ORF_ID e_value Gene_name EC_number CAZy COGs KEGG_ko KEGG_Pathway BRITE Description
GDBFNOLI_00001 0.0 yybT - - T - - - signaling protein consisting of a modified GGDEF domain and a DHH domain
GDBFNOLI_00002 3.87e-97 rplI - - J ko:K02939 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
GDBFNOLI_00003 0.0 dnaB 3.6.4.12 - L ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Participates in initiation and elongation during chromosome replication
GDBFNOLI_00004 1.94e-217 phnD - - P ko:K02044 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, phosphonate, periplasmic substrate-binding protein
GDBFNOLI_00005 2.36e-217 degV1 - - S - - - DegV family
GDBFNOLI_00006 1.07e-171 - - - V - - - ABC transporter transmembrane region
GDBFNOLI_00007 5.79e-214 scrK 2.7.1.4 - GK ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 ko00000,ko00001,ko01000 ROK family
GDBFNOLI_00008 3.81e-18 - - - S - - - CsbD-like
GDBFNOLI_00009 2.26e-31 - - - S - - - Transglycosylase associated protein
GDBFNOLI_00010 5.32e-285 - - - I - - - Protein of unknown function (DUF2974)
GDBFNOLI_00011 4.38e-150 - - - S ko:K07507 - ko00000,ko02000 MgtC family
GDBFNOLI_00014 7.2e-84 - - - - - - - -
GDBFNOLI_00015 7.06e-110 - - - - - - - -
GDBFNOLI_00016 1.36e-171 - - - D - - - Ftsk spoiiie family protein
GDBFNOLI_00017 1.74e-185 - - - S - - - Replication initiation factor
GDBFNOLI_00018 1.33e-72 - - - - - - - -
GDBFNOLI_00019 4.04e-36 - - - - - - - -
GDBFNOLI_00020 5.85e-81 - - - L - - - Belongs to the 'phage' integrase family
GDBFNOLI_00021 1.68e-165 - - - L - - - Belongs to the 'phage' integrase family
GDBFNOLI_00022 3.21e-65 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
GDBFNOLI_00023 8.25e-65 - - - V ko:K01990,ko:K01992 - ko00000,ko00002,ko02000 Transport permease protein
GDBFNOLI_00025 2.01e-85 sagB - - C - - - Nitroreductase family
GDBFNOLI_00026 1.71e-128 - - - M - - - Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
GDBFNOLI_00027 1.09e-148 tnpA1 - - L - - - PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
GDBFNOLI_00028 3.26e-292 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
GDBFNOLI_00029 3e-118 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
GDBFNOLI_00030 2.54e-225 ydbI - - K - - - AI-2E family transporter
GDBFNOLI_00031 1.95e-134 - - - E - - - GDSL-like Lipase/Acylhydrolase
GDBFNOLI_00032 2.55e-26 - - - - - - - -
GDBFNOLI_00033 1.06e-311 - - - G ko:K16211 - ko00000,ko02000 Major Facilitator
GDBFNOLI_00034 2.81e-102 - - - E - - - Zn peptidase
GDBFNOLI_00035 1.53e-54 - - - K - - - Helix-turn-helix XRE-family like proteins
GDBFNOLI_00036 7.61e-59 - - - - - - - -
GDBFNOLI_00037 1.08e-79 - - - S - - - Bacteriocin helveticin-J
GDBFNOLI_00038 3.56e-85 - - - S - - - SLAP domain
GDBFNOLI_00039 8.58e-60 - - - - - - - -
GDBFNOLI_00040 8.64e-176 XK27_08845 - - S ko:K05833 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
GDBFNOLI_00041 4.76e-168 XK27_08840 - - U ko:K05832 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
GDBFNOLI_00042 3.35e-223 ABC-SBP - - S ko:K01989 - ko00000,ko00002,ko02000 ABC transporter
GDBFNOLI_00043 6.95e-50 - - - L - - - Transposase and inactivated derivatives, IS30 family
GDBFNOLI_00044 7.75e-170 ysaA 3.1.3.5, 3.8.1.2 - S ko:K01560,ko:K07025,ko:K08723 ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
GDBFNOLI_00045 7.93e-63 - - - P ko:K03284 - ko00000,ko02000 CorA-like Mg2+ transporter protein
GDBFNOLI_00046 5.49e-97 - - - P ko:K03284 - ko00000,ko02000 CorA-like Mg2+ transporter protein
GDBFNOLI_00047 9.52e-205 yvgN - - C - - - Aldo keto reductase
GDBFNOLI_00048 0.0 fusA1 - - J - - - elongation factor G
GDBFNOLI_00049 3.16e-192 - 3.1.3.102, 3.1.3.104 - S ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 haloacid dehalogenase-like hydrolase
GDBFNOLI_00050 3.74e-180 - - - EGP - - - Major Facilitator Superfamily
GDBFNOLI_00052 2.62e-95 B4168_4126 - - L ko:K07493 - ko00000 Transposase
GDBFNOLI_00053 6.14e-107 - - - - - - - -
GDBFNOLI_00054 1.67e-95 - - - K - - - Transcriptional regulator, MarR family
GDBFNOLI_00055 8.44e-65 - 4.2.1.59 - I ko:K02372 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
GDBFNOLI_00056 9.89e-112 fabH 2.3.1.180 - I ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
GDBFNOLI_00057 1.98e-47 fabH 2.3.1.180 - I ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
GDBFNOLI_00058 4.22e-41 acpP - - IQ ko:K02078 - ko00000,ko00001 Carrier of the growing fatty acid chain in fatty acid biosynthesis
GDBFNOLI_00059 2.77e-177 fabD 2.3.1.39 - I ko:K00645,ko:K15327,ko:K15329 ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004,ko01008 Malonyl CoA-acyl carrier protein transacylase
GDBFNOLI_00060 1.4e-137 fabG 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 reductase
GDBFNOLI_00061 2.53e-268 fabF 2.3.1.179 - I ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
GDBFNOLI_00062 3.17e-67 accB - - I ko:K02160 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
GDBFNOLI_00063 7.28e-80 fabZ 4.2.1.59 - I ko:K02372 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 FabA-like domain
GDBFNOLI_00064 1.4e-299 accC 6.3.4.14, 6.4.1.2 - I ko:K01961 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Acetyl-CoA carboxylase biotin carboxylase subunit
GDBFNOLI_00065 4.9e-180 accD 2.1.3.15, 6.4.1.2 - I ko:K01963 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
GDBFNOLI_00066 2.42e-163 accA 2.1.3.15, 6.4.1.2 - I ko:K01962 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 alpha subunit
GDBFNOLI_00067 1.9e-158 fabI 1.3.1.10, 1.3.1.9 - I ko:K00208 ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Enoyl- acyl-carrier-protein reductase NADH
GDBFNOLI_00068 7.01e-103 birA 6.3.4.15 - H ko:K03524 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko01000,ko03000 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
GDBFNOLI_00069 2.27e-245 ldhA 1.1.1.28 - C ko:K03778,ko:K18347 ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020 ko00000,ko00001,ko00002,ko01000,ko01504 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GDBFNOLI_00070 1.44e-07 - - - S - - - YSIRK type signal peptide
GDBFNOLI_00072 1.2e-202 xth 3.1.11.2 - L ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 exodeoxyribonuclease III
GDBFNOLI_00073 0.0 - - - E ko:K20265 ko02024,map02024 ko00000,ko00001,ko02000 amino acid
GDBFNOLI_00074 0.0 - - - L - - - Helicase C-terminal domain protein
GDBFNOLI_00075 6.72e-261 pbpX - - V - - - Beta-lactamase
GDBFNOLI_00076 1.05e-289 - - - N ko:K09384 - ko00000 Uncharacterized conserved protein (DUF2075)
GDBFNOLI_00077 4.19e-92 def2 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins
GDBFNOLI_00079 3.11e-13 tnpA1 - - L - - - PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
GDBFNOLI_00080 1.38e-107 - - - J - - - FR47-like protein
GDBFNOLI_00081 3.37e-50 - - - S - - - Cytochrome B5
GDBFNOLI_00082 3.92e-215 arbZ - - I - - - Phosphate acyltransferases
GDBFNOLI_00083 5.48e-235 - - - M - - - Glycosyl transferase family 8
GDBFNOLI_00084 1.91e-236 - - - M - - - Glycosyl transferase family 8
GDBFNOLI_00085 7.23e-201 arbx - - M - - - Glycosyl transferase family 8
GDBFNOLI_00086 4.19e-192 - - - I - - - Acyl-transferase
GDBFNOLI_00088 1.09e-46 - - - - - - - -
GDBFNOLI_00090 3.98e-169 yycF - - K ko:K07668 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 response regulator
GDBFNOLI_00091 0.0 vicK 2.7.13.3 - T ko:K07652 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
GDBFNOLI_00092 0.0 yycH - - S - - - YycH protein
GDBFNOLI_00093 1.01e-189 yycI - - S - - - YycH protein
GDBFNOLI_00094 1.19e-188 vicX 3.1.26.11 - S ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 domain protein
GDBFNOLI_00095 3.17e-224 htrA 3.4.21.107 - O ko:K04771 ko01503,ko02020,map01503,map02020 ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 serine protease
GDBFNOLI_00096 8.64e-107 rlmH 2.1.1.177 - J ko:K00783 - ko00000,ko01000,ko03009 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
GDBFNOLI_00097 1.93e-32 - - - G - - - Peptidase_C39 like family
GDBFNOLI_00098 2.16e-207 - - - M - - - NlpC/P60 family
GDBFNOLI_00099 6.67e-115 - - - G - - - Peptidase_C39 like family
GDBFNOLI_00100 1.09e-223 pepI 3.4.11.5 - E ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 Releases the N-terminal proline from various substrates
GDBFNOLI_00101 1.19e-114 - - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Cobalt transport protein
GDBFNOLI_00102 0.0 - - - S ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
GDBFNOLI_00103 1.05e-222 - - - K - - - helix_turn_helix, arabinose operon control protein
GDBFNOLI_00104 1.16e-207 htpX - - O ko:K03799 - ko00000,ko00002,ko01000,ko01002 Belongs to the peptidase M48B family
GDBFNOLI_00105 1.43e-125 lemA - - S ko:K03744 - ko00000 LemA family
GDBFNOLI_00106 3.01e-198 ysdE - - P - - - Citrate transporter
GDBFNOLI_00107 3.34e-92 - - - S - - - Iron-sulphur cluster biosynthesis
GDBFNOLI_00108 0.0 glpQ 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 Membrane domain of glycerophosphoryl diester phosphodiesterase
GDBFNOLI_00109 9.69e-25 - - - - - - - -
GDBFNOLI_00110 4.75e-239 - - - M - - - Glycosyl transferase
GDBFNOLI_00111 3.67e-225 - - - G - - - Glycosyl hydrolases family 8
GDBFNOLI_00112 1.11e-154 yfbR - - S ko:K07023 - ko00000 HD containing hydrolase-like enzyme
GDBFNOLI_00113 2.42e-204 - - - L - - - HNH nucleases
GDBFNOLI_00114 1.4e-191 yhaH - - S - - - Protein of unknown function (DUF805)
GDBFNOLI_00115 2.89e-173 glnQ - - E ko:K17076 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
GDBFNOLI_00116 0.0 XK27_05795 - - P ko:K17073,ko:K17074 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
GDBFNOLI_00117 1.41e-155 yxlJ 3.2.2.21 - L ko:K03652 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Belongs to the DNA glycosylase MPG family
GDBFNOLI_00118 7.63e-85 yeaO - - S - - - Protein of unknown function, DUF488
GDBFNOLI_00119 1.14e-164 terC - - P - - - Integral membrane protein TerC family
GDBFNOLI_00120 1.25e-119 adaB 2.1.1.63 - L ko:K00567,ko:K10778,ko:K13531 - ko00000,ko01000,ko03000,ko03400 6-O-methylguanine DNA methyltransferase, DNA binding domain
GDBFNOLI_00121 1.24e-169 cobB - - K ko:K12410 - ko00000,ko01000 SIR2 family
GDBFNOLI_00123 2.29e-112 - - - - - - - -
GDBFNOLI_00124 0.0 cls - - I ko:K06131 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GDBFNOLI_00125 1.24e-232 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
GDBFNOLI_00126 5.07e-190 rnhA 3.1.26.4 - L ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GDBFNOLI_00127 9.18e-187 - - - S - - - Protein of unknown function (DUF1002)
GDBFNOLI_00128 2.62e-199 epsV - - S - - - glycosyl transferase family 2
GDBFNOLI_00129 5.29e-164 - - - S - - - Alpha/beta hydrolase family
GDBFNOLI_00130 2.32e-47 - - - - - - - -
GDBFNOLI_00131 1.76e-233 prs2 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GDBFNOLI_00132 8.37e-161 - - - K - - - Bacterial regulatory proteins, tetR family
GDBFNOLI_00133 1.11e-177 - - - - - - - -
GDBFNOLI_00134 0.0 glnPH2 - - P ko:K02029,ko:K02030 - ko00000,ko00002,ko02000 ABC transporter permease
GDBFNOLI_00135 1.01e-170 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
GDBFNOLI_00136 7.36e-291 - - - S - - - Cysteine-rich secretory protein family
GDBFNOLI_00137 2.43e-263 ddl 6.3.2.4 - F ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Belongs to the D-alanine--D-alanine ligase family
GDBFNOLI_00138 2.45e-164 - - - - - - - -
GDBFNOLI_00139 6.89e-258 yibE - - S - - - overlaps another CDS with the same product name
GDBFNOLI_00140 2.23e-166 yibF - - S - - - overlaps another CDS with the same product name
GDBFNOLI_00141 4.67e-200 - - - I - - - alpha/beta hydrolase fold
GDBFNOLI_00142 0.0 - - - G - - - Belongs to the glycosyl hydrolase 31 family
GDBFNOLI_00143 3.75e-278 nagA 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Belongs to the metallo-dependent hydrolases superfamily. NagA family
GDBFNOLI_00145 1.14e-115 ntd 2.4.2.6 - F ko:K08728 ko00240,map00240 ko00000,ko00001,ko01000 Nucleoside
GDBFNOLI_00146 7.6e-113 - 2.7.1.200, 2.7.1.204 - G ko:K02773,ko:K20112 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GDBFNOLI_00147 3.56e-191 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
GDBFNOLI_00148 2.65e-108 usp5 - - T - - - universal stress protein
GDBFNOLI_00150 1.78e-212 phnD - - P ko:K02044 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphonate ABC transporter
GDBFNOLI_00151 6.34e-180 phnC 3.6.3.28 - P ko:K02041 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
GDBFNOLI_00152 1.91e-168 phnB - - P ko:K02042 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDBFNOLI_00153 1.29e-190 - - - P ko:K02042 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDBFNOLI_00154 7.05e-103 - - - L - - - COG3385 FOG Transposase and inactivated derivatives
GDBFNOLI_00155 1.87e-220 - - - L - - - COG3385 FOG Transposase and inactivated derivatives
GDBFNOLI_00156 5.61e-138 tag 3.2.2.20 - L ko:K01246 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 glycosylase
GDBFNOLI_00157 5.18e-109 - - - - - - - -
GDBFNOLI_00158 0.0 - - - S - - - Calcineurin-like phosphoesterase
GDBFNOLI_00159 0.0 asnB 6.3.5.4 - E ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 ko00000,ko00001,ko01000,ko01002 Asparagine synthase
GDBFNOLI_00160 0.0 yxbA 6.3.1.12 - S ko:K17810 - ko00000,ko01000 ATP-grasp enzyme
GDBFNOLI_00161 0.0 nrdD 1.1.98.6 - F ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Ribonucleoside-triphosphate reductase
GDBFNOLI_00162 1.35e-180 nrdG 1.97.1.4 - O ko:K04068 - ko00000,ko01000 Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GDBFNOLI_00163 1.69e-132 yitW - - S - - - Iron-sulfur cluster assembly protein
GDBFNOLI_00164 2.19e-292 XK27_04775 - - S ko:K09155 - ko00000 PAS domain
GDBFNOLI_00165 5.67e-278 yqjV - - EGP - - - Major Facilitator Superfamily
GDBFNOLI_00166 0.0 pepO - - O ko:K07386 - ko00000,ko01000,ko01002 Peptidase family M13
GDBFNOLI_00167 2.38e-138 pepO - - O ko:K07386 - ko00000,ko01000,ko01002 Peptidase family M13
GDBFNOLI_00168 0.0 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
GDBFNOLI_00169 6.55e-97 - - - - - - - -
GDBFNOLI_00170 3.75e-48 - - - S - - - PFAM Archaeal ATPase
GDBFNOLI_00172 4.53e-76 - - - T ko:K07171 - ko00000,ko01000,ko02048 PemK-like, MazF-like toxin of type II toxin-antitoxin system
GDBFNOLI_00173 3.61e-60 - - - - - - - -
GDBFNOLI_00174 1.21e-40 - - - - - - - -
GDBFNOLI_00175 1.05e-54 - - - S - - - Protein of unknown function (DUF2922)
GDBFNOLI_00176 3.2e-135 - - - S - - - SLAP domain
GDBFNOLI_00177 6.87e-27 - - - S - - - PD-(D/E)XK nuclease family transposase
GDBFNOLI_00179 5.32e-190 - - - S - - - PD-(D/E)XK nuclease family transposase
GDBFNOLI_00181 8.49e-100 - - - K - - - DNA-templated transcription, initiation
GDBFNOLI_00182 2.85e-54 - - - - - - - -
GDBFNOLI_00184 1.3e-162 - - - S - - - SLAP domain
GDBFNOLI_00186 1.47e-286 - - - NU - - - Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
GDBFNOLI_00187 8.93e-233 - 3.2.1.96, 3.5.1.28 GH73 M ko:K01227,ko:K01447,ko:K13714,ko:K13731 ko00511,ko05100,map00511,map05100 ko00000,ko00001,ko01000 N-acetylmuramoyl-L-alanine amidase
GDBFNOLI_00188 0.0 yjbQ - - P ko:K03455,ko:K03499 - ko00000,ko02000 TrkA C-terminal domain protein
GDBFNOLI_00189 2.47e-138 pcp 3.4.19.3 - O ko:K01304 - ko00000,ko01000,ko01002 Removes 5-oxoproline from various penultimate amino acid residues except L-proline
GDBFNOLI_00190 1.68e-207 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
GDBFNOLI_00191 1.98e-168 - - - - - - - -
GDBFNOLI_00192 1.72e-149 - - - - - - - -
GDBFNOLI_00193 4.51e-171 gpmA 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GDBFNOLI_00194 5.18e-128 - - - G - - - Aldose 1-epimerase
GDBFNOLI_00195 2.92e-258 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
GDBFNOLI_00196 1.03e-145 plsY1 2.3.1.15 - I ko:K08591 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
GDBFNOLI_00197 0.0 XK27_08315 - - M - - - Sulfatase
GDBFNOLI_00198 0.0 - - - S - - - Fibronectin type III domain
GDBFNOLI_00199 7.03e-307 tyrS 6.1.1.1 - J ko:K01866 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
GDBFNOLI_00200 9.39e-71 - - - - - - - -
GDBFNOLI_00202 0.0 pepC2 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 aminopeptidase
GDBFNOLI_00203 1.77e-157 ypgQ - - S ko:K06950 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
GDBFNOLI_00204 0.0 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
GDBFNOLI_00205 0.0 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
GDBFNOLI_00206 1.08e-265 guaB 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
GDBFNOLI_00207 1.34e-191 oppB - - P ko:K15581 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC-type dipeptide oligopeptide nickel transport systems, permease components
GDBFNOLI_00208 6.71e-241 oppC - - EP ko:K15582 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC-type dipeptide oligopeptide nickel transport systems, permease components
GDBFNOLI_00209 6.08e-253 oppD - - P ko:K02031,ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
GDBFNOLI_00210 6.54e-222 oppF - - P ko:K10823 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
GDBFNOLI_00211 0.0 pepE 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 aminopeptidase
GDBFNOLI_00212 8.35e-94 hsp - - O ko:K13993 ko04141,map04141 ko00000,ko00001,ko03110 Belongs to the small heat shock protein (HSP20) family
GDBFNOLI_00213 2.02e-38 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GDBFNOLI_00214 1.67e-143 - - - - - - - -
GDBFNOLI_00216 1.66e-143 - - - E - - - Belongs to the SOS response-associated peptidase family
GDBFNOLI_00217 4.07e-245 trpS 6.1.1.2 - J ko:K01867 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
GDBFNOLI_00218 4.29e-116 comEB 3.5.4.12 - F ko:K01493 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko02044 MafB19-like deaminase
GDBFNOLI_00219 4.57e-135 - - - S ko:K06872 - ko00000 TPM domain
GDBFNOLI_00220 1.71e-173 mgtA 3.6.3.2 - P ko:K01531 - ko00000,ko01000 COG0474 Cation transport ATPase
GDBFNOLI_00221 0.0 mgtA 3.6.3.2 - P ko:K01531 - ko00000,ko01000 COG0474 Cation transport ATPase
GDBFNOLI_00222 0.0 metG 6.1.1.10 - J ko:K01874 ko00450,ko00970,map00450,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GDBFNOLI_00223 2.72e-189 tatD - - L ko:K03424 - ko00000,ko01000 hydrolase, TatD family
GDBFNOLI_00224 5.17e-129 rnmV 3.1.26.8 - J ko:K05985 - ko00000,ko01000 Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
GDBFNOLI_00225 2.56e-193 ksgA 2.1.1.182 - J ko:K02528 - ko00000,ko01000,ko03009 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
GDBFNOLI_00226 9.99e-53 veg - - S - - - Biofilm formation stimulator VEG
GDBFNOLI_00227 2.91e-190 purR - - F ko:K09685 - ko00000,ko03000 pur operon repressor
GDBFNOLI_00228 3.12e-308 glmU 2.3.1.157, 2.7.7.23 - M ko:K04042 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GDBFNOLI_00229 5.52e-113 - - - - - - - -
GDBFNOLI_00230 0.0 - - - S - - - SLAP domain
GDBFNOLI_00231 5.4e-226 prs 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GDBFNOLI_00232 1.37e-219 - - - GK - - - ROK family
GDBFNOLI_00233 2.53e-56 - - - - - - - -
GDBFNOLI_00234 0.0 - - - S ko:K06885 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
GDBFNOLI_00235 1.75e-89 - - - S - - - Domain of unknown function (DUF1934)
GDBFNOLI_00236 2.38e-88 rpoE - - K ko:K03048 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko03021,ko03400 Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
GDBFNOLI_00237 0.0 pyrG 6.3.4.2 - F ko:K01937 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
GDBFNOLI_00238 1.89e-312 murA 2.5.1.7 - M ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GDBFNOLI_00239 7.28e-97 - - - K - - - acetyltransferase
GDBFNOLI_00240 0.0 pepDA - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
GDBFNOLI_00241 2.73e-201 msmR - - K - - - AraC-like ligand binding domain
GDBFNOLI_00242 1.08e-289 pbuX - - F ko:K03458,ko:K16169 - ko00000,ko02000 xanthine permease
GDBFNOLI_00243 7.92e-135 xpt 2.4.2.22 - F ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000 Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
GDBFNOLI_00244 1.1e-54 - - - K - - - Helix-turn-helix
GDBFNOLI_00245 0.0 guaA 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the synthesis of GMP from XMP
GDBFNOLI_00247 1.89e-129 - - - L - - - Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
GDBFNOLI_00248 2.72e-270 - - - M - - - Rib/alpha-like repeat
GDBFNOLI_00249 8.88e-178 - - - P - - - Voltage gated chloride channel
GDBFNOLI_00250 3.44e-238 - - - C - - - FMN-dependent dehydrogenase
GDBFNOLI_00251 8.68e-69 - - - - - - - -
GDBFNOLI_00252 1.17e-56 - - - - - - - -
GDBFNOLI_00253 1.33e-295 glyA 2.1.2.1 - E ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
GDBFNOLI_00254 0.0 - - - E - - - amino acid
GDBFNOLI_00255 1.64e-200 yhaX - - S - - - Sucrose-6F-phosphate phosphohydrolase
GDBFNOLI_00256 0.0 dexB 3.2.1.70 - G ko:K01215 - ko00000,ko01000 Alpha amylase, catalytic domain protein
GDBFNOLI_00257 1.07e-52 rpmE - - J ko:K02909 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L31
GDBFNOLI_00258 0.0 murF 6.3.2.10 - M ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
GDBFNOLI_00259 0.0 cshA 3.6.4.13 - F ko:K05592 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
GDBFNOLI_00260 9.39e-80 acpS 2.7.8.7 - I ko:K00997 ko00770,map00770 ko00000,ko00001,ko01000 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
GDBFNOLI_00261 1.62e-276 alr 5.1.1.1, 5.1.1.5 - E ko:K01775,ko:K20707 ko00473,ko01100,ko01502,map00473,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GDBFNOLI_00262 1.01e-165 - - - S - - - (CBS) domain
GDBFNOLI_00263 2.93e-234 ldh 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily. LDH family
GDBFNOLI_00264 1.89e-134 pth 3.1.1.29 - J ko:K01056 - ko00000,ko01000,ko03012 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
GDBFNOLI_00265 0.0 mfd - - L ko:K03723 ko03420,map03420 ko00000,ko00001,ko01000,ko03400 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
GDBFNOLI_00266 7.32e-46 yabO - - J - - - S4 domain protein
GDBFNOLI_00267 7.52e-78 divIC - - D ko:K13052 - ko00000,ko03036 Septum formation initiator
GDBFNOLI_00268 1.61e-81 - - - J ko:K07571 - ko00000 S1 RNA binding domain
GDBFNOLI_00269 2.75e-307 tilS 2.4.2.8, 6.3.4.19 - J ko:K04075,ko:K15780 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000,ko03016 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
GDBFNOLI_00270 0.0 ftsH - - O ko:K03798 - ko00000,ko00002,ko01000,ko01002,ko03110 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GDBFNOLI_00271 3.91e-214 hslO - - O ko:K04083 - ko00000,ko03110 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
