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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
JAFFGJDM_00001	9.14e-317	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
JAFFGJDM_00002	8.11e-245	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
JAFFGJDM_00003	1.13e-48	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain protein YaaA
JAFFGJDM_00004	4.22e-267	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JAFFGJDM_00005	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JAFFGJDM_00006	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JAFFGJDM_00007	6.72e-66	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
JAFFGJDM_00008	4.83e-104	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
JAFFGJDM_00009	1.89e-47	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
JAFFGJDM_00010	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
JAFFGJDM_00011	3.87e-97	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
JAFFGJDM_00012	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
JAFFGJDM_00013	5.56e-217	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, phosphonate, periplasmic substrate-binding protein
JAFFGJDM_00014	2.26e-215	degV1	-	-	S	-	-	-	DegV family
JAFFGJDM_00015	1.23e-170	-	-	-	V	-	-	-	ABC transporter transmembrane region
JAFFGJDM_00016	4.76e-213	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
JAFFGJDM_00017	3.81e-18	-	-	-	S	-	-	-	CsbD-like
JAFFGJDM_00018	2.26e-31	-	-	-	S	-	-	-	Transglycosylase associated protein
JAFFGJDM_00019	1.37e-287	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
JAFFGJDM_00020	3.92e-153	-	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
JAFFGJDM_00024	4.47e-148	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
JAFFGJDM_00025	7.7e-126	-	-	-	L	-	-	-	Helix-turn-helix domain
JAFFGJDM_00026	2.41e-39	-	-	-	-	-	-	-	-
JAFFGJDM_00029	4.82e-144	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
JAFFGJDM_00030	1.25e-94	-	-	-	K	-	-	-	Helix-turn-helix domain
JAFFGJDM_00032	6.66e-27	-	-	-	S	-	-	-	CAAX protease self-immunity
JAFFGJDM_00033	2.67e-35	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
JAFFGJDM_00035	4.11e-124	potE	-	-	E	-	-	-	thought to be involved in transport amino acids across the membrane
JAFFGJDM_00037	2.23e-189	-	-	-	S	-	-	-	Putative ABC-transporter type IV
JAFFGJDM_00038	5.61e-38	-	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
JAFFGJDM_00039	1.71e-128	-	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
JAFFGJDM_00040	1.09e-148	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
JAFFGJDM_00041	3.26e-292	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
JAFFGJDM_00042	4.65e-120	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
JAFFGJDM_00043	8.87e-226	ydbI	-	-	K	-	-	-	AI-2E family transporter
JAFFGJDM_00044	3.93e-134	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
JAFFGJDM_00045	2.55e-26	-	-	-	-	-	-	-	-
JAFFGJDM_00046	1.59e-315	-	-	-	G	ko:K16211	-	ko00000,ko02000	Major Facilitator
JAFFGJDM_00047	8.64e-176	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
JAFFGJDM_00048	4.76e-168	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
JAFFGJDM_00049	3.35e-223	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
JAFFGJDM_00050	7.75e-170	ysaA	3.1.3.5, 3.8.1.2	-	S	ko:K01560,ko:K07025,ko:K08723	ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
JAFFGJDM_00051	4.17e-201	-	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
JAFFGJDM_00052	5.74e-206	yvgN	-	-	C	-	-	-	Aldo keto reductase
JAFFGJDM_00053	0.0	fusA1	-	-	J	-	-	-	elongation factor G
JAFFGJDM_00054	3.16e-192	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	haloacid dehalogenase-like hydrolase
JAFFGJDM_00055	1.07e-179	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
JAFFGJDM_00056	9.62e-247	ldhA	1.1.1.28	-	C	ko:K03778,ko:K18347	ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01504	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JAFFGJDM_00057	1.44e-07	-	-	-	S	-	-	-	YSIRK type signal peptide
JAFFGJDM_00060	5.73e-201	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
JAFFGJDM_00061	0.0	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
JAFFGJDM_00062	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
JAFFGJDM_00063	1.36e-260	pbpX	-	-	V	-	-	-	Beta-lactamase
JAFFGJDM_00064	1.05e-289	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
JAFFGJDM_00065	4.19e-92	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
JAFFGJDM_00067	1.61e-48	-	-	-	S	-	-	-	Cytochrome B5
JAFFGJDM_00068	1.87e-213	arbZ	-	-	I	-	-	-	Phosphate acyltransferases
JAFFGJDM_00069	5.48e-235	-	-	-	M	-	-	-	Glycosyl transferase family 8
JAFFGJDM_00070	1.91e-236	-	-	-	M	-	-	-	Glycosyl transferase family 8
JAFFGJDM_00071	7.23e-201	arbx	-	-	M	-	-	-	Glycosyl transferase family 8
JAFFGJDM_00072	4.19e-192	-	-	-	I	-	-	-	Acyl-transferase
JAFFGJDM_00074	1.09e-46	-	-	-	-	-	-	-	-
JAFFGJDM_00076	3.98e-169	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
JAFFGJDM_00077	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
JAFFGJDM_00078	0.0	yycH	-	-	S	-	-	-	YycH protein
JAFFGJDM_00079	7.44e-192	yycI	-	-	S	-	-	-	YycH protein
JAFFGJDM_00080	1.19e-188	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
JAFFGJDM_00081	3.17e-224	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
JAFFGJDM_00082	8.64e-107	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
JAFFGJDM_00083	1.93e-32	-	-	-	G	-	-	-	Peptidase_C39 like family
JAFFGJDM_00084	2.16e-207	-	-	-	M	-	-	-	NlpC/P60 family
JAFFGJDM_00085	6.67e-115	-	-	-	G	-	-	-	Peptidase_C39 like family
JAFFGJDM_00086	1.09e-223	pepI	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
JAFFGJDM_00087	1.19e-114	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
JAFFGJDM_00088	0.0	-	-	-	S	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
JAFFGJDM_00089	1.05e-222	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
JAFFGJDM_00090	3.86e-206	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
JAFFGJDM_00091	1.43e-125	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
JAFFGJDM_00092	7.23e-244	ysdE	-	-	P	-	-	-	Citrate transporter
JAFFGJDM_00093	3.34e-92	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
JAFFGJDM_00094	0.0	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
JAFFGJDM_00095	9.69e-25	-	-	-	-	-	-	-	-
JAFFGJDM_00096	1.34e-09	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
JAFFGJDM_00097	4.75e-239	-	-	-	M	-	-	-	Glycosyl transferase
JAFFGJDM_00098	3.67e-225	-	-	-	G	-	-	-	Glycosyl hydrolases family 8
JAFFGJDM_00099	1.11e-154	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
JAFFGJDM_00100	2.42e-204	-	-	-	L	-	-	-	HNH nucleases
JAFFGJDM_00101	1.4e-191	yhaH	-	-	S	-	-	-	Protein of unknown function (DUF805)
JAFFGJDM_00102	2.89e-173	glnQ	-	-	E	ko:K17076	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
JAFFGJDM_00103	0.0	XK27_05795	-	-	P	ko:K17073,ko:K17074	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
JAFFGJDM_00104	4.04e-155	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
JAFFGJDM_00105	7.63e-85	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
JAFFGJDM_00106	1.14e-164	terC	-	-	P	-	-	-	Integral membrane protein TerC family
JAFFGJDM_00107	1.25e-119	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	6-O-methylguanine DNA methyltransferase, DNA binding domain
JAFFGJDM_00108	1.02e-168	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
JAFFGJDM_00109	2.29e-112	-	-	-	-	-	-	-	-
JAFFGJDM_00110	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JAFFGJDM_00111	1.24e-232	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
JAFFGJDM_00112	5.07e-190	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JAFFGJDM_00113	9.18e-187	-	-	-	S	-	-	-	Protein of unknown function (DUF1002)
JAFFGJDM_00114	2.62e-199	epsV	-	-	S	-	-	-	glycosyl transferase family 2
JAFFGJDM_00115	4.35e-163	-	-	-	S	-	-	-	Alpha/beta hydrolase family
JAFFGJDM_00116	2.32e-47	-	-	-	-	-	-	-	-
JAFFGJDM_00117	1.76e-233	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JAFFGJDM_00118	8.37e-161	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
JAFFGJDM_00119	1.11e-177	-	-	-	-	-	-	-	-
JAFFGJDM_00120	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
JAFFGJDM_00121	5.85e-170	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
JAFFGJDM_00122	7.36e-291	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
JAFFGJDM_00123	2.43e-263	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
JAFFGJDM_00124	8.18e-163	-	-	-	-	-	-	-	-
JAFFGJDM_00125	1.69e-258	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
JAFFGJDM_00126	7.8e-167	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
JAFFGJDM_00127	1.63e-200	-	-	-	I	-	-	-	alpha/beta hydrolase fold
JAFFGJDM_00128	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 31 family
JAFFGJDM_00129	8.82e-277	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
JAFFGJDM_00130	1.62e-105	yveB	-	-	I	-	-	-	PAP2 superfamily
JAFFGJDM_00131	0.0	-	-	-	S	ko:K06921	-	ko00000	Archaea bacterial proteins of unknown function
JAFFGJDM_00133	4.83e-117	ntd	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside
JAFFGJDM_00134	3.77e-113	-	2.7.1.200, 2.7.1.204	-	G	ko:K02773,ko:K20112	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JAFFGJDM_00135	1.24e-191	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
JAFFGJDM_00136	9.29e-111	usp5	-	-	T	-	-	-	universal stress protein
JAFFGJDM_00137	2.58e-203	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphonate ABC transporter
JAFFGJDM_00138	6.8e-175	phnC	3.6.3.28	-	P	ko:K02041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
JAFFGJDM_00139	1.02e-154	phnB	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
JAFFGJDM_00140	1.83e-190	-	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
JAFFGJDM_00141	6.82e-139	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
JAFFGJDM_00142	5.18e-109	-	-	-	-	-	-	-	-
JAFFGJDM_00143	0.0	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
JAFFGJDM_00144	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
JAFFGJDM_00145	0.0	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
JAFFGJDM_00146	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Ribonucleoside-triphosphate reductase
JAFFGJDM_00147	1.35e-180	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JAFFGJDM_00148	3.41e-132	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
JAFFGJDM_00149	2.19e-292	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
JAFFGJDM_00150	2.31e-277	yqjV	-	-	EGP	-	-	-	Major Facilitator Superfamily
JAFFGJDM_00151	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
JAFFGJDM_00152	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
JAFFGJDM_00153	6.55e-97	-	-	-	-	-	-	-	-
JAFFGJDM_00154	3.75e-48	-	-	-	S	-	-	-	PFAM Archaeal ATPase
JAFFGJDM_00156	4.53e-76	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
JAFFGJDM_00157	3.61e-60	-	-	-	-	-	-	-	-
JAFFGJDM_00158	2.77e-25	-	-	-	-	-	-	-	-
JAFFGJDM_00159	1.21e-40	-	-	-	-	-	-	-	-
JAFFGJDM_00160	1.05e-54	-	-	-	S	-	-	-	Protein of unknown function (DUF2922)
JAFFGJDM_00161	6.62e-161	-	-	-	S	-	-	-	SLAP domain
JAFFGJDM_00163	2.85e-54	-	-	-	-	-	-	-	-
JAFFGJDM_00164	3.6e-101	-	-	-	K	-	-	-	DNA-templated transcription, initiation
JAFFGJDM_00166	4.56e-191	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
JAFFGJDM_00168	6.35e-28	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
JAFFGJDM_00169	8.38e-140	-	-	-	S	-	-	-	SLAP domain
JAFFGJDM_00171	2.09e-286	-	-	-	NU	-	-	-	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
JAFFGJDM_00172	7.32e-232	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
JAFFGJDM_00173	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
JAFFGJDM_00174	2.47e-138	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
JAFFGJDM_00175	1.68e-207	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
JAFFGJDM_00176	1.98e-168	-	-	-	-	-	-	-	-
JAFFGJDM_00177	1.72e-149	-	-	-	-	-	-	-	-
JAFFGJDM_00178	4.51e-171	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
JAFFGJDM_00179	5.18e-128	-	-	-	G	-	-	-	Aldose 1-epimerase
JAFFGJDM_00180	2.92e-258	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
JAFFGJDM_00181	1.03e-145	plsY1	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
JAFFGJDM_00182	0.0	XK27_08315	-	-	M	-	-	-	Sulfatase
JAFFGJDM_00183	0.0	-	-	-	S	-	-	-	Fibronectin type III domain
JAFFGJDM_00184	7.03e-307	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
JAFFGJDM_00186	0.0	pepC2	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
JAFFGJDM_00187	1.77e-157	ypgQ	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
JAFFGJDM_00188	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
JAFFGJDM_00189	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
JAFFGJDM_00190	2.64e-266	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
JAFFGJDM_00191	1.34e-191	oppB	-	-	P	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JAFFGJDM_00192	7.82e-240	oppC	-	-	EP	ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JAFFGJDM_00193	7.1e-252	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
JAFFGJDM_00194	6.54e-222	oppF	-	-	P	ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
JAFFGJDM_00195	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
JAFFGJDM_00196	3.4e-93	hsp	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
JAFFGJDM_00197	8.08e-100	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
JAFFGJDM_00198	1.17e-143	-	-	-	-	-	-	-	-
JAFFGJDM_00200	7.04e-145	-	-	-	E	-	-	-	Belongs to the SOS response-associated peptidase family
JAFFGJDM_00201	4.07e-245	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
JAFFGJDM_00202	1.5e-116	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	MafB19-like deaminase
JAFFGJDM_00203	4.57e-135	-	-	-	S	ko:K06872	-	ko00000	TPM domain
JAFFGJDM_00204	1.71e-173	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
JAFFGJDM_00205	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
JAFFGJDM_00206	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JAFFGJDM_00207	2.72e-189	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
JAFFGJDM_00208	5.17e-129	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
JAFFGJDM_00209	8.93e-194	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
JAFFGJDM_00210	9.99e-53	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
JAFFGJDM_00211	2.05e-190	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
JAFFGJDM_00212	1.81e-307	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JAFFGJDM_00213	5.52e-113	-	-	-	-	-	-	-	-
JAFFGJDM_00214	0.0	-	-	-	S	-	-	-	SLAP domain
JAFFGJDM_00215	5.4e-226	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JAFFGJDM_00216	1.37e-219	-	-	-	GK	-	-	-	ROK family
JAFFGJDM_00217	1.03e-55	-	-	-	-	-	-	-	-
JAFFGJDM_00218	0.0	-	-	-	S	ko:K06885	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
JAFFGJDM_00219	1.75e-89	-	-	-	S	-	-	-	Domain of unknown function (DUF1934)
JAFFGJDM_00220	2.83e-90	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
JAFFGJDM_00221	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
JAFFGJDM_00222	1.89e-312	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JAFFGJDM_00223	7.28e-97	-	-	-	K	-	-	-	acetyltransferase
JAFFGJDM_00224	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
JAFFGJDM_00225	2.07e-196	msmR	-	-	K	-	-	-	AraC-like ligand binding domain
JAFFGJDM_00226	7.15e-295	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
JAFFGJDM_00227	9.63e-136	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
JAFFGJDM_00228	1.1e-54	-	-	-	K	-	-	-	Helix-turn-helix
JAFFGJDM_00229	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
JAFFGJDM_00230	7.01e-207	-	2.1.1.72	-	L	ko:K07316	-	ko00000,ko01000,ko02048	DNA methylase
JAFFGJDM_00231	3.06e-307	sthIR	3.1.21.5	-	L	ko:K01156	-	ko00000,ko01000,ko02048	Type III restriction enzyme, res subunit
JAFFGJDM_00232	2.13e-53	-	-	-	-	-	-	-	-
JAFFGJDM_00234	5.2e-119	-	-	-	D	-	-	-	ftsk spoiiie
JAFFGJDM_00236	5.45e-72	-	-	-	-	-	-	-	-
JAFFGJDM_00237	5.22e-18	-	-	-	S	-	-	-	Domain of unknown function (DUF3173)
JAFFGJDM_00238	6.03e-215	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
JAFFGJDM_00239	4e-79	-	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
JAFFGJDM_00241	7.68e-129	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
JAFFGJDM_00242	3.64e-309	-	-	-	M	-	-	-	Rib/alpha-like repeat
JAFFGJDM_00244	3.87e-64	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
JAFFGJDM_00246	2.86e-169	-	-	-	L	-	-	-	Transposase and inactivated derivatives
JAFFGJDM_00247	3.74e-125	-	-	-	-	-	-	-	-
JAFFGJDM_00248	3.94e-183	-	-	-	P	-	-	-	Voltage gated chloride channel
JAFFGJDM_00249	2.83e-237	-	-	-	C	-	-	-	FMN-dependent dehydrogenase
JAFFGJDM_00250	1.05e-69	-	-	-	-	-	-	-	-
JAFFGJDM_00251	1.17e-56	-	-	-	-	-	-	-	-
JAFFGJDM_00252	1.33e-295	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
JAFFGJDM_00253	0.0	-	-	-	E	-	-	-	amino acid
JAFFGJDM_00254	1.64e-200	yhaX	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
JAFFGJDM_00255	0.0	dexB	3.2.1.70	-	G	ko:K01215	-	ko00000,ko01000	Alpha amylase, catalytic domain protein
JAFFGJDM_00256	1.07e-52	rpmE	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
JAFFGJDM_00257	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
JAFFGJDM_00258	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
JAFFGJDM_00259	9.39e-80	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
JAFFGJDM_00260	1.62e-276	alr	5.1.1.1, 5.1.1.5	-	E	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JAFFGJDM_00261	1.23e-166	-	-	-	S	-	-	-	(CBS) domain
JAFFGJDM_00262	2.93e-234	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
JAFFGJDM_00263	1.89e-134	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
JAFFGJDM_00264	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JAFFGJDM_00265	6.06e-54	yabO	-	-	J	-	-	-	S4 domain protein
JAFFGJDM_00266	7.52e-78	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
JAFFGJDM_00267	1.61e-81	-	-	-	J	ko:K07571	-	ko00000	S1 RNA binding domain
JAFFGJDM_00268	2.75e-307	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
JAFFGJDM_00269	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JAFFGJDM_00270	3.91e-214	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
JAFFGJDM_00271	2.77e-248	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JAFFGJDM_00272	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
JAFFGJDM_00273	2.84e-108	-	-	-	K	-	-	-	FR47-like protein
JAFFGJDM_00278	4.19e-92	ytsP	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
JAFFGJDM_00279	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
JAFFGJDM_00280	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JAFFGJDM_00281	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JAFFGJDM_00282	7.71e-157	comC	3.4.23.43	-	NOU	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	Bacterial Peptidase A24 N-terminal domain
JAFFGJDM_00283	1.47e-91	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
JAFFGJDM_00284	1.39e-106	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
JAFFGJDM_00285	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JAFFGJDM_00286	6.34e-66	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
JAFFGJDM_00287	6.64e-146	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
JAFFGJDM_00288	1.91e-137	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
JAFFGJDM_00289	1.14e-63	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
JAFFGJDM_00290	3.3e-197	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
JAFFGJDM_00291	1.14e-62	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
JAFFGJDM_00292	9.07e-73	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
JAFFGJDM_00293	8.7e-157	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
JAFFGJDM_00294	1.66e-100	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
JAFFGJDM_00295	1.45e-34	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
JAFFGJDM_00296	1.56e-55	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
JAFFGJDM_00297	3.62e-79	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
JAFFGJDM_00298	3.03e-44	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
JAFFGJDM_00299	1.23e-123	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
JAFFGJDM_00300	1e-39	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
JAFFGJDM_00301	7.94e-90	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
JAFFGJDM_00302	7.18e-121	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
JAFFGJDM_00303	4.84e-73	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
JAFFGJDM_00304	3.73e-110	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
JAFFGJDM_00305	2.22e-34	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
JAFFGJDM_00306	4.95e-93	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
JAFFGJDM_00307	1.2e-299	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
JAFFGJDM_00308	1.51e-154	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
JAFFGJDM_00309	3.13e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
JAFFGJDM_00310	1.89e-21	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
JAFFGJDM_00311	2.07e-73	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
