	ko00000,ko03000	DeoR C terminal sensor domain
CLPCLEEF_01736	2.9e-79	-	-	-	S	-	-	-	Enterocin A Immunity
CLPCLEEF_01737	3.18e-198	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
CLPCLEEF_01738	6.63e-174	gntR	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
CLPCLEEF_01739	1.01e-222	rihC	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
CLPCLEEF_01740	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
CLPCLEEF_01741	1.82e-161	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CLPCLEEF_01742	8.52e-215	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CLPCLEEF_01743	7.29e-209	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
CLPCLEEF_01744	2.2e-308	srrA1	-	-	G	ko:K02027,ko:K17244	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
CLPCLEEF_01745	3.52e-296	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
CLPCLEEF_01746	2.09e-110	-	-	-	-	-	-	-	-
CLPCLEEF_01747	1.04e-211	-	-	-	S	-	-	-	Protein of unknown function (DUF2974)
CLPCLEEF_01748	3.65e-141	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CLPCLEEF_01749	4.29e-122	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CLPCLEEF_01750	3.39e-187	glnH	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CLPCLEEF_01751	2.8e-173	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
CLPCLEEF_01752	2.72e-60	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Zeta toxin
CLPCLEEF_01753	5.43e-50	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Zeta toxin
CLPCLEEF_01754	8.41e-314	-	-	-	G	-	-	-	MFS/sugar transport protein
CLPCLEEF_01755	1.72e-129	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
CLPCLEEF_01756	0.0	XK27_09605	-	-	V	ko:K18892	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter transmembrane region
CLPCLEEF_01757	0.0	XK27_09600	-	-	V	ko:K06147,ko:K18891	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
CLPCLEEF_01758	2.53e-106	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
CLPCLEEF_01759	2.05e-188	peb1A	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
CLPCLEEF_01760	1.07e-165	-	-	-	F	-	-	-	glutamine amidotransferase
CLPCLEEF_01761	3.41e-312	steT	-	-	E	ko:K03294	-	ko00000	amino acid
CLPCLEEF_01762	3.97e-33	steT	-	-	E	ko:K03294	-	ko00000	amino acid
CLPCLEEF_01763	1.11e-256	steT	-	-	E	ko:K03294	-	ko00000	amino acid
CLPCLEEF_01764	1.53e-176	-	-	-	-	-	-	-	-
CLPCLEEF_01765	6.07e-223	ydhF	-	-	S	-	-	-	Aldo keto reductase
CLPCLEEF_01766	0.0	ykpA	-	-	S	-	-	-	ABC transporter, ATP-binding protein
CLPCLEEF_01767	2.33e-230	pepA	-	-	E	-	-	-	M42 glutamyl aminopeptidase
CLPCLEEF_01768	1.06e-195	pmrA	-	-	EGP	ko:K08161	-	ko00000,ko02000	MFS_1 like family
CLPCLEEF_01769	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
CLPCLEEF_01770	1.02e-115	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CLPCLEEF_01771	3.34e-303	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
CLPCLEEF_01772	3.55e-28	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative DNA-binding domain
CLPCLEEF_01773	8.97e-47	-	-	-	-	-	-	-	-
CLPCLEEF_01774	5.94e-200	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
CLPCLEEF_01775	6.13e-110	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CLPCLEEF_01776	6.61e-186	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
CLPCLEEF_01777	0.0	-	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
CLPCLEEF_01778	1.52e-119	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CLPCLEEF_01779	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
CLPCLEEF_01784	1.42e-122	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CLPCLEEF_01785	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CLPCLEEF_01786	1.01e-256	flp	-	-	V	-	-	-	Beta-lactamase
CLPCLEEF_01787	2.79e-309	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
CLPCLEEF_01788	9.92e-187	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
CLPCLEEF_01789	1.46e-75	-	-	-	-	-	-	-	-
CLPCLEEF_01790	2.61e-148	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
CLPCLEEF_01791	5.58e-219	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
CLPCLEEF_01792	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CLPCLEEF_01793	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
CLPCLEEF_01794	5.42e-67	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CLPCLEEF_01795	6.25e-268	camS	-	-	S	-	-	-	sex pheromone
CLPCLEEF_01796	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CLPCLEEF_01797	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
CLPCLEEF_01798	2.26e-118	acmA	3.2.1.17, 3.2.1.96	-	NU	ko:K01185,ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	mannosyl-glycoprotein
CLPCLEEF_01800	2.62e-109	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
CLPCLEEF_01801	5.48e-173	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
CLPCLEEF_01802	0.0	epsU	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
CLPCLEEF_01803	9.16e-287	-	-	-	M	-	-	-	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
CLPCLEEF_01804	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
CLPCLEEF_01805	9.83e-261	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
CLPCLEEF_01806	1.91e-195	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
CLPCLEEF_01807	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CLPCLEEF_01808	1.03e-261	-	-	-	M	-	-	-	Glycosyl transferases group 1
CLPCLEEF_01809	3.02e-171	tagA	2.4.1.187	GT26	F	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
CLPCLEEF_01810	3.68e-93	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Glycerol-3-phosphate cytidylyltransferase