GDBFNOLI_00272 2.77e-248 dus - - J ko:K05540 - ko00000,ko01000,ko03016 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GDBFNOLI_00273 0.0 lysS 6.1.1.6 - J ko:K04567 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family
GDBFNOLI_00274 2.84e-108 - - - K - - - FR47-like protein
GDBFNOLI_00279 4.19e-92 ytsP 1.8.4.14 - T ko:K08968 ko00270,map00270 ko00000,ko00001,ko01000 GAF domain-containing protein
GDBFNOLI_00280 0.0 clpC - - O ko:K03696 ko01100,map01100 ko00000,ko03110 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
GDBFNOLI_00281 0.0 rpoB 2.7.7.6 - K ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GDBFNOLI_00282 0.0 rpoC 2.7.7.6 - K ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GDBFNOLI_00283 7.71e-157 comC 3.4.23.43 - NOU ko:K02236 - ko00000,ko00002,ko01000,ko02044 Bacterial Peptidase A24 N-terminal domain
GDBFNOLI_00284 1.47e-91 rpsL - - J ko:K02950 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
GDBFNOLI_00285 1.39e-106 rpsG - - J ko:K02992 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
GDBFNOLI_00286 0.0 fusA - - J ko:K02355 - ko00000,ko03012,ko03029 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GDBFNOLI_00287 6.34e-66 rpsJ - - J ko:K02946 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Involved in the binding of tRNA to the ribosomes
GDBFNOLI_00288 6.64e-146 rplC - - J ko:K02906 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
GDBFNOLI_00289 4.68e-138 rplD - - J ko:K02926 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the polypeptide exit tunnel
GDBFNOLI_00290 1.14e-63 rplW - - J ko:K02892 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
GDBFNOLI_00291 3.3e-197 rplB - - J ko:K02886 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
GDBFNOLI_00292 1.14e-62 rpsS - - J ko:K02965 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
GDBFNOLI_00293 9.07e-73 rplV - - J ko:K02890 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
GDBFNOLI_00294 8.7e-157 rpsC - - J ko:K02982 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
GDBFNOLI_00295 1.66e-100 rplP - - J ko:K02878 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
GDBFNOLI_00296 1.45e-34 rpmC - - J ko:K02904 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uL29 family
GDBFNOLI_00297 1.56e-55 rpsQ - - J ko:K02961 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
GDBFNOLI_00298 3.62e-79 rplN - - J ko:K02874 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
GDBFNOLI_00299 3.03e-44 rplX - - J ko:K02895 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
GDBFNOLI_00300 1.23e-123 rplE - - J ko:K02931 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
GDBFNOLI_00301 1e-39 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GDBFNOLI_00302 7.94e-90 rpsH - - J ko:K02994 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
GDBFNOLI_00303 7.18e-121 rplF - - J ko:K02933 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
GDBFNOLI_00304 4.84e-73 rplR - - J ko:K02881 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
GDBFNOLI_00305 3.73e-110 rpsE - - J ko:K02988 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
GDBFNOLI_00306 2.22e-34 rpmD - - J ko:K02907 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L30
GDBFNOLI_00307 2.86e-92 rplO - - J ko:K02876 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
GDBFNOLI_00308 3.59e-301 secY - - U ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
GDBFNOLI_00309 3.7e-155 adk 2.7.4.3 - F ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
GDBFNOLI_00310 3.13e-46 infA - - J ko:K02518 - ko00000,ko03012 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
GDBFNOLI_00311 1.89e-21 rpmJ - - J ko:K02919 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL36 family
GDBFNOLI_00312 2.07e-73 rpsM - - J ko:K02952 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
GDBFNOLI_00313 3.82e-82 rpsK - - J ko:K02948 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
GDBFNOLI_00314 3.62e-218 rpoA 2.7.7.6 - K ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GDBFNOLI_00315 2.23e-80 rplQ - - J ko:K02879 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L17
GDBFNOLI_00316 5.91e-198 ecfA1 - - P ko:K16786 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GDBFNOLI_00317 1.58e-201 ecfA2 - - P ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GDBFNOLI_00318 1.53e-175 ecfT - - U ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GDBFNOLI_00319 5.69e-190 truA 5.4.99.12 - J ko:K06173 - ko00000,ko01000,ko03016 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
GDBFNOLI_00320 3.22e-103 rplM - - J ko:K02871 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
GDBFNOLI_00321 3.94e-85 rpsI - - J ko:K02996 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS9 family
GDBFNOLI_00322 1.44e-234 - - - L - - - Phage integrase family
GDBFNOLI_00323 4.57e-135 - 3.5.1.124 - S ko:K03152 - ko00000,ko01000,ko01002 DJ-1/PfpI family
GDBFNOLI_00324 1.56e-152 - 3.8.1.2 - S ko:K01560 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
GDBFNOLI_00325 2.02e-169 - - - S ko:K07090 - ko00000 membrane transporter protein
GDBFNOLI_00326 3.16e-160 - - - G - - - Belongs to the phosphoglycerate mutase family
GDBFNOLI_00327 8.43e-206 - - - P ko:K16264 - ko00000,ko02000 cation diffusion facilitator family transporter
GDBFNOLI_00328 2.42e-33 - - - - - - - -
GDBFNOLI_00329 9.82e-164 gpmA1 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GDBFNOLI_00330 2.32e-234 - - - S - - - AAA domain
GDBFNOLI_00331 8.69e-66 - - - - - - - -
GDBFNOLI_00332 0.0 pepC 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
GDBFNOLI_00333 1.11e-69 - - - - - - - -
GDBFNOLI_00334 5.22e-131 dut 3.6.1.23 - F ko:K01520 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 dUTP diphosphatase
GDBFNOLI_00335 0.0 radA - - O ko:K04485 - ko00000,ko03400 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
GDBFNOLI_00336 0.0 gltX 6.1.1.24 - J ko:K09698 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GDBFNOLI_00337 0.0 cysS 6.1.1.16 - J ko:K01883 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
GDBFNOLI_00338 2.45e-98 mrnC - - J ko:K11145 - ko00000,ko01000,ko03009 Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
GDBFNOLI_00339 2.69e-178 trmH 2.1.1.185 - J ko:K03218 - ko00000,ko01000,ko03009 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GDBFNOLI_00340 1.55e-122 comX - - K ko:K03088,ko:K03091,ko:K12296 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko03000,ko03021 Belongs to the sigma-70 factor family
GDBFNOLI_00341 1.19e-45 - - - - - - - -
GDBFNOLI_00342 0.0 gntK 2.7.1.12 - G ko:K00851 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko01000 Belongs to the FGGY kinase family
GDBFNOLI_00343 0.0 dxs 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
GDBFNOLI_00344 3.73e-33 secE - - U ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
GDBFNOLI_00345 5e-130 nusG - - K ko:K02601 - ko00000,ko03009,ko03021 Participates in transcription elongation, termination and antitermination
GDBFNOLI_00346 2.69e-90 rplK - - J ko:K02867 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
GDBFNOLI_00347 1.05e-160 rplA - - J ko:K02863 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
GDBFNOLI_00348 5.48e-201 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 Phosphate
GDBFNOLI_00349 1.13e-210 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
GDBFNOLI_00350 2.48e-196 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphate transport system permease protein PstA
GDBFNOLI_00351 5.24e-187 pstB2 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GDBFNOLI_00352 3.83e-178 pstB1 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GDBFNOLI_00353 6.26e-19 phoU - - P ko:K02039 - ko00000 Plays a role in the regulation of phosphate uptake
GDBFNOLI_00355 3.72e-111 rplJ - - J ko:K02864 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
GDBFNOLI_00356 1.61e-72 rplL - - J ko:K02935 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
GDBFNOLI_00357 9.32e-189 - 2.1.1.172 - J ko:K00564,ko:K10716 - ko00000,ko01000,ko02000,ko03009 Ion channel
GDBFNOLI_00358 5.31e-149 rsmC 2.1.1.172 - J ko:K00564 - ko00000,ko01000,ko03009 Methyltransferase
GDBFNOLI_00359 6.15e-36 - - - - - - - -
GDBFNOLI_00360 1.08e-117 tadA 3.5.4.33 - F ko:K11991 - ko00000,ko01000,ko03016 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
GDBFNOLI_00361 0.0 dnaX 2.7.7.7 - L ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GDBFNOLI_00362 1.12e-136 - - - M - - - family 8
GDBFNOLI_00363 1.15e-47 - - - M - - - lipopolysaccharide 3-alpha-galactosyltransferase activity
GDBFNOLI_00364 6.31e-68 yaaK - - S ko:K09747 - ko00000 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
GDBFNOLI_00365 9.21e-142 recR - - L ko:K06187 ko03440,map03440 ko00000,ko00001,ko03400 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
GDBFNOLI_00366 1.67e-46 - - - S - - - Protein of unknown function (DUF2508)
GDBFNOLI_00367 1.15e-146 tmk 2.7.4.9 - F ko:K00943 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
GDBFNOLI_00368 1.58e-70 yaaQ - - S - - - Cyclic-di-AMP receptor
GDBFNOLI_00369 8.4e-199 holB 2.7.7.7 - L ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
GDBFNOLI_00370 1.4e-80 yabA - - L - - - Involved in initiation control of chromosome replication
GDBFNOLI_00371 3.05e-200 rsmI 2.1.1.198 - H ko:K07056 - ko00000,ko01000,ko03009 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GDBFNOLI_00372 4.27e-167 fat 3.1.2.21 - I ko:K01071 ko00061,ko01100,map00061,map01100 ko00000,ko00001,ko01000,ko01004 Acyl-ACP thioesterase
GDBFNOLI_00373 8.72e-111 - - - S - - - ECF transporter, substrate-specific component
GDBFNOLI_00374 3.69e-171 yeaZ 2.3.1.234 - O ko:K01409,ko:K14742 - ko00000,ko01000,ko03016 Universal bacterial protein YeaZ
GDBFNOLI_00375 3.93e-125 rimI 2.3.1.128 - K ko:K03789 - ko00000,ko01000,ko03009 Ribosomal-protein-alanine acetyltransferase
GDBFNOLI_00376 5.79e-247 tsaD 2.3.1.234 - J ko:K01409 - ko00000,ko01000,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
GDBFNOLI_00377 1.28e-311 - - - L ko:K07484 - ko00000 Transposase IS66 family
GDBFNOLI_00378 5.51e-46 - - - S - - - Transposase C of IS166 homeodomain
GDBFNOLI_00379 4.01e-84 XK27_01125 - - L ko:K07484 - ko00000 PFAM IS66 Orf2 family protein
GDBFNOLI_00380 9.48e-31 - - - - - - - -
GDBFNOLI_00381 3.06e-53 bbsF_1 2.8.3.19 - C ko:K18702 - ko00000,ko01000 Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
GDBFNOLI_00382 6.43e-230 frc 2.8.3.16 - C ko:K07749 - ko00000,ko01000 Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
GDBFNOLI_00383 0.0 spxB 1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8 - EH ko:K00156,ko:K00158,ko:K01577,ko:K01652 ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the TPP enzyme family
GDBFNOLI_00384 0.0 ydiF - - S ko:K06158 - ko00000,ko03012 ABC transporter, ATP-binding protein
GDBFNOLI_00385 8.74e-146 rex - - K ko:K01926 - ko00000,ko03000 Modulates transcription in response to changes in cellular NADH NAD( ) redox state
GDBFNOLI_00386 2.14e-234 scrR - - K ko:K03484 - ko00000,ko03000 helix_turn _helix lactose operon repressor
GDBFNOLI_00387 0.0 scrB 3.2.1.26 GH32 G ko:K01193 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 invertase
GDBFNOLI_00388 0.0 scrA 2.7.1.211 - G ko:K02808,ko:K02809,ko:K02810 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
GDBFNOLI_00389 2.14e-231 - - - M - - - CHAP domain
GDBFNOLI_00390 2.79e-102 - - - - - - - -
GDBFNOLI_00391 1.06e-58 groS - - O ko:K04078 - ko00000,ko03029,ko03110 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GDBFNOLI_00392 0.0 groL - - O ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
GDBFNOLI_00393 0.0 mutS - - L ko:K03555 ko03430,map03430 ko00000,ko00001,ko03400 that it carries out the mismatch recognition step. This protein has a weak ATPase activity
GDBFNOLI_00394 0.0 mutL - - L ko:K03572 ko03430,map03430 ko00000,ko00001,ko03400 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
GDBFNOLI_00395 3.89e-132 ruvA 3.6.4.12 - L ko:K03550 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
GDBFNOLI_00396 1.39e-237 ruvB 3.6.4.12 - L ko:K03551 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
GDBFNOLI_00397 7.58e-69 yajC - - U ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase
GDBFNOLI_00398 0.0 zwf 1.1.1.363, 1.1.1.49 - G ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
GDBFNOLI_00399 6.15e-268 dinB 2.7.7.7 - L ko:K02346 - ko00000,ko01000,ko03400 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GDBFNOLI_00400 3.16e-231 nrnA 3.1.13.3, 3.1.3.7 - S ko:K06881 ko00920,ko01100,ko01120,map00920,map01100,map01120 ko00000,ko00001,ko01000,ko03400 DHHA1 domain protein
GDBFNOLI_00401 1.26e-303 cshB 3.6.4.13 - JKL ko:K05592,ko:K18692 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
GDBFNOLI_00402 0.0 alaS 6.1.1.7 - J ko:K01872 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GDBFNOLI_00403 5.32e-57 yrzL - - S - - - Belongs to the UPF0297 family
GDBFNOLI_00404 9.37e-96 yrrK - - J ko:K07447 - ko00000,ko01000 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
GDBFNOLI_00405 1.18e-66 yrzB - - S - - - Belongs to the UPF0473 family
GDBFNOLI_00406 0.0 mutS2 - - L ko:K07456 ko03430,map03430 ko00000,ko00001,ko03400 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
GDBFNOLI_00407 5.37e-72 trxA - - O ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Belongs to the thioredoxin family
GDBFNOLI_00408 2.34e-76 mscL - - M ko:K03282 - ko00000,ko02000 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
GDBFNOLI_00409 5.41e-93 yslB - - S - - - Protein of unknown function (DUF2507)
GDBFNOLI_00410 2.79e-184 murI 3.6.1.66, 5.1.1.3 - M ko:K01776,ko:K02428 ko00230,ko00471,ko01100,map00230,map00471,map01100 ko00000,ko00001,ko01000,ko01011 Provides the (R)-glutamate required for cell wall biosynthesis
GDBFNOLI_00411 8.12e-144 rdgB 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
GDBFNOLI_00412 3.66e-145 - - - - ko:K01992 - ko00000,ko00002,ko02000 -
GDBFNOLI_00413 3.51e-174 - - - - - - - -
GDBFNOLI_00414 2.35e-51 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
GDBFNOLI_00415 1.23e-175 - - - L - - - An automated process has identified a potential problem with this gene model
GDBFNOLI_00416 5.25e-61 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
GDBFNOLI_00417 4.28e-187 ykuT - - M ko:K16052,ko:K22044 - ko00000,ko02000 mechanosensitive ion channel
GDBFNOLI_00418 2.96e-23 ytxG - - S - - - protein containing a divergent version of the methyl-accepting chemotaxis-like domain
GDBFNOLI_00419 1.36e-65 - - - - - - - -
GDBFNOLI_00420 1.6e-272 pepQ 3.4.13.9 - E ko:K01271 - ko00000,ko01000,ko01002 Creatinase/Prolidase N-terminal domain
GDBFNOLI_00421 1.23e-231 ccpA - - K ko:K02529 - ko00000,ko03000 catabolite control protein A
GDBFNOLI_00422 0.0 - 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 glycerophosphoryl diester phosphodiesterase
GDBFNOLI_00423 9.89e-74 - - - - - - - -
GDBFNOLI_00424 0.0 sasH 3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45 - F ko:K01081,ko:K01119,ko:K07004,ko:K08693,ko:K11751 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the 5'-nucleotidase family
GDBFNOLI_00425 4.25e-119 yutD - - S - - - Protein of unknown function (DUF1027)
GDBFNOLI_00426 6.38e-184 nagD 3.1.3.41 - G ko:K01101 ko00627,ko01120,map00627,map01120 ko00000,ko00001,ko01000 Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
GDBFNOLI_00427 2.15e-137 - - - S - - - Protein of unknown function (DUF1461)
GDBFNOLI_00428 6.9e-150 dedA - - S ko:K03975 - ko00000 SNARE-like domain protein
GDBFNOLI_00429 1.76e-234 yumC 1.18.1.2, 1.19.1.1 - C ko:K21567 - ko00000,ko01000 Ferredoxin--NADP reductase
GDBFNOLI_00457 1.72e-286 - 2.4.1.337 GT4 M ko:K19002 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000,ko01003 Glycosyl transferase 4-like domain
GDBFNOLI_00458 3.68e-256 cpoA 2.4.1.208 GT4 M ko:K13677,ko:K13678 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000,ko01003 Glycosyltransferase, group 1 family protein
GDBFNOLI_00459 5.35e-224 mprF - - S ko:K07027 - ko00000,ko02000 Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
GDBFNOLI_00460 0.0 ltaS 2.7.8.20 - M ko:K19005 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
GDBFNOLI_00461 1.3e-40 secG - - U ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase
GDBFNOLI_00462 0.0 rnr - - J ko:K12573 ko03018,map03018 ko00000,ko00001,ko01000,ko03016,ko03019 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
GDBFNOLI_00463 1.58e-101 smpB - - J ko:K03664 - ko00000 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
GDBFNOLI_00466 5.31e-211 - - - P ko:K02077 - ko00000,ko00002,ko02000 Belongs to the bacterial solute-binding protein 9 family
GDBFNOLI_00469 7.29e-287 metK 2.5.1.6 - H ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
GDBFNOLI_00470 0.0 mdr - - EGP - - - Major Facilitator
GDBFNOLI_00472 1.92e-102 - - - K - - - Helix-turn-helix domain, rpiR family
GDBFNOLI_00473 3.39e-154 murQ 4.2.1.126 - G ko:K07106 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
GDBFNOLI_00474 1.32e-151 - - - S - - - Putative esterase
GDBFNOLI_00475 1.81e-270 - 2.7.1.211 - G ko:K02809,ko:K02810 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
GDBFNOLI_00476 7.66e-248 - - - S ko:K09963 - ko00000 Bacterial protein of unknown function (DUF871)
GDBFNOLI_00477 3.75e-168 - - - K - - - rpiR family
GDBFNOLI_00478 7.25e-309 cydA 1.10.3.14 - C ko:K00425 ko00190,ko01100,ko02020,map00190,map01100,map02020 ko00000,ko00001,ko00002,ko01000 ubiquinol oxidase
GDBFNOLI_00479 9.83e-236 cydB 1.10.3.14 - C ko:K00426 ko00190,ko01100,ko02020,map00190,map01100,map02020 ko00000,ko00001,ko00002,ko01000 Cytochrome d ubiquinol oxidase subunit II
GDBFNOLI_00480 0.0 cydC - - CO ko:K16013 ko02010,map02010 ko00000,ko00001,ko02000 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
GDBFNOLI_00481 0.0 cydD - - CO ko:K16012 ko02010,map02010 ko00000,ko00001,ko02000 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
GDBFNOLI_00482 1.76e-165 menG 2.1.1.163, 2.1.1.201 - H ko:K03183 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
GDBFNOLI_00483 8.31e-228 hepT 2.5.1.30 - H ko:K00805 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Belongs to the FPP GGPP synthase family
GDBFNOLI_00484 1.03e-206 menA 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 1,4-dihydroxy-2-naphthoate
GDBFNOLI_00485 3.01e-294 yumB 1.6.99.3 - C ko:K03885 ko00190,map00190 ko00000,ko00001,ko01000 NADH dehydrogenase
GDBFNOLI_00486 1.41e-51 - 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
GDBFNOLI_00487 9.32e-109 - - - S - - - PD-(D/E)XK nuclease family transposase
GDBFNOLI_00488 6.75e-216 - - - K - - - LysR substrate binding domain
GDBFNOLI_00489 1.39e-156 yodM 3.6.1.27 - I ko:K19302 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Acid phosphatase homologues
GDBFNOLI_00490 0.0 leuS 6.1.1.4 - J ko:K01869 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Belongs to the class-I aminoacyl-tRNA synthetase family
GDBFNOLI_00491 0.0 ytgP - - S ko:K03328 - ko00000 Polysaccharide biosynthesis protein
GDBFNOLI_00492 3.11e-256 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
GDBFNOLI_00493 4.84e-42 - - - - - - - -
GDBFNOLI_00494 9.14e-187 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 Phosphate
GDBFNOLI_00495 8.73e-205 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
GDBFNOLI_00496 8.63e-195 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphate transport system permease protein PstA
GDBFNOLI_00497 4.66e-179 pstB 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GDBFNOLI_00498 6.07e-138 - - - P ko:K02039 - ko00000 Plays a role in the regulation of phosphate uptake
GDBFNOLI_00499 2.69e-156 phoB - - T ko:K07658 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Transcriptional regulatory protein, C terminal
GDBFNOLI_00500 0.0 phoR 2.7.13.3 - T ko:K07636 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
GDBFNOLI_00501 6.97e-289 - - - L ko:K07497 - ko00000 COG2963 Transposase and inactivated derivatives
GDBFNOLI_00502 3.54e-300 - - - L ko:K07497 - ko00000 COG2963 Transposase and inactivated derivatives
GDBFNOLI_00503 1.59e-61 pspC - - KT ko:K03973 - ko00000,ko02048,ko03000 PspC domain
GDBFNOLI_00505 9.64e-307 dacA 3.4.16.4 - M ko:K07258 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01002,ko01011 Belongs to the peptidase S11 family
GDBFNOLI_00506 2.23e-197 nnrD 4.2.1.136, 5.1.99.6 - H ko:K17758,ko:K17759 - ko00000,ko01000 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
GDBFNOLI_00507 2.78e-129 - - - M - - - ErfK YbiS YcfS YnhG
GDBFNOLI_00508 0.0 argS 6.1.1.19 - J ko:K01887 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Arginyl-tRNA synthetase
GDBFNOLI_00509 6.03e-218 fba 4.1.2.13, 4.1.2.29 - G ko:K01624,ko:K03339 ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Fructose-1,6-bisphosphate aldolase, class II
GDBFNOLI_00510 8.08e-108 - - - S - - - PFAM Archaeal ATPase
GDBFNOLI_00511 2.86e-102 - - - S - - - PFAM Archaeal ATPase
GDBFNOLI_00512 7.02e-36 - - - - - - - -
GDBFNOLI_00513 8.2e-98 menA 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 UbiA prenyltransferase family
GDBFNOLI_00514 1.86e-91 - - - S ko:K07133 - ko00000 cog cog1373
GDBFNOLI_00515 1.36e-221 - - - S - - - PFAM Archaeal ATPase
GDBFNOLI_00516 4.77e-248 - - - I - - - transferase activity, transferring acyl groups other than amino-acyl groups
GDBFNOLI_00517 4.95e-164 citG 2.4.2.52 - H ko:K05966 ko02020,map02020 ko00000,ko00001,ko01000 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
GDBFNOLI_00518 2.74e-06 - - - S - - - PFAM Archaeal ATPase
GDBFNOLI_00519 2.3e-174 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
GDBFNOLI_00520 7.62e-134 - - - G - - - Phosphoglycerate mutase family
GDBFNOLI_00521 0.0 pps 2.7.9.2 - H ko:K01007 ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
GDBFNOLI_00522 1.21e-207 rluA 5.4.99.23, 5.4.99.28, 5.4.99.29 - J ko:K06177,ko:K06180 - ko00000,ko01000,ko03009,ko03016 Responsible for synthesis of pseudouridine from uracil
GDBFNOLI_00523 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M ko:K12555 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 penicillin-binding protein
GDBFNOLI_00524 8.43e-73 yheA - - S - - - Belongs to the UPF0342 family
GDBFNOLI_00525 4.24e-289 yhaO - - L ko:K03547 - ko00000,ko03400 Ser Thr phosphatase family protein
GDBFNOLI_00526 0.0 yhaN - - L - - - AAA domain
GDBFNOLI_00527 4.53e-239 yhaM - - S ko:K03698 - ko00000,ko01000,ko03019 Metal dependent phosphohydrolases with conserved 'HD' motif.