JAFFGJDM_00312	3.82e-82	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
JAFFGJDM_00313	3.62e-218	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JAFFGJDM_00314	2.23e-80	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
JAFFGJDM_00315	5.91e-198	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JAFFGJDM_00316	1.58e-201	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JAFFGJDM_00317	1.53e-175	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JAFFGJDM_00318	5.08e-193	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
JAFFGJDM_00319	5.35e-102	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
JAFFGJDM_00320	3.94e-85	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
JAFFGJDM_00321	1.93e-138	-	-	-	L	-	-	-	Phage integrase family
JAFFGJDM_00322	4.47e-81	-	-	-	L	-	-	-	Phage integrase family
JAFFGJDM_00324	4.4e-86	-	-	-	K	-	-	-	LytTr DNA-binding domain
JAFFGJDM_00325	6.11e-66	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
JAFFGJDM_00326	2.64e-134	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
JAFFGJDM_00327	1.56e-152	-	3.8.1.2	-	S	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
JAFFGJDM_00328	1.49e-171	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
JAFFGJDM_00329	1.56e-160	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
JAFFGJDM_00330	1.46e-206	-	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
JAFFGJDM_00331	2.42e-33	-	-	-	-	-	-	-	-
JAFFGJDM_00332	8.07e-163	gpmA1	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
JAFFGJDM_00333	5.69e-235	-	-	-	S	-	-	-	AAA domain
JAFFGJDM_00334	8.69e-66	-	-	-	-	-	-	-	-
JAFFGJDM_00335	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
JAFFGJDM_00336	1.11e-69	-	-	-	-	-	-	-	-
JAFFGJDM_00337	5.22e-131	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
JAFFGJDM_00338	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
JAFFGJDM_00339	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JAFFGJDM_00340	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
JAFFGJDM_00341	2.45e-98	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
JAFFGJDM_00342	2.69e-178	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JAFFGJDM_00343	1.55e-122	comX	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	Belongs to the sigma-70 factor family
JAFFGJDM_00344	1.19e-45	-	-	-	-	-	-	-	-
JAFFGJDM_00345	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
JAFFGJDM_00346	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
JAFFGJDM_00347	3.73e-33	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
JAFFGJDM_00348	5e-130	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
JAFFGJDM_00349	2.69e-90	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
JAFFGJDM_00350	1.05e-160	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
JAFFGJDM_00351	5.48e-201	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
JAFFGJDM_00352	1.13e-210	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
JAFFGJDM_00353	3.52e-196	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
JAFFGJDM_00354	5.24e-187	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
JAFFGJDM_00355	3.83e-178	pstB1	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
JAFFGJDM_00356	2.89e-151	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
JAFFGJDM_00357	7.66e-116	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
JAFFGJDM_00359	3.72e-111	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
JAFFGJDM_00360	1.61e-72	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
JAFFGJDM_00361	9.32e-189	-	2.1.1.172	-	J	ko:K00564,ko:K10716	-	ko00000,ko01000,ko02000,ko03009	Ion channel
JAFFGJDM_00362	5.31e-149	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
JAFFGJDM_00363	6.15e-36	-	-	-	-	-	-	-	-
JAFFGJDM_00364	1.08e-117	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
JAFFGJDM_00365	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JAFFGJDM_00366	1.12e-136	-	-	-	M	-	-	-	family 8
JAFFGJDM_00367	1.15e-47	-	-	-	M	-	-	-	lipopolysaccharide 3-alpha-galactosyltransferase activity
JAFFGJDM_00368	6.31e-68	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
JAFFGJDM_00369	9.21e-142	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
JAFFGJDM_00370	1.18e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2508)
JAFFGJDM_00371	1.15e-146	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
JAFFGJDM_00372	1.58e-70	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
JAFFGJDM_00373	8.4e-199	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
JAFFGJDM_00374	1.4e-80	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
JAFFGJDM_00375	3.05e-200	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JAFFGJDM_00376	4.27e-167	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
JAFFGJDM_00377	8.72e-111	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
JAFFGJDM_00378	3.69e-171	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
JAFFGJDM_00379	3.93e-125	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
JAFFGJDM_00380	1.94e-247	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
JAFFGJDM_00381	1.28e-311	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
JAFFGJDM_00382	5.51e-46	-	-	-	S	-	-	-	Transposase C of IS166 homeodomain
JAFFGJDM_00383	4.01e-84	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
JAFFGJDM_00384	9.48e-31	-	-	-	-	-	-	-	-
JAFFGJDM_00385	6.8e-52	bbsF_1	2.8.3.19	-	C	ko:K18702	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
JAFFGJDM_00386	6.43e-230	frc	2.8.3.16	-	C	ko:K07749	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
JAFFGJDM_00387	0.0	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
JAFFGJDM_00388	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
JAFFGJDM_00389	8.74e-146	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
JAFFGJDM_00390	2.14e-234	scrR	-	-	K	ko:K03484	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
JAFFGJDM_00391	0.0	scrB	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
JAFFGJDM_00392	0.0	scrA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
JAFFGJDM_00393	2.14e-231	-	-	-	M	-	-	-	CHAP domain
JAFFGJDM_00394	2.79e-102	-	-	-	-	-	-	-	-
JAFFGJDM_00395	1.06e-58	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
JAFFGJDM_00396	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
JAFFGJDM_00397	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
JAFFGJDM_00398	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
JAFFGJDM_00399	3.89e-132	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
JAFFGJDM_00400	1.39e-237	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
JAFFGJDM_00401	7.58e-69	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
JAFFGJDM_00402	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
JAFFGJDM_00403	6.15e-268	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JAFFGJDM_00404	3.16e-231	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
JAFFGJDM_00405	1.26e-303	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
JAFFGJDM_00406	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JAFFGJDM_00407	5.32e-57	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
JAFFGJDM_00408	9.37e-96	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
JAFFGJDM_00409	1.18e-66	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
JAFFGJDM_00410	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
JAFFGJDM_00411	5.37e-72	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
JAFFGJDM_00412	2.34e-76	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
JAFFGJDM_00413	5.62e-95	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
JAFFGJDM_00414	4.13e-186	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
JAFFGJDM_00415	8.12e-144	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
JAFFGJDM_00416	1.55e-29	-	-	-	-	-	-	-	-
JAFFGJDM_00417	5.53e-147	-	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
JAFFGJDM_00418	4.31e-175	-	-	-	-	-	-	-	-
JAFFGJDM_00419	2.76e-112	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
JAFFGJDM_00420	4.28e-187	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
JAFFGJDM_00421	2.96e-23	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
JAFFGJDM_00422	3.09e-71	-	-	-	-	-	-	-	-
JAFFGJDM_00423	1.6e-272	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
JAFFGJDM_00424	1.23e-231	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
JAFFGJDM_00425	0.0	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
JAFFGJDM_00426	9.89e-74	-	-	-	-	-	-	-	-
JAFFGJDM_00427	0.0	sasH	3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45	-	F	ko:K01081,ko:K01119,ko:K07004,ko:K08693,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
JAFFGJDM_00428	4.25e-119	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
JAFFGJDM_00429	6.38e-184	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
JAFFGJDM_00430	2.15e-137	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
JAFFGJDM_00431	6.9e-150	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
JAFFGJDM_00432	1.76e-234	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
JAFFGJDM_00460	1.72e-286	-	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyl transferase 4-like domain
JAFFGJDM_00461	3.68e-256	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
JAFFGJDM_00462	5.35e-224	mprF	-	-	S	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
JAFFGJDM_00463	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
JAFFGJDM_00464	1.3e-40	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
JAFFGJDM_00465	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
JAFFGJDM_00466	1.58e-101	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
JAFFGJDM_00467	5.18e-90	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
JAFFGJDM_00470	5.31e-211	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
JAFFGJDM_00473	7.29e-287	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
JAFFGJDM_00474	0.0	mdr	-	-	EGP	-	-	-	Major Facilitator
JAFFGJDM_00476	1.92e-102	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
JAFFGJDM_00477	3.39e-154	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
JAFFGJDM_00478	1.32e-151	-	-	-	S	-	-	-	Putative esterase
JAFFGJDM_00479	1.81e-270	-	2.7.1.211	-	G	ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
JAFFGJDM_00480	7.66e-248	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
JAFFGJDM_00481	3.75e-168	-	-	-	K	-	-	-	rpiR family
JAFFGJDM_00482	1.29e-27	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
JAFFGJDM_00483	7.25e-309	cydA	1.10.3.14	-	C	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	ubiquinol oxidase
JAFFGJDM_00484	9.83e-236	cydB	1.10.3.14	-	C	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	ko00000,ko00001,ko00002,ko01000	Cytochrome d ubiquinol oxidase subunit II
JAFFGJDM_00485	0.0	cydC	-	-	CO	ko:K16013	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
JAFFGJDM_00486	0.0	cydD	-	-	CO	ko:K16012	ko02010,map02010	ko00000,ko00001,ko02000	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
JAFFGJDM_00487	8.7e-166	menG	2.1.1.163, 2.1.1.201	-	H	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
JAFFGJDM_00488	1.38e-226	hepT	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
JAFFGJDM_00489	1.03e-206	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	1,4-dihydroxy-2-naphthoate
JAFFGJDM_00490	3.01e-294	yumB	1.6.99.3	-	C	ko:K03885	ko00190,map00190	ko00000,ko00001,ko01000	NADH dehydrogenase
JAFFGJDM_00491	1.41e-51	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
JAFFGJDM_00492	9.32e-109	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
JAFFGJDM_00493	6.75e-216	-	-	-	K	-	-	-	LysR substrate binding domain
JAFFGJDM_00494	1.39e-156	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
JAFFGJDM_00495	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
JAFFGJDM_00496	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
JAFFGJDM_00497	3.11e-256	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
JAFFGJDM_00498	4.84e-42	-	-	-	-	-	-	-	-
JAFFGJDM_00499	9.14e-187	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
JAFFGJDM_00500	8.73e-205	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
JAFFGJDM_00501	8.63e-195	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
JAFFGJDM_00502	4.66e-179	pstB	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
JAFFGJDM_00503	6.07e-138	-	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
JAFFGJDM_00504	2.69e-156	phoB	-	-	T	ko:K07658	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	Transcriptional regulatory protein, C terminal
JAFFGJDM_00505	0.0	phoR	2.7.13.3	-	T	ko:K07636	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
JAFFGJDM_00506	3.54e-300	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
JAFFGJDM_00507	1.59e-61	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain
JAFFGJDM_00509	9.64e-307	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
JAFFGJDM_00510	2.23e-197	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
JAFFGJDM_00511	5.6e-129	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
JAFFGJDM_00512	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
JAFFGJDM_00513	6.03e-218	fba	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-1,6-bisphosphate aldolase, class II
JAFFGJDM_00514	8.08e-108	-	-	-	S	-	-	-	PFAM Archaeal ATPase
JAFFGJDM_00515	1.32e-105	-	-	-	S	-	-	-	PFAM Archaeal ATPase
JAFFGJDM_00516	7.02e-36	-	-	-	-	-	-	-	-
JAFFGJDM_00517	1.01e-98	menA	2.5.1.74	-	H	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01006	UbiA prenyltransferase family
JAFFGJDM_00518	1.86e-91	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
JAFFGJDM_00519	1.28e-226	-	-	-	S	-	-	-	PFAM Archaeal ATPase
JAFFGJDM_00520	4.77e-248	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
JAFFGJDM_00521	4.95e-164	citG	2.4.2.52	-	H	ko:K05966	ko02020,map02020	ko00000,ko00001,ko01000	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
JAFFGJDM_00522	2.74e-06	-	-	-	S	-	-	-	PFAM Archaeal ATPase
JAFFGJDM_00523	5.46e-182	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
JAFFGJDM_00524	7.62e-134	-	-	-	G	-	-	-	Phosphoglycerate mutase family
JAFFGJDM_00525	0.0	pps	2.7.9.2	-	H	ko:K01007	ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
JAFFGJDM_00526	1.21e-207	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
JAFFGJDM_00527	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
JAFFGJDM_00528	8.43e-73	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
JAFFGJDM_00529	1.27e-290	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
JAFFGJDM_00530	0.0	yhaN	-	-	L	-	-	-	AAA domain
JAFFGJDM_00531	4.53e-239	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
JAFFGJDM_00533	9.67e-33	-	-	-	S	-	-	-	Domain of unknown function DUF1829
JAFFGJDM_00534	0.0	-	-	-	-	-	-	-	-
JAFFGJDM_00535	5.74e-96	eda	4.1.2.14, 4.1.3.42	-	G	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	KDPG and KHG aldolase
JAFFGJDM_00536	3.12e-196	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
JAFFGJDM_00537	1.2e-41	-	-	-	-	-	-	-	-
JAFFGJDM_00538	1.61e-101	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
JAFFGJDM_00539	3.67e-174	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
JAFFGJDM_00540	1.63e-281	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
JAFFGJDM_00541	2.16e-163	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
JAFFGJDM_00543	1.35e-71	ytpP	-	-	CO	-	-	-	Thioredoxin
JAFFGJDM_00544	8.78e-157	XK27_10290	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
JAFFGJDM_00545	2.59e-313	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
JAFFGJDM_00546	4.65e-278	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
JAFFGJDM_00547	2.04e-226	-	-	-	S	-	-	-	SLAP domain
JAFFGJDM_00548	0.0	-	-	-	M	-	-	-	Peptidase family M1 domain
JAFFGJDM_00549	2.43e-239	-	-	-	S	-	-	-	Bacteriocin helveticin-J
JAFFGJDM_00550	1.33e-67	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
JAFFGJDM_00551	2.53e-139	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
JAFFGJDM_00552	1.98e-35	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
JAFFGJDM_00553	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JAFFGJDM_00554	7.81e-199	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
JAFFGJDM_00555	2.16e-136	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
JAFFGJDM_00556	1.29e-106	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
JAFFGJDM_00557	0.0	dnaB2	-	-	L	ko:K03346	-	ko00000,ko03032	Replication initiation and membrane attachment
JAFFGJDM_00558	1.31e-215	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
JAFFGJDM_00559	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JAFFGJDM_00560	5.59e-98	-	-	-	-	-	-	-	-
JAFFGJDM_00561	4.78e-261	-	-	-	S	-	-	-	Domain of unknown function (DUF389)
JAFFGJDM_00562	1.53e-122	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
JAFFGJDM_00563	6.49e-137	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
JAFFGJDM_00566	8.95e-70	-	-	-	K	-	-	-	LytTr DNA-binding domain
JAFFGJDM_00567	9.29e-51	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
JAFFGJDM_00568	1.81e-190	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
JAFFGJDM_00569	2.25e-30	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	domain protein
JAFFGJDM_00570	1.1e-128	-	-	-	E	ko:K02054	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
JAFFGJDM_00571	6.18e-123	rihC	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
JAFFGJDM_00572	1.07e-93	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
JAFFGJDM_00573	9.64e-38	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
JAFFGJDM_00574	8.69e-76	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
JAFFGJDM_00575	1.25e-192	add	3.5.4.2, 3.5.4.4	-	F	ko:K01488,ko:K02029,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
JAFFGJDM_00576	3.01e-255	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
JAFFGJDM_00577	6.85e-109	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
JAFFGJDM_00578	5.03e-256	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
JAFFGJDM_00579	1.77e-157	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
JAFFGJDM_00580	9.22e-141	yqeK	-	-	H	-	-	-	Hydrolase, HD family
JAFFGJDM_00581	5.95e-77	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
JAFFGJDM_00582	8.01e-276	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
JAFFGJDM_00583	2.19e-125	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
JAFFGJDM_00584	3.52e-163	csrR	-	-	K	-	-	-	response regulator
JAFFGJDM_00585	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
JAFFGJDM_00586	2.19e-18	-	-	-	-	-	-	-	-
JAFFGJDM_00587	4.28e-125	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
JAFFGJDM_00588	1.03e-283	-	-	-	S	-	-	-	SLAP domain
JAFFGJDM_00589	3.23e-108	-	-	-	S	ko:K19055	-	ko00000,ko01000,ko03016	Aminoacyl-tRNA editing domain
JAFFGJDM_00590	2.43e-216	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
JAFFGJDM_00591	1.32e-57	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
JAFFGJDM_00592	1.37e-173	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JAFFGJDM_00593	3.71e-76	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
JAFFGJDM_00595	1.48e-138	glnP9	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter, permease protein
JAFFGJDM_00596	1.68e-149	glnP7	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter permease
JAFFGJDM_00597	4.57e-163	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
JAFFGJDM_00598	3.72e-202	cjaA	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
JAFFGJDM_00599	2.9e-254	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
JAFFGJDM_00600	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
JAFFGJDM_00601	7.84e-89	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
JAFFGJDM_00602	8.21e-215	ldh3	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	lactate/malate dehydrogenase, alpha/beta C-terminal domain
JAFFGJDM_00603	2.24e-202	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
JAFFGJDM_00604	1.8e-34	-	-	-	-	-	-	-	-
JAFFGJDM_00605	0.0	sufI	-	-	Q	-	-	-	Multicopper oxidase
JAFFGJDM_00606	1.76e-193	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
JAFFGJDM_00607	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
JAFFGJDM_00608	6.53e-291	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
JAFFGJDM_00609	2.48e-313	-	-	-	S	ko:K12941	-	ko00000,ko01002	Peptidase dimerisation domain
JAFFGJDM_00610	3.2e-176	-	-	-	S	-	-	-	Protein of unknown function (DUF3100)
JAFFGJDM_00611	2.87e-107	-	-	-	S	-	-	-	An automated process has identified a potential problem with this gene model
JAFFGJDM_00612	7.65e-65	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
JAFFGJDM_00613	3.7e-164	-	-	-	S	-	-	-	SLAP domain
JAFFGJDM_00614	1.75e-120	-	-	-	-	-	-	-	-
JAFFGJDM_00616	7.04e-159	-	-	-	M	ko:K14193	ko05150,map05150	ko00000,ko00001	Iron Transport-associated domain
JAFFGJDM_00617	2.07e-203	isdE	-	-	P	ko:K02016	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Periplasmic binding protein
JAFFGJDM_00618	1.55e-201	isdF	-	-	U	ko:K02015	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JAFFGJDM_00619	1.49e-178	-	3.6.3.34	-	HP	ko:K02013	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	abc transporter atp-binding protein