CLPCLEEF_01811	9.75e-163	gntR1	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
CLPCLEEF_01812	2.17e-232	-	-	-	-	-	-	-	-
CLPCLEEF_01813	1.15e-54	oppA2	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CLPCLEEF_01814	7.83e-303	oppA2	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CLPCLEEF_01817	4.41e-305	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	NADH oxidase
CLPCLEEF_01818	1.18e-13	-	-	-	-	-	-	-	-
CLPCLEEF_01819	6.39e-32	-	-	-	S	-	-	-	transposase or invertase
CLPCLEEF_01820	3.98e-210	slpX	-	-	S	-	-	-	SLAP domain
CLPCLEEF_01821	1.76e-65	slpX	-	-	S	-	-	-	SLAP domain
CLPCLEEF_01822	1.43e-186	-	-	-	K	-	-	-	SIS domain
CLPCLEEF_01823	3.01e-154	rpiA1	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
CLPCLEEF_01824	1.03e-237	XK27_10475	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
CLPCLEEF_01825	1.93e-266	araT	2.6.1.57	-	E	ko:K00832,ko:K00841	ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
CLPCLEEF_01827	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
CLPCLEEF_01829	2.67e-148	glpQ1	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
CLPCLEEF_01830	1.9e-153	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
CLPCLEEF_01831	9.01e-115	-	-	-	G	-	-	-	Histidine phosphatase superfamily (branch 1)
CLPCLEEF_01832	8.92e-136	-	-	-	G	-	-	-	Phosphoglycerate mutase family
CLPCLEEF_01833	5.68e-211	-	-	-	D	-	-	-	nuclear chromosome segregation
CLPCLEEF_01834	1.33e-130	-	-	-	M	-	-	-	LysM domain protein
CLPCLEEF_01835	2.57e-108	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CLPCLEEF_01836	6.31e-99	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CLPCLEEF_01837	1.83e-22	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CLPCLEEF_01838	1.25e-17	-	-	-	-	-	-	-	-
CLPCLEEF_01839	1.32e-218	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase
CLPCLEEF_01840	1.04e-41	-	-	-	-	-	-	-	-
CLPCLEEF_01842	3.65e-90	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
CLPCLEEF_01843	1.08e-145	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
CLPCLEEF_01844	3.31e-79	psiE	-	-	S	ko:K13256	-	ko00000	Phosphate-starvation-inducible E
CLPCLEEF_01846	6.58e-175	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
CLPCLEEF_01847	4.26e-290	amt	-	-	P	ko:K03320	-	ko00000,ko02000	ammonium transporter
CLPCLEEF_01848	7.82e-80	-	-	-	-	-	-	-	-
CLPCLEEF_01849	0.0	-	-	-	L	ko:K03724	-	ko00000,ko01000,ko03400	DEAD DEAH box helicase
CLPCLEEF_01850	2.14e-312	-	-	-	P	-	-	-	P-loop Domain of unknown function (DUF2791)
CLPCLEEF_01851	5.53e-173	-	-	-	S	-	-	-	TerB-C domain
CLPCLEEF_01852	1.23e-242	-	-	-	S	-	-	-	TerB-C domain
CLPCLEEF_01853	0.0	pckA	4.1.1.49	-	H	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Phosphoenolpyruvate carboxykinase
CLPCLEEF_01854	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
CLPCLEEF_01855	5.89e-126	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CLPCLEEF_01856	9.05e-78	apfA	3.6.1.61	-	F	ko:K18445	ko00230,map00230	ko00000,ko00001,ko01000	Nudix hydrolase
CLPCLEEF_01857	3.36e-42	-	-	-	-	-	-	-	-
CLPCLEEF_01858	1.78e-100	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
CLPCLEEF_01859	5.26e-36	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
CLPCLEEF_01860	2.7e-277	mtlD	1.1.1.17	-	C	ko:K00009	ko00051,map00051	ko00000,ko00001,ko01000	mannitol-1-phosphate 5-dehydrogenase activity
CLPCLEEF_01861	5.75e-103	mtlF	2.7.1.197	-	G	ko:K02798	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CLPCLEEF_01862	0.0	mtlA	2.7.1.197	-	G	ko:K02799,ko:K02800	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
CLPCLEEF_01863	0.0	mtlR	-	-	K	ko:K03483	-	ko00000,ko03000	Mga helix-turn-helix domain
CLPCLEEF_01864	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
CLPCLEEF_01865	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
CLPCLEEF_01866	4.47e-58	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
CLPCLEEF_01867	1.13e-308	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
CLPCLEEF_01868	7.06e-111	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
CLPCLEEF_01869	2.07e-203	-	-	-	K	-	-	-	Transcriptional regulator
CLPCLEEF_01870	1.31e-81	-	-	-	S	-	-	-	Domain of unknown function (DUF956)
CLPCLEEF_01871	3.51e-222	manN	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	system, mannose fructose sorbose family IID component
CLPCLEEF_01872	9.65e-181	manY	-	-	G	ko:K02746,ko:K02795	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system
CLPCLEEF_01873	2.72e-236	manL	2.7.1.191	-	G	ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
CLPCLEEF_01875	1.38e-165	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
CLPCLEEF_01876	9.06e-184	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
CLPCLEEF_01877	1.44e-53	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
CLPCLEEF_01878	4.98e-37	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
CLPCLEEF_01879	0.0	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CLPCLEEF_01880	1.23e-129	yjcK	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
CLPCLEEF_01881	3.2e-143	-	-	-	S	-	-	-	SNARE associated Golgi protein
CLPCLEEF_01882	2.52e-194	-	-	-	I	-	-	-	alpha/beta hydrolase fold
CLPCLEEF_01883	1.15e-201	plcR	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
CLPCLEEF_01884	3.54e-19	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
CLPCLEEF_01885	1.41e-37	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
CLPCLEEF_01886	2.35e-117	-	-	-	F	-	-	-	Nucleoside 2-deoxyribosyltransferase