GDBFNOLI_00529 9.67e-33 - - - S - - - Domain of unknown function DUF1829
GDBFNOLI_00530 0.0 - - - - - - - -
GDBFNOLI_00531 5.74e-96 eda 4.1.2.14, 4.1.3.42 - G ko:K01625 ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 KDPG and KHG aldolase
GDBFNOLI_00532 3.12e-196 prsA 5.2.1.8 - M ko:K07533 - ko00000,ko01000,ko03110 Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
GDBFNOLI_00533 1.2e-41 - - - - - - - -
GDBFNOLI_00534 1.61e-101 hit - - FG ko:K02503 - ko00000,ko04147 Scavenger mRNA decapping enzyme C-term binding
GDBFNOLI_00535 3.67e-174 ecsA - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
GDBFNOLI_00536 1.63e-281 ecsB - - U ko:K01992 - ko00000,ko00002,ko02000 ABC transporter
GDBFNOLI_00537 2.16e-163 trmB 2.1.1.33 - J ko:K03439 - ko00000,ko01000,ko03016 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
GDBFNOLI_00539 1.35e-71 ytpP - - CO - - - Thioredoxin
GDBFNOLI_00540 1.28e-156 XK27_10290 - - J ko:K06878 - ko00000 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
GDBFNOLI_00541 2.59e-313 murC 6.3.2.8 - M ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Belongs to the MurCDEF family
GDBFNOLI_00542 4.65e-278 mepA - - V ko:K18908 - ko00000,ko00002,ko01504,ko02000 MATE efflux family protein
GDBFNOLI_00543 2.04e-226 - - - S - - - SLAP domain
GDBFNOLI_00544 0.0 - - - M - - - Peptidase family M1 domain
GDBFNOLI_00545 4.03e-238 - - - S - - - Bacteriocin helveticin-J
GDBFNOLI_00546 1.33e-67 - - - L ko:K07473 - ko00000,ko02048 RelB antitoxin
GDBFNOLI_00547 2.53e-139 hflC - - O ko:K04087 - ko00000,ko00002,ko01000 prohibitin homologues
GDBFNOLI_00548 1.98e-35 hflC - - O ko:K04087 - ko00000,ko00002,ko01000 prohibitin homologues
GDBFNOLI_00549 0.0 polA 2.7.7.7 - L ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 ko00000,ko00001,ko01000,ko03032,ko03400 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GDBFNOLI_00550 7.81e-199 fpg 3.2.2.23, 4.2.99.18 - L ko:K10563 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
GDBFNOLI_00551 2.16e-136 coaE 2.7.1.24 - F ko:K00859 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
GDBFNOLI_00552 1.29e-106 nrdR - - K ko:K07738 - ko00000,ko03000 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
GDBFNOLI_00553 0.0 dnaB2 - - L ko:K03346 - ko00000,ko03032 Replication initiation and membrane attachment
GDBFNOLI_00554 1.31e-215 dnaI - - L ko:K11144 - ko00000,ko03032 Primosomal protein DnaI
GDBFNOLI_00555 0.0 thrS 6.1.1.3 - J ko:K01868 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GDBFNOLI_00556 5.59e-98 - - - - - - - -
GDBFNOLI_00557 1.53e-122 B4168_4126 - - L ko:K07493 - ko00000 Transposase
GDBFNOLI_00558 6.49e-137 B4168_4126 - - L ko:K07493 - ko00000 Transposase
GDBFNOLI_00561 8.95e-70 - - - K - - - LytTr DNA-binding domain
GDBFNOLI_00562 9.29e-51 - - - S - - - Protein of unknown function (DUF3021)
GDBFNOLI_00563 1.26e-216 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
GDBFNOLI_00564 2.25e-30 - - - S ko:K01992 - ko00000,ko00002,ko02000 domain protein
GDBFNOLI_00565 1.1e-128 - - - E ko:K02054 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDBFNOLI_00566 6.18e-123 rihC 3.2.2.1 - F ko:K01239,ko:K01250,ko:K12700 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 Nucleoside
GDBFNOLI_00567 1.07e-93 infC - - J ko:K02520 - ko00000,ko03012,ko03029 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
GDBFNOLI_00568 9.64e-38 rpmI - - J ko:K02916 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL35 family
GDBFNOLI_00569 8.69e-76 rplT - - J ko:K02887 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
GDBFNOLI_00570 1.25e-192 add 3.5.4.2, 3.5.4.4 - F ko:K01488,ko:K02029,ko:K21053 ko00230,ko01100,ko05340,map00230,map01100,map05340 ko00000,ko00001,ko00002,ko01000,ko02000 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
GDBFNOLI_00571 3.01e-255 tnpB - - L ko:K07496 - ko00000 Putative transposase DNA-binding domain
GDBFNOLI_00572 6.85e-109 yqeG - - S ko:K07015 - ko00000 HAD phosphatase, family IIIA
GDBFNOLI_00573 5.03e-256 yqeH - - S ko:K06948 - ko00000,ko03009 Ribosome biogenesis GTPase YqeH
GDBFNOLI_00574 1.77e-157 nadD 2.7.7.18 - H ko:K00969 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
GDBFNOLI_00575 9.22e-141 yqeK - - H - - - Hydrolase, HD family
GDBFNOLI_00576 5.09e-78 rsfS - - J ko:K09710 - ko00000,ko03009 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
GDBFNOLI_00577 4.63e-275 ylbM - - S - - - Belongs to the UPF0348 family
GDBFNOLI_00578 2.19e-125 ylbN - - S ko:K07040 - ko00000 Uncharacterized ACR, COG1399
GDBFNOLI_00579 3.52e-163 csrR - - K - - - response regulator
GDBFNOLI_00580 0.0 arlS 2.7.13.3 - T ko:K18940 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Histidine kinase
GDBFNOLI_00581 9.04e-162 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
GDBFNOLI_00582 7.24e-284 - - - S - - - SLAP domain
GDBFNOLI_00583 2.42e-69 - - - S - - - Abi-like protein
GDBFNOLI_00584 2.08e-95 - - - S ko:K19055 - ko00000,ko01000,ko03016 Aminoacyl-tRNA editing domain
GDBFNOLI_00585 2.43e-216 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
GDBFNOLI_00586 5.58e-59 acyP 3.6.1.7 - C ko:K01512 ko00620,ko00627,ko01120,map00620,map00627,map01120 ko00000,ko00001,ko01000 Belongs to the acylphosphatase family
GDBFNOLI_00587 3.23e-172 spoU - - J ko:K03437 - ko00000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GDBFNOLI_00588 4.87e-81 yodB - - K - - - Transcriptional regulator, HxlR family
GDBFNOLI_00590 1.8e-142 glnP9 - - P ko:K02029 - ko00000,ko00002,ko02000 ABC transporter, permease protein
GDBFNOLI_00591 4.11e-150 glnP7 - - P ko:K02029 - ko00000,ko00002,ko02000 ABC transporter permease
GDBFNOLI_00592 1.89e-171 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
GDBFNOLI_00593 1.02e-67 cjaA - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein
GDBFNOLI_00594 8.08e-117 cjaA - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein
GDBFNOLI_00595 1.3e-117 ydiM - - G - - - Major facilitator superfamily
GDBFNOLI_00596 2.9e-254 pheS 6.1.1.20 - J ko:K01889 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
GDBFNOLI_00597 0.0 pheT 6.1.1.20 - J ko:K01890 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
GDBFNOLI_00598 1.72e-92 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GDBFNOLI_00599 8.21e-215 ldh3 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 lactate/malate dehydrogenase, alpha/beta C-terminal domain
GDBFNOLI_00600 5.5e-203 metQ - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the nlpA lipoprotein family
GDBFNOLI_00601 1.8e-34 - - - - - - - -
GDBFNOLI_00602 0.0 sufI - - Q - - - Multicopper oxidase
GDBFNOLI_00603 1.76e-193 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
GDBFNOLI_00604 0.0 oppA - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter
GDBFNOLI_00605 2.77e-292 - - - Q - - - Imidazolonepropionase and related amidohydrolases
GDBFNOLI_00606 5.84e-312 - - - S ko:K12941 - ko00000,ko01002 Peptidase dimerisation domain
GDBFNOLI_00607 1.3e-175 - - - S - - - Protein of unknown function (DUF3100)
GDBFNOLI_00608 2.04e-60 - - - S - - - An automated process has identified a potential problem with this gene model
GDBFNOLI_00609 4.34e-64 - 2.7.7.49 - L ko:K00986 - ko00000,ko01000 PFAM RNA-directed DNA polymerase (Reverse transcriptase)
GDBFNOLI_00610 1.29e-164 - - - S - - - SLAP domain
GDBFNOLI_00611 6.09e-121 - - - - - - - -
GDBFNOLI_00613 7.04e-159 - - - M ko:K14193 ko05150,map05150 ko00000,ko00001 Iron Transport-associated domain
GDBFNOLI_00614 2.07e-203 isdE - - P ko:K02016 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Periplasmic binding protein
GDBFNOLI_00615 1.55e-201 isdF - - U ko:K02015 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GDBFNOLI_00616 1.49e-178 - 3.6.3.34 - HP ko:K02013 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 abc transporter atp-binding protein
GDBFNOLI_00617 2.22e-60 hupB2 - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
GDBFNOLI_00618 2.74e-69 - - - S ko:K19157 - ko00000,ko01000,ko02048 Bacterial toxin of type II toxin-antitoxin system, YafQ
GDBFNOLI_00619 9.43e-52 - - - S ko:K07473 - ko00000,ko02048 RelB antitoxin
GDBFNOLI_00620 7.04e-218 - - - G - - - BadF/BadG/BcrA/BcrD ATPase family
GDBFNOLI_00621 0.0 - - - S - - - membrane
GDBFNOLI_00622 0.0 pbp2b - - M ko:K00687,ko:K12553,ko:K21465,ko:K21466 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011 Penicillin-binding Protein
GDBFNOLI_00623 6.25e-29 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL33 family
GDBFNOLI_00624 7.92e-126 fthC 6.3.3.2 - H ko:K01934 ko00670,ko01100,map00670,map01100 ko00000,ko00001,ko01000 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
GDBFNOLI_00625 3.25e-154 gluP 3.4.21.105 - S ko:K19225 - ko00000,ko01000,ko01002 Rhomboid family
GDBFNOLI_00626 1e-47 yqgQ - - S - - - Bacterial protein of unknown function (DUF910)
GDBFNOLI_00627 4.95e-89 yqhL - - P - - - Rhodanese-like protein
GDBFNOLI_00628 3.84e-216 miaA 2.5.1.75 - F ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 ko00000,ko00001,ko01000,ko01006,ko03016 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
GDBFNOLI_00629 2.05e-286 ynbB - - P - - - aluminum resistance
GDBFNOLI_00630 0.0 glnA 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 glutamine synthetase
GDBFNOLI_00631 2.37e-219 - - - - - - - -
GDBFNOLI_00632 2.09e-205 - - - - - - - -
GDBFNOLI_00636 6.78e-47 - - - - - - - -
GDBFNOLI_00637 1.44e-161 - - - S - - - interspecies interaction between organisms
GDBFNOLI_00638 1.28e-09 - - - S - - - PFAM HicB family
GDBFNOLI_00639 2.86e-13 - - - K ko:K15773 - ko00000,ko02048,ko03000 peptidyl-tyrosine sulfation
GDBFNOLI_00640 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
GDBFNOLI_00641 1.57e-84 - - - K - - - Helix-turn-helix domain, rpiR family
GDBFNOLI_00642 2.65e-154 nanA 4.1.3.3 - EM ko:K01639 ko00520,map00520 ko00000,ko00001,ko01000 Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
GDBFNOLI_00643 1.03e-112 nanK - - GK - - - ROK family
GDBFNOLI_00644 3.74e-70 - - - G - - - Xylose isomerase domain protein TIM barrel
GDBFNOLI_00645 1.48e-166 napA - - P - - - Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
GDBFNOLI_00646 6.48e-279 - - - E ko:K03307 - ko00000 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GDBFNOLI_00647 1.4e-74 cah 3.1.1.41 - Q ko:K01060 ko00311,ko01130,map00311,map01130 ko00000,ko00001,ko01000 Acetyl xylan esterase (AXE1)
GDBFNOLI_00648 4.42e-45 cah 3.1.1.41 - Q ko:K01060 ko00311,ko01130,map00311,map01130 ko00000,ko00001,ko01000 Acetyl xylan esterase (AXE1)
GDBFNOLI_00649 6.9e-141 nanE 5.1.3.9 - G ko:K01788 ko00520,map00520 ko00000,ko00001,ko01000 Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
GDBFNOLI_00650 2.58e-13 nagA 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Belongs to the metallo-dependent hydrolases superfamily. NagA family
GDBFNOLI_00651 1.59e-108 nagA 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Belongs to the metallo-dependent hydrolases superfamily. NagA family
GDBFNOLI_00652 5.55e-137 - - - K - - - Transcriptional regulator, AbiEi antitoxin
GDBFNOLI_00653 2.44e-210 - - - S - - - Nucleotidyl transferase AbiEii toxin, Type IV TA system
GDBFNOLI_00654 2.84e-240 galE 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family
GDBFNOLI_00655 5.06e-184 lacM 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 beta-galactosidase
GDBFNOLI_00656 0.0 lacL 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 2 family
GDBFNOLI_00657 1.48e-210 lacR - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator
GDBFNOLI_00658 0.0 lacS - - G ko:K11104,ko:K16209 - ko00000,ko02000 Transporter
GDBFNOLI_00659 0.0 lacZ 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 -beta-galactosidase
GDBFNOLI_00660 4.16e-280 galK 2.7.1.6 - F ko:K00849 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
GDBFNOLI_00661 0.0 galT 2.7.7.12 - G ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 ko00000,ko00001,ko00002,ko01000 UDP-glucose--hexose-1-phosphate uridylyltransferase
GDBFNOLI_00662 1.6e-251 galM 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the interconversion of alpha and beta anomers of maltose
GDBFNOLI_00663 2.14e-48 - - - - - - - -
GDBFNOLI_00664 3.96e-92 - - - K ko:K03484 - ko00000,ko03000 Periplasmic binding protein domain
GDBFNOLI_00665 4e-31 dltr - - K - - - response regulator
GDBFNOLI_00666 3e-290 sptS - - T - - - Histidine kinase
GDBFNOLI_00667 1.36e-266 - - - EGP - - - Major Facilitator Superfamily
GDBFNOLI_00668 2.65e-89 - - - O - - - OsmC-like protein
GDBFNOLI_00669 1.92e-113 yhaH - - S - - - Protein of unknown function (DUF805)
GDBFNOLI_00670 5.87e-110 - - - - - - - -
GDBFNOLI_00671 0.0 - - - - - - - -
GDBFNOLI_00672 2.65e-107 - - - S - - - Fic/DOC family
GDBFNOLI_00673 0.0 potE - - E - - - Amino Acid
GDBFNOLI_00674 2.44e-285 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GDBFNOLI_00675 1.43e-309 lctO 1.13.12.4 - C ko:K00467,ko:K10530 ko00620,map00620 ko00000,ko00001,ko01000 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
GDBFNOLI_00676 7.68e-63 dapE 3.5.1.18 - E ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 succinyl-diaminopimelate desuccinylase
GDBFNOLI_00677 5.01e-150 dapE 3.5.1.18 - E ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 succinyl-diaminopimelate desuccinylase
GDBFNOLI_00678 6.51e-69 yitW - - S - - - Iron-sulfur cluster assembly protein
GDBFNOLI_00679 7.73e-199 sdaAA 4.3.1.17 - E ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko01000 L-serine dehydratase, iron-sulfur-dependent, alpha subunit
GDBFNOLI_00680 3.23e-59 - - - - - - - -
GDBFNOLI_00681 0.0 yjcA - - S ko:K19350 ko02010,map02010 ko00000,ko00001,ko01504,ko02000 ABC transporter
GDBFNOLI_00682 0.0 pulA 3.2.1.41 CBM48,GH13 G ko:K01200 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko01000 belongs to the glycosyl hydrolase 13 family
GDBFNOLI_00683 4.14e-113 - - - K ko:K03484 - ko00000,ko03000 Periplasmic binding protein domain
GDBFNOLI_00685 5.32e-42 - - - - ko:K18829 - ko00000,ko02048 -
GDBFNOLI_00686 4.02e-91 - - - T ko:K07171 - ko00000,ko01000,ko02048 Toxin-antitoxin system, toxin component, MazF family
GDBFNOLI_00687 9e-132 - - - L - - - Integrase
GDBFNOLI_00688 1.48e-136 - - - L - - - PFAM Integrase catalytic
GDBFNOLI_00689 2.28e-76 eriC - - P ko:K03281 - ko00000 chloride
GDBFNOLI_00690 2.99e-07 eriC - - P ko:K03281 - ko00000 chloride
GDBFNOLI_00691 5.93e-50 eriC - - P ko:K03281 - ko00000 chloride
GDBFNOLI_00692 6.55e-76 eriC - - P ko:K03281 - ko00000 chloride
GDBFNOLI_00693 1.45e-34 - - - K - - - FCD
GDBFNOLI_00694 1.36e-13 - - - K - - - FCD
GDBFNOLI_00695 4.37e-132 - - - GM - - - NmrA-like family
GDBFNOLI_00696 5.5e-154 pyrE 2.4.2.10 - F ko:K00762 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GDBFNOLI_00697 1.56e-164 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
GDBFNOLI_00698 8.81e-212 pyrD 1.3.1.14, 1.3.98.1 - F ko:K00226,ko:K17828 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
GDBFNOLI_00699 2.9e-122 pyrR 2.4.2.9 - F ko:K02825 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000,ko03000 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
GDBFNOLI_00700 9.05e-231 pyrB 2.1.3.2 - F ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
GDBFNOLI_00701 8.31e-313 pyrC 3.5.2.3 - F ko:K01465 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
GDBFNOLI_00702 4.22e-269 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase glutamine chain
GDBFNOLI_00703 0.0 carB 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase
GDBFNOLI_00704 0.0 lctP - - C ko:K03303 - ko00000,ko02000 L-lactate permease
GDBFNOLI_00705 6.79e-190 - - - U ko:K05340 - ko00000,ko02000 sugar transport
GDBFNOLI_00706 8.74e-62 - - - - - - - -
GDBFNOLI_00707 2.88e-105 msrB 1.8.4.12 - O ko:K07305 - ko00000,ko01000 peptide methionine sulfoxide reductase
GDBFNOLI_00708 0.0 pepX 3.4.14.11 - E ko:K01281 - ko00000,ko01000,ko01002 Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
GDBFNOLI_00709 1.02e-29 - - - S - - - Alpha beta hydrolase
GDBFNOLI_00710 2.48e-80 - - - S - - - Alpha beta hydrolase
GDBFNOLI_00711 8.51e-50 - - - - - - - -
GDBFNOLI_00712 4.3e-66 - - - - - - - -
GDBFNOLI_00713 1.14e-189 supH - - S - - - haloacid dehalogenase-like hydrolase
GDBFNOLI_00714 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
GDBFNOLI_00715 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
GDBFNOLI_00716 1.82e-86 yusI 1.20.4.1 - P ko:K00537 - ko00000,ko01000 Belongs to the ArsC family
GDBFNOLI_00717 1.23e-227 lipA - - I - - - Carboxylesterase family
GDBFNOLI_00719 1.16e-269 - - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
GDBFNOLI_00720 8.21e-200 cinI - - S ko:K06889 - ko00000 Serine hydrolase (FSH1)
GDBFNOLI_00721 0.0 - - - S - - - Predicted membrane protein (DUF2207)
GDBFNOLI_00722 2.07e-38 dmpI 5.3.2.6 - G ko:K01821 ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220 ko00000,ko00001,ko00002,ko01000 Belongs to the 4-oxalocrotonate tautomerase family
GDBFNOLI_00724 0.0 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2325)
GDBFNOLI_00725 5.24e-194 - - - S - - - Uncharacterised 5xTM membrane BCR, YitT family COG1284
GDBFNOLI_00726 6.82e-66 rplU - - J ko:K02888 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to 23S rRNA in the presence of protein L20
GDBFNOLI_00727 7.95e-64 rpmA - - J ko:K02899 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL27 family
GDBFNOLI_00728 2.14e-257 pepP 3.4.11.9, 3.4.13.9 - E ko:K01262,ko:K01271 - ko00000,ko01000,ko01002 Creatinase/Prolidase N-terminal domain
GDBFNOLI_00729 2.11e-133 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GDBFNOLI_00730 7.98e-93 WQ51_04310 - - S ko:K10947 - ko00000,ko03000 Asp23 family, cell envelope-related function
GDBFNOLI_00731 2.78e-85 nusB - - K ko:K03625 - ko00000,ko03009,ko03021 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GDBFNOLI_00732 7.19e-199 folD 1.5.1.5, 3.5.4.9 - F ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
GDBFNOLI_00733 1.97e-248 xseA 3.1.11.6 - L ko:K03601 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GDBFNOLI_00734 1.53e-47 xseB 3.1.11.6 - L ko:K03602 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GDBFNOLI_00735 6.44e-205 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29 - H ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the FPP GGPP synthase family
GDBFNOLI_00736 7.22e-197 rrmJ 2.1.1.226, 2.1.1.227 - J ko:K06442 - ko00000,ko01000,ko03009 Ribosomal RNA large subunit methyltransferase J
GDBFNOLI_00737 0.0 recN - - L ko:K03631 - ko00000,ko03400 May be involved in recombinational repair of damaged DNA
GDBFNOLI_00738 2.19e-100 - - - S - - - ASCH
GDBFNOLI_00739 5.97e-145 gmk 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Essential for recycling GMP and indirectly, cGMP
GDBFNOLI_00740 2.37e-46 rpoZ 2.7.7.6 - K ko:K03060 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
GDBFNOLI_00741 0.0 priA - - L ko:K04066 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GDBFNOLI_00742 1.27e-219 fmt 2.1.2.9 - J ko:K00604 ko00670,ko00970,map00670,map00970 ko00000,ko00001,ko01000 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
GDBFNOLI_00743 7.82e-311 sun 2.1.1.176 - J ko:K03500 - ko00000,ko01000,ko03009 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
GDBFNOLI_00744 3.28e-179 stp 3.1.3.16 - T ko:K20074 - ko00000,ko01000,ko01009 phosphatase
GDBFNOLI_00745 0.0 prkC 2.7.11.1 - KLT ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 serine threonine protein kinase
GDBFNOLI_00746 1.71e-208 rsgA 3.1.3.100 - S ko:K06949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
GDBFNOLI_00747 7.49e-154 rpe 5.1.3.1 - G ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the ribulose-phosphate 3-epimerase family
GDBFNOLI_00748 1.1e-159 thiN 2.7.6.2 - H ko:K00949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 thiamine pyrophosphokinase
GDBFNOLI_00749 2.29e-41 - - - - - - - -
GDBFNOLI_00750 8.76e-146 int3 - - L - - - Belongs to the 'phage' integrase family
GDBFNOLI_00753 2.15e-09 - - - K - - - Helix-turn-helix XRE-family like proteins
GDBFNOLI_00754 2.69e-25 - - - K - - - Helix-turn-helix XRE-family like proteins
GDBFNOLI_00755 1.23e-101 - - - S - - - Phage antirepressor protein KilAC domain
GDBFNOLI_00756 5.99e-61 - - - - - - - -
GDBFNOLI_00762 5.33e-85 - - - S - - - AAA domain
GDBFNOLI_00764 6.14e-182 - - - L - - - Helicase C-terminal domain protein
GDBFNOLI_00765 4.62e-25 - - - S - - - Protein of unknown function (DUF669)
GDBFNOLI_00766 0.0 - - - S ko:K06919 - ko00000 Phage plasmid primase, P4
GDBFNOLI_00777 3.85e-49 - - - S - - - VRR_NUC
GDBFNOLI_00782 1.34e-62 - - - L - - - HNH nucleases
GDBFNOLI_00783 1.2e-71 - - - L - - - Phage terminase, small subunit
GDBFNOLI_00784 6.84e-10 - - - S - - - HicA toxin of bacterial toxin-antitoxin,
GDBFNOLI_00785 1.57e-61 - - - S - - - HicB_like antitoxin of bacterial toxin-antitoxin system
GDBFNOLI_00786 1.82e-260 - - - S - - - Phage Terminase
GDBFNOLI_00788 2.23e-169 - - - S - - - Phage portal protein
GDBFNOLI_00789 4.37e-110 - 3.4.21.92 - OU ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S14 family
GDBFNOLI_00790 5.87e-67 - - - S - - - Phage capsid family
GDBFNOLI_00798 2.66e-131 - - - L - - - Phage tail tape measure protein TP901
GDBFNOLI_00800 5.6e-158 - - - S - - - Phage minor structural protein
GDBFNOLI_00808 6.5e-51 - - - S - - - Bacteriophage holin of superfamily 6 (Holin_LLH)
GDBFNOLI_00809 8.02e-127 - - - M - - - hydrolase, family 25
GDBFNOLI_00811 1.33e-35 rpmB - - J ko:K02902 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL28 family
GDBFNOLI_00812 8.29e-75 yloU - - S - - - Asp23 family, cell envelope-related function
GDBFNOLI_00813 0.0 yloV - - S ko:K07030 - ko00000 DAK2 domain fusion protein YloV
GDBFNOLI_00814 0.0 recG 3.6.4.12 - L ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
GDBFNOLI_00815 3.69e-233 plsX 2.3.1.15 - I ko:K03621 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
GDBFNOLI_00816 7.32e-46 acpP - - IQ ko:K02078 - ko00000,ko00001 Carrier of the growing fatty acid chain in fatty acid biosynthesis
GDBFNOLI_00817 1.21e-245 oppD - - P ko:K02031,ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
GDBFNOLI_00818 3.27e-229 oppF - - P ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
GDBFNOLI_00819 7.92e-221 oppB - - P ko:K02033,ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
GDBFNOLI_00820 3.74e-182 oppC5 - - P ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDBFNOLI_00821 2.46e-302 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
GDBFNOLI_00822 0.0 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
GDBFNOLI_00823 2.8e-160 rnc 3.1.26.3 - J ko:K03685 ko03008,ko05205,map03008,map05205 ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
GDBFNOLI_00824 0.0 smc - - D ko:K03529 - ko00000,ko03036 Required for chromosome condensation and partitioning
GDBFNOLI_00825 4.69e-226 ftsY - - U ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
GDBFNOLI_00826 0.0 pepD2 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
GDBFNOLI_00827 1.69e-06 - - - - - - - -
GDBFNOLI_00828 2.1e-31 - - - - - - - -
GDBFNOLI_00829 5.41e-172 cysA - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
GDBFNOLI_00830 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
GDBFNOLI_00831 0.0 ctrA - - E ko:K03294 - ko00000 amino acid
GDBFNOLI_00832 5.56e-72 ylxM - - S ko:K09787 - ko00000 Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
GDBFNOLI_00833 1.9e-289 ffh 3.6.5.4 - U ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko01000,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
GDBFNOLI_00834 6.78e-60 rpsP - - J ko:K02959 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bS16 family
GDBFNOLI_00835 2.08e-122 rimM - - J ko:K02860 - ko00000,ko03009 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
GDBFNOLI_00836 1.63e-173 trmD 2.1.1.228 - J ko:K00554 - ko00000,ko01000,ko03016 Belongs to the RNA methyltransferase TrmD family
GDBFNOLI_00837 1.64e-74 rplS - - J ko:K02884 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
GDBFNOLI_00838 4.96e-270 - - - S - - - SLAP domain
GDBFNOLI_00839 1.15e-154 ung2 3.2.2.27 - L ko:K21929 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Uracil-DNA glycosylase
GDBFNOLI_00840 7.18e-187 - - - E - - - GDSL-like Lipase/Acylhydrolase family
GDBFNOLI_00841 9.86e-146 lexA 3.4.21.88 - K ko:K01356 - ko00000,ko00002,ko01000,ko01002,ko03400 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GDBFNOLI_00842 4.16e-51 ynzC - - S - - - UPF0291 protein
GDBFNOLI_00843 1.3e-40 XK26_06720 - - S ko:K09976 - ko00000 Uncharacterised protein family (UPF0154)
GDBFNOLI_00844 0.0 mdlA - - V ko:K06148,ko:K18889 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
GDBFNOLI_00845 0.0 mdlB - - V ko:K06147,ko:K18890 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
GDBFNOLI_00846 0.0 pepO - - O ko:K07386 - ko00000,ko01000,ko01002 Peptidase family M13
GDBFNOLI_00847 8.61e-296 cfa 2.1.1.79 - M ko:K00574 - ko00000,ko01000 cyclopropane-fatty-acyl-phospholipid synthase
GDBFNOLI_00848 1.65e-151 plsC 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Acyltransferase
GDBFNOLI_00849 2.03e-251 yabB 2.1.1.223 - L ko:K07461,ko:K15460 - ko00000,ko01000,ko03016 Methyltransferase small domain
GDBFNOLI_00850 2.21e-180 rpsB - - J ko:K02967 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS2 family
GDBFNOLI_00851 1.76e-235 tsf - - J ko:K02357 - ko00000,ko03012,ko03029 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
GDBFNOLI_00852 5.86e-168 pyrH 2.7.4.22 - F ko:K09903 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphorylation of UMP to UDP
GDBFNOLI_00853 1.22e-121 frr - - J ko:K02838 - ko00000,ko03012 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
GDBFNOLI_00854 6.38e-178 uppS 2.5.1.31 - H ko:K00806 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
GDBFNOLI_00855 3.93e-181 cdsA 2.7.7.41 - I ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 ko00000,ko00001,ko00002,ko01000 Belongs to the CDS family
GDBFNOLI_00856 6.38e-254 rseP - - M ko:K11749 ko02024,ko04112,map02024,map04112 ko00000,ko00001,ko01000,ko01002 zinc metalloprotease
GDBFNOLI_00857 0.0 proS 6.1.1.15 - J ko:K01881 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
GDBFNOLI_00858 0.0 polC 2.7.7.7 - L ko:K03763 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GDBFNOLI_00859 3.4e-108 rimP - - J ko:K09748 - ko00000,ko03009 Required for maturation of 30S ribosomal subunits
GDBFNOLI_00860 9.73e-259 nusA - - K ko:K02600 - ko00000,ko03009,ko03021 Participates in both transcription termination and antitermination
GDBFNOLI_00861 3.75e-63 ylxR - - K ko:K07742 - ko00000 Protein of unknown function (DUF448)
GDBFNOLI_00862 1.61e-64 ylxQ - - J - - - ribosomal protein
GDBFNOLI_00863 0.0 infB - - J ko:K02519 - ko00000,ko03012,ko03029 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
GDBFNOLI_00864 1.67e-79 rbfA - - J ko:K02834 - ko00000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
GDBFNOLI_00865 1.64e-198 truB 5.4.99.25 - J ko:K03177,ko:K03483 - ko00000,ko01000,ko03000,ko03016 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
GDBFNOLI_00866 5.35e-223 ribF 2.7.1.26, 2.7.7.2 - H ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the ribF family
GDBFNOLI_00867 6.02e-247 hrcA - - K ko:K03705 - ko00000,ko03000 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
GDBFNOLI_00868 3.74e-109 grpE - - O ko:K03687 - ko00000,ko03029,ko03110 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
GDBFNOLI_00869 0.0 dnaK - - O ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Heat shock 70 kDa protein
GDBFNOLI_00870 6.87e-277 dnaJ - - O ko:K03686 - ko00000,ko03029,ko03110 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
GDBFNOLI_00871 0.0 lepA - - M ko:K03596 ko05134,map05134 ko00000,ko00001 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
GDBFNOLI_00872 4.04e-130 srtA 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 sortase family
GDBFNOLI_00873 0.0 recJ - - L ko:K07462 ko03410,ko03430,ko03440,map03410,map03430,map03440 ko00000,ko00001,ko01000,ko03400 Single-stranded-DNA-specific exonuclease RecJ
GDBFNOLI_00874 9.45e-121 apt 2.4.2.7 - F ko:K00759 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000,ko04147 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
GDBFNOLI_00875 4.39e-268 - - - S ko:K09963 - ko00000 Bacterial protein of unknown function (DUF871)
GDBFNOLI_00877 5.01e-55 ybhL - - S ko:K06890 - ko00000 Belongs to the BI1 family
GDBFNOLI_00878 4.97e-64 - - - S - - - Metal binding domain of Ada
GDBFNOLI_00879 0.0 - - - P - - - Cation transporter/ATPase, N-terminus
GDBFNOLI_00880 3.03e-177 lysR5 - - K - - - LysR substrate binding domain
GDBFNOLI_00881 2.4e-297 arcA 3.5.3.6 - E ko:K01478 ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130 ko00000,ko00001,ko01000 Arginine
GDBFNOLI_00882 5.39e-84 argF 2.1.3.3 - E ko:K00611 ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
GDBFNOLI_00883 2.01e-135 arcC 2.7.2.2 - E ko:K00926 ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200 ko00000,ko00001,ko01000 Belongs to the carbamate kinase family
GDBFNOLI_00884 1.76e-122 citX 2.7.7.61 - HI ko:K05964 ko02020,map02020 ko00000,ko00001,ko01000 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
GDBFNOLI_00885 3.3e-249 - - - S - - - Sterol carrier protein domain
GDBFNOLI_00886 4.04e-29 - - - - - - - -
GDBFNOLI_00887 6.93e-140 - - - K - - - LysR substrate binding domain
GDBFNOLI_00888 1.13e-126 - - - - - - - -
GDBFNOLI_00889 5.04e-154 - - - G - - - Antibiotic biosynthesis monooxygenase
GDBFNOLI_00890 4.68e-152 - - - - - - - -
GDBFNOLI_00891 8.93e-108 B4168_4126 - - L ko:K07493 - ko00000 Transposase
GDBFNOLI_00892 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
GDBFNOLI_00893 1.15e-64 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
GDBFNOLI_00894 5.51e-35 - - - - - - - -
GDBFNOLI_00895 1.22e-25 - - - G - - - Ribose/Galactose Isomerase
GDBFNOLI_00896 2.04e-68 - - - K - - - sequence-specific DNA binding
GDBFNOLI_00897 5.97e-55 - - - S - - - SnoaL-like domain
GDBFNOLI_00898 0.0 - - - L - - - PLD-like domain
GDBFNOLI_00899 6.83e-133 yrgI 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Histidine phosphatase superfamily (branch 1)
GDBFNOLI_00900 0.0 lysC 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the aspartokinase family
GDBFNOLI_00901 0.0 thrC 4.2.3.1 - E ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Threonine synthase
GDBFNOLI_00902 2.95e-283 hom 1.1.1.3 - E ko:K00003 ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 homoserine dehydrogenase
GDBFNOLI_00903 3.06e-202 thrB 2.7.1.39 - F ko:K00872 ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
GDBFNOLI_00904 5.47e-151 - - - - - - - -
GDBFNOLI_00905 2.83e-205 yitT - - S - - - Uncharacterised 5xTM membrane BCR, YitT family COG1284
GDBFNOLI_00907 1.22e-136 msrA 1.8.4.11, 1.8.4.12 - O ko:K07304,ko:K12267 - ko00000,ko01000 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GDBFNOLI_00908 2e-149 - - - S - - - Peptidase family M23
GDBFNOLI_00909 1.34e-22 - - - S - - - CRISPR-associated protein (Cas_Csn2)
GDBFNOLI_00910 6.94e-199 yqfL 2.7.11.33, 2.7.4.28 - F ko:K09773 - ko00000,ko01000 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
GDBFNOLI_00911 4.83e-30 rpsU - - J ko:K02970 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bS21 family
GDBFNOLI_00912 1.08e-92 yqeY - - S ko:K09117 - ko00000 YqeY-like protein
GDBFNOLI_00913 1.74e-224 phoH - - T ko:K06217 - ko00000 phosphate starvation-inducible protein PhoH
GDBFNOLI_00914 3.58e-129 ybeY - - S ko:K07042 - ko00000,ko03009 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
GDBFNOLI_00915 1.37e-216 era - - S ko:K03595 - ko00000,ko03009,ko03029 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
GDBFNOLI_00916 4.11e-173 recO - - L ko:K03584 ko03440,map03440 ko00000,ko00001,ko03400 Involved in DNA repair and RecF pathway recombination
GDBFNOLI_00917 9.03e-229 glyQ 6.1.1.14 - J ko:K01878 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 glycyl-tRNA synthetase alpha subunit
GDBFNOLI_00918 0.0 glyS 6.1.1.14 - J ko:K01879 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Glycyl-tRNA synthetase beta subunit
GDBFNOLI_00919 0.0 dnaG - - L ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
GDBFNOLI_00920 9e-255 sigA - - K ko:K03086 - ko00000,ko03021 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
GDBFNOLI_00921 4.34e-166 - - - S - - - Peptidase family M23
GDBFNOLI_00922 5.37e-106 - 3.6.1.55 - F ko:K03574 - ko00000,ko01000,ko03400 NUDIX domain
GDBFNOLI_00923 2.8e-159 trmK 2.1.1.217 - S ko:K06967 - ko00000,ko01000,ko03016 SAM-dependent methyltransferase
GDBFNOLI_00924 8.12e-196 yqfO - - S - - - Belongs to the GTP cyclohydrolase I type 2 NIF3 family
GDBFNOLI_00925 2.86e-307 pepT 3.4.11.4 - E ko:K01258 - ko00000,ko01000,ko01002 Cleaves the N-terminal amino acid of tripeptides
GDBFNOLI_00926 1.25e-80 lexA - - K ko:K07979 - ko00000,ko03000 Transcriptional regulator, GntR family
GDBFNOLI_00927 1.33e-161 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
GDBFNOLI_00928 1.65e-180 - - - - - - - -
GDBFNOLI_00929 2.54e-176 - - - - - - - -
GDBFNOLI_00930 3.85e-193 - - - - - - - -
GDBFNOLI_00931 3.49e-36 - - - - - - - -
GDBFNOLI_00932 1.27e-133 lepB 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
GDBFNOLI_00933 4.01e-184 - - - - - - - -
GDBFNOLI_00934 4.4e-215 - - - - - - - -
GDBFNOLI_00935 0.0 rsmF - - J - - - NOL1 NOP2 sun family protein
GDBFNOLI_00936 1.28e-150 - 3.1.3.102, 3.1.3.104, 3.1.3.23 - G ko:K07757,ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Sucrose-6F-phosphate phosphohydrolase
GDBFNOLI_00937 4.87e-236 fni 5.3.3.2 - C ko:K01823 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
GDBFNOLI_00938 6.67e-261 mvaK2 2.7.4.2 - I ko:K00938 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 phosphomevalonate kinase
GDBFNOLI_00939 5.87e-228 mvaD 4.1.1.33 - I ko:K01597 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 diphosphomevalonate decarboxylase
GDBFNOLI_00940 3.02e-173 mvk 2.7.1.36 - I ko:K00869 ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146 ko00000,ko00001,ko00002,ko01000 GHMP kinases N terminal domain
GDBFNOLI_00941 0.0 rexB 3.6.4.12 - L ko:K16899 - ko00000,ko01000,ko03400 The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
GDBFNOLI_00942 0.0 addA 3.6.4.12 - L ko:K16898 - ko00000,ko01000,ko03400 ATP-dependent helicase nuclease subunit A
GDBFNOLI_00943 0.0 dinG 3.6.4.12 - L ko:K03722 - ko00000,ko01000,ko03400 helicase involved in DNA repair and perhaps also replication
GDBFNOLI_00944 1.09e-191 - - - L - - - Belongs to the 'phage' integrase family
GDBFNOLI_00949 2.28e-19 - - - - - - - -
GDBFNOLI_00950 4.22e-76 - - - - - - - -
GDBFNOLI_00952 1.34e-13 - - - S - - - sequence-specific DNA binding
GDBFNOLI_00954 1.28e-29 - - - K - - - Helix-turn-helix XRE-family like proteins
GDBFNOLI_00956 2.4e-115 - - - S - - - AntA/AntB antirepressor
GDBFNOLI_00962 2.36e-08 - - - K - - - DNA-binding protein
GDBFNOLI_00964 4.65e-35 - - - - - - - -
GDBFNOLI_00966 5.94e-73 - - - S - - - Protein of unknown function (DUF1071)
GDBFNOLI_00967 2.55e-40 - - - S - - - Conserved phage C-terminus (Phg_2220_C)
GDBFNOLI_00968 6.52e-64 - - - L ko:K02315 - ko00000,ko03032 IstB-like ATP binding protein
GDBFNOLI_00974 5.99e-52 - - - L - - - Endodeoxyribonuclease RusA
GDBFNOLI_00975 1.51e-10 - - - - - - - -
GDBFNOLI_00983 8.27e-46 - - - S - - - HicB_like antitoxin of bacterial toxin-antitoxin system
GDBFNOLI_00984 7.69e-16 - - - N - - - HicA toxin of bacterial toxin-antitoxin,
GDBFNOLI_00985 3.6e-47 - - - L ko:K07474 - ko00000 Terminase small subunit
GDBFNOLI_00986 9.32e-289 - - - S - - - Terminase-like family
GDBFNOLI_00987 6.56e-176 - - - S ko:K09961 - ko00000 Protein of unknown function (DUF1073)
GDBFNOLI_00988 3.22e-124 - - - S - - - Phage Mu protein F like protein
GDBFNOLI_00989 1.14e-16 - - - S - - - Lysin motif
GDBFNOLI_00990 2.77e-137 - - - S ko:K09960 - ko00000 Uncharacterized protein conserved in bacteria (DUF2213)
GDBFNOLI_00991 2.06e-75 - - - - - - - -
GDBFNOLI_00992 1.83e-181 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2184)
GDBFNOLI_00994 2.18e-96 - - - - - - - -
GDBFNOLI_00995 1.8e-59 - - - - - - - -
GDBFNOLI_00996 7.95e-69 - - - - - - - -
GDBFNOLI_00997 7.86e-194 - - - S - - - Protein of unknown function (DUF3383)
GDBFNOLI_00998 1.33e-73 - - - - - - - -
GDBFNOLI_01001 0.0 - - - L - - - Phage tail tape measure protein TP901
GDBFNOLI_01002 1.06e-69 - - - M - - - LysM domain
GDBFNOLI_01003 6.91e-61 - - - - - - - -
GDBFNOLI_01004 1.11e-128 - - - - - - - -
GDBFNOLI_01005 4.6e-63 - - - - - - - -
GDBFNOLI_01006 1.37e-42 - - - - - - - -
GDBFNOLI_01007 2.78e-156 - - - S - - - Baseplate J-like protein
GDBFNOLI_01009 3.74e-221 - - - M - - - Glycosyl hydrolases family 25
GDBFNOLI_01010 3.43e-11 - - - T ko:K07172 - ko00000,ko02048 SpoVT / AbrB like domain
GDBFNOLI_01011 3.3e-16 - - - T - - - PemK-like, MazF-like toxin of type II toxin-antitoxin system
GDBFNOLI_01012 1.66e-116 ypmB - - S - - - Protein conserved in bacteria
GDBFNOLI_01013 0.0 asnS 6.1.1.22 - J ko:K01893 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Asparaginyl-tRNA synthetase
GDBFNOLI_01014 6.91e-149 dnaD - - L ko:K02086 - ko00000 DnaD domain protein
GDBFNOLI_01015 1.92e-148 nth 4.2.99.18 - L ko:K10773 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GDBFNOLI_01016 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M ko:K05366 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 penicillin-binding protein 1A
GDBFNOLI_01017 8.47e-152 recU - - L ko:K03700 - ko00000,ko03400 Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
GDBFNOLI_01018 1.18e-139 ypsA - - S - - - Belongs to the UPF0398 family
GDBFNOLI_01019 1.85e-90 gpsB - - D - - - Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
GDBFNOLI_01020 1.68e-277 ypsC - - L ko:K07444 - ko00000,ko01000 Belongs to the methyltransferase superfamily
GDBFNOLI_01021 6.74e-309 cpdA - - S - - - Calcineurin-like phosphoesterase
GDBFNOLI_01022 9.67e-104 - - - - - - - -
GDBFNOLI_01023 9.91e-150 - 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Ham1 family
GDBFNOLI_01024 3.56e-47 - - - - - - - -
GDBFNOLI_01025 4.13e-83 - - - - - - - -
GDBFNOLI_01028 1.51e-159 - - - - - - - -
GDBFNOLI_01029 1.61e-125 pncA - - Q - - - Isochorismatase family
GDBFNOLI_01030 1.73e-48 - - - - - - - -
GDBFNOLI_01031 0.0 snf - - KL - - - domain protein
GDBFNOLI_01032 9.39e-141 plsY 2.3.1.15 - I ko:K08591 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
GDBFNOLI_01033 0.0 parE - - L ko:K02622 - ko00000,ko01000,ko02048,ko03032,ko03036 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
GDBFNOLI_01034 0.0 parC - - L ko:K02621 - ko00000,ko01000,ko02048,ko03032,ko03036 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
GDBFNOLI_01035 2.29e-227 - - - K - - - Transcriptional regulator
GDBFNOLI_01036 1.94e-217 ppaC 3.6.1.1 - C ko:K15986 ko00190,map00190 ko00000,ko00001,ko01000 inorganic pyrophosphatase
GDBFNOLI_01037 3.45e-76 - - - L ko:K07484 - ko00000 IS66 Orf2 like protein
GDBFNOLI_01038 8.17e-18 - - - S - - - Transposase C of IS166 homeodomain
GDBFNOLI_01039 4.09e-11 - - - L ko:K07496 - ko00000 Transposase
GDBFNOLI_01040 2.66e-157 - - - S - - - Protein of unknown function (DUF1275)
GDBFNOLI_01041 7.89e-268 - - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
GDBFNOLI_01042 2.07e-140 XK27_00160 - - S - - - Domain of unknown function (DUF5052)
GDBFNOLI_01043 1.5e-90 - - - - - - - -
GDBFNOLI_01044 2.92e-257 xerS - - L ko:K03733 - ko00000,ko03036 Belongs to the 'phage' integrase family
GDBFNOLI_01045 0.0 mutS1 - - L ko:K07456 ko03430,map03430 ko00000,ko00001,ko03400 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
GDBFNOLI_01046 1.96e-196 - - - S - - - EDD domain protein, DegV family
GDBFNOLI_01047 1.34e-84 - - - - - - - -
GDBFNOLI_01048 0.0 FbpA - - K - - - Fibronectin-binding protein
GDBFNOLI_01049 0.0 carB1 6.3.5.5 - F ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase
GDBFNOLI_01050 4.13e-255 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase glutamine chain
GDBFNOLI_01051 3.24e-221 rluD 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
GDBFNOLI_01052 3.16e-102 lspA 3.4.23.36 - MU ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 This protein specifically catalyzes the removal of signal peptides from prolipoproteins
GDBFNOLI_01053 0.0 fhs 6.3.4.3 - F ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Belongs to the formate--tetrahydrofolate ligase family
GDBFNOLI_01054 1.61e-70 - - - - - - - -
GDBFNOLI_01056 8.81e-40 - - - M - - - Mycoplasma protein of unknown function, DUF285
GDBFNOLI_01057 9.86e-146 - - - F ko:K15051 - ko00000 DNA/RNA non-specific endonuclease
GDBFNOLI_01058 3.39e-88 - - - S ko:K06915 - ko00000 cog cog0433
GDBFNOLI_01059 2.08e-118 - 3.1.21.3 - V ko:K01154 - ko00000,ko01000,ko02048 Type I restriction modification DNA specificity domain
GDBFNOLI_01060 0.0 hsdM 2.1.1.72 - V ko:K03427 - ko00000,ko01000,ko02048 type I restriction-modification system
GDBFNOLI_01061 5.22e-54 - - - S - - - RloB-like protein
GDBFNOLI_01062 1.35e-208 - - - S ko:K06926 - ko00000 AAA domain, putative AbiEii toxin, Type IV TA system
GDBFNOLI_01063 0.0 hsdR 3.1.21.3 - L ko:K01153 - ko00000,ko01000,ko02048 DEAD/DEAH box helicase
GDBFNOLI_01064 0.0 - - - S - - - SLAP domain
GDBFNOLI_01066 5.93e-302 XK27_01810 - - S - - - Calcineurin-like phosphoesterase
GDBFNOLI_01067 1.43e-80 - - - S ko:K07006 - ko00000 Pyridoxamine 5'-phosphate oxidase
GDBFNOLI_01068 1.65e-303 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDBFNOLI_01070 0.0 treC 3.2.1.93 GH13 G ko:K01226 ko00500,map00500 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain protein
GDBFNOLI_01071 4.21e-129 treR - - K ko:K03486 - ko00000,ko03000 UTRA
GDBFNOLI_01072 2.02e-137 treB - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
GDBFNOLI_01073 9.63e-204 treB - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
GDBFNOLI_01074 2.76e-86 spxA - - K ko:K16509 - ko00000 Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
GDBFNOLI_01075 1.38e-242 - - - L ko:K07478 - ko00000 AAA C-terminal domain
GDBFNOLI_01076 0.0 yqjE 3.4.11.14, 3.4.11.4 - E ko:K01258,ko:K01263 - ko00000,ko01000,ko01002 Cleaves the N-terminal amino acid of tripeptides
GDBFNOLI_01077 5.74e-108 - - - K - - - Acetyltransferase (GNAT) domain
GDBFNOLI_01078 1.87e-290 - - - S - - - Putative peptidoglycan binding domain
GDBFNOLI_01079 7.89e-124 - - - S - - - ECF-type riboflavin transporter, S component
GDBFNOLI_01080 3.1e-127 pdxK 2.7.1.35 - H ko:K00868 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko01000 Phosphomethylpyrimidine kinase
GDBFNOLI_01081 1.59e-259 pbpX1 - - V - - - Beta-lactamase
GDBFNOLI_01082 1.12e-149 maa3 2.3.1.79 - S ko:K00661 - ko00000,ko01000 transferase hexapeptide repeat
GDBFNOLI_01083 1.12e-104 yvbK - - K - - - COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
GDBFNOLI_01084 4.87e-262 - - - L - - - COG2826 Transposase and inactivated derivatives, IS30 family
GDBFNOLI_01085 5.94e-148 - - - I - - - Acid phosphatase homologues
GDBFNOLI_01086 2.25e-241 mmuM 2.1.1.10 - H ko:K00547 ko00270,ko01100,ko01110,map00270,map01100,map01110 ko00000,ko00001,ko01000 homocysteine S-methyltransferase
GDBFNOLI_01087 0.0 uvrA2 - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 excinuclease ABC, A subunit
GDBFNOLI_01088 3.6e-106 - - - C - - - Flavodoxin
GDBFNOLI_01089 0.0 recQ 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
GDBFNOLI_01090 4.97e-311 ynbB - - P - - - aluminum resistance
GDBFNOLI_01091 0.0 speA 4.1.1.17, 4.1.1.18, 4.1.1.19 - E ko:K01581,ko:K01582,ko:K01585 ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Orn/Lys/Arg decarboxylase, C-terminal domain
GDBFNOLI_01092 0.0 - - - E - - - Amino acid permease
GDBFNOLI_01093 7.88e-121 - - - C - - - Pyridoxamine 5'-phosphate oxidase
GDBFNOLI_01094 0.0 pepV 3.5.1.18 - E ko:K01270,ko:K01274,ko:K01439 ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000,ko01002 dipeptidase PepV
GDBFNOLI_01095 3.03e-145 ybgF - - E ko:K02205,ko:K03293,ko:K16235,ko:K16236 - ko00000,ko02000 amino acid
GDBFNOLI_01096 1.31e-16 mmuM 2.1.1.10 - H ko:K00547 ko00270,ko01100,ko01110,map00270,map01100,map01110 ko00000,ko00001,ko01000 homocysteine S-methyltransferase
GDBFNOLI_01097 2.95e-84 crcB - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GDBFNOLI_01098 7.64e-88 crcB1 - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GDBFNOLI_01099 2.15e-194 - - - L - - - Phage integrase, N-terminal SAM-like domain
GDBFNOLI_01100 7.7e-126 - - - L - - - Helix-turn-helix domain
GDBFNOLI_01101 1.35e-149 - - - L ko:K07497 - ko00000 hmm pf00665
GDBFNOLI_01102 1.8e-36 - - - M - - - LysM domain protein
GDBFNOLI_01103 9.44e-63 - - - M - - - LysM domain protein
GDBFNOLI_01104 6.18e-89 - - - S - - - ORF6C domain
GDBFNOLI_01109 9.64e-54 - - - Q - - - methyltransferase
GDBFNOLI_01120 5.95e-24 radC - - E ko:K03630 - ko00000 Belongs to the UPF0758 family
GDBFNOLI_01121 2.43e-136 - - - L - - - Belongs to the N(4) N(6)-methyltransferase family
GDBFNOLI_01122 2.8e-35 - - - K - - - Conserved phage C-terminus (Phg_2220_C)
GDBFNOLI_01123 8.36e-57 - - - S - - - ERF superfamily
GDBFNOLI_01124 6.37e-65 - - - S - - - Protein of unknown function (DUF1351)
GDBFNOLI_01132 6.19e-16 - - - K - - - Helix-turn-helix XRE-family like proteins
GDBFNOLI_01133 5.84e-21 - - - S - - - protein disulfide oxidoreductase activity
GDBFNOLI_01135 3.93e-05 - - - - - - - -
GDBFNOLI_01136 9.62e-113 - - - L - - - Belongs to the 'phage' integrase family
GDBFNOLI_01137 9.11e-110 - - - C - - - Aldo keto reductase
GDBFNOLI_01138 9.4e-232 lacX 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Aldose 1-epimerase
GDBFNOLI_01139 1.4e-313 hslU - - O ko:K03667 - ko00000,ko03110 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
GDBFNOLI_01140 4.67e-116 hslV 3.4.25.2 - O ko:K01419 - ko00000,ko01000,ko01002 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
GDBFNOLI_01141 2.09e-180 xerC - - D ko:K03733,ko:K04763 - ko00000,ko03036 Phage integrase, N-terminal SAM-like domain
GDBFNOLI_01142 8.35e-315 trmFO 2.1.1.74 - J ko:K04094 - ko00000,ko01000,ko03016,ko03036 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
GDBFNOLI_01143 0.0 topA 5.99.1.2 - L ko:K03168 - ko00000,ko01000,ko03032,ko03400 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GDBFNOLI_01144 1.5e-195 dprA - - LU ko:K04096 - ko00000 DNA protecting protein DprA
GDBFNOLI_01145 1e-168 rnhB 3.1.26.4 - L ko:K03470 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GDBFNOLI_01146 2.15e-198 rbgA - - S ko:K14540 - ko00000,ko03009 Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
GDBFNOLI_01147 2.4e-118 nhaP4 - - P ko:K03316 - ko00000 Sodium proton antiporter
GDBFNOLI_01148 7.2e-49 nhaP4 - - P ko:K03316 - ko00000 Sodium proton antiporter
GDBFNOLI_01149 3.67e-88 - - - P - - - NhaP-type Na H and K H
GDBFNOLI_01150 9.85e-49 yozE - - S - - - Belongs to the UPF0346 family
GDBFNOLI_01151 8.83e-187 degV3 - - S - - - Uncharacterised protein, DegV family COG1307
GDBFNOLI_01152 1.8e-143 hlyIII - - S ko:K11068 - ko00000,ko02042 protein, hemolysin III
GDBFNOLI_01153 5.13e-287 cca 2.7.7.72 - J ko:K00974 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
GDBFNOLI_01154 3.86e-204 XK27_10395 - - S - - - Uncharacterised 5xTM membrane BCR, YitT family COG1284
GDBFNOLI_01155 9.58e-112 - 3.4.21.96 - S ko:K01361 - ko00000,ko01000,ko01002,ko03110 SLAP domain
GDBFNOLI_01156 6.08e-161 yagE - - E - - - Amino acid permease
GDBFNOLI_01157 8.49e-85 - - - E - - - amino acid
GDBFNOLI_01158 2.16e-193 - 2.3.1.81 - V ko:K00662 - ko00000,ko01000,ko01504 Aminoglycoside 3-N-acetyltransferase
GDBFNOLI_01159 6.64e-185 - - - F - - - Phosphorylase superfamily
GDBFNOLI_01160 1.05e-176 - - - F - - - Phosphorylase superfamily
GDBFNOLI_01161 9.82e-80 - - - F - - - NUDIX domain
GDBFNOLI_01162 1.83e-103 - - - S - - - AAA domain
GDBFNOLI_01163 1.5e-150 - - - S - - - F420-0:Gamma-glutamyl ligase
GDBFNOLI_01164 1.87e-170 - - - S - - - Alpha/beta hydrolase family
GDBFNOLI_01165 2.95e-123 rimL - - J ko:K03817 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
GDBFNOLI_01166 2e-299 cls - - I ko:K06131 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GDBFNOLI_01167 1.43e-292 XK27_05225 - - S - - - Tetratricopeptide repeat protein
GDBFNOLI_01168 8.21e-57 hup - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
GDBFNOLI_01169 5.45e-314 der - - S ko:K03977 - ko00000,ko03009 GTPase that plays an essential role in the late steps of ribosome biogenesis
GDBFNOLI_01170 1.4e-281 rpsA - - J ko:K02945 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein S1
GDBFNOLI_01171 1.96e-148 cmk 2.7.4.25 - F ko:K00945 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the cytidylate kinase family. Type 1 subfamily
GDBFNOLI_01172 1.13e-41 - - - M - - - Lysin motif
GDBFNOLI_01173 1.64e-143 ribU - - U - - - Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
GDBFNOLI_01174 4.65e-168 rluB 5.4.99.22 - J ko:K06178 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
GDBFNOLI_01175 7.57e-135 scpB - - D ko:K06024 - ko00000,ko03036 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
GDBFNOLI_01176 1.81e-169 scpA - - D ko:K05896 - ko00000,ko03036 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
GDBFNOLI_01177 1.13e-81 ribT - - K ko:K02859 - ko00000 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
GDBFNOLI_01178 6.74e-213 xerD - - D ko:K04763 - ko00000,ko03036 recombinase XerD
GDBFNOLI_01179 1.21e-213 yitL - - S ko:K00243 - ko00000 S1 domain
GDBFNOLI_01180 0.0 pyk 2.7.1.40 - G ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the pyruvate kinase family
GDBFNOLI_01181 5.46e-233 pfkA 2.7.1.11 - F ko:K00850 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230 ko00000,ko00001,ko00002,ko01000,ko01009,ko03019 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
GDBFNOLI_01182 0.0 dnaE 2.7.7.7 - L ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase
GDBFNOLI_01183 1.25e-38 - - - S - - - Protein of unknown function (DUF2929)
GDBFNOLI_01184 0.0 yfkN 3.1.3.6, 3.1.4.16 - F ko:K01119 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the 5'-nucleotidase family
GDBFNOLI_01185 5.14e-38 rpmF - - J ko:K02911 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bL32 family
GDBFNOLI_01186 3.57e-47 - - - S - - - Lipopolysaccharide assembly protein A domain
GDBFNOLI_01187 1.18e-183 - - - S ko:K07124 - ko00000 Belongs to the short-chain dehydrogenases reductases (SDR) family
GDBFNOLI_01188 6.82e-223 rnz 3.1.26.11 - J ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
GDBFNOLI_01189 0.0 oatA - - I - - - Acyltransferase
GDBFNOLI_01190 1.55e-308 obg - - S ko:K03979 - ko00000,ko01000,ko03009 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
GDBFNOLI_01191 0.0 uvrC - - L ko:K03703 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
GDBFNOLI_01192 1.58e-140 yngC - - S - - - SNARE associated Golgi protein
GDBFNOLI_01193 0.0 yhdG - - E ko:K03294 - ko00000 Amino Acid
GDBFNOLI_01194 1.14e-230 gyaR 1.1.1.26, 1.1.1.399, 1.1.1.95 - CH ko:K00015,ko:K00058 ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GDBFNOLI_01195 1.83e-190 yxeH - - S - - - hydrolase
GDBFNOLI_01196 6.32e-41 - - - S - - - reductase
GDBFNOLI_01197 2.98e-50 - - - S - - - reductase
GDBFNOLI_01198 1.19e-43 - - - S - - - reductase
GDBFNOLI_01199 4.66e-277 coaBC 4.1.1.36, 6.3.2.5 - H ko:K01598,ko:K13038 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
GDBFNOLI_01200 5.51e-284 aspC - - E ko:K00841 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
GDBFNOLI_01201 0.0 aspS 6.1.1.12 - J ko:K01876 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
GDBFNOLI_01202 2.03e-310 hisS 6.1.1.21 - J ko:K01892 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 histidyl-tRNA synthetase
GDBFNOLI_01203 1.8e-99 dtd - - J ko:K07560 - ko00000,ko01000,ko03016 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
GDBFNOLI_01204 0.0 relA 2.7.6.5 - KT ko:K00951 ko00230,map00230 ko00000,ko00001,ko01000 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GDBFNOLI_01205 3.8e-80 - - - - - - - -
GDBFNOLI_01206 4.8e-224 prmA - - J ko:K02687 - ko00000,ko01000,ko03009 Ribosomal protein L11 methyltransferase
GDBFNOLI_01207 1.3e-115 ybaK - - S ko:K03976 - ko00000,ko01000,ko03016 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GDBFNOLI_01208 5.26e-15 - - - - - - - -
GDBFNOLI_01210 9.28e-317 - - - S - - - Putative threonine/serine exporter
GDBFNOLI_01211 1.05e-226 citR - - K - - - Putative sugar-binding domain
GDBFNOLI_01212 2.41e-66 - - - - - - - -
GDBFNOLI_01213 7.91e-14 - - - - - - - -
GDBFNOLI_01214 8.1e-87 - - - S - - - Domain of unknown function DUF1828
GDBFNOLI_01215 5.38e-125 - - - S ko:K16924 - ko00000,ko00002,ko02000 UPF0397 protein
GDBFNOLI_01216 0.0 ykoD - - P ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
GDBFNOLI_01217 2.58e-189 cbiQ - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 cobalt transport
GDBFNOLI_01218 9.9e-30 - - - - - - - -
GDBFNOLI_01219 1.24e-93 ytwI - - S - - - Protein of unknown function (DUF441)
GDBFNOLI_01220 0.0 citF 2.8.3.10 - H ko:K01643 ko02020,map02020 ko00000,ko00001,ko01000 Citrate (pro-3S)-lyase alpha chain
GDBFNOLI_01221 1.79e-214 citE 4.1.3.34 - G ko:K01644 ko02020,map02020 ko00000,ko00001,ko01000 Belongs to the HpcH HpaI aldolase family
GDBFNOLI_01222 1.6e-59 citD - - C ko:K01646 ko02020,map02020 ko00000,ko00001 Covalent carrier of the coenzyme of citrate lyase
GDBFNOLI_01223 5.17e-249 citC 6.2.1.22 - H ko:K01910 ko02020,map02020 ko00000,ko00001,ko01000 Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
GDBFNOLI_01224 2.56e-196 - - - I - - - Alpha/beta hydrolase family
GDBFNOLI_01225 0.0 citP - - P ko:K03319 - ko00000 Sodium:sulfate symporter transmembrane region
GDBFNOLI_01226 1.76e-169 - - - H - - - Aldolase/RraA
GDBFNOLI_01227 0.0 pepC4 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
GDBFNOLI_01228 1.66e-217 ldh 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily. LDH family
GDBFNOLI_01229 0.0 frdA 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
GDBFNOLI_01230 0.0 fumC 4.2.1.2 - C ko:K01679 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211 ko00000,ko00001,ko00002,ko01000 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
GDBFNOLI_01231 3.32e-122 metI - - P ko:K02072 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
GDBFNOLI_01232 3.87e-241 metN - - P ko:K02071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GDBFNOLI_01233 2.16e-205 metQ - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the nlpA lipoprotein family
GDBFNOLI_01234 2.57e-223 - - - F ko:K15051 - ko00000 DNA/RNA non-specific endonuclease
GDBFNOLI_01235 0.0 aha1 - - P ko:K12952 - ko00000,ko01000 E1-E2 ATPase
GDBFNOLI_01236 7.89e-119 folA 1.5.1.3 - H ko:K00287 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
GDBFNOLI_01237 2.99e-230 thyA 2.1.1.45 - F ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
GDBFNOLI_01238 1.8e-316 yifK - - E ko:K03293 - ko00000 Amino acid permease
GDBFNOLI_01239 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
GDBFNOLI_01240 1.58e-10 - - - V ko:K06148 - ko00000,ko02000 ABC-type multidrug transport system, ATPase and permease components
GDBFNOLI_01241 0.0 - - - P ko:K06148 - ko00000,ko02000 ABC transporter
GDBFNOLI_01242 2.46e-48 - - - - - - - -
GDBFNOLI_01244 1.46e-161 - - - S - - - Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
GDBFNOLI_01245 4.6e-113 - - - K - - - GNAT family
GDBFNOLI_01246 5.25e-258 XK27_00915 - - C - - - Luciferase-like monooxygenase
GDBFNOLI_01247 4.45e-156 rbtT - - P ko:K13021 - ko00000,ko02000 Major Facilitator Superfamily
GDBFNOLI_01248 2.81e-76 - - - EGP - - - Major Facilitator
GDBFNOLI_01249 0.0 - - - L - - - Plasmid pRiA4b ORF-3-like protein
GDBFNOLI_01250 3.67e-310 brnQ - - U ko:K03311 - ko00000 Component of the transport system for branched-chain amino acids
GDBFNOLI_01251 6.21e-153 yjhB 3.6.1.13 - F ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 NUDIX domain
GDBFNOLI_01252 1.53e-142 ltrA - - S - - - Bacterial low temperature requirement A protein (LtrA)
GDBFNOLI_01253 5.75e-152 yjcA - - S ko:K19350 ko02010,map02010 ko00000,ko00001,ko01504,ko02000 ABC transporter
GDBFNOLI_01254 6.44e-257 ribD 1.1.1.193, 3.5.4.26 - H ko:K11752 ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024 ko00000,ko00001,ko00002,ko01000 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
GDBFNOLI_01255 2.25e-137 ribE 2.5.1.9 - H ko:K00793 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Riboflavin synthase
GDBFNOLI_01256 4.27e-163 ribBA 3.5.4.25, 4.1.99.12 - H ko:K14652 ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
GDBFNOLI_01257 1.34e-103 ribH 2.5.1.78 - H ko:K00794 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
GDBFNOLI_01258 1.32e-114 - 2.7.7.49 - L ko:K00986 - ko00000,ko01000 PFAM RNA-directed DNA polymerase (Reverse transcriptase)
GDBFNOLI_01259 1.16e-13 - - - L - - - Psort location Cytoplasmic, score
GDBFNOLI_01260 2.43e-95 - - - S ko:K11621 ko02020,map02020 ko00000,ko00001 Putative adhesin
GDBFNOLI_01261 2.33e-130 - - - S ko:K07025 - ko00000 Haloacid dehalogenase-like hydrolase
GDBFNOLI_01262 3.87e-15 - 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FMN_bind
GDBFNOLI_01263 1.63e-109 dps - - P ko:K04047 - ko00000,ko03036 Belongs to the Dps family
GDBFNOLI_01264 1.73e-227 - - - S - - - Conserved hypothetical protein 698
GDBFNOLI_01266 5.16e-133 cbh 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
GDBFNOLI_01267 1.94e-130 - - - I - - - PAP2 superfamily
GDBFNOLI_01268 1.23e-187 - - - S - - - Uncharacterised protein, DegV family COG1307
GDBFNOLI_01269 1.43e-310 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
GDBFNOLI_01270 8.85e-94 - - - S - - - Domain of unknown function (DUF4767)
GDBFNOLI_01271 2.08e-95 yfhC - - C - - - nitroreductase
GDBFNOLI_01272 8.72e-258 pbg6 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
GDBFNOLI_01273 1.31e-56 pbg6 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
GDBFNOLI_01274 4.06e-39 pts23C - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GDBFNOLI_01275 4.22e-288 pts23C - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GDBFNOLI_01276 2.3e-169 - - - K ko:K03492 - ko00000,ko03000 UTRA
GDBFNOLI_01277 2.15e-36 - 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
GDBFNOLI_01278 5.89e-303 - 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
GDBFNOLI_01279 2.73e-92 - - - S - - - Domain of unknown function (DUF3284)
GDBFNOLI_01280 1.64e-215 celD - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GDBFNOLI_01281 4.06e-88 celD - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GDBFNOLI_01282 1.33e-92 - - - - - - - -
GDBFNOLI_01283 9.21e-78 celC 2.7.1.196, 2.7.1.205 - G ko:K02759 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose Cellobiose specific IIA subunit
GDBFNOLI_01284 2.19e-73 pts20B 2.7.1.196, 2.7.1.205 - G ko:K02760 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
GDBFNOLI_01285 7.72e-165 - - - K ko:K03492 - ko00000,ko03000 UTRA domain
GDBFNOLI_01286 0.0 pbg4 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
GDBFNOLI_01287 3.41e-110 alkD - - L - - - DNA alkylation repair enzyme
GDBFNOLI_01288 1.37e-220 iunH 3.2.2.1 - F ko:K01239 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 inosine-uridine preferring nucleoside hydrolase
GDBFNOLI_01289 1.23e-105 - - - - - - - -
GDBFNOLI_01290 1.83e-54 - - - C - - - FMN_bind
GDBFNOLI_01291 0.0 - - - I - - - Protein of unknown function (DUF2974)
GDBFNOLI_01292 4.2e-249 pbpX1 - - V - - - Beta-lactamase
GDBFNOLI_01293 2.48e-252 asd 1.2.1.11 - E ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GDBFNOLI_01294 9.03e-277 aspC - - E ko:K00841 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
GDBFNOLI_01295 6.89e-185 dapB 1.17.1.8 - E ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
GDBFNOLI_01296 3.66e-225 dapA 4.3.3.7 - E ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GDBFNOLI_01297 3.29e-280 hipO 3.5.1.47 - E ko:K05823 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
GDBFNOLI_01298 8.62e-105 dapH 2.3.1.117, 2.3.1.89 - E ko:K00674,ko:K05822 ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
GDBFNOLI_01299 1.39e-312 lysA 4.1.1.20 - E ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
GDBFNOLI_01300 0.0 lysC 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the aspartokinase family
GDBFNOLI_01301 6.25e-246 dapF 5.1.1.7 - E ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
GDBFNOLI_01302 1.27e-220 potE - - E - - - Amino Acid
GDBFNOLI_01303 2.58e-48 potE - - E - - - Amino Acid
GDBFNOLI_01304 1.59e-136 engB - - D ko:K03978 - ko00000,ko03036 Necessary for normal cell division and for the maintenance of normal septation
GDBFNOLI_01305 3.04e-297 clpX - - O ko:K03544 ko04112,map04112 ko00000,ko00001,ko03110 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
GDBFNOLI_01306 2.56e-291 tig - - D ko:K03545 - ko00000 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
GDBFNOLI_01307 5.76e-287 tuf - - J ko:K02358,ko:K15771 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GDBFNOLI_01308 5.43e-191 - - - - - - - -
GDBFNOLI_01309 0.0 rnjB - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GDBFNOLI_01310 7.11e-57 rpsO - - J ko:K02956 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
GDBFNOLI_01311 3.64e-46 rpsT - - J ko:K02968 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 16S ribosomal RNA
GDBFNOLI_01312 2.57e-226 holA 2.7.7.7 - L ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III delta subunit
GDBFNOLI_01313 0.0 comEC - - S ko:K02238 - ko00000,ko00002,ko02044 Competence protein ComEC
GDBFNOLI_01314 2.7e-126 comEA - - L ko:K02237 - ko00000,ko00002,ko02044 Competence protein ComEA
GDBFNOLI_01315 1.42e-244 lon - - T ko:K07177 ko02024,map02024 ko00000,ko00001,ko01002 Belongs to the peptidase S16 family
GDBFNOLI_01316 7.07e-107 coaD 2.7.7.3 - H ko:K00954 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
GDBFNOLI_01317 5.21e-126 rsmD 2.1.1.171 - L ko:K08316 - ko00000,ko01000,ko03009 RNA methyltransferase, RsmD family
GDBFNOLI_01318 9.94e-71 ylbG - - S - - - Uncharacterized protein conserved in bacteria (DUF2129)
GDBFNOLI_01319 3.91e-268 ftsW - - D ko:K03588 ko04112,map04112 ko00000,ko00001,ko02000,ko03036 Belongs to the SEDS family
GDBFNOLI_01320 0.0 typA - - T ko:K06207 - ko00000 GTP-binding protein TypA
GDBFNOLI_01321 2.79e-131 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GDBFNOLI_01322 5.22e-45 ykzG - - S - - - Belongs to the UPF0356 family
GDBFNOLI_01323 0.0 rnjA - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GDBFNOLI_01324 1.75e-211 ytlR - - I - - - Diacylglycerol kinase catalytic domain
GDBFNOLI_01325 0.0 - - - L - - - Nuclease-related domain
GDBFNOLI_01326 0.0 recD2 3.1.11.5 - L ko:K03581 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
GDBFNOLI_01327 2.31e-148 - - - S - - - repeat protein
GDBFNOLI_01328 4.7e-163 pgm - - G - - - Phosphoglycerate mutase family
GDBFNOLI_01329 4.47e-278 mnmA 2.8.1.13 - J ko:K00566 ko04122,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
GDBFNOLI_01330 9.98e-75 XK27_04120 - - S - - - Putative amino acid metabolism
GDBFNOLI_01331 1.62e-276 iscS 2.8.1.7 - E ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Aminotransferase class V
GDBFNOLI_01332 2.05e-163 mtnN 3.2.2.9 - E ko:K01243 ko00270,ko01100,ko01230,map00270,map01100,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GDBFNOLI_01333 1.22e-55 - - - - - - - -
GDBFNOLI_01334 5.18e-134 nudF 3.6.1.13 - L ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 ADP-ribose pyrophosphatase
GDBFNOLI_01335 2.32e-43 cspA - - K ko:K03704 - ko00000,ko03000 'Cold-shock' DNA-binding domain
GDBFNOLI_01336 0.0 ileS 6.1.1.5 - J ko:K01870 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
GDBFNOLI_01337 6.3e-138 divIVA - - D ko:K04074 - ko00000,ko03036 DivIVA domain protein
GDBFNOLI_01338 4.01e-192 ylmH - - S - - - S4 domain protein
GDBFNOLI_01339 2.42e-60 yggT - - S ko:K02221 - ko00000,ko02044 YGGT family
GDBFNOLI_01340 1.43e-96 sepF - - D ko:K09772 - ko00000,ko03036 Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
GDBFNOLI_01341 2.52e-300 ftsZ - - D ko:K03531 ko04112,map04112 ko00000,ko00001,ko02048,ko03036,ko04812 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
GDBFNOLI_01342 3.3e-315 ftsA - - D ko:K03590 ko04112,map04112 ko00000,ko00001,ko03036,ko04812 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
GDBFNOLI_01343 3.14e-194 divIB - - D ko:K03589 ko04112,map04112 ko00000,ko00001,ko03036 Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
GDBFNOLI_01344 3.88e-264 murG 2.4.1.227 GT28 M ko:K02563 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GDBFNOLI_01345 0.0 murD 6.3.2.9 - M ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
GDBFNOLI_01346 4.43e-224 mraY 2.7.8.13 - M ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GDBFNOLI_01347 0.0 pbpX - - M ko:K08724,ko:K12552,ko:K12556 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011 Penicillin-binding Protein
GDBFNOLI_01348 6.55e-72 ftsL - - D - - - Cell division protein FtsL
GDBFNOLI_01349 1.49e-223 rsmH 2.1.1.199 - J ko:K03438 - ko00000,ko01000,ko03009 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
GDBFNOLI_01350 5.63e-102 mraZ - - K ko:K03925 - ko00000 Belongs to the MraZ family
GDBFNOLI_01351 1.02e-72 - - - S - - - Protein of unknown function (DUF3397)
GDBFNOLI_01352 1.4e-09 - - - S - - - Protein of unknown function (DUF4044)
GDBFNOLI_01353 1.79e-74 - - - L - - - Resolvase, N-terminal
GDBFNOLI_01354 4.18e-208 - - - L ko:K07496 - ko00000 Putative transposase DNA-binding domain
GDBFNOLI_01355 1.86e-243 - - - L - - - Transposase and inactivated derivatives, IS30 family
GDBFNOLI_01358 5.43e-122 mreD - - - ko:K03571 - ko00000,ko03036 -
GDBFNOLI_01359 8.27e-189 mreC - - M ko:K03570 - ko00000,ko03036 Involved in formation and maintenance of cell shape
GDBFNOLI_01360 8.26e-226 mreB - - D ko:K03569 - ko00000,ko02048,ko03036,ko04812 cell shape determining protein MreB
GDBFNOLI_01361 6.18e-150 radC - - L ko:K03630 - ko00000 DNA repair protein
GDBFNOLI_01362 1.06e-162 - - - S - - - Haloacid dehalogenase-like hydrolase
GDBFNOLI_01363 1.22e-306 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the folylpolyglutamate synthase family
GDBFNOLI_01364 0.0 valS 6.1.1.9 - J ko:K01873 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
GDBFNOLI_01365 2.91e-67 - - - - - - - -
GDBFNOLI_01366 3.02e-166 - - - S ko:K06926 - ko00000 AAA domain, putative AbiEii toxin, Type IV TA system
GDBFNOLI_01367 0.0 yoaB 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
GDBFNOLI_01368 9.25e-13 - - - S - - - PD-(D/E)XK nuclease family transposase
GDBFNOLI_01369 8.53e-59 - - - - - - - -
GDBFNOLI_01370 3.33e-123 - - - S - - - Protein of unknown function (DUF3990)
GDBFNOLI_01371 4.08e-218 yfdH - GT2 M ko:K12999 - ko00000,ko01000,ko01003,ko01005 Glycosyltransferase, group 2 family protein
GDBFNOLI_01372 1.06e-86 - - - S - - - GtrA-like protein
GDBFNOLI_01373 3.97e-57 - - - S - - - PD-(D/E)XK nuclease family transposase
GDBFNOLI_01374 6.01e-153 rsuA 5.4.99.19 - J ko:K06183 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
GDBFNOLI_01375 2.1e-232 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
GDBFNOLI_01376 3.48e-288 thiI 2.8.1.4 - H ko:K03151 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko03016 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GDBFNOLI_01377 4.1e-271 iscS2 2.8.1.7 - E ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Aminotransferase class V
GDBFNOLI_01378 0.0 ezrA - - D ko:K06286 - ko00000,ko03036 modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
GDBFNOLI_01379 3.07e-142 rpsD - - J ko:K02986 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
GDBFNOLI_01380 8.08e-110 - - - S - - - Protein of unknown function (DUF1694)
GDBFNOLI_01381 6.97e-301 rarA - - L ko:K07478 - ko00000 recombination factor protein RarA
GDBFNOLI_01382 1.35e-56 - - - - - - - -
GDBFNOLI_01383 9.45e-104 uspA - - T - - - universal stress protein
GDBFNOLI_01384 1.18e-275 rodA - - D ko:K05837 - ko00000,ko03036 Belongs to the SEDS family
GDBFNOLI_01385 5.13e-46 - - - S - - - Protein of unknown function (DUF2969)
GDBFNOLI_01386 1.59e-68 ytjA - - S ko:K08998 - ko00000 Could be involved in insertion of integral membrane proteins into the membrane
GDBFNOLI_01387 4.81e-227 mbl - - D ko:K03569 - ko00000,ko02048,ko03036,ko04812 Cell shape determining protein MreB Mrl
GDBFNOLI_01388 2.54e-42 - - - S - - - Protein of unknown function (DUF1146)
GDBFNOLI_01389 2.45e-93 atpC - - C ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane
GDBFNOLI_01390 0.0 atpD 3.6.3.14 - C ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
GDBFNOLI_01391 1.04e-221 atpG - - C ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
GDBFNOLI_01392 0.0 atpA 3.6.3.14 - C ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
GDBFNOLI_01393 3.24e-120 atpH - - C ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GDBFNOLI_01394 2.57e-83 atpF - - C ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
GDBFNOLI_01395 4.83e-37 atpE - - C ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GDBFNOLI_01396 1.01e-166 atpB - - C ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko03110 it plays a direct role in the translocation of protons across the membrane
GDBFNOLI_01397 5.28e-146 upp 2.4.2.9 - F ko:K00761 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
GDBFNOLI_01398 1.36e-242 ywlC 2.7.7.87 - J ko:K07566 - ko00000,ko01000,ko03009,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
GDBFNOLI_01399 1.24e-198 prmC 2.1.1.297 - J ko:K02493 - ko00000,ko01000,ko03012 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
GDBFNOLI_01400 6.6e-237 prfA - - J ko:K02835 - ko00000,ko03012 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
GDBFNOLI_01401 9.98e-146 tdk 2.7.1.21 - F ko:K00857 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 thymidine kinase
GDBFNOLI_01402 0.0 murE2 6.3.2.13 - M ko:K01928 ko00300,ko00550,map00300,map00550 ko00000,ko00001,ko01000,ko01011 Domain of unknown function (DUF1727)
GDBFNOLI_01405 3.94e-250 ampC - - V - - - Beta-lactamase
GDBFNOLI_01406 4.63e-274 - - - EGP - - - Major Facilitator
GDBFNOLI_01407 0.0 pgi 5.3.1.9 - G ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GPI family
GDBFNOLI_01408 1.52e-136 vanZ - - V - - - VanZ like family
GDBFNOLI_01409 0.0 ltaS 2.7.8.20 - M ko:K19005 ko00561,ko01100,map00561,map01100 ko00000,ko00001,ko01000 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
GDBFNOLI_01410 0.0 yclK - - T - - - Histidine kinase
GDBFNOLI_01411 4.76e-165 - - - K - - - Transcriptional regulatory protein, C terminal
GDBFNOLI_01412 9.01e-90 - - - S - - - SdpI/YhfL protein family
GDBFNOLI_01413 1.93e-242 manA 5.3.1.8 - G ko:K01809 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 mannose-6-phosphate isomerase
GDBFNOLI_01414 1.72e-288 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I
GDBFNOLI_01415 3e-128 - - - M - - - Protein of unknown function (DUF3737)
GDBFNOLI_01417 1.07e-281 ackA 2.7.2.1 - F ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GDBFNOLI_01418 2.42e-238 ytxK 2.1.1.72 - L ko:K00571 - ko00000,ko01000,ko02048 N-6 DNA Methylase
GDBFNOLI_01419 3.69e-30 - - - - - - - -
GDBFNOLI_01420 1.94e-100 - - - U ko:K02248 - ko00000,ko00002,ko02044 Putative Competence protein ComGF
GDBFNOLI_01421 1.68e-55 - - - - - - - -
GDBFNOLI_01422 8.19e-91 - - - - ko:K02246 - ko00000,ko00002,ko02044 -
GDBFNOLI_01423 7.88e-63 comGC - - U ko:K02245 - ko00000,ko00002,ko02044 competence protein ComGC
GDBFNOLI_01424 5.76e-221 comGB - - NU ko:K02244 - ko00000,ko00002,ko02044 type II secretion system
GDBFNOLI_01425 5.04e-231 comGA - - NU ko:K02243 - ko00000,ko00002,ko02044 Type II IV secretion system protein
GDBFNOLI_01426 5.65e-171 yebC - - K - - - Transcriptional regulatory protein
GDBFNOLI_01427 2.33e-120 - - - S - - - VanZ like family
GDBFNOLI_01428 1.49e-130 ylbE - - GM - - - NAD(P)H-binding
GDBFNOLI_01429 3.96e-37 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GDBFNOLI_01432 4.26e-22 - - - L ko:K07467 - ko00000 Replication initiation factor
GDBFNOLI_01433 0.0 nrdE 1.17.4.1 - F ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GDBFNOLI_01434 5.23e-97 nrdI - - F ko:K03647 - ko00000 NrdI Flavodoxin like
GDBFNOLI_01435 1.48e-249 nrdF 1.17.4.1 - F ko:K00526 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GDBFNOLI_01436 1.07e-141 tnpR1 - - L - - - Resolvase, N terminal domain
GDBFNOLI_01437 6.91e-92 - - - L - - - IS1381, transposase OrfA
GDBFNOLI_01438 4.87e-96 tnpA1 - - L - - - PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
GDBFNOLI_01439 1.17e-38 - - - - - - - -
GDBFNOLI_01440 4.65e-184 - - - D - - - AAA domain
GDBFNOLI_01441 1.45e-212 repA - - S - - - Replication initiator protein A
GDBFNOLI_01442 1.14e-164 - - - S - - - Fic/DOC family
GDBFNOLI_01443 0.0 - - - E - - - Amino acid permease
GDBFNOLI_01445 1.14e-99 - - - M - - - 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
GDBFNOLI_01446 1.96e-110 - 2.7.7.65 - T ko:K02488 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko00002,ko01000,ko02022 GGDEF domain
GDBFNOLI_01447 2.64e-46 - - - - - - - -
GDBFNOLI_01448 1.67e-136 icaA - - M - - - Glycosyl transferase family group 2
GDBFNOLI_01449 2.21e-34 - 4.1.2.50, 4.2.3.12 - H ko:K01737 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000,ko03016 6-pyruvoyl tetrahydropterin synthase
GDBFNOLI_01450 4.11e-44 - - - T - - - Putative diguanylate phosphodiesterase
GDBFNOLI_01451 1.74e-60 - - - T - - - Putative diguanylate phosphodiesterase
GDBFNOLI_01452 5.12e-199 ybcH - - D ko:K06889 - ko00000 Alpha beta
GDBFNOLI_01453 0.0 - 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 1 family
GDBFNOLI_01454 0.0 pts33BCA - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system
GDBFNOLI_01455 8.39e-195 bglG5 - - K ko:K03488 - ko00000,ko03000 CAT RNA binding domain
GDBFNOLI_01456 2.52e-262 glxK 2.7.1.165 - G ko:K00865 ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130 ko00000,ko00001,ko01000 Belongs to the glycerate kinase type-1 family
GDBFNOLI_01457 3.07e-112 ptpA 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Belongs to the low molecular weight phosphotyrosine protein phosphatase family
GDBFNOLI_01458 2.85e-153 - - - - - - - -
GDBFNOLI_01459 3.23e-98 copY - - K ko:K02171 ko01501,map01501 ko00000,ko00001,ko00002,ko01504,ko03000 Penicillinase repressor
GDBFNOLI_01460 8.04e-190 - - - S - - - hydrolase
GDBFNOLI_01461 0.0 glmM 5.4.2.10 - G ko:K03431 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko01000 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GDBFNOLI_01462 2.76e-221 ybbR - - S - - - YbbR-like protein
GDBFNOLI_01463 2.13e-194 dacA 2.7.7.85 - S ko:K18672 - ko00000,ko01000 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
GDBFNOLI_01464 3.46e-266 potD - - P ko:K11069 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
GDBFNOLI_01465 3.8e-167 potC - - P ko:K11070 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
GDBFNOLI_01466 8.77e-173 potB - - P ko:K11071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
GDBFNOLI_01467 1.25e-263 potA 3.6.3.30, 3.6.3.31 - P ko:K02010,ko:K11072 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
GDBFNOLI_01468 2.84e-208 murB 1.3.1.98 - M ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation
GDBFNOLI_01469 1.51e-127 dnaQ 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
GDBFNOLI_01470 4.82e-113 ydiB - - O ko:K06925 - ko00000,ko03016 Hydrolase, P-loop family
GDBFNOLI_01471 1.1e-232 pta 2.3.1.8, 3.6.3.21 - C ko:K00625,ko:K02028 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000,ko02000 phosphate acetyltransferase
GDBFNOLI_01472 1.64e-174 ung 3.2.2.27 - L ko:K03648 ko03410,ko05340,map03410,map05340 ko00000,ko00001,ko01000,ko03400 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
GDBFNOLI_01473 2.81e-200 ycsE - - S - - - Sucrose-6F-phosphate phosphohydrolase
GDBFNOLI_01474 3.07e-124 - - - - - - - -
GDBFNOLI_01475 1.18e-253 - - - L - - - COG2826 Transposase and inactivated derivatives, IS30 family
GDBFNOLI_01476 5.46e-183 tpiA 5.3.1.1 - G ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
GDBFNOLI_01477 2.86e-286 pgk 2.7.2.3 - F ko:K00927 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the phosphoglycerate kinase family
GDBFNOLI_01478 2.86e-244 gap 1.2.1.12 - G ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
GDBFNOLI_01479 9.53e-241 cggR - - K ko:K05311 - ko00000,ko03000 Putative sugar-binding domain
GDBFNOLI_01481 0.0 - - - - - - - -
GDBFNOLI_01482 0.0 ycaM - - E - - - amino acid
GDBFNOLI_01483 1.43e-178 - - - S - - - Cysteine-rich secretory protein family
GDBFNOLI_01484 7.65e-101 - - - K - - - MerR HTH family regulatory protein
GDBFNOLI_01485 0.0 ycnB - - U - - - Belongs to the major facilitator superfamily
GDBFNOLI_01486 4.64e-63 - - - S - - - Domain of unknown function (DUF4811)
GDBFNOLI_01487 1.36e-167 ybbM - - S ko:K02069 - ko00000,ko00002,ko02000 Uncharacterised protein family (UPF0014)
GDBFNOLI_01488 3.16e-144 ybbL - - S ko:K02068 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
GDBFNOLI_01489 0.0 - - - S - - - SH3-like domain
GDBFNOLI_01490 1.16e-128 clpP 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GDBFNOLI_01491 8.59e-221 whiA - - K ko:K09762 - ko00000 May be required for sporulation
GDBFNOLI_01492 2.78e-251 yvcK - - S - - - Required for morphogenesis under gluconeogenic growth conditions
GDBFNOLI_01493 2.44e-211 yvcJ - - S ko:K06958 - ko00000,ko03019 Displays ATPase and GTPase activities
GDBFNOLI_01494 1.55e-117 - - - S - - - Short repeat of unknown function (DUF308)
GDBFNOLI_01495 0.0 uvrA - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
GDBFNOLI_01496 0.0 uvrB - - L ko:K03702 ko03420,map03420 ko00000,ko00001,ko03400 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
GDBFNOLI_01497 0.0 pgm 5.4.2.2 - G ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
GDBFNOLI_01498 3.42e-232 trxB 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
GDBFNOLI_01499 3.31e-239 gpsA 1.1.1.94 - I ko:K00057 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 Glycerol-3-phosphate dehydrogenase
GDBFNOLI_01500 4.04e-203 lgt - - M ko:K13292 - ko00000,ko01000 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
GDBFNOLI_01501 3.54e-230 hprK - - F ko:K06023 - ko00000,ko01000 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
GDBFNOLI_01502 8.33e-27 - - - - - - - -
GDBFNOLI_01503 2.24e-238 prfB - - J ko:K02836 - ko00000,ko03012 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
GDBFNOLI_01504 0.0 secA - - U ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
GDBFNOLI_01505 1.55e-122 hpf - - J ko:K05808 - ko00000,ko03009 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GDBFNOLI_01506 9.44e-169 comFC - - S ko:K02242 - ko00000,ko00002,ko02044 Competence protein
GDBFNOLI_01507 2.68e-314 comFA - - L ko:K02240 - ko00000,ko00002,ko02044 Helicase C-terminal domain protein
GDBFNOLI_01508 5.04e-154 yvyE 3.4.13.9 - S ko:K01271 - ko00000,ko01000,ko01002 YigZ family
GDBFNOLI_01509 1.94e-268 tagO 2.7.8.33, 2.7.8.35 - M ko:K02851 - ko00000,ko01000,ko01003,ko01005 transferase
GDBFNOLI_01510 3.03e-293 rny - - S ko:K18682 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Endoribonuclease that initiates mRNA decay
GDBFNOLI_01511 1.17e-248 recA - - L ko:K03553 ko03440,map03440 ko00000,ko00001,ko00002,ko03400 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GDBFNOLI_01512 3.92e-123 pgsA 2.7.8.5 - I ko:K00995 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GDBFNOLI_01513 1.63e-154 ymfM - - S ko:K15539 - ko00000 Helix-turn-helix domain
GDBFNOLI_01514 1.39e-171 fabG 1.1.1.100 - IQ ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Enoyl-(Acyl carrier protein) reductase
GDBFNOLI_01515 5.49e-301 ymfH - - S - - - Peptidase M16
GDBFNOLI_01516 1.47e-284 ymfF - - S - - - Peptidase M16 inactive domain protein
GDBFNOLI_01517 0.0 ftsK - - D ko:K03466 - ko00000,ko03036 Belongs to the FtsK SpoIIIE SftA family
GDBFNOLI_01518 3.12e-91 - - - S - - - Protein of unknown function (DUF1149)
GDBFNOLI_01519 2.12e-136 cspR 2.1.1.207 - J ko:K03216 - ko00000,ko01000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
GDBFNOLI_01520 2.19e-270 XK27_05220 - - S - - - AI-2E family transporter
GDBFNOLI_01521 1.99e-87 srlB 2.7.1.198 - G ko:K02781 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system glucitol/sorbitol-specific IIA component
GDBFNOLI_01522 1.01e-255 pgl 3.1.1.31 - G ko:K07404 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Lactonase, 7-bladed beta-propeller
GDBFNOLI_01523 3.77e-122 - - - S - - - SNARE associated Golgi protein
GDBFNOLI_01524 0.0 mycA 4.2.1.53 - S ko:K10254 - ko00000,ko01000 Myosin-crossreactive antigen
GDBFNOLI_01525 7.96e-221 rluD2 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
GDBFNOLI_01526 1.91e-195 nadK 2.7.1.23 - F ko:K00858 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GDBFNOLI_01527 1.7e-147 yjbM 2.7.6.5 - S ko:K07816 ko00230,map00230 ko00000,ko00001,ko01000 RelA SpoT domain protein
GDBFNOLI_01528 2.44e-143 - - - S - - - CYTH
GDBFNOLI_01529 5.74e-148 yjbH - - Q - - - Thioredoxin
GDBFNOLI_01530 2.63e-205 coiA - - S ko:K06198 - ko00000 Competence protein
GDBFNOLI_01531 1.5e-178 mecA - - NOT ko:K16511 - ko00000 Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
GDBFNOLI_01532 6.28e-87 spxA - - K ko:K16509 - ko00000 Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
GDBFNOLI_01533 0.0 ptsI 2.7.3.9 - G ko:K08483 ko02060,map02060 ko00000,ko00001,ko01000,ko02000 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GDBFNOLI_01534 1.29e-54 ptsH - - G ko:K11189 - ko00000,ko02000 phosphocarrier protein HPR
GDBFNOLI_01535 2.6e-37 - - - - - - - -
GDBFNOLI_01536 0.0 clpE - - O ko:K03697 - ko00000,ko03110 Belongs to the ClpA ClpB family
GDBFNOLI_01537 5.93e-60 XK27_09445 - - S - - - Domain of unknown function (DUF1827)
GDBFNOLI_01538 0.0 prfC - - J ko:K02837 - ko00000,ko03012 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
GDBFNOLI_01539 1.76e-181 hlyX - - S ko:K03699 - ko00000,ko02042 Transporter associated domain
GDBFNOLI_01540 7.76e-98 - - - - - - - -
GDBFNOLI_01541 1.74e-111 - - - - - - - -
GDBFNOLI_01542 2.79e-185 recX - - S ko:K03565 - ko00000,ko03400 Regulatory protein RecX
GDBFNOLI_01543 0.0 rumA_1 2.1.1.190, 2.1.1.35 - J ko:K00557,ko:K03215 - ko00000,ko01000,ko03009,ko03016 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GDBFNOLI_01544 1.94e-150 ybcH - - D ko:K06889 - ko00000 Alpha beta
GDBFNOLI_01545 1.04e-48 ybcH - - D ko:K06889 - ko00000 Alpha beta
GDBFNOLI_01546 7.74e-61 - - - - - - - -
GDBFNOLI_01547 4.42e-269 mvaS 2.3.3.10 - I ko:K01641 ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Hydroxymethylglutaryl-CoA synthase
GDBFNOLI_01548 1.22e-272 atoB 1.1.1.88, 2.3.1.9 - I ko:K00054,ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the thiolase family
GDBFNOLI_01549 3.22e-215 galU 2.7.7.9 - M ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 UTP-glucose-1-phosphate uridylyltransferase
GDBFNOLI_01550 3.44e-209 rbn - - S ko:K07058 - ko00000 Belongs to the UPF0761 family
GDBFNOLI_01551 9.98e-211 map 3.4.11.18 - E ko:K01265 - ko00000,ko01000,ko01002 Methionine Aminopeptidase
GDBFNOLI_01552 5.14e-105 ykuP - - C ko:K03839 - ko00000 Flavodoxin
GDBFNOLI_01553 7.46e-113 gtcA1 - - S - - - Teichoic acid glycosylation protein
GDBFNOLI_01554 1.62e-278 mnaA 5.1.3.14 - G ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 ko00000,ko00001,ko00002,ko01000,ko01005 Belongs to the UDP-N-acetylglucosamine 2-epimerase family
GDBFNOLI_01556 3.76e-316 chbC - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GDBFNOLI_01557 5.96e-283 yfmL - - L - - - DEAD DEAH box helicase
GDBFNOLI_01558 2.16e-79 lys - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
GDBFNOLI_01559 6.73e-78 lys - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
GDBFNOLI_01560 6.47e-32 - - - E ko:K03294 - ko00000 amino acid
GDBFNOLI_01561 1.84e-230 - - - E ko:K03294 - ko00000 amino acid
GDBFNOLI_01562 7.32e-157 - 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
GDBFNOLI_01563 6.74e-269 - 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
GDBFNOLI_01564 5.83e-67 - - - L - - - PFAM transposase, IS4 family protein
GDBFNOLI_01565 2.88e-113 - - - L - - - PFAM transposase, IS4 family protein
GDBFNOLI_01566 0.0 - 1.3.5.4 - C ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 ko00000,ko00001,ko00002,ko01000 FAD binding domain
GDBFNOLI_01567 8.59e-133 hpt 2.4.2.8 - F ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the purine pyrimidine phosphoribosyltransferase family
GDBFNOLI_01568 0.0 yhdP - - S - - - Transporter associated domain
GDBFNOLI_01569 2.14e-154 - - - C - - - nitroreductase
GDBFNOLI_01570 2.73e-50 - - - - - - - -
GDBFNOLI_01571 1.96e-113 ptbA 2.7.1.208 - G ko:K02755,ko:K02777,ko:K20107,ko:K20108 ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111 ko00000,ko00001,ko00002,ko01000,ko02000 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GDBFNOLI_01572 1.52e-103 - - - - - - - -
GDBFNOLI_01573 6.89e-190 glvR - - K ko:K03481 - ko00000,ko03000 Helix-turn-helix domain, rpiR family
GDBFNOLI_01574 0.0 glvC 2.7.1.208 - G ko:K02749,ko:K02750 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system, EIIB
GDBFNOLI_01575 7.44e-189 - - - S - - - hydrolase
GDBFNOLI_01576 1.85e-205 - - - S - - - Phospholipase, patatin family
GDBFNOLI_01577 0.0 xfp 4.1.2.22, 4.1.2.9 - G ko:K01621 ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120 ko00000,ko00001,ko01000 Phosphoketolase
GDBFNOLI_01578 3.76e-18 - - - K - - - Acetyltransferase (GNAT) domain
GDBFNOLI_01579 7.51e-16 - - - L - - - Transposase
GDBFNOLI_01580 1.01e-22 - - - L - - - Transposase
GDBFNOLI_01581 0.0 xfp 4.1.2.22, 4.1.2.9 - G ko:K01621 ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120 ko00000,ko00001,ko01000 Phosphoketolase
GDBFNOLI_01582 5.85e-86 nt5e 3.1.3.18 - L ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 ko00000,ko00001,ko01000 haloacid dehalogenase-like hydrolase
GDBFNOLI_01583 1.52e-157 araD 5.1.3.4 - G ko:K03077 ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120 ko00000,ko00001,ko00002,ko01000 links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
GDBFNOLI_01584 1.78e-163 sga 5.1.3.22 - G ko:K03079 ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Xylose isomerase-like TIM barrel
GDBFNOLI_01585 2.85e-115 ulaD 4.1.1.85, 4.1.2.43 - G ko:K03078,ko:K08093 ko00030,ko00040,ko00053,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00040,map00053,map00680,map01100,map01120,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Orotidine 5'-phosphate decarboxylase / HUMPS family
GDBFNOLI_01586 4.82e-42 ulaB 2.7.1.194 - G ko:K02822 ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
GDBFNOLI_01587 6.58e-293 sgaT - - S ko:K03475 ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko02000 PTS system sugar-specific permease component
GDBFNOLI_01588 4.93e-80 - 2.7.1.194 - G ko:K02821 ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GDBFNOLI_01589 6.33e-221 ulaG - - S ko:K03476 ko00053,ko01100,ko01120,map00053,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Beta-lactamase superfamily domain
GDBFNOLI_01590 1.59e-134 - - - K ko:K22103 - ko00000,ko03000 DeoR C terminal sensor domain
GDBFNOLI_01591 2.9e-79 - - - S - - - Enterocin A Immunity
GDBFNOLI_01592 3.18e-198 - 3.1.3.102, 3.1.3.104 - S ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 hydrolase
GDBFNOLI_01593 6.63e-174 gntR - - K - - - UbiC transcription regulator-associated domain protein
GDBFNOLI_01594 1.01e-222 rihC 3.2.2.1 - F ko:K01239,ko:K01250,ko:K12700 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 Nucleoside
GDBFNOLI_01595 0.0 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
GDBFNOLI_01596 1.82e-161 rpiA 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
GDBFNOLI_01597 8.52e-215 rbsK 2.7.1.15 - H ko:K00852 ko00030,map00030 ko00000,ko00001,ko01000 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GDBFNOLI_01598 7.29e-209 - - - C - - - Domain of unknown function (DUF4931)
GDBFNOLI_01599 2.2e-308 srrA1 - - G ko:K02027,ko:K17244 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDBFNOLI_01600 3.52e-296 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2325)
GDBFNOLI_01601 2.09e-110 - - - - - - - -
GDBFNOLI_01602 1.04e-211 - - - S - - - Protein of unknown function (DUF2974)
GDBFNOLI_01603 3.65e-141 glnP - - P ko:K10040 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
GDBFNOLI_01604 4.29e-122 glnM - - P ko:K10040 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
GDBFNOLI_01605 3.39e-187 glnH - - ET ko:K10039 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
GDBFNOLI_01606 2.8e-173 glnQ - - E ko:K10041 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
GDBFNOLI_01607 2.72e-60 udk 2.7.1.48 - F ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 Zeta toxin
GDBFNOLI_01608 5.43e-50 udk 2.7.1.48 - F ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko01000 Zeta toxin
GDBFNOLI_01609 8.41e-314 - - - G - - - MFS/sugar transport protein
GDBFNOLI_01610 1.72e-129 ykoE - - S ko:K16925 - ko00000,ko00002,ko02000 ABC-type cobalt transport system, permease component
GDBFNOLI_01611 0.0 XK27_09605 - - V ko:K18892 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter transmembrane region
GDBFNOLI_01612 0.0 XK27_09600 - - V ko:K06147,ko:K18891 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter, ATP-binding protein
GDBFNOLI_01613 2.53e-106 - - - K - - - Transcriptional regulator, MarR family
GDBFNOLI_01614 2.05e-188 peb1A - - ET ko:K10039 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
GDBFNOLI_01615 1.07e-165 - - - F - - - glutamine amidotransferase
GDBFNOLI_01616 3.41e-312 steT - - E ko:K03294 - ko00000 amino acid
GDBFNOLI_01617 3.97e-33 steT - - E ko:K03294 - ko00000 amino acid
GDBFNOLI_01618 1.11e-256 steT - - E ko:K03294 - ko00000 amino acid
GDBFNOLI_01619 1.53e-176 - - - - - - - -
GDBFNOLI_01620 6.07e-223 ydhF - - S - - - Aldo keto reductase
GDBFNOLI_01621 0.0 ykpA - - S - - - ABC transporter, ATP-binding protein
GDBFNOLI_01622 2.33e-230 pepA - - E - - - M42 glutamyl aminopeptidase
GDBFNOLI_01623 1.06e-195 pmrA - - EGP ko:K08161 - ko00000,ko02000 MFS_1 like family
GDBFNOLI_01624 0.0 qacA - - EGP - - - Major Facilitator
GDBFNOLI_01625 1.02e-115 pyrR 2.4.2.9 - F ko:K02825 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000,ko03000 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
GDBFNOLI_01626 3.34e-303 pyrP - - F ko:K02824 - ko00000,ko02000 Permease
GDBFNOLI_01627 3.55e-28 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative DNA-binding domain
GDBFNOLI_01628 8.97e-47 - - - - - - - -
GDBFNOLI_01629 1.64e-29 - 1.1.1.346 - S ko:K06221 - ko00000,ko01000 reductase
GDBFNOLI_01630 3.3e-128 - 1.1.1.346 - S ko:K06221 - ko00000,ko01000 reductase
GDBFNOLI_01631 6.13e-110 - - - K - - - Acetyltransferase (GNAT) domain
GDBFNOLI_01632 0.0 - 4.2.1.53 - S ko:K10254 - ko00000,ko01000 Myosin-crossreactive antigen
GDBFNOLI_01633 1.52e-119 - - - K - - - Bacterial regulatory proteins, tetR family
GDBFNOLI_01634 0.0 qacA - - EGP - - - Major Facilitator
GDBFNOLI_01639 1.42e-122 - - - K - - - Acetyltransferase (GNAT) domain
GDBFNOLI_01640 0.0 rumA_2 2.1.1.190 - J ko:K03215 - ko00000,ko01000,ko03009 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GDBFNOLI_01641 1.01e-256 flp - - V - - - Beta-lactamase
GDBFNOLI_01642 2.79e-309 nhaC - - C ko:K03315 - ko00000,ko02000 Na H antiporter NhaC
GDBFNOLI_01643 9.92e-187 - - - I - - - transferase activity, transferring acyl groups other than amino-acyl groups
GDBFNOLI_01644 1.46e-75 - - - - - - - -
GDBFNOLI_01645 2.61e-148 ybhL - - S ko:K06890 - ko00000 Belongs to the BI1 family
GDBFNOLI_01646 5.58e-219 dagK 2.7.1.107 - G ko:K07029 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko01000 Lipid kinase
GDBFNOLI_01647 0.0 gatB 6.3.5.6, 6.3.5.7 - J ko:K02434 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GDBFNOLI_01648 0.0 gatA 6.3.5.6, 6.3.5.7 - J ko:K02433 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
GDBFNOLI_01649 5.42e-67 gatC 6.3.5.6, 6.3.5.7 - J ko:K02435 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GDBFNOLI_01650 6.25e-268 camS - - S - - - sex pheromone
GDBFNOLI_01651 0.0 ligA 6.5.1.2 - L ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 ko00000,ko00001,ko01000,ko03032,ko03400 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
GDBFNOLI_01652 0.0 pcrA 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase
GDBFNOLI_01653 2.26e-118 acmA 3.2.1.17, 3.2.1.96 - NU ko:K01185,ko:K01227 ko00511,map00511 ko00000,ko00001,ko01000 mannosyl-glycoprotein
GDBFNOLI_01655 2.62e-109 ydcK - - S ko:K03095 - ko00000 Belongs to the SprT family
GDBFNOLI_01656 5.48e-173 - - - M - - - Glycosyltransferase sugar-binding region containing DXD motif
GDBFNOLI_01657 0.0 epsU - - S ko:K03328 - ko00000 Polysaccharide biosynthesis protein
GDBFNOLI_01658 9.16e-287 - - - M - - - CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
GDBFNOLI_01659 0.0 pacL 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
GDBFNOLI_01660 9.83e-261 tnpB - - L ko:K07496 - ko00000 Putative transposase DNA-binding domain
GDBFNOLI_01661 1.91e-195 nadE 6.3.1.5 - F ko:K01916 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
GDBFNOLI_01662 0.0 pncB 6.3.4.21 - F ko:K00763 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GDBFNOLI_01663 1.03e-261 - - - M - - - Glycosyl transferases group 1
GDBFNOLI_01664 3.02e-171 tagA 2.4.1.187 GT26 F ko:K05946 ko05111,map05111 ko00000,ko00001,ko01000,ko01003 Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
GDBFNOLI_01665 3.68e-93 tagD 2.7.7.39 - IM ko:K00980 ko00564,map00564 ko00000,ko00001,ko01000 Glycerol-3-phosphate cytidylyltransferase
GDBFNOLI_01666 1.87e-159 gntR1 - - K ko:K03710 - ko00000,ko03000 UTRA
GDBFNOLI_01667 2.17e-232 - - - - - - - -
GDBFNOLI_01668 1.15e-54 oppA2 - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
GDBFNOLI_01669 7.83e-303 oppA2 - - E ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
GDBFNOLI_01672 4.41e-305 npr 1.11.1.1 - C ko:K05910 - ko00000,ko01000 NADH oxidase
GDBFNOLI_01673 1.18e-13 - - - - - - - -
GDBFNOLI_01674 6.39e-32 - - - S - - - transposase or invertase
GDBFNOLI_01675 3.98e-210 slpX - - S - - - SLAP domain
GDBFNOLI_01676 1.76e-65 slpX - - S - - - SLAP domain
GDBFNOLI_01677 1.43e-186 - - - K - - - SIS domain
GDBFNOLI_01678 3.01e-154 rpiA1 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
GDBFNOLI_01679 1.03e-237 XK27_10475 - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
GDBFNOLI_01680 1.93e-266 araT 2.6.1.57 - E ko:K00832,ko:K00841 ko00270,ko00300,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase
GDBFNOLI_01682 0.0 mgtA 3.6.3.2 - P ko:K01531 - ko00000,ko01000 COG0474 Cation transport ATPase
GDBFNOLI_01684 2.67e-148 glpQ1 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 glycerophosphoryl diester phosphodiesterase
GDBFNOLI_01685 1.9e-153 - - - G - - - Antibiotic biosynthesis monooxygenase
GDBFNOLI_01686 9.01e-115 - - - G - - - Histidine phosphatase superfamily (branch 1)
GDBFNOLI_01687 8.92e-136 - - - G - - - Phosphoglycerate mutase family
GDBFNOLI_01688 5.68e-211 - - - D - - - nuclear chromosome segregation
GDBFNOLI_01689 1.33e-130 - - - M - - - LysM domain protein
GDBFNOLI_01690 2.57e-108 licC - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GDBFNOLI_01691 6.31e-99 licC - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GDBFNOLI_01692 1.83e-22 licC - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GDBFNOLI_01693 1.25e-17 - - - - - - - -
GDBFNOLI_01694 1.32e-218 pphA 3.1.3.16 - T ko:K07313 - ko00000,ko01000 Calcineurin-like phosphoesterase
GDBFNOLI_01695 1.04e-41 - - - - - - - -
GDBFNOLI_01697 3.65e-90 - - - S - - - Iron-sulphur cluster biosynthesis
GDBFNOLI_01698 1.08e-145 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Maltose acetyltransferase
GDBFNOLI_01699 3.31e-79 psiE - - S ko:K13256 - ko00000 Phosphate-starvation-inducible E
GDBFNOLI_01701 6.73e-169 nfrA 1.5.1.38 - C ko:K19285 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 nitroreductase
GDBFNOLI_01702 1.49e-290 amt - - P ko:K03320 - ko00000,ko02000 ammonium transporter
GDBFNOLI_01703 7.82e-80 - - - - - - - -
GDBFNOLI_01704 0.0 - - - L ko:K03724 - ko00000,ko01000,ko03400 DEAD DEAH box helicase
GDBFNOLI_01705 2.14e-312 - - - P - - - P-loop Domain of unknown function (DUF2791)
GDBFNOLI_01706 5.53e-173 - - - S - - - TerB-C domain
GDBFNOLI_01707 1.23e-242 - - - S - - - TerB-C domain
GDBFNOLI_01708 0.0 pckA 4.1.1.49 - H ko:K01610 ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Phosphoenolpyruvate carboxykinase
GDBFNOLI_01709 0.0 - - - V ko:K06147,ko:K06148 - ko00000,ko02000 ABC transporter transmembrane region
GDBFNOLI_01710 6.94e-202 - - - K - - - Helix-turn-helix XRE-family like proteins
GDBFNOLI_01711 9.05e-78 apfA 3.6.1.61 - F ko:K18445 ko00230,map00230 ko00000,ko00001,ko01000 Nudix hydrolase
GDBFNOLI_01712 3.36e-42 - - - - - - - -
GDBFNOLI_01713 1.78e-100 - 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Carboxymuconolactone decarboxylase family
GDBFNOLI_01714 5.26e-36 - 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Carboxymuconolactone decarboxylase family
GDBFNOLI_01715 2.7e-277 mtlD 1.1.1.17 - C ko:K00009 ko00051,map00051 ko00000,ko00001,ko01000 mannitol-1-phosphate 5-dehydrogenase activity
GDBFNOLI_01716 5.75e-103 mtlF 2.7.1.197 - G ko:K02798 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GDBFNOLI_01717 0.0 mtlA 2.7.1.197 - G ko:K02799,ko:K02800 ko00051,ko02060,map00051,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
GDBFNOLI_01718 0.0 mtlR - - K ko:K03483 - ko00000,ko03000 Mga helix-turn-helix domain
GDBFNOLI_01719 0.0 glmS 2.6.1.16 - M ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 ko00000,ko00001,ko01000,ko01002 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
GDBFNOLI_01720 0.0 adhE 1.1.1.1, 1.2.1.10 - C ko:K04072 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 belongs to the iron- containing alcohol dehydrogenase family
GDBFNOLI_01721 4.47e-58 adhE 1.1.1.1, 1.2.1.10 - C ko:K04072 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 belongs to the iron- containing alcohol dehydrogenase family
GDBFNOLI_01722 1.38e-309 cycA - - E ko:K03293,ko:K11737 - ko00000,ko02000 Amino acid permease
GDBFNOLI_01723 7.06e-111 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 transferase hexapeptide repeat
GDBFNOLI_01724 2.07e-203 - - - K - - - Transcriptional regulator
GDBFNOLI_01725 1.31e-81 - - - S - - - Domain of unknown function (DUF956)
GDBFNOLI_01726 3.51e-222 manN - - G ko:K02796 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 system, mannose fructose sorbose family IID component
GDBFNOLI_01727 9.65e-181 manY - - G ko:K02746,ko:K02795 ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system
GDBFNOLI_01728 2.72e-236 manL 2.7.1.191 - G ko:K02793,ko:K02794 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system sorbose subfamily IIB component
GDBFNOLI_01730 1.38e-165 - - - M - - - LPXTG-motif cell wall anchor domain protein
GDBFNOLI_01731 1.23e-183 - - - M - - - LPXTG-motif cell wall anchor domain protein
GDBFNOLI_01732 1.44e-53 - - - M - - - LPXTG-motif cell wall anchor domain protein
GDBFNOLI_01733 4.98e-37 - - - M - - - LPXTG-motif cell wall anchor domain protein
GDBFNOLI_01734 0.0 serS 6.1.1.11 - J ko:K01875 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
GDBFNOLI_01735 1.23e-129 yjcK 2.3.1.128 - J ko:K03790 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
GDBFNOLI_01736 3.2e-143 - - - S - - - SNARE associated Golgi protein
GDBFNOLI_01737 2.52e-194 - - - I - - - alpha/beta hydrolase fold
GDBFNOLI_01738 1.64e-201 plcR - - K ko:K20480 ko02024,map02024 ko00000,ko00001,ko03000 Helix-turn-helix
GDBFNOLI_01739 9.75e-20 - - - S ko:K07133 - ko00000 cog cog1373
GDBFNOLI_01740 1.41e-37 - - - S ko:K07133 - ko00000 cog cog1373
GDBFNOLI_01741 2.35e-117 - - - F - - - Nucleoside 2-deoxyribosyltransferase
GDBFNOLI_01742 0.0 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 - C ko:K00135 ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Belongs to the aldehyde dehydrogenase family
GDBFNOLI_01743 1.2e-220 - - - - - - - -
GDBFNOLI_01744 1.86e-31 - - - K - - - Acetyltransferase (GNAT) domain
GDBFNOLI_01746 0.0 ydgH - - S ko:K06994 - ko00000 MMPL family
GDBFNOLI_01747 1.53e-127 yobS - - K - - - Bacterial regulatory proteins, tetR family
GDBFNOLI_01748 1.89e-205 - 3.5.2.6 - V ko:K17836 ko00311,ko01130,ko01501,map00311,map01130,map01501 ko00000,ko00001,ko00002,ko01000,ko01504 Beta-lactamase enzyme family
GDBFNOLI_01749 1.4e-207 corA - - P ko:K03284 - ko00000,ko02000 CorA-like Mg2+ transporter protein
GDBFNOLI_01750 1.23e-309 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDBFNOLI_01751 0.0 - - - S - - - Zn-dependent metallo-hydrolase RNA specificity domain
GDBFNOLI_01752 3.25e-186 - - - P ko:K02026 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDBFNOLI_01753 1.64e-202 - - - P ko:K02025 - ko00000,ko00002,ko02000 ABC-type sugar transport systems, permease components
GDBFNOLI_01754 5.26e-259 malK - - P ko:K10112,ko:K17240 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ATPases associated with a variety of cellular activities
GDBFNOLI_01755 0.0 pepD1 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
GDBFNOLI_01756 7.24e-204 endA - - F ko:K15051 - ko00000 DNA RNA non-specific endonuclease
GDBFNOLI_01757 1.29e-230 - 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 EXOIII
GDBFNOLI_01758 5.11e-203 - - - K - - - NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
GDBFNOLI_01759 2.23e-150 yviA - - S - - - Protein of unknown function (DUF421)
GDBFNOLI_01760 2.94e-74 - - - S - - - Protein of unknown function (DUF3290)
GDBFNOLI_01761 7.8e-10 - - - S - - - Protein of unknown function (DUF3290)
GDBFNOLI_01762 3.85e-180 pnuC - - H ko:K03811 - ko00000,ko02000 nicotinamide mononucleotide transporter
GDBFNOLI_01764 3.62e-164 - - - S - - - PAS domain
GDBFNOLI_01765 0.0 - - - V - - - ABC transporter transmembrane region
GDBFNOLI_01766 1.28e-228 pepR 3.4.11.5 - E ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 Releases the N-terminal proline from various substrates
GDBFNOLI_01767 1.75e-168 - - - T - - - Transcriptional regulatory protein, C terminal
GDBFNOLI_01768 2.37e-242 - - - T - - - GHKL domain
GDBFNOLI_01769 2.88e-98 ykoJ - - S - - - Peptidase propeptide and YPEB domain
GDBFNOLI_01770 5.59e-109 - - - S - - - Peptidase propeptide and YPEB domain
GDBFNOLI_01771 8e-108 XK27_03150 2.3.1.57 - K ko:K22441 - ko00000,ko01000 Acetyltransferase (GNAT) domain
GDBFNOLI_01772 8.64e-85 yybA - - K - - - Transcriptional regulator
GDBFNOLI_01773 2.91e-83 - - - V ko:K06147 - ko00000,ko02000 ABC transporter transmembrane region
GDBFNOLI_01774 1.13e-201 - - - V ko:K06147 - ko00000,ko02000 ABC transporter transmembrane region
GDBFNOLI_01775 0.0 oppA - - E ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substratebinding protein
GDBFNOLI_01776 1.73e-79 - - - S ko:K08987 - ko00000 Protein of unknown function (DUF1304)
GDBFNOLI_01777 1.45e-36 - - - S - - - Peptidase propeptide and YPEB domain
GDBFNOLI_01778 2.15e-299 - - - L ko:K07496 - ko00000 transposase, IS605 OrfB family
GDBFNOLI_01779 1.24e-75 - - - S - - - Peptidase propeptide and YPEB domain
GDBFNOLI_01780 1.48e-134 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GDBFNOLI_01781 1.95e-218 coaA 2.7.1.33 - F ko:K00867 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Pantothenic acid kinase
GDBFNOLI_01782 1.88e-125 - - - E - - - GDSL-like Lipase/Acylhydrolase
GDBFNOLI_01783 1.36e-96 yjcF - - S - - - Acetyltransferase (GNAT) domain
GDBFNOLI_01784 7.09e-184 aatB - - ET ko:K02030 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein
GDBFNOLI_01785 6.89e-136 glnQ 3.6.3.21 - E ko:K02028 - ko00000,ko00002,ko01000,ko02000 ABC transporter
GDBFNOLI_01786 3e-139 yecS_2 - - P ko:K02029,ko:K02030 - ko00000,ko00002,ko02000 ABC transporter permease
GDBFNOLI_01787 0.0 helD 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
GDBFNOLI_01788 1.51e-150 XK27_08875 - - O - - - PFAM peptidase M10A and M12B, matrixin and adamalysin
GDBFNOLI_01789 7.53e-163 gpm2 - - G - - - Phosphoglycerate mutase family
GDBFNOLI_01790 1.87e-308 - - - S - - - response to antibiotic
GDBFNOLI_01791 1.34e-162 - - - - - - - -
GDBFNOLI_01792 0.0 pacL3 3.6.3.8 - P ko:K01537 - ko00000,ko01000 P-type ATPase
GDBFNOLI_01793 6.28e-87 - 2.7.1.191 - G ko:K02793 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system fructose IIA component
GDBFNOLI_01794 1.42e-57 - - - - - - - -
GDBFNOLI_01795 4.65e-14 - - - - - - - -
GDBFNOLI_01796 7.81e-238 ansA 3.5.1.1 - EJ ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 ko00000,ko00001,ko01000 L-asparaginase, type I
GDBFNOLI_01797 8.28e-176 - - - K ko:K03481 - ko00000,ko03000 Helix-turn-helix domain, rpiR family
GDBFNOLI_01798 0.0 malH 3.2.1.122 GH4 G ko:K01232 ko00500,map00500 ko00000,ko00001,ko01000 Family 4 glycosyl hydrolase C-terminal domain
GDBFNOLI_01799 7.97e-131 - - - - - - - -
GDBFNOLI_01801 5.34e-77 tnpR1 - - L - - - Resolvase, N terminal domain
GDBFNOLI_01802 4.1e-34 dnaQ 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
GDBFNOLI_01803 7.44e-129 - - - L - - - An automated process has identified a potential problem with this gene model
GDBFNOLI_01805 2.84e-151 cps3J - - M - - - Domain of unknown function (DUF4422)
GDBFNOLI_01806 2.91e-140 epsE2 - - M - - - Bacterial sugar transferase
GDBFNOLI_01807 2.22e-184 ywqE 3.1.3.48 - GM ko:K01104 - ko00000,ko01000 PHP domain protein
GDBFNOLI_01808 5.61e-160 ywqD - - D - - - Capsular exopolysaccharide family
GDBFNOLI_01809 5.52e-187 epsB - - M - - - biosynthesis protein
GDBFNOLI_01810 8.14e-241 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
GDBFNOLI_01812 1.11e-283 hflX - - S ko:K03665 - ko00000,ko03009 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GDBFNOLI_01813 1.26e-223 - - - S - - - Cysteine-rich secretory protein family
GDBFNOLI_01814 3.01e-54 - - - - - - - -
GDBFNOLI_01815 1.73e-167 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC/P60 family
GDBFNOLI_01816 1.28e-174 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC P60 family protein
GDBFNOLI_01817 1.47e-114 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC/P60 family
GDBFNOLI_01818 4.26e-115 gmk2 2.7.4.8 - F ko:K00942 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko00002,ko01000 Guanylate kinase homologues.
GDBFNOLI_01819 4.52e-56 - - - - - - - -
GDBFNOLI_01820 0.0 - - - S - - - O-antigen ligase like membrane protein
GDBFNOLI_01821 8.77e-144 - - - - - - - -
GDBFNOLI_01822 5.48e-283 tnpB - - L ko:K07496 - ko00000 Putative transposase DNA-binding domain
GDBFNOLI_01823 4.75e-101 nrdI - - F ko:K03647 - ko00000 NrdI Flavodoxin like
GDBFNOLI_01824 1.96e-226 nrdF 1.17.4.1 - F ko:K00526 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GDBFNOLI_01825 1.16e-101 - - - - - - - -
GDBFNOLI_01826 1.58e-143 - - - S - - - Peptidase_C39 like family
GDBFNOLI_01827 7.36e-109 - - - S - - - Threonine/Serine exporter, ThrE
GDBFNOLI_01828 7.35e-174 - - - S - - - Putative threonine/serine exporter
GDBFNOLI_01829 0.0 - - - S - - - ABC transporter
GDBFNOLI_01830 2.52e-76 - - - - - - - -
GDBFNOLI_01831 8.69e-93 rimL - - J ko:K03817 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
GDBFNOLI_01832 5.49e-46 - - - - - - - -
GDBFNOLI_01833 7.2e-40 - - - - - - - -
GDBFNOLI_01834 2.33e-143 - - - S ko:K07150 - ko00000 Protein of unknown function (DUF554)
GDBFNOLI_01835 5.74e-256 brpA - - K - - - Cell envelope-like function transcriptional attenuator common domain protein
GDBFNOLI_01836 0.0 pepF - - E ko:K08602 - ko00000,ko01000,ko01002 oligoendopeptidase F
GDBFNOLI_01837 7.27e-42 - - - - - - - -
GDBFNOLI_01838 1.47e-91 doc - - S ko:K07341 - ko00000,ko02048 Prophage maintenance system killer protein
GDBFNOLI_01841 4.61e-37 - - - S - - - Enterocin A Immunity
GDBFNOLI_01844 1.13e-35 - - - K ko:K07729 - ko00000,ko03000 Helix-turn-helix XRE-family like proteins
GDBFNOLI_01845 0.000868 - - - - - - - -
GDBFNOLI_01846 2.04e-277 metE 2.1.1.14 - E ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 methionine synthase, vitamin-B12 independent
GDBFNOLI_01847 6.6e-115 luxS 4.4.1.21 - H ko:K07173 ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111 ko00000,ko00001,ko00002,ko01000 Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
GDBFNOLI_01848 0.0 lctP - - C ko:K03303 - ko00000,ko02000 L-lactate permease
GDBFNOLI_01849 1.59e-172 znuB - - U ko:K02075,ko:K09816 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC 3 transport family
GDBFNOLI_01850 1.63e-152 adcC - - P ko:K02074,ko:K09817,ko:K11710 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
GDBFNOLI_01851 9.9e-209 - - - P ko:K02077 - ko00000,ko00002,ko02000 Belongs to the bacterial solute-binding protein 9 family
GDBFNOLI_01852 4.47e-56 - - - K ko:K21903 - ko00000,ko03000 helix_turn_helix, Arsenical Resistance Operon Repressor
GDBFNOLI_01853 0.0 fruA 2.7.1.202 - GT ko:K02768,ko:K02769,ko:K02770 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphotransferase System
GDBFNOLI_01854 2.18e-215 pfkB 2.7.1.56 - H ko:K00882 ko00051,map00051 ko00000,ko00001,ko01000 Belongs to the carbohydrate kinase PfkB family. LacC subfamily
GDBFNOLI_01855 3.14e-175 fruR - - K ko:K03436 - ko00000,ko03000 DeoR C terminal sensor domain
GDBFNOLI_01856 6.39e-279 natB - - CP ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
GDBFNOLI_01857 3.09e-212 natA - - S ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
GDBFNOLI_01858 3.41e-88 - - - - - - - -
GDBFNOLI_01859 2.52e-32 - - - - - - - -
GDBFNOLI_01860 6.32e-42 - - - K ko:K07727 - ko00000,ko03000 Transcriptional regulator
GDBFNOLI_01861 3e-92 - - - - - - - -
GDBFNOLI_01862 1.5e-27 - - - S - - - Enterocin A Immunity
GDBFNOLI_01864 1.23e-54 - - - V ko:K20345 ko02024,map02024 ko00000,ko00001,ko02000 HlyD family secretion protein
GDBFNOLI_01865 0.0 comA - - V ko:K06147,ko:K06148,ko:K12292,ko:K20344 ko02010,ko02020,ko02024,map02010,map02020,map02024 ko00000,ko00001,ko01000,ko02000 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
GDBFNOLI_01866 1.64e-101 - - - K ko:K07707 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko02022 LytTr DNA-binding domain
GDBFNOLI_01867 1.79e-99 - 2.7.13.3 - T ko:K07706 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 GHKL domain
GDBFNOLI_01868 0.0 comA - - V ko:K06147,ko:K06148,ko:K12292,ko:K20344 ko02010,ko02020,ko02024,map02010,map02020,map02024 ko00000,ko00001,ko01000,ko02000 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
GDBFNOLI_01869 1.99e-162 - - - K ko:K07707 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko02022 LytTr DNA-binding domain
GDBFNOLI_01870 2.3e-165 - 2.7.13.3 - T ko:K07706 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 GHKL domain
GDBFNOLI_01871 1.89e-23 - - - - - - - -
GDBFNOLI_01872 0.0 - - - S ko:K06921 - ko00000 Archaea bacterial proteins of unknown function
GDBFNOLI_01873 0.0 agl 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 31 family
GDBFNOLI_01874 0.0 glcD 1.1.3.15 - C ko:K00104 ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130 ko00000,ko00001,ko01000 FAD linked oxidases, C-terminal domain
GDBFNOLI_01875 4.48e-34 - - - - - - - -
GDBFNOLI_01876 1.07e-35 - - - - - - - -
GDBFNOLI_01877 1.95e-45 - - - - - - - -
GDBFNOLI_01878 6.94e-70 - - - S - - - Enterocin A Immunity
GDBFNOLI_01879 7.79e-186 racD 5.1.1.13 - M ko:K01779 ko00250,ko01054,map00250,map01054 ko00000,ko00001,ko01000 Belongs to the aspartate glutamate racemases family
GDBFNOLI_01880 0.0 murE 6.3.2.13, 6.3.2.7 - M ko:K01928,ko:K05362 ko00300,ko00550,ko01100,map00300,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GDBFNOLI_01881 9.28e-271 - - - T - - - His Kinase A (phosphoacceptor) domain
GDBFNOLI_01882 8.32e-157 vanR - - K - - - response regulator
GDBFNOLI_01884 0.0 ndvA - - V ko:K06147 - ko00000,ko02000 ABC transporter
GDBFNOLI_01885 1.68e-179 - - - V ko:K06147,ko:K06148 - ko00000,ko02000 ABC transporter, ATP-binding protein
GDBFNOLI_01886 1.22e-190 - - - V ko:K06147,ko:K06148 - ko00000,ko02000 ABC transporter, ATP-binding protein
GDBFNOLI_01887 3.93e-176 - - - S - - - Protein of unknown function (DUF1129)
GDBFNOLI_01888 6.88e-257 ychF - - J ko:K06942 - ko00000,ko03009 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
GDBFNOLI_01889 1.1e-59 yyzM - - S - - - Bacterial protein of unknown function (DUF951)
GDBFNOLI_01890 1.49e-197 spo0J - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
GDBFNOLI_01891 4.99e-178 soj - - D ko:K03496 - ko00000,ko03036,ko04812 Sporulation initiation inhibitor
GDBFNOLI_01892 1.18e-190 noc - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
GDBFNOLI_01893 3.66e-166 rsmG 2.1.1.170 - J ko:K03501 - ko00000,ko01000,ko03009,ko03036 Specifically methylates the N7 position of a guanine in 16S rRNA
GDBFNOLI_01894 2.99e-75 cvpA - - S - - - Colicin V production protein
GDBFNOLI_01896 5.24e-230 apbE 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
GDBFNOLI_01897 9.48e-194 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
GDBFNOLI_01898 2.58e-126 azr 1.5.1.36 - S ko:K22394 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 NADPH-dependent FMN reductase
GDBFNOLI_01899 3.41e-125 azo1 1.5.1.36, 1.7.1.6 - S ko:K03206,ko:K19784,ko:K22393 ko00740,ko01100,map00740,map01100 ko00000,ko00001,ko01000 NADPH-dependent FMN reductase
GDBFNOLI_01900 1.25e-143 - - - K - - - WHG domain
GDBFNOLI_01901 2.63e-50 - - - - - - - -
GDBFNOLI_01902 0.0 pepD4 - - E ko:K08659 - ko00000,ko01000,ko01002 Dipeptidase
GDBFNOLI_01903 2.12e-132 lolD - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
GDBFNOLI_01904 1.05e-233 yxeA - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
GDBFNOLI_01905 1.45e-119 - - - K - - - Bacterial regulatory proteins, tetR family
GDBFNOLI_01906 2.75e-143 - - - G - - - phosphoglycerate mutase
GDBFNOLI_01907 9.79e-181 - - - S ko:K06889 - ko00000 Alpha/beta hydrolase family
GDBFNOLI_01908 1.45e-183 XK27_08125 - - S ko:K09861 - ko00000 Belongs to the UPF0246 family
GDBFNOLI_01909 5.5e-155 - - - - - - - -
GDBFNOLI_01910 9.18e-202 - - - C - - - Domain of unknown function (DUF4931)
GDBFNOLI_01911 3.58e-251 - - - S - - - Putative peptidoglycan binding domain
GDBFNOLI_01912 2.61e-23 - - - - - - - -
GDBFNOLI_01913 3.15e-121 - - - S - - - membrane
GDBFNOLI_01914 5.3e-92 - - - K - - - LytTr DNA-binding domain
GDBFNOLI_01915 6.93e-34 - - - S - - - Sugar efflux transporter for intercellular exchange
GDBFNOLI_01916 0.0 dtpT - - U ko:K03305 - ko00000 amino acid peptide transporter
GDBFNOLI_01917 0.0 pepN 3.4.11.2 - E ko:K01256 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 aminopeptidase
GDBFNOLI_01918 2.2e-79 lysM - - M - - - LysM domain
GDBFNOLI_01919 7.62e-223 - - - - - - - -
GDBFNOLI_01920 6.74e-212 mdtG2 - - EGP ko:K08161 - ko00000,ko02000 Transporter, major facilitator family protein
GDBFNOLI_01921 1.27e-58 mdtG2 - - EGP ko:K08161 - ko00000,ko02000 Transporter, major facilitator family protein
GDBFNOLI_01922 1.86e-114 ymdB - - S - - - Macro domain protein
GDBFNOLI_01924 1.19e-105 B4168_4126 - - L ko:K07493 - ko00000 Transposase
GDBFNOLI_01928 4.73e-84 - - - K - - - Helix-turn-helix XRE-family like proteins
GDBFNOLI_01929 1.39e-197 malG - - P ko:K15772 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter permease
GDBFNOLI_01930 0.0 malF - - P ko:K15771 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDBFNOLI_01931 2.73e-282 - - - G ko:K15770 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding protein
GDBFNOLI_01932 2.85e-266 msmX - - P ko:K10112 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
GDBFNOLI_01933 7.7e-149 pgmB 5.4.2.6 - S ko:K01838 ko00500,map00500 ko00000,ko00001,ko01000 beta-phosphoglucomutase
GDBFNOLI_01934 0.0 mapA 2.4.1.8 GH65 G ko:K00691 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 hydrolase, family 65, central catalytic
GDBFNOLI_01935 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G ko:K01208 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 13 family
GDBFNOLI_01936 0.0 malA1 3.2.1.10, 3.2.1.20 GH13,GH31 G ko:K01182,ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha amylase, catalytic domain
GDBFNOLI_01937 0.0 - - - M - - - Rib/alpha-like repeat
GDBFNOLI_01938 6.36e-230 yvdE - - K - - - helix_turn _helix lactose operon repressor
GDBFNOLI_01939 4.24e-46 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
GDBFNOLI_01940 4.23e-46 - - - L - - - An automated process has identified a potential problem with this gene model
GDBFNOLI_01941 5.04e-125 - 3.1.3.48 - T ko:K01104 - ko00000,ko01000 Tyrosine phosphatase family
GDBFNOLI_01942 0.0 glpK 2.7.1.30 - F ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 ko00000,ko00001,ko01000,ko04147 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
GDBFNOLI_01943 7.09e-184 thiD 2.7.1.49, 2.7.4.7 - H ko:K00941 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Phosphomethylpyrimidine kinase
GDBFNOLI_01944 6.46e-244 - - - G - - - Transmembrane secretion effector
GDBFNOLI_01945 5.63e-171 - - - V - - - ABC transporter transmembrane region
GDBFNOLI_01946 3.65e-285 - - - L ko:K07496 - ko00000 transposase, IS605 OrfB family
GDBFNOLI_01947 1.83e-91 - - - V - - - ABC transporter transmembrane region
GDBFNOLI_01948 6.69e-84 - - - L - - - RelB antitoxin
GDBFNOLI_01949 1.51e-168 cobQ - - S ko:K07009 - ko00000 glutamine amidotransferase
GDBFNOLI_01950 8.6e-108 - - - M - - - NlpC/P60 family
GDBFNOLI_01953 4.96e-192 - - - - - - - -
GDBFNOLI_01954 1.03e-07 - - - - - - - -
GDBFNOLI_01955 5.51e-47 - - - - - - - -
GDBFNOLI_01956 4.73e-205 - - - EG - - - EamA-like transporter family
GDBFNOLI_01957 3.18e-209 - - - EG - - - EamA-like transporter family
GDBFNOLI_01958 3.75e-178 yicL - - EG - - - EamA-like transporter family
GDBFNOLI_01959 1.32e-137 - - - - - - - -
GDBFNOLI_01960 9.07e-143 - - - - - - - -
GDBFNOLI_01961 1.84e-238 - - - S - - - DUF218 domain
GDBFNOLI_01962 0.0 yheS_2 - - S ko:K18231,ko:K19349 ko02010,map02010 br01600,ko00000,ko00001,ko01504,ko02000 ATPases associated with a variety of cellular activities
GDBFNOLI_01963 6.77e-111 - - - - - - - -
GDBFNOLI_01964 1.09e-74 - - - - - - - -
GDBFNOLI_01965 7.26e-35 - - - S - - - Protein conserved in bacteria
GDBFNOLI_01966 2.27e-71 - - - S - - - protein encoded in hypervariable junctions of pilus gene clusters
GDBFNOLI_01967 1.01e-38 - - - S - - - HicA toxin of bacterial toxin-antitoxin,
GDBFNOLI_01968 7.13e-313 purB 4.3.2.2 - F ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
GDBFNOLI_01969 0.0 purA 6.3.4.4 - F ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
GDBFNOLI_01970 1.35e-238 guaC 1.7.1.7 - F ko:K00364 ko00230,map00230 ko00000,ko00001,ko01000 Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
GDBFNOLI_01973 1.84e-263 - 4.2.1.126 - S ko:K07106,ko:K09963 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Bacterial protein of unknown function (DUF871)
GDBFNOLI_01974 5.12e-242 asnA 6.3.1.1 - F ko:K01914 ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230 ko00000,ko00001,ko01000 aspartate--ammonia ligase
GDBFNOLI_01975 6.45e-291 - - - E - - - amino acid
GDBFNOLI_01976 6.65e-179 puuD - - S ko:K07010 - ko00000,ko01002 peptidase C26
GDBFNOLI_01978 1.95e-221 - - - V - - - HNH endonuclease
GDBFNOLI_01979 6.36e-173 - - - S - - - PFAM Archaeal ATPase
GDBFNOLI_01980 5.27e-314 yifK - - E ko:K03293 - ko00000 Amino acid permease
GDBFNOLI_01981 2.58e-310 aapA - - E ko:K03293,ko:K11737 - ko00000,ko02000 Amino acid permease
GDBFNOLI_01982 5.08e-149 sipS3 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
GDBFNOLI_01983 0.0 clpE - - O ko:K03697,ko:K04086 - ko00000,ko03110 AAA domain (Cdc48 subfamily)
GDBFNOLI_01984 7.86e-212 - - - S - - - Alpha/beta hydrolase of unknown function (DUF915)
GDBFNOLI_01985 3.09e-304 pts13C - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GDBFNOLI_01986 1.68e-161 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
GDBFNOLI_01987 0.0 ylbB - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
GDBFNOLI_01988 1.96e-49 - - - - - - - -
GDBFNOLI_01989 0.0 ytgP - - S ko:K03328 - ko00000 Polysaccharide biosynthesis protein
GDBFNOLI_01990 1.34e-183 lysA2 - - M ko:K07273 - ko00000 Glycosyl hydrolases family 25
GDBFNOLI_01991 2.5e-172 - - - S - - - Protein of unknown function (DUF975)
GDBFNOLI_01992 1.97e-227 pbpX2 - - V - - - Beta-lactamase
GDBFNOLI_01993 5.44e-315 dltD - - M ko:K03740 ko01503,ko02020,ko05150,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01504 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
GDBFNOLI_01994 4.98e-48 dltC 6.1.1.13 - J ko:K14188 ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01000,ko01504 Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GDBFNOLI_01995 2.95e-304 dltB - - M ko:K03739 ko01503,ko02020,ko05150,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01504 MBOAT, membrane-bound O-acyltransferase family
GDBFNOLI_01996 0.0 dltA 6.1.1.13 - H ko:K03367 ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150 ko00000,ko00001,ko00002,ko01000,ko01504 Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GDBFNOLI_01997 1.3e-26 - - - S - - - D-Ala-teichoic acid biosynthesis protein
GDBFNOLI_01998 1.42e-58 - - - - - - - -
GDBFNOLI_01999 5.11e-265 - - - S - - - Membrane
GDBFNOLI_02000 3.41e-107 ykuL - - S - - - (CBS) domain
GDBFNOLI_02001 0.0 cadA - - P - - - P-type ATPase
GDBFNOLI_02002 5.71e-263 napA - - P - - - Sodium/hydrogen exchanger family
GDBFNOLI_02003 2.49e-63 - - - D ko:K19159 - ko00000,ko02048 Antitoxin component of a toxin-antitoxin (TA) module
GDBFNOLI_02004 1.68e-55 yoeB - - S ko:K19158 - ko00000,ko01000,ko02048 YoeB-like toxin of bacterial type II toxin-antitoxin system
GDBFNOLI_02005 0.0 - - - V ko:K06148 - ko00000,ko02000 ABC transporter transmembrane region
GDBFNOLI_02006 1.91e-200 mutR - - K - - - Helix-turn-helix XRE-family like proteins
GDBFNOLI_02007 1.05e-67 - - - - - - - -
GDBFNOLI_02008 3.62e-202 - - - EGP - - - Major facilitator Superfamily
GDBFNOLI_02009 1.49e-141 ywdE - - K ko:K20375 ko02024,map02024 ko00000,ko00001,ko03000 Transcriptional regulator
GDBFNOLI_02010 3.43e-155 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
GDBFNOLI_02011 5.14e-248 - - - S - - - DUF218 domain
GDBFNOLI_02012 0.0 - - - V ko:K02003,ko:K02004 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
GDBFNOLI_02013 0.0 ppc 4.1.1.31 - H ko:K01595 ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
GDBFNOLI_02014 5.9e-130 - - - S - - - ECF transporter, substrate-specific component
GDBFNOLI_02015 1.97e-255 tcsA - - S ko:K02058,ko:K07335 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein PnrA-like
GDBFNOLI_02016 4.57e-232 tcsA - - S ko:K02058,ko:K07335 - ko00000,ko00002,ko02000 ABC transporter substrate-binding protein PnrA-like
GDBFNOLI_02017 0.0 mglA 3.6.3.17 - S ko:K02056,ko:K06400 - ko00000,ko00002,ko01000,ko02000 ABC transporter
GDBFNOLI_02018 8.8e-262 mglC - - S ko:K02057 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
GDBFNOLI_02019 2.1e-220 yufQ - - S ko:K02057 - ko00000,ko00002,ko02000 Belongs to the binding-protein-dependent transport system permease family
GDBFNOLI_02020 3.08e-205 - - - S - - - Aldo/keto reductase family
GDBFNOLI_02021 1.15e-173 nagB 3.5.99.6 - G ko:K02564 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GDBFNOLI_02022 9.85e-154 dak 2.7.1.76 - F ko:K10353 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000 deoxynucleoside kinase
GDBFNOLI_02023 1.06e-159 dgk2 2.7.1.76 - F ko:K10353 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000 deoxynucleoside kinase
GDBFNOLI_02024 6.64e-94 - - - - - - - -
GDBFNOLI_02025 2.56e-179 - - - S - - - haloacid dehalogenase-like hydrolase
GDBFNOLI_02026 9.69e-292 pbuG - - S ko:K06901 - ko00000,ko02000 permease
GDBFNOLI_02027 3.85e-97 - - - S ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
GDBFNOLI_02028 4.03e-75 - - - S ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
GDBFNOLI_02029 8.34e-116 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
GDBFNOLI_02030 1.06e-247 - - - S - - - Uncharacterised protein family (UPF0236)
GDBFNOLI_02031 1.89e-47 rpsR - - J ko:K02963 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
GDBFNOLI_02032 7.46e-108 ssb - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
GDBFNOLI_02033 1.93e-65 rpsF - - J ko:K02990 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Binds together with S18 to 16S ribosomal RNA
GDBFNOLI_02034 0.0 gyrA 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GDBFNOLI_02035 0.0 gyrB 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GDBFNOLI_02036 5.14e-268 recF - - L ko:K03629 ko03440,map03440 ko00000,ko00001,ko03400 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
GDBFNOLI_02037 1.13e-48 yaaA - - S ko:K14761 - ko00000,ko03009 S4 domain protein YaaA
GDBFNOLI_02038 1.05e-240 dnaN 2.7.7.7 - L ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
GDBFNOLI_02039 1.92e-315 dnaA - - L ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GDBFNOLI_02040 3.26e-23 rpmH - - J ko:K02914 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL34 family
GDBFNOLI_02041 1.87e-81 rnpA 3.1.26.5 - J ko:K03536 - ko00000,ko01000,ko03016 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
GDBFNOLI_02042 5.58e-191 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
GDBFNOLI_02043 0.0 mnmE - - S ko:K03650 - ko00000,ko01000,ko03016 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
GDBFNOLI_02044 0.0 gidA - - D ko:K03495 - ko00000,ko03016,ko03036 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
GDBFNOLI_02045 0.0 pox1 1.2.3.3 - EH ko:K00158 ko00620,ko01100,map00620,map01100 ko00000,ko00001,ko01000 Belongs to the TPP enzyme family
GDBFNOLI_02046 5.38e-39 - - - - - - - -
GDBFNOLI_02047 0.0 gnd 1.1.1.343, 1.1.1.44 - H ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
GDBFNOLI_02049 3.31e-154 - - - K - - - helix_turn_helix, mercury resistance
GDBFNOLI_02050 3.82e-294 pbuG - - S ko:K06901 - ko00000,ko02000 permease
GDBFNOLI_02051 3.69e-54 - - - L ko:K07473 - ko00000,ko02048 Addiction module antitoxin, RelB DinJ family
GDBFNOLI_02052 5.05e-11 - - - - - - - -
GDBFNOLI_02053 3.58e-61 - - - S ko:K07124 - ko00000 Enoyl-(Acyl carrier protein) reductase
GDBFNOLI_02055 3.89e-106 yneE - - K - - - Transcriptional regulator
GDBFNOLI_02056 2.24e-79 yneE - - K - - - Transcriptional regulator
GDBFNOLI_02057 4.28e-285 - - - S ko:K07133 - ko00000 cog cog1373
GDBFNOLI_02058 5.9e-185 - - - S - - - haloacid dehalogenase-like hydrolase
GDBFNOLI_02059 1.81e-292 pbuG - - S ko:K06901 - ko00000,ko02000 permease
GDBFNOLI_02060 7.23e-50 - - - S ko:K11621 ko02020,map02020 ko00000,ko00001 Putative adhesin
GDBFNOLI_02061 3.61e-212 - - - V - - - ABC transporter transmembrane region
GDBFNOLI_02062 1.26e-176 - - - - - - - -
GDBFNOLI_02066 2.23e-48 - - - - - - - -
GDBFNOLI_02067 5.94e-75 - - - S - - - Cupredoxin-like domain
GDBFNOLI_02068 3.27e-58 - - - S - - - Cupredoxin-like domain
GDBFNOLI_02069 0.0 copA 3.6.3.3, 3.6.3.5, 3.6.3.54 - P ko:K01534,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 P-type ATPase
GDBFNOLI_02070 6.63e-147 crp2 - - K ko:K10914,ko:K21562 ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111 ko00000,ko00001,ko03000 helix_turn_helix, cAMP Regulatory protein
GDBFNOLI_02071 3.14e-137 - - - - - - - -
GDBFNOLI_02072 1.83e-316 - - - EGP ko:K08368 - ko00000,ko02000 Sugar (and other) transporter
GDBFNOLI_02073 6.46e-27 - - - - - - - -
GDBFNOLI_02074 3.91e-269 - - - - - - - -
GDBFNOLI_02075 6.57e-175 - - - S - - - SLAP domain
GDBFNOLI_02076 1.14e-154 - - - S - - - SLAP domain
GDBFNOLI_02077 4.54e-135 - - - S - - - Bacteriocin helveticin-J
GDBFNOLI_02078 2.35e-58 - - - - - - - -
GDBFNOLI_02079 8.29e-76 - - - K - - - Helix-turn-helix XRE-family like proteins
GDBFNOLI_02080 1.98e-41 - - - E - - - Zn peptidase
GDBFNOLI_02081 0.0 eriC - - P ko:K03281 - ko00000 chloride
GDBFNOLI_02082 6.1e-186 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
GDBFNOLI_02083 2.55e-65 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
GDBFNOLI_02084 1.18e-95 - - - S ko:K01992 - ko00000,ko00002,ko02000 domain protein
GDBFNOLI_02086 6.4e-315 ade 3.5.4.2 - F ko:K01486 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000 Adenine deaminase C-terminal domain
GDBFNOLI_02087 1.11e-121 - - - P ko:K02055 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter
GDBFNOLI_02088 1.27e-311 mntH - - P ko:K03322 - ko00000,ko02000 H( )-stimulated, divalent metal cation uptake system
GDBFNOLI_02089 1.64e-59 yitW - - S - - - Iron-sulfur cluster assembly protein
GDBFNOLI_02090 0.0 sufB - - O ko:K07033,ko:K09014 - ko00000 assembly protein SufB
GDBFNOLI_02091 6.98e-78 nifU - - C ko:K04488 - ko00000 SUF system FeS assembly protein, NifU family
GDBFNOLI_02092 1.39e-224 sufS 2.8.1.7, 4.4.1.16 - E ko:K11717 ko00450,ko01100,map00450,map01100 ko00000,ko00001,ko01000 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
GDBFNOLI_02093 6.22e-232 sufD - - O ko:K07033,ko:K09015 - ko00000 FeS assembly protein SufD
GDBFNOLI_02094 4.43e-179 sufC - - O ko:K09013 - ko00000,ko02000 FeS assembly ATPase SufC
GDBFNOLI_02095 5.4e-185 - - - S ko:K07133 - ko00000 cog cog1373
GDBFNOLI_02097 3.69e-15 - - - S - - - VRR_NUC
GDBFNOLI_02104 5.59e-195 - - - KL - - - DNA methylase
GDBFNOLI_02107 9.54e-228 - - - S - - - Terminase-like family
GDBFNOLI_02108 5.21e-109 - - - S ko:K09961 - ko00000 Protein of unknown function (DUF1073)
GDBFNOLI_02109 3.33e-70 - - - S - - - Phage Mu protein F like protein
GDBFNOLI_02110 9.61e-28 - - - S - - - Lysin motif
GDBFNOLI_02111 5.34e-73 - - - S ko:K09960 - ko00000 Uncharacterized protein conserved in bacteria (DUF2213)
GDBFNOLI_02112 8.98e-25 - - - - - - - -
GDBFNOLI_02114 3.15e-35 - - - S - - - Protein of unknown function (DUF4054)
GDBFNOLI_02115 5.56e-22 - - - - - - - -
GDBFNOLI_02118 1.16e-167 - - - S - - - Protein of unknown function (DUF3383)
GDBFNOLI_02121 2.42e-232 - - - L - - - Phage tail tape measure protein TP901
GDBFNOLI_02122 1.08e-53 - - - M - - - LysM domain
GDBFNOLI_02123 9.82e-61 - - - - - - - -
GDBFNOLI_02124 1.63e-128 - - - - - - - -
GDBFNOLI_02125 4.73e-48 - - - - - - - -
GDBFNOLI_02126 1.55e-40 - - - - - - - -
GDBFNOLI_02127 2.9e-140 - - - S - - - Baseplate J-like protein
GDBFNOLI_02131 4.45e-42 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2188)
GDBFNOLI_02132 1.74e-119 - - - - - - - -
GDBFNOLI_02133 1.17e-237 - - - K - - - IrrE N-terminal-like domain
GDBFNOLI_02136 4.63e-250 - - - L - - - COG2826 Transposase and inactivated derivatives, IS30 family
GDBFNOLI_02138 1.89e-32 B4168_4126 - - L ko:K07493 - ko00000 Transposase
GDBFNOLI_02139 2.5e-136 fabK 1.3.1.9 - S ko:K02371 ko00061,ko01100,ko01212,map00061,map01100,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 Nitronate monooxygenase
GDBFNOLI_02140 8.45e-102 pct 2.8.3.1 - I ko:K01026 ko00620,ko00640,ko00643,ko01100,ko01120,map00620,map00640,map00643,map01100,map01120 ko00000,ko00001,ko01000 Coenzyme A transferase
GDBFNOLI_02141 4.12e-205 pct 2.8.3.1 - I ko:K01026 ko00620,ko00640,ko00643,ko01100,ko01120,map00620,map00640,map00643,map01100,map01120 ko00000,ko00001,ko01000 Coenzyme A transferase
GDBFNOLI_02142 5.38e-184 - - - K - - - LysR substrate binding domain
GDBFNOLI_02143 1.47e-70 coaD 2.7.7.3 - H ko:K00954 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
GDBFNOLI_02144 1.41e-97 - - - S - - - ECF transporter, substrate-specific component
GDBFNOLI_02145 3.28e-101 coaA 2.7.1.33 - F ko:K00867 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Pantothenic acid kinase
GDBFNOLI_02146 1.29e-41 - - - O - - - OsmC-like protein
GDBFNOLI_02148 1.33e-44 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter substrate-binding protein
GDBFNOLI_02149 1.48e-139 - - - EGP - - - Major Facilitator
GDBFNOLI_02150 9.16e-301 - - - L ko:K07496 - ko00000 transposase, IS605 OrfB family
GDBFNOLI_02151 7.84e-95 - - - EGP - - - Major Facilitator
GDBFNOLI_02152 2.58e-45 - - - - - - - -
GDBFNOLI_02154 3.3e-42 - - - - - - - -
GDBFNOLI_02155 3.98e-97 - - - M - - - LysM domain
GDBFNOLI_02156 2.52e-06 - - - D - - - Domain of Unknown Function (DUF1542)
GDBFNOLI_02157 0.0 - 3.6.3.6 - P ko:K01535 ko00190,map00190 ko00000,ko00001,ko01000 Cation transporter/ATPase, N-terminus
GDBFNOLI_02158 4.97e-45 - 3.6.3.2, 3.6.3.6, 3.6.3.8 - P ko:K01531,ko:K01535,ko:K01537,ko:K12952 ko00190,map00190 ko00000,ko00001,ko01000 cation transport ATPase
GDBFNOLI_02160 7.01e-76 - - - C - - - 2Fe-2S iron-sulfur cluster binding domain
GDBFNOLI_02161 1.53e-189 - 5.2.1.13 - Q ko:K09835 ko00906,ko01100,ko01110,map00906,map01100,map01110 ko00000,ko00001,ko00002,ko01000 HI0933-like protein
GDBFNOLI_02162 9.37e-65 - - - K - - - helix_turn_helix gluconate operon transcriptional repressor
GDBFNOLI_02163 5.43e-202 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
GDBFNOLI_02164 9.07e-51 - - - S - - - CRISPR-associated protein (Cas_Csn2)
GDBFNOLI_02165 4.67e-54 cas2 - - L ko:K09951 - ko00000,ko02048 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
GDBFNOLI_02166 1.44e-164 cas1 - - L ko:K15342 - ko00000,ko02048,ko03400 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
GDBFNOLI_02167 2.47e-104 cas9 - - L ko:K09952 - ko00000,ko01000,ko02048 CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
GDBFNOLI_02168 1.5e-93 cas9 - - L ko:K09952 - ko00000,ko01000,ko02048 CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
GDBFNOLI_02169 5.89e-179 B4168_4126 - - L ko:K07493 - ko00000 Transposase
GDBFNOLI_02170 4.63e-32 - - - - - - - -
GDBFNOLI_02171 6.72e-177 - - - EP - - - Plasmid replication protein
GDBFNOLI_02172 2.74e-100 - - - S - - - helix_turn_helix, Deoxyribose operon repressor
GDBFNOLI_02173 1.24e-38 - - - - - - - -
GDBFNOLI_02174 6.31e-27 - - - - - - - -
GDBFNOLI_02177 2.12e-27 - - - S - - - Phage uncharacterised protein (Phage_XkdX)
GDBFNOLI_02178 1.01e-54 - - - - - - - -
GDBFNOLI_02184 4.28e-42 galU 2.7.7.9 - M ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 UTP-glucose-1-phosphate uridylyltransferase
GDBFNOLI_02185 3.26e-57 galU 2.7.7.9 - M ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 UTP-glucose-1-phosphate uridylyltransferase
GDBFNOLI_02186 4.36e-93 - - - K ko:K03827 - ko00000,ko01000 Acetyltransferase (GNAT) domain
GDBFNOLI_02187 8.08e-298 mepA - - V ko:K18908 - ko00000,ko00002,ko01504,ko02000 MATE efflux family protein
GDBFNOLI_02188 3.96e-84 epsIIG 1.1.1.133 - S ko:K00067,ko:K07011 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Glycosyltransferase, group 2 family protein
GDBFNOLI_02189 1.45e-90 - - - M - - - Glycosyltransferase, group 1 family protein
GDBFNOLI_02190 3.64e-51 - - - M - - - Glycosyl transferase family 2
GDBFNOLI_02191 7.05e-146 potC3 - - E ko:K02053 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
GDBFNOLI_02192 4.48e-174 potA11 3.6.3.30 - P ko:K02010,ko:K02052 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
GDBFNOLI_02193 5.48e-48 - - - P ko:K02055 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter
GDBFNOLI_02194 3.05e-110 ribE 2.5.1.9 - H ko:K00793 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Riboflavin synthase
GDBFNOLI_02195 3.68e-176 ribD 1.1.1.193, 3.5.4.26 - H ko:K11752 ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024 ko00000,ko00001,ko00002,ko01000 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
GDBFNOLI_02197 6.11e-66 - - - S - - - Protein of unknown function (DUF3021)
GDBFNOLI_02198 4.4e-86 - - - K - - - LytTr DNA-binding domain
GDBFNOLI_02201 4.53e-11 - - - - - - - -
GDBFNOLI_02202 1.02e-75 - - - - - - - -
GDBFNOLI_02203 1.13e-69 - - - - - - - -
GDBFNOLI_02205 3.21e-07 - - - - - - - -
GDBFNOLI_02206 2.15e-127 - - - L - - - Helix-turn-helix domain
GDBFNOLI_02207 4.31e-204 - - - L ko:K07497 - ko00000 hmm pf00665
GDBFNOLI_02208 1.39e-205 cas9 - - L ko:K09952 - ko00000,ko01000,ko02048 CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
GDBFNOLI_02209 6.59e-296 - - - L - - - Transposase DDE domain
GDBFNOLI_02210 1.08e-229 - - - L - - - DDE superfamily endonuclease
GDBFNOLI_02211 2.14e-103 - - - - - - - -
GDBFNOLI_02212 0.0 - - - L - - - Transposase DDE domain
GDBFNOLI_02213 8.41e-42 adh2 1.1.1.1 - E ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 alcohol dehydrogenase
GDBFNOLI_02214 2.24e-71 ykoJ - - S - - - Peptidase propeptide and YPEB domain
GDBFNOLI_02215 4.39e-55 - - - L - - - Transposase, IS116 IS110 IS902 family
GDBFNOLI_02216 2.09e-105 ybhL - - S ko:K06890 - ko00000 Belongs to the BI1 family
GDBFNOLI_02217 1.45e-203 - - - M - - - Glycosyl hydrolases family 25
GDBFNOLI_02218 1.03e-141 - - - L - - - COG3547 Transposase and inactivated derivatives
GDBFNOLI_02219 1.84e-147 - - - S - - - Domain of unknown function (DUF389)
GDBFNOLI_02220 1.08e-161 - - - S ko:K07133 - ko00000 cog cog1373

eggNOG-mapper v2.1.12 (Database: eggNOG v5.0.2, Mar. 2021 release)