JAFFGJDM_00620	2.22e-60	hupB2	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
JAFFGJDM_00621	2.74e-69	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	Bacterial toxin of type II toxin-antitoxin system, YafQ
JAFFGJDM_00622	9.43e-52	-	-	-	S	ko:K07473	-	ko00000,ko02048	RelB antitoxin
JAFFGJDM_00623	7.04e-218	-	-	-	G	-	-	-	BadF/BadG/BcrA/BcrD ATPase family
JAFFGJDM_00624	0.0	-	-	-	S	-	-	-	membrane
JAFFGJDM_00625	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
JAFFGJDM_00626	6.25e-29	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
JAFFGJDM_00627	7.92e-126	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JAFFGJDM_00628	9.32e-154	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Rhomboid family
JAFFGJDM_00629	1e-47	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
JAFFGJDM_00630	4.95e-89	yqhL	-	-	P	-	-	-	Rhodanese-like protein
JAFFGJDM_00631	1.82e-214	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
JAFFGJDM_00632	2.05e-286	ynbB	-	-	P	-	-	-	aluminum resistance
JAFFGJDM_00633	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
JAFFGJDM_00634	9.64e-219	-	-	-	-	-	-	-	-
JAFFGJDM_00635	1.21e-204	-	-	-	-	-	-	-	-
JAFFGJDM_00637	3.96e-19	-	-	-	S	-	-	-	HicA toxin of bacterial toxin-antitoxin,
JAFFGJDM_00638	1.92e-42	-	-	-	S	-	-	-	protein encoded in hypervariable junctions of pilus gene clusters
JAFFGJDM_00640	6.79e-45	-	-	-	-	-	-	-	-
JAFFGJDM_00641	3e-271	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
JAFFGJDM_00642	1.22e-202	-	-	-	S	-	-	-	interspecies interaction between organisms
JAFFGJDM_00643	1.28e-09	-	-	-	S	-	-	-	PFAM HicB family
JAFFGJDM_00644	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
JAFFGJDM_00646	1.69e-126	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
JAFFGJDM_00647	0.0	-	-	-	E	-	-	-	Amino acid permease
JAFFGJDM_00648	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
JAFFGJDM_00649	2.76e-83	-	-	-	-	-	-	-	-
JAFFGJDM_00650	0.0	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
JAFFGJDM_00651	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 31 family
JAFFGJDM_00652	1.1e-110	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
JAFFGJDM_00653	2.18e-103	-	-	-	K	ko:K02529	-	ko00000,ko03000	helix_turn _helix lactose operon repressor
JAFFGJDM_00654	5.03e-297	-	-	-	G	ko:K15770	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
JAFFGJDM_00655	0.0	prtB	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
JAFFGJDM_00656	2.55e-223	dhaK	2.7.1.121	-	G	ko:K05878	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak1 domain
JAFFGJDM_00657	1.39e-120	dhaL	2.7.1.121	-	S	ko:K05879	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak2
JAFFGJDM_00658	4.92e-73	dhaM	2.7.1.121	-	S	ko:K05881	ko00561,map00561	ko00000,ko00001,ko01000,ko02000	PTS system fructose IIA component
JAFFGJDM_00659	1.22e-157	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
JAFFGJDM_00660	2.28e-21	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
JAFFGJDM_00661	1.18e-89	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
JAFFGJDM_00662	4.07e-140	-	-	-	K	-	-	-	LysR family
JAFFGJDM_00663	0.0	-	-	-	C	-	-	-	FMN_bind
JAFFGJDM_00664	2.52e-140	-	-	-	K	-	-	-	LysR family
JAFFGJDM_00665	3.53e-287	-	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
JAFFGJDM_00666	0.0	-	-	-	C	-	-	-	FMN_bind
JAFFGJDM_00667	4.05e-242	-	-	-	K	ko:K02529	-	ko00000,ko03000	Periplasmic binding protein-like domain
JAFFGJDM_00668	5.55e-137	-	-	-	K	-	-	-	Transcriptional regulator, AbiEi antitoxin
JAFFGJDM_00669	1.41e-209	-	-	-	S	-	-	-	Nucleotidyl transferase AbiEii toxin, Type IV TA system
JAFFGJDM_00670	2.84e-240	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
JAFFGJDM_00671	2.51e-184	lacM	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
JAFFGJDM_00672	0.0	lacL	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
JAFFGJDM_00673	1.48e-210	lacR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
JAFFGJDM_00674	0.0	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
JAFFGJDM_00675	0.0	lacZ	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	-beta-galactosidase
JAFFGJDM_00676	4.16e-280	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
JAFFGJDM_00677	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
JAFFGJDM_00678	3.94e-252	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
JAFFGJDM_00679	2.14e-48	-	-	-	-	-	-	-	-
JAFFGJDM_00680	1.14e-208	-	-	-	K	ko:K03484	-	ko00000,ko03000	Periplasmic binding protein domain
JAFFGJDM_00681	5.69e-179	msmE	-	-	G	ko:K10117	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
JAFFGJDM_00682	1.05e-129	-	-	-	T	-	-	-	Region found in RelA / SpoT proteins
JAFFGJDM_00683	4.52e-35	dltr	-	-	K	-	-	-	response regulator
JAFFGJDM_00684	2.14e-85	dltr	-	-	K	-	-	-	response regulator
JAFFGJDM_00685	3e-290	sptS	-	-	T	-	-	-	Histidine kinase
JAFFGJDM_00686	5.3e-264	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
JAFFGJDM_00687	2.65e-89	-	-	-	O	-	-	-	OsmC-like protein
JAFFGJDM_00688	1.92e-113	yhaH	-	-	S	-	-	-	Protein of unknown function (DUF805)
JAFFGJDM_00689	2.05e-110	-	-	-	-	-	-	-	-
JAFFGJDM_00690	0.0	-	-	-	-	-	-	-	-
JAFFGJDM_00692	9.84e-63	-	-	-	S	-	-	-	Fic/DOC family
JAFFGJDM_00693	0.0	potE	-	-	E	-	-	-	Amino Acid
JAFFGJDM_00694	4.71e-283	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JAFFGJDM_00695	4.78e-308	lctO	1.13.12.4	-	C	ko:K00467,ko:K10530	ko00620,map00620	ko00000,ko00001,ko01000	L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
JAFFGJDM_00696	5.17e-169	dapE	3.5.1.18	-	E	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000	succinyl-diaminopimelate desuccinylase
JAFFGJDM_00697	1.6e-69	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
JAFFGJDM_00698	1.56e-198	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
JAFFGJDM_00699	1.63e-159	-	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
JAFFGJDM_00700	1.03e-47	-	-	-	-	-	-	-	-
JAFFGJDM_00701	0.0	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
JAFFGJDM_00702	6.38e-154	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
JAFFGJDM_00703	3.86e-109	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
JAFFGJDM_00704	0.0	pulA	3.2.1.41	CBM48,GH13	G	ko:K01200	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko01000	belongs to the glycosyl hydrolase 13 family
JAFFGJDM_00705	4.14e-113	-	-	-	K	ko:K03484	-	ko00000,ko03000	Periplasmic binding protein domain
JAFFGJDM_00707	5.32e-42	-	-	-	-	ko:K18829	-	ko00000,ko02048	-
JAFFGJDM_00708	4.02e-91	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	Toxin-antitoxin system, toxin component, MazF family
JAFFGJDM_00709	7.71e-133	-	-	-	L	-	-	-	Integrase
JAFFGJDM_00710	1.8e-139	-	-	-	L	-	-	-	PFAM Integrase catalytic
JAFFGJDM_00711	2.28e-76	eriC	-	-	P	ko:K03281	-	ko00000	chloride
JAFFGJDM_00712	1.59e-66	eriC	-	-	P	ko:K03281	-	ko00000	chloride
JAFFGJDM_00713	2.94e-74	eriC	-	-	P	ko:K03281	-	ko00000	chloride
JAFFGJDM_00714	1.45e-34	-	-	-	K	-	-	-	FCD
JAFFGJDM_00715	3.87e-20	-	-	-	K	-	-	-	FCD
JAFFGJDM_00716	4.37e-132	-	-	-	GM	-	-	-	NmrA-like family
JAFFGJDM_00717	5.5e-154	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
JAFFGJDM_00718	1.56e-164	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
JAFFGJDM_00719	6.2e-212	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
JAFFGJDM_00720	1.01e-122	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
JAFFGJDM_00721	9.05e-231	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
JAFFGJDM_00722	2.04e-313	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
JAFFGJDM_00723	4.22e-269	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
JAFFGJDM_00724	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
JAFFGJDM_00725	6.69e-115	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
JAFFGJDM_00726	6.79e-190	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
JAFFGJDM_00727	8.74e-62	-	-	-	-	-	-	-	-
JAFFGJDM_00728	2.88e-105	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
JAFFGJDM_00729	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
JAFFGJDM_00730	1.02e-29	-	-	-	S	-	-	-	Alpha beta hydrolase
JAFFGJDM_00731	2.48e-80	-	-	-	S	-	-	-	Alpha beta hydrolase
JAFFGJDM_00732	8.51e-50	-	-	-	-	-	-	-	-
JAFFGJDM_00733	4.3e-66	-	-	-	-	-	-	-	-
JAFFGJDM_00734	9.38e-189	supH	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
JAFFGJDM_00735	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
JAFFGJDM_00736	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
JAFFGJDM_00737	1.82e-86	yusI	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	Belongs to the ArsC family
JAFFGJDM_00738	1.23e-227	lipA	-	-	I	-	-	-	Carboxylesterase family
JAFFGJDM_00740	2.73e-268	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
JAFFGJDM_00741	8.57e-202	cinI	-	-	S	ko:K06889	-	ko00000	Serine hydrolase (FSH1)
JAFFGJDM_00742	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2207)
JAFFGJDM_00743	2.07e-38	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
JAFFGJDM_00745	0.0	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
JAFFGJDM_00746	5.24e-194	-	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JAFFGJDM_00747	6.82e-66	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
JAFFGJDM_00748	7.95e-64	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
JAFFGJDM_00749	2.14e-257	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
JAFFGJDM_00750	2.11e-133	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JAFFGJDM_00751	7.98e-93	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
JAFFGJDM_00752	2.78e-85	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JAFFGJDM_00753	7.19e-199	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
JAFFGJDM_00754	1.97e-248	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
JAFFGJDM_00755	1.53e-47	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
JAFFGJDM_00756	6.44e-205	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
JAFFGJDM_00757	7.22e-197	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
JAFFGJDM_00758	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
JAFFGJDM_00759	2.19e-100	-	-	-	S	-	-	-	ASCH
JAFFGJDM_00760	5.97e-145	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
JAFFGJDM_00761	2.37e-46	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
JAFFGJDM_00762	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JAFFGJDM_00763	4.41e-220	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
JAFFGJDM_00764	1.06e-308	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JAFFGJDM_00765	1.98e-180	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
JAFFGJDM_00766	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
JAFFGJDM_00767	1.71e-208	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
JAFFGJDM_00768	4.33e-153	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
JAFFGJDM_00769	3.84e-160	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
JAFFGJDM_00770	2.2e-41	-	-	-	-	-	-	-	-
JAFFGJDM_00771	1.33e-35	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
JAFFGJDM_00772	8.29e-75	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
JAFFGJDM_00773	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
JAFFGJDM_00774	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JAFFGJDM_00775	3.69e-233	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
JAFFGJDM_00776	1.04e-45	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JAFFGJDM_00777	7.02e-245	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
JAFFGJDM_00778	3.27e-229	oppF	-	-	P	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
JAFFGJDM_00779	1.53e-218	oppB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
JAFFGJDM_00780	3.06e-181	oppC5	-	-	P	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
JAFFGJDM_00781	2.57e-206	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
JAFFGJDM_00782	2.37e-169	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
JAFFGJDM_00783	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
JAFFGJDM_00784	2.8e-160	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
JAFFGJDM_00785	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
JAFFGJDM_00786	4.69e-226	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
JAFFGJDM_00787	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
JAFFGJDM_00788	1.69e-06	-	-	-	-	-	-	-	-
JAFFGJDM_00789	2.1e-31	-	-	-	-	-	-	-	-
JAFFGJDM_00790	5.41e-172	cysA	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
JAFFGJDM_00791	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
JAFFGJDM_00792	0.0	ctrA	-	-	E	ko:K03294	-	ko00000	amino acid
JAFFGJDM_00793	5.56e-72	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
JAFFGJDM_00794	1.34e-289	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JAFFGJDM_00795	6.78e-60	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
JAFFGJDM_00796	2.08e-122	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
JAFFGJDM_00797	8.68e-171	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
JAFFGJDM_00798	1.64e-74	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
JAFFGJDM_00799	4.96e-270	-	-	-	S	-	-	-	SLAP domain
JAFFGJDM_00800	1.15e-154	ung2	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil-DNA glycosylase
JAFFGJDM_00801	7.18e-187	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
JAFFGJDM_00802	9.86e-146	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JAFFGJDM_00803	4.16e-51	ynzC	-	-	S	-	-	-	UPF0291 protein
JAFFGJDM_00804	1.3e-40	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
JAFFGJDM_00805	0.0	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
JAFFGJDM_00806	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
JAFFGJDM_00807	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
JAFFGJDM_00808	8.61e-296	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
JAFFGJDM_00809	1.65e-151	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
JAFFGJDM_00810	5.83e-251	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
JAFFGJDM_00811	2.21e-180	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
JAFFGJDM_00812	1.76e-235	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
JAFFGJDM_00813	5.86e-168	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
JAFFGJDM_00814	1.22e-121	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
JAFFGJDM_00815	6.38e-178	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
JAFFGJDM_00816	3.93e-181	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
JAFFGJDM_00817	6.38e-254	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
JAFFGJDM_00818	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
JAFFGJDM_00819	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JAFFGJDM_00820	3.4e-108	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
JAFFGJDM_00821	1.19e-259	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
JAFFGJDM_00822	3.75e-63	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
JAFFGJDM_00823	1.61e-64	ylxQ	-	-	J	-	-	-	ribosomal protein
JAFFGJDM_00824	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
JAFFGJDM_00825	1.67e-79	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
JAFFGJDM_00826	1.64e-198	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
JAFFGJDM_00827	5.35e-223	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
JAFFGJDM_00828	6.02e-247	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
JAFFGJDM_00829	3.74e-109	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
JAFFGJDM_00830	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
JAFFGJDM_00831	6.87e-277	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
JAFFGJDM_00832	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
JAFFGJDM_00833	1.09e-226	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
JAFFGJDM_00838	2.28e-19	-	-	-	-	-	-	-	-
JAFFGJDM_00840	1.87e-21	-	-	-	K	-	-	-	Cro/C1-type HTH DNA-binding domain
JAFFGJDM_00841	1.74e-17	-	-	-	-	-	-	-	-
JAFFGJDM_00843	8.82e-97	-	-	-	S	-	-	-	Phage antirepressor protein KilAC domain
JAFFGJDM_00848	2.18e-07	-	-	-	-	-	-	-	-
JAFFGJDM_00849	2.06e-123	-	-	-	S	-	-	-	AntA/AntB antirepressor
JAFFGJDM_00854	3.76e-07	-	-	-	K	-	-	-	Helix-turn-helix domain
JAFFGJDM_00858	6.82e-72	-	-	-	S	-	-	-	Protein of unknown function (DUF1071)
JAFFGJDM_00859	1.4e-39	-	-	-	S	-	-	-	Conserved phage C-terminus (Phg_2220_C)
JAFFGJDM_00860	6.3e-64	-	-	-	L	ko:K02315	-	ko00000,ko03032	IstB-like ATP binding protein
JAFFGJDM_00866	5.99e-52	-	-	-	L	-	-	-	Endodeoxyribonuclease RusA
JAFFGJDM_00867	1.08e-10	-	-	-	-	-	-	-	-
JAFFGJDM_00875	8.27e-46	-	-	-	S	-	-	-	HicB_like antitoxin of bacterial toxin-antitoxin system
JAFFGJDM_00876	7.69e-16	-	-	-	N	-	-	-	HicA toxin of bacterial toxin-antitoxin,
JAFFGJDM_00877	1.27e-47	-	-	-	L	ko:K07474	-	ko00000	Terminase small subunit
JAFFGJDM_00878	3.79e-288	-	-	-	S	-	-	-	Terminase-like family
JAFFGJDM_00879	2.28e-178	-	-	-	S	ko:K09961	-	ko00000	Protein of unknown function (DUF1073)
JAFFGJDM_00880	5.89e-127	-	-	-	S	-	-	-	Phage Mu protein F like protein
JAFFGJDM_00881	1.14e-16	-	-	-	S	-	-	-	Lysin motif
JAFFGJDM_00882	2.77e-137	-	-	-	S	ko:K09960	-	ko00000	Uncharacterized protein conserved in bacteria (DUF2213)
JAFFGJDM_00883	5.09e-76	-	-	-	-	-	-	-	-
JAFFGJDM_00884	1.83e-181	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2184)
JAFFGJDM_00886	2.18e-96	-	-	-	-	-	-	-	-
JAFFGJDM_00887	1.8e-59	-	-	-	-	-	-	-	-
JAFFGJDM_00888	7.95e-69	-	-	-	-	-	-	-	-
JAFFGJDM_00889	7.86e-194	-	-	-	S	-	-	-	Protein of unknown function (DUF3383)
JAFFGJDM_00890	1.33e-73	-	-	-	-	-	-	-	-
JAFFGJDM_00893	0.0	-	-	-	L	-	-	-	Phage tail tape measure protein TP901
JAFFGJDM_00894	1.06e-69	-	-	-	M	-	-	-	LysM domain
JAFFGJDM_00895	6.91e-61	-	-	-	-	-	-	-	-
JAFFGJDM_00896	1.11e-128	-	-	-	-	-	-	-	-
JAFFGJDM_00897	4.6e-63	-	-	-	-	-	-	-	-
JAFFGJDM_00898	2.37e-43	-	-	-	-	-	-	-	-
JAFFGJDM_00899	3.71e-154	-	-	-	S	-	-	-	Baseplate J-like protein
JAFFGJDM_00901	8.2e-07	-	-	-	-	-	-	-	-
JAFFGJDM_00907	1.28e-54	-	-	-	-	-	-	-	-
JAFFGJDM_00908	2.12e-27	-	-	-	S	-	-	-	Phage uncharacterised protein (Phage_XkdX)
JAFFGJDM_00911	6.31e-27	-	-	-	-	-	-	-	-
JAFFGJDM_00912	1.76e-38	-	-	-	-	-	-	-	-
JAFFGJDM_00913	1.54e-112	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
JAFFGJDM_00914	4.51e-60	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
JAFFGJDM_00915	5.3e-32	-	-	-	-	-	-	-	-
JAFFGJDM_00916	9.71e-47	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
JAFFGJDM_00917	7e-131	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
JAFFGJDM_00918	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
JAFFGJDM_00919	1.15e-121	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JAFFGJDM_00920	4.97e-64	-	-	-	S	-	-	-	Metal binding domain of Ada
JAFFGJDM_00921	0.0	-	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
JAFFGJDM_00922	3.03e-177	lysR5	-	-	K	-	-	-	LysR substrate binding domain
JAFFGJDM_00923	2.06e-298	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
JAFFGJDM_00924	5.39e-84	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
JAFFGJDM_00925	2.01e-135	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
JAFFGJDM_00926	1.76e-122	citX	2.7.7.61	-	HI	ko:K05964	ko02020,map02020	ko00000,ko00001,ko01000	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
JAFFGJDM_00927	1.07e-287	-	-	-	S	-	-	-	Sterol carrier protein domain
JAFFGJDM_00928	4.04e-29	-	-	-	-	-	-	-	-
JAFFGJDM_00929	6.93e-140	-	-	-	K	-	-	-	LysR substrate binding domain
JAFFGJDM_00930	1.13e-126	-	-	-	-	-	-	-	-
JAFFGJDM_00931	5.04e-154	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
JAFFGJDM_00932	5.73e-153	-	-	-	-	-	-	-	-
JAFFGJDM_00933	7.04e-91	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
JAFFGJDM_00934	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
JAFFGJDM_00935	1.15e-64	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
JAFFGJDM_00936	5.51e-35	-	-	-	-	-	-	-	-
JAFFGJDM_00937	8.71e-31	-	-	-	G	-	-	-	Ribose/Galactose Isomerase
JAFFGJDM_00938	6.13e-70	-	-	-	K	-	-	-	sequence-specific DNA binding
JAFFGJDM_00939	5.97e-55	-	-	-	S	-	-	-	SnoaL-like domain
JAFFGJDM_00940	0.0	-	-	-	L	-	-	-	PLD-like domain
JAFFGJDM_00941	6.83e-133	yrgI	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Histidine phosphatase superfamily (branch 1)
JAFFGJDM_00942	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
JAFFGJDM_00943	0.0	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase
JAFFGJDM_00944	2.95e-283	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
JAFFGJDM_00945	3.06e-202	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
JAFFGJDM_00946	5.47e-151	-	-	-	-	-	-	-	-
JAFFGJDM_00947	2.83e-205	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JAFFGJDM_00949	1.22e-136	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JAFFGJDM_00950	2e-149	-	-	-	S	-	-	-	Peptidase family M23
JAFFGJDM_00951	1.34e-22	-	-	-	S	-	-	-	CRISPR-associated protein (Cas_Csn2)
JAFFGJDM_00952	6.94e-199	yqfL	2.7.11.33, 2.7.4.28	-	F	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
JAFFGJDM_00953	4.83e-30	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
JAFFGJDM_00954	1.08e-92	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
JAFFGJDM_00955	1.74e-224	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