CLPCLEEF_01887	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
CLPCLEEF_01888	1.2e-220	-	-	-	-	-	-	-	-
CLPCLEEF_01889	1.86e-31	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CLPCLEEF_01891	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
CLPCLEEF_01892	1.53e-127	yobS	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CLPCLEEF_01893	1.89e-205	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
CLPCLEEF_01894	1.4e-207	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
CLPCLEEF_01895	1.23e-309	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
CLPCLEEF_01896	0.0	-	-	-	S	-	-	-	Zn-dependent metallo-hydrolase RNA specificity domain
CLPCLEEF_01897	3.25e-186	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CLPCLEEF_01898	1.64e-202	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	ABC-type sugar transport systems, permease components
CLPCLEEF_01899	5.26e-259	malK	-	-	P	ko:K10112,ko:K17240	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
CLPCLEEF_01900	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CLPCLEEF_01901	7.24e-204	endA	-	-	F	ko:K15051	-	ko00000	DNA RNA non-specific endonuclease
CLPCLEEF_01902	1.29e-230	-	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	EXOIII
CLPCLEEF_01903	5.11e-203	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CLPCLEEF_01904	2.23e-150	yviA	-	-	S	-	-	-	Protein of unknown function (DUF421)
CLPCLEEF_01905	2.94e-74	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
CLPCLEEF_01906	7.8e-10	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
CLPCLEEF_01907	3.85e-180	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
CLPCLEEF_01908	4.53e-11	-	-	-	-	-	-	-	-
CLPCLEEF_01909	1.02e-75	-	-	-	-	-	-	-	-
CLPCLEEF_01910	2.62e-69	-	-	-	-	-	-	-	-
CLPCLEEF_01912	4.4e-165	-	-	-	S	-	-	-	PAS domain
CLPCLEEF_01913	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
CLPCLEEF_01914	1.28e-228	pepR	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
CLPCLEEF_01915	1.75e-168	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
CLPCLEEF_01916	2.37e-242	-	-	-	T	-	-	-	GHKL domain
CLPCLEEF_01917	2.88e-98	ykoJ	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
CLPCLEEF_01918	5.59e-109	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
CLPCLEEF_01919	8e-108	XK27_03150	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
CLPCLEEF_01920	8.64e-85	yybA	-	-	K	-	-	-	Transcriptional regulator
CLPCLEEF_01921	2.91e-83	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter transmembrane region
CLPCLEEF_01922	1.13e-201	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter transmembrane region
CLPCLEEF_01923	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CLPCLEEF_01924	1.73e-79	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
CLPCLEEF_01925	1.45e-36	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
CLPCLEEF_01926	2.15e-299	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
CLPCLEEF_01927	1.24e-75	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
CLPCLEEF_01928	1.48e-134	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CLPCLEEF_01929	1.95e-218	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
CLPCLEEF_01930	1.88e-125	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
CLPCLEEF_01931	1.36e-96	yjcF	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
CLPCLEEF_01932	7.09e-184	aatB	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
CLPCLEEF_01933	6.89e-136	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
CLPCLEEF_01934	3e-139	yecS_2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
CLPCLEEF_01935	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
CLPCLEEF_01936	1.51e-150	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
CLPCLEEF_01937	7.53e-163	gpm2	-	-	G	-	-	-	Phosphoglycerate mutase family
CLPCLEEF_01938	1.87e-308	-	-	-	S	-	-	-	response to antibiotic
CLPCLEEF_01939	1.56e-161	-	-	-	-	-	-	-	-
CLPCLEEF_01940	0.0	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
CLPCLEEF_01941	7.34e-86	-	2.7.1.191	-	G	ko:K02793	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
CLPCLEEF_01942	5.1e-57	-	-	-	-	-	-	-	-
CLPCLEEF_01943	6.6e-14	-	-	-	-	-	-	-	-
CLPCLEEF_01944	4.71e-239	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase, type I
CLPCLEEF_01945	8.28e-176	-	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
CLPCLEEF_01946	0.0	malH	3.2.1.122	GH4	G	ko:K01232	ko00500,map00500	ko00000,ko00001,ko01000	Family 4 glycosyl hydrolase C-terminal domain
CLPCLEEF_01947	8.75e-197	-	-	-	-	-	-	-	-
CLPCLEEF_01948	3.32e-13	-	-	-	-	-	-	-	-
CLPCLEEF_01949	5.45e-121	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
CLPCLEEF_01950	5.6e-135	-	-	-	K	ko:K06977	-	ko00000	acetyltransferase
CLPCLEEF_01953	4.92e-20	-	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
CLPCLEEF_01954	1.23e-58	-	-	-	S	-	-	-	polysaccharide biosynthetic process
CLPCLEEF_01955	5.53e-43	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
CLPCLEEF_01956	6.72e-285	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CLPCLEEF_01957	1.26e-223	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
CLPCLEEF_01958	3.01e-54	-	-	-	-	-	-	-	-
CLPCLEEF_01959	1.73e-167	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
CLPCLEEF_01960	1.28e-174	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
CLPCLEEF_01961	1.47e-114	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
CLPCLEEF_01962	4.26e-115	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase homologues.