JAFFGJDM_00956	3.58e-129	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
JAFFGJDM_00957	1.37e-216	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
JAFFGJDM_00958	4.11e-173	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
JAFFGJDM_00959	9.03e-229	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
JAFFGJDM_00960	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
JAFFGJDM_00961	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
JAFFGJDM_00962	9e-255	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
JAFFGJDM_00963	4.34e-166	-	-	-	S	-	-	-	Peptidase family M23
JAFFGJDM_00964	5.37e-106	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
JAFFGJDM_00965	2.8e-159	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
JAFFGJDM_00966	8.12e-196	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
JAFFGJDM_00967	2.86e-307	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
JAFFGJDM_00968	1.25e-80	lexA	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator, GntR family
JAFFGJDM_00969	1.33e-161	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
JAFFGJDM_00970	1.65e-180	-	-	-	-	-	-	-	-
JAFFGJDM_00971	2.54e-176	-	-	-	-	-	-	-	-
JAFFGJDM_00972	3.85e-193	-	-	-	-	-	-	-	-
JAFFGJDM_00973	3.49e-36	-	-	-	-	-	-	-	-
JAFFGJDM_00974	1.27e-133	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
JAFFGJDM_00975	4.01e-184	-	-	-	-	-	-	-	-
JAFFGJDM_00976	4.4e-215	-	-	-	-	-	-	-	-
JAFFGJDM_00977	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
JAFFGJDM_00978	1.28e-150	-	3.1.3.102, 3.1.3.104, 3.1.3.23	-	G	ko:K07757,ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Sucrose-6F-phosphate phosphohydrolase
JAFFGJDM_00979	4.87e-236	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
JAFFGJDM_00980	6.67e-261	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
JAFFGJDM_00981	5.87e-228	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
JAFFGJDM_00982	3.02e-173	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	GHMP kinases N terminal domain
JAFFGJDM_00983	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
JAFFGJDM_00984	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
JAFFGJDM_00985	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
JAFFGJDM_00986	9.62e-116	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
JAFFGJDM_00987	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
JAFFGJDM_00988	6.91e-149	dnaD	-	-	L	ko:K02086	-	ko00000	DnaD domain protein
JAFFGJDM_00989	5.5e-148	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JAFFGJDM_00990	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
JAFFGJDM_00991	8.47e-152	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
JAFFGJDM_00992	1.18e-139	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
JAFFGJDM_00993	1.85e-90	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
JAFFGJDM_00994	1.68e-277	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
JAFFGJDM_00995	1.93e-308	cpdA	-	-	S	-	-	-	Calcineurin-like phosphoesterase
JAFFGJDM_00996	9.67e-104	-	-	-	-	-	-	-	-
JAFFGJDM_00997	9.91e-150	-	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Ham1 family
JAFFGJDM_00998	3.56e-47	-	-	-	-	-	-	-	-
JAFFGJDM_00999	4.13e-83	-	-	-	-	-	-	-	-
JAFFGJDM_01002	1.51e-159	-	-	-	-	-	-	-	-
JAFFGJDM_01003	4.83e-136	pncA	-	-	Q	-	-	-	Isochorismatase family
JAFFGJDM_01004	1.24e-08	-	-	-	-	-	-	-	-
JAFFGJDM_01005	1.73e-48	-	-	-	-	-	-	-	-
JAFFGJDM_01006	0.0	snf	-	-	KL	-	-	-	domain protein
JAFFGJDM_01007	1.92e-170	snf	-	-	KL	-	-	-	domain protein
JAFFGJDM_01008	9.39e-141	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
JAFFGJDM_01009	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
JAFFGJDM_01010	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
JAFFGJDM_01011	9.08e-234	-	-	-	K	-	-	-	Transcriptional regulator
JAFFGJDM_01012	1.94e-217	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
JAFFGJDM_01013	5.91e-08	-	-	-	-	-	-	-	-
JAFFGJDM_01014	7.23e-78	-	-	-	L	ko:K07484	-	ko00000	IS66 Orf2 like protein
JAFFGJDM_01015	8.17e-18	-	-	-	S	-	-	-	Transposase C of IS166 homeodomain
JAFFGJDM_01016	4.09e-11	-	-	-	L	ko:K07496	-	ko00000	Transposase
JAFFGJDM_01017	2.3e-36	XK27_03150	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
JAFFGJDM_01018	2.66e-157	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
JAFFGJDM_01019	3.35e-269	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
JAFFGJDM_01020	4.36e-142	XK27_00160	-	-	S	-	-	-	Domain of unknown function (DUF5052)
JAFFGJDM_01021	1.5e-90	-	-	-	-	-	-	-	-
JAFFGJDM_01022	1.24e-258	xerS	-	-	L	ko:K03733	-	ko00000,ko03036	Belongs to the 'phage' integrase family
JAFFGJDM_01023	0.0	mutS1	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
JAFFGJDM_01024	3.31e-204	-	-	-	S	-	-	-	EDD domain protein, DegV family
JAFFGJDM_01025	2.06e-88	-	-	-	-	-	-	-	-
JAFFGJDM_01026	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
JAFFGJDM_01027	0.0	carB1	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
JAFFGJDM_01028	4.13e-255	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
JAFFGJDM_01029	3.24e-221	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
JAFFGJDM_01030	3.16e-102	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
JAFFGJDM_01031	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
JAFFGJDM_01032	1.61e-70	-	-	-	-	-	-	-	-
JAFFGJDM_01034	8.81e-40	-	-	-	M	-	-	-	Mycoplasma protein of unknown function, DUF285
JAFFGJDM_01035	9.86e-146	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
JAFFGJDM_01036	3.39e-88	-	-	-	S	ko:K06915	-	ko00000	cog cog0433
JAFFGJDM_01038	4.81e-77	-	-	-	S	-	-	-	SIR2-like domain
JAFFGJDM_01039	2.08e-118	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
JAFFGJDM_01040	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
JAFFGJDM_01041	5.22e-54	-	-	-	S	-	-	-	RloB-like protein
JAFFGJDM_01042	1.35e-208	-	-	-	S	ko:K06926	-	ko00000	AAA domain, putative AbiEii toxin, Type IV TA system
JAFFGJDM_01043	0.0	hsdR	3.1.21.3	-	L	ko:K01153	-	ko00000,ko01000,ko02048	DEAD/DEAH box helicase
JAFFGJDM_01044	0.0	-	-	-	S	-	-	-	SLAP domain
JAFFGJDM_01046	5.93e-302	XK27_01810	-	-	S	-	-	-	Calcineurin-like phosphoesterase
JAFFGJDM_01047	1.43e-80	-	-	-	S	ko:K07006	-	ko00000	Pyridoxamine 5'-phosphate oxidase
JAFFGJDM_01048	1.65e-303	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
JAFFGJDM_01050	0.0	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
JAFFGJDM_01051	4.21e-129	treR	-	-	K	ko:K03486	-	ko00000,ko03000	UTRA
JAFFGJDM_01052	0.0	treB	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
JAFFGJDM_01053	1.12e-85	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
JAFFGJDM_01054	6.84e-243	-	-	-	L	ko:K07478	-	ko00000	AAA C-terminal domain
JAFFGJDM_01055	0.0	yqjE	3.4.11.14, 3.4.11.4	-	E	ko:K01258,ko:K01263	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
JAFFGJDM_01056	5.74e-108	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
JAFFGJDM_01057	1.87e-290	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
JAFFGJDM_01058	7.89e-124	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
JAFFGJDM_01059	3.1e-127	pdxK	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
JAFFGJDM_01060	1.59e-259	pbpX1	-	-	V	-	-	-	Beta-lactamase
JAFFGJDM_01061	1.12e-149	maa3	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
JAFFGJDM_01062	6.48e-104	yvbK	-	-	K	-	-	-	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
JAFFGJDM_01063	5.94e-148	-	-	-	I	-	-	-	Acid phosphatase homologues
JAFFGJDM_01064	2.25e-241	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
JAFFGJDM_01065	0.0	uvrA2	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC, A subunit
JAFFGJDM_01066	3.6e-106	-	-	-	C	-	-	-	Flavodoxin
JAFFGJDM_01067	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
JAFFGJDM_01068	4.97e-311	ynbB	-	-	P	-	-	-	aluminum resistance
JAFFGJDM_01069	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
JAFFGJDM_01070	0.0	-	-	-	E	-	-	-	Amino acid permease
JAFFGJDM_01071	7.88e-121	-	-	-	C	-	-	-	Pyridoxamine 5'-phosphate oxidase
JAFFGJDM_01072	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
JAFFGJDM_01073	3.03e-145	ybgF	-	-	E	ko:K02205,ko:K03293,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
JAFFGJDM_01074	1.31e-16	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
JAFFGJDM_01075	2.95e-84	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JAFFGJDM_01076	9.93e-72	crcB1	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JAFFGJDM_01077	5.49e-197	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
JAFFGJDM_01078	5.61e-124	-	-	-	M	-	-	-	LysM domain protein
JAFFGJDM_01079	3.3e-16	-	-	-	T	-	-	-	PemK-like, MazF-like toxin of type II toxin-antitoxin system
JAFFGJDM_01080	3.43e-11	-	-	-	T	ko:K07172	-	ko00000,ko02048	SpoVT / AbrB like domain
JAFFGJDM_01081	1.77e-219	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
JAFFGJDM_01082	1.24e-38	-	-	-	-	-	-	-	-
JAFFGJDM_01083	6.31e-27	-	-	-	-	-	-	-	-
JAFFGJDM_01086	2.12e-27	-	-	-	S	-	-	-	Phage uncharacterised protein (Phage_XkdX)
JAFFGJDM_01087	5.02e-55	-	-	-	-	-	-	-	-
JAFFGJDM_01091	6.92e-17	-	-	-	S	-	-	-	N-acetylmuramoyl-L-alanine amidase activity
JAFFGJDM_01093	2.35e-139	-	-	-	S	-	-	-	Baseplate J-like protein
JAFFGJDM_01095	6.55e-47	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
JAFFGJDM_01096	6.38e-59	-	-	-	S	-	-	-	aldo-keto reductase (NADP) activity
JAFFGJDM_01097	1.19e-97	-	-	-	C	-	-	-	Aldo keto reductase
JAFFGJDM_01098	3.83e-231	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
JAFFGJDM_01099	8.06e-313	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
JAFFGJDM_01100	4.67e-116	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
JAFFGJDM_01101	7.31e-181	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Phage integrase, N-terminal SAM-like domain
JAFFGJDM_01102	1.42e-315	trmFO	2.1.1.74	-	J	ko:K04094	-	ko00000,ko01000,ko03016,ko03036	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
JAFFGJDM_01103	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JAFFGJDM_01104	1.23e-194	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
JAFFGJDM_01105	1.73e-169	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JAFFGJDM_01106	3.71e-199	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
JAFFGJDM_01107	4.11e-124	nhaP4	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
JAFFGJDM_01108	7.2e-49	nhaP4	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
JAFFGJDM_01109	3.67e-88	-	-	-	P	-	-	-	NhaP-type Na H and K H
JAFFGJDM_01110	9.85e-49	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
JAFFGJDM_01111	8.63e-191	degV3	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
JAFFGJDM_01112	1.8e-143	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
JAFFGJDM_01113	5.13e-287	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
JAFFGJDM_01114	2.81e-203	XK27_10395	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JAFFGJDM_01115	2.78e-131	-	-	-	M	-	-	-	hydrolase, family 25
JAFFGJDM_01125	1.35e-204	-	-	-	S	-	-	-	Phage minor structural protein
JAFFGJDM_01127	1.32e-219	-	-	-	D	-	-	-	domain protein
JAFFGJDM_01132	3.91e-38	-	-	-	S	-	-	-	Bacteriophage HK97-gp10, putative tail-component
JAFFGJDM_01135	1.68e-99	-	-	-	S	-	-	-	Phage capsid family
JAFFGJDM_01136	2.11e-56	-	-	-	S	-	-	-	Clp protease
JAFFGJDM_01137	6.21e-116	-	-	-	S	-	-	-	Phage portal protein
JAFFGJDM_01139	4.84e-221	terL	-	-	S	-	-	-	overlaps another CDS with the same product name
JAFFGJDM_01156	2.38e-28	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
JAFFGJDM_01163	2.97e-15	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
JAFFGJDM_01164	1.57e-87	-	-	-	K	-	-	-	Peptidase S24-like
JAFFGJDM_01165	4.09e-61	-	-	-	S	-	-	-	Short C-terminal domain
JAFFGJDM_01168	1.22e-129	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
JAFFGJDM_01169	2.75e-111	-	3.4.21.96	-	S	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	SLAP domain
JAFFGJDM_01170	1.11e-41	yagE	-	-	E	-	-	-	Amino acid permease
JAFFGJDM_01171	2.25e-125	yagE	-	-	E	-	-	-	Amino acid permease
JAFFGJDM_01172	2.81e-189	-	2.3.1.81	-	V	ko:K00662	-	ko00000,ko01000,ko01504	Aminoglycoside 3-N-acetyltransferase
JAFFGJDM_01173	4.87e-187	-	-	-	F	-	-	-	Phosphorylase superfamily
JAFFGJDM_01174	6.97e-53	-	-	-	F	-	-	-	NUDIX domain
JAFFGJDM_01175	2.14e-104	-	-	-	S	-	-	-	AAA domain
JAFFGJDM_01176	9.41e-285	-	-	-	V	-	-	-	ABC transporter transmembrane region
JAFFGJDM_01177	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JAFFGJDM_01178	3.52e-293	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
JAFFGJDM_01179	1.17e-56	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
JAFFGJDM_01180	1.34e-314	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
JAFFGJDM_01181	1.4e-281	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
JAFFGJDM_01182	1.96e-148	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
JAFFGJDM_01183	1.13e-41	-	-	-	M	-	-	-	Lysin motif
JAFFGJDM_01184	8.49e-146	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
JAFFGJDM_01185	4.65e-168	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
JAFFGJDM_01186	7.57e-135	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
JAFFGJDM_01187	1.81e-169	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
JAFFGJDM_01188	4.62e-81	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
JAFFGJDM_01189	5.77e-214	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
JAFFGJDM_01190	4.41e-216	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
JAFFGJDM_01191	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
JAFFGJDM_01192	5.46e-233	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
JAFFGJDM_01193	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
JAFFGJDM_01194	1.25e-38	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
JAFFGJDM_01195	0.0	yfkN	3.1.3.6, 3.1.4.16	-	F	ko:K01119	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
JAFFGJDM_01196	5.14e-38	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
JAFFGJDM_01197	3.57e-47	-	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
JAFFGJDM_01198	1.18e-183	-	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
JAFFGJDM_01199	6.82e-223	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
JAFFGJDM_01200	0.0	oatA	-	-	I	-	-	-	Acyltransferase
JAFFGJDM_01201	1.88e-309	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
JAFFGJDM_01202	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
JAFFGJDM_01203	1.58e-140	yngC	-	-	S	-	-	-	SNARE associated Golgi protein
JAFFGJDM_01204	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
JAFFGJDM_01205	1.14e-230	gyaR	1.1.1.26, 1.1.1.399, 1.1.1.95	-	CH	ko:K00015,ko:K00058	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JAFFGJDM_01206	1.83e-190	yxeH	-	-	S	-	-	-	hydrolase
JAFFGJDM_01207	6.32e-41	-	-	-	S	-	-	-	reductase
JAFFGJDM_01208	2.98e-50	-	-	-	S	-	-	-	reductase
JAFFGJDM_01209	1.19e-43	-	-	-	S	-	-	-	reductase
JAFFGJDM_01210	4.66e-277	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JAFFGJDM_01211	5.51e-284	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
JAFFGJDM_01212	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
JAFFGJDM_01213	7.1e-311	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
JAFFGJDM_01214	1.8e-99	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
JAFFGJDM_01215	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JAFFGJDM_01216	3.8e-80	-	-	-	-	-	-	-	-
JAFFGJDM_01217	4.8e-224	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
JAFFGJDM_01218	1.3e-115	ybaK	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JAFFGJDM_01219	5.26e-15	-	-	-	-	-	-	-	-
JAFFGJDM_01221	9.28e-317	-	-	-	S	-	-	-	Putative threonine/serine exporter
JAFFGJDM_01222	1.05e-226	citR	-	-	K	-	-	-	Putative sugar-binding domain
JAFFGJDM_01223	2.41e-66	-	-	-	-	-	-	-	-
JAFFGJDM_01224	7.91e-14	-	-	-	-	-	-	-	-
JAFFGJDM_01225	8.1e-87	-	-	-	S	-	-	-	Domain of unknown function DUF1828
JAFFGJDM_01226	5.38e-125	-	-	-	S	ko:K16924	-	ko00000,ko00002,ko02000	UPF0397 protein
JAFFGJDM_01227	0.0	ykoD	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
JAFFGJDM_01228	2.58e-189	cbiQ	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt transport
JAFFGJDM_01229	9.9e-30	-	-	-	-	-	-	-	-
JAFFGJDM_01230	1.24e-93	ytwI	-	-	S	-	-	-	Protein of unknown function (DUF441)
JAFFGJDM_01231	0.0	citF	2.8.3.10	-	H	ko:K01643	ko02020,map02020	ko00000,ko00001,ko01000	Citrate (pro-3S)-lyase alpha chain
JAFFGJDM_01232	1.79e-214	citE	4.1.3.34	-	G	ko:K01644	ko02020,map02020	ko00000,ko00001,ko01000	Belongs to the HpcH HpaI aldolase family
JAFFGJDM_01233	1.6e-59	citD	-	-	C	ko:K01646	ko02020,map02020	ko00000,ko00001	Covalent carrier of the coenzyme of citrate lyase
JAFFGJDM_01234	5.17e-249	citC	6.2.1.22	-	H	ko:K01910	ko02020,map02020	ko00000,ko00001,ko01000	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
JAFFGJDM_01235	5.95e-197	-	-	-	I	-	-	-	Alpha/beta hydrolase family
JAFFGJDM_01236	0.0	citP	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
JAFFGJDM_01237	5.26e-171	-	-	-	H	-	-	-	Aldolase/RraA
JAFFGJDM_01238	7.92e-311	pepC4	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
JAFFGJDM_01239	1.66e-217	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
JAFFGJDM_01240	0.0	frdA	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
JAFFGJDM_01241	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
JAFFGJDM_01242	1.7e-117	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
JAFFGJDM_01243	3.87e-241	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JAFFGJDM_01244	2.16e-205	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
JAFFGJDM_01245	5.41e-225	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
JAFFGJDM_01246	0.0	aha1	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
JAFFGJDM_01247	1.86e-117	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JAFFGJDM_01248	8.21e-228	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
JAFFGJDM_01249	4.17e-314	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
JAFFGJDM_01250	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
JAFFGJDM_01251	1.58e-10	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
JAFFGJDM_01252	0.0	-	-	-	P	ko:K06148	-	ko00000,ko02000	ABC transporter
JAFFGJDM_01253	2.46e-48	-	-	-	-	-	-	-	-
JAFFGJDM_01255	1.46e-161	-	-	-	S	-	-	-	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
JAFFGJDM_01256	4.6e-113	-	-	-	K	-	-	-	GNAT family
JAFFGJDM_01257	5.25e-258	XK27_00915	-	-	C	-	-	-	Luciferase-like monooxygenase
JAFFGJDM_01258	3.66e-46	rbtT	-	-	P	ko:K13021	-	ko00000,ko02000	Major Facilitator Superfamily
JAFFGJDM_01259	1.83e-89	rbtT	-	-	P	ko:K13021	-	ko00000,ko02000	Major Facilitator Superfamily
JAFFGJDM_01260	2.81e-76	-	-	-	EGP	-	-	-	Major Facilitator
JAFFGJDM_01261	0.0	-	-	-	L	-	-	-	Plasmid pRiA4b ORF-3-like protein
JAFFGJDM_01262	1.63e-313	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
JAFFGJDM_01263	5.11e-152	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
JAFFGJDM_01264	1.53e-142	ltrA	-	-	S	-	-	-	Bacterial low temperature requirement A protein (LtrA)
JAFFGJDM_01265	4.83e-107	ybbB	-	-	S	-	-	-	Protein of unknown function (DUF1211)
JAFFGJDM_01266	5.75e-152	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
JAFFGJDM_01267	5.29e-256	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JAFFGJDM_01268	2.25e-137	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin synthase
JAFFGJDM_01269	8.41e-42	adh2	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
JAFFGJDM_01270	2.24e-71	ykoJ	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
JAFFGJDM_01271	1.5e-176	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
JAFFGJDM_01273	3.68e-176	ribD	1.1.1.193, 3.5.4.26	-	H	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	ko00000,ko00001,ko00002,ko01000	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JAFFGJDM_01274	3.05e-110	ribE	2.5.1.9	-	H	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Riboflavin synthase
JAFFGJDM_01275	3.61e-288	ribBA	3.5.4.25, 4.1.99.12	-	H	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
JAFFGJDM_01276	4.65e-101	ribH	2.5.1.78	-	H	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
JAFFGJDM_01277	1.32e-114	-	2.7.7.49	-	L	ko:K00986	-	ko00000,ko01000	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
JAFFGJDM_01278	1.16e-13	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
JAFFGJDM_01279	8.44e-300	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
JAFFGJDM_01280	4.36e-93	-	-	-	K	ko:K03827	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
JAFFGJDM_01281	1.21e-95	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
JAFFGJDM_01282	2.33e-130	-	-	-	S	ko:K07025	-	ko00000	Haloacid dehalogenase-like hydrolase
JAFFGJDM_01283	3.87e-15	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FMN_bind
JAFFGJDM_01284	1.63e-109	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
JAFFGJDM_01285	1.73e-227	-	-	-	S	-	-	-	Conserved hypothetical protein 698
JAFFGJDM_01287	1.21e-243	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
JAFFGJDM_01288	1.94e-130	-	-	-	I	-	-	-	PAP2 superfamily
JAFFGJDM_01289	1.23e-187	-	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
JAFFGJDM_01290	1.43e-310	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