CLPCLEEF_01963	4.52e-56	-	-	-	-	-	-	-	-
CLPCLEEF_01964	0.0	-	-	-	S	-	-	-	O-antigen ligase like membrane protein
CLPCLEEF_01965	8.77e-144	-	-	-	-	-	-	-	-
CLPCLEEF_01966	5.48e-283	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
CLPCLEEF_01967	4.75e-101	nrdI	-	-	F	ko:K03647	-	ko00000	NrdI Flavodoxin like
CLPCLEEF_01968	1.96e-226	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CLPCLEEF_01969	1.16e-101	-	-	-	-	-	-	-	-
CLPCLEEF_01970	1.58e-143	-	-	-	S	-	-	-	Peptidase_C39 like family
CLPCLEEF_01971	7.36e-109	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
CLPCLEEF_01972	7.35e-174	-	-	-	S	-	-	-	Putative threonine/serine exporter
CLPCLEEF_01973	0.0	-	-	-	S	-	-	-	ABC transporter
CLPCLEEF_01974	2.52e-76	-	-	-	-	-	-	-	-
CLPCLEEF_01975	8.69e-93	rimL	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
CLPCLEEF_01976	5.49e-46	-	-	-	-	-	-	-	-
CLPCLEEF_01977	7.2e-40	-	-	-	-	-	-	-	-
CLPCLEEF_01978	2.33e-143	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
CLPCLEEF_01979	5.74e-256	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
CLPCLEEF_01980	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
CLPCLEEF_01981	7.27e-42	-	-	-	-	-	-	-	-
CLPCLEEF_01982	1.47e-91	doc	-	-	S	ko:K07341	-	ko00000,ko02048	Prophage maintenance system killer protein
CLPCLEEF_01985	4.61e-37	-	-	-	S	-	-	-	Enterocin A Immunity
CLPCLEEF_01987	5.2e-119	-	-	-	D	-	-	-	ftsk spoiiie
CLPCLEEF_01989	2.13e-53	-	-	-	-	-	-	-	-
CLPCLEEF_01990	4.61e-304	sthIR	3.1.21.5	-	L	ko:K01156	-	ko00000,ko01000,ko02048	Type III restriction enzyme, res subunit
CLPCLEEF_01991	4.67e-75	-	2.1.1.72	-	L	ko:K07316	-	ko00000,ko01000,ko02048	DNA methylase
CLPCLEEF_01992	7.28e-209	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
CLPCLEEF_01994	1.13e-35	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
CLPCLEEF_01995	0.000868	-	-	-	-	-	-	-	-
CLPCLEEF_01996	2.04e-277	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
CLPCLEEF_01997	6.6e-115	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
CLPCLEEF_01998	0.0	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
CLPCLEEF_01999	1.59e-172	znuB	-	-	U	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
CLPCLEEF_02000	1.63e-152	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
CLPCLEEF_02001	9.9e-209	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
CLPCLEEF_02002	4.47e-56	-	-	-	K	ko:K21903	-	ko00000,ko03000	helix_turn_helix, Arsenical Resistance Operon Repressor
CLPCLEEF_02003	0.0	fruA	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase System
CLPCLEEF_02004	2.18e-215	pfkB	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family. LacC subfamily
CLPCLEEF_02005	3.14e-175	fruR	-	-	K	ko:K03436	-	ko00000,ko03000	DeoR C terminal sensor domain
CLPCLEEF_02006	6.39e-279	natB	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
CLPCLEEF_02007	3.09e-212	natA	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CLPCLEEF_02008	3.41e-88	-	-	-	-	-	-	-	-
CLPCLEEF_02009	2.52e-32	-	-	-	-	-	-	-	-
CLPCLEEF_02010	6.32e-42	-	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
CLPCLEEF_02011	4.74e-107	-	-	-	-	-	-	-	-
CLPCLEEF_02012	7.87e-30	-	-	-	-	-	-	-	-
CLPCLEEF_02016	5.02e-180	blpT	-	-	-	-	-	-	-
CLPCLEEF_02017	3.2e-137	mesE	-	-	M	ko:K12293,ko:K20345	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko02000	Transport protein ComB
CLPCLEEF_02018	1.85e-141	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
CLPCLEEF_02019	0.0	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
CLPCLEEF_02020	2.85e-165	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
CLPCLEEF_02021	2.07e-168	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
CLPCLEEF_02022	1.89e-23	-	-	-	-	-	-	-	-
CLPCLEEF_02023	0.0	-	-	-	S	ko:K06921	-	ko00000	Archaea bacterial proteins of unknown function
CLPCLEEF_02024	0.0	agl	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
CLPCLEEF_02025	0.0	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
CLPCLEEF_02026	4.48e-34	-	-	-	-	-	-	-	-
CLPCLEEF_02027	1.07e-35	-	-	-	-	-	-	-	-
CLPCLEEF_02028	1.95e-45	-	-	-	-	-	-	-	-
CLPCLEEF_02029	6.94e-70	-	-	-	S	-	-	-	Enterocin A Immunity
CLPCLEEF_02030	7.79e-186	racD	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
CLPCLEEF_02031	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CLPCLEEF_02032	9.28e-271	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
CLPCLEEF_02033	8.32e-157	vanR	-	-	K	-	-	-	response regulator
CLPCLEEF_02035	0.0	ndvA	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
CLPCLEEF_02036	1.01e-43	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter, ATP-binding protein
CLPCLEEF_02037	1.18e-118	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter, ATP-binding protein
CLPCLEEF_02038	1.22e-190	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter, ATP-binding protein
CLPCLEEF_02039	3.93e-176	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
CLPCLEEF_02040	6.88e-257	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
CLPCLEEF_02041	1.1e-59	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
CLPCLEEF_02042	1.49e-197	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
CLPCLEEF_02043	4.99e-178	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