JAFFGJDM_01291	3.73e-72	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
JAFFGJDM_01292	3.87e-16	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
JAFFGJDM_01293	2.08e-95	yfhC	-	-	C	-	-	-	nitroreductase
JAFFGJDM_01294	8.72e-258	pbg6	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
JAFFGJDM_01295	1.31e-56	pbg6	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
JAFFGJDM_01296	3.96e-39	pts23C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JAFFGJDM_01297	8.73e-252	pts23C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JAFFGJDM_01298	2.3e-169	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA
JAFFGJDM_01299	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
JAFFGJDM_01300	2.73e-92	-	-	-	S	-	-	-	Domain of unknown function (DUF3284)
JAFFGJDM_01301	1.64e-215	celD	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JAFFGJDM_01302	4.23e-46	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
JAFFGJDM_01303	4.06e-88	celD	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JAFFGJDM_01304	2.92e-79	-	-	-	-	-	-	-	-
JAFFGJDM_01305	7.88e-79	celC	2.7.1.196, 2.7.1.205	-	G	ko:K02759	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose Cellobiose specific IIA subunit
JAFFGJDM_01306	2.19e-73	pts20B	2.7.1.196, 2.7.1.205	-	G	ko:K02760	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
JAFFGJDM_01307	4.75e-29	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA domain
JAFFGJDM_01308	3.54e-94	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA domain
JAFFGJDM_01309	0.0	pbg4	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
JAFFGJDM_01310	2.06e-111	alkD	-	-	L	-	-	-	DNA alkylation repair enzyme
JAFFGJDM_01311	3.14e-226	iunH	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	inosine-uridine preferring nucleoside hydrolase
JAFFGJDM_01312	4.49e-108	-	-	-	-	-	-	-	-
JAFFGJDM_01313	1.83e-54	-	-	-	C	-	-	-	FMN_bind
JAFFGJDM_01314	0.0	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
JAFFGJDM_01315	4.2e-249	pbpX1	-	-	V	-	-	-	Beta-lactamase
JAFFGJDM_01316	2.48e-252	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JAFFGJDM_01317	9.03e-277	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
JAFFGJDM_01318	6.89e-185	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
JAFFGJDM_01319	3.66e-225	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JAFFGJDM_01320	3.29e-280	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
JAFFGJDM_01321	8.62e-105	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
JAFFGJDM_01322	1.39e-312	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
JAFFGJDM_01323	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
JAFFGJDM_01324	6.25e-246	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
JAFFGJDM_01325	1.27e-220	potE	-	-	E	-	-	-	Amino Acid
JAFFGJDM_01326	2.58e-48	potE	-	-	E	-	-	-	Amino Acid
JAFFGJDM_01327	1.59e-136	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
JAFFGJDM_01328	3.04e-297	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
JAFFGJDM_01329	2.49e-282	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
JAFFGJDM_01330	5.76e-287	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
JAFFGJDM_01331	5.43e-191	-	-	-	-	-	-	-	-
JAFFGJDM_01332	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JAFFGJDM_01333	7.11e-57	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
JAFFGJDM_01334	3.64e-46	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
JAFFGJDM_01335	2.57e-226	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
JAFFGJDM_01336	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
JAFFGJDM_01337	2.7e-126	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
JAFFGJDM_01338	1.42e-244	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
JAFFGJDM_01339	7.07e-107	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
JAFFGJDM_01340	5.21e-126	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
JAFFGJDM_01341	9.94e-71	ylbG	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2129)
JAFFGJDM_01342	3.91e-268	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
JAFFGJDM_01343	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
JAFFGJDM_01344	2.79e-131	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
JAFFGJDM_01345	5.22e-45	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
JAFFGJDM_01346	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JAFFGJDM_01347	1.75e-211	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
JAFFGJDM_01348	0.0	-	-	-	L	-	-	-	Nuclease-related domain
JAFFGJDM_01349	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
JAFFGJDM_01350	2.31e-148	-	-	-	S	-	-	-	repeat protein
JAFFGJDM_01351	4.7e-163	pgm	-	-	G	-	-	-	Phosphoglycerate mutase family
JAFFGJDM_01352	4.47e-278	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
JAFFGJDM_01353	9.98e-75	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
JAFFGJDM_01354	1.62e-276	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
JAFFGJDM_01355	2.05e-163	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JAFFGJDM_01356	1.22e-55	-	-	-	-	-	-	-	-
JAFFGJDM_01357	5.18e-134	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
JAFFGJDM_01358	2.32e-43	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
JAFFGJDM_01359	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
JAFFGJDM_01360	6.3e-138	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
JAFFGJDM_01361	4.01e-192	ylmH	-	-	S	-	-	-	S4 domain protein
JAFFGJDM_01362	2.42e-60	yggT	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
JAFFGJDM_01363	1.43e-96	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
JAFFGJDM_01364	2.52e-300	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JAFFGJDM_01365	3.3e-315	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
JAFFGJDM_01366	3.14e-194	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
JAFFGJDM_01367	3.88e-264	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JAFFGJDM_01368	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
JAFFGJDM_01369	4.43e-224	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JAFFGJDM_01370	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
JAFFGJDM_01371	6.55e-72	ftsL	-	-	D	-	-	-	Cell division protein FtsL
JAFFGJDM_01372	1.49e-223	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
JAFFGJDM_01373	5.63e-102	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
JAFFGJDM_01374	1.02e-72	-	-	-	S	-	-	-	Protein of unknown function (DUF3397)
JAFFGJDM_01375	1.4e-09	-	-	-	S	-	-	-	Protein of unknown function (DUF4044)
JAFFGJDM_01376	5.43e-122	mreD	-	-	-	ko:K03571	-	ko00000,ko03036	-
JAFFGJDM_01377	8.27e-189	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
JAFFGJDM_01378	8.26e-226	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
JAFFGJDM_01379	6.18e-150	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
JAFFGJDM_01380	1.06e-162	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
JAFFGJDM_01381	1.22e-306	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
JAFFGJDM_01382	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
JAFFGJDM_01383	2.91e-67	-	-	-	-	-	-	-	-
JAFFGJDM_01384	3.02e-166	-	-	-	S	ko:K06926	-	ko00000	AAA domain, putative AbiEii toxin, Type IV TA system
JAFFGJDM_01385	0.0	yoaB	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
JAFFGJDM_01386	9.25e-13	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
JAFFGJDM_01387	8.53e-59	-	-	-	-	-	-	-	-
JAFFGJDM_01388	3.33e-123	-	-	-	S	-	-	-	Protein of unknown function (DUF3990)
JAFFGJDM_01389	4.08e-218	yfdH	-	GT2	M	ko:K12999	-	ko00000,ko01000,ko01003,ko01005	Glycosyltransferase, group 2 family protein
JAFFGJDM_01390	4.31e-86	-	-	-	S	-	-	-	GtrA-like protein
JAFFGJDM_01391	3.97e-57	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
JAFFGJDM_01392	6.01e-153	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
JAFFGJDM_01393	2.1e-232	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
JAFFGJDM_01394	3.48e-288	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JAFFGJDM_01395	3.52e-272	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
JAFFGJDM_01396	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
JAFFGJDM_01397	3.07e-142	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
JAFFGJDM_01398	8.08e-110	-	-	-	S	-	-	-	Protein of unknown function (DUF1694)
JAFFGJDM_01399	1.47e-302	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
JAFFGJDM_01400	1.35e-56	-	-	-	-	-	-	-	-
JAFFGJDM_01401	9.45e-104	uspA	-	-	T	-	-	-	universal stress protein
JAFFGJDM_01402	1.18e-275	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
JAFFGJDM_01403	5.13e-46	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
JAFFGJDM_01404	1.59e-68	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
JAFFGJDM_01405	4.81e-227	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
JAFFGJDM_01406	2.54e-42	-	-	-	S	-	-	-	Protein of unknown function (DUF1146)
JAFFGJDM_01407	2.45e-93	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
JAFFGJDM_01408	0.0	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
JAFFGJDM_01409	1.48e-221	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
JAFFGJDM_01410	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
JAFFGJDM_01411	6.55e-120	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JAFFGJDM_01412	2.48e-83	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
JAFFGJDM_01413	4.83e-37	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JAFFGJDM_01414	5.87e-166	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
JAFFGJDM_01415	5.28e-146	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
JAFFGJDM_01416	1.66e-243	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
JAFFGJDM_01417	1.24e-198	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
JAFFGJDM_01418	6.6e-237	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
JAFFGJDM_01419	7.02e-146	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
JAFFGJDM_01420	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Domain of unknown function (DUF1727)
JAFFGJDM_01423	7.95e-250	ampC	-	-	V	-	-	-	Beta-lactamase
JAFFGJDM_01424	3.26e-274	-	-	-	EGP	-	-	-	Major Facilitator
JAFFGJDM_01425	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
JAFFGJDM_01426	5.3e-137	vanZ	-	-	V	-	-	-	VanZ like family
JAFFGJDM_01427	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
JAFFGJDM_01428	0.0	yclK	-	-	T	-	-	-	Histidine kinase
JAFFGJDM_01429	4.96e-167	-	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
JAFFGJDM_01430	9.01e-90	-	-	-	S	-	-	-	SdpI/YhfL protein family
JAFFGJDM_01431	1.93e-242	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
JAFFGJDM_01432	1.72e-288	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
JAFFGJDM_01433	1.21e-127	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
JAFFGJDM_01434	3.68e-14	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
JAFFGJDM_01435	6.88e-11	-	-	-	T	ko:K07172	-	ko00000,ko02048	SpoVT / AbrB like domain
JAFFGJDM_01437	1.94e-22	-	-	-	S	-	-	-	Domain of Unknown Function with PDB structure (DUF3850)
JAFFGJDM_01438	4.83e-125	-	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	VirC1 protein
JAFFGJDM_01440	3.03e-54	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
JAFFGJDM_01441	6.8e-48	-	-	-	S	ko:K19157	-	ko00000,ko01000,ko02048	Bacterial toxin of type II toxin-antitoxin system, YafQ
JAFFGJDM_01442	1.48e-95	-	-	-	V	-	-	-	Type I restriction modification DNA specificity domain
JAFFGJDM_01443	2.96e-176	-	-	-	V	-	-	-	N-6 DNA Methylase
JAFFGJDM_01444	5.95e-103	-	-	-	V	-	-	-	N-6 DNA Methylase
JAFFGJDM_01445	6.73e-129	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
JAFFGJDM_01446	1.71e-156	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
JAFFGJDM_01447	2.27e-33	-	-	-	GKT	-	-	-	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JAFFGJDM_01448	4.68e-25	-	2.7.1.200	-	G	ko:K02774	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
JAFFGJDM_01449	6.75e-256	-	-	-	G	ko:K02775	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
JAFFGJDM_01450	7.62e-32	-	2.7.1.200	-	G	ko:K02773	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JAFFGJDM_01452	1.78e-21	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
JAFFGJDM_01453	5.85e-67	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
JAFFGJDM_01455	1.54e-87	doc	-	-	S	ko:K07341	-	ko00000,ko02048	Fic/DOC family
JAFFGJDM_01456	2.78e-45	-	-	-	-	-	-	-	-
JAFFGJDM_01457	1.51e-27	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
JAFFGJDM_01459	3.25e-158	-	-	-	L	-	-	-	This gene contains a nucleotide ambiguity which may be the result of a sequencing error
JAFFGJDM_01461	1.33e-22	-	-	-	S	-	-	-	PemK-like, MazF-like toxin of type II toxin-antitoxin system
JAFFGJDM_01462	1.02e-32	-	-	-	L	ko:K07473	-	ko00000,ko02048	Addiction module antitoxin, RelB DinJ family
JAFFGJDM_01463	3.77e-54	-	-	-	E	-	-	-	Pfam:DUF955
JAFFGJDM_01464	3.71e-142	-	-	-	S	-	-	-	Fic/DOC family
JAFFGJDM_01465	4.2e-22	-	-	-	L	-	-	-	Psort location Cytoplasmic, score
JAFFGJDM_01466	2.64e-34	-	-	-	L	-	-	-	four-way junction helicase activity
JAFFGJDM_01475	2.23e-24	lysM	-	-	M	-	-	-	LysM domain
JAFFGJDM_01476	3.25e-194	-	-	-	S	-	-	-	COG0433 Predicted ATPase
JAFFGJDM_01480	2.26e-163	-	-	-	U	ko:K03205	ko03070,map03070	ko00000,ko00001,ko00002,ko02044	TraM recognition site of TraD and TraG
JAFFGJDM_01485	3.24e-13	-	-	-	S	-	-	-	SLAP domain
JAFFGJDM_01486	6.47e-10	-	-	-	M	-	-	-	oxidoreductase activity
JAFFGJDM_01488	3.56e-21	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	Sortase family
JAFFGJDM_01490	3.54e-15	-	-	-	S	-	-	-	SLAP domain
JAFFGJDM_01496	4.48e-10	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
JAFFGJDM_01498	9.34e-231	-	-	-	L	-	-	-	N-6 DNA Methylase
JAFFGJDM_01500	1.49e-47	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
JAFFGJDM_01501	6.57e-45	-	-	-	S	-	-	-	Phage derived protein Gp49-like (DUF891)
JAFFGJDM_01509	2.38e-32	-	-	-	S	-	-	-	Domain of unknown function (DUF771)
JAFFGJDM_01510	7.62e-41	-	-	-	K	-	-	-	Helix-turn-helix domain
JAFFGJDM_01511	4.74e-30	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix domain
JAFFGJDM_01512	6.66e-31	-	-	-	K	-	-	-	Helix-turn-helix domain
JAFFGJDM_01514	2.63e-194	int3	-	-	L	-	-	-	Belongs to the 'phage' integrase family
JAFFGJDM_01516	1.07e-281	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JAFFGJDM_01517	2.42e-238	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
JAFFGJDM_01518	3.69e-30	-	-	-	-	-	-	-	-
JAFFGJDM_01519	1.94e-100	-	-	-	U	ko:K02248	-	ko00000,ko00002,ko02044	Putative Competence protein ComGF
JAFFGJDM_01520	1.68e-55	-	-	-	-	-	-	-	-
JAFFGJDM_01521	8.19e-91	-	-	-	-	ko:K02246	-	ko00000,ko00002,ko02044	-
JAFFGJDM_01522	7.88e-63	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	competence protein ComGC
JAFFGJDM_01523	1.72e-222	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
JAFFGJDM_01524	5.04e-231	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
JAFFGJDM_01525	5.65e-171	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
JAFFGJDM_01526	2.33e-120	-	-	-	S	-	-	-	VanZ like family
JAFFGJDM_01527	1.49e-130	ylbE	-	-	GM	-	-	-	NAD(P)H-binding
JAFFGJDM_01528	3.96e-37	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
JAFFGJDM_01530	4.31e-204	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
JAFFGJDM_01531	2.15e-127	-	-	-	L	-	-	-	Helix-turn-helix domain
JAFFGJDM_01532	0.0	-	-	-	E	-	-	-	Amino acid permease
JAFFGJDM_01534	1.14e-99	-	-	-	M	-	-	-	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
JAFFGJDM_01535	1.96e-110	-	2.7.7.65	-	T	ko:K02488	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko00002,ko01000,ko02022	GGDEF domain
JAFFGJDM_01536	2.64e-46	-	-	-	-	-	-	-	-
JAFFGJDM_01537	5.05e-74	-	-	-	T	-	-	-	Putative diguanylate phosphodiesterase
JAFFGJDM_01538	5.12e-199	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
JAFFGJDM_01539	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
JAFFGJDM_01540	0.0	pts33BCA	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
JAFFGJDM_01541	8.39e-195	bglG5	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
JAFFGJDM_01542	2.52e-262	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
JAFFGJDM_01543	3.07e-112	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JAFFGJDM_01544	2.85e-153	-	-	-	-	-	-	-	-
JAFFGJDM_01545	3.23e-98	copY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Penicillinase repressor
JAFFGJDM_01546	8.04e-190	-	-	-	S	-	-	-	hydrolase
JAFFGJDM_01547	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JAFFGJDM_01548	4.54e-217	ybbR	-	-	S	-	-	-	YbbR-like protein
JAFFGJDM_01549	2.13e-194	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
JAFFGJDM_01550	3.46e-266	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
JAFFGJDM_01551	3.69e-170	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
JAFFGJDM_01552	6.51e-166	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
JAFFGJDM_01553	1.25e-263	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
JAFFGJDM_01554	2.84e-208	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
JAFFGJDM_01555	1.51e-127	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
JAFFGJDM_01556	4.82e-113	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
JAFFGJDM_01557	1.1e-232	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
JAFFGJDM_01558	1.64e-174	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
JAFFGJDM_01559	2.81e-200	ycsE	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
JAFFGJDM_01560	3.07e-124	-	-	-	-	-	-	-	-
JAFFGJDM_01561	1.18e-253	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
JAFFGJDM_01562	5.46e-183	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
JAFFGJDM_01563	2.86e-286	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
JAFFGJDM_01564	2.86e-244	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
JAFFGJDM_01565	9.26e-241	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	Putative sugar-binding domain
JAFFGJDM_01567	0.0	-	-	-	-	-	-	-	-
JAFFGJDM_01568	0.0	ycaM	-	-	E	-	-	-	amino acid
JAFFGJDM_01569	1.43e-178	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
JAFFGJDM_01570	7.65e-101	-	-	-	K	-	-	-	MerR HTH family regulatory protein
JAFFGJDM_01571	0.0	ycnB	-	-	U	-	-	-	Belongs to the major facilitator superfamily
JAFFGJDM_01572	4.64e-63	-	-	-	S	-	-	-	Domain of unknown function (DUF4811)
JAFFGJDM_01573	4.76e-168	ybbM	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
JAFFGJDM_01574	3.16e-144	ybbL	-	-	S	ko:K02068	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
JAFFGJDM_01575	0.0	-	-	-	S	-	-	-	SH3-like domain
JAFFGJDM_01576	1.16e-128	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
JAFFGJDM_01577	8.59e-221	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
JAFFGJDM_01578	2.78e-251	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
JAFFGJDM_01579	9.95e-211	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
JAFFGJDM_01580	1.55e-117	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
JAFFGJDM_01581	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
JAFFGJDM_01582	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
JAFFGJDM_01583	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
JAFFGJDM_01584	3.42e-232	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
JAFFGJDM_01585	3.31e-239	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
JAFFGJDM_01586	4.04e-203	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
JAFFGJDM_01587	3.54e-230	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
JAFFGJDM_01588	8.33e-27	-	-	-	-	-	-	-	-
JAFFGJDM_01589	2.24e-238	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
JAFFGJDM_01590	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
JAFFGJDM_01591	1.55e-122	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JAFFGJDM_01592	9.44e-169	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
JAFFGJDM_01593	2.68e-314	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
JAFFGJDM_01594	5.04e-154	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
JAFFGJDM_01595	1.94e-268	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	transferase
JAFFGJDM_01596	3.03e-293	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
JAFFGJDM_01597	1.17e-248	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
JAFFGJDM_01598	3.92e-123	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JAFFGJDM_01599	1.63e-154	ymfM	-	-	S	ko:K15539	-	ko00000	Helix-turn-helix domain
JAFFGJDM_01600	4.64e-170	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
JAFFGJDM_01601	5.49e-301	ymfH	-	-	S	-	-	-	Peptidase M16
JAFFGJDM_01602	1.47e-284	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
JAFFGJDM_01603	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
JAFFGJDM_01604	3.12e-91	-	-	-	S	-	-	-	Protein of unknown function (DUF1149)
JAFFGJDM_01605	2.12e-136	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
JAFFGJDM_01606	2.19e-270	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
JAFFGJDM_01607	1.99e-87	srlB	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
JAFFGJDM_01608	1.01e-255	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
JAFFGJDM_01609	3.77e-122	-	-	-	S	-	-	-	SNARE associated Golgi protein
JAFFGJDM_01610	0.0	mycA	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
JAFFGJDM_01611	7.96e-221	rluD2	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
JAFFGJDM_01612	1.57e-194	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JAFFGJDM_01613	1.7e-147	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
JAFFGJDM_01614	2.44e-143	-	-	-	S	-	-	-	CYTH
JAFFGJDM_01615	5.74e-148	yjbH	-	-	Q	-	-	-	Thioredoxin
JAFFGJDM_01616	2.63e-205	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
JAFFGJDM_01617	1.5e-178	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
JAFFGJDM_01618	6.28e-87	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
JAFFGJDM_01619	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JAFFGJDM_01620	1.29e-54	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
JAFFGJDM_01621	2.6e-37	-	-	-	-	-	-	-	-
JAFFGJDM_01622	0.0	clpE	-	-	O	ko:K03697	-	ko00000,ko03110	Belongs to the ClpA ClpB family
JAFFGJDM_01623	5.93e-60	XK27_09445	-	-	S	-	-	-	Domain of unknown function (DUF1827)
JAFFGJDM_01624	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
JAFFGJDM_01625	1.76e-181	hlyX	-	-	S	ko:K03699	-	ko00000,ko02042	Transporter associated domain
JAFFGJDM_01626	7.76e-98	-	-	-	-	-	-	-	-
JAFFGJDM_01627	1.74e-111	-	-	-	-	-	-	-	-
JAFFGJDM_01628	2.79e-185	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
JAFFGJDM_01629	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JAFFGJDM_01630	1.94e-150	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
JAFFGJDM_01631	1.84e-44	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
JAFFGJDM_01632	7.74e-61	-	-	-	-	-	-	-	-
JAFFGJDM_01633	4.42e-269	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
JAFFGJDM_01634	2.12e-273	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
JAFFGJDM_01635	3.22e-215	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
JAFFGJDM_01636	3.44e-209	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
JAFFGJDM_01637	9.98e-211	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
JAFFGJDM_01638	5.14e-105	ykuP	-	-	C	ko:K03839	-	ko00000	Flavodoxin
JAFFGJDM_01639	7.46e-113	gtcA1	-	-	S	-	-	-	Teichoic acid glycosylation protein
JAFFGJDM_01640	1.62e-278	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
JAFFGJDM_01642	3.76e-316	chbC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JAFFGJDM_01643	5.96e-283	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
JAFFGJDM_01644	2.16e-79	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
JAFFGJDM_01645	6.73e-78	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
JAFFGJDM_01646	2.22e-296	-	-	-	E	ko:K03294	-	ko00000	amino acid
JAFFGJDM_01647	7.32e-157	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
JAFFGJDM_01648	6.74e-269	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
JAFFGJDM_01649	5.83e-67	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
JAFFGJDM_01650	2.88e-113	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
JAFFGJDM_01651	0.0	-	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
JAFFGJDM_01652	8.59e-133	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
JAFFGJDM_01653	0.0	yhdP	-	-	S	-	-	-	Transporter associated domain
JAFFGJDM_01654	2.14e-154	-	-	-	C	-	-	-	nitroreductase
JAFFGJDM_01655	1.76e-52	-	-	-	-	-	-	-	-
JAFFGJDM_01656	1.96e-113	ptbA	2.7.1.208	-	G	ko:K02755,ko:K02777,ko:K20107,ko:K20108	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
JAFFGJDM_01657	1.52e-103	-	-	-	-	-	-	-	-
JAFFGJDM_01658	6.89e-190	glvR	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
JAFFGJDM_01659	0.0	glvC	2.7.1.208	-	G	ko:K02749,ko:K02750	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
JAFFGJDM_01660	7.44e-189	-	-	-	S	-	-	-	hydrolase
JAFFGJDM_01661	1.85e-205	-	-	-	S	-	-	-	Phospholipase, patatin family
JAFFGJDM_01662	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
JAFFGJDM_01663	4.44e-174	-	-	-	K	ko:K22103	-	ko00000,ko03000	DeoR C terminal sensor domain
JAFFGJDM_01664	2.9e-79	-	-	-	S	-	-	-	Enterocin A Immunity
JAFFGJDM_01665	3.18e-198	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
JAFFGJDM_01666	6.63e-174	gntR	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
JAFFGJDM_01667	1.01e-222	rihC	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
JAFFGJDM_01668	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
JAFFGJDM_01669	1.82e-161	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
JAFFGJDM_01670	8.52e-215	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JAFFGJDM_01671	7.29e-209	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
JAFFGJDM_01672	2.2e-308	srrA1	-	-	G	ko:K02027,ko:K17244	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
JAFFGJDM_01673	3.52e-296	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
JAFFGJDM_01674	2.09e-110	-	-	-	-	-	-	-	-
JAFFGJDM_01675	1.04e-211	-	-	-	S	-	-	-	Protein of unknown function (DUF2974)
JAFFGJDM_01676	3.65e-141	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
JAFFGJDM_01677	4.29e-122	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
JAFFGJDM_01678	3.39e-187	glnH	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
JAFFGJDM_01679	2.8e-173	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
JAFFGJDM_01680	2.72e-60	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Zeta toxin
JAFFGJDM_01681	5.43e-50	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Zeta toxin
JAFFGJDM_01682	8.41e-314	-	-	-	G	-	-	-	MFS/sugar transport protein
JAFFGJDM_01683	1.72e-129	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
JAFFGJDM_01684	0.0	XK27_09605	-	-	V	ko:K18892	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter transmembrane region
JAFFGJDM_01685	0.0	XK27_09600	-	-	V	ko:K06147,ko:K18891	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
JAFFGJDM_01686	7.27e-106	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
JAFFGJDM_01687	2.05e-188	peb1A	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
JAFFGJDM_01688	1.07e-165	-	-	-	F	-	-	-	glutamine amidotransferase
JAFFGJDM_01689	3.41e-312	steT	-	-	E	ko:K03294	-	ko00000	amino acid
JAFFGJDM_01690	3.97e-33	steT	-	-	E	ko:K03294	-	ko00000	amino acid
JAFFGJDM_01691	1.11e-256	steT	-	-	E	ko:K03294	-	ko00000	amino acid
JAFFGJDM_01692	1.53e-176	-	-	-	-	-	-	-	-
JAFFGJDM_01693	6.07e-223	ydhF	-	-	S	-	-	-	Aldo keto reductase
JAFFGJDM_01694	0.0	ykpA	-	-	S	-	-	-	ABC transporter, ATP-binding protein
JAFFGJDM_01695	2.33e-230	pepA	-	-	E	-	-	-	M42 glutamyl aminopeptidase
JAFFGJDM_01696	1.06e-195	pmrA	-	-	EGP	ko:K08161	-	ko00000,ko02000	MFS_1 like family
JAFFGJDM_01697	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
JAFFGJDM_01698	4.14e-115	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
JAFFGJDM_01699	7.85e-302	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
JAFFGJDM_01700	3.55e-28	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative DNA-binding domain
JAFFGJDM_01701	1.96e-127	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative DNA-binding domain
JAFFGJDM_01702	8.97e-47	-	-	-	-	-	-	-	-
JAFFGJDM_01703	5.94e-200	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
JAFFGJDM_01704	6.13e-110	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
JAFFGJDM_01705	6.61e-186	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
JAFFGJDM_01706	0.0	-	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
JAFFGJDM_01707	1.52e-119	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
JAFFGJDM_01708	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
JAFFGJDM_01713	1.42e-122	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
JAFFGJDM_01714	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JAFFGJDM_01715	1.01e-256	flp	-	-	V	-	-	-	Beta-lactamase
JAFFGJDM_01716	2.79e-309	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
JAFFGJDM_01717	9.92e-187	-	-	-	I	-	-	-	transferase activity, transferring acyl groups other than amino-acyl groups
JAFFGJDM_01718	1.46e-75	-	-	-	-	-	-	-	-
JAFFGJDM_01719	2.61e-148	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
JAFFGJDM_01720	5.58e-219	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
JAFFGJDM_01721	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JAFFGJDM_01722	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
JAFFGJDM_01723	5.42e-67	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JAFFGJDM_01724	6.25e-268	camS	-	-	S	-	-	-	sex pheromone
JAFFGJDM_01725	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JAFFGJDM_01726	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
JAFFGJDM_01727	2.26e-118	acmA	3.2.1.17, 3.2.1.96	-	NU	ko:K01185,ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	mannosyl-glycoprotein
JAFFGJDM_01729	2.62e-109	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
JAFFGJDM_01730	5.48e-173	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
JAFFGJDM_01731	0.0	epsU	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
JAFFGJDM_01732	9.16e-287	-	-	-	M	-	-	-	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
JAFFGJDM_01733	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
JAFFGJDM_01734	9.83e-261	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
JAFFGJDM_01735	1.91e-195	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
JAFFGJDM_01736	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JAFFGJDM_01737	1.03e-261	-	-	-	M	-	-	-	Glycosyl transferases group 1
JAFFGJDM_01738	3.02e-171	tagA	2.4.1.187	GT26	F	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
JAFFGJDM_01739	3.68e-93	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Glycerol-3-phosphate cytidylyltransferase
JAFFGJDM_01740	1.87e-159	gntR1	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
JAFFGJDM_01741	2.17e-232	-	-	-	-	-	-	-	-
JAFFGJDM_01742	1.15e-54	oppA2	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
JAFFGJDM_01743	9.12e-302	oppA2	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
JAFFGJDM_01746	4.41e-305	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	NADH oxidase
JAFFGJDM_01747	1.18e-13	-	-	-	-	-	-	-	-
JAFFGJDM_01748	6.39e-32	-	-	-	S	-	-	-	transposase or invertase
JAFFGJDM_01749	1.36e-308	slpX	-	-	S	-	-	-	SLAP domain
JAFFGJDM_01750	1.43e-186	-	-	-	K	-	-	-	SIS domain
JAFFGJDM_01751	3.01e-154	rpiA1	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
JAFFGJDM_01752	1.03e-237	XK27_10475	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
JAFFGJDM_01753	1.93e-266	araT	2.6.1.57	-	E	ko:K00832,ko:K00841	ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
JAFFGJDM_01755	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
JAFFGJDM_01757	2.67e-148	glpQ1	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
JAFFGJDM_01758	1.9e-153	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
JAFFGJDM_01759	9.01e-115	-	-	-	G	-	-	-	Histidine phosphatase superfamily (branch 1)
JAFFGJDM_01760	8.92e-136	-	-	-	G	-	-	-	Phosphoglycerate mutase family
JAFFGJDM_01761	5.68e-211	-	-	-	D	-	-	-	nuclear chromosome segregation
JAFFGJDM_01762	1.33e-130	-	-	-	M	-	-	-	LysM domain protein
JAFFGJDM_01763	2.57e-108	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JAFFGJDM_01764	6.31e-99	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JAFFGJDM_01765	1.83e-22	licC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JAFFGJDM_01766	1.25e-17	-	-	-	-	-	-	-	-
JAFFGJDM_01767	2.77e-220	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase
JAFFGJDM_01768	1.04e-41	-	-	-	-	-	-	-	-
JAFFGJDM_01770	3.65e-90	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
JAFFGJDM_01771	1.53e-145	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
JAFFGJDM_01772	4.51e-77	psiE	-	-	S	ko:K13256	-	ko00000	Phosphate-starvation-inducible E
JAFFGJDM_01774	5.4e-174	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
JAFFGJDM_01775	4.26e-290	amt	-	-	P	ko:K03320	-	ko00000,ko02000	ammonium transporter
JAFFGJDM_01776	7.82e-80	-	-	-	-	-	-	-	-
JAFFGJDM_01777	0.0	-	-	-	L	ko:K03724	-	ko00000,ko01000,ko03400	DEAD DEAH box helicase
JAFFGJDM_01778	2.14e-312	-	-	-	P	-	-	-	P-loop Domain of unknown function (DUF2791)
JAFFGJDM_01779	5.53e-173	-	-	-	S	-	-	-	TerB-C domain
JAFFGJDM_01780	1.23e-242	-	-	-	S	-	-	-	TerB-C domain
JAFFGJDM_01781	0.0	pckA	4.1.1.49	-	H	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Phosphoenolpyruvate carboxykinase
JAFFGJDM_01782	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
JAFFGJDM_01783	6.94e-202	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
JAFFGJDM_01784	9.05e-78	apfA	3.6.1.61	-	F	ko:K18445	ko00230,map00230	ko00000,ko00001,ko01000	Nudix hydrolase
JAFFGJDM_01785	3.36e-42	-	-	-	-	-	-	-	-
JAFFGJDM_01786	1.78e-100	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
JAFFGJDM_01787	5.26e-36	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
JAFFGJDM_01788	2.7e-277	mtlD	1.1.1.17	-	C	ko:K00009	ko00051,map00051	ko00000,ko00001,ko01000	mannitol-1-phosphate 5-dehydrogenase activity
JAFFGJDM_01789	5.75e-103	mtlF	2.7.1.197	-	G	ko:K02798	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JAFFGJDM_01790	0.0	mtlA	2.7.1.197	-	G	ko:K02799,ko:K02800	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
JAFFGJDM_01791	0.0	mtlR	-	-	K	ko:K03483	-	ko00000,ko03000	Mga helix-turn-helix domain
JAFFGJDM_01792	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
JAFFGJDM_01793	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
JAFFGJDM_01794	4.47e-58	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
JAFFGJDM_01795	1.13e-308	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
JAFFGJDM_01796	7.06e-111	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
JAFFGJDM_01797	2.07e-203	-	-	-	K	-	-	-	Transcriptional regulator
JAFFGJDM_01798	1.31e-81	-	-	-	S	-	-	-	Domain of unknown function (DUF956)
JAFFGJDM_01799	3.51e-222	manN	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	system, mannose fructose sorbose family IID component
JAFFGJDM_01800	9.65e-181	manY	-	-	G	ko:K02746,ko:K02795	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system
JAFFGJDM_01801	2.72e-236	manL	2.7.1.191	-	G	ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
JAFFGJDM_01803	3.48e-165	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
JAFFGJDM_01804	9.06e-184	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
JAFFGJDM_01805	1.44e-53	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
JAFFGJDM_01806	4.98e-37	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
JAFFGJDM_01807	0.0	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
JAFFGJDM_01808	1.23e-129	yjcK	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
JAFFGJDM_01809	3.2e-143	-	-	-	S	-	-	-	SNARE associated Golgi protein
JAFFGJDM_01810	1.77e-194	-	-	-	I	-	-	-	alpha/beta hydrolase fold
JAFFGJDM_01811	6.76e-80	plcR	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
JAFFGJDM_01812	4.06e-109	plcR	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
JAFFGJDM_01813	1.19e-19	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
JAFFGJDM_01814	1.41e-37	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
JAFFGJDM_01815	2.35e-117	-	-	-	F	-	-	-	Nucleoside 2-deoxyribosyltransferase
JAFFGJDM_01816	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
JAFFGJDM_01817	1.2e-220	-	-	-	-	-	-	-	-
JAFFGJDM_01818	1.86e-31	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
JAFFGJDM_01820	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
JAFFGJDM_01821	1.53e-127	yobS	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
JAFFGJDM_01822	1.89e-205	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
JAFFGJDM_01823	1.4e-207	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
JAFFGJDM_01824	2.12e-310	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
JAFFGJDM_01825	0.0	-	-	-	S	-	-	-	Zn-dependent metallo-hydrolase RNA specificity domain
JAFFGJDM_01826	5.62e-187	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
JAFFGJDM_01827	1.64e-202	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	ABC-type sugar transport systems, permease components
JAFFGJDM_01828	5.26e-259	malK	-	-	P	ko:K10112,ko:K17240	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
JAFFGJDM_01829	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
JAFFGJDM_01830	7.24e-204	endA	-	-	F	ko:K15051	-	ko00000	DNA RNA non-specific endonuclease
JAFFGJDM_01831	1.29e-230	-	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	EXOIII
JAFFGJDM_01832	5.11e-203	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
JAFFGJDM_01833	2.23e-150	yviA	-	-	S	-	-	-	Protein of unknown function (DUF421)
JAFFGJDM_01834	2.94e-74	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
JAFFGJDM_01835	7.8e-10	-	-	-	S	-	-	-	Protein of unknown function (DUF3290)
JAFFGJDM_01836	3.16e-179	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
JAFFGJDM_01837	4.53e-11	-	-	-	-	-	-	-	-
JAFFGJDM_01838	1.02e-75	-	-	-	-	-	-	-	-
JAFFGJDM_01839	2.62e-69	-	-	-	-	-	-	-	-
JAFFGJDM_01841	4.4e-165	-	-	-	S	-	-	-	PAS domain
JAFFGJDM_01842	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
JAFFGJDM_01843	1.28e-228	pepR	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
JAFFGJDM_01844	1.75e-168	-	-	-	T	-	-	-	Transcriptional regulatory protein, C terminal
JAFFGJDM_01845	2.37e-242	-	-	-	T	-	-	-	GHKL domain
JAFFGJDM_01846	2.88e-98	ykoJ	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
JAFFGJDM_01847	5.59e-109	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
JAFFGJDM_01848	8e-108	XK27_03150	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
JAFFGJDM_01849	8.64e-85	yybA	-	-	K	-	-	-	Transcriptional regulator
JAFFGJDM_01850	2.91e-83	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter transmembrane region
JAFFGJDM_01851	1.13e-201	-	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter transmembrane region
JAFFGJDM_01852	0.0	oppA	-	-	E	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter, substratebinding protein
JAFFGJDM_01853	1.73e-79	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
JAFFGJDM_01854	1.45e-36	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
JAFFGJDM_01855	2.15e-299	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
JAFFGJDM_01856	1.24e-75	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
JAFFGJDM_01857	1.48e-134	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JAFFGJDM_01858	1.95e-218	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
JAFFGJDM_01859	1.88e-125	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
JAFFGJDM_01860	1.36e-96	yjcF	-	-	S	-	-	-	Acetyltransferase (GNAT) domain
JAFFGJDM_01861	7.09e-184	aatB	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
JAFFGJDM_01862	9.78e-136	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
JAFFGJDM_01863	3e-139	yecS_2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
JAFFGJDM_01864	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
JAFFGJDM_01865	1.51e-150	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
JAFFGJDM_01866	7.53e-163	gpm2	-	-	G	-	-	-	Phosphoglycerate mutase family
JAFFGJDM_01867	1.87e-308	-	-	-	S	-	-	-	response to antibiotic
JAFFGJDM_01868	1.34e-162	-	-	-	-	-	-	-	-
JAFFGJDM_01869	0.0	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
JAFFGJDM_01870	6.28e-87	-	2.7.1.191	-	G	ko:K02793	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system fructose IIA component
JAFFGJDM_01871	1.42e-57	-	-	-	-	-	-	-	-
JAFFGJDM_01872	4.65e-14	-	-	-	-	-	-	-	-
JAFFGJDM_01873	7.81e-238	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase, type I
JAFFGJDM_01874	8.28e-176	-	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
JAFFGJDM_01875	0.0	malH	3.2.1.122	GH4	G	ko:K01232	ko00500,map00500	ko00000,ko00001,ko01000	Family 4 glycosyl hydrolase C-terminal domain
JAFFGJDM_01876	8.75e-197	-	-	-	-	-	-	-	-
JAFFGJDM_01877	3.32e-13	-	-	-	-	-	-	-	-
JAFFGJDM_01878	5.45e-121	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
JAFFGJDM_01879	5.6e-135	-	-	-	K	ko:K06977	-	ko00000	acetyltransferase
JAFFGJDM_01882	4.92e-20	-	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
JAFFGJDM_01883	1.23e-58	-	-	-	S	-	-	-	polysaccharide biosynthetic process
JAFFGJDM_01884	6.06e-41	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
JAFFGJDM_01885	8.06e-08	-	-	-	S	ko:K07011	-	ko00000	Glycosyltransferase like family 2
JAFFGJDM_01887	9.92e-152	cps3J	-	-	M	-	-	-	Domain of unknown function (DUF4422)
JAFFGJDM_01888	2.91e-140	epsE2	-	-	M	-	-	-	Bacterial sugar transferase
JAFFGJDM_01889	2.22e-184	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
JAFFGJDM_01890	5.61e-160	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
JAFFGJDM_01891	5.52e-187	epsB	-	-	M	-	-	-	biosynthesis protein
JAFFGJDM_01892	8.14e-241	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
JAFFGJDM_01894	6.72e-285	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JAFFGJDM_01895	1.26e-223	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
JAFFGJDM_01896	3.01e-54	-	-	-	-	-	-	-	-
JAFFGJDM_01897	1.73e-167	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
JAFFGJDM_01898	1.28e-174	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
JAFFGJDM_01899	1.47e-114	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
JAFFGJDM_01900	4.26e-115	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase homologues.