CLPCLEEF_02044	1.18e-190	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
CLPCLEEF_02045	3.66e-166	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
CLPCLEEF_02046	2.99e-75	cvpA	-	-	S	-	-	-	Colicin V production protein
CLPCLEEF_02047	5.24e-230	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
CLPCLEEF_02048	9.48e-194	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
CLPCLEEF_02049	2.58e-126	azr	1.5.1.36	-	S	ko:K22394	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
CLPCLEEF_02050	3.41e-125	azo1	1.5.1.36, 1.7.1.6	-	S	ko:K03206,ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
CLPCLEEF_02051	1.25e-143	-	-	-	K	-	-	-	WHG domain
CLPCLEEF_02052	2.63e-50	-	-	-	-	-	-	-	-
CLPCLEEF_02053	0.0	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
CLPCLEEF_02054	2.12e-132	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CLPCLEEF_02055	1.05e-233	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
CLPCLEEF_02056	1.45e-119	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
CLPCLEEF_02057	2.75e-143	-	-	-	G	-	-	-	phosphoglycerate mutase
CLPCLEEF_02058	1.62e-179	-	-	-	S	ko:K06889	-	ko00000	Alpha/beta hydrolase family
CLPCLEEF_02059	1.45e-183	XK27_08125	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
CLPCLEEF_02060	5.5e-155	-	-	-	-	-	-	-	-
CLPCLEEF_02061	9.18e-202	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
CLPCLEEF_02062	3.58e-251	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
CLPCLEEF_02063	2.61e-23	-	-	-	-	-	-	-	-
CLPCLEEF_02064	3.15e-121	-	-	-	S	-	-	-	membrane
CLPCLEEF_02065	5.3e-92	-	-	-	K	-	-	-	LytTr DNA-binding domain
CLPCLEEF_02066	6.93e-34	-	-	-	S	-	-	-	Sugar efflux transporter for intercellular exchange
CLPCLEEF_02067	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
CLPCLEEF_02068	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
CLPCLEEF_02069	2.2e-79	lysM	-	-	M	-	-	-	LysM domain
CLPCLEEF_02070	7.62e-223	-	-	-	-	-	-	-	-
CLPCLEEF_02071	6.74e-212	mdtG2	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
CLPCLEEF_02072	1.27e-58	mdtG2	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
CLPCLEEF_02073	1.86e-114	ymdB	-	-	S	-	-	-	Macro domain protein
CLPCLEEF_02075	3.51e-33	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CLPCLEEF_02077	6.36e-230	yvdE	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
CLPCLEEF_02078	4.24e-46	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
CLPCLEEF_02079	1e-131	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
CLPCLEEF_02080	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CLPCLEEF_02081	3.66e-186	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
CLPCLEEF_02082	1.74e-248	-	-	-	G	-	-	-	Transmembrane secretion effector
CLPCLEEF_02083	5.63e-171	-	-	-	V	-	-	-	ABC transporter transmembrane region
CLPCLEEF_02084	3.65e-285	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
CLPCLEEF_02085	1.83e-91	-	-	-	V	-	-	-	ABC transporter transmembrane region
CLPCLEEF_02086	6.69e-84	-	-	-	L	-	-	-	RelB antitoxin
CLPCLEEF_02087	1.51e-168	cobQ	-	-	S	ko:K07009	-	ko00000	glutamine amidotransferase
CLPCLEEF_02088	8.6e-108	-	-	-	M	-	-	-	NlpC/P60 family
CLPCLEEF_02091	1.02e-200	-	-	-	-	-	-	-	-
CLPCLEEF_02092	1.03e-07	-	-	-	-	-	-	-	-
CLPCLEEF_02093	5.51e-47	-	-	-	-	-	-	-	-
CLPCLEEF_02094	4.48e-206	-	-	-	EG	-	-	-	EamA-like transporter family
CLPCLEEF_02095	3.18e-209	-	-	-	EG	-	-	-	EamA-like transporter family
CLPCLEEF_02096	3.75e-178	yicL	-	-	EG	-	-	-	EamA-like transporter family
CLPCLEEF_02097	1.32e-137	-	-	-	-	-	-	-	-
CLPCLEEF_02098	9.07e-143	-	-	-	-	-	-	-	-
CLPCLEEF_02099	1.84e-238	-	-	-	S	-	-	-	DUF218 domain
CLPCLEEF_02100	0.0	yheS_2	-	-	S	ko:K18231,ko:K19349	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ATPases associated with a variety of cellular activities
CLPCLEEF_02101	6.77e-111	-	-	-	-	-	-	-	-
CLPCLEEF_02102	1.09e-74	-	-	-	-	-	-	-	-
CLPCLEEF_02103	7.26e-35	-	-	-	S	-	-	-	Protein conserved in bacteria
CLPCLEEF_02104	2.27e-71	-	-	-	S	-	-	-	protein encoded in hypervariable junctions of pilus gene clusters
CLPCLEEF_02105	1.01e-38	-	-	-	S	-	-	-	HicA toxin of bacterial toxin-antitoxin,
CLPCLEEF_02106	7.13e-313	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CLPCLEEF_02107	0.0	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CLPCLEEF_02108	1.35e-238	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
CLPCLEEF_02111	1.84e-263	-	4.2.1.126	-	S	ko:K07106,ko:K09963	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Bacterial protein of unknown function (DUF871)
CLPCLEEF_02112	5.12e-242	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
CLPCLEEF_02113	6.45e-291	-	-	-	E	-	-	-	amino acid
CLPCLEEF_02114	6.65e-179	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
CLPCLEEF_02116	1.95e-221	-	-	-	V	-	-	-	HNH endonuclease
CLPCLEEF_02117	6.36e-173	-	-	-	S	-	-	-	PFAM Archaeal ATPase
CLPCLEEF_02118	5.27e-314	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
CLPCLEEF_02119	2.58e-310	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
CLPCLEEF_02120	5.08e-149	sipS3	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
CLPCLEEF_02121	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	AAA domain (Cdc48 subfamily)
CLPCLEEF_02122	7.86e-212	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
CLPCLEEF_02123	4.39e-304	pts13C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CLPCLEEF_02124	1.68e-161	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CLPCLEEF_02125	0.0	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
CLPCLEEF_02126	1.96e-49	-	-	-	-	-	-	-	-
CLPCLEEF_02127	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
CLPCLEEF_02128	1.34e-183	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
CLPCLEEF_02129	2.5e-172	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
CLPCLEEF_02130	1.97e-227	pbpX2	-	-	V	-	-	-	Beta-lactamase
CLPCLEEF_02131	5.44e-315	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CLPCLEEF_02132	4.98e-48	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
CLPCLEEF_02133	2.95e-304	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
CLPCLEEF_02134	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
CLPCLEEF_02135	1.3e-26	-	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
CLPCLEEF_02136	1.42e-58	-	-	-	-	-	-	-	-
CLPCLEEF_02137	5.11e-265	-	-	-	S	-	-	-	Membrane
CLPCLEEF_02138	3.41e-107	ykuL	-	-	S	-	-	-	(CBS) domain
CLPCLEEF_02139	0.0	cadA	-	-	P	-	-	-	P-type ATPase
CLPCLEEF_02140	5.71e-263	napA	-	-	P	-	-	-	Sodium/hydrogen exchanger family
CLPCLEEF_02141	2.49e-63	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
CLPCLEEF_02142	1.68e-55	yoeB	-	-	S	ko:K19158	-	ko00000,ko01000,ko02048	YoeB-like toxin of bacterial type II toxin-antitoxin system
CLPCLEEF_02143	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
CLPCLEEF_02144	1.91e-200	mutR	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CLPCLEEF_02145	1.05e-67	-	-	-	-	-	-	-	-
CLPCLEEF_02146	3.62e-202	-	-	-	EGP	-	-	-	Major facilitator Superfamily
CLPCLEEF_02147	1.49e-141	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Transcriptional regulator
CLPCLEEF_02148	3.43e-155	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
CLPCLEEF_02149	5.14e-248	-	-	-	S	-	-	-	DUF218 domain
CLPCLEEF_02150	0.0	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CLPCLEEF_02151	0.0	ppc	4.1.1.31	-	H	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CLPCLEEF_02152	5.9e-130	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
CLPCLEEF_02153	1.97e-255	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
CLPCLEEF_02154	4.57e-232	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
CLPCLEEF_02155	0.0	mglA	3.6.3.17	-	S	ko:K02056,ko:K06400	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
CLPCLEEF_02156	8.8e-262	mglC	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
CLPCLEEF_02157	2.1e-220	yufQ	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
CLPCLEEF_02158	3.08e-205	-	-	-	S	-	-	-	Aldo/keto reductase family
CLPCLEEF_02159	1.15e-173	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
CLPCLEEF_02160	9.85e-154	dak	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
CLPCLEEF_02161	1.06e-159	dgk2	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
CLPCLEEF_02162	6.64e-94	-	-	-	-	-	-	-	-
CLPCLEEF_02163	2.56e-179	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
CLPCLEEF_02164	9.69e-292	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
CLPCLEEF_02165	3.85e-97	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
CLPCLEEF_02166	7.05e-76	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
CLPCLEEF_02167	5.92e-90	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
CLPCLEEF_02168	1.64e-45	-	-	-	-	-	-	-	-
CLPCLEEF_02169	3.31e-154	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
CLPCLEEF_02170	3.82e-294	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
CLPCLEEF_02171	3.58e-61	-	-	-	S	ko:K07124	-	ko00000	Enoyl-(Acyl carrier protein) reductase
CLPCLEEF_02173	4.06e-108	yneE	-	-	K	-	-	-	Transcriptional regulator
CLPCLEEF_02174	1.92e-80	yneE	-	-	K	-	-	-	Transcriptional regulator
CLPCLEEF_02175	4.48e-104	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
CLPCLEEF_02176	1.41e-170	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
CLPCLEEF_02177	8.73e-187	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
CLPCLEEF_02178	1.28e-292	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
CLPCLEEF_02179	7.23e-50	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
CLPCLEEF_02180	3.61e-212	-	-	-	V	-	-	-	ABC transporter transmembrane region
CLPCLEEF_02181	1.26e-176	-	-	-	-	-	-	-	-
CLPCLEEF_02185	2.23e-48	-	-	-	-	-	-	-	-
CLPCLEEF_02186	5.94e-75	-	-	-	S	-	-	-	Cupredoxin-like domain
CLPCLEEF_02187	3.27e-58	-	-	-	S	-	-	-	Cupredoxin-like domain
CLPCLEEF_02188	0.0	copA	3.6.3.3, 3.6.3.5, 3.6.3.54	-	P	ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
CLPCLEEF_02189	6.63e-147	crp2	-	-	K	ko:K10914,ko:K21562	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	helix_turn_helix, cAMP Regulatory protein
CLPCLEEF_02190	2.36e-47	-	-	-	-	-	-	-	-
CLPCLEEF_02191	7.03e-65	-	-	-	-	-	-	-	-
CLPCLEEF_02192	1.83e-316	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
CLPCLEEF_02193	6.46e-27	-	-	-	-	-	-	-	-
CLPCLEEF_02194	3.91e-269	-	-	-	-	-	-	-	-
CLPCLEEF_02195	6.57e-175	-	-	-	S	-	-	-	SLAP domain
CLPCLEEF_02196	1.14e-154	-	-	-	S	-	-	-	SLAP domain
CLPCLEEF_02197	4.54e-135	-	-	-	S	-	-	-	Bacteriocin helveticin-J
CLPCLEEF_02198	2.35e-58	-	-	-	-	-	-	-	-
CLPCLEEF_02199	8.29e-76	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CLPCLEEF_02200	1.31e-39	-	-	-	E	-	-	-	Zn peptidase
CLPCLEEF_02201	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
CLPCLEEF_02202	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CLPCLEEF_02203	5.38e-39	-	-	-	-	-	-	-	-
CLPCLEEF_02204	0.0	pox1	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
CLPCLEEF_02205	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
CLPCLEEF_02206	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
CLPCLEEF_02207	5.58e-191	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
CLPCLEEF_02208	1.87e-81	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
CLPCLEEF_02209	3.26e-23	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
CLPCLEEF_02210	1.92e-315	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CLPCLEEF_02211	1.05e-240	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
CLPCLEEF_02212	1.13e-48	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain protein YaaA
CLPCLEEF_02213	5.14e-268	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CLPCLEEF_02214	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CLPCLEEF_02215	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CLPCLEEF_02216	1.93e-65	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
CLPCLEEF_02217	7.46e-108	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
CLPCLEEF_02218	1.89e-47	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CLPCLEEF_02219	1.18e-95	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	domain protein
CLPCLEEF_02221	5.89e-316	ade	3.5.4.2	-	F	ko:K01486	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	Adenine deaminase C-terminal domain
CLPCLEEF_02222	1.22e-195	-	-	-	P	ko:K02055	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
CLPCLEEF_02223	4.48e-174	potA11	3.6.3.30	-	P	ko:K02010,ko:K02052	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
CLPCLEEF_02224	7.05e-146	potC3	-	-	E	ko:K02053	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CLPCLEEF_02225	1.39e-143	adh2	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
CLPCLEEF_02229	3.24e-13	-	-	-	S	-	-	-	SLAP domain
CLPCLEEF_02230	0.0	-	-	-	M	-	-	-	Rib/alpha-like repeat
CLPCLEEF_02231	0.0	malA1	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain
CLPCLEEF_02232	0.0	nplT	3.2.1.133, 3.2.1.135, 3.2.1.54	GH13	G	ko:K01208	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
CLPCLEEF_02233	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
CLPCLEEF_02234	7.7e-149	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
CLPCLEEF_02235	2.85e-266	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
CLPCLEEF_02236	2.73e-282	-	-	-	G	ko:K15770	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
CLPCLEEF_02237	0.0	malF	-	-	P	ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
CLPCLEEF_02238	1.39e-197	malG	-	-	P	ko:K15772	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
CLPCLEEF_02239	4.73e-84	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
CLPCLEEF_02242	1.44e-161	-	-	-	S	-	-	-	interspecies interaction between organisms
CLPCLEEF_02243	1.28e-09	-	-	-	S	-	-	-	PFAM HicB family
CLPCLEEF_02244	2.86e-13	-	-	-	K	ko:K15773	-	ko00000,ko02048,ko03000	peptidyl-tyrosine sulfation
CLPCLEEF_02245	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
CLPCLEEF_02246	1.57e-84	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
CLPCLEEF_02247	2.65e-154	nanA	4.1.3.3	-	EM	ko:K01639	ko00520,map00520	ko00000,ko00001,ko01000	Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
CLPCLEEF_02248	1.03e-112	nanK	-	-	GK	-	-	-	ROK family
CLPCLEEF_02249	3.74e-70	-	-	-	G	-	-	-	Xylose isomerase domain protein TIM barrel
CLPCLEEF_02250	1.48e-166	napA	-	-	P	-	-	-	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
CLPCLEEF_02251	6.48e-279	-	-	-	E	ko:K03307	-	ko00000	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CLPCLEEF_02252	1.4e-74	cah	3.1.1.41	-	Q	ko:K01060	ko00311,ko01130,map00311,map01130	ko00000,ko00001,ko01000	Acetyl xylan esterase (AXE1)
CLPCLEEF_02253	4.42e-45	cah	3.1.1.41	-	Q	ko:K01060	ko00311,ko01130,map00311,map01130	ko00000,ko00001,ko01000	Acetyl xylan esterase (AXE1)
CLPCLEEF_02254	6.9e-141	nanE	5.1.3.9	-	G	ko:K01788	ko00520,map00520	ko00000,ko00001,ko01000	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
CLPCLEEF_02255	2.58e-13	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CLPCLEEF_02256	1.59e-108	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CLPCLEEF_02257	0.0	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
CLPCLEEF_02259	1.79e-288	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CLPCLEEF_02260	4.43e-179	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	FeS assembly ATPase SufC
CLPCLEEF_02261	6.22e-232	sufD	-	-	O	ko:K07033,ko:K09015	-	ko00000	FeS assembly protein SufD
CLPCLEEF_02262	1.39e-224	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CLPCLEEF_02263	6.98e-78	nifU	-	-	C	ko:K04488	-	ko00000	SUF system FeS assembly protein, NifU family
CLPCLEEF_02264	0.0	sufB	-	-	O	ko:K07033,ko:K09014	-	ko00000	assembly protein SufB
CLPCLEEF_02265	1.64e-59	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
CLPCLEEF_02266	1.27e-311	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
CLPCLEEF_02267	6.33e-221	ulaG	-	-	S	ko:K03476	ko00053,ko01100,ko01120,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Beta-lactamase superfamily domain
CLPCLEEF_02268	4.93e-80	-	2.7.1.194	-	G	ko:K02821	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CLPCLEEF_02269	6.58e-293	sgaT	-	-	S	ko:K03475	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
CLPCLEEF_02270	4.82e-42	ulaB	2.7.1.194	-	G	ko:K02822	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
CLPCLEEF_02271	2.85e-115	ulaD	4.1.1.85, 4.1.2.43	-	G	ko:K03078,ko:K08093	ko00030,ko00040,ko00053,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00040,map00053,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Orotidine 5'-phosphate decarboxylase / HUMPS family
CLPCLEEF_02272	1.78e-163	sga	5.1.3.22	-	G	ko:K03079	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Xylose isomerase-like TIM barrel
CLPCLEEF_02273	1.52e-157	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
CLPCLEEF_02274	5.85e-86	nt5e	3.1.3.18	-	L	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	haloacid dehalogenase-like hydrolase
CLPCLEEF_02275	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
CLPCLEEF_02276	1.01e-22	-	-	-	L	-	-	-	Transposase
CLPCLEEF_02277	7.51e-16	-	-	-	L	-	-	-	Transposase
CLPCLEEF_02278	1.07e-17	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
CLPCLEEF_02279	4.28e-121	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
CLPCLEEF_02280	2.5e-136	fabK	1.3.1.9	-	S	ko:K02371	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Nitronate monooxygenase
CLPCLEEF_02281	8.45e-102	pct	2.8.3.1	-	I	ko:K01026	ko00620,ko00640,ko00643,ko01100,ko01120,map00620,map00640,map00643,map01100,map01120	ko00000,ko00001,ko01000	Coenzyme A transferase
CLPCLEEF_02282	4.12e-205	pct	2.8.3.1	-	I	ko:K01026	ko00620,ko00640,ko00643,ko01100,ko01120,map00620,map00640,map00643,map01100,map01120	ko00000,ko00001,ko01000	Coenzyme A transferase
CLPCLEEF_02283	5.38e-184	-	-	-	K	-	-	-	LysR substrate binding domain
CLPCLEEF_02284	1.47e-70	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CLPCLEEF_02285	1.41e-97	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
CLPCLEEF_02286	3.28e-101	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
CLPCLEEF_02287	1.29e-41	-	-	-	O	-	-	-	OsmC-like protein
CLPCLEEF_02289	1.33e-44	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
CLPCLEEF_02290	3.98e-97	-	-	-	M	-	-	-	LysM domain
CLPCLEEF_02291	3.3e-42	-	-	-	-	-	-	-	-
CLPCLEEF_02294	2.58e-45	-	-	-	-	-	-	-	-
CLPCLEEF_02295	7.84e-95	-	-	-	EGP	-	-	-	Major Facilitator
CLPCLEEF_02296	9.16e-301	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
CLPCLEEF_02297	1.48e-139	-	-	-	EGP	-	-	-	Major Facilitator
CLPCLEEF_02298	1.08e-161	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
CLPCLEEF_02299	1.23e-54	-	-	-	V	ko:K20345	ko02024,map02024	ko00000,ko00001,ko02000	HlyD family secretion protein
CLPCLEEF_02300	0.0	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
CLPCLEEF_02301	1.64e-101	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
CLPCLEEF_02302	1.79e-99	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
CLPCLEEF_02303	1.23e-154	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
CLPCLEEF_02304	7.13e-67	-	-	-	K	-	-	-	helix_turn_helix gluconate operon transcriptional repressor
CLPCLEEF_02305	1.53e-189	-	5.2.1.13	-	Q	ko:K09835	ko00906,ko01100,ko01110,map00906,map01100,map01110	ko00000,ko00001,ko00002,ko01000	HI0933-like protein
CLPCLEEF_02306	3.43e-79	-	-	-	C	-	-	-	2Fe-2S iron-sulfur cluster binding domain
CLPCLEEF_02307	9.07e-51	-	-	-	S	-	-	-	CRISPR-associated protein (Cas_Csn2)
CLPCLEEF_02308	4.67e-54	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
CLPCLEEF_02309	1.44e-164	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
CLPCLEEF_02310	2.47e-104	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
CLPCLEEF_02311	1.5e-93	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
CLPCLEEF_02312	7.88e-59	-	-	-	L	-	-	-	Transposase, IS116 IS110 IS902 family
CLPCLEEF_02313	2.48e-147	aapA	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
CLPCLEEF_02314	4.63e-32	-	-	-	-	-	-	-	-
CLPCLEEF_02315	6.72e-177	-	-	-	EP	-	-	-	Plasmid replication protein
CLPCLEEF_02316	1.93e-100	-	-	-	S	-	-	-	helix_turn_helix, Deoxyribose operon repressor
CLPCLEEF_02318	3.68e-176	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CLPCLEEF_02319	3.05e-110	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin synthase
CLPCLEEF_02320	1.45e-133	-	-	-	-	-	-	-	-
CLPCLEEF_02322	1.28e-168	-	-	-	L	-	-	-	PFAM transposase IS116 IS110 IS902
CLPCLEEF_02323	6.59e-296	-	-	-	L	-	-	-	Transposase DDE domain
CLPCLEEF_02324	0.0	-	-	-	L	-	-	-	Transposase DDE domain
CLPCLEEF_02325	1.08e-229	-	-	-	L	-	-	-	DDE superfamily endonuclease
CLPCLEEF_02326	2.14e-103	-	-	-	-	-	-	-	-
CLPCLEEF_02327	2.24e-71	ykoJ	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
CLPCLEEF_02328	8.41e-42	adh2	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
CLPCLEEF_02329	9.13e-157	-	-	-	L	-	-	-	PFAM transposase IS116 IS110 IS902
CLPCLEEF_02332	4.4e-86	-	-	-	K	-	-	-	LytTr DNA-binding domain
CLPCLEEF_02333	6.11e-66	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
CLPCLEEF_02334	2.09e-105	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family