JAFFGJDM_01901	4.52e-56	-	-	-	-	-	-	-	-
JAFFGJDM_01902	0.0	-	-	-	S	-	-	-	O-antigen ligase like membrane protein
JAFFGJDM_01903	8.77e-144	-	-	-	-	-	-	-	-
JAFFGJDM_01904	1.57e-282	tnpB	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
JAFFGJDM_01905	4.75e-101	nrdI	-	-	F	ko:K03647	-	ko00000	NrdI Flavodoxin like
JAFFGJDM_01906	1.96e-226	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JAFFGJDM_01907	1.16e-101	-	-	-	-	-	-	-	-
JAFFGJDM_01908	1.58e-143	-	-	-	S	-	-	-	Peptidase_C39 like family
JAFFGJDM_01909	7.36e-109	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
JAFFGJDM_01910	7.35e-174	-	-	-	S	-	-	-	Putative threonine/serine exporter
JAFFGJDM_01911	0.0	-	-	-	S	-	-	-	ABC transporter
JAFFGJDM_01912	2.52e-76	-	-	-	-	-	-	-	-
JAFFGJDM_01913	8.69e-93	rimL	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
JAFFGJDM_01914	5.49e-46	-	-	-	-	-	-	-	-
JAFFGJDM_01915	7.2e-40	-	-	-	-	-	-	-	-
JAFFGJDM_01916	2.33e-143	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
JAFFGJDM_01917	5.74e-256	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
JAFFGJDM_01918	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
JAFFGJDM_01919	7.27e-42	-	-	-	-	-	-	-	-
JAFFGJDM_01920	1.47e-91	doc	-	-	S	ko:K07341	-	ko00000,ko02048	Prophage maintenance system killer protein
JAFFGJDM_01922	1.13e-35	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
JAFFGJDM_01923	0.000868	-	-	-	-	-	-	-	-
JAFFGJDM_01924	2.04e-277	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
JAFFGJDM_01925	6.6e-115	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
JAFFGJDM_01926	0.0	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
JAFFGJDM_01927	1.59e-172	znuB	-	-	U	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
JAFFGJDM_01928	1.63e-152	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
JAFFGJDM_01929	9.9e-209	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
JAFFGJDM_01930	4.47e-56	-	-	-	K	ko:K21903	-	ko00000,ko03000	helix_turn_helix, Arsenical Resistance Operon Repressor
JAFFGJDM_01931	0.0	fruA	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase System
JAFFGJDM_01932	2.18e-215	pfkB	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family. LacC subfamily
JAFFGJDM_01933	3.14e-175	fruR	-	-	K	ko:K03436	-	ko00000,ko03000	DeoR C terminal sensor domain
JAFFGJDM_01934	6.39e-279	natB	-	-	CP	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
JAFFGJDM_01935	3.09e-212	natA	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
JAFFGJDM_01936	3.41e-88	-	-	-	-	-	-	-	-
JAFFGJDM_01937	2.52e-32	-	-	-	-	-	-	-	-
JAFFGJDM_01938	6.32e-42	-	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
JAFFGJDM_01939	4.74e-107	-	-	-	-	-	-	-	-
JAFFGJDM_01940	7.87e-30	-	-	-	-	-	-	-	-
JAFFGJDM_01943	5.02e-180	blpT	-	-	-	-	-	-	-
JAFFGJDM_01944	7.86e-138	mesE	-	-	M	ko:K12293,ko:K20345	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko02000	Transport protein ComB
JAFFGJDM_01945	1.85e-141	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
JAFFGJDM_01946	0.0	comA	-	-	V	ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024	ko00000,ko00001,ko01000,ko02000	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
JAFFGJDM_01947	2.08e-164	-	-	-	K	ko:K07707	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko02022	LytTr DNA-binding domain
JAFFGJDM_01948	1.04e-94	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
JAFFGJDM_01949	6.42e-73	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
JAFFGJDM_01950	1.89e-23	-	-	-	-	-	-	-	-
JAFFGJDM_01951	0.0	-	-	-	S	ko:K06921	-	ko00000	Archaea bacterial proteins of unknown function
JAFFGJDM_01952	0.0	agl	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
JAFFGJDM_01953	0.0	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
JAFFGJDM_01954	4.48e-34	-	-	-	-	-	-	-	-
JAFFGJDM_01955	1.07e-35	-	-	-	-	-	-	-	-
JAFFGJDM_01956	1.95e-45	-	-	-	-	-	-	-	-
JAFFGJDM_01957	6.94e-70	-	-	-	S	-	-	-	Enterocin A Immunity
JAFFGJDM_01958	7.79e-186	racD	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
JAFFGJDM_01959	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JAFFGJDM_01960	9.28e-271	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
JAFFGJDM_01961	8.32e-157	vanR	-	-	K	-	-	-	response regulator
JAFFGJDM_01963	0.0	ndvA	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
JAFFGJDM_01964	1.68e-179	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter, ATP-binding protein
JAFFGJDM_01965	1.22e-190	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter, ATP-binding protein
JAFFGJDM_01966	3.93e-176	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
JAFFGJDM_01967	6.88e-257	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
JAFFGJDM_01968	1.1e-59	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
JAFFGJDM_01969	4.28e-197	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
JAFFGJDM_01970	4.99e-178	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
JAFFGJDM_01971	5.86e-191	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
JAFFGJDM_01972	3.66e-166	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
JAFFGJDM_01973	2.12e-86	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
JAFFGJDM_01974	2.99e-75	cvpA	-	-	S	-	-	-	Colicin V production protein
JAFFGJDM_01976	5.24e-230	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
JAFFGJDM_01977	9.48e-194	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
JAFFGJDM_01978	2.58e-126	azr	1.5.1.36	-	S	ko:K22394	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
JAFFGJDM_01979	3.41e-125	azo1	1.5.1.36, 1.7.1.6	-	S	ko:K03206,ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
JAFFGJDM_01980	1.25e-143	-	-	-	K	-	-	-	WHG domain
JAFFGJDM_01981	2.63e-50	-	-	-	-	-	-	-	-
JAFFGJDM_01982	0.0	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
JAFFGJDM_01983	2.12e-132	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
JAFFGJDM_01984	1.05e-233	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
JAFFGJDM_01985	1.45e-119	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
JAFFGJDM_01986	2.75e-143	-	-	-	G	-	-	-	phosphoglycerate mutase
JAFFGJDM_01987	9.79e-181	-	-	-	S	ko:K06889	-	ko00000	Alpha/beta hydrolase family
JAFFGJDM_01988	1.45e-183	XK27_08125	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
JAFFGJDM_01989	1.19e-29	-	-	-	-	-	-	-	-
JAFFGJDM_01990	7.91e-102	-	-	-	-	-	-	-	-
JAFFGJDM_01991	9.18e-202	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
JAFFGJDM_01992	2.94e-250	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
JAFFGJDM_01993	2.61e-23	-	-	-	-	-	-	-	-
JAFFGJDM_01994	1.05e-119	-	-	-	S	-	-	-	membrane
JAFFGJDM_01995	5.3e-92	-	-	-	K	-	-	-	LytTr DNA-binding domain
JAFFGJDM_01996	6.93e-34	-	-	-	S	-	-	-	Sugar efflux transporter for intercellular exchange
JAFFGJDM_01997	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
JAFFGJDM_01998	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
JAFFGJDM_01999	2.2e-79	lysM	-	-	M	-	-	-	LysM domain
JAFFGJDM_02000	7.62e-223	-	-	-	-	-	-	-	-
JAFFGJDM_02001	6.74e-212	mdtG2	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
JAFFGJDM_02002	1.27e-58	mdtG2	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
JAFFGJDM_02003	1.86e-114	ymdB	-	-	S	-	-	-	Macro domain protein
JAFFGJDM_02005	1.14e-89	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
JAFFGJDM_02009	4.73e-84	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
JAFFGJDM_02010	1.39e-197	malG	-	-	P	ko:K15772	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
JAFFGJDM_02011	0.0	malF	-	-	P	ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
JAFFGJDM_02012	2.73e-282	-	-	-	G	ko:K15770	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
JAFFGJDM_02013	2.85e-266	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
JAFFGJDM_02014	7.7e-149	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
JAFFGJDM_02015	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
JAFFGJDM_02016	0.0	nplT	3.2.1.133, 3.2.1.135, 3.2.1.54	GH13	G	ko:K01208	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
JAFFGJDM_02017	0.0	malA1	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain
JAFFGJDM_02018	4.13e-99	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
JAFFGJDM_02019	9.42e-261	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JAFFGJDM_02020	9.04e-230	yvdE	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
JAFFGJDM_02021	7.48e-188	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
JAFFGJDM_02022	0.0	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
JAFFGJDM_02023	3.66e-186	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
JAFFGJDM_02024	1.74e-248	-	-	-	G	-	-	-	Transmembrane secretion effector
JAFFGJDM_02025	5.63e-171	-	-	-	V	-	-	-	ABC transporter transmembrane region
JAFFGJDM_02026	3.65e-285	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
JAFFGJDM_02027	1.83e-91	-	-	-	V	-	-	-	ABC transporter transmembrane region
JAFFGJDM_02028	6.69e-84	-	-	-	L	-	-	-	RelB antitoxin
JAFFGJDM_02029	1.51e-168	cobQ	-	-	S	ko:K07009	-	ko00000	glutamine amidotransferase
JAFFGJDM_02030	8.6e-108	-	-	-	M	-	-	-	NlpC/P60 family
JAFFGJDM_02033	1.02e-200	-	-	-	-	-	-	-	-
JAFFGJDM_02034	1.03e-07	-	-	-	-	-	-	-	-
JAFFGJDM_02035	5.51e-47	-	-	-	-	-	-	-	-
JAFFGJDM_02036	4.48e-206	-	-	-	EG	-	-	-	EamA-like transporter family
JAFFGJDM_02037	3.18e-209	-	-	-	EG	-	-	-	EamA-like transporter family
JAFFGJDM_02038	3.75e-178	yicL	-	-	EG	-	-	-	EamA-like transporter family
JAFFGJDM_02039	1.32e-137	-	-	-	-	-	-	-	-
JAFFGJDM_02040	9.07e-143	-	-	-	-	-	-	-	-
JAFFGJDM_02041	1.84e-238	-	-	-	S	-	-	-	DUF218 domain
JAFFGJDM_02042	0.0	yheS_2	-	-	S	ko:K18231,ko:K19349	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ATPases associated with a variety of cellular activities
JAFFGJDM_02043	6.77e-111	-	-	-	-	-	-	-	-
JAFFGJDM_02044	1.09e-74	-	-	-	-	-	-	-	-
JAFFGJDM_02045	7.26e-35	-	-	-	S	-	-	-	Protein conserved in bacteria
JAFFGJDM_02046	2.27e-71	-	-	-	S	-	-	-	protein encoded in hypervariable junctions of pilus gene clusters
JAFFGJDM_02047	1.01e-38	-	-	-	S	-	-	-	HicA toxin of bacterial toxin-antitoxin,
JAFFGJDM_02048	7.13e-313	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JAFFGJDM_02049	0.0	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
JAFFGJDM_02050	1.35e-238	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
JAFFGJDM_02053	1.84e-263	-	4.2.1.126	-	S	ko:K07106,ko:K09963	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Bacterial protein of unknown function (DUF871)
JAFFGJDM_02054	5.12e-242	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
JAFFGJDM_02055	6.45e-291	-	-	-	E	-	-	-	amino acid
JAFFGJDM_02056	6.65e-179	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
JAFFGJDM_02058	1.95e-221	-	-	-	V	-	-	-	HNH endonuclease
JAFFGJDM_02059	6.36e-173	-	-	-	S	-	-	-	PFAM Archaeal ATPase
JAFFGJDM_02060	5.27e-314	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
JAFFGJDM_02061	2.58e-310	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
JAFFGJDM_02062	5.08e-149	sipS3	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
JAFFGJDM_02063	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	AAA domain (Cdc48 subfamily)
JAFFGJDM_02064	7.86e-212	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
JAFFGJDM_02065	3.09e-304	pts13C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JAFFGJDM_02066	1.68e-161	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
JAFFGJDM_02067	0.0	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
JAFFGJDM_02068	1.96e-49	-	-	-	-	-	-	-	-
JAFFGJDM_02069	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
JAFFGJDM_02070	1.34e-183	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
JAFFGJDM_02071	2.5e-172	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
JAFFGJDM_02072	1.97e-227	pbpX2	-	-	V	-	-	-	Beta-lactamase
JAFFGJDM_02073	6.8e-316	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
JAFFGJDM_02074	4.98e-48	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JAFFGJDM_02075	2.95e-304	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
JAFFGJDM_02076	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JAFFGJDM_02077	1.3e-26	-	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
JAFFGJDM_02078	1.42e-58	-	-	-	-	-	-	-	-
JAFFGJDM_02079	5.11e-265	-	-	-	S	-	-	-	Membrane
JAFFGJDM_02080	3.41e-107	ykuL	-	-	S	-	-	-	(CBS) domain
JAFFGJDM_02081	0.0	cadA	-	-	P	-	-	-	P-type ATPase
JAFFGJDM_02082	5.71e-263	napA	-	-	P	-	-	-	Sodium/hydrogen exchanger family
JAFFGJDM_02083	2.49e-63	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
JAFFGJDM_02084	1.68e-55	yoeB	-	-	S	ko:K19158	-	ko00000,ko01000,ko02048	YoeB-like toxin of bacterial type II toxin-antitoxin system
JAFFGJDM_02085	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
JAFFGJDM_02086	1.91e-200	mutR	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
JAFFGJDM_02087	1.05e-67	-	-	-	-	-	-	-	-
JAFFGJDM_02088	3.62e-202	-	-	-	EGP	-	-	-	Major facilitator Superfamily
JAFFGJDM_02089	8.6e-141	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Transcriptional regulator
JAFFGJDM_02090	3.43e-155	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
JAFFGJDM_02091	5.14e-248	-	-	-	S	-	-	-	DUF218 domain
JAFFGJDM_02092	0.0	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
JAFFGJDM_02093	0.0	ppc	4.1.1.31	-	H	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
JAFFGJDM_02094	5.9e-130	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
JAFFGJDM_02095	1.97e-255	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
JAFFGJDM_02096	4.57e-232	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
JAFFGJDM_02097	0.0	mglA	3.6.3.17	-	S	ko:K02056,ko:K06400	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
JAFFGJDM_02098	8.8e-262	mglC	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
JAFFGJDM_02099	3.63e-221	yufQ	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
JAFFGJDM_02100	3.08e-205	-	-	-	S	-	-	-	Aldo/keto reductase family
JAFFGJDM_02101	1.15e-173	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
JAFFGJDM_02102	9.85e-154	dak	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
JAFFGJDM_02103	1.06e-159	dgk2	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
JAFFGJDM_02104	6.64e-94	-	-	-	-	-	-	-	-
JAFFGJDM_02105	2.56e-179	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
JAFFGJDM_02106	9.69e-292	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
JAFFGJDM_02107	3.85e-97	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
JAFFGJDM_02108	4.03e-75	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
JAFFGJDM_02109	8.34e-116	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
JAFFGJDM_02110	1.64e-45	-	-	-	-	-	-	-	-
JAFFGJDM_02111	3.31e-154	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
JAFFGJDM_02112	3.82e-294	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
JAFFGJDM_02113	3.69e-54	-	-	-	L	ko:K07473	-	ko00000,ko02048	Addiction module antitoxin, RelB DinJ family
JAFFGJDM_02114	5.05e-11	-	-	-	-	-	-	-	-
JAFFGJDM_02115	3.58e-61	-	-	-	S	ko:K07124	-	ko00000	Enoyl-(Acyl carrier protein) reductase
JAFFGJDM_02116	2.18e-122	yneE	-	-	K	-	-	-	Transcriptional regulator
JAFFGJDM_02117	1.92e-80	yneE	-	-	K	-	-	-	Transcriptional regulator
JAFFGJDM_02118	9.01e-287	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
JAFFGJDM_02119	8.73e-187	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
JAFFGJDM_02120	1.28e-292	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
JAFFGJDM_02121	7.23e-50	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
JAFFGJDM_02122	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
JAFFGJDM_02123	2.27e-179	-	-	-	-	-	-	-	-
JAFFGJDM_02127	2.23e-48	-	-	-	-	-	-	-	-
JAFFGJDM_02128	2.52e-76	-	-	-	S	-	-	-	Cupredoxin-like domain
JAFFGJDM_02129	4.44e-65	-	-	-	S	-	-	-	Cupredoxin-like domain
JAFFGJDM_02130	0.0	copA	3.6.3.3, 3.6.3.5, 3.6.3.54	-	P	ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
JAFFGJDM_02131	6.63e-147	crp2	-	-	K	ko:K10914,ko:K21562	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	ko00000,ko00001,ko03000	helix_turn_helix, cAMP Regulatory protein
JAFFGJDM_02132	7.41e-136	-	-	-	-	-	-	-	-
JAFFGJDM_02133	1.03e-65	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
JAFFGJDM_02134	2.71e-222	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
JAFFGJDM_02135	6.46e-27	-	-	-	-	-	-	-	-
JAFFGJDM_02136	6.49e-268	-	-	-	-	-	-	-	-
JAFFGJDM_02137	6.57e-175	-	-	-	S	-	-	-	SLAP domain
JAFFGJDM_02138	1.14e-154	-	-	-	S	-	-	-	SLAP domain
JAFFGJDM_02139	1.06e-133	-	-	-	S	-	-	-	Bacteriocin helveticin-J
JAFFGJDM_02140	2.35e-58	-	-	-	-	-	-	-	-
JAFFGJDM_02141	8.29e-76	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
JAFFGJDM_02142	1.98e-41	-	-	-	E	-	-	-	Zn peptidase
JAFFGJDM_02143	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
JAFFGJDM_02144	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
JAFFGJDM_02145	5.38e-39	-	-	-	-	-	-	-	-
JAFFGJDM_02146	0.0	pox1	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
JAFFGJDM_02147	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
JAFFGJDM_02148	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
JAFFGJDM_02149	3.37e-192	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
JAFFGJDM_02150	2.65e-81	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
JAFFGJDM_02151	3.26e-23	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family
JAFFGJDM_02152	4e-107	-	-	-	S	-	-	-	Baseplate J-like protein
JAFFGJDM_02155	1.08e-92	-	-	-	-	-	-	-	-
JAFFGJDM_02161	1.58e-09	-	-	-	S	-	-	-	Phage uncharacterised protein (Phage_XkdX)
JAFFGJDM_02164	1.28e-22	-	-	-	-	-	-	-	-
JAFFGJDM_02165	1.66e-36	-	-	-	-	-	-	-	-
JAFFGJDM_02166	2e-232	-	-	-	M	-	-	-	Glycosyl hydrolases family 25
JAFFGJDM_02168	4.47e-26	-	-	-	-	-	-	-	-
JAFFGJDM_02169	2.16e-38	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
JAFFGJDM_02170	1.79e-74	-	-	-	L	-	-	-	Resolvase, N-terminal
JAFFGJDM_02171	4.18e-208	-	-	-	L	ko:K07496	-	ko00000	Putative transposase DNA-binding domain
JAFFGJDM_02172	6.33e-221	ulaG	-	-	S	ko:K03476	ko00053,ko01100,ko01120,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Beta-lactamase superfamily domain
JAFFGJDM_02173	4.93e-80	-	2.7.1.194	-	G	ko:K02821	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JAFFGJDM_02174	6.58e-293	sgaT	-	-	S	ko:K03475	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sugar-specific permease component
JAFFGJDM_02175	4.82e-42	ulaB	2.7.1.194	-	G	ko:K02822	ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system, Lactose/Cellobiose specific IIB subunit
JAFFGJDM_02176	2.85e-115	ulaD	4.1.1.85, 4.1.2.43	-	G	ko:K03078,ko:K08093	ko00030,ko00040,ko00053,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00040,map00053,map00680,map01100,map01120,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Orotidine 5'-phosphate decarboxylase / HUMPS family
JAFFGJDM_02177	1.78e-163	sga	5.1.3.22	-	G	ko:K03079	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Xylose isomerase-like TIM barrel
JAFFGJDM_02178	1.52e-157	araD	5.1.3.4	-	G	ko:K03077	ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120	ko00000,ko00001,ko00002,ko01000	links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
JAFFGJDM_02179	5.85e-86	nt5e	3.1.3.18	-	L	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	ko00000,ko00001,ko01000	haloacid dehalogenase-like hydrolase
JAFFGJDM_02180	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
JAFFGJDM_02181	1.01e-22	-	-	-	L	-	-	-	Transposase
JAFFGJDM_02182	7.51e-16	-	-	-	L	-	-	-	Transposase
JAFFGJDM_02183	3.76e-18	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
JAFFGJDM_02184	4.39e-268	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
JAFFGJDM_02185	2.22e-113	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
JAFFGJDM_02187	7.72e-09	-	-	-	M	-	-	-	Host cell surface-exposed lipoprotein
JAFFGJDM_02189	3.24e-24	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
JAFFGJDM_02190	2.18e-24	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
JAFFGJDM_02191	1.38e-121	-	-	-	S	-	-	-	DNA binding
JAFFGJDM_02197	4.49e-42	-	-	-	S	-	-	-	Helix-turn-helix domain
JAFFGJDM_02198	2.12e-24	-	-	-	-	-	-	-	-
JAFFGJDM_02200	1.07e-58	-	-	-	-	-	-	-	-
JAFFGJDM_02201	3.17e-161	-	-	-	S	-	-	-	Protein of unknown function (DUF1351)
JAFFGJDM_02202	5.44e-168	-	-	-	S	-	-	-	ERF superfamily
JAFFGJDM_02203	4.02e-140	-	-	-	L	-	-	-	Helix-turn-helix domain
JAFFGJDM_02211	1.87e-273	XK27_11280	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score
JAFFGJDM_02217	2.21e-13	-	-	-	L	ko:K07474	-	ko00000	Terminase small subunit
JAFFGJDM_02218	9.67e-251	-	-	-	S	-	-	-	Terminase-like family
JAFFGJDM_02219	4.77e-165	-	-	-	S	ko:K09961	-	ko00000	Protein of unknown function (DUF1073)
JAFFGJDM_02220	7.9e-55	-	-	-	S	-	-	-	Phage Mu protein F like protein
JAFFGJDM_02222	1.1e-83	-	-	-	S	ko:K09960	-	ko00000	Uncharacterized protein conserved in bacteria (DUF2213)
JAFFGJDM_02224	5.88e-118	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2184)
JAFFGJDM_02226	4.78e-23	-	-	-	-	-	-	-	-
JAFFGJDM_02227	5.58e-34	-	-	-	-	-	-	-	-
JAFFGJDM_02229	4.55e-127	-	-	-	S	-	-	-	Protein of unknown function (DUF3383)
JAFFGJDM_02230	5.24e-38	-	-	-	-	-	-	-	-
JAFFGJDM_02233	5.88e-51	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
JAFFGJDM_02234	3.93e-05	-	-	-	-	-	-	-	-
JAFFGJDM_02236	5.84e-21	-	-	-	S	-	-	-	protein disulfide oxidoreductase activity
JAFFGJDM_02237	6.19e-16	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
JAFFGJDM_02245	1.13e-65	-	-	-	S	-	-	-	Protein of unknown function (DUF1351)
JAFFGJDM_02246	8.94e-55	-	-	-	S	-	-	-	ERF superfamily
JAFFGJDM_02248	1.36e-13	xre	-	-	K	-	-	-	sequence-specific DNA binding
JAFFGJDM_02250	5.95e-24	radC	-	-	E	ko:K03630	-	ko00000	Belongs to the UPF0758 family
JAFFGJDM_02256	9.64e-54	-	-	-	Q	-	-	-	methyltransferase
JAFFGJDM_02261	7.58e-90	-	-	-	S	-	-	-	ORF6C domain
JAFFGJDM_02263	3.69e-15	-	-	-	S	-	-	-	VRR_NUC
JAFFGJDM_02270	1.96e-195	-	-	-	KL	-	-	-	DNA methylase
JAFFGJDM_02273	9.54e-228	-	-	-	S	-	-	-	Terminase-like family
JAFFGJDM_02274	1.64e-110	-	-	-	S	ko:K09961	-	ko00000	Protein of unknown function (DUF1073)
JAFFGJDM_02275	4.71e-70	-	-	-	S	-	-	-	Phage Mu protein F like protein
JAFFGJDM_02276	9.61e-28	-	-	-	S	-	-	-	Lysin motif
JAFFGJDM_02277	7.53e-73	-	-	-	S	ko:K09960	-	ko00000	Uncharacterized protein conserved in bacteria (DUF2213)
JAFFGJDM_02278	8.98e-25	-	-	-	-	-	-	-	-
JAFFGJDM_02280	4.47e-35	-	-	-	S	-	-	-	Protein of unknown function (DUF4054)
JAFFGJDM_02281	5.56e-22	-	-	-	-	-	-	-	-
JAFFGJDM_02284	8.17e-168	-	-	-	S	-	-	-	Protein of unknown function (DUF3383)
JAFFGJDM_02288	1.18e-95	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	domain protein
JAFFGJDM_02290	5.89e-316	ade	3.5.4.2	-	F	ko:K01486	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	Adenine deaminase C-terminal domain
JAFFGJDM_02291	1.22e-195	-	-	-	P	ko:K02055	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
JAFFGJDM_02292	4.48e-174	potA11	3.6.3.30	-	P	ko:K02010,ko:K02052	ko02010,ko02024,map02010,map02024	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
JAFFGJDM_02293	7.05e-146	potC3	-	-	E	ko:K02053	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
JAFFGJDM_02295	4.97e-45	-	3.6.3.2, 3.6.3.6, 3.6.3.8	-	P	ko:K01531,ko:K01535,ko:K01537,ko:K12952	ko00190,map00190	ko00000,ko00001,ko01000	cation transport ATPase
JAFFGJDM_02296	0.0	-	3.6.3.6	-	P	ko:K01535	ko00190,map00190	ko00000,ko00001,ko01000	Cation transporter/ATPase, N-terminus
JAFFGJDM_02297	2.52e-06	-	-	-	D	-	-	-	Domain of Unknown Function (DUF1542)
JAFFGJDM_02298	3.53e-35	-	-	-	C	ko:K21832	-	ko00000	nitric oxide dioxygenase activity
JAFFGJDM_02299	1.47e-287	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
JAFFGJDM_02300	4.43e-179	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	FeS assembly ATPase SufC
JAFFGJDM_02301	6.22e-232	sufD	-	-	O	ko:K07033,ko:K09015	-	ko00000	FeS assembly protein SufD
JAFFGJDM_02302	1.39e-224	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JAFFGJDM_02303	6.98e-78	nifU	-	-	C	ko:K04488	-	ko00000	SUF system FeS assembly protein, NifU family
JAFFGJDM_02304	0.0	sufB	-	-	O	ko:K07033,ko:K09014	-	ko00000	assembly protein SufB
JAFFGJDM_02305	1.64e-59	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
JAFFGJDM_02306	1.27e-311	mntH	-	-	P	ko:K03322	-	ko00000,ko02000	H( )-stimulated, divalent metal cation uptake system
JAFFGJDM_02307	1.81e-22	repA	-	-	S	-	-	-	Replication initiator protein A (RepA) N-terminus
JAFFGJDM_02308	6.72e-165	-	-	-	-	-	-	-	-
JAFFGJDM_02309	5.13e-70	-	-	-	-	-	-	-	-
JAFFGJDM_02311	3.64e-218	-	-	-	D	-	-	-	ftsk spoiiie
JAFFGJDM_02313	2.45e-64	-	-	-	-	-	-	-	-
JAFFGJDM_02314	4.62e-101	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Transcriptional regulator
JAFFGJDM_02318	4.45e-42	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2188)
JAFFGJDM_02319	1.74e-119	-	-	-	-	-	-	-	-
JAFFGJDM_02320	1.25e-248	-	-	-	K	-	-	-	IrrE N-terminal-like domain
JAFFGJDM_02323	4.63e-250	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
JAFFGJDM_02324	1.62e-96	-	-	-	M	-	-	-	LysM domain
JAFFGJDM_02325	3.3e-42	-	-	-	-	-	-	-	-
JAFFGJDM_02327	2.58e-45	-	-	-	-	-	-	-	-
JAFFGJDM_02328	7.84e-95	-	-	-	EGP	-	-	-	Major Facilitator
JAFFGJDM_02329	9.16e-301	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
JAFFGJDM_02330	1.48e-139	-	-	-	EGP	-	-	-	Major Facilitator
JAFFGJDM_02331	1.08e-161	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
JAFFGJDM_02332	5.88e-212	repA	-	-	S	-	-	-	Replication initiator protein A
JAFFGJDM_02333	4.65e-184	-	-	-	D	-	-	-	AAA domain
JAFFGJDM_02334	1.17e-38	-	-	-	-	-	-	-	-
JAFFGJDM_02335	4.87e-96	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
JAFFGJDM_02336	6.91e-92	-	-	-	L	-	-	-	IS1381, transposase OrfA
JAFFGJDM_02337	1.07e-141	tnpR1	-	-	L	-	-	-	Resolvase, N terminal domain
JAFFGJDM_02338	4.26e-22	-	-	-	L	ko:K07467	-	ko00000	Replication initiation factor
JAFFGJDM_02339	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JAFFGJDM_02340	5.23e-97	nrdI	-	-	F	ko:K03647	-	ko00000	NrdI Flavodoxin like
JAFFGJDM_02341	1.48e-249	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JAFFGJDM_02342	5.34e-77	tnpR1	-	-	L	-	-	-	Resolvase, N terminal domain
JAFFGJDM_02343	6.41e-34	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JAFFGJDM_02344	7.44e-129	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
JAFFGJDM_02345	1.31e-159	aapA	-	-	M	-	-	-	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
JAFFGJDM_02347	1.71e-154	-	-	-	L	ko:K07459	-	ko00000	AAA ATPase domain
JAFFGJDM_02348	1.61e-145	-	-	-	L	-	-	-	UvrD/REP helicase N-terminal domain
JAFFGJDM_02350	1.39e-143	adh2	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
JAFFGJDM_02351	5.71e-230	-	3.6.4.12	-	K	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Putative ATP-dependent DNA helicase recG C-terminal
JAFFGJDM_02352	7.13e-67	-	-	-	K	-	-	-	helix_turn_helix gluconate operon transcriptional repressor
JAFFGJDM_02353	1.53e-189	-	5.2.1.13	-	Q	ko:K09835	ko00906,ko01100,ko01110,map00906,map01100,map01110	ko00000,ko00001,ko00002,ko01000	HI0933-like protein
JAFFGJDM_02354	3.43e-79	-	-	-	C	-	-	-	2Fe-2S iron-sulfur cluster binding domain
JAFFGJDM_02356	0.0	-	-	-	L	-	-	-	AAA domain
JAFFGJDM_02357	6.84e-15	-	-	-	V	-	-	-	Abi-like protein
JAFFGJDM_02358	1.93e-56	-	-	-	L	-	-	-	Transposase DDE domain
JAFFGJDM_02359	0.0	XK27_00340	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
JAFFGJDM_02360	2.24e-29	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
JAFFGJDM_02361	1.5e-93	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
JAFFGJDM_02362	9e-104	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
JAFFGJDM_02363	1.44e-164	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
JAFFGJDM_02364	4.67e-54	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
JAFFGJDM_02365	9.07e-51	-	-	-	S	-	-	-	CRISPR-associated protein (Cas_Csn2)
JAFFGJDM_02366	4.63e-32	-	-	-	-	-	-	-	-
JAFFGJDM_02367	6.72e-177	-	-	-	EP	-	-	-	Plasmid replication protein
JAFFGJDM_02368	2.23e-99	-	-	-	S	-	-	-	helix_turn_helix, Deoxyribose operon repressor
JAFFGJDM_02369	0.0	cas9	-	-	L	ko:K09952	-	ko00000,ko01000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
JAFFGJDM_02370	1.87e-127	-	-	-	-	-	-	-	-
JAFFGJDM_02371	9.82e-61	-	-	-	-	-	-	-	-
JAFFGJDM_02372	1.64e-19	-	-	-	-	-	-	-	-
JAFFGJDM_02373	2.58e-39	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
JAFFGJDM_02374	6.05e-202	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
JAFFGJDM_02375	1.28e-168	-	-	-	L	-	-	-	PFAM transposase IS116 IS110 IS902
JAFFGJDM_02376	0.0	-	-	-	L	-	-	-	Transposase DDE domain
JAFFGJDM_02377	6.59e-296	-	-	-	L	-	-	-	Transposase DDE domain
JAFFGJDM_02378	9.13e-157	-	-	-	L	-	-	-	PFAM transposase IS116 IS110 IS902
JAFFGJDM_02379	1.08e-229	-	-	-	L	-	-	-	DDE superfamily endonuclease
JAFFGJDM_02380	1.86e-243	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
JAFFGJDM_02382	4.61e-37	-	-	-	S	-	-	-	Enterocin A Immunity
JAFFGJDM_02385	2.09e-105	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
JAFFGJDM_02386	5.35e-170	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
JAFFGJDM_02387	7.52e-221	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase