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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	KEGG_ko	KEGG_Pathway	BRITE	Description
AMKCACLK_00001	0.0	dnaA	-	-	L	ko:K02313	ko02020,ko04112,map02020,map04112	ko00000,ko00001,ko03032,ko03036	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
AMKCACLK_00002	4.3e-256	dnaN	2.7.7.7	-	L	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
AMKCACLK_00003	4.08e-47	yaaA	-	-	S	ko:K14761	-	ko00000,ko03009	S4 domain protein YaaA
AMKCACLK_00004	2.09e-267	recF	-	-	L	ko:K03629	ko03440,map03440	ko00000,ko00001,ko03400	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AMKCACLK_00005	0.0	gyrB	5.99.1.3	-	L	ko:K02470	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AMKCACLK_00006	0.0	gyrA	5.99.1.3	-	L	ko:K02469	-	ko00000,ko01000,ko03032,ko03400	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AMKCACLK_00007	1.93e-65	rpsF	-	-	J	ko:K02990	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Binds together with S18 to 16S ribosomal RNA
AMKCACLK_00008	7.17e-110	ssb	-	-	L	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	ko00000,ko00001,ko03029,ko03032,ko03400	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
AMKCACLK_00009	1.89e-47	rpsR	-	-	J	ko:K02963	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AMKCACLK_00010	3.31e-302	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_00012	1.05e-220	-	-	-	V	-	-	-	ABC transporter transmembrane region
AMKCACLK_00014	1.26e-59	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMKCACLK_00017	2.08e-144	-	-	-	S	-	-	-	SLAP domain
AMKCACLK_00018	0.0	yybT	-	-	T	-	-	-	signaling protein consisting of a modified GGDEF domain and a DHH domain
AMKCACLK_00019	7.8e-97	rplI	-	-	J	ko:K02939	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
AMKCACLK_00020	0.0	dnaB	3.6.4.12	-	L	ko:K02314	ko03030,ko04112,map03030,map04112	ko00000,ko00001,ko01000,ko03032	Participates in initiation and elongation during chromosome replication
AMKCACLK_00021	4.01e-209	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, phosphonate, periplasmic substrate-binding protein
AMKCACLK_00022	2.4e-223	degV1	-	-	S	-	-	-	DegV family
AMKCACLK_00023	2.99e-216	scrK	2.7.1.4	-	GK	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	ko00000,ko00001,ko01000	ROK family
AMKCACLK_00024	2.24e-203	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMKCACLK_00025	6.19e-68	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMKCACLK_00026	2.33e-161	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMKCACLK_00027	0.0	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMKCACLK_00028	1.9e-15	-	-	-	S	-	-	-	CsbD-like
AMKCACLK_00029	5.32e-35	-	-	-	S	-	-	-	Transglycosylase associated protein
AMKCACLK_00030	1.35e-303	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
AMKCACLK_00031	5.15e-154	-	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
AMKCACLK_00033	3.59e-17	-	-	-	S	-	-	-	Adenine-specific methyltransferase EcoRI
AMKCACLK_00034	2.28e-310	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_00035	3.02e-54	-	-	-	S	-	-	-	Adenine-specific methyltransferase EcoRI
AMKCACLK_00036	6.67e-99	-	-	-	S	-	-	-	Adenine-specific methyltransferase EcoRI
AMKCACLK_00037	1.04e-250	-	-	-	V	-	-	-	Protein of unknown function DUF262
AMKCACLK_00038	4.39e-52	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
AMKCACLK_00039	4.84e-34	-	-	-	K	-	-	-	Probable zinc-ribbon domain
AMKCACLK_00043	1.27e-21	-	-	-	-	-	-	-	-
AMKCACLK_00044	1.11e-81	-	-	-	D	-	-	-	COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
AMKCACLK_00046	8.95e-207	-	-	-	EP	-	-	-	Plasmid replication protein
AMKCACLK_00047	7.83e-38	-	-	-	-	-	-	-	-
AMKCACLK_00048	1.46e-267	-	-	-	L	-	-	-	Belongs to the 'phage' integrase family
AMKCACLK_00049	1.49e-312	-	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
AMKCACLK_00051	1.21e-40	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
AMKCACLK_00052	6.64e-146	ybbL	-	-	S	ko:K02068	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
AMKCACLK_00053	1.17e-168	ybbM	-	-	S	ko:K02069	-	ko00000,ko00002,ko02000	Uncharacterised protein family (UPF0014)
AMKCACLK_00054	7.72e-284	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_00055	1.26e-21	-	-	-	K	ko:K09705	-	ko00000	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AMKCACLK_00056	7.95e-160	-	-	-	K	ko:K09705	-	ko00000	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AMKCACLK_00057	1.9e-29	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AMKCACLK_00058	2.35e-133	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
AMKCACLK_00059	0.0	-	-	-	V	-	-	-	Restriction endonuclease
AMKCACLK_00060	1.99e-71	-	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
AMKCACLK_00061	6.3e-308	-	-	-	S	-	-	-	LPXTG cell wall anchor motif
AMKCACLK_00062	4.7e-191	-	-	-	S	-	-	-	Putative ABC-transporter type IV
AMKCACLK_00063	3.65e-128	-	-	-	S	-	-	-	Cob(I)alamin adenosyltransferase
AMKCACLK_00064	6.12e-112	-	-	-	S	ko:K16927	-	ko00000,ko00002,ko02000	ECF transporter, substrate-specific component
AMKCACLK_00065	4.63e-78	-	-	-	S	-	-	-	Domain of unknown function (DUF4430)
AMKCACLK_00066	0.0	rtpR	1.17.4.2	-	F	ko:K00527	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	ribonucleoside-triphosphate reductase activity
AMKCACLK_00067	1.71e-223	ydbI	-	-	K	-	-	-	AI-2E family transporter
AMKCACLK_00068	3.93e-134	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
AMKCACLK_00069	3.37e-22	-	-	-	-	-	-	-	-
AMKCACLK_00070	2.4e-68	-	-	-	-	-	-	-	-
AMKCACLK_00071	7.41e-177	XK27_08845	-	-	S	ko:K05833	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
AMKCACLK_00072	1.17e-168	XK27_08840	-	-	U	ko:K05832	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
AMKCACLK_00073	1.05e-226	ABC-SBP	-	-	S	ko:K01989	-	ko00000,ko00002,ko02000	ABC transporter
AMKCACLK_00074	1.4e-172	ysaA	3.1.3.5, 3.8.1.2	-	S	ko:K01560,ko:K07025,ko:K08723	ko00230,ko00240,ko00361,ko00625,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00760,map01100,map01110,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
AMKCACLK_00075	6.05e-19	-	-	-	S	-	-	-	Bacteriocin helveticin-J
AMKCACLK_00076	3.77e-269	-	-	-	S	-	-	-	SLAP domain
AMKCACLK_00077	8.57e-211	yvgN	-	-	C	-	-	-	Aldo keto reductase
AMKCACLK_00078	0.0	fusA1	-	-	J	-	-	-	elongation factor G
AMKCACLK_00079	1.29e-196	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	haloacid dehalogenase-like hydrolase
AMKCACLK_00080	0.0	nisT	-	-	V	ko:K06147,ko:K20485	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko02000	ABC transporter
AMKCACLK_00081	1.27e-46	-	-	-	-	-	-	-	-
AMKCACLK_00082	8.5e-287	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMKCACLK_00083	3.62e-73	-	-	-	-	-	-	-	-
AMKCACLK_00084	7.58e-244	ldhA	1.1.1.28	-	C	ko:K03778,ko:K18347	ko00620,ko01120,ko01502,ko02020,map00620,map01120,map01502,map02020	ko00000,ko00001,ko00002,ko01000,ko01504	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AMKCACLK_00085	6.82e-85	-	-	-	G	-	-	-	Phosphotransferase enzyme family
AMKCACLK_00086	3.94e-117	-	-	-	G	-	-	-	Phosphotransferase enzyme family
AMKCACLK_00087	1.25e-204	xth	3.1.11.2	-	L	ko:K01142	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	exodeoxyribonuclease III
AMKCACLK_00088	0.0	-	-	-	E	ko:K20265	ko02024,map02024	ko00000,ko00001,ko02000	amino acid
AMKCACLK_00089	0.0	-	-	-	L	-	-	-	Helicase C-terminal domain protein
AMKCACLK_00090	2.55e-246	pbpX1	-	-	V	-	-	-	Beta-lactamase
AMKCACLK_00091	4.19e-92	def2	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins
AMKCACLK_00092	4.85e-100	-	-	-	-	-	-	-	-
AMKCACLK_00093	2.06e-108	-	-	-	S	-	-	-	COG NOG38524 non supervised orthologous group
AMKCACLK_00095	4.85e-100	-	-	-	-	-	-	-	-
AMKCACLK_00098	2.06e-108	-	-	-	S	-	-	-	COG NOG38524 non supervised orthologous group
AMKCACLK_00100	1.44e-52	-	-	-	K	-	-	-	LysR substrate binding domain
AMKCACLK_00101	1.93e-128	-	-	-	K	-	-	-	LysR substrate binding domain
AMKCACLK_00102	2.2e-141	-	-	-	K	-	-	-	Transcriptional regulator, LysR family
AMKCACLK_00103	2.49e-47	-	-	-	S	-	-	-	Cytochrome b5
AMKCACLK_00104	4.4e-212	arbZ	-	-	I	-	-	-	Phosphate acyltransferases
AMKCACLK_00105	1.06e-207	-	-	-	M	-	-	-	Glycosyl transferase family 8
AMKCACLK_00106	1.4e-234	-	-	-	M	-	-	-	Glycosyl transferase family 8
AMKCACLK_00107	2.1e-184	arbx	-	-	M	-	-	-	Glycosyl transferase family 8
AMKCACLK_00108	3.75e-165	-	-	-	I	-	-	-	Acyl-transferase
AMKCACLK_00109	1.11e-250	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_00110	1.56e-258	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
AMKCACLK_00111	1.05e-282	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
AMKCACLK_00112	4.13e-24	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
AMKCACLK_00114	2.21e-46	-	-	-	-	-	-	-	-
AMKCACLK_00116	2.8e-169	yycF	-	-	K	ko:K07668	ko02020,map02020	ko00000,ko00001,ko00002,ko02022	response regulator
AMKCACLK_00117	0.0	vicK	2.7.13.3	-	T	ko:K07652	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
AMKCACLK_00118	8.07e-314	yycH	-	-	S	-	-	-	YycH protein
AMKCACLK_00119	1.18e-188	yycI	-	-	S	-	-	-	YycH protein
AMKCACLK_00120	2.14e-191	vicX	3.1.26.11	-	S	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	domain protein
AMKCACLK_00121	1.18e-274	htrA	3.4.21.107	-	O	ko:K04771	ko01503,ko02020,map01503,map02020	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	serine protease
AMKCACLK_00122	2.23e-117	rlmH	2.1.1.177	-	J	ko:K00783	-	ko00000,ko01000,ko03009	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
AMKCACLK_00123	3.99e-49	-	-	-	K	-	-	-	Helix-turn-helix domain
AMKCACLK_00124	2.42e-30	-	-	-	K	-	-	-	Helix-turn-helix domain
AMKCACLK_00126	4.09e-103	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
AMKCACLK_00127	3.18e-50	-	-	-	-	ko:K01992	-	ko00000,ko00002,ko02000	-
AMKCACLK_00128	5.1e-40	axe	-	-	K	ko:K21498	-	ko00000,ko02048	Helix-turn-helix XRE-family like proteins
AMKCACLK_00129	2.78e-222	pepI	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
AMKCACLK_00130	5.2e-125	-	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Cobalt transport protein
AMKCACLK_00131	5.55e-316	-	-	-	S	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
AMKCACLK_00132	1e-220	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
AMKCACLK_00133	1.8e-53	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
AMKCACLK_00134	6.33e-46	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
AMKCACLK_00135	1.13e-76	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
AMKCACLK_00136	3.24e-145	-	-	-	L	-	-	-	Helix-turn-helix domain
AMKCACLK_00137	1.92e-206	htpX	-	-	O	ko:K03799	-	ko00000,ko00002,ko01000,ko01002	Belongs to the peptidase M48B family
AMKCACLK_00138	1.43e-125	lemA	-	-	S	ko:K03744	-	ko00000	LemA family
AMKCACLK_00139	3.08e-245	ysdE	-	-	P	-	-	-	Citrate transporter
AMKCACLK_00140	1.8e-91	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
AMKCACLK_00141	1.49e-303	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
AMKCACLK_00142	1.38e-74	glpQ	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	Membrane domain of glycerophosphoryl diester phosphodiesterase
AMKCACLK_00143	9.69e-25	-	-	-	-	-	-	-	-
AMKCACLK_00144	4.7e-156	yfbR	-	-	S	ko:K07023	-	ko00000	HD containing hydrolase-like enzyme
AMKCACLK_00145	6.56e-205	-	-	-	L	-	-	-	HNH nucleases
AMKCACLK_00146	4.29e-175	glnQ	-	-	E	ko:K17076	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
AMKCACLK_00147	0.0	XK27_05795	-	-	P	ko:K17073,ko:K17074	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
AMKCACLK_00148	1.71e-156	yxlJ	3.2.2.21	-	L	ko:K03652	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Belongs to the DNA glycosylase MPG family
AMKCACLK_00149	3.72e-82	yeaO	-	-	S	-	-	-	Protein of unknown function, DUF488
AMKCACLK_00150	4.26e-160	terC	-	-	P	-	-	-	Integral membrane protein TerC family
AMKCACLK_00151	1.71e-119	adaB	2.1.1.63	-	L	ko:K00567,ko:K10778,ko:K13531	-	ko00000,ko01000,ko03000,ko03400	6-O-methylguanine DNA methyltransferase, DNA binding domain
AMKCACLK_00152	1.14e-166	cobB	-	-	K	ko:K12410	-	ko00000,ko01000	SIR2 family
AMKCACLK_00153	1.14e-111	-	-	-	-	-	-	-	-
AMKCACLK_00154	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AMKCACLK_00155	3.27e-228	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
AMKCACLK_00156	4.17e-187	rnhA	3.1.26.4	-	L	ko:K03469	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AMKCACLK_00157	2.84e-184	-	-	-	S	-	-	-	Protein of unknown function (DUF1002)
AMKCACLK_00158	3.74e-204	epsV	-	-	S	-	-	-	glycosyl transferase family 2
AMKCACLK_00159	1.07e-163	-	-	-	S	-	-	-	Alpha/beta hydrolase family
AMKCACLK_00160	5.93e-149	-	-	-	GM	-	-	-	NmrA-like family
AMKCACLK_00161	6.35e-73	-	-	-	-	-	-	-	-
AMKCACLK_00162	8.37e-232	prs2	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AMKCACLK_00163	1.89e-157	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
AMKCACLK_00164	4.16e-173	-	-	-	-	-	-	-	-
AMKCACLK_00165	0.0	glnPH2	-	-	P	ko:K02029,ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter permease
AMKCACLK_00166	3.68e-173	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
AMKCACLK_00167	2.69e-295	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
AMKCACLK_00168	7.25e-265	ddl	6.3.2.4	-	F	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Belongs to the D-alanine--D-alanine ligase family
AMKCACLK_00169	6.11e-152	-	-	-	-	-	-	-	-
AMKCACLK_00170	1.09e-254	yibE	-	-	S	-	-	-	overlaps another CDS with the same product name
AMKCACLK_00171	1.35e-167	yibF	-	-	S	-	-	-	overlaps another CDS with the same product name
AMKCACLK_00172	4.03e-200	-	-	-	I	-	-	-	alpha/beta hydrolase fold
AMKCACLK_00173	1.21e-40	-	-	-	-	-	-	-	-
AMKCACLK_00174	0.0	-	-	-	G	-	-	-	Belongs to the glycosyl hydrolase 31 family
AMKCACLK_00175	8.67e-111	ntd	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside
AMKCACLK_00176	2.55e-111	-	2.7.1.200, 2.7.1.204	-	G	ko:K02773,ko:K20112	ko00052,ko01100,ko02060,map00052,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AMKCACLK_00177	8.38e-190	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
AMKCACLK_00178	1.6e-113	usp5	-	-	T	-	-	-	universal stress protein
AMKCACLK_00180	4.2e-196	phnD	-	-	P	ko:K02044	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphonate ABC transporter
AMKCACLK_00181	2.12e-178	phnC	3.6.3.28	-	P	ko:K02041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
AMKCACLK_00182	3.54e-165	phnB	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
AMKCACLK_00183	4.13e-187	-	-	-	P	ko:K02042	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
AMKCACLK_00184	3.79e-141	tag	3.2.2.20	-	L	ko:K01246	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	glycosylase
AMKCACLK_00185	8.26e-106	-	-	-	-	-	-	-	-
AMKCACLK_00186	0.0	-	-	-	S	-	-	-	Calcineurin-like phosphoesterase
AMKCACLK_00187	0.0	asnB	6.3.5.4	-	E	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	ko00000,ko00001,ko01000,ko01002	Asparagine synthase
AMKCACLK_00188	0.0	yxbA	6.3.1.12	-	S	ko:K17810	-	ko00000,ko01000	ATP-grasp enzyme
AMKCACLK_00191	0.0	nrdD	1.1.98.6	-	F	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Ribonucleoside-triphosphate reductase
AMKCACLK_00192	1.35e-180	nrdG	1.97.1.4	-	O	ko:K04068	-	ko00000,ko01000	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AMKCACLK_00193	6.51e-128	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
AMKCACLK_00194	4.09e-292	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
AMKCACLK_00195	1.42e-287	yttB	-	-	EGP	-	-	-	Major Facilitator
AMKCACLK_00196	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
AMKCACLK_00197	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
AMKCACLK_00198	1.25e-114	-	-	-	-	-	-	-	-
AMKCACLK_00199	7.93e-19	-	-	-	-	-	-	-	-
AMKCACLK_00200	9.97e-40	-	-	-	-	-	-	-	-
AMKCACLK_00201	3.4e-48	-	-	-	S	-	-	-	Protein of unknown function (DUF2922)
AMKCACLK_00202	1.5e-241	-	-	-	S	-	-	-	SLAP domain
AMKCACLK_00204	9.59e-11	-	-	-	K	-	-	-	DNA-templated transcription, initiation
AMKCACLK_00205	1.89e-34	-	-	-	K	-	-	-	DNA-templated transcription, initiation
AMKCACLK_00206	1.05e-124	-	-	-	-	-	-	-	-
AMKCACLK_00207	1.12e-285	-	-	-	NU	-	-	-	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
AMKCACLK_00208	5.77e-268	-	3.2.1.96, 3.5.1.28	GH73	M	ko:K01227,ko:K01447,ko:K13714,ko:K13731	ko00511,ko05100,map00511,map05100	ko00000,ko00001,ko01000	N-acetylmuramoyl-L-alanine amidase
AMKCACLK_00209	0.0	yjbQ	-	-	P	ko:K03455,ko:K03499	-	ko00000,ko02000	TrkA C-terminal domain protein
AMKCACLK_00210	1.5e-32	-	-	-	K	-	-	-	Protein of unknown function (DUF4065)
AMKCACLK_00211	4.01e-119	-	-	-	K	-	-	-	Protein of unknown function (DUF4065)
AMKCACLK_00212	1.56e-228	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
AMKCACLK_00213	7.64e-62	-	-	-	-	-	-	-	-
AMKCACLK_00214	9.82e-287	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_00215	3.43e-68	-	-	-	-	-	-	-	-
AMKCACLK_00216	8.29e-173	-	-	-	-	-	-	-	-
AMKCACLK_00217	1.84e-170	gpmA	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AMKCACLK_00218	1.41e-141	pcp	3.4.19.3	-	O	ko:K01304	-	ko00000,ko01000,ko01002	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
AMKCACLK_00219	4.62e-131	-	-	-	G	-	-	-	Aldose 1-epimerase
AMKCACLK_00220	6.12e-257	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
AMKCACLK_00221	3.19e-145	plsY1	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
AMKCACLK_00222	0.0	XK27_08315	-	-	M	-	-	-	Sulfatase
AMKCACLK_00223	0.0	-	-	-	S	-	-	-	Fibronectin type III domain
AMKCACLK_00224	6.28e-310	tyrS	6.1.1.1	-	J	ko:K01866	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AMKCACLK_00225	1.85e-28	-	-	-	-	-	-	-	-
AMKCACLK_00227	0.0	pepC1	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
AMKCACLK_00228	4e-152	ypgQ	-	-	S	ko:K06950	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
AMKCACLK_00229	3.09e-267	guaB	1.1.1.205	-	F	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
AMKCACLK_00230	0.0	pepE	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	aminopeptidase
AMKCACLK_00231	1.75e-95	hsp	-	-	O	ko:K13993	ko04141,map04141	ko00000,ko00001,ko03110	Belongs to the small heat shock protein (HSP20) family
AMKCACLK_00232	1.57e-97	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
AMKCACLK_00233	6.33e-148	-	-	-	-	-	-	-	-
AMKCACLK_00235	2.55e-148	-	-	-	E	-	-	-	Belongs to the SOS response-associated peptidase family
AMKCACLK_00236	2.35e-244	trpS	6.1.1.2	-	J	ko:K01867	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
AMKCACLK_00237	6.34e-118	comEB	3.5.4.12	-	F	ko:K01493	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko02044	MafB19-like deaminase
AMKCACLK_00238	4.07e-141	-	-	-	S	ko:K06872	-	ko00000	TPM domain
AMKCACLK_00239	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
AMKCACLK_00240	0.0	metG	6.1.1.10	-	J	ko:K01874	ko00450,ko00970,map00450,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AMKCACLK_00241	3.86e-189	tatD	-	-	L	ko:K03424	-	ko00000,ko01000	hydrolase, TatD family
AMKCACLK_00242	2.1e-128	rnmV	3.1.26.8	-	J	ko:K05985	-	ko00000,ko01000	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
AMKCACLK_00243	6.96e-207	ksgA	2.1.1.182	-	J	ko:K02528	-	ko00000,ko01000,ko03009	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
AMKCACLK_00244	3.35e-51	veg	-	-	S	-	-	-	Biofilm formation stimulator VEG
AMKCACLK_00245	3.54e-191	purR	-	-	F	ko:K09685	-	ko00000,ko03000	pur operon repressor
AMKCACLK_00246	0.0	glmU	2.3.1.157, 2.7.7.23	-	M	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AMKCACLK_00247	1.91e-119	-	-	-	S	-	-	-	SLAP domain
AMKCACLK_00248	4.23e-208	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_00249	1.93e-187	-	-	-	-	-	-	-	-
AMKCACLK_00250	5.37e-283	-	-	-	S	-	-	-	SLAP domain
AMKCACLK_00251	6.3e-225	prs	2.7.6.1	-	F	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AMKCACLK_00252	5.82e-188	-	-	-	GK	-	-	-	ROK family
AMKCACLK_00253	5.78e-57	-	-	-	-	-	-	-	-
AMKCACLK_00254	0.0	-	-	-	S	ko:K06885	-	ko00000	Metal dependent phosphohydrolases with conserved 'HD' motif.
AMKCACLK_00255	6.77e-87	-	-	-	S	-	-	-	Domain of unknown function (DUF1934)
AMKCACLK_00256	5.46e-95	rpoE	-	-	K	ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko03021,ko03400	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
AMKCACLK_00257	0.0	pyrG	6.3.4.2	-	F	ko:K01937	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
AMKCACLK_00258	3.13e-311	murA	2.5.1.7	-	M	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AMKCACLK_00259	9.13e-43	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
AMKCACLK_00260	2.55e-64	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
AMKCACLK_00261	0.0	pepDA	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
AMKCACLK_00262	2.25e-202	msmR	-	-	K	-	-	-	AraC-like ligand binding domain
AMKCACLK_00263	4.3e-315	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_00264	5.72e-284	pbuX	-	-	F	ko:K03458,ko:K16169	-	ko00000,ko02000	xanthine permease
AMKCACLK_00265	2.34e-127	xpt	2.4.2.22	-	F	ko:K03816	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
AMKCACLK_00266	2.38e-143	-	-	-	K	-	-	-	DNA-binding helix-turn-helix protein
AMKCACLK_00267	3.27e-20	-	-	-	K	-	-	-	Helix-turn-helix
AMKCACLK_00268	0.0	guaA	6.3.5.2	-	F	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the synthesis of GMP from XMP
AMKCACLK_00269	6.5e-277	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_00270	9e-294	glyA	2.1.2.1	-	E	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AMKCACLK_00271	2.7e-278	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
AMKCACLK_00272	3.63e-288	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_00273	1.6e-30	-	-	-	L	-	-	-	Transposase
AMKCACLK_00274	1.93e-203	-	-	-	L	-	-	-	Transposase
AMKCACLK_00275	1.99e-205	-	-	-	-	-	-	-	-
AMKCACLK_00276	1.21e-260	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMKCACLK_00278	1.76e-94	-	-	-	L	-	-	-	IS1381, transposase OrfA
AMKCACLK_00279	2.27e-291	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMKCACLK_00280	2.37e-21	-	-	-	S	-	-	-	Bacteriocin helveticin-J
AMKCACLK_00281	5.05e-174	-	-	-	S	-	-	-	Bacteriocin helveticin-J
AMKCACLK_00282	9.13e-245	-	-	-	S	-	-	-	SLAP domain
AMKCACLK_00283	6.31e-267	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_00284	5.09e-200	yhaX	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
AMKCACLK_00285	6.18e-52	rpmE	-	-	J	ko:K02909	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L31
AMKCACLK_00286	0.0	murF	6.3.2.10	-	M	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
AMKCACLK_00287	0.0	cshA	3.6.4.13	-	F	ko:K05592	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
AMKCACLK_00288	6.61e-80	acpS	2.7.8.7	-	I	ko:K00997	ko00770,map00770	ko00000,ko00001,ko01000	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
AMKCACLK_00289	1.33e-275	alr	5.1.1.1, 5.1.1.5	-	E	ko:K01775,ko:K20707	ko00473,ko01100,ko01502,map00473,map01100,map01502	ko00000,ko00001,ko01000,ko01011	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AMKCACLK_00290	2.05e-120	-	-	-	K	-	-	-	transcriptional regulator
AMKCACLK_00291	2.39e-164	-	-	-	S	-	-	-	(CBS) domain
AMKCACLK_00292	3.42e-233	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
AMKCACLK_00293	1.55e-133	pth	3.1.1.29	-	J	ko:K01056	-	ko00000,ko01000,ko03012	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
AMKCACLK_00294	0.0	mfd	-	-	L	ko:K03723	ko03420,map03420	ko00000,ko00001,ko01000,ko03400	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AMKCACLK_00295	1.26e-46	yabO	-	-	J	-	-	-	S4 domain protein
AMKCACLK_00296	3.06e-77	divIC	-	-	D	ko:K13052	-	ko00000,ko03036	Septum formation initiator
AMKCACLK_00297	5.19e-78	-	-	-	J	ko:K07571	-	ko00000	S1 RNA binding domain
AMKCACLK_00298	1.46e-308	tilS	2.4.2.8, 6.3.4.19	-	J	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110	ko00000,ko00001,ko01000,ko03016	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
AMKCACLK_00299	0.0	ftsH	-	-	O	ko:K03798	-	ko00000,ko00002,ko01000,ko01002,ko03110	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AMKCACLK_00300	5.97e-209	hslO	-	-	O	ko:K04083	-	ko00000,ko03110	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
AMKCACLK_00301	4.78e-249	dus	-	-	J	ko:K05540	-	ko00000,ko01000,ko03016	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AMKCACLK_00302	0.0	lysS	6.1.1.6	-	J	ko:K04567	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family
AMKCACLK_00304	3.94e-37	-	-	-	-	-	-	-	-
AMKCACLK_00307	7.84e-106	ytsP	1.8.4.14	-	T	ko:K08968	ko00270,map00270	ko00000,ko00001,ko01000	GAF domain-containing protein
AMKCACLK_00308	0.0	clpC	-	-	O	ko:K03696	ko01100,map01100	ko00000,ko03110	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
AMKCACLK_00309	0.0	rpoB	2.7.7.6	-	K	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AMKCACLK_00310	0.0	rpoC	2.7.7.6	-	K	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AMKCACLK_00311	1.37e-80	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
AMKCACLK_00312	1.7e-194	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
AMKCACLK_00313	2.06e-157	comC	3.4.23.43	-	NOU	ko:K02236	-	ko00000,ko00002,ko01000,ko02044	Bacterial Peptidase A24 N-terminal domain
AMKCACLK_00314	7.28e-92	rpsL	-	-	J	ko:K02950	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
AMKCACLK_00315	8.05e-106	rpsG	-	-	J	ko:K02992	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
AMKCACLK_00316	0.0	fusA	-	-	J	ko:K02355	-	ko00000,ko03012,ko03029	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AMKCACLK_00317	3.53e-40	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
AMKCACLK_00318	1.14e-216	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
AMKCACLK_00319	6.34e-66	rpsJ	-	-	J	ko:K02946	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Involved in the binding of tRNA to the ribosomes
AMKCACLK_00320	3.84e-145	rplC	-	-	J	ko:K02906	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
AMKCACLK_00321	5.47e-137	rplD	-	-	J	ko:K02926	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the polypeptide exit tunnel
AMKCACLK_00322	4.67e-63	rplW	-	-	J	ko:K02892	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
AMKCACLK_00323	1.34e-196	rplB	-	-	J	ko:K02886	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
AMKCACLK_00324	1.24e-61	rpsS	-	-	J	ko:K02965	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AMKCACLK_00325	9.07e-73	rplV	-	-	J	ko:K02890	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
AMKCACLK_00326	1.75e-156	rpsC	-	-	J	ko:K02982	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
AMKCACLK_00327	1.66e-100	rplP	-	-	J	ko:K02878	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AMKCACLK_00328	1.45e-34	rpmC	-	-	J	ko:K02904	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uL29 family
AMKCACLK_00329	1.56e-55	rpsQ	-	-	J	ko:K02961	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
AMKCACLK_00330	2.1e-78	rplN	-	-	J	ko:K02874	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
AMKCACLK_00331	1.64e-43	rplX	-	-	J	ko:K02895	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
AMKCACLK_00332	7.13e-123	rplE	-	-	J	ko:K02931	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
AMKCACLK_00333	1e-39	rpsN	-	-	J	ko:K02954	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AMKCACLK_00334	2.28e-89	rpsH	-	-	J	ko:K02994	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
AMKCACLK_00335	5.05e-121	rplF	-	-	J	ko:K02933	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
AMKCACLK_00336	3.67e-73	rplR	-	-	J	ko:K02881	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
AMKCACLK_00337	2.63e-110	rpsE	-	-	J	ko:K02988	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
AMKCACLK_00338	2.22e-34	rpmD	-	-	J	ko:K02907	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L30
AMKCACLK_00339	1.73e-93	rplO	-	-	J	ko:K02876	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds to the 23S rRNA
AMKCACLK_00340	5.1e-301	secY	-	-	U	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
AMKCACLK_00341	2.61e-155	adk	2.7.4.3	-	F	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
AMKCACLK_00342	3.13e-46	infA	-	-	J	ko:K02518	-	ko00000,ko03012	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
AMKCACLK_00343	1.89e-21	rpmJ	-	-	J	ko:K02919	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL36 family
AMKCACLK_00344	1.46e-73	rpsM	-	-	J	ko:K02952	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
AMKCACLK_00345	3.82e-82	rpsK	-	-	J	ko:K02948	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AMKCACLK_00346	3.62e-218	rpoA	2.7.7.6	-	K	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AMKCACLK_00347	4.49e-80	rplQ	-	-	J	ko:K02879	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein L17
AMKCACLK_00348	1.38e-311	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_00349	2.69e-195	ecfA1	-	-	P	ko:K16786	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AMKCACLK_00350	3.56e-191	ecfA2	-	-	P	ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AMKCACLK_00351	5.22e-179	ecfT	-	-	U	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AMKCACLK_00352	6.08e-183	truA	5.4.99.12	-	J	ko:K06173	-	ko00000,ko01000,ko03016	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
AMKCACLK_00353	6.51e-103	rplM	-	-	J	ko:K02871	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AMKCACLK_00354	5.83e-87	rpsI	-	-	J	ko:K02996	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS9 family
AMKCACLK_00355	2.17e-61	yhaH	-	-	S	-	-	-	Protein of unknown function (DUF805)
AMKCACLK_00356	1.36e-136	-	3.5.1.124	-	S	ko:K03152	-	ko00000,ko01000,ko01002	DJ-1/PfpI family
AMKCACLK_00357	1.97e-85	-	3.8.1.2	-	S	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
AMKCACLK_00358	2.01e-18	-	3.8.1.2	-	S	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	ko00000,ko00001,ko01000	Haloacid dehalogenase-like hydrolase
AMKCACLK_00359	3.1e-105	-	-	-	S	ko:K07090	-	ko00000	membrane transporter protein
AMKCACLK_00360	4.24e-288	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMKCACLK_00361	1.9e-161	-	-	-	G	-	-	-	Belongs to the phosphoglycerate mutase family
AMKCACLK_00362	5.3e-209	-	-	-	P	ko:K16264	-	ko00000,ko02000	cation diffusion facilitator family transporter
AMKCACLK_00363	4.73e-31	-	-	-	-	-	-	-	-
AMKCACLK_00364	3.29e-162	gpmA1	5.4.2.11	-	G	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AMKCACLK_00365	3.29e-234	-	-	-	S	-	-	-	AAA domain
AMKCACLK_00366	2.86e-132	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_00367	2.21e-144	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_00368	0.0	mgtA	3.6.3.2	-	P	ko:K01531	-	ko00000,ko01000	COG0474 Cation transport ATPase
AMKCACLK_00369	6.47e-14	-	-	-	-	-	-	-	-
AMKCACLK_00370	4.42e-187	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
AMKCACLK_00371	0.0	pepC	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
AMKCACLK_00372	5.43e-187	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMKCACLK_00373	7.21e-181	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
AMKCACLK_00374	1.66e-176	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_00375	5.04e-71	-	-	-	-	-	-	-	-
AMKCACLK_00376	1.82e-131	dut	3.6.1.23	-	F	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	dUTP diphosphatase
AMKCACLK_00377	0.0	radA	-	-	O	ko:K04485	-	ko00000,ko03400	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
AMKCACLK_00378	0.0	gltX	6.1.1.24	-	J	ko:K09698	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AMKCACLK_00379	0.0	cysS	6.1.1.16	-	J	ko:K01883	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-I aminoacyl-tRNA synthetase family
AMKCACLK_00380	2.1e-99	mrnC	-	-	J	ko:K11145	-	ko00000,ko01000,ko03009	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
AMKCACLK_00381	1.76e-178	trmH	2.1.1.185	-	J	ko:K03218	-	ko00000,ko01000,ko03009	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AMKCACLK_00382	2.12e-120	comX	-	-	K	ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko03000,ko03021	Belongs to the sigma-70 factor family
AMKCACLK_00383	1.4e-44	-	-	-	-	-	-	-	-
AMKCACLK_00384	0.0	gntK	2.7.1.12	-	G	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko01000	Belongs to the FGGY kinase family
AMKCACLK_00385	0.0	dxs	2.2.1.7	-	H	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AMKCACLK_00386	1.21e-33	secE	-	-	U	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
AMKCACLK_00387	8.63e-131	nusG	-	-	K	ko:K02601	-	ko00000,ko03009,ko03021	Participates in transcription elongation, termination and antitermination
AMKCACLK_00388	3.82e-90	rplK	-	-	J	ko:K02867	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
AMKCACLK_00389	3.02e-160	rplA	-	-	J	ko:K02863	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
AMKCACLK_00390	2.6e-199	pstS	-	-	P	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	ko00000,ko00001,ko00002,ko02000	Phosphate
AMKCACLK_00391	4.05e-220	pstC	-	-	P	ko:K02037	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	probably responsible for the translocation of the substrate across the membrane
AMKCACLK_00392	9.02e-199	pstA	-	-	P	ko:K02038	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Phosphate transport system permease protein PstA
AMKCACLK_00393	2.49e-185	pstB2	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
AMKCACLK_00394	2.31e-179	pstB1	3.6.3.27	-	P	ko:K02036	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
AMKCACLK_00395	1.43e-151	phoU	-	-	P	ko:K02039	-	ko00000	Plays a role in the regulation of phosphate uptake
AMKCACLK_00396	3.34e-13	ywkB	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
AMKCACLK_00397	7.85e-197	ywkB	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
AMKCACLK_00398	2.51e-109	rplJ	-	-	J	ko:K02864	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
AMKCACLK_00399	2.67e-71	rplL	-	-	J	ko:K02935	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
AMKCACLK_00400	1.59e-44	-	2.1.1.172	-	J	ko:K00564,ko:K10716	-	ko00000,ko01000,ko02000,ko03009	Ion channel
AMKCACLK_00401	1.11e-64	-	2.1.1.172	-	J	ko:K00564,ko:K10716	-	ko00000,ko01000,ko02000,ko03009	Ion channel
AMKCACLK_00402	4.71e-149	rsmC	2.1.1.172	-	J	ko:K00564	-	ko00000,ko01000,ko03009	Methyltransferase
AMKCACLK_00403	9.21e-120	tadA	3.5.4.33	-	F	ko:K11991	-	ko00000,ko01000,ko03016	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
AMKCACLK_00404	0.0	dnaX	2.7.7.7	-	L	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AMKCACLK_00405	3.03e-65	yaaK	-	-	S	ko:K09747	-	ko00000	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
AMKCACLK_00406	5.33e-141	recR	-	-	L	ko:K06187	ko03440,map03440	ko00000,ko00001,ko03400	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
AMKCACLK_00407	5.61e-45	-	-	-	S	-	-	-	Protein of unknown function (DUF2508)
AMKCACLK_00408	2.41e-148	tmk	2.7.4.9	-	F	ko:K00943	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AMKCACLK_00409	3.6e-67	yaaQ	-	-	S	-	-	-	Cyclic-di-AMP receptor
AMKCACLK_00410	2.41e-198	holB	2.7.7.7	-	L	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
AMKCACLK_00411	1.35e-78	yabA	-	-	L	-	-	-	Involved in initiation control of chromosome replication
AMKCACLK_00412	4.5e-198	rsmI	2.1.1.198	-	H	ko:K07056	-	ko00000,ko01000,ko03009	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AMKCACLK_00413	4.01e-181	fat	3.1.2.21	-	I	ko:K01071	ko00061,ko01100,map00061,map01100	ko00000,ko00001,ko01000,ko01004	Acyl-ACP thioesterase
AMKCACLK_00414	6.4e-113	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
AMKCACLK_00415	6.36e-168	yeaZ	2.3.1.234	-	O	ko:K01409,ko:K14742	-	ko00000,ko01000,ko03016	Universal bacterial protein YeaZ
AMKCACLK_00416	1.6e-131	rimI	2.3.1.128	-	K	ko:K03789	-	ko00000,ko01000,ko03009	Ribosomal-protein-alanine acetyltransferase
AMKCACLK_00417	2.16e-249	tsaD	2.3.1.234	-	J	ko:K01409	-	ko00000,ko01000,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
AMKCACLK_00418	2.1e-306	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_00419	1.66e-158	deoC	4.1.2.4	-	F	ko:K01619	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
AMKCACLK_00420	3.42e-233	-	-	-	S	-	-	-	Oxidoreductase family, NAD-binding Rossmann fold
AMKCACLK_00421	9.39e-167	frlR1	-	-	K	ko:K03710,ko:K10711	-	ko00000,ko03000	UTRA
AMKCACLK_00422	3.87e-12	-	-	-	S	-	-	-	Toxin ToxN, type III toxin-antitoxin system
AMKCACLK_00423	1.35e-140	bbsF_1	2.8.3.19	-	C	ko:K18702	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
AMKCACLK_00424	1.97e-136	bbsF_1	2.8.3.19	-	C	ko:K18702	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
AMKCACLK_00425	2.16e-140	frc	2.8.3.16	-	C	ko:K07749	-	ko00000,ko01000	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
AMKCACLK_00426	3.89e-46	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
AMKCACLK_00427	5.37e-274	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
AMKCACLK_00428	2.43e-17	spxB	1.2.3.3, 1.2.5.1, 2.2.1.6, 4.1.1.8	-	EH	ko:K00156,ko:K00158,ko:K01577,ko:K01652	ko00290,ko00620,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00620,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the TPP enzyme family
AMKCACLK_00429	0.0	ydiF	-	-	S	ko:K06158	-	ko00000,ko03012	ABC transporter, ATP-binding protein
AMKCACLK_00430	3.4e-150	rex	-	-	K	ko:K01926	-	ko00000,ko03000	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
AMKCACLK_00431	4.34e-101	-	-	-	K	-	-	-	LytTr DNA-binding domain
AMKCACLK_00432	1.26e-161	-	-	-	S	-	-	-	membrane
AMKCACLK_00433	1.39e-230	scrR	-	-	K	ko:K02529,ko:K03484	-	ko00000,ko03000	Transcriptional regulator, LacI family
AMKCACLK_00434	2.3e-290	scrB	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
AMKCACLK_00435	0.0	scrA	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
AMKCACLK_00436	7.04e-63	-	-	-	-	-	-	-	-
AMKCACLK_00437	9.71e-116	-	-	-	-	-	-	-	-
AMKCACLK_00438	9.06e-60	groS	-	-	O	ko:K04078	-	ko00000,ko03029,ko03110	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AMKCACLK_00439	0.0	groL	-	-	O	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
AMKCACLK_00440	0.0	mutS	-	-	L	ko:K03555	ko03430,map03430	ko00000,ko00001,ko03400	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
AMKCACLK_00441	0.0	mutL	-	-	L	ko:K03572	ko03430,map03430	ko00000,ko00001,ko03400	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
AMKCACLK_00442	1.03e-132	ruvA	3.6.4.12	-	L	ko:K03550	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
AMKCACLK_00443	4.17e-237	ruvB	3.6.4.12	-	L	ko:K03551	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
AMKCACLK_00444	1.42e-76	yajC	-	-	U	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
AMKCACLK_00445	0.0	zwf	1.1.1.363, 1.1.1.49	-	G	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AMKCACLK_00446	9.26e-270	dinB	2.7.7.7	-	L	ko:K02346	-	ko00000,ko01000,ko03400	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AMKCACLK_00447	1.56e-231	nrnA	3.1.13.3, 3.1.3.7	-	S	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120	ko00000,ko00001,ko01000,ko03400	DHHA1 domain protein
AMKCACLK_00448	5.24e-312	cshB	3.6.4.13	-	JKL	ko:K05592,ko:K18692	ko03018,map03018	ko00000,ko00001,ko01000,ko03009,ko03019	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
AMKCACLK_00449	4.66e-83	-	-	-	-	-	-	-	-
AMKCACLK_00450	2.67e-111	-	-	-	-	-	-	-	-
AMKCACLK_00451	0.0	alaS	6.1.1.7	-	J	ko:K01872	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AMKCACLK_00452	5.32e-57	yrzL	-	-	S	-	-	-	Belongs to the UPF0297 family
AMKCACLK_00453	2.69e-95	yrrK	-	-	J	ko:K07447	-	ko00000,ko01000	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
AMKCACLK_00454	4.8e-66	yrzB	-	-	S	-	-	-	Belongs to the UPF0473 family
AMKCACLK_00455	0.0	mutS2	-	-	L	ko:K07456	ko03430,map03430	ko00000,ko00001,ko03400	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
AMKCACLK_00456	5.37e-72	trxA	-	-	O	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Belongs to the thioredoxin family
AMKCACLK_00457	3.3e-64	mscL	-	-	M	ko:K03282	-	ko00000,ko02000	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
AMKCACLK_00458	3.63e-91	yslB	-	-	S	-	-	-	Protein of unknown function (DUF2507)
AMKCACLK_00459	1.19e-189	murI	3.6.1.66, 5.1.1.3	-	M	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100	ko00000,ko00001,ko01000,ko01011	Provides the (R)-glutamate required for cell wall biosynthesis
AMKCACLK_00460	2.16e-148	rdgB	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AMKCACLK_00461	1.05e-191	ykuT	-	-	M	ko:K16052,ko:K22044	-	ko00000,ko02000	mechanosensitive ion channel
AMKCACLK_00462	3.11e-28	ytxG	-	-	S	-	-	-	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
AMKCACLK_00463	3.09e-69	-	-	-	-	-	-	-	-
AMKCACLK_00464	2.37e-274	pepQ	3.4.13.9	-	E	ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
AMKCACLK_00465	6.84e-229	ccpA	-	-	K	ko:K02529	-	ko00000,ko03000	catabolite control protein A
AMKCACLK_00466	0.0	-	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
AMKCACLK_00467	2.42e-74	-	-	-	-	-	-	-	-
AMKCACLK_00468	0.0	sasH	3.1.3.5, 3.1.3.6, 3.1.4.16, 3.6.1.45	-	F	ko:K01081,ko:K01119,ko:K07004,ko:K08693,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
AMKCACLK_00469	3.11e-128	yutD	-	-	S	-	-	-	Protein of unknown function (DUF1027)
AMKCACLK_00470	1.24e-187	nagD	3.1.3.41	-	G	ko:K01101	ko00627,ko01120,map00627,map01120	ko00000,ko00001,ko01000	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
AMKCACLK_00471	5.73e-117	-	-	-	S	-	-	-	Protein of unknown function (DUF1461)
AMKCACLK_00472	1.69e-150	dedA	-	-	S	ko:K03975	-	ko00000	SNARE-like domain protein
AMKCACLK_00473	2.62e-193	yumC	1.18.1.2, 1.19.1.1	-	C	ko:K21567	-	ko00000,ko01000	Ferredoxin--NADP reductase
AMKCACLK_00474	4.85e-100	-	-	-	-	-	-	-	-
AMKCACLK_00475	2.06e-108	-	-	-	S	-	-	-	COG NOG38524 non supervised orthologous group
AMKCACLK_00503	1.19e-279	-	2.4.1.337	GT4	M	ko:K19002	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyl transferase 4-like domain
AMKCACLK_00504	1.75e-254	cpoA	2.4.1.208	GT4	M	ko:K13677,ko:K13678	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000,ko01003	Glycosyltransferase, group 1 family protein
AMKCACLK_00505	4.59e-226	mprF	-	-	S	ko:K07027	-	ko00000,ko02000	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
AMKCACLK_00506	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
AMKCACLK_00507	1.3e-40	secG	-	-	U	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Preprotein translocase
AMKCACLK_00508	0.0	rnr	-	-	J	ko:K12573	ko03018,map03018	ko00000,ko00001,ko01000,ko03016,ko03019	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
AMKCACLK_00509	4.52e-101	smpB	-	-	J	ko:K03664	-	ko00000	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
AMKCACLK_00510	4.85e-100	-	-	-	-	-	-	-	-
AMKCACLK_00513	2.06e-108	-	-	-	S	-	-	-	COG NOG38524 non supervised orthologous group
AMKCACLK_00516	2.76e-214	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
AMKCACLK_00519	4.32e-279	metK	2.5.1.6	-	H	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
AMKCACLK_00520	0.0	mdr	-	-	EGP	-	-	-	Major Facilitator
AMKCACLK_00521	3.79e-189	hepT	2.5.1.30	-	H	ko:K00805	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Belongs to the FPP GGPP synthase family
AMKCACLK_00522	1.8e-153	yodM	3.6.1.27	-	I	ko:K19302	ko00550,map00550	ko00000,ko00001,ko01000,ko01011	Acid phosphatase homologues
AMKCACLK_00523	0.0	leuS	6.1.1.4	-	J	ko:K01869	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Belongs to the class-I aminoacyl-tRNA synthetase family
AMKCACLK_00524	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
AMKCACLK_00525	4.49e-233	dhaK	2.7.1.121	-	G	ko:K05878	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak1 domain
AMKCACLK_00526	1.89e-118	dhaL	2.7.1.121	-	S	ko:K05879	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Dak2
AMKCACLK_00527	3.47e-73	dhaM	2.7.1.121	-	S	ko:K05881	ko00561,map00561	ko00000,ko00001,ko01000,ko02000	PTS system fructose IIA component
AMKCACLK_00528	8.9e-66	-	-	-	-	-	-	-	-
AMKCACLK_00529	3.39e-269	prtB	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
AMKCACLK_00530	2.12e-110	prtB	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
AMKCACLK_00531	2.49e-87	prtB	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
AMKCACLK_00532	8.59e-85	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
AMKCACLK_00533	4.81e-21	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
AMKCACLK_00534	8.77e-42	-	-	-	M	-	-	-	LPXTG-motif cell wall anchor domain protein
AMKCACLK_00535	1.92e-28	-	-	-	-	-	-	-	-
AMKCACLK_00536	2.66e-48	-	-	-	CO	ko:K03671	ko04621,ko05418,map04621,map05418	ko00000,ko00001,ko03110	Thioredoxin
AMKCACLK_00537	2.51e-152	-	-	-	K	-	-	-	Rhodanese Homology Domain
AMKCACLK_00538	7.66e-222	trxB	1.8.1.9	-	C	ko:K00384	ko00450,map00450	ko00000,ko00001,ko01000	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
AMKCACLK_00539	1.2e-48	frnE	5.3.4.1	-	Q	ko:K01829	-	ko00000,ko01000	DSBA-like thioredoxin domain
AMKCACLK_00540	7.82e-48	frnE	5.3.4.1	-	Q	ko:K01829	-	ko00000,ko01000	DSBA-like thioredoxin domain
AMKCACLK_00541	6.32e-35	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
AMKCACLK_00542	2.58e-243	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMKCACLK_00543	1.73e-105	-	-	-	S	-	-	-	Putative transposase
AMKCACLK_00544	1.42e-74	-	-	-	S	-	-	-	Putative transposase
AMKCACLK_00545	1.82e-165	treR	-	-	K	ko:K03486	-	ko00000,ko03000	UTRA
AMKCACLK_00546	0.0	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
AMKCACLK_00547	0.0	treB	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
AMKCACLK_00548	9.72e-44	sstT	-	-	U	ko:K07862	-	ko00000,ko02000	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
AMKCACLK_00549	0.0	-	1.2.3.3	-	EH	ko:K00158	ko00620,ko01100,map00620,map01100	ko00000,ko00001,ko01000	Belongs to the TPP enzyme family
AMKCACLK_00550	1.77e-21	cinA	3.5.1.42	-	S	ko:K03742,ko:K03743	ko00760,map00760	ko00000,ko00001,ko01000	Competence-damaged protein
AMKCACLK_00551	5.55e-62	cinA	3.5.1.42	-	S	ko:K03742,ko:K03743	ko00760,map00760	ko00000,ko00001,ko01000	Competence-damaged protein
AMKCACLK_00552	0.0	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMKCACLK_00553	7.22e-264	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
AMKCACLK_00554	1.39e-189	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMKCACLK_00556	1.58e-195	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMKCACLK_00557	2.8e-15	-	2.7.7.73, 2.7.7.80	-	H	ko:K03148,ko:K21029	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000	ThiF family
AMKCACLK_00559	1.56e-258	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
AMKCACLK_00560	0.0	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMKCACLK_00561	1.3e-11	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
AMKCACLK_00562	1.77e-294	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
AMKCACLK_00563	8.85e-49	-	-	-	-	-	-	-	-
AMKCACLK_00564	1.75e-24	-	-	-	-	-	-	-	-
AMKCACLK_00565	4.14e-22	repA	-	-	S	-	-	-	Replication initiator protein A
AMKCACLK_00566	3.43e-113	repA	-	-	S	-	-	-	Replication initiator protein A
AMKCACLK_00567	1.36e-203	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMKCACLK_00568	2.2e-68	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMKCACLK_00569	2.96e-175	yxeH	-	-	S	-	-	-	hydrolase
AMKCACLK_00570	1.32e-48	-	-	-	S	-	-	-	Enterocin A Immunity
AMKCACLK_00571	4.68e-46	psd	4.1.1.65	-	I	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the phosphatidylserine decarboxylase family
AMKCACLK_00572	1.4e-216	psd	4.1.1.65	-	I	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the phosphatidylserine decarboxylase family
AMKCACLK_00573	7.41e-65	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain
AMKCACLK_00575	1.81e-310	dacA	3.4.16.4	-	M	ko:K07258	ko00550,ko01100,map00550,map01100	ko00000,ko00001,ko01000,ko01002,ko01011	Belongs to the peptidase S11 family
AMKCACLK_00576	3.03e-195	nnrD	4.2.1.136, 5.1.99.6	-	H	ko:K17758,ko:K17759	-	ko00000,ko01000	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AMKCACLK_00577	9.06e-159	-	-	-	M	-	-	-	ErfK YbiS YcfS YnhG
AMKCACLK_00578	1.55e-100	padR	-	-	K	-	-	-	Virulence activator alpha C-term
AMKCACLK_00579	2.62e-136	padC	-	-	Q	ko:K13727	-	ko00000,ko01000	Phenolic acid decarboxylase
AMKCACLK_00580	1.38e-98	-	-	-	S	-	-	-	PD-(D/E)XK nuclease family transposase
AMKCACLK_00582	0.0	argS	6.1.1.19	-	J	ko:K01887	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Arginyl-tRNA synthetase
AMKCACLK_00583	5.16e-218	fba	4.1.2.13, 4.1.2.29	-	G	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Fructose-1,6-bisphosphate aldolase, class II
AMKCACLK_00584	1.46e-118	-	-	-	L	-	-	-	NUDIX domain
AMKCACLK_00585	3.27e-53	-	-	-	-	-	-	-	-
AMKCACLK_00586	1.66e-42	-	-	-	-	-	-	-	-
AMKCACLK_00588	1.56e-231	-	-	-	S	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter
AMKCACLK_00589	1.74e-142	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
AMKCACLK_00590	1.13e-182	-	-	-	S	ko:K01992	-	ko00000,ko00002,ko02000	ABC-2 family transporter protein
AMKCACLK_00592	7.34e-289	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMKCACLK_00593	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
AMKCACLK_00594	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
AMKCACLK_00596	7.34e-22	XK27_01125	-	-	L	ko:K07484	-	ko00000	PFAM IS66 Orf2 family protein
AMKCACLK_00598	2.27e-05	-	-	-	S	-	-	-	Phage derived protein Gp49-like (DUF891)
AMKCACLK_00599	8.86e-62	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
AMKCACLK_00600	1.06e-57	-	-	-	-	-	-	-	-
AMKCACLK_00601	4.07e-72	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
AMKCACLK_00602	1.54e-54	-	-	-	L	-	-	-	Probable transposase
AMKCACLK_00603	3.01e-43	-	-	-	L	-	-	-	Probable transposase
AMKCACLK_00604	1.19e-92	-	-	-	L	-	-	-	IS1381, transposase OrfA
AMKCACLK_00605	6.3e-110	-	-	-	K	-	-	-	Domain of unknown function (DUF1836)
AMKCACLK_00606	1.3e-199	yitS	-	-	S	-	-	-	EDD domain protein, DegV family
AMKCACLK_00609	7.76e-193	citG	2.4.2.52	-	H	ko:K05966	ko02020,map02020	ko00000,ko00001,ko01000	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
AMKCACLK_00610	7.15e-73	-	-	-	-	-	-	-	-
AMKCACLK_00611	3.69e-180	glpF	-	-	U	ko:K02440	-	ko00000,ko02000	Belongs to the MIP aquaporin (TC 1.A.8) family
AMKCACLK_00612	4.1e-31	mgtC3	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
AMKCACLK_00613	5.11e-101	mgtC3	-	-	S	ko:K07507	-	ko00000,ko02000	MgtC family
AMKCACLK_00614	3.87e-12	-	-	-	C	-	-	-	FMN-dependent dehydrogenase
AMKCACLK_00615	3.51e-30	bglH	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	beta-glucosidase activity
AMKCACLK_00616	7.28e-209	rluA	5.4.99.23, 5.4.99.28, 5.4.99.29	-	J	ko:K06177,ko:K06180	-	ko00000,ko01000,ko03009,ko03016	Responsible for synthesis of pseudouridine from uracil
AMKCACLK_00617	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	ko:K12555	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein
AMKCACLK_00618	8.43e-73	yheA	-	-	S	-	-	-	Belongs to the UPF0342 family
AMKCACLK_00619	3.37e-291	yhaO	-	-	L	ko:K03547	-	ko00000,ko03400	Ser Thr phosphatase family protein
AMKCACLK_00620	0.0	yhaN	-	-	L	-	-	-	AAA domain
AMKCACLK_00621	1.16e-241	yhaM	-	-	S	ko:K03698	-	ko00000,ko01000,ko03019	Metal dependent phosphohydrolases with conserved 'HD' motif.
AMKCACLK_00622	9.45e-64	XK27_04775	-	-	S	ko:K09155	-	ko00000	PAS domain
AMKCACLK_00623	1.96e-311	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_00624	2.68e-198	prsA	5.2.1.8	-	M	ko:K07533	-	ko00000,ko01000,ko03110	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
AMKCACLK_00625	6.03e-57	-	-	-	-	-	-	-	-
AMKCACLK_00626	1.13e-102	hit	-	-	FG	ko:K02503	-	ko00000,ko04147	Scavenger mRNA decapping enzyme C-term binding
AMKCACLK_00627	4.54e-20	-	-	-	S	-	-	-	Plasmid maintenance system killer
AMKCACLK_00628	6.86e-72	-	-	-	K	ko:K21498	-	ko00000,ko02048	Helix-turn-helix XRE-family like proteins
AMKCACLK_00629	9.02e-175	ecsA	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
AMKCACLK_00630	1.26e-269	ecsB	-	-	U	ko:K01992	-	ko00000,ko00002,ko02000	ABC transporter
AMKCACLK_00631	7.82e-161	trmB	2.1.1.33	-	J	ko:K03439	-	ko00000,ko01000,ko03016	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
AMKCACLK_00632	1.64e-72	ytpP	-	-	CO	-	-	-	Thioredoxin
AMKCACLK_00633	3.06e-157	XK27_10290	-	-	J	ko:K06878	-	ko00000	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
AMKCACLK_00634	0.0	-	-	-	S	-	-	-	SLAP domain
AMKCACLK_00635	0.0	murC	6.3.2.8	-	M	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Belongs to the MurCDEF family
AMKCACLK_00636	2.04e-226	-	-	-	S	-	-	-	SLAP domain
AMKCACLK_00637	0.0	-	-	-	M	-	-	-	Peptidase family M1 domain
AMKCACLK_00638	6.24e-246	-	-	-	S	-	-	-	Bacteriocin helveticin-J
AMKCACLK_00639	1.74e-28	-	-	-	-	-	-	-	-
AMKCACLK_00640	1.87e-68	-	-	-	L	ko:K07473	-	ko00000,ko02048	RelB antitoxin
AMKCACLK_00641	9.65e-193	hflC	-	-	O	ko:K04087	-	ko00000,ko00002,ko01000	prohibitin homologues
AMKCACLK_00642	8.77e-158	-	-	-	C	-	-	-	Flavodoxin
AMKCACLK_00643	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
AMKCACLK_00644	1.87e-102	purE	5.4.99.18	-	F	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AMKCACLK_00645	2.69e-276	purK	6.3.4.18	-	F	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AMKCACLK_00646	1.19e-170	purC	6.3.2.6	-	F	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the SAICAR synthetase family
AMKCACLK_00647	1.27e-50	purS	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AMKCACLK_00648	1.56e-154	purQ	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AMKCACLK_00649	0.0	purL	6.3.5.3	-	F	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AMKCACLK_00650	0.0	purF	2.4.2.14	-	F	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
AMKCACLK_00651	2.68e-249	purM	6.3.3.1	-	F	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoribosylformylglycinamidine cyclo-ligase
AMKCACLK_00652	1.78e-134	purN	2.1.2.2	-	F	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AMKCACLK_00653	0.0	purH	2.1.2.3, 3.5.4.10	-	F	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	ko00000,ko00001,ko00002,ko01000,ko04147	Bifunctional purine biosynthesis protein PurH
AMKCACLK_00654	1.47e-303	purD	6.3.4.13	-	F	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the GARS family
AMKCACLK_00655	0.0	-	-	-	L	ko:K07012	-	ko00000,ko01000,ko02048	Type III restriction enzyme, res subunit
AMKCACLK_00656	1.11e-184	cas5	-	-	S	ko:K19119	-	ko00000,ko02048	CRISPR-associated protein (Cas_Cas5)
AMKCACLK_00657	0.0	csd1	-	-	M	ko:K19117	-	ko00000,ko02048	CRISPR-associated protein (Cas_Csd1)
AMKCACLK_00658	5.5e-203	csd2	-	-	L	ko:K19115,ko:K19118	-	ko00000,ko02048	CRISPR-associated protein Cas7
AMKCACLK_00659	5.94e-161	cas4	3.1.12.1	-	L	ko:K07464	-	ko00000,ko01000,ko02048	Domain of unknown function DUF83
AMKCACLK_00660	3.52e-252	cas1	-	-	L	ko:K15342	-	ko00000,ko02048,ko03400	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
AMKCACLK_00661	2.86e-39	cas2	-	-	L	ko:K09951	-	ko00000,ko02048	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
AMKCACLK_00662	1.53e-81	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AMKCACLK_00663	3.15e-25	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AMKCACLK_00664	2.79e-33	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AMKCACLK_00665	0.0	polA	2.7.7.7	-	L	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	ko00000,ko00001,ko01000,ko03032,ko03400	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AMKCACLK_00666	3.73e-202	fpg	3.2.2.23, 4.2.99.18	-	L	ko:K10563	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
AMKCACLK_00667	1.03e-134	coaE	2.7.1.24	-	F	ko:K00859	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
AMKCACLK_00668	5.46e-108	nrdR	-	-	K	ko:K07738	-	ko00000,ko03000	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
AMKCACLK_00669	1.76e-314	dnaB2	-	-	L	ko:K03346	-	ko00000,ko03032	Replication initiation and membrane attachment
AMKCACLK_00670	1.03e-212	dnaI	-	-	L	ko:K11144	-	ko00000,ko03032	Primosomal protein DnaI
AMKCACLK_00671	0.0	thrS	6.1.1.3	-	J	ko:K01868	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AMKCACLK_00672	1.84e-117	-	-	-	-	-	-	-	-
AMKCACLK_00673	1.51e-122	-	-	-	-	-	-	-	-
AMKCACLK_00674	3.9e-247	-	-	-	S	-	-	-	Domain of unknown function (DUF389)
AMKCACLK_00675	2.61e-36	astA	2.8.2.22	-	M	ko:K01023	-	ko00000,ko01000	Arylsulfotransferase Ig-like domain
AMKCACLK_00676	1.28e-194	astA	2.8.2.22	-	M	ko:K01023	-	ko00000,ko01000	Arylsulfotransferase Ig-like domain
AMKCACLK_00677	2.51e-43	astA	2.8.2.22	-	M	ko:K01023	-	ko00000,ko01000	Arylsulfotransferase Ig-like domain
AMKCACLK_00678	4.65e-71	infC	-	-	J	ko:K02520	-	ko00000,ko03012,ko03029	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
AMKCACLK_00679	2.77e-37	rpmI	-	-	J	ko:K02916	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL35 family
AMKCACLK_00680	1.23e-75	rplT	-	-	J	ko:K02887	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AMKCACLK_00681	1.51e-121	yqeG	-	-	S	ko:K07015	-	ko00000	HAD phosphatase, family IIIA
AMKCACLK_00682	3.91e-269	yqeH	-	-	S	ko:K06948	-	ko00000,ko03009	Ribosome biogenesis GTPase YqeH
AMKCACLK_00683	4.51e-156	nadD	2.7.7.18	-	H	ko:K00969	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
AMKCACLK_00684	9.6e-143	yqeK	-	-	H	-	-	-	Hydrolase, HD family
AMKCACLK_00685	3.58e-78	rsfS	-	-	J	ko:K09710	-	ko00000,ko03009	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
AMKCACLK_00686	1.09e-273	ylbM	-	-	S	-	-	-	Belongs to the UPF0348 family
AMKCACLK_00687	2.47e-125	ylbN	-	-	S	ko:K07040	-	ko00000	Uncharacterized ACR, COG1399
AMKCACLK_00688	2.12e-164	csrR	-	-	K	-	-	-	response regulator
AMKCACLK_00689	0.0	arlS	2.7.13.3	-	T	ko:K18940	ko02020,map02020	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	Histidine kinase
AMKCACLK_00690	3.74e-264	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_00691	9.66e-110	-	-	-	S	ko:K19055	-	ko00000,ko01000,ko03016	Aminoacyl-tRNA editing domain
AMKCACLK_00692	7.05e-204	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
AMKCACLK_00693	3.93e-59	acyP	3.6.1.7	-	C	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	ko00000,ko00001,ko01000	Belongs to the acylphosphatase family
AMKCACLK_00694	2.04e-175	spoU	-	-	J	ko:K03437	-	ko00000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AMKCACLK_00695	1.4e-80	yodB	-	-	K	-	-	-	Transcriptional regulator, HxlR family
AMKCACLK_00696	9.05e-258	pheS	6.1.1.20	-	J	ko:K01889	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
AMKCACLK_00697	0.0	pheT	6.1.1.20	-	J	ko:K01890	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
AMKCACLK_00698	2.25e-88	greA	-	-	K	ko:K03624	-	ko00000,ko03021	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
AMKCACLK_00699	1.79e-214	ldh3	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	lactate/malate dehydrogenase, alpha/beta C-terminal domain
AMKCACLK_00700	5.22e-36	-	-	-	S	-	-	-	Phage derived protein Gp49-like (DUF891)
AMKCACLK_00701	5.79e-217	-	-	-	G	-	-	-	BadF/BadG/BcrA/BcrD ATPase family
AMKCACLK_00702	0.0	-	-	-	S	-	-	-	membrane
AMKCACLK_00703	0.0	pbp2b	-	-	M	ko:K00687,ko:K12553,ko:K21465,ko:K21466	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
AMKCACLK_00704	6.25e-29	rpmG	-	-	J	ko:K02913	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL33 family
AMKCACLK_00705	3.12e-129	fthC	6.3.3.2	-	H	ko:K01934	ko00670,ko01100,map00670,map01100	ko00000,ko00001,ko01000	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AMKCACLK_00706	4.44e-151	gluP	3.4.21.105	-	S	ko:K19225	-	ko00000,ko01000,ko01002	Rhomboid family
AMKCACLK_00707	2.45e-44	yqgQ	-	-	S	-	-	-	Bacterial protein of unknown function (DUF910)
AMKCACLK_00708	3.1e-92	yqhL	-	-	P	-	-	-	Rhodanese-like protein
AMKCACLK_00709	9.65e-220	miaA	2.5.1.75	-	F	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	ko00000,ko00001,ko01000,ko01006,ko03016	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
AMKCACLK_00710	2.78e-37	ynbB	-	-	P	-	-	-	aluminum resistance
AMKCACLK_00711	5.31e-215	ynbB	-	-	P	-	-	-	aluminum resistance
AMKCACLK_00712	0.0	glnA	6.3.1.2	-	E	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	ko00000,ko00001,ko01000,ko04147	glutamine synthetase
AMKCACLK_00713	8.93e-173	-	-	-	-	-	-	-	-
AMKCACLK_00714	9.18e-211	-	-	-	-	-	-	-	-
AMKCACLK_00715	6.91e-203	-	-	-	-	-	-	-	-
AMKCACLK_00716	5.27e-38	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
AMKCACLK_00717	1.5e-131	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
AMKCACLK_00718	1.37e-80	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
AMKCACLK_00719	6.23e-244	galE	5.1.3.2	-	M	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the NAD(P)-dependent epimerase dehydratase family
AMKCACLK_00720	4.53e-240	lacM	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	beta-galactosidase
AMKCACLK_00721	0.0	lacL	3.2.1.23	-	G	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 2 family
AMKCACLK_00722	1.25e-241	lacR	-	-	K	ko:K02529	-	ko00000,ko03000	Transcriptional regulator
AMKCACLK_00723	1.81e-29	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
AMKCACLK_00724	2.5e-59	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
AMKCACLK_00725	2.15e-183	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
AMKCACLK_00726	0.0	lacS	-	-	G	ko:K11104,ko:K16209	-	ko00000,ko02000	Transporter
AMKCACLK_00727	6.04e-113	lacZ	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	-beta-galactosidase
AMKCACLK_00728	2.71e-53	lacZ	3.2.1.23	-	G	ko:K12308	ko00052,map00052	ko00000,ko00001,ko01000	-beta-galactosidase
AMKCACLK_00729	2.41e-97	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMKCACLK_00730	4.05e-209	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMKCACLK_00731	1.53e-164	-	-	-	-	-	-	-	-
AMKCACLK_00732	3.42e-210	-	1.1.1.29	-	CH	ko:K00018	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AMKCACLK_00733	4.7e-62	-	-	-	-	-	-	-	-
AMKCACLK_00734	4.72e-72	-	-	-	-	-	-	-	-
AMKCACLK_00735	2.85e-81	ptsG	2.7.1.199, 2.7.1.208	-	G	ko:K02777,ko:K02778,ko:K02779,ko:K02790,ko:K02791	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
AMKCACLK_00736	1.1e-277	-	-	-	EGP	ko:K08196,ko:K08369	-	ko00000,ko02000	Major Facilitator
AMKCACLK_00737	0.0	XK27_00340	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
AMKCACLK_00738	0.0	oppA	-	-	E	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter
AMKCACLK_00739	5.18e-272	-	-	-	Q	-	-	-	Imidazolonepropionase and related amidohydrolases
AMKCACLK_00740	6.96e-81	psiE	-	-	S	ko:K13256	-	ko00000	Phosphate-starvation-inducible E
AMKCACLK_00742	4.02e-283	galK	2.7.1.6	-	F	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
AMKCACLK_00743	0.0	galT	2.7.7.12	-	G	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	ko00000,ko00001,ko00002,ko01000	UDP-glucose--hexose-1-phosphate uridylyltransferase
AMKCACLK_00744	1.6e-251	galM	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the interconversion of alpha and beta anomers of maltose
AMKCACLK_00745	1.98e-189	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMKCACLK_00746	6.18e-105	dltr	-	-	K	-	-	-	response regulator
AMKCACLK_00747	1.37e-62	sptS	-	-	T	-	-	-	Histidine kinase
AMKCACLK_00748	2.8e-147	sptS	-	-	T	-	-	-	Histidine kinase
AMKCACLK_00749	7.52e-264	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
AMKCACLK_00750	3.6e-92	-	-	-	O	-	-	-	OsmC-like protein
AMKCACLK_00751	2.48e-161	-	-	-	S	-	-	-	L-ascorbic acid biosynthetic process
AMKCACLK_00752	5.56e-136	-	-	-	-	-	-	-	-
AMKCACLK_00754	2.06e-92	-	-	-	-	-	-	-	-
AMKCACLK_00755	1.06e-73	-	-	-	-	-	-	-	-
AMKCACLK_00756	3.43e-51	-	-	-	-	-	-	-	-
AMKCACLK_00757	0.0	potE	-	-	E	-	-	-	Amino Acid
AMKCACLK_00758	1.33e-114	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
AMKCACLK_00759	1.16e-86	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
AMKCACLK_00760	2.38e-146	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	methionine synthase, vitamin-B12 independent
AMKCACLK_00763	1.26e-117	-	-	-	-	-	-	-	-
AMKCACLK_00764	7.6e-290	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMKCACLK_00765	1.12e-296	tcaA	-	-	S	ko:K21463	-	ko00000	response to antibiotic
AMKCACLK_00766	0.0	hsdR	3.1.21.3	-	L	ko:K01153	-	ko00000,ko01000,ko02048	DEAD/DEAH box helicase
AMKCACLK_00767	0.0	hsdM	2.1.1.72	-	V	ko:K03427	-	ko00000,ko01000,ko02048	type I restriction-modification system
AMKCACLK_00768	9.93e-75	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	Type I restriction modification DNA specificity domain
AMKCACLK_00769	1.58e-195	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMKCACLK_00770	1.24e-75	-	3.1.21.3	-	V	ko:K01154	-	ko00000,ko01000,ko02048	PFAM restriction modification system DNA specificity domain
AMKCACLK_00772	8.5e-287	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMKCACLK_00775	2.74e-72	mrr2	-	-	L	ko:K07448	-	ko00000,ko02048	restriction endonuclease
AMKCACLK_00776	3.51e-90	mrr2	-	-	L	ko:K07448	-	ko00000,ko02048	restriction endonuclease
AMKCACLK_00777	6.16e-281	-	-	-	S	-	-	-	SLAP domain
AMKCACLK_00779	4.93e-41	-	-	-	-	-	-	-	-
AMKCACLK_00781	7.37e-39	-	-	-	S	-	-	-	Metal binding domain of Ada
AMKCACLK_00782	6.63e-120	-	-	-	L	-	-	-	nuclease
AMKCACLK_00783	1.18e-161	-	-	-	F	ko:K15051	-	ko00000	DNA/RNA non-specific endonuclease
AMKCACLK_00784	1.88e-35	-	-	-	-	-	-	-	-
AMKCACLK_00785	5.99e-148	-	-	-	G	-	-	-	Peptidase_C39 like family
AMKCACLK_00786	2.18e-152	-	-	-	M	-	-	-	NlpC/P60 family
AMKCACLK_00787	1.66e-15	-	-	-	M	-	-	-	NlpC/P60 family
AMKCACLK_00789	5.12e-71	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
AMKCACLK_00790	2.29e-196	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
AMKCACLK_00791	1.29e-156	-	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
AMKCACLK_00792	7.15e-52	-	-	-	-	-	-	-	-
AMKCACLK_00793	1.08e-89	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
AMKCACLK_00794	9.72e-147	glnP9	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter, permease protein
AMKCACLK_00795	9.35e-152	glnP7	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter permease
AMKCACLK_00796	9.75e-174	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
AMKCACLK_00797	2.63e-207	cjaA	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
AMKCACLK_00798	1.32e-68	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
AMKCACLK_00799	3.15e-198	sdaAA	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
AMKCACLK_00800	5.9e-97	-	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
AMKCACLK_00801	6.01e-16	-	4.3.1.17	-	E	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	ko00000,ko00001,ko01000	Serine dehydratase beta chain
AMKCACLK_00802	3.36e-61	-	-	-	-	-	-	-	-
AMKCACLK_00803	1.34e-124	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
AMKCACLK_00804	8.46e-65	-	-	-	-	-	-	-	-
AMKCACLK_00805	2.65e-260	-	-	-	G	-	-	-	Major Facilitator Superfamily
AMKCACLK_00806	5.54e-69	-	-	-	-	-	-	-	-
AMKCACLK_00807	2.04e-272	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_00808	2.92e-61	-	-	-	S	-	-	-	Domain of unknown function (DUF4160)
AMKCACLK_00809	1.08e-52	-	-	-	O	-	-	-	Matrixin
AMKCACLK_00810	3.58e-267	eriC	-	-	P	ko:K03281	-	ko00000	chloride
AMKCACLK_00811	0.0	yoaB	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
AMKCACLK_00812	2.16e-213	yufQ	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
AMKCACLK_00813	2.99e-242	mglC	-	-	S	ko:K02057	-	ko00000,ko00002,ko02000	Belongs to the binding-protein-dependent transport system permease family
AMKCACLK_00814	9.19e-312	mglA	3.6.3.17	-	S	ko:K02056,ko:K06400	-	ko00000,ko00002,ko01000,ko02000	ABC transporter
AMKCACLK_00815	6.81e-234	tcsA	-	-	S	ko:K02058,ko:K07335	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein PnrA-like
AMKCACLK_00816	2.95e-23	-	2.4.2.6	-	F	ko:K08728	ko00240,map00240	ko00000,ko00001,ko01000	Nucleoside 2-deoxyribosyltransferase
AMKCACLK_00817	1.24e-282	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_00818	1.51e-188	ydiM	-	-	G	-	-	-	Major facilitator superfamily
AMKCACLK_00820	2.04e-95	-	-	-	T	ko:K07171	-	ko00000,ko01000,ko02048	PemK-like, MazF-like toxin of type II toxin-antitoxin system
AMKCACLK_00821	3.16e-32	-	-	-	L	-	-	-	IS1381, transposase OrfA
AMKCACLK_00822	2.26e-81	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMKCACLK_00823	5.51e-147	pyrE	2.4.2.10	-	F	ko:K00762	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
AMKCACLK_00824	1.08e-155	pyrF	4.1.1.23	-	F	ko:K01591	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
AMKCACLK_00825	1.03e-210	pyrD	1.3.1.14, 1.3.98.1	-	F	ko:K00226,ko:K17828	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
AMKCACLK_00826	5.63e-120	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
AMKCACLK_00827	2.7e-232	pyrB	2.1.3.2	-	F	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the ATCase OTCase family
AMKCACLK_00828	2.66e-309	pyrC	3.5.2.3	-	F	ko:K01465	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
AMKCACLK_00829	3.47e-268	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
AMKCACLK_00830	0.0	carB	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
AMKCACLK_00832	3.73e-284	-	-	-	E	-	-	-	IrrE N-terminal-like domain
AMKCACLK_00833	1.28e-140	-	-	-	S	-	-	-	Domain of unknown function (DUF4411)
AMKCACLK_00834	4.64e-108	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
AMKCACLK_00835	4.89e-54	-	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
AMKCACLK_00836	1.29e-63	-	-	-	-	-	-	-	-
AMKCACLK_00837	4.44e-104	msrB	1.8.4.12	-	O	ko:K07305	-	ko00000,ko01000	peptide methionine sulfoxide reductase
AMKCACLK_00838	2e-24	-	-	-	-	-	-	-	-
AMKCACLK_00839	8.65e-23	-	-	-	-	-	-	-	-
AMKCACLK_00840	1.47e-105	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
AMKCACLK_00841	1.03e-190	-	-	-	S	-	-	-	Protein of unknown function (DUF2785)
AMKCACLK_00842	9.76e-36	-	-	-	S	-	-	-	MazG-like family
AMKCACLK_00843	2.19e-73	-	-	-	-	-	-	-	-
AMKCACLK_00844	7.55e-58	-	-	-	-	ko:K07473	-	ko00000,ko02048	-
AMKCACLK_00845	1.78e-42	-	-	-	S	-	-	-	Protein of unknown function (DUF3923)
AMKCACLK_00846	1.23e-67	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
AMKCACLK_00847	3.73e-206	yxaM	-	-	EGP	-	-	-	Major facilitator Superfamily
AMKCACLK_00848	2.16e-30	codA	-	-	F	-	-	-	Cytidine and deoxycytidylate deaminase zinc-binding region
AMKCACLK_00849	3.73e-44	cdd	2.4.2.4, 3.5.4.5	-	F	ko:K00758,ko:K01489	ko00240,ko00983,ko01100,ko05219,map00240,map00983,map01100,map05219	ko00000,ko00001,ko01000	cytidine deaminase activity
AMKCACLK_00850	2.64e-119	-	-	-	S	-	-	-	AAA domain
AMKCACLK_00851	2.92e-192	-	-	-	M	-	-	-	Phosphotransferase enzyme family
AMKCACLK_00852	2.14e-185	-	-	-	F	-	-	-	Phosphorylase superfamily
AMKCACLK_00853	5.9e-183	-	-	-	F	-	-	-	Phosphorylase superfamily
AMKCACLK_00854	9.88e-152	-	2.3.1.81	-	V	ko:K00662	-	ko00000,ko01000,ko01504	Aminoglycoside 3-N-acetyltransferase
AMKCACLK_00855	0.0	pepX	3.4.14.11	-	E	ko:K01281	-	ko00000,ko01000,ko01002	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
AMKCACLK_00856	1.17e-79	-	-	-	S	-	-	-	Bacterial PH domain
AMKCACLK_00857	7.87e-37	-	-	-	-	-	-	-	-
AMKCACLK_00858	6.33e-87	yusI	1.20.4.1	-	P	ko:K00537	-	ko00000,ko01000	Belongs to the ArsC family
AMKCACLK_00859	6.1e-228	lipA	-	-	I	-	-	-	Carboxylesterase family
AMKCACLK_00860	2.31e-254	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMKCACLK_00862	1.15e-267	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
AMKCACLK_00863	0.0	-	-	-	S	-	-	-	Predicted membrane protein (DUF2207)
AMKCACLK_00864	4.18e-38	dmpI	5.3.2.6	-	G	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Belongs to the 4-oxalocrotonate tautomerase family
AMKCACLK_00865	7.78e-165	-	-	-	S	-	-	-	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
AMKCACLK_00866	4.64e-256	ilvE	2.6.1.42	-	E	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Branched-chain amino acid aminotransferase
AMKCACLK_00867	0.0	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2325)
AMKCACLK_00868	6.82e-66	rplU	-	-	J	ko:K02888	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein binds to 23S rRNA in the presence of protein L20
AMKCACLK_00869	5.95e-64	rpmA	-	-	J	ko:K02899	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL27 family
AMKCACLK_00870	1.64e-261	pepP	3.4.11.9, 3.4.13.9	-	E	ko:K01262,ko:K01271	-	ko00000,ko01000,ko01002	Creatinase/Prolidase N-terminal domain
AMKCACLK_00871	1e-131	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AMKCACLK_00872	1.89e-90	WQ51_04310	-	-	S	ko:K10947	-	ko00000,ko03000	Asp23 family, cell envelope-related function
AMKCACLK_00873	5.2e-85	nusB	-	-	K	ko:K03625	-	ko00000,ko03009,ko03021	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AMKCACLK_00874	1.83e-196	folD	1.5.1.5, 3.5.4.9	-	F	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
AMKCACLK_00875	5.59e-251	xseA	3.1.11.6	-	L	ko:K03601	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
AMKCACLK_00876	4.4e-47	xseB	3.1.11.6	-	L	ko:K03602	ko03430,map03430	ko00000,ko00001,ko01000,ko03400	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
AMKCACLK_00877	1.45e-201	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29	-	H	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000,ko01006	Belongs to the FPP GGPP synthase family
AMKCACLK_00878	4.68e-193	rrmJ	2.1.1.226, 2.1.1.227	-	J	ko:K06442	-	ko00000,ko01000,ko03009	Ribosomal RNA large subunit methyltransferase J
AMKCACLK_00879	0.0	recN	-	-	L	ko:K03631	-	ko00000,ko03400	May be involved in recombinational repair of damaged DNA
AMKCACLK_00880	1.73e-102	-	-	-	S	-	-	-	ASCH
AMKCACLK_00881	6.69e-142	gmk	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Essential for recycling GMP and indirectly, cGMP
AMKCACLK_00882	5.6e-45	rpoZ	2.7.7.6	-	K	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
AMKCACLK_00883	0.0	priA	-	-	L	ko:K04066	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AMKCACLK_00884	3.93e-221	fmt	2.1.2.9	-	J	ko:K00604	ko00670,ko00970,map00670,map00970	ko00000,ko00001,ko01000	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AMKCACLK_00885	3.5e-312	sun	2.1.1.176	-	J	ko:K03500	-	ko00000,ko01000,ko03009	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AMKCACLK_00886	4.69e-189	stp	3.1.3.16	-	T	ko:K20074	-	ko00000,ko01000,ko01009	phosphatase
AMKCACLK_00887	0.0	prkC	2.7.11.1	-	KLT	ko:K08884,ko:K12132	-	ko00000,ko01000,ko01001	serine threonine protein kinase
AMKCACLK_00888	7.58e-212	rsgA	3.1.3.100	-	S	ko:K06949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
AMKCACLK_00889	4.86e-150	rpe	5.1.3.1	-	G	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the ribulose-phosphate 3-epimerase family
AMKCACLK_00890	6.36e-161	thiN	2.7.6.2	-	H	ko:K00949	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko01000	thiamine pyrophosphokinase
AMKCACLK_00891	4.85e-65	-	-	-	-	-	-	-	-
AMKCACLK_00892	3.82e-35	rpmB	-	-	J	ko:K02902	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL28 family
AMKCACLK_00893	1.67e-74	yloU	-	-	S	-	-	-	Asp23 family, cell envelope-related function
AMKCACLK_00894	0.0	yloV	-	-	S	ko:K07030	-	ko00000	DAK2 domain fusion protein YloV
AMKCACLK_00895	0.0	recG	3.6.4.12	-	L	ko:K03655	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AMKCACLK_00896	1.57e-234	plsX	2.3.1.15	-	I	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
AMKCACLK_00897	3.1e-47	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AMKCACLK_00898	1.17e-246	oppD	-	-	P	ko:K02031,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
AMKCACLK_00899	1.39e-230	oppF	-	-	P	ko:K02032	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
AMKCACLK_00900	6.07e-225	oppB	-	-	P	ko:K02033,ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
AMKCACLK_00901	9.26e-199	oppC5	-	-	P	ko:K02034	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
AMKCACLK_00902	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
AMKCACLK_00903	0.0	oppA	-	-	E	ko:K02035	ko02024,map02024	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
AMKCACLK_00904	1.56e-161	rnc	3.1.26.3	-	J	ko:K03685	ko03008,ko05205,map03008,map05205	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
AMKCACLK_00905	0.0	smc	-	-	D	ko:K03529	-	ko00000,ko03036	Required for chromosome condensation and partitioning
AMKCACLK_00906	1.04e-221	ftsY	-	-	U	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
AMKCACLK_00907	0.0	pepD2	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
AMKCACLK_00908	3.87e-60	-	-	-	-	-	-	-	-
AMKCACLK_00909	0.0	ctrA	-	-	E	ko:K03294	-	ko00000	amino acid
AMKCACLK_00910	8.23e-247	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMKCACLK_00911	1.17e-73	ylxM	-	-	S	ko:K09787	-	ko00000	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
AMKCACLK_00912	3.29e-290	ffh	3.6.5.4	-	U	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko01000,ko02044	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AMKCACLK_00913	2.36e-60	rpsP	-	-	J	ko:K02959	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bS16 family
AMKCACLK_00914	2.34e-119	rimM	-	-	J	ko:K02860	-	ko00000,ko03009	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AMKCACLK_00915	2.41e-175	trmD	2.1.1.228	-	J	ko:K00554	-	ko00000,ko01000,ko03016	Belongs to the RNA methyltransferase TrmD family
AMKCACLK_00916	2.28e-74	rplS	-	-	J	ko:K02884	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
AMKCACLK_00917	2.31e-154	ung2	3.2.2.27	-	L	ko:K21929	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	Uracil-DNA glycosylase
AMKCACLK_00918	3.17e-191	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase family
AMKCACLK_00919	1.99e-145	lexA	3.4.21.88	-	K	ko:K01356	-	ko00000,ko00002,ko01000,ko01002,ko03400	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AMKCACLK_00920	5.3e-49	ynzC	-	-	S	-	-	-	UPF0291 protein
AMKCACLK_00921	6.43e-41	XK26_06720	-	-	S	ko:K09976	-	ko00000	Uncharacterised protein family (UPF0154)
AMKCACLK_00922	0.0	mdlA	-	-	V	ko:K06148,ko:K18889	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
AMKCACLK_00923	0.0	mdlB	-	-	V	ko:K06147,ko:K18890	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
AMKCACLK_00924	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
AMKCACLK_00925	9.19e-287	cfa	2.1.1.79	-	M	ko:K00574	-	ko00000,ko01000	cyclopropane-fatty-acyl-phospholipid synthase
AMKCACLK_00926	1.46e-145	plsC	2.3.1.51	-	I	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Acyltransferase
AMKCACLK_00927	1.82e-254	yabB	2.1.1.223	-	L	ko:K07461,ko:K15460	-	ko00000,ko01000,ko03016	Methyltransferase small domain
AMKCACLK_00928	1.56e-180	rpsB	-	-	J	ko:K02967	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the universal ribosomal protein uS2 family
AMKCACLK_00929	4.33e-236	tsf	-	-	J	ko:K02357	-	ko00000,ko03012,ko03029	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
AMKCACLK_00930	2.38e-167	pyrH	2.7.4.22	-	F	ko:K09903	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphorylation of UMP to UDP
AMKCACLK_00931	2.46e-121	frr	-	-	J	ko:K02838	-	ko00000,ko03012	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
AMKCACLK_00932	3.04e-176	uppS	2.5.1.31	-	H	ko:K00806	ko00900,ko01110,map00900,map01110	ko00000,ko00001,ko01000,ko01006	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AMKCACLK_00933	1.62e-189	cdsA	2.7.7.41	-	I	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	ko00000,ko00001,ko00002,ko01000	Belongs to the CDS family
AMKCACLK_00934	7.42e-253	rseP	-	-	M	ko:K11749	ko02024,ko04112,map02024,map04112	ko00000,ko00001,ko01000,ko01002	zinc metalloprotease
AMKCACLK_00935	0.0	proS	6.1.1.15	-	J	ko:K01881	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
AMKCACLK_00936	0.0	polC	2.7.7.7	-	L	ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AMKCACLK_00937	4.83e-108	rimP	-	-	J	ko:K09748	-	ko00000,ko03009	Required for maturation of 30S ribosomal subunits
AMKCACLK_00938	2.72e-263	nusA	-	-	K	ko:K02600	-	ko00000,ko03009,ko03021	Participates in both transcription termination and antitermination
AMKCACLK_00939	9.2e-64	ylxR	-	-	K	ko:K07742	-	ko00000	Protein of unknown function (DUF448)
AMKCACLK_00940	2.2e-62	ylxQ	-	-	J	-	-	-	ribosomal protein
AMKCACLK_00941	0.0	infB	-	-	J	ko:K02519	-	ko00000,ko03012,ko03029	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
AMKCACLK_00942	6.79e-79	rbfA	-	-	J	ko:K02834	-	ko00000,ko03009	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
AMKCACLK_00943	2.35e-211	truB	5.4.99.25	-	J	ko:K03177,ko:K03483	-	ko00000,ko01000,ko03000,ko03016	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AMKCACLK_00944	3.03e-230	ribF	2.7.1.26, 2.7.7.2	-	H	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	Belongs to the ribF family
AMKCACLK_00945	1.02e-238	hrcA	-	-	K	ko:K03705	-	ko00000,ko03000	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
AMKCACLK_00946	2.79e-115	grpE	-	-	O	ko:K03687	-	ko00000,ko03029,ko03110	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
AMKCACLK_00947	0.0	dnaK	-	-	O	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	Heat shock 70 kDa protein
AMKCACLK_00948	2.28e-271	dnaJ	-	-	O	ko:K03686	-	ko00000,ko03029,ko03110	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
AMKCACLK_00949	1.14e-124	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMKCACLK_00950	1.29e-21	-	-	-	-	-	-	-	-
AMKCACLK_00951	0.0	lepA	-	-	M	ko:K03596	ko05134,map05134	ko00000,ko00001	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
AMKCACLK_00952	1.67e-152	srtA	3.4.22.70	-	M	ko:K07284	-	ko00000,ko01000,ko01002,ko01011	sortase family
AMKCACLK_00953	0.0	recJ	-	-	L	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	ko00000,ko00001,ko01000,ko03400	Single-stranded-DNA-specific exonuclease RecJ
AMKCACLK_00954	1.99e-122	apt	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AMKCACLK_00955	6.48e-215	cysK	2.5.1.47	-	E	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the cysteine synthase cystathionine beta- synthase family
AMKCACLK_00956	1.07e-195	metA	2.3.1.46	-	E	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Transfers an acetyl group from acetyl-CoA to
AMKCACLK_00957	0.0	cls	-	-	I	ko:K06131	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AMKCACLK_00958	3.75e-109	-	3.4.21.96	-	S	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	SLAP domain
AMKCACLK_00959	0.0	-	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
AMKCACLK_00960	4.19e-203	lysR5	-	-	K	-	-	-	LysR substrate binding domain
AMKCACLK_00961	1.32e-33	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
AMKCACLK_00962	5.65e-75	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
AMKCACLK_00963	6.12e-114	arcA	3.5.3.6	-	E	ko:K01478	ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130	ko00000,ko00001,ko01000	Arginine
AMKCACLK_00964	7.7e-17	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AMKCACLK_00965	5.91e-184	argF	2.1.3.3	-	E	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AMKCACLK_00966	3.04e-88	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
AMKCACLK_00967	1.33e-66	arcC	2.7.2.2	-	E	ko:K00926	ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200	ko00000,ko00001,ko01000	Belongs to the carbamate kinase family
AMKCACLK_00968	7.45e-124	citX	2.7.7.61	-	HI	ko:K05964	ko02020,map02020	ko00000,ko00001,ko01000	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
AMKCACLK_00969	3.04e-278	-	-	-	S	-	-	-	Sterol carrier protein domain
AMKCACLK_00970	5.55e-27	-	-	-	-	-	-	-	-
AMKCACLK_00971	5.72e-137	-	-	-	K	-	-	-	LysR substrate binding domain
AMKCACLK_00972	2.71e-98	-	-	-	-	-	-	-	-
AMKCACLK_00974	4.4e-150	-	3.6.3.44	-	V	ko:K02021,ko:K06147,ko:K18104	ko01501,ko02010,map01501,map02010	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	ABC transporter transmembrane region
AMKCACLK_00976	1.38e-311	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_00977	2.44e-235	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
AMKCACLK_00978	5.79e-311	thrC	4.2.3.1	-	E	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Threonine synthase
AMKCACLK_00979	6.86e-154	hom	1.1.1.3	-	E	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	homoserine dehydrogenase
AMKCACLK_00980	1.1e-137	thrB	2.7.1.39	-	F	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
AMKCACLK_00981	1.95e-137	-	-	-	-	-	-	-	-
AMKCACLK_00982	1.78e-208	yitT	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AMKCACLK_00983	3.85e-52	-	-	-	S	-	-	-	Peptidase family M23
AMKCACLK_00984	1.34e-196	yqfL	2.7.11.33, 2.7.4.28	-	F	ko:K09773	-	ko00000,ko01000	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
AMKCACLK_00985	4.83e-30	rpsU	-	-	J	ko:K02970	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bS21 family
AMKCACLK_00986	2.96e-90	yqeY	-	-	S	ko:K09117	-	ko00000	YqeY-like protein
AMKCACLK_00987	7.92e-221	phoH	-	-	T	ko:K06217	-	ko00000	phosphate starvation-inducible protein PhoH
AMKCACLK_00988	1.03e-128	ybeY	-	-	S	ko:K07042	-	ko00000,ko03009	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
AMKCACLK_00989	7.03e-215	era	-	-	S	ko:K03595	-	ko00000,ko03009,ko03029	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
AMKCACLK_00990	2.79e-175	recO	-	-	L	ko:K03584	ko03440,map03440	ko00000,ko00001,ko03400	Involved in DNA repair and RecF pathway recombination
AMKCACLK_00991	2.22e-229	glyQ	6.1.1.14	-	J	ko:K01878	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	glycyl-tRNA synthetase alpha subunit
AMKCACLK_00992	0.0	glyS	6.1.1.14	-	J	ko:K01879	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Glycyl-tRNA synthetase beta subunit
AMKCACLK_00993	0.0	dnaG	-	-	L	ko:K02316	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
AMKCACLK_00994	2.88e-251	sigA	-	-	K	ko:K03086	-	ko00000,ko03021	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
AMKCACLK_00995	3.44e-160	-	-	-	S	-	-	-	Peptidase family M23
AMKCACLK_00996	4.56e-89	-	3.6.1.55	-	F	ko:K03574	-	ko00000,ko01000,ko03400	NUDIX domain
AMKCACLK_00997	7.43e-160	trmK	2.1.1.217	-	S	ko:K06967	-	ko00000,ko01000,ko03016	SAM-dependent methyltransferase
AMKCACLK_00998	3.45e-197	yqfO	-	-	S	-	-	-	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AMKCACLK_00999	6.01e-309	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
AMKCACLK_01000	7.06e-81	lexA	-	-	K	ko:K07979	-	ko00000,ko03000	Transcriptional regulator, GntR family
AMKCACLK_01001	3.13e-160	-	-	-	V	ko:K01990	-	ko00000,ko00002,ko02000	ATPases associated with a variety of cellular activities
AMKCACLK_01002	9.64e-187	-	-	-	-	-	-	-	-
AMKCACLK_01003	6.56e-187	-	-	-	-	-	-	-	-
AMKCACLK_01004	1.19e-177	-	-	-	-	-	-	-	-
AMKCACLK_01005	3.03e-13	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
AMKCACLK_01006	5.68e-146	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
AMKCACLK_01007	7.83e-38	-	-	-	-	-	-	-	-
AMKCACLK_01008	7.35e-134	lepB	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
AMKCACLK_01009	1.83e-180	-	-	-	-	-	-	-	-
AMKCACLK_01010	3.94e-225	-	-	-	-	-	-	-	-
AMKCACLK_01011	0.0	rsmF	-	-	J	-	-	-	NOL1 NOP2 sun family protein
AMKCACLK_01012	1.77e-238	fni	5.3.3.2	-	C	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
AMKCACLK_01013	4.69e-261	mvaK2	2.7.4.2	-	I	ko:K00938	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	phosphomevalonate kinase
AMKCACLK_01014	1.23e-229	mvaD	4.1.1.33	-	I	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	diphosphomevalonate decarboxylase
AMKCACLK_01015	1.53e-214	mvk	2.7.1.36	-	I	ko:K00869	ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146	ko00000,ko00001,ko00002,ko01000	GHMP kinases N terminal domain
AMKCACLK_01016	0.0	rexB	3.6.4.12	-	L	ko:K16899	-	ko00000,ko01000,ko03400	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
AMKCACLK_01017	0.0	addA	3.6.4.12	-	L	ko:K16898	-	ko00000,ko01000,ko03400	ATP-dependent helicase nuclease subunit A
AMKCACLK_01018	1.35e-288	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
AMKCACLK_01019	0.0	dinG	3.6.4.12	-	L	ko:K03722	-	ko00000,ko01000,ko03400	helicase involved in DNA repair and perhaps also replication
AMKCACLK_01020	3.49e-116	ypmB	-	-	S	-	-	-	Protein conserved in bacteria
AMKCACLK_01021	0.0	asnS	6.1.1.22	-	J	ko:K01893	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Asparaginyl-tRNA synthetase
AMKCACLK_01022	5.68e-148	dnaD	-	-	L	ko:K02086	-	ko00000	DnaD domain protein
AMKCACLK_01023	2.95e-146	nth	4.2.99.18	-	L	ko:K10773	ko03410,map03410	ko00000,ko00001,ko01000,ko03400	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AMKCACLK_01024	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01003,ko01011	penicillin-binding protein 1A
AMKCACLK_01025	1.25e-149	recU	-	-	L	ko:K03700	-	ko00000,ko03400	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
AMKCACLK_01026	1.13e-137	ypsA	-	-	S	-	-	-	Belongs to the UPF0398 family
AMKCACLK_01027	1.29e-91	gpsB	-	-	D	-	-	-	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
AMKCACLK_01028	5.4e-274	ypsC	-	-	L	ko:K07444	-	ko00000,ko01000	Belongs to the methyltransferase superfamily
AMKCACLK_01029	2.02e-166	cpdA	-	-	S	-	-	-	Calcineurin-like phosphoesterase
AMKCACLK_01030	4.16e-38	cpdA	-	-	S	-	-	-	Calcineurin-like phosphoesterase
AMKCACLK_01031	2.42e-45	-	-	-	-	-	-	-	-
AMKCACLK_01032	0.0	fhs	6.3.4.3	-	F	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Belongs to the formate--tetrahydrofolate ligase family
AMKCACLK_01033	7.77e-103	lspA	3.4.23.36	-	MU	ko:K03101	ko03060,map03060	ko00000,ko00001,ko01000,ko01002	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
AMKCACLK_01034	6.46e-212	rluD	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
AMKCACLK_01035	1.44e-255	carA	6.3.5.5	-	F	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthetase glutamine chain
AMKCACLK_01036	0.0	carB1	6.3.5.5	-	F	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Carbamoyl-phosphate synthase
AMKCACLK_01037	5.92e-229	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_01038	0.0	FbpA	-	-	K	-	-	-	Fibronectin-binding protein
AMKCACLK_01039	5.69e-86	-	-	-	-	-	-	-	-
AMKCACLK_01040	3.06e-205	-	-	-	S	-	-	-	EDD domain protein, DegV family
AMKCACLK_01041	5.71e-262	xerS	-	-	L	ko:K03733	-	ko00000,ko03036	Belongs to the 'phage' integrase family
AMKCACLK_01042	3.71e-95	-	-	-	-	-	-	-	-
AMKCACLK_01043	2.77e-114	flaR	-	-	F	-	-	-	topology modulation protein
AMKCACLK_01044	1.92e-140	XK27_00160	-	-	S	-	-	-	Domain of unknown function (DUF5052)
AMKCACLK_01045	1.1e-69	-	-	-	-	-	-	-	-
AMKCACLK_01046	5.82e-35	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
AMKCACLK_01047	1.95e-115	-	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
AMKCACLK_01048	7.24e-30	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
AMKCACLK_01049	2.15e-48	-	-	-	S	-	-	-	Transglycosylase associated protein
AMKCACLK_01050	1.25e-184	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMKCACLK_01051	3.04e-82	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMKCACLK_01052	5.77e-111	-	-	-	S	-	-	-	Protein of unknown function (DUF1275)
AMKCACLK_01053	6.39e-73	-	-	-	K	-	-	-	Helix-turn-helix domain
AMKCACLK_01054	5.37e-143	ppiB	5.2.1.8	-	G	ko:K03768	-	ko00000,ko01000,ko03110	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AMKCACLK_01055	7.06e-220	ppaC	3.6.1.1	-	C	ko:K15986	ko00190,map00190	ko00000,ko00001,ko01000	inorganic pyrophosphatase
AMKCACLK_01056	4.25e-219	-	-	-	K	-	-	-	Transcriptional regulator
AMKCACLK_01057	0.0	parC	-	-	L	ko:K02621	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
AMKCACLK_01058	0.0	parE	-	-	L	ko:K02622	-	ko00000,ko01000,ko02048,ko03032,ko03036	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
AMKCACLK_01059	1.02e-138	plsY	2.3.1.15	-	I	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
AMKCACLK_01060	5.72e-120	snf	-	-	KL	-	-	-	domain protein
AMKCACLK_01061	1.53e-124	snf	-	-	KL	-	-	-	domain protein
AMKCACLK_01062	1.74e-203	snf	-	-	KL	-	-	-	domain protein
AMKCACLK_01063	2.89e-50	snf	-	-	KL	-	-	-	domain protein
AMKCACLK_01064	3.72e-22	snf	-	-	KL	-	-	-	domain protein
AMKCACLK_01065	8.57e-43	-	-	-	-	-	-	-	-
AMKCACLK_01066	2.35e-49	-	-	-	-	-	-	-	-
AMKCACLK_01067	9.82e-111	dps	-	-	P	ko:K04047	-	ko00000,ko03036	Belongs to the Dps family
AMKCACLK_01068	2.62e-121	-	-	-	K	-	-	-	acetyltransferase
AMKCACLK_01069	7.02e-212	-	-	-	K	-	-	-	COG COG0846 NAD-dependent protein deacetylases, SIR2 family
AMKCACLK_01070	4.16e-62	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AMKCACLK_01071	1.63e-48	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AMKCACLK_01072	4.75e-138	-	-	-	K	ko:K09705	-	ko00000	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AMKCACLK_01073	4.8e-109	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
AMKCACLK_01074	5.02e-63	-	1.1.1.3	-	T	ko:K00003,ko:K07166	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	phosphoserine phosphatase activity
AMKCACLK_01075	2.82e-185	nfrA	1.5.1.38	-	C	ko:K19285	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	nitroreductase
AMKCACLK_01076	3.33e-49	-	-	-	S	ko:K06889	-	ko00000	Hydrolases of the alpha beta superfamily
AMKCACLK_01077	3.15e-41	-	-	-	S	ko:K06889	-	ko00000	Hydrolases of the alpha beta superfamily
AMKCACLK_01078	2.41e-78	-	-	-	S	-	-	-	Alpha beta hydrolase
AMKCACLK_01079	8.93e-69	-	-	-	K	-	-	-	Acetyltransferase (GNAT) family
AMKCACLK_01080	0.0	gshR3	1.8.1.7	-	C	ko:K00383	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Glutathione reductase
AMKCACLK_01082	1.36e-151	-	-	-	L	-	-	-	Integrase
AMKCACLK_01084	6.96e-157	-	-	-	L	ko:K07497	-	ko00000	hmm pf00665
AMKCACLK_01085	6.18e-159	-	-	-	L	-	-	-	Helix-turn-helix domain
AMKCACLK_01086	8.45e-204	cjaA	-	-	ET	ko:K02030	-	ko00000,ko00002,ko02000	ABC transporter substrate-binding protein
AMKCACLK_01087	1.89e-171	glnQ	3.6.3.21	-	E	ko:K02028	-	ko00000,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
AMKCACLK_01088	6.94e-138	glnP7	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter permease
AMKCACLK_01089	1.32e-144	glnP9	-	-	P	ko:K02029	-	ko00000,ko00002,ko02000	ABC transporter, permease protein
AMKCACLK_01090	1.03e-91	adhR	-	-	K	ko:K21745	-	ko00000,ko03000	helix_turn_helix, mercury resistance
AMKCACLK_01091	5.45e-37	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2255)
AMKCACLK_01092	9.52e-141	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
AMKCACLK_01093	2.61e-133	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	Maltose acetyltransferase
AMKCACLK_01094	1.78e-151	-	-	-	S	ko:K07045	-	ko00000	Amidohydrolase
AMKCACLK_01095	4.4e-44	-	-	-	S	ko:K07045	-	ko00000	Amidohydrolase
AMKCACLK_01097	8.81e-82	-	-	-	S	-	-	-	Abi-like protein
AMKCACLK_01098	8.62e-109	kptA	-	-	H	ko:K07559	-	ko00000,ko01000,ko03016	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
AMKCACLK_01099	4e-88	fabK	1.3.1.9	-	S	ko:K02371	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Nitronate monooxygenase
AMKCACLK_01100	7.55e-44	-	-	-	-	-	-	-	-
AMKCACLK_01101	3.51e-291	-	-	-	L	ko:K07478	-	ko00000	AAA C-terminal domain
AMKCACLK_01102	3.37e-190	glxR	1.1.1.31	-	I	ko:K00020	ko00280,ko01100,map00280,map01100	ko00000,ko00001,ko01000	Dehydrogenase
AMKCACLK_01103	8.01e-68	-	-	-	-	-	-	-	-
AMKCACLK_01104	1.44e-31	-	-	-	K	ko:K07729	-	ko00000,ko03000	Helix-turn-helix XRE-family like proteins
AMKCACLK_01105	1.35e-161	nth2	-	-	L	ko:K07457	-	ko00000	Base excision DNA repair protein, HhH-GPD family
AMKCACLK_01106	1.66e-56	-	-	-	-	-	-	-	-
AMKCACLK_01107	7.65e-101	-	-	-	K	-	-	-	LytTr DNA-binding domain
AMKCACLK_01108	3.57e-84	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
AMKCACLK_01109	1.6e-114	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
AMKCACLK_01110	7.54e-174	-	-	-	-	-	-	-	-
AMKCACLK_01111	3.44e-58	-	-	-	-	-	-	-	-
AMKCACLK_01112	0.0	ppc	4.1.1.31	-	H	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
AMKCACLK_01113	1.28e-241	flp	-	-	V	-	-	-	Beta-lactamase
AMKCACLK_01114	0.0	pepV	3.5.1.18	-	E	ko:K01270,ko:K01274,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	dipeptidase PepV
AMKCACLK_01115	5.02e-73	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
AMKCACLK_01116	9.04e-87	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
AMKCACLK_01117	6.83e-84	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
AMKCACLK_01118	2.75e-09	-	-	-	-	-	-	-	-
AMKCACLK_01119	1.95e-108	tdh	1.1.1.14	-	C	ko:K00008	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko00002,ko01000	Zinc-binding dehydrogenase
AMKCACLK_01120	2.62e-104	tdh	1.1.1.14	-	C	ko:K00008	ko00040,ko00051,ko01100,map00040,map00051,map01100	ko00000,ko00001,ko00002,ko01000	Zinc-binding dehydrogenase
AMKCACLK_01121	1.48e-25	-	-	-	-	-	-	-	-
AMKCACLK_01122	1.15e-15	ubiX	2.5.1.129	-	H	ko:K03186	ko00130,ko00627,ko00940,ko01100,ko01110,ko01120,ko01220,map00130,map00627,map00940,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
AMKCACLK_01123	9.7e-304	yclC	4.1.1.61, 4.1.1.98	-	H	ko:K01612,ko:K03182,ko:K16874	ko00130,ko00365,ko00627,ko01100,ko01110,ko01120,ko01220,map00130,map00365,map00627,map01100,map01110,map01120,map01220	ko00000,ko00001,ko00002,ko01000	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
AMKCACLK_01124	5.97e-56	mleR2	-	-	K	-	-	-	LysR substrate binding domain
AMKCACLK_01125	2.43e-18	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
AMKCACLK_01126	1.33e-88	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
AMKCACLK_01127	3.05e-307	brnQ	-	-	U	ko:K03311	-	ko00000	Component of the transport system for branched-chain amino acids
AMKCACLK_01128	2.03e-73	-	-	-	-	-	-	-	-
AMKCACLK_01129	4.15e-48	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
AMKCACLK_01130	2.82e-152	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
AMKCACLK_01131	8.9e-51	-	-	-	-	-	-	-	-
AMKCACLK_01132	5.43e-133	-	-	-	S	ko:K07038	-	ko00000	LexA-binding, inner membrane-associated putative hydrolase
AMKCACLK_01133	6.67e-32	-	-	-	-	-	-	-	-
AMKCACLK_01134	4.86e-120	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
AMKCACLK_01135	0.0	-	-	-	S	-	-	-	C4-dicarboxylate anaerobic carrier
AMKCACLK_01136	8.08e-262	-	-	-	-	-	-	-	-
AMKCACLK_01137	3.64e-84	-	1.8.1.7	-	C	ko:K00383,ko:K21739	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulfide oxidoreductase
AMKCACLK_01138	1.37e-66	-	1.8.1.7	-	C	ko:K00383,ko:K21739	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulfide oxidoreductase
AMKCACLK_01139	1.58e-33	-	1.8.1.7	-	C	ko:K00383,ko:K21739	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulfide oxidoreductase
AMKCACLK_01140	5.78e-308	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
AMKCACLK_01141	5.93e-289	ybgF	-	-	E	ko:K02205,ko:K03293,ko:K16235,ko:K16236	-	ko00000,ko02000	amino acid
AMKCACLK_01142	1.08e-237	mmuM	2.1.1.10	-	H	ko:K00547	ko00270,ko01100,ko01110,map00270,map01100,map01110	ko00000,ko00001,ko01000	homocysteine S-methyltransferase
AMKCACLK_01143	1.48e-293	amd	-	-	E	-	-	-	Peptidase family M20/M25/M40
AMKCACLK_01144	6.45e-301	steT	-	-	E	ko:K03294	-	ko00000	amino acid
AMKCACLK_01145	2.77e-78	-	-	-	S	ko:K07006	-	ko00000	Pyridoxamine 5'-phosphate oxidase
AMKCACLK_01146	0.0	pepO	-	-	O	ko:K07386	-	ko00000,ko01000,ko01002	Peptidase family M13
AMKCACLK_01147	0.0	XK27_00340	3.1.3.5	-	F	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
AMKCACLK_01148	3.21e-24	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMKCACLK_01149	1.6e-54	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMKCACLK_01150	1.57e-16	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMKCACLK_01151	3.83e-213	-	-	-	-	-	-	-	-
AMKCACLK_01152	4.04e-88	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMKCACLK_01153	3.95e-177	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMKCACLK_01154	2.46e-29	-	-	-	S	-	-	-	Domain of unknown function (DUF4298)
AMKCACLK_01155	1.16e-96	-	-	-	L	-	-	-	Transposase DDE domain
AMKCACLK_01156	1.06e-44	-	-	-	L	-	-	-	DnaB-like helicase C terminal domain
AMKCACLK_01158	0.0	prtB	3.4.21.96	-	O	ko:K01361	-	ko00000,ko01000,ko01002,ko03110	Belongs to the peptidase S8 family
AMKCACLK_01159	8.5e-287	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMKCACLK_01160	6.51e-106	-	-	-	-	-	-	-	-
AMKCACLK_01161	1.38e-33	-	-	-	-	-	-	-	-
AMKCACLK_01162	3.58e-261	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_01163	2.7e-278	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
AMKCACLK_01164	0.0	-	-	-	N	ko:K09384	-	ko00000	Uncharacterized conserved protein (DUF2075)
AMKCACLK_01165	2.24e-203	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMKCACLK_01171	2.01e-137	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
AMKCACLK_01172	1.3e-152	-	-	-	S	-	-	-	Membrane
AMKCACLK_01173	1.7e-55	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
AMKCACLK_01174	2.88e-279	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_01175	3.16e-32	-	-	-	L	-	-	-	IS1381, transposase OrfA
AMKCACLK_01176	1.6e-22	-	-	-	L	-	-	-	helicase
AMKCACLK_01177	0.0	-	-	-	S	-	-	-	Protein of unknown function DUF262
AMKCACLK_01178	8.15e-48	-	-	-	S	-	-	-	Protein of unknown function DUF262
AMKCACLK_01179	3.63e-91	-	-	-	-	-	-	-	-
AMKCACLK_01180	1.69e-49	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
AMKCACLK_01181	3.49e-70	-	-	-	K	-	-	-	Acetyltransferase (GNAT) family
AMKCACLK_01182	1.39e-141	fnr	-	-	K	ko:K21562	-	ko00000,ko03000	Transcriptional regulator, Crp Fnr family
AMKCACLK_01183	4.61e-98	dpsB	-	-	P	-	-	-	Belongs to the Dps family
AMKCACLK_01184	2.21e-34	dpsB	-	-	P	-	-	-	Belongs to the Dps family
AMKCACLK_01185	8.35e-15	-	-	-	C	-	-	-	Heavy-metal-associated domain
AMKCACLK_01186	2.83e-20	-	-	-	C	-	-	-	Heavy-metal-associated domain
AMKCACLK_01187	0.0	cadA	3.6.3.3, 3.6.3.5	-	P	ko:K01534	-	ko00000,ko01000	E1-E2 ATPase
AMKCACLK_01188	8.38e-62	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
AMKCACLK_01189	6.85e-26	adh1	1.1.1.1	-	E	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	alcohol dehydrogenase
AMKCACLK_01190	0.0	npr	1.11.1.1	-	C	ko:K05910	-	ko00000,ko01000	NADH oxidase
AMKCACLK_01191	2.4e-89	-	-	-	S	-	-	-	pyridoxamine 5-phosphate
AMKCACLK_01192	1.54e-218	yobV3	-	-	K	-	-	-	WYL domain
AMKCACLK_01193	1.4e-104	-	-	-	S	-	-	-	Pyridoxamine 5'-phosphate oxidase
AMKCACLK_01194	1.02e-42	-	-	-	-	-	-	-	-
AMKCACLK_01195	4.07e-107	-	-	-	S	-	-	-	An automated process has identified a potential problem with this gene model
AMKCACLK_01196	9.98e-180	-	-	-	S	-	-	-	Protein of unknown function (DUF3100)
AMKCACLK_01197	1.05e-313	-	-	-	S	ko:K12941	-	ko00000,ko01002	Peptidase dimerisation domain
AMKCACLK_01198	1.47e-71	-	4.4.1.5	-	E	ko:K01759	ko00620,map00620	ko00000,ko00001,ko01000	lactoylglutathione lyase activity
AMKCACLK_01199	2.36e-84	-	-	-	S	-	-	-	ASCH domain
AMKCACLK_01200	1.05e-142	msrA	1.8.4.11, 1.8.4.12	-	O	ko:K07304,ko:K12267	-	ko00000,ko01000	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AMKCACLK_01201	7.07e-106	-	-	-	-	-	-	-	-
AMKCACLK_01202	0.0	-	-	-	-	-	-	-	-
AMKCACLK_01203	5.15e-175	treC	3.2.1.93	GH13	G	ko:K01226	ko00500,map00500	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain protein
AMKCACLK_01204	4.73e-102	-	-	-	L	-	-	-	COG3385 FOG Transposase and inactivated derivatives
AMKCACLK_01205	7.94e-160	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	Transport permease protein
AMKCACLK_01206	1.26e-159	-	-	-	V	ko:K01992	-	ko00000,ko00002,ko02000	Transport permease protein
AMKCACLK_01207	3.38e-173	natA	3.6.3.7	-	CP	ko:K01990,ko:K09697	ko02010,ko02020,map02010,map02020	ko00000,ko00001,ko00002,ko01000,ko02000	ATPases associated with a variety of cellular activities
AMKCACLK_01208	1.65e-55	-	-	-	-	-	-	-	-
AMKCACLK_01209	9.54e-49	-	-	-	-	-	-	-	-
AMKCACLK_01210	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
AMKCACLK_01211	4.85e-46	-	-	-	KLT	-	-	-	serine threonine protein kinase
AMKCACLK_01212	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
AMKCACLK_01213	2.73e-283	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMKCACLK_01214	0.0	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
AMKCACLK_01215	0.0	-	-	-	L	-	-	-	Probable transposase
AMKCACLK_01216	2.15e-137	-	-	-	L	-	-	-	Resolvase, N terminal domain
AMKCACLK_01217	2.3e-96	-	-	-	S	-	-	-	Protein of unknown function (DUF3021)
AMKCACLK_01218	1.96e-98	-	-	-	K	-	-	-	LytTr DNA-binding domain
AMKCACLK_01219	3.82e-137	-	3.6.1.66	-	F	ko:K02428	ko00230,map00230	ko00000,ko00001,ko01000	Ham1 family
AMKCACLK_01221	2.21e-08	-	-	-	S	-	-	-	Protein of unknown function (DUF3923)
AMKCACLK_01222	0.0	uvrA2	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	excinuclease ABC, A subunit
AMKCACLK_01223	5.75e-124	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
AMKCACLK_01224	3e-48	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
AMKCACLK_01225	1.47e-80	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
AMKCACLK_01227	7.56e-77	-	-	-	S	-	-	-	YjbR
AMKCACLK_01228	2.15e-113	-	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, permease protein
AMKCACLK_01229	3.92e-141	proV	-	-	E	ko:K05847	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
AMKCACLK_01230	1.17e-114	proWZ	-	-	P	ko:K05846	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
AMKCACLK_01231	9.37e-187	proWY	-	-	M	ko:K05845	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, substrate-binding protein, QAT family
AMKCACLK_01232	7.05e-157	-	-	-	C	-	-	-	Zinc-binding dehydrogenase
AMKCACLK_01233	1.47e-63	-	-	-	S	-	-	-	Membrane
AMKCACLK_01234	1.36e-114	-	-	-	S	-	-	-	Membrane
AMKCACLK_01235	5.95e-95	-	-	-	I	-	-	-	Alpha/beta hydrolase family
AMKCACLK_01236	4.61e-42	bioY2	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Biotin synthase
AMKCACLK_01237	1.11e-37	-	-	-	S	-	-	-	HicB family
AMKCACLK_01240	7.52e-80	-	-	-	S	-	-	-	Bacterial toxin of type II toxin-antitoxin system, YafQ
AMKCACLK_01241	2.73e-60	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
AMKCACLK_01242	1.12e-90	-	-	-	S	-	-	-	Nucleotidyl transferase AbiEii toxin, Type IV TA system
AMKCACLK_01243	7.18e-124	-	-	-	K	-	-	-	Transcriptional regulator, AbiEi antitoxin
AMKCACLK_01244	1.91e-107	-	-	-	L	-	-	-	Integrase
AMKCACLK_01245	4.3e-293	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
AMKCACLK_01246	1.85e-58	-	-	-	-	-	-	-	-
AMKCACLK_01247	2.02e-107	-	-	-	S	-	-	-	Domain of unknown function (DUF5067)
AMKCACLK_01248	4.45e-83	-	-	-	-	-	-	-	-
AMKCACLK_01249	3.74e-154	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
AMKCACLK_01250	4.27e-124	-	-	-	F	-	-	-	Phosphorylase superfamily
AMKCACLK_01251	3.64e-201	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMKCACLK_01252	3.37e-36	-	-	-	F	-	-	-	Phosphorylase superfamily
AMKCACLK_01253	9.45e-99	codA	-	-	F	-	-	-	Cytidine and deoxycytidylate deaminase zinc-binding region
AMKCACLK_01255	1.24e-103	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
AMKCACLK_01256	5.56e-69	-	-	-	-	-	-	-	-
AMKCACLK_01257	4.52e-264	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_01258	8.72e-172	-	-	-	-	-	-	-	-
AMKCACLK_01259	9.5e-264	-	-	-	EGP	-	-	-	Major Facilitator Superfamily
AMKCACLK_01260	3.34e-132	-	-	-	-	-	-	-	-
AMKCACLK_01261	5.12e-151	-	-	-	S	-	-	-	Fic/DOC family
AMKCACLK_01262	2.07e-86	-	-	-	-	-	-	-	-
AMKCACLK_01263	5.1e-102	-	-	-	-	-	-	-	-
AMKCACLK_01265	3.06e-77	-	-	-	S	ko:K08987	-	ko00000	Protein of unknown function (DUF1304)
AMKCACLK_01266	1.18e-126	-	-	-	S	ko:K11621	ko02020,map02020	ko00000,ko00001	Putative adhesin
AMKCACLK_01267	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC-type multidrug transport system, ATPase and permease components
AMKCACLK_01268	0.0	-	-	-	P	ko:K06148	-	ko00000,ko02000	ABC transporter
AMKCACLK_01269	2.32e-79	-	-	-	-	-	-	-	-
AMKCACLK_01270	4.31e-40	-	-	-	D	ko:K04095	-	ko00000,ko03036	Fic/DOC family
AMKCACLK_01271	9.66e-46	-	-	-	-	-	-	-	-
AMKCACLK_01272	0.0	pepT	3.4.11.4	-	E	ko:K01258	-	ko00000,ko01000,ko01002	Cleaves the N-terminal amino acid of tripeptides
AMKCACLK_01273	1.21e-301	mepA	-	-	V	ko:K18908	-	ko00000,ko00002,ko01504,ko02000	MATE efflux family protein
AMKCACLK_01274	1.43e-294	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
AMKCACLK_01275	8.22e-120	-	-	-	S	-	-	-	ECF-type riboflavin transporter, S component
AMKCACLK_01276	9.09e-193	pdxK	2.7.1.35	-	H	ko:K00868	ko00750,ko01100,map00750,map01100	ko00000,ko00001,ko01000	Phosphomethylpyrimidine kinase
AMKCACLK_01277	3.74e-265	-	-	-	V	-	-	-	Beta-lactamase
AMKCACLK_01278	1.46e-145	maa3	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
AMKCACLK_01279	6.65e-145	-	-	-	I	-	-	-	Acid phosphatase homologues
AMKCACLK_01280	1.53e-102	-	-	-	C	-	-	-	Flavodoxin
AMKCACLK_01281	0.0	recQ	3.6.4.12	-	L	ko:K03654	ko03018,map03018	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase RecQ
AMKCACLK_01282	5.26e-224	ktrB	-	-	P	ko:K03498	-	ko00000,ko02000	Potassium uptake protein
AMKCACLK_01283	2.2e-114	ktrA	-	-	P	ko:K03499	-	ko00000,ko02000	domain protein
AMKCACLK_01284	1.27e-313	ynbB	-	-	P	-	-	-	aluminum resistance
AMKCACLK_01285	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
AMKCACLK_01286	2.42e-123	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMKCACLK_01287	1.87e-203	-	-	-	E	-	-	-	Amino acid permease
AMKCACLK_01288	1.51e-121	-	-	-	E	-	-	-	Amino acid permease
AMKCACLK_01289	5.62e-28	-	-	-	C	-	-	-	Pyridoxamine 5'-phosphate oxidase
AMKCACLK_01290	2.86e-267	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_01291	9.88e-39	-	-	-	C	-	-	-	Pyridoxamine 5'-phosphate oxidase
AMKCACLK_01292	2.08e-84	crcB	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AMKCACLK_01293	6.91e-84	crcB1	-	-	U	ko:K06199	-	ko00000,ko02000	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AMKCACLK_01294	1.22e-306	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMKCACLK_01295	2.61e-195	-	-	-	L	-	-	-	Phage integrase, N-terminal SAM-like domain
AMKCACLK_01297	9.05e-258	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
AMKCACLK_01298	9e-226	lacX	5.1.3.3	-	G	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Aldose 1-epimerase
AMKCACLK_01299	3.67e-310	hslU	-	-	O	ko:K03667	-	ko00000,ko03110	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
AMKCACLK_01300	5.68e-117	hslV	3.4.25.2	-	O	ko:K01419	-	ko00000,ko01000,ko01002	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
AMKCACLK_01301	3.92e-217	xerC	-	-	D	ko:K03733,ko:K04763	-	ko00000,ko03036	Phage integrase, N-terminal SAM-like domain
AMKCACLK_01302	3.98e-313	trmFO	2.1.1.74	-	J	ko:K04094	-	ko00000,ko01000,ko03016,ko03036	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
AMKCACLK_01303	0.0	topA	5.99.1.2	-	L	ko:K03168	-	ko00000,ko01000,ko03032,ko03400	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AMKCACLK_01304	8.1e-200	dprA	-	-	LU	ko:K04096	-	ko00000	DNA protecting protein DprA
AMKCACLK_01305	2.94e-30	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AMKCACLK_01306	9.9e-117	rnhB	3.1.26.4	-	L	ko:K03470	ko03030,map03030	ko00000,ko00001,ko01000,ko03032	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AMKCACLK_01307	1.3e-201	rbgA	-	-	S	ko:K14540	-	ko00000,ko03009	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
AMKCACLK_01308	0.0	nhaP4	-	-	P	ko:K03316	-	ko00000	Sodium proton antiporter
AMKCACLK_01309	9.85e-49	yozE	-	-	S	-	-	-	Belongs to the UPF0346 family
AMKCACLK_01310	8.27e-191	degV3	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
AMKCACLK_01311	2.1e-151	hlyIII	-	-	S	ko:K11068	-	ko00000,ko02042	protein, hemolysin III
AMKCACLK_01312	3.21e-264	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_01313	4.38e-245	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
AMKCACLK_01314	4.4e-288	cca	2.7.7.72	-	J	ko:K00974	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
AMKCACLK_01315	8.42e-204	XK27_10395	-	-	S	-	-	-	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AMKCACLK_01316	3.68e-295	XK27_05225	-	-	S	-	-	-	Tetratricopeptide repeat protein
AMKCACLK_01317	1.17e-56	hup	-	-	L	ko:K03530	-	ko00000,ko03032,ko03036,ko03400	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
AMKCACLK_01318	1.82e-312	der	-	-	S	ko:K03977	-	ko00000,ko03009	GTPase that plays an essential role in the late steps of ribosome biogenesis
AMKCACLK_01319	5.19e-273	rpsA	-	-	J	ko:K02945	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Ribosomal protein S1
AMKCACLK_01320	2.57e-149	cmk	2.7.4.25	-	F	ko:K00945	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the cytidylate kinase family. Type 1 subfamily
AMKCACLK_01321	3.4e-56	-	-	-	M	-	-	-	Lysin motif
AMKCACLK_01322	1.31e-149	ribU	-	-	U	-	-	-	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
AMKCACLK_01323	3.66e-165	rluB	5.4.99.22	-	J	ko:K06178	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
AMKCACLK_01324	1.16e-134	scpB	-	-	D	ko:K06024	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
AMKCACLK_01325	1.22e-167	scpA	-	-	D	ko:K05896	-	ko00000,ko03036	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
AMKCACLK_01326	1.62e-80	ribT	-	-	K	ko:K02859	-	ko00000	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
AMKCACLK_01327	1.48e-216	xerD	-	-	D	ko:K04763	-	ko00000,ko03036	recombinase XerD
AMKCACLK_01328	1.26e-215	yitL	-	-	S	ko:K00243	-	ko00000	S1 domain
AMKCACLK_01329	0.0	pyk	2.7.1.40	-	G	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the pyruvate kinase family
AMKCACLK_01330	6.65e-234	pfkA	2.7.1.11	-	F	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
AMKCACLK_01331	0.0	dnaE	2.7.7.7	-	L	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase
AMKCACLK_01332	9.47e-43	-	-	-	S	-	-	-	Protein of unknown function (DUF2929)
AMKCACLK_01333	0.0	yfkN	3.1.3.6, 3.1.4.16	-	F	ko:K01119	ko00230,ko00240,map00230,map00240	ko00000,ko00001,ko01000	Belongs to the 5'-nucleotidase family
AMKCACLK_01334	3.62e-38	rpmF	-	-	J	ko:K02911	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	Belongs to the bacterial ribosomal protein bL32 family
AMKCACLK_01335	6.62e-48	-	-	-	S	-	-	-	Lipopolysaccharide assembly protein A domain
AMKCACLK_01336	7.14e-185	-	-	-	S	ko:K07124	-	ko00000	Belongs to the short-chain dehydrogenases reductases (SDR) family
AMKCACLK_01337	3.02e-226	rnz	3.1.26.11	-	J	ko:K00784	ko03013,map03013	ko00000,ko00001,ko01000,ko03016	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
AMKCACLK_01338	0.0	oatA	-	-	I	-	-	-	Acyltransferase
AMKCACLK_01339	1.55e-308	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
AMKCACLK_01340	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
AMKCACLK_01341	2.12e-111	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
AMKCACLK_01342	2.24e-106	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
AMKCACLK_01343	3.32e-14	yngC	-	-	S	-	-	-	SNARE associated Golgi protein
AMKCACLK_01344	2.5e-97	yngC	-	-	S	-	-	-	SNARE associated Golgi protein
AMKCACLK_01345	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
AMKCACLK_01346	4.95e-57	gyaR	1.1.1.215, 1.1.1.26, 1.1.1.79, 1.1.1.81	-	CH	ko:K00015,ko:K00090	ko00030,ko00260,ko00620,ko00630,ko01100,ko01110,ko01120,map00030,map00260,map00620,map00630,map01100,map01110,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AMKCACLK_01347	4.04e-101	gyaR	1.1.1.26, 1.1.1.399, 1.1.1.95	-	CH	ko:K00015,ko:K00058	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AMKCACLK_01348	1.04e-19	gyaR	1.1.1.215, 1.1.1.26, 1.1.1.79, 1.1.1.81	-	CH	ko:K00015,ko:K00090	ko00030,ko00260,ko00620,ko00630,ko01100,ko01110,ko01120,map00030,map00260,map00620,map00630,map01100,map01110,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AMKCACLK_01349	2.29e-34	yxeH	-	-	S	-	-	-	hydrolase
AMKCACLK_01350	1.58e-110	yxeH	-	-	S	-	-	-	hydrolase
AMKCACLK_01351	2.52e-95	-	-	-	S	-	-	-	reductase
AMKCACLK_01352	3.02e-46	-	-	-	S	-	-	-	reductase
AMKCACLK_01353	4.5e-280	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AMKCACLK_01354	1.76e-94	-	-	-	L	-	-	-	IS1381, transposase OrfA
AMKCACLK_01355	0.0	oatA	-	-	I	-	-	-	Acyltransferase
AMKCACLK_01356	1.55e-308	obg	-	-	S	ko:K03979	-	ko00000,ko01000,ko03009	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
AMKCACLK_01357	0.0	uvrC	-	-	L	ko:K03703	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
AMKCACLK_01358	2.12e-111	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
AMKCACLK_01359	2.24e-106	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
AMKCACLK_01360	3.32e-14	yngC	-	-	S	-	-	-	SNARE associated Golgi protein
AMKCACLK_01361	2.5e-97	yngC	-	-	S	-	-	-	SNARE associated Golgi protein
AMKCACLK_01362	0.0	yhdG	-	-	E	ko:K03294	-	ko00000	Amino Acid
AMKCACLK_01363	4.95e-57	gyaR	1.1.1.215, 1.1.1.26, 1.1.1.79, 1.1.1.81	-	CH	ko:K00015,ko:K00090	ko00030,ko00260,ko00620,ko00630,ko01100,ko01110,ko01120,map00030,map00260,map00620,map00630,map01100,map01110,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AMKCACLK_01364	4.04e-101	gyaR	1.1.1.26, 1.1.1.399, 1.1.1.95	-	CH	ko:K00015,ko:K00058	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AMKCACLK_01365	1.04e-19	gyaR	1.1.1.215, 1.1.1.26, 1.1.1.79, 1.1.1.81	-	CH	ko:K00015,ko:K00090	ko00030,ko00260,ko00620,ko00630,ko01100,ko01110,ko01120,map00030,map00260,map00620,map00630,map01100,map01110,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AMKCACLK_01366	2.29e-34	yxeH	-	-	S	-	-	-	hydrolase
AMKCACLK_01367	1.58e-110	yxeH	-	-	S	-	-	-	hydrolase
AMKCACLK_01368	2.52e-95	-	-	-	S	-	-	-	reductase
AMKCACLK_01369	3.02e-46	-	-	-	S	-	-	-	reductase
AMKCACLK_01370	4.5e-280	coaBC	4.1.1.36, 6.3.2.5	-	H	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AMKCACLK_01371	6.43e-283	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
AMKCACLK_01372	0.0	aspS	6.1.1.12	-	J	ko:K01876	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
AMKCACLK_01373	3.01e-312	hisS	6.1.1.21	-	J	ko:K01892	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	histidyl-tRNA synthetase
AMKCACLK_01374	4.97e-97	dtd	-	-	J	ko:K07560	-	ko00000,ko01000,ko03016	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
AMKCACLK_01375	0.0	relA	2.7.6.5	-	KT	ko:K00951	ko00230,map00230	ko00000,ko00001,ko01000	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AMKCACLK_01376	1.55e-79	-	-	-	-	-	-	-	-
AMKCACLK_01377	1.43e-221	prmA	-	-	J	ko:K02687	-	ko00000,ko01000,ko03009	Ribosomal protein L11 methyltransferase
AMKCACLK_01378	8.81e-114	ybaK	-	-	S	ko:K03976	-	ko00000,ko01000,ko03016	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AMKCACLK_01379	2.51e-33	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMKCACLK_01380	5.51e-227	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMKCACLK_01381	9.63e-292	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
AMKCACLK_01382	1.04e-125	-	-	-	S	ko:K06910	-	ko00000	Phosphatidylethanolamine-binding protein
AMKCACLK_01383	0.0	-	-	-	S	-	-	-	Putative threonine/serine exporter
AMKCACLK_01384	1.43e-222	citR	-	-	K	-	-	-	Putative sugar-binding domain
AMKCACLK_01385	2.78e-67	-	-	-	-	-	-	-	-
AMKCACLK_01386	3.15e-22	-	-	-	-	-	-	-	-
AMKCACLK_01387	1.64e-86	-	-	-	S	-	-	-	Domain of unknown function DUF1828
AMKCACLK_01388	1.22e-121	-	-	-	S	ko:K16924	-	ko00000,ko00002,ko02000	UPF0397 protein
AMKCACLK_01389	0.0	ykoD	-	-	P	ko:K16786,ko:K16787	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
AMKCACLK_01390	4.46e-190	cbiQ	-	-	P	ko:K16785	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	cobalt transport
AMKCACLK_01391	4.84e-23	-	-	-	-	-	-	-	-
AMKCACLK_01392	3.56e-93	ytwI	-	-	S	-	-	-	Protein of unknown function (DUF441)
AMKCACLK_01393	1.38e-97	M1-431	-	-	S	-	-	-	Protein of unknown function (DUF1706)
AMKCACLK_01394	2.39e-115	-	-	-	-	-	-	-	-
AMKCACLK_01395	0.0	citF	2.8.3.10	-	H	ko:K01643	ko02020,map02020	ko00000,ko00001,ko01000	Citrate (pro-3S)-lyase alpha chain
AMKCACLK_01396	3.09e-215	citE	4.1.3.34	-	G	ko:K01644	ko02020,map02020	ko00000,ko00001,ko01000	Belongs to the HpcH HpaI aldolase family
AMKCACLK_01397	2.27e-59	citD	-	-	C	ko:K01646	ko02020,map02020	ko00000,ko00001	Covalent carrier of the coenzyme of citrate lyase
AMKCACLK_01398	5.82e-250	citC	6.2.1.22	-	H	ko:K01910	ko02020,map02020	ko00000,ko00001,ko01000	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
AMKCACLK_01399	1.4e-195	-	-	-	I	-	-	-	Alpha/beta hydrolase family
AMKCACLK_01400	0.0	citP	-	-	P	ko:K03319	-	ko00000	Sodium:sulfate symporter transmembrane region
AMKCACLK_01401	0.0	pepC4	3.4.22.40	-	E	ko:K01372	-	ko00000,ko01000,ko01002	Peptidase C1-like family
AMKCACLK_01402	2.81e-64	-	-	-	-	-	-	-	-
AMKCACLK_01403	5.49e-53	-	-	-	-	-	-	-	-
AMKCACLK_01404	6.24e-83	-	-	-	M	-	-	-	Rib/alpha-like repeat
AMKCACLK_01405	6e-215	ldh	1.1.1.27	-	C	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922	ko00000,ko00001,ko01000,ko04147	Belongs to the LDH MDH superfamily. LDH family
AMKCACLK_01409	0.0	frdA	1.3.5.4	-	C	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	ko00000,ko00001,ko00002,ko01000	FAD binding domain
AMKCACLK_01410	0.0	fumC	4.2.1.2	-	C	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	ko00000,ko00001,ko00002,ko01000	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
AMKCACLK_01411	4.08e-47	-	-	-	-	-	-	-	-
AMKCACLK_01412	3.27e-239	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
AMKCACLK_01413	4.88e-131	metI	-	-	P	ko:K02072	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
AMKCACLK_01414	2.52e-241	metN	-	-	P	ko:K02071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AMKCACLK_01415	3.21e-208	metQ	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
AMKCACLK_01416	0.0	aha1	-	-	P	ko:K12952	-	ko00000,ko01000	E1-E2 ATPase
AMKCACLK_01417	3.85e-22	ps301	-	-	K	-	-	-	sequence-specific DNA binding
AMKCACLK_01418	2.07e-20	ps301	-	-	K	-	-	-	sequence-specific DNA binding
AMKCACLK_01419	1.35e-123	folA	1.5.1.3	-	H	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AMKCACLK_01420	9.53e-242	thyA	2.1.1.45	-	F	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	ko00000,ko00001,ko00002,ko01000	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
AMKCACLK_01421	4e-312	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
AMKCACLK_01422	2.36e-74	-	-	-	S	-	-	-	PFAM Uncharacterised protein family UPF0150
AMKCACLK_01424	1.98e-155	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
AMKCACLK_01425	2.68e-40	cbh	3.5.1.24	-	M	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	ko00000,ko00001,ko01000	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
AMKCACLK_01426	1.08e-127	-	-	-	I	-	-	-	PAP2 superfamily
AMKCACLK_01427	6.8e-169	-	-	-	S	-	-	-	Uncharacterised protein, DegV family COG1307
AMKCACLK_01428	2.03e-310	eno	4.2.1.11	-	G	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
AMKCACLK_01429	4.43e-98	-	-	-	S	-	-	-	Domain of unknown function (DUF4767)
AMKCACLK_01430	2.03e-111	yfhC	-	-	C	-	-	-	nitroreductase
AMKCACLK_01431	5.95e-14	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
AMKCACLK_01432	1.08e-102	ypbG	2.7.1.2	-	GK	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	ROK family
AMKCACLK_01433	0.0	pbg6	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
AMKCACLK_01434	1.03e-165	pts23C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AMKCACLK_01435	6.71e-78	pts23C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AMKCACLK_01437	1.76e-94	-	-	-	L	-	-	-	IS1381, transposase OrfA
AMKCACLK_01438	3.29e-161	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA
AMKCACLK_01439	1.77e-155	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
AMKCACLK_01440	1.1e-296	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
AMKCACLK_01441	1.37e-94	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
AMKCACLK_01443	1.05e-162	-	-	-	F	-	-	-	NUDIX domain
AMKCACLK_01444	0.0	nadC2	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AMKCACLK_01445	1.97e-140	pncA	-	-	Q	-	-	-	Isochorismatase family
AMKCACLK_01446	8.72e-66	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
AMKCACLK_01447	1.08e-181	glcD	1.1.3.15	-	C	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	ko00000,ko00001,ko01000	FAD linked oxidases, C-terminal domain
AMKCACLK_01448	1.13e-172	nirC	-	-	P	ko:K02598	-	ko00000,ko02000	Formate/nitrite transporter
AMKCACLK_01449	1.21e-53	-	-	-	S	-	-	-	PAS domain
AMKCACLK_01450	0.0	ade	3.5.4.2	-	F	ko:K01486	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
AMKCACLK_01451	1.07e-300	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
AMKCACLK_01452	6.03e-247	add	3.5.4.2, 3.5.4.4	-	F	ko:K01488,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko01000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AMKCACLK_01453	1.96e-203	polYB	2.7.7.7	-	L	ko:K02346,ko:K03502	-	ko00000,ko01000,ko03400	Belongs to the DNA polymerase type-Y family
AMKCACLK_01454	3.1e-158	-	-	-	K	ko:K03492	-	ko00000,ko03000	UTRA
AMKCACLK_01455	2.3e-303	pbg4	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
AMKCACLK_01456	1.08e-216	ydhF	-	-	S	-	-	-	Aldo keto reductase
AMKCACLK_01457	1.04e-220	iunH	3.2.2.1	-	F	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	inosine-uridine preferring nucleoside hydrolase
AMKCACLK_01458	9.99e-72	-	-	-	-	-	-	-	-
AMKCACLK_01459	2.56e-14	-	-	-	-	-	-	-	-
AMKCACLK_01460	8.69e-49	-	-	-	C	-	-	-	FMN_bind
AMKCACLK_01461	0.0	-	-	-	I	-	-	-	Protein of unknown function (DUF2974)
AMKCACLK_01462	4e-140	yjhB	3.6.1.13	-	F	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	NUDIX domain
AMKCACLK_01463	4.04e-265	pbpX1	-	-	V	-	-	-	Beta-lactamase
AMKCACLK_01464	1.74e-252	asd	1.2.1.11	-	E	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AMKCACLK_01465	1.74e-271	aspC	-	-	E	ko:K00841	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01007	Aminotransferase
AMKCACLK_01466	2.69e-182	dapB	1.17.1.8	-	E	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
AMKCACLK_01467	2.2e-223	dapA	4.3.3.7	-	E	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AMKCACLK_01468	1.15e-280	hipO	3.5.1.47	-	E	ko:K05823	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000,ko01002	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
AMKCACLK_01469	2.94e-108	dapH	2.3.1.117, 2.3.1.89	-	E	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
AMKCACLK_01470	0.0	lysA	4.1.1.20	-	E	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
AMKCACLK_01471	0.0	lysC	2.7.2.4	-	E	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	ko00000,ko00001,ko00002,ko01000	Belongs to the aspartokinase family
AMKCACLK_01472	2.34e-241	dapF	5.1.1.7	-	E	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
AMKCACLK_01473	0.0	potE	-	-	E	-	-	-	Amino Acid
AMKCACLK_01474	1.07e-134	engB	-	-	D	ko:K03978	-	ko00000,ko03036	Necessary for normal cell division and for the maintenance of normal septation
AMKCACLK_01475	1.1e-296	clpX	-	-	O	ko:K03544	ko04112,map04112	ko00000,ko00001,ko03110	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AMKCACLK_01476	1.85e-274	tig	-	-	D	ko:K03545	-	ko00000	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
AMKCACLK_01477	5.52e-285	tuf	-	-	J	ko:K02358,ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AMKCACLK_01478	3.27e-192	-	-	-	-	-	-	-	-
AMKCACLK_01479	0.0	rnjB	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AMKCACLK_01480	1.48e-57	rpsO	-	-	J	ko:K02956	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
AMKCACLK_01481	4.42e-47	rpsT	-	-	J	ko:K02968	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Binds directly to 16S ribosomal RNA
AMKCACLK_01482	2.46e-224	holA	2.7.7.7	-	L	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III delta subunit
AMKCACLK_01483	0.0	comEC	-	-	S	ko:K02238	-	ko00000,ko00002,ko02044	Competence protein ComEC
AMKCACLK_01484	1.63e-128	comEA	-	-	L	ko:K02237	-	ko00000,ko00002,ko02044	Competence protein ComEA
AMKCACLK_01485	7.89e-245	lon	-	-	T	ko:K07177	ko02024,map02024	ko00000,ko00001,ko01002	Belongs to the peptidase S16 family
AMKCACLK_01486	6.77e-111	coaD	2.7.7.3	-	H	ko:K00954	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
AMKCACLK_01487	2.48e-124	rsmD	2.1.1.171	-	L	ko:K08316	-	ko00000,ko01000,ko03009	RNA methyltransferase, RsmD family
AMKCACLK_01488	1.72e-71	ylbG	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2129)
AMKCACLK_01489	2.72e-263	ftsW	-	-	D	ko:K03588	ko04112,map04112	ko00000,ko00001,ko02000,ko03036	Belongs to the SEDS family
AMKCACLK_01490	0.0	typA	-	-	T	ko:K06207	-	ko00000	GTP-binding protein TypA
AMKCACLK_01491	5.41e-129	def	3.5.1.88	-	J	ko:K01462	-	ko00000,ko01000	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
AMKCACLK_01492	9e-46	ykzG	-	-	S	-	-	-	Belongs to the UPF0356 family
AMKCACLK_01493	0.0	rnjA	-	-	J	ko:K12574	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AMKCACLK_01494	7.34e-35	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
AMKCACLK_01495	1.96e-136	ytlR	-	-	I	-	-	-	Diacylglycerol kinase catalytic domain
AMKCACLK_01496	0.0	recD2	3.1.11.5	-	L	ko:K03581	ko03440,map03440	ko00000,ko00001,ko01000,ko03400	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
AMKCACLK_01497	1.24e-126	-	-	-	S	-	-	-	repeat protein
AMKCACLK_01498	3.18e-161	pgm	-	-	G	-	-	-	Phosphoglycerate mutase family
AMKCACLK_01499	1.56e-278	mnmA	2.8.1.13	-	J	ko:K00566	ko04122,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
AMKCACLK_01500	4.07e-74	XK27_04120	-	-	S	-	-	-	Putative amino acid metabolism
AMKCACLK_01501	1.33e-275	iscS	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
AMKCACLK_01502	3.97e-161	mtnN	3.2.2.9	-	E	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AMKCACLK_01503	1.28e-56	-	-	-	-	-	-	-	-
AMKCACLK_01504	6.29e-135	nudF	3.6.1.13	-	L	ko:K01515	ko00230,map00230	ko00000,ko00001,ko01000	ADP-ribose pyrophosphatase
AMKCACLK_01505	1.15e-43	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	'Cold-shock' DNA-binding domain
AMKCACLK_01506	0.0	ileS	6.1.1.5	-	J	ko:K01870	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AMKCACLK_01507	3.52e-150	divIVA	-	-	D	ko:K04074	-	ko00000,ko03036	DivIVA domain protein
AMKCACLK_01508	8.08e-192	ylmH	-	-	S	-	-	-	S4 domain protein
AMKCACLK_01509	5.07e-62	yggT	-	-	S	ko:K02221	-	ko00000,ko02044	YGGT family
AMKCACLK_01510	1.26e-95	sepF	-	-	D	ko:K09772	-	ko00000,ko03036	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
AMKCACLK_01511	1.93e-262	ftsZ	-	-	D	ko:K03531	ko04112,map04112	ko00000,ko00001,ko02048,ko03036,ko04812	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AMKCACLK_01512	4.95e-305	ftsA	-	-	D	ko:K03590	ko04112,map04112	ko00000,ko00001,ko03036,ko04812	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
AMKCACLK_01513	2.83e-181	divIB	-	-	D	ko:K03589	ko04112,map04112	ko00000,ko00001,ko03036	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
AMKCACLK_01514	2.44e-267	murG	2.4.1.227	GT28	M	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AMKCACLK_01515	0.0	murD	6.3.2.9	-	M	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AMKCACLK_01516	5.4e-225	mraY	2.7.8.13	-	M	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	ko00000,ko00001,ko01000,ko01011	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AMKCACLK_01517	0.0	pbpX	-	-	M	ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501	ko00000,ko00001,ko01000,ko01011	Penicillin-binding Protein
AMKCACLK_01518	2.2e-70	ftsL	-	-	D	-	-	-	Cell division protein FtsL
AMKCACLK_01519	3.16e-232	rsmH	2.1.1.199	-	J	ko:K03438	-	ko00000,ko01000,ko03009	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
AMKCACLK_01520	1.55e-99	mraZ	-	-	K	ko:K03925	-	ko00000	Belongs to the MraZ family
AMKCACLK_01521	8.85e-40	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMKCACLK_01522	8.42e-124	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMKCACLK_01523	4.46e-72	-	-	-	S	-	-	-	Protein of unknown function (DUF3397)
AMKCACLK_01524	1.09e-18	-	-	-	S	-	-	-	Protein of unknown function (DUF4044)
AMKCACLK_01525	2.24e-106	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
AMKCACLK_01526	1.41e-69	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
AMKCACLK_01527	1.97e-124	mreD	-	-	-	ko:K03571	-	ko00000,ko03036	-
AMKCACLK_01528	2.88e-189	mreC	-	-	M	ko:K03570	-	ko00000,ko03036	Involved in formation and maintenance of cell shape
AMKCACLK_01529	1.01e-226	mreB	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	cell shape determining protein MreB
AMKCACLK_01530	3.32e-148	radC	-	-	L	ko:K03630	-	ko00000	DNA repair protein
AMKCACLK_01531	4.33e-162	-	-	-	S	-	-	-	Haloacid dehalogenase-like hydrolase
AMKCACLK_01532	8.83e-303	folC	6.3.2.12, 6.3.2.17	-	H	ko:K11754	ko00790,ko01100,map00790,map01100	ko00000,ko00001,ko00002,ko01000	Belongs to the folylpolyglutamate synthase family
AMKCACLK_01533	0.0	valS	6.1.1.9	-	J	ko:K01873	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
AMKCACLK_01534	7.85e-125	-	-	-	-	ko:K19167	-	ko00000,ko02048	-
AMKCACLK_01535	1.13e-114	-	-	-	S	-	-	-	Bacterial membrane protein, YfhO
AMKCACLK_01536	3.17e-150	-	-	-	S	-	-	-	Bacterial membrane protein, YfhO
AMKCACLK_01537	1.54e-17	-	-	-	S	-	-	-	Bacterial membrane protein, YfhO
AMKCACLK_01538	4.4e-217	yfdH	-	GT2	M	ko:K12999,ko:K20534	-	ko00000,ko01000,ko01003,ko01005,ko02000	Glycosyltransferase like family 2
AMKCACLK_01539	8.41e-88	-	-	-	S	-	-	-	GtrA-like protein
AMKCACLK_01540	8.21e-269	-	-	-	C	-	-	-	Glycerophosphoryl diester phosphodiesterase family
AMKCACLK_01541	3.07e-32	-	-	-	-	-	-	-	-
AMKCACLK_01542	1.07e-193	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMKCACLK_01543	8.04e-228	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
AMKCACLK_01544	1.35e-94	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
AMKCACLK_01545	2.34e-60	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
AMKCACLK_01547	6.15e-156	-	-	-	-	-	-	-	-
AMKCACLK_01549	1.18e-105	-	-	-	S	-	-	-	Protein of unknown function (DUF3232)
AMKCACLK_01550	0.0	-	-	-	L	-	-	-	Transposase
AMKCACLK_01551	0.0	-	-	-	S	-	-	-	SLAP domain
AMKCACLK_01552	1.12e-168	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
AMKCACLK_01553	8.47e-164	-	-	-	-	-	-	-	-
AMKCACLK_01554	3.19e-102	-	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
AMKCACLK_01555	2.48e-162	rsuA	5.4.99.19	-	J	ko:K06183	-	ko00000,ko01000,ko03009	Belongs to the pseudouridine synthase RsuA family
AMKCACLK_01556	5.59e-182	-	-	-	K	-	-	-	Helix-turn-helix domain
AMKCACLK_01557	6.56e-293	thiI	2.8.1.4	-	H	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko03016	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AMKCACLK_01558	2.6e-278	iscS2	2.8.1.7	-	E	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	Aminotransferase class V
AMKCACLK_01559	0.0	ezrA	-	-	D	ko:K06286	-	ko00000,ko03036	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
AMKCACLK_01560	8.8e-142	rpsD	-	-	J	ko:K02986	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
AMKCACLK_01561	1.83e-106	-	-	-	S	-	-	-	Protein of unknown function (DUF1694)
AMKCACLK_01562	2.28e-307	rarA	-	-	L	ko:K07478	-	ko00000	recombination factor protein RarA
AMKCACLK_01563	4.53e-55	-	-	-	-	-	-	-	-
AMKCACLK_01564	1.91e-103	uspA	-	-	T	-	-	-	universal stress protein
AMKCACLK_01565	1.38e-274	rodA	-	-	D	ko:K05837	-	ko00000,ko03036	Belongs to the SEDS family
AMKCACLK_01566	8.85e-47	-	-	-	S	-	-	-	Protein of unknown function (DUF2969)
AMKCACLK_01567	1.31e-67	ytjA	-	-	S	ko:K08998	-	ko00000	Could be involved in insertion of integral membrane proteins into the membrane
AMKCACLK_01568	1.68e-227	mbl	-	-	D	ko:K03569	-	ko00000,ko02048,ko03036,ko04812	Cell shape determining protein MreB Mrl
AMKCACLK_01569	1.21e-40	-	-	-	S	-	-	-	Protein of unknown function (DUF1146)
AMKCACLK_01570	1.14e-90	atpC	-	-	C	ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane
AMKCACLK_01571	1.74e-316	atpD	3.6.3.14	-	C	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
AMKCACLK_01572	2.25e-216	atpG	-	-	C	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
AMKCACLK_01573	0.0	atpA	3.6.3.14	-	C	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko01000	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
AMKCACLK_01574	1.38e-121	atpH	-	-	C	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AMKCACLK_01575	9.59e-93	atpF	-	-	C	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
AMKCACLK_01576	4.83e-37	atpE	-	-	C	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AMKCACLK_01577	4.82e-165	atpB	-	-	C	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	ko00000,ko00001,ko00002,ko00194,ko03110	it plays a direct role in the translocation of protons across the membrane
AMKCACLK_01578	2.15e-145	upp	2.4.2.9	-	F	ko:K00761	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
AMKCACLK_01579	8.82e-241	ywlC	2.7.7.87	-	J	ko:K07566	-	ko00000,ko01000,ko03009,ko03016	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
AMKCACLK_01580	2.42e-200	prmC	2.1.1.297	-	J	ko:K02493	-	ko00000,ko01000,ko03012	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
AMKCACLK_01581	7.36e-234	prfA	-	-	J	ko:K02835	-	ko00000,ko03012	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
AMKCACLK_01582	4.94e-146	tdk	2.7.1.21	-	F	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	thymidine kinase
AMKCACLK_01583	0.0	murE2	6.3.2.13	-	M	ko:K01928	ko00300,ko00550,map00300,map00550	ko00000,ko00001,ko01000,ko01011	Domain of unknown function (DUF1727)
AMKCACLK_01586	6.05e-250	ampC	-	-	V	-	-	-	Beta-lactamase
AMKCACLK_01587	6.16e-51	-	-	-	EGP	-	-	-	Major Facilitator
AMKCACLK_01588	5.53e-195	-	-	-	EGP	-	-	-	Major Facilitator
AMKCACLK_01589	5.87e-294	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_01590	2.7e-278	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
AMKCACLK_01591	0.0	pgi	5.3.1.9	-	G	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the GPI family
AMKCACLK_01592	4.52e-140	vanZ	-	-	V	-	-	-	VanZ like family
AMKCACLK_01593	0.0	ltaS	2.7.8.20	-	M	ko:K19005	ko00561,ko01100,map00561,map01100	ko00000,ko00001,ko01000	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
AMKCACLK_01594	0.0	yclK	-	-	T	-	-	-	Histidine kinase
AMKCACLK_01595	4.46e-167	-	-	-	K	-	-	-	Transcriptional regulatory protein, C terminal
AMKCACLK_01596	8.14e-80	-	-	-	S	-	-	-	SdpI/YhfL protein family
AMKCACLK_01597	3.23e-221	manA	5.3.1.8	-	G	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	mannose-6-phosphate isomerase
AMKCACLK_01598	4.03e-286	patB	4.4.1.8	-	E	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko01000,ko01007	Aminotransferase, class I
AMKCACLK_01599	5.04e-48	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
AMKCACLK_01600	1.38e-51	-	-	-	M	-	-	-	Protein of unknown function (DUF3737)
AMKCACLK_01602	3.19e-283	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AMKCACLK_01603	1.46e-239	ytxK	2.1.1.72	-	L	ko:K00571	-	ko00000,ko01000,ko02048	N-6 DNA Methylase
AMKCACLK_01604	5.97e-106	-	-	-	U	ko:K02248	-	ko00000,ko00002,ko02044	Putative Competence protein ComGF
AMKCACLK_01605	1.18e-55	-	-	-	-	-	-	-	-
AMKCACLK_01606	2.04e-95	-	-	-	-	ko:K02246	-	ko00000,ko00002,ko02044	-
AMKCACLK_01607	6.15e-66	comGC	-	-	U	ko:K02245	-	ko00000,ko00002,ko02044	competence protein ComGC
AMKCACLK_01608	1.33e-114	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
AMKCACLK_01609	1.16e-85	comGB	-	-	NU	ko:K02244	-	ko00000,ko00002,ko02044	type II secretion system
AMKCACLK_01610	2.29e-227	comGA	-	-	NU	ko:K02243	-	ko00000,ko00002,ko02044	Type II IV secretion system protein
AMKCACLK_01611	3.98e-171	yebC	-	-	K	-	-	-	Transcriptional regulatory protein
AMKCACLK_01612	5.73e-120	-	-	-	S	-	-	-	VanZ like family
AMKCACLK_01613	5.56e-49	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_01614	3.87e-220	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_01615	0.0	-	-	-	E	-	-	-	Amino acid permease
AMKCACLK_01616	2.41e-235	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
AMKCACLK_01617	0.0	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
AMKCACLK_01618	1.23e-27	-	3.2.1.86	GT1	G	ko:K01223	ko00010,ko00500,map00010,map00500	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 1 family
AMKCACLK_01619	0.0	pts33BCA	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
AMKCACLK_01620	5.13e-209	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMKCACLK_01621	6.28e-110	pts33BCA	-	-	G	ko:K02755,ko:K02756,ko:K02757	ko02060,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
AMKCACLK_01622	1.16e-184	bglG5	-	-	K	ko:K03488	-	ko00000,ko03000	CAT RNA binding domain
AMKCACLK_01623	5.85e-274	glxK	2.7.1.165	-	G	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130	ko00000,ko00001,ko01000	Belongs to the glycerate kinase type-1 family
AMKCACLK_01624	2.06e-112	ptpA	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AMKCACLK_01625	8.81e-152	-	-	-	-	-	-	-	-
AMKCACLK_01626	6.89e-191	-	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
AMKCACLK_01627	1.69e-191	-	-	-	S	-	-	-	hydrolase
AMKCACLK_01628	0.0	glmM	5.4.2.10	-	G	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	ko00000,ko00001,ko01000	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AMKCACLK_01629	2.62e-218	ybbR	-	-	S	-	-	-	YbbR-like protein
AMKCACLK_01630	8.69e-194	dacA	2.7.7.85	-	S	ko:K18672	-	ko00000,ko01000	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
AMKCACLK_01631	1.71e-266	potD	-	-	P	ko:K11069	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
AMKCACLK_01632	3.23e-180	potC	-	-	P	ko:K11070	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
AMKCACLK_01633	1.85e-174	potB	-	-	P	ko:K11071	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
AMKCACLK_01634	4.51e-262	potA	3.6.3.30, 3.6.3.31	-	P	ko:K02010,ko:K11072	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
AMKCACLK_01635	1.47e-210	murB	1.3.1.98	-	M	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Cell wall formation
AMKCACLK_01636	7.47e-128	dnaQ	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	DNA polymerase III
AMKCACLK_01637	1.87e-118	ydiB	-	-	O	ko:K06925	-	ko00000,ko03016	Hydrolase, P-loop family
AMKCACLK_01638	3.84e-233	pta	2.3.1.8, 3.6.3.21	-	C	ko:K00625,ko:K02028	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000,ko02000	phosphate acetyltransferase
AMKCACLK_01639	2.33e-174	ung	3.2.2.27	-	L	ko:K03648	ko03410,ko05340,map03410,map05340	ko00000,ko00001,ko01000,ko03400	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
AMKCACLK_01640	4.17e-203	ycsE	-	-	S	-	-	-	Sucrose-6F-phosphate phosphohydrolase
AMKCACLK_01641	3.58e-124	-	-	-	-	-	-	-	-
AMKCACLK_01642	6.64e-184	tpiA	5.3.1.1	-	G	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
AMKCACLK_01643	6.01e-288	pgk	2.7.2.3	-	F	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the phosphoglycerate kinase family
AMKCACLK_01644	1.65e-243	gap	1.2.1.12	-	G	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
AMKCACLK_01645	6.71e-241	cggR	-	-	K	ko:K05311	-	ko00000,ko03000	Putative sugar-binding domain
AMKCACLK_01647	1.73e-96	-	-	-	-	-	-	-	-
AMKCACLK_01648	2.08e-115	-	-	-	-	-	-	-	-
AMKCACLK_01649	2.69e-40	-	-	-	-	-	-	-	-
AMKCACLK_01650	0.0	ycaM	-	-	E	-	-	-	amino acid
AMKCACLK_01651	5.08e-170	supH	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
AMKCACLK_01652	0.0	-	-	-	S	-	-	-	SH3-like domain
AMKCACLK_01653	2.24e-282	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMKCACLK_01654	1.16e-128	clpP	3.4.21.92	-	O	ko:K01358	ko04112,ko04212,map04112,map04212	ko00000,ko00001,ko01000,ko01002	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
AMKCACLK_01655	1.1e-296	-	-	-	L	ko:K07497	-	ko00000	COG2963 Transposase and inactivated derivatives
AMKCACLK_01656	8.23e-219	whiA	-	-	K	ko:K09762	-	ko00000	May be required for sporulation
AMKCACLK_01657	1.27e-247	yvcK	-	-	S	-	-	-	Required for morphogenesis under gluconeogenic growth conditions
AMKCACLK_01658	6e-211	yvcJ	-	-	S	ko:K06958	-	ko00000,ko03019	Displays ATPase and GTPase activities
AMKCACLK_01659	2.64e-109	-	-	-	S	-	-	-	Short repeat of unknown function (DUF308)
AMKCACLK_01660	0.0	uvrA	-	-	L	ko:K03701	ko03420,map03420	ko00000,ko00001,ko03400	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
AMKCACLK_01661	0.0	uvrB	-	-	L	ko:K03702	ko03420,map03420	ko00000,ko00001,ko03400	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
AMKCACLK_01662	0.0	pgm	5.4.2.2	-	G	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	ko00000,ko00001,ko00002,ko01000	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
AMKCACLK_01663	0.0	malZ	3.2.1.20, 3.2.1.41	CBM48,GH13,GH31	G	ko:K01187,ko:K01200	ko00052,ko00500,ko01100,ko01110,map00052,map00500,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
AMKCACLK_01664	0.0	glgP	2.4.1.1	GT35	G	ko:K00688	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	ko00000,ko00001,ko01000	Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
AMKCACLK_01665	0.0	glgA	2.4.1.21	GT5	F	ko:K00703	ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000,ko01003	Synthesizes alpha-1,4-glucan chains using ADP-glucose
AMKCACLK_01666	7.41e-276	glgD	2.7.7.27	-	G	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000	Nucleotidyl transferase
AMKCACLK_01667	5.78e-268	glgC	2.7.7.27	-	H	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	ko00000,ko00001,ko00002,ko01000	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AMKCACLK_01668	0.0	glgB	2.4.1.18	CBM48,GH13	G	ko:K00700	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
AMKCACLK_01669	7.09e-141	glgB	2.4.1.18	CBM48,GH13	G	ko:K00700	ko00500,ko01100,ko01110,map00500,map01100,map01110	ko00000,ko00001,ko00002,ko01000,ko04147	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
AMKCACLK_01670	3.63e-288	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_01671	2.7e-278	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
AMKCACLK_01672	3.46e-241	gpsA	1.1.1.94	-	I	ko:K00057	ko00564,ko01110,map00564,map01110	ko00000,ko00001,ko01000	Glycerol-3-phosphate dehydrogenase
AMKCACLK_01673	3.9e-191	lgt	-	-	M	ko:K13292	-	ko00000,ko01000	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
AMKCACLK_01674	1.44e-229	hprK	-	-	F	ko:K06023	-	ko00000,ko01000	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
AMKCACLK_01675	9.21e-50	-	-	-	-	-	-	-	-
AMKCACLK_01676	2.93e-236	prfB	-	-	J	ko:K02836	-	ko00000,ko03012	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AMKCACLK_01677	0.0	secA	-	-	U	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
AMKCACLK_01678	3.81e-123	hpf	-	-	J	ko:K05808	-	ko00000,ko03009	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AMKCACLK_01679	4.17e-172	comFC	-	-	S	ko:K02242	-	ko00000,ko00002,ko02044	Competence protein
AMKCACLK_01680	1.01e-310	comFA	-	-	L	ko:K02240	-	ko00000,ko00002,ko02044	Helicase C-terminal domain protein
AMKCACLK_01681	2.4e-152	yvyE	3.4.13.9	-	S	ko:K01271	-	ko00000,ko01000,ko01002	YigZ family
AMKCACLK_01682	3.21e-267	tagO	2.7.8.33, 2.7.8.35	-	M	ko:K02851	-	ko00000,ko01000,ko01003,ko01005	transferase
AMKCACLK_01683	1.75e-285	rny	-	-	S	ko:K18682	ko03018,map03018	ko00000,ko00001,ko01000,ko03019	Endoribonuclease that initiates mRNA decay
AMKCACLK_01684	8.88e-248	recA	-	-	L	ko:K03553	ko03440,map03440	ko00000,ko00001,ko00002,ko03400	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
AMKCACLK_01685	3e-127	pgsA	2.7.8.5	-	I	ko:K00995	ko00564,ko01100,map00564,map01100	ko00000,ko00001,ko01000	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AMKCACLK_01686	1.33e-186	ymfM	-	-	S	ko:K15539	-	ko00000	Helix-turn-helix domain
AMKCACLK_01687	1.14e-170	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl-(Acyl carrier protein) reductase
AMKCACLK_01688	6.17e-300	ymfH	-	-	S	-	-	-	Peptidase M16
AMKCACLK_01689	2.34e-288	ymfF	-	-	S	-	-	-	Peptidase M16 inactive domain protein
AMKCACLK_01690	0.0	ftsK	-	-	D	ko:K03466	-	ko00000,ko03036	Belongs to the FtsK SpoIIIE SftA family
AMKCACLK_01691	4.46e-90	WQ51_03320	-	-	S	-	-	-	Protein of unknown function (DUF1149)
AMKCACLK_01692	1.23e-135	cspR	2.1.1.207	-	J	ko:K03216	-	ko00000,ko01000,ko03016	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
AMKCACLK_01693	8.55e-270	XK27_05220	-	-	S	-	-	-	AI-2E family transporter
AMKCACLK_01694	1.35e-85	srlB	2.7.1.198	-	G	ko:K02781	ko00051,ko02060,map00051,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system glucitol/sorbitol-specific IIA component
AMKCACLK_01695	0.0	pacL	-	-	P	-	-	-	Cation transporter/ATPase, N-terminus
AMKCACLK_01696	1.75e-256	pgl	3.1.1.31	-	G	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Lactonase, 7-bladed beta-propeller
AMKCACLK_01697	6.52e-59	-	-	-	S	-	-	-	SNARE associated Golgi protein
AMKCACLK_01698	5.71e-38	-	-	-	S	-	-	-	SNARE associated Golgi protein
AMKCACLK_01699	0.0	mycA	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
AMKCACLK_01700	4.97e-218	rluD2	5.4.99.23	-	J	ko:K06180	-	ko00000,ko01000,ko03009	Responsible for synthesis of pseudouridine from uracil
AMKCACLK_01701	4.35e-198	nadK	2.7.1.23	-	F	ko:K00858	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AMKCACLK_01702	1.15e-145	yjbM	2.7.6.5	-	S	ko:K07816	ko00230,map00230	ko00000,ko00001,ko01000	RelA SpoT domain protein
AMKCACLK_01703	8.48e-145	-	-	-	S	-	-	-	CYTH
AMKCACLK_01704	5.3e-144	yjbH	-	-	Q	-	-	-	Thioredoxin
AMKCACLK_01705	2.18e-203	coiA	-	-	S	ko:K06198	-	ko00000	Competence protein
AMKCACLK_01706	3.26e-172	mecA	-	-	NOT	ko:K16511	-	ko00000	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
AMKCACLK_01707	1.08e-87	spxA	-	-	K	ko:K16509	-	ko00000	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
AMKCACLK_01708	0.0	ptsI	2.7.3.9	-	G	ko:K08483	ko02060,map02060	ko00000,ko00001,ko01000,ko02000	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AMKCACLK_01709	1.29e-54	ptsH	-	-	G	ko:K11189	-	ko00000,ko02000	phosphocarrier protein HPR
AMKCACLK_01710	5.25e-37	-	-	-	-	-	-	-	-
AMKCACLK_01711	0.0	clpE	-	-	O	ko:K03697	-	ko00000,ko03110	Belongs to the ClpA ClpB family
AMKCACLK_01712	4.17e-60	XK27_09445	-	-	S	-	-	-	Domain of unknown function (DUF1827)
AMKCACLK_01713	0.0	prfC	-	-	J	ko:K02837	-	ko00000,ko03012	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
AMKCACLK_01714	1.2e-205	hlyX	-	-	S	ko:K03699	-	ko00000,ko02042	Transporter associated domain
AMKCACLK_01715	2.6e-96	-	-	-	-	-	-	-	-
AMKCACLK_01716	1.05e-112	-	-	-	-	-	-	-	-
AMKCACLK_01717	2.89e-185	recX	-	-	S	ko:K03565	-	ko00000,ko03400	Regulatory protein RecX
AMKCACLK_01718	0.0	rumA_1	2.1.1.190, 2.1.1.35	-	J	ko:K00557,ko:K03215	-	ko00000,ko01000,ko03009,ko03016	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AMKCACLK_01719	2.06e-127	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
AMKCACLK_01723	8.87e-289	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMKCACLK_01724	0.0	-	-	-	L	ko:K07484	-	ko00000	Transposase IS66 family
AMKCACLK_01725	1.3e-44	-	-	-	S	-	-	-	Transposase C of IS166 homeodomain
AMKCACLK_01726	6.93e-85	-	-	-	L	ko:K07484	-	ko00000	IS66 Orf2 like protein
AMKCACLK_01727	2.94e-240	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
AMKCACLK_01728	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
AMKCACLK_01729	0.0	-	-	-	H	-	-	-	ThiF family
AMKCACLK_01730	0.0	yjcA	-	-	S	ko:K19350	ko02010,map02010	ko00000,ko00001,ko01504,ko02000	ABC transporter
AMKCACLK_01731	6.24e-289	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMKCACLK_01732	1.13e-90	-	-	-	KLT	-	-	-	Protein kinase domain
AMKCACLK_01733	9.43e-123	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMKCACLK_01734	7.53e-24	ybcH	-	-	D	ko:K06889	-	ko00000	Alpha beta
AMKCACLK_01735	1.9e-61	-	-	-	-	-	-	-	-
AMKCACLK_01736	5.43e-276	mvaS	2.3.3.10	-	I	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Hydroxymethylglutaryl-CoA synthase
AMKCACLK_01737	1.09e-274	mvaA	1.1.1.88, 2.3.1.9	-	C	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the HMG-CoA reductase family
AMKCACLK_01738	2.04e-275	atoB	1.1.1.88, 2.3.1.9	-	I	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	ko00000,ko00001,ko00002,ko01000,ko04147	Belongs to the thiolase family
AMKCACLK_01739	2.09e-92	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_01740	1.93e-123	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_01741	4.98e-20	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_01742	2.01e-213	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
AMKCACLK_01743	7.94e-199	rbn	-	-	S	ko:K07058	-	ko00000	Belongs to the UPF0761 family
AMKCACLK_01744	9.98e-211	map	3.4.11.18	-	E	ko:K01265	-	ko00000,ko01000,ko01002	Methionine Aminopeptidase
AMKCACLK_01745	3.48e-103	ykuP	-	-	C	ko:K03839	-	ko00000	Flavodoxin
AMKCACLK_01746	5.57e-114	gtcA1	-	-	S	-	-	-	Teichoic acid glycosylation protein
AMKCACLK_01747	9.39e-278	mnaA	5.1.3.14	-	G	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	ko00000,ko00001,ko00002,ko01000,ko01005	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
AMKCACLK_01748	5.82e-35	-	-	-	-	-	-	-	-
AMKCACLK_01750	2.31e-314	chbC	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AMKCACLK_01751	6.71e-268	yfmL	-	-	L	-	-	-	DEAD DEAH box helicase
AMKCACLK_01752	4.29e-162	lys	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
AMKCACLK_01753	1.18e-273	-	-	-	E	ko:K03294	-	ko00000	amino acid
AMKCACLK_01754	6.05e-133	hpt	2.4.2.8	-	F	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	ko00000,ko00001,ko01000	Belongs to the purine pyrimidine phosphoribosyltransferase family
AMKCACLK_01755	1.91e-314	yhdP	-	-	S	-	-	-	Transporter associated domain
AMKCACLK_01756	1.31e-39	-	-	-	C	-	-	-	nitroreductase
AMKCACLK_01757	3.42e-19	-	-	-	C	-	-	-	nitroreductase
AMKCACLK_01758	3.51e-53	-	-	-	-	-	-	-	-
AMKCACLK_01759	6.56e-112	ptbA	2.7.1.208	-	G	ko:K02755,ko:K02777,ko:K20107,ko:K20108	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
AMKCACLK_01760	1.5e-94	-	-	-	-	-	-	-	-
AMKCACLK_01761	5.32e-176	glvR	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
AMKCACLK_01762	0.0	glvC	2.7.1.208	-	G	ko:K02749,ko:K02750	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system, EIIB
AMKCACLK_01763	2.23e-110	-	-	-	S	-	-	-	hydrolase
AMKCACLK_01764	2.65e-18	-	2.7.13.3	-	T	ko:K07706	ko02020,ko02024,map02020,map02024	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	GHKL domain
AMKCACLK_01765	3.74e-205	-	-	-	S	-	-	-	Phospholipase, patatin family
AMKCACLK_01766	0.0	xfp	4.1.2.22, 4.1.2.9	-	G	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	ko00000,ko00001,ko01000	Phosphoketolase
AMKCACLK_01767	1.17e-169	-	-	-	K	ko:K22103	-	ko00000,ko03000	DeoR C terminal sensor domain
AMKCACLK_01768	4.25e-82	-	-	-	S	-	-	-	Enterocin A Immunity
AMKCACLK_01769	8.76e-73	yitW	-	-	S	-	-	-	Iron-sulfur cluster assembly protein
AMKCACLK_01770	0.0	sufB	-	-	O	ko:K07033,ko:K09014	-	ko00000	assembly protein SufB
AMKCACLK_01771	5.28e-105	nifU	-	-	C	ko:K04488	-	ko00000	SUF system FeS assembly protein, NifU family
AMKCACLK_01772	7.78e-300	sufS	2.8.1.7, 4.4.1.16	-	E	ko:K11717	ko00450,ko01100,map00450,map01100	ko00000,ko00001,ko01000	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AMKCACLK_01773	5.29e-300	sufD	-	-	O	ko:K07033,ko:K09015	-	ko00000	FeS assembly protein SufD
AMKCACLK_01774	2.13e-186	sufC	-	-	O	ko:K09013	-	ko00000,ko02000	FeS assembly ATPase SufC
AMKCACLK_01775	6.17e-124	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMKCACLK_01776	4.18e-197	-	3.1.3.102, 3.1.3.104	-	S	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	ko00000,ko00001,ko00002,ko01000	hydrolase
AMKCACLK_01777	7.3e-82	-	2.3.1.81	-	V	ko:K00662	-	ko00000,ko01000,ko01504	Aminoglycoside 3-N-acetyltransferase
AMKCACLK_01778	1.7e-78	-	2.3.1.81	-	V	ko:K00662	-	ko00000,ko01000,ko01504	Aminoglycoside 3-N-acetyltransferase
AMKCACLK_01780	1.5e-170	gntR	-	-	K	-	-	-	UbiC transcription regulator-associated domain protein
AMKCACLK_01781	3.01e-224	rihC	3.2.2.1	-	F	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100	ko00000,ko00001,ko01000	Nucleoside
AMKCACLK_01782	0.0	kup	-	-	P	ko:K03549	-	ko00000,ko02000	Transport of potassium into the cell
AMKCACLK_01783	3.83e-163	rpiA	5.3.1.6	-	G	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
AMKCACLK_01784	8.52e-215	rbsK	2.7.1.15	-	H	ko:K00852	ko00030,map00030	ko00000,ko00001,ko01000	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AMKCACLK_01785	9.95e-207	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
AMKCACLK_01786	2.37e-307	srrA1	-	-	G	ko:K02027,ko:K17244	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
AMKCACLK_01787	1.77e-72	-	-	-	S	-	-	-	Bacteriocin helveticin-J
AMKCACLK_01788	5.13e-209	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMKCACLK_01789	2.62e-142	-	-	-	S	-	-	-	SLAP domain
AMKCACLK_01790	1.2e-166	-	-	-	K	-	-	-	sequence-specific DNA binding
AMKCACLK_01791	3.78e-25	-	-	-	S	-	-	-	Protein of unknown function (DUF2974)
AMKCACLK_01792	1.7e-143	-	-	-	S	-	-	-	Protein of unknown function (DUF2974)
AMKCACLK_01793	1.66e-137	glnP	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
AMKCACLK_01794	3.66e-139	glnM	-	-	P	ko:K10040	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
AMKCACLK_01795	1.1e-192	glnH	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter substrate-binding protein
AMKCACLK_01796	8.97e-170	glnQ	-	-	E	ko:K10041	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter, ATP-binding protein
AMKCACLK_01797	4.19e-92	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_01798	1.93e-123	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_01799	1.3e-20	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_01800	7.79e-112	-	-	-	L	ko:K07491	-	ko00000	Transposase IS200 like
AMKCACLK_01801	3.1e-24	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Zeta toxin
AMKCACLK_01802	1.17e-105	udk	2.7.1.48	-	F	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100	ko00000,ko00001,ko01000	Zeta toxin
AMKCACLK_01803	6.26e-79	-	-	-	EGP	-	-	-	Major facilitator superfamily
AMKCACLK_01804	5.28e-118	-	-	-	EGP	-	-	-	Major facilitator superfamily
AMKCACLK_01805	1.47e-130	ykoE	-	-	S	ko:K16925	-	ko00000,ko00002,ko02000	ABC-type cobalt transport system, permease component
AMKCACLK_01806	0.0	XK27_09605	-	-	V	ko:K18892	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter transmembrane region
AMKCACLK_01807	0.0	XK27_09600	-	-	V	ko:K06147,ko:K18891	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter, ATP-binding protein
AMKCACLK_01808	1.03e-103	-	-	-	K	-	-	-	Transcriptional regulator, MarR family
AMKCACLK_01809	1.75e-189	peb1A	-	-	ET	ko:K10039	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter
AMKCACLK_01810	6.43e-167	-	-	-	F	-	-	-	glutamine amidotransferase
AMKCACLK_01811	3.05e-190	-	-	-	-	-	-	-	-
AMKCACLK_01812	0.0	ykpA	-	-	S	-	-	-	ABC transporter, ATP-binding protein
AMKCACLK_01813	2.17e-266	pepA	-	-	E	-	-	-	M42 glutamyl aminopeptidase
AMKCACLK_01814	1.17e-40	pmrA	-	-	EGP	ko:K08161	-	ko00000,ko02000	MFS_1 like family
AMKCACLK_01815	8.93e-213	pmrA	-	-	EGP	ko:K08161	-	ko00000,ko02000	MFS_1 like family
AMKCACLK_01816	0.0	qacA	-	-	EGP	-	-	-	Major Facilitator
AMKCACLK_01817	4.47e-115	pyrR	2.4.2.9	-	F	ko:K02825	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000,ko03000	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
AMKCACLK_01818	9.78e-216	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
AMKCACLK_01819	4.07e-48	pyrP	-	-	F	ko:K02824	-	ko00000,ko02000	Permease
AMKCACLK_01820	1.19e-197	-	1.1.1.346	-	S	ko:K06221	-	ko00000,ko01000	reductase
AMKCACLK_01821	5.59e-39	-	2.7.1.191	-	G	ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphoenolpyruvate-dependent sugar phosphotransferase system
AMKCACLK_01822	1.01e-99	-	2.7.1.191	-	G	ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
AMKCACLK_01823	1.1e-93	-	-	-	G	ko:K02795	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sorbose-specific iic component
AMKCACLK_01824	3.8e-60	-	-	-	G	ko:K02795	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system sorbose-specific iic component
AMKCACLK_01825	7.63e-184	-	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system mannose/fructose/sorbose family IID component
AMKCACLK_01826	1.76e-109	-	-	-	K	-	-	-	acetyltransferase
AMKCACLK_01827	7.9e-191	-	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	MCRA family
AMKCACLK_01828	1.67e-208	-	4.2.1.53	-	S	ko:K10254	-	ko00000,ko01000	Myosin-crossreactive antigen
AMKCACLK_01829	1.85e-120	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
AMKCACLK_01830	8.69e-315	qacA	-	-	EGP	-	-	-	Major Facilitator
AMKCACLK_01834	1.04e-124	-	-	-	K	-	-	-	Acetyltransferase (GNAT) domain
AMKCACLK_01835	6.69e-81	-	-	-	-	-	-	-	-
AMKCACLK_01836	6.67e-144	-	-	-	L	-	-	-	helicase activity
AMKCACLK_01839	9.99e-40	cspA	-	-	K	ko:K03704	-	ko00000,ko03000	Cold shock protein
AMKCACLK_01840	2.92e-311	tnp2	-	-	L	-	-	-	PFAM Transposase, IS204 IS1001 IS1096 IS1165
AMKCACLK_01841	3.49e-220	-	-	-	L	ko:K07482	-	ko00000	PFAM Integrase, catalytic core
AMKCACLK_01842	1.43e-117	ydhK	-	-	M	-	-	-	Protein of unknown function (DUF1541)
AMKCACLK_01843	1.01e-51	pspC	-	-	KT	ko:K03973	-	ko00000,ko02048,ko03000	PspC domain protein
AMKCACLK_01844	1.15e-47	XK27_06915	-	-	K	ko:K10947	-	ko00000,ko03000	transcriptional regulator PadR family
AMKCACLK_01845	1.16e-20	XK27_06915	-	-	K	ko:K10947	-	ko00000,ko03000	transcriptional regulator PadR family
AMKCACLK_01847	1.26e-85	-	-	-	L	-	-	-	Transposase and inactivated derivatives IS30 family
AMKCACLK_01848	0.0	rumA_2	2.1.1.190	-	J	ko:K03215	-	ko00000,ko01000,ko03009	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AMKCACLK_01849	1.63e-313	nhaC	-	-	C	ko:K03315	-	ko00000,ko02000	Na H antiporter NhaC
AMKCACLK_01850	9.6e-73	-	-	-	-	-	-	-	-
AMKCACLK_01851	2.1e-153	ybhL	-	-	S	ko:K06890	-	ko00000	Belongs to the BI1 family
AMKCACLK_01852	5.53e-147	ybbB	-	-	S	-	-	-	Protein of unknown function (DUF1211)
AMKCACLK_01853	2.65e-217	dagK	2.7.1.107	-	G	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	ko00000,ko00001,ko01000	Lipid kinase
AMKCACLK_01854	0.0	gatB	6.3.5.6, 6.3.5.7	-	J	ko:K02434	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AMKCACLK_01855	0.0	gatA	6.3.5.6, 6.3.5.7	-	J	ko:K02433	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
AMKCACLK_01856	2.94e-66	gatC	6.3.5.6, 6.3.5.7	-	J	ko:K02435	ko00970,ko01100,map00970,map01100	ko00000,ko00001,ko01000,ko03029	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AMKCACLK_01857	5.99e-266	camS	-	-	S	-	-	-	sex pheromone
AMKCACLK_01858	0.0	ligA	6.5.1.2	-	L	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	ko00000,ko00001,ko01000,ko03032,ko03400	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AMKCACLK_01859	0.0	pcrA	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	ATP-dependent DNA helicase
AMKCACLK_01860	3.4e-145	acmA	3.2.1.17, 3.2.1.96	-	NU	ko:K01185,ko:K01227	ko00511,map00511	ko00000,ko00001,ko01000	mannosyl-glycoprotein
AMKCACLK_01862	1.34e-113	ydcK	-	-	S	ko:K03095	-	ko00000	Belongs to the SprT family
AMKCACLK_01863	4.89e-176	-	-	-	M	-	-	-	Glycosyltransferase sugar-binding region containing DXD motif
AMKCACLK_01864	0.0	epsU	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
AMKCACLK_01865	2.11e-286	-	-	-	M	-	-	-	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
AMKCACLK_01866	0.0	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
AMKCACLK_01867	5.7e-68	pacL	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
AMKCACLK_01868	3.38e-274	-	-	-	L	-	-	-	Probable transposase
AMKCACLK_01869	3.3e-196	nadE	6.3.1.5	-	F	ko:K01916	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
AMKCACLK_01870	0.0	pncB	6.3.4.21	-	F	ko:K00763	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko01000	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AMKCACLK_01871	1.64e-262	-	-	-	M	-	-	-	Glycosyl transferases group 1
AMKCACLK_01872	1.69e-172	tagA	2.4.1.187	GT26	F	ko:K05946	ko05111,map05111	ko00000,ko00001,ko01000,ko01003	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
AMKCACLK_01873	1.77e-15	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_01874	1.61e-254	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_01875	4.14e-81	tagD	2.7.7.39	-	IM	ko:K00980	ko00564,map00564	ko00000,ko00001,ko01000	Glycerol-3-phosphate cytidylyltransferase
AMKCACLK_01876	8.97e-159	gntR1	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
AMKCACLK_01877	2.88e-272	-	-	-	-	-	-	-	-
AMKCACLK_01880	7.06e-120	-	-	-	-	-	-	-	-
AMKCACLK_01881	0.0	slpX	-	-	S	-	-	-	SLAP domain
AMKCACLK_01882	3.16e-145	pfoSR	-	-	S	ko:K07035	-	ko00000	Phosphotransferase system, EIIC
AMKCACLK_01883	4.12e-24	pfoSR	-	-	S	ko:K07035	-	ko00000	Phosphotransferase system, EIIC
AMKCACLK_01885	1.41e-69	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
AMKCACLK_01886	1.83e-105	-	-	-	L	-	-	-	COG2826 Transposase and inactivated derivatives, IS30 family
AMKCACLK_01887	1.46e-170	glpQ1	3.1.4.46	-	C	ko:K01126	ko00564,map00564	ko00000,ko00001,ko01000	glycerophosphoryl diester phosphodiesterase
AMKCACLK_01888	1.8e-290	-	-	-	G	-	-	-	Antibiotic biosynthesis monooxygenase
AMKCACLK_01889	3.24e-143	-	-	-	G	-	-	-	Phosphoglycerate mutase family
AMKCACLK_01890	6.81e-250	-	-	-	D	-	-	-	nuclear chromosome segregation
AMKCACLK_01891	3.08e-121	-	-	-	M	-	-	-	LysM domain protein
AMKCACLK_01892	5.26e-19	-	-	-	-	-	-	-	-
AMKCACLK_01893	5.1e-33	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase
AMKCACLK_01894	1.28e-120	pphA	3.1.3.16	-	T	ko:K07313	-	ko00000,ko01000	Calcineurin-like phosphoesterase
AMKCACLK_01895	4.63e-88	-	-	-	-	-	-	-	-
AMKCACLK_01896	1.52e-43	-	-	-	-	-	-	-	-
AMKCACLK_01897	4.09e-92	-	-	-	S	-	-	-	Iron-sulphur cluster biosynthesis
AMKCACLK_01898	9.44e-77	-	-	-	K	-	-	-	Helix-turn-helix domain, rpiR family
AMKCACLK_01899	9.96e-291	nagA	3.5.1.25	-	G	ko:K01443	ko00520,ko01130,map00520,map01130	ko00000,ko00001,ko01000	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AMKCACLK_01900	1.96e-164	-	-	-	K	ko:K03710	-	ko00000,ko03000	UTRA
AMKCACLK_01902	5.47e-30	-	-	-	C	-	-	-	FAD binding domain
AMKCACLK_01903	3.66e-35	-	-	-	C	-	-	-	FAD binding domain
AMKCACLK_01904	5.84e-32	-	-	-	C	-	-	-	FAD binding domain
AMKCACLK_01905	5.65e-60	-	-	-	C	-	-	-	FAD binding domain
AMKCACLK_01906	4.9e-11	-	-	-	K	-	-	-	Bacterial regulatory helix-turn-helix protein, lysR family
AMKCACLK_01907	1.98e-179	-	-	-	S	-	-	-	Uncharacterized protein conserved in bacteria (DUF2263)
AMKCACLK_01908	3.9e-79	-	-	-	-	-	-	-	-
AMKCACLK_01909	0.0	-	-	-	L	ko:K03724	-	ko00000,ko01000,ko03400	DEAD DEAH box helicase
AMKCACLK_01910	0.0	-	-	-	P	-	-	-	P-loop Domain of unknown function (DUF2791)
AMKCACLK_01911	0.0	-	-	-	S	-	-	-	TerB-C domain
AMKCACLK_01912	0.0	pckA	4.1.1.49	-	H	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Phosphoenolpyruvate carboxykinase
AMKCACLK_01913	7.52e-95	apfA	3.6.1.61	-	F	ko:K18445	ko00230,map00230	ko00000,ko00001,ko01000	Nudix hydrolase
AMKCACLK_01914	1.85e-48	-	-	-	-	-	-	-	-
AMKCACLK_01915	5.67e-176	-	4.1.1.44	-	S	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	ko00000,ko00001,ko01000	Carboxymuconolactone decarboxylase family
AMKCACLK_01916	5.51e-284	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AMKCACLK_01917	2.61e-124	-	-	-	S	-	-	-	LPXTG cell wall anchor motif
AMKCACLK_01918	1.57e-94	-	-	-	-	-	-	-	-
AMKCACLK_01919	4.01e-134	-	-	-	E	-	-	-	amino acid
AMKCACLK_01920	7.04e-63	-	-	-	-	-	-	-	-
AMKCACLK_01921	0.0	glmS	2.6.1.16	-	M	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	ko00000,ko00001,ko01000,ko01002	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
AMKCACLK_01922	0.0	adhE	1.1.1.1, 1.2.1.10	-	C	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220	ko00000,ko00001,ko01000	belongs to the iron- containing alcohol dehydrogenase family
AMKCACLK_01923	8.91e-306	cycA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
AMKCACLK_01924	3.09e-107	-	2.3.1.79	-	S	ko:K00661	-	ko00000,ko01000	transferase hexapeptide repeat
AMKCACLK_01925	4.77e-29	-	-	-	K	-	-	-	Transcriptional regulator
AMKCACLK_01926	2.22e-133	-	-	-	K	-	-	-	Transcriptional regulator
AMKCACLK_01927	2.76e-83	-	-	-	S	-	-	-	Domain of unknown function (DUF956)
AMKCACLK_01928	3.51e-222	manN	-	-	G	ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	system, mannose fructose sorbose family IID component
AMKCACLK_01929	5.16e-181	manY	-	-	G	ko:K02746,ko:K02795	ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko02000	PTS system
AMKCACLK_01930	3.73e-239	manL	2.7.1.191	-	G	ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	PTS system sorbose subfamily IIB component
AMKCACLK_01931	9.85e-78	melA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
AMKCACLK_01932	2.35e-119	melA	3.2.1.22	-	G	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603	ko00000,ko00001,ko01000	alpha-galactosidase
AMKCACLK_01933	3.34e-51	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMKCACLK_01934	3.02e-17	scrA5	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
AMKCACLK_01935	9.72e-270	scrA5	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
AMKCACLK_01936	3.3e-163	sacA	3.2.1.26	GH32	G	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	invertase
AMKCACLK_01937	1.05e-123	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
AMKCACLK_01938	3.7e-58	-	-	-	K	-	-	-	helix_turn_helix, arabinose operon control protein
AMKCACLK_01940	2.06e-108	-	-	-	S	-	-	-	COG NOG38524 non supervised orthologous group
AMKCACLK_01941	4.85e-100	-	-	-	-	-	-	-	-
AMKCACLK_01942	0.0	serS	6.1.1.11	-	J	ko:K01875	ko00970,map00970	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AMKCACLK_01943	1.13e-125	yjcK	2.3.1.128	-	J	ko:K03790	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
AMKCACLK_01944	3.88e-140	-	-	-	S	-	-	-	SNARE associated Golgi protein
AMKCACLK_01945	4.19e-198	-	-	-	I	-	-	-	alpha/beta hydrolase fold
AMKCACLK_01946	1.68e-163	plcR	-	-	K	ko:K20480	ko02024,map02024	ko00000,ko00001,ko03000	Helix-turn-helix
AMKCACLK_01947	0.0	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79	-	C	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	ko00000,ko00001,ko00002,ko01000	Belongs to the aldehyde dehydrogenase family
AMKCACLK_01948	3.12e-203	-	-	-	-	-	-	-	-
AMKCACLK_01949	2.25e-160	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_01950	1.22e-67	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_01951	2.7e-278	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
AMKCACLK_01952	0.0	ydgH	-	-	S	ko:K06994	-	ko00000	MMPL family
AMKCACLK_01953	5.77e-127	yobS	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
AMKCACLK_01954	1.97e-208	-	3.5.2.6	-	V	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	ko00000,ko00001,ko00002,ko01000,ko01504	Beta-lactamase enzyme family
AMKCACLK_01955	1.59e-213	corA	-	-	P	ko:K03284	-	ko00000,ko02000	CorA-like Mg2+ transporter protein
AMKCACLK_01956	1.17e-307	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
AMKCACLK_01957	0.0	-	-	-	S	-	-	-	Zn-dependent metallo-hydrolase RNA specificity domain
AMKCACLK_01958	5.62e-187	-	-	-	P	ko:K02026	-	ko00000,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
AMKCACLK_01959	5.48e-201	-	-	-	P	ko:K02025	-	ko00000,ko00002,ko02000	ABC-type sugar transport systems, permease components
AMKCACLK_01960	7.73e-256	malK	-	-	P	ko:K10112,ko:K17240	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ATPases associated with a variety of cellular activities
AMKCACLK_01961	0.0	pepD1	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
AMKCACLK_01962	2.53e-204	endA	-	-	F	ko:K15051	-	ko00000	DNA RNA non-specific endonuclease
AMKCACLK_01963	3.6e-216	-	2.7.7.7	-	L	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	EXOIII
AMKCACLK_01964	6.96e-201	-	-	-	K	-	-	-	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AMKCACLK_01967	1.09e-155	-	-	-	L	-	-	-	Transposase DDE domain
AMKCACLK_01968	2.25e-72	pinR1	-	-	L	-	-	-	Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
AMKCACLK_01969	2.34e-158	tnp1216	-	-	L	ko:K07498	-	ko00000	DDE domain
AMKCACLK_01970	3.62e-22	ytgB	-	-	S	-	-	-	Transglycosylase associated protein
AMKCACLK_01971	2.69e-167	-	-	-	S	-	-	-	Phage Mu protein F like protein
AMKCACLK_01972	7.99e-97	tnpR	-	-	L	-	-	-	Resolvase, N terminal domain
AMKCACLK_01973	2.16e-18	pinR1	-	-	L	-	-	-	Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
AMKCACLK_01974	3.84e-142	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_01975	1.74e-70	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_01976	1.56e-188	idhA	1.1.1.28	-	CH	ko:K03778	ko00620,ko01120,map00620,map01120	ko00000,ko00001,ko01000	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AMKCACLK_01977	2e-99	-	-	-	S	ko:K07088	-	ko00000	Membrane transport protein
AMKCACLK_01978	2.07e-201	is18	-	-	L	-	-	-	Integrase core domain
AMKCACLK_01979	1.44e-51	-	-	-	L	ko:K07483	-	ko00000	Transposase and inactivated derivatives
AMKCACLK_01980	7.66e-97	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
AMKCACLK_01981	1.34e-203	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_01982	1.88e-64	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_01983	2.25e-111	-	-	-	-	-	-	-	-
AMKCACLK_01984	4.88e-59	-	-	-	L	ko:K07473	-	ko00000,ko02048	Addiction module antitoxin, RelB DinJ family
AMKCACLK_01985	8.29e-63	repA	-	-	S	-	-	-	Replication initiator protein A
AMKCACLK_01986	3.53e-92	repA	-	-	S	-	-	-	Replication initiator protein A
AMKCACLK_01987	3.84e-84	-	-	-	M	-	-	-	domain protein
AMKCACLK_01988	3.24e-116	-	-	-	M	-	-	-	YSIRK type signal peptide
AMKCACLK_01989	9.08e-21	-	-	-	M	-	-	-	domain protein
AMKCACLK_01990	2.71e-180	pnuC	-	-	H	ko:K03811	-	ko00000,ko02000	nicotinamide mononucleotide transporter
AMKCACLK_01991	1.63e-15	-	-	-	-	-	-	-	-
AMKCACLK_01992	2.25e-304	-	-	-	L	-	-	-	Probable transposase
AMKCACLK_01993	6.08e-282	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_01994	0.0	-	-	-	V	-	-	-	ABC transporter transmembrane region
AMKCACLK_01995	2.91e-229	pepR	3.4.11.5	-	E	ko:K01259	ko00330,map00330	ko00000,ko00001,ko01000,ko01002	Releases the N-terminal proline from various substrates
AMKCACLK_01996	2.42e-238	add	3.5.4.2, 3.5.4.4	-	F	ko:K01488,ko:K02029,ko:K21053	ko00230,ko01100,ko05340,map00230,map01100,map05340	ko00000,ko00001,ko00002,ko01000,ko02000	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AMKCACLK_01997	7.59e-123	-	-	-	F	-	-	-	Nucleoside 2-deoxyribosyltransferase
AMKCACLK_01998	5.86e-106	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
AMKCACLK_01999	4.17e-111	XK27_03150	2.3.1.57	-	K	ko:K22441	-	ko00000,ko01000	Acetyltransferase (GNAT) domain
AMKCACLK_02000	5.44e-88	yybA	-	-	K	-	-	-	Transcriptional regulator
AMKCACLK_02001	1.82e-18	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
AMKCACLK_02002	1.81e-88	-	-	-	S	-	-	-	Peptidase propeptide and YPEB domain
AMKCACLK_02003	7.39e-311	-	-	-	G	ko:K02027	-	ko00000,ko00002,ko02000	Bacterial extracellular solute-binding protein
AMKCACLK_02004	5.59e-134	efp	-	-	J	ko:K02356	-	ko00000,ko03012	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AMKCACLK_02005	7.88e-219	coaA	2.7.1.33	-	F	ko:K00867	ko00770,ko01100,map00770,map01100	ko00000,ko00001,ko00002,ko01000	Pantothenic acid kinase
AMKCACLK_02006	9.7e-133	-	-	-	E	-	-	-	GDSL-like Lipase/Acylhydrolase
AMKCACLK_02007	5.9e-146	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_02008	1.99e-61	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_02009	0.0	helD	3.6.4.12	-	L	ko:K03657	ko03420,ko03430,map03420,map03430	ko00000,ko00001,ko01000,ko03400	DNA helicase
AMKCACLK_02010	1.82e-160	XK27_08875	-	-	O	-	-	-	PFAM peptidase M10A and M12B, matrixin and adamalysin
AMKCACLK_02011	1.78e-161	gpm2	-	-	G	-	-	-	Phosphoglycerate mutase family
AMKCACLK_02012	2.62e-174	-	-	-	L	ko:K07496	-	ko00000	Transposase
AMKCACLK_02013	1.99e-61	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_02014	3.28e-123	racD	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
AMKCACLK_02015	1.15e-310	-	-	-	P	ko:K07085	-	ko00000	Predicted Permease Membrane Region
AMKCACLK_02016	9.61e-186	aspD	4.1.1.12	-	E	ko:K09758	ko00250,ko00270,ko01100,ko01230,map00250,map00270,map01100,map01230	ko00000,ko00001,ko01000	Aminotransferase
AMKCACLK_02017	1.06e-116	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMKCACLK_02018	3.46e-57	yhxD	-	-	IQ	-	-	-	Enoyl-(Acyl carrier protein) reductase
AMKCACLK_02019	1.89e-22	-	-	-	-	-	-	-	-
AMKCACLK_02020	3.42e-41	-	-	-	S	-	-	-	Transglycosylase associated protein
AMKCACLK_02021	6.49e-110	asp1	-	-	S	-	-	-	Asp23 family, cell envelope-related function
AMKCACLK_02022	2.51e-31	-	-	-	S	-	-	-	Small integral membrane protein (DUF2273)
AMKCACLK_02023	1.31e-121	-	-	-	-	-	-	-	-
AMKCACLK_02024	9.45e-31	-	-	-	-	-	-	-	-
AMKCACLK_02025	7.97e-311	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_02026	1.39e-60	aspD	4.1.1.12	-	E	ko:K09758	ko00250,ko00270,ko01100,ko01230,map00250,map00270,map01100,map01230	ko00000,ko00001,ko01000	Aminotransferase class I and II
AMKCACLK_02027	0.0	-	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	FtsX-like permease family
AMKCACLK_02028	2.04e-172	cysA	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
AMKCACLK_02029	7e-304	-	-	-	S	-	-	-	response to antibiotic
AMKCACLK_02030	2.15e-161	-	-	-	-	-	-	-	-
AMKCACLK_02031	5.95e-144	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
AMKCACLK_02032	3.18e-37	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
AMKCACLK_02033	6.89e-66	pacL3	3.6.3.8	-	P	ko:K01537	-	ko00000,ko01000	P-type ATPase
AMKCACLK_02034	5.37e-29	-	-	-	-	-	-	-	-
AMKCACLK_02035	7.24e-22	-	-	-	-	-	-	-	-
AMKCACLK_02036	2.73e-240	ansA	3.5.1.1	-	EJ	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110	ko00000,ko00001,ko01000	L-asparaginase, type I
AMKCACLK_02037	1.04e-169	-	-	-	K	ko:K03481	-	ko00000,ko03000	Helix-turn-helix domain, rpiR family
AMKCACLK_02038	0.0	malH	3.2.1.122	GH4	G	ko:K01232	ko00500,map00500	ko00000,ko00001,ko01000	Family 4 glycosyl hydrolase C-terminal domain
AMKCACLK_02039	3.29e-52	-	-	-	-	-	-	-	-
AMKCACLK_02040	1.66e-59	-	-	-	-	-	-	-	-
AMKCACLK_02041	3.44e-127	-	-	-	-	-	-	-	-
AMKCACLK_02042	8.65e-52	-	-	-	K	ko:K06977	-	ko00000	acetyltransferase
AMKCACLK_02043	3.04e-114	-	-	-	V	-	-	-	Beta-lactamase
AMKCACLK_02044	1.44e-86	-	-	-	V	-	-	-	Beta-lactamase
AMKCACLK_02045	2.85e-209	galU	2.7.7.9	-	M	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	ko00000,ko00001,ko00002,ko01000	UTP-glucose-1-phosphate uridylyltransferase
AMKCACLK_02046	0.0	speA	4.1.1.17, 4.1.1.18, 4.1.1.19	-	E	ko:K01581,ko:K01582,ko:K01585	ko00310,ko00330,ko00480,ko00960,ko01100,ko01110,ko01130,map00310,map00330,map00480,map00960,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Orn/Lys/Arg decarboxylase, C-terminal domain
AMKCACLK_02047	0.0	-	-	-	E	-	-	-	Amino acid permease
AMKCACLK_02048	1.28e-75	-	-	-	-	-	-	-	-
AMKCACLK_02049	2.7e-278	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
AMKCACLK_02050	6.19e-82	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
AMKCACLK_02053	5.52e-285	-	-	-	G	ko:K02445	-	ko00000,ko02000	Major Facilitator Superfamily
AMKCACLK_02054	7.73e-122	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMKCACLK_02055	3.77e-151	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMKCACLK_02057	8.42e-198	rfbD	1.1.1.133	-	M	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	ko00000,ko00001,ko00002,ko01000	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
AMKCACLK_02059	3.83e-280	cps1C	-	-	S	ko:K03328	-	ko00000	Membrane protein involved in the export of O-antigen and teichoic acid
AMKCACLK_02060	1.25e-261	glf	5.4.99.9	-	M	ko:K01854	ko00052,ko00520,map00052,map00520	ko00000,ko00001,ko01000	UDP-galactopyranose mutase
AMKCACLK_02061	2.68e-83	-	-	-	S	-	-	-	Psort location CytoplasmicMembrane, score 9.99
AMKCACLK_02062	8.67e-103	-	-	-	S	ko:K07011	-	ko00000	Glycosyltransferase like family 2
AMKCACLK_02063	2.5e-117	-	-	-	M	-	-	-	Glycosyl transferases group 1
AMKCACLK_02064	1.05e-141	-	-	-	M	-	-	-	Glycosyltransferase, group 1 family protein
AMKCACLK_02065	1.32e-142	-	-	-	S	ko:K07011	-	ko00000	Glycosyltransferase like family 2
AMKCACLK_02066	1.03e-152	cps3J	-	-	M	-	-	-	Domain of unknown function (DUF4422)
AMKCACLK_02067	1.12e-124	rfbP	-	-	M	ko:K13012,ko:K19428	-	ko00000,ko01000,ko01005	Bacterial sugar transferase
AMKCACLK_02068	1.9e-185	ywqE	3.1.3.48	-	GM	ko:K01104	-	ko00000,ko01000	PHP domain protein
AMKCACLK_02069	2.46e-161	ywqD	-	-	D	-	-	-	Capsular exopolysaccharide family
AMKCACLK_02070	8.47e-188	epsB	-	-	M	-	-	-	biosynthesis protein
AMKCACLK_02071	2.46e-248	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
AMKCACLK_02072	4.53e-283	hflX	-	-	S	ko:K03665	-	ko00000,ko03009	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AMKCACLK_02073	2.55e-12	-	-	-	S	-	-	-	Cysteine-rich secretory protein family
AMKCACLK_02076	2.86e-198	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
AMKCACLK_02077	5.51e-69	-	-	-	L	-	-	-	Putative transposase of IS4/5 family (DUF4096)
AMKCACLK_02078	2.41e-314	XK27_08635	-	-	S	ko:K09157	-	ko00000	UPF0210 protein
AMKCACLK_02079	4.82e-55	XK27_08630	-	-	T	ko:K07166	-	ko00000	Belongs to the UPF0237 family
AMKCACLK_02080	0.0	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMKCACLK_02081	3.43e-164	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC P60 family protein
AMKCACLK_02082	0.0	-	-	-	L	-	-	-	Probable transposase
AMKCACLK_02083	2.15e-137	-	-	-	L	-	-	-	Resolvase, N terminal domain
AMKCACLK_02084	1.59e-72	-	-	-	S	ko:K06921	-	ko00000	Archaea bacterial proteins of unknown function
AMKCACLK_02085	1.97e-37	-	-	-	S	ko:K06921	-	ko00000	Archaea bacterial proteins of unknown function
AMKCACLK_02086	1.49e-121	-	-	-	M	ko:K21471	-	ko00000,ko01000,ko01002,ko01011	NlpC/P60 family
AMKCACLK_02087	2.3e-124	gmk2	2.7.4.8	-	F	ko:K00942	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko00002,ko01000	Guanylate kinase homologues.
AMKCACLK_02088	5.24e-41	-	-	-	-	-	-	-	-
AMKCACLK_02089	0.0	-	-	-	S	-	-	-	O-antigen ligase like membrane protein
AMKCACLK_02090	6.65e-129	-	-	-	-	-	-	-	-
AMKCACLK_02091	3.75e-98	nrdI	-	-	F	ko:K03647	-	ko00000	Belongs to the NrdI family
AMKCACLK_02092	7.34e-15	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AMKCACLK_02093	1.7e-28	-	-	-	-	-	-	-	-
AMKCACLK_02094	2.72e-101	-	-	-	-	-	-	-	-
AMKCACLK_02095	3.33e-306	-	-	-	L	-	-	-	Probable transposase
AMKCACLK_02096	1.43e-106	-	-	-	S	-	-	-	Threonine/Serine exporter, ThrE
AMKCACLK_02097	1.14e-177	-	-	-	S	-	-	-	Putative threonine/serine exporter
AMKCACLK_02098	0.0	-	-	-	S	-	-	-	ABC transporter
AMKCACLK_02099	2.34e-74	-	-	-	-	-	-	-	-
AMKCACLK_02100	2.3e-128	rimL	-	-	J	ko:K03817	-	ko00000,ko01000,ko03009	Acetyltransferase (GNAT) domain
AMKCACLK_02101	4.39e-148	-	-	-	S	ko:K07150	-	ko00000	Protein of unknown function (DUF554)
AMKCACLK_02102	6.23e-286	brpA	-	-	K	-	-	-	Cell envelope-like function transcriptional attenuator common domain protein
AMKCACLK_02103	0.0	pepF	-	-	E	ko:K08602	-	ko00000,ko01000,ko01002	oligoendopeptidase F
AMKCACLK_02104	1.45e-54	-	-	-	S	-	-	-	Fic/DOC family
AMKCACLK_02105	7.4e-283	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_02106	2.66e-57	-	-	-	S	-	-	-	Enterocin A Immunity
AMKCACLK_02107	5.6e-65	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
AMKCACLK_02108	6.06e-112	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
AMKCACLK_02109	1e-28	lctP	-	-	C	ko:K03303	-	ko00000,ko02000	L-lactate permease
AMKCACLK_02110	2.7e-278	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
AMKCACLK_02111	7.72e-297	tcyP	-	-	U	ko:K06956	-	ko00000	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
AMKCACLK_02112	9.17e-172	znuB	-	-	U	ko:K02075,ko:K09816	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC 3 transport family
AMKCACLK_02113	1.91e-151	adcC	-	-	P	ko:K02074,ko:K09817,ko:K11710	ko02010,map02010	ko00000,ko00001,ko00002,ko01000,ko02000	ABC transporter
AMKCACLK_02114	1.8e-202	-	-	-	P	ko:K02077	-	ko00000,ko00002,ko02000	Belongs to the bacterial solute-binding protein 9 family
AMKCACLK_02115	2.66e-57	-	-	-	K	ko:K21903	-	ko00000,ko03000	helix_turn_helix, Arsenical Resistance Operon Repressor
AMKCACLK_02116	2.36e-185	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_02117	6.55e-59	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_02118	0.0	fruA	2.7.1.202	-	GT	ko:K02768,ko:K02769,ko:K02770	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	Phosphotransferase System
AMKCACLK_02119	1.43e-264	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_02120	1.26e-214	pfkB	2.7.1.56	-	H	ko:K00882	ko00051,map00051	ko00000,ko00001,ko01000	Belongs to the carbohydrate kinase PfkB family. LacC subfamily
AMKCACLK_02121	2.38e-176	fruR	-	-	K	ko:K03436	-	ko00000,ko03000	DeoR C terminal sensor domain
AMKCACLK_02124	0.0	agl	3.2.1.20	GH31	G	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 31 family
AMKCACLK_02125	7.77e-36	-	-	-	-	-	-	-	-
AMKCACLK_02126	8.68e-44	-	-	-	-	-	-	-	-
AMKCACLK_02127	5.03e-45	-	-	-	K	ko:K07727	-	ko00000,ko03000	Transcriptional regulator
AMKCACLK_02128	7.68e-38	-	-	-	S	-	-	-	Enterocin A Immunity
AMKCACLK_02129	1.2e-18	-	-	-	S	-	-	-	Enterocin A Immunity
AMKCACLK_02130	1.79e-51	-	-	-	S	ko:K06921	-	ko00000	Archaea bacterial proteins of unknown function
AMKCACLK_02131	6.24e-203	-	-	-	S	ko:K06921	-	ko00000	Archaea bacterial proteins of unknown function
AMKCACLK_02132	3.86e-186	racD	5.1.1.13	-	M	ko:K01779	ko00250,ko01054,map00250,map01054	ko00000,ko00001,ko01000	Belongs to the aspartate glutamate racemases family
AMKCACLK_02133	0.0	murE	6.3.2.13, 6.3.2.7	-	M	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100	ko00000,ko00001,ko01000,ko01011	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AMKCACLK_02134	2.54e-267	-	-	-	T	-	-	-	His Kinase A (phosphoacceptor) domain
AMKCACLK_02135	2.9e-157	vanR	-	-	K	-	-	-	response regulator
AMKCACLK_02136	0.0	ndvA	-	-	V	ko:K06147	-	ko00000,ko02000	ABC transporter
AMKCACLK_02137	0.0	-	-	-	V	ko:K06147,ko:K06148	-	ko00000,ko02000	ABC transporter, ATP-binding protein
AMKCACLK_02138	1.88e-178	-	-	-	S	-	-	-	Protein of unknown function (DUF1129)
AMKCACLK_02139	2.8e-256	ychF	-	-	J	ko:K06942	-	ko00000,ko03009	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
AMKCACLK_02140	1.83e-58	yyzM	-	-	S	-	-	-	Bacterial protein of unknown function (DUF951)
AMKCACLK_02141	3.96e-197	spo0J	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
AMKCACLK_02142	1.6e-174	soj	-	-	D	ko:K03496	-	ko00000,ko03036,ko04812	Sporulation initiation inhibitor
AMKCACLK_02143	3.14e-191	noc	-	-	K	ko:K03497	-	ko00000,ko03000,ko03036,ko04812	Belongs to the ParB family
AMKCACLK_02144	9.37e-169	rsmG	2.1.1.170	-	J	ko:K03501	-	ko00000,ko01000,ko03009,ko03036	Specifically methylates the N7 position of a guanine in 16S rRNA
AMKCACLK_02145	2.12e-114	cvpA	-	-	S	-	-	-	Colicin V production protein
AMKCACLK_02146	3.16e-231	apbE	2.7.1.180	-	H	ko:K03734	-	ko00000,ko01000	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
AMKCACLK_02147	1.06e-190	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
AMKCACLK_02148	1.82e-126	azr	1.5.1.36	-	S	ko:K22394	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
AMKCACLK_02149	5.66e-124	azo1	1.5.1.36, 1.7.1.6	-	S	ko:K03206,ko:K19784,ko:K22393	ko00740,ko01100,map00740,map01100	ko00000,ko00001,ko01000	NADPH-dependent FMN reductase
AMKCACLK_02150	1.43e-141	-	-	-	K	-	-	-	WHG domain
AMKCACLK_02151	4.74e-51	-	-	-	-	-	-	-	-
AMKCACLK_02152	0.0	pepD4	-	-	E	ko:K08659	-	ko00000,ko01000,ko01002	Dipeptidase
AMKCACLK_02153	4.83e-154	lolD	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
AMKCACLK_02154	2.26e-228	yxeA	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
AMKCACLK_02155	5.69e-122	-	-	-	K	-	-	-	Bacterial regulatory proteins, tetR family
AMKCACLK_02156	4.23e-145	-	-	-	G	-	-	-	phosphoglycerate mutase
AMKCACLK_02157	5.44e-178	-	-	-	S	ko:K06889	-	ko00000	Alpha/beta hydrolase family
AMKCACLK_02158	8.38e-183	XK27_08125	-	-	S	ko:K09861	-	ko00000	Belongs to the UPF0246 family
AMKCACLK_02159	7.81e-155	-	-	-	-	-	-	-	-
AMKCACLK_02160	3.84e-62	-	-	-	C	-	-	-	Domain of unknown function (DUF4931)
AMKCACLK_02161	1.74e-280	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_02162	4.44e-238	-	-	-	S	-	-	-	Putative peptidoglycan binding domain
AMKCACLK_02163	1.58e-33	-	-	-	-	-	-	-	-
AMKCACLK_02164	0.0	dtpT	-	-	U	ko:K03305	-	ko00000	amino acid peptide transporter
AMKCACLK_02165	0.0	pepN	3.4.11.2	-	E	ko:K01256	ko00480,ko01100,map00480,map01100	ko00000,ko00001,ko01000,ko01002	aminopeptidase
AMKCACLK_02167	2.79e-77	lysM	-	-	M	-	-	-	LysM domain
AMKCACLK_02168	8.23e-222	-	-	-	-	-	-	-	-
AMKCACLK_02169	1.19e-288	mdtG2	-	-	EGP	ko:K08161	-	ko00000,ko02000	Transporter, major facilitator family protein
AMKCACLK_02170	4.74e-96	-	-	-	L	-	-	-	PFAM transposase, IS4 family protein
AMKCACLK_02171	1.17e-29	repA	-	-	S	-	-	-	Replication initiator protein A
AMKCACLK_02172	1.34e-44	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMKCACLK_02173	1.9e-11	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Transcriptional regulator
AMKCACLK_02174	2.69e-265	-	-	-	EGP	-	-	-	Major facilitator Superfamily
AMKCACLK_02175	2.28e-149	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Transcriptional regulator
AMKCACLK_02176	5.51e-265	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_02177	2.57e-28	-	-	-	-	-	-	-	-
AMKCACLK_02178	1.1e-148	ywdE	-	-	K	ko:K20375	ko02024,map02024	ko00000,ko00001,ko03000	Transcriptional regulator
AMKCACLK_02179	1.79e-288	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMKCACLK_02180	1.14e-53	-	-	-	S	-	-	-	Enterocin A Immunity
AMKCACLK_02181	0.0	nrdE	1.17.4.1	-	F	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AMKCACLK_02182	1.39e-96	nrdI	-	-	F	ko:K03647	-	ko00000	Probably involved in ribonucleotide reductase function
AMKCACLK_02183	2.11e-249	nrdF	1.17.4.1	-	F	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	ko00000,ko00001,ko00002,ko01000,ko03400	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AMKCACLK_02184	2.99e-107	dar	1.1.1.304, 1.1.1.76	-	IQ	ko:K03366	ko00650,map00650	ko00000,ko00001,ko01000	reductase
AMKCACLK_02185	8.59e-94	metQ1	-	-	P	ko:K02073	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the nlpA lipoprotein family
AMKCACLK_02186	1.82e-180	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMKCACLK_02187	5.55e-69	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMKCACLK_02188	2.49e-114	luxS	4.4.1.21	-	H	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	ko00000,ko00001,ko00002,ko01000	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
AMKCACLK_02189	0.0	metE	2.1.1.14	-	E	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	ko00000,ko00001,ko00002,ko01000	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AMKCACLK_02190	6.1e-213	metF	1.5.1.20	-	C	ko:K00297	ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523	ko00000,ko00001,ko00002,ko01000	Methylenetetrahydrofolate reductase
AMKCACLK_02191	9.65e-279	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_02192	1.01e-127	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMKCACLK_02193	1.94e-93	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMKCACLK_02194	7.67e-234	-	-	-	P	ko:K06901	-	ko00000,ko02000	secondary active sulfate transmembrane transporter activity
AMKCACLK_02195	2.19e-124	-	2.4.2.7	-	F	ko:K00759	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000,ko04147	Phosphoribosyl transferase domain
AMKCACLK_02196	9.07e-240	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_02197	1.84e-97	bioY	-	-	S	ko:K03523	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	BioY family
AMKCACLK_02198	2.25e-241	birA	6.3.4.15	-	H	ko:K03524	ko00780,ko01100,map00780,map01100	ko00000,ko00001,ko01000,ko03000	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
AMKCACLK_02199	8.96e-173	fabI	1.3.1.10, 1.3.1.9	-	I	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Enoyl- acyl-carrier-protein reductase NADH
AMKCACLK_02200	2.6e-183	accA	2.1.3.15, 6.4.1.2	-	I	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	alpha subunit
AMKCACLK_02201	5.09e-202	accD	2.1.3.15, 6.4.1.2	-	I	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
AMKCACLK_02202	0.0	accC	6.3.4.14, 6.4.1.2	-	I	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002,ko01000	Acetyl-CoA carboxylase biotin carboxylase subunit
AMKCACLK_02203	6.67e-94	fabZ2	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	FabA-like domain
AMKCACLK_02204	5.23e-102	accB	-	-	I	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	ko00000,ko00001,ko00002	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
AMKCACLK_02205	8.97e-293	fabF	2.3.1.179	-	I	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
AMKCACLK_02206	1.09e-164	fabG	1.1.1.100	-	IQ	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	reductase
AMKCACLK_02207	9.59e-215	fabD	2.3.1.39	-	I	ko:K00645,ko:K15327,ko:K15329	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	ko00000,ko00001,ko00002,ko01000,ko01004,ko01008	Malonyl CoA-acyl carrier protein transacylase
AMKCACLK_02208	1.53e-47	acpP	-	-	IQ	ko:K02078	-	ko00000,ko00001	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AMKCACLK_02209	1.28e-230	fabH	2.3.1.180	-	I	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AMKCACLK_02210	7.17e-104	-	-	-	K	-	-	-	Transcriptional regulator
AMKCACLK_02211	5.77e-102	fabZ	4.2.1.59	-	I	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	ko00000,ko00001,ko00002,ko01000,ko01004	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
AMKCACLK_02212	1.47e-188	pdp	2.4.2.2	-	F	ko:K00756	ko00240,ko01100,map00240,map01100	ko00000,ko00001,ko01000	pyrimidine-nucleoside phosphorylase
AMKCACLK_02213	1.27e-22	-	-	-	S	-	-	-	Transglycosylase associated protein
AMKCACLK_02214	6e-220	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
AMKCACLK_02215	5.43e-187	-	-	-	L	-	-	-	An automated process has identified a potential problem with this gene model
AMKCACLK_02216	1.06e-111	-	-	-	L	-	-	-	Resolvase, N terminal domain
AMKCACLK_02217	1.23e-166	-	-	-	L	ko:K07485	-	ko00000	Transposase
AMKCACLK_02218	1.28e-93	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_02219	1.1e-199	glcU	-	-	U	ko:K05340	-	ko00000,ko02000	sugar transport
AMKCACLK_02220	2.42e-219	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_02221	0.0	uvrA2	-	-	L	-	-	-	ABC transporter
AMKCACLK_02222	7.22e-133	-	-	-	L	-	-	-	HTH-like domain
AMKCACLK_02223	1.61e-118	-	-	-	L	ko:K07483,ko:K07497	-	ko00000	Helix-turn-helix domain
AMKCACLK_02224	7.93e-289	oxlT	-	-	P	ko:K08177	-	ko00000,ko02000	Major Facilitator Superfamily
AMKCACLK_02226	2.75e-91	-	-	-	L	-	-	-	Transposase and inactivated derivatives, IS30 family
AMKCACLK_02227	2.49e-276	yceI	-	-	EGP	ko:K08369	-	ko00000,ko02000	Major Facilitator
AMKCACLK_02228	1.02e-196	nadC	2.4.2.19	-	H	ko:K00767	ko00760,ko01100,map00760,map01100	ko00000,ko00001,ko00002,ko01000	Quinolinate phosphoribosyl transferase, C-terminal domain
AMKCACLK_02229	2.42e-219	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_02230	2.7e-278	-	-	-	L	-	-	-	COG3547 Transposase and inactivated derivatives
AMKCACLK_02231	0.0	-	1.8.1.7	-	C	ko:K00383,ko:K21739	ko00480,ko04918,map00480,map04918	ko00000,ko00001,ko01000	Pyridine nucleotide-disulfide oxidoreductase
AMKCACLK_02232	1.6e-145	-	-	-	M	-	-	-	Collagen binding domain
AMKCACLK_02233	7.41e-84	-	-	-	M	-	-	-	Collagen binding domain
AMKCACLK_02234	7.07e-38	tnpR	-	-	L	-	-	-	Resolvase, N terminal domain
AMKCACLK_02235	9.3e-56	ymdB	-	-	S	-	-	-	Macro domain protein
AMKCACLK_02236	5.67e-197	malG	-	-	P	ko:K15772	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	ABC transporter permease
AMKCACLK_02237	0.0	malF	-	-	P	ko:K15771	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Binding-protein-dependent transport system inner membrane component
AMKCACLK_02238	1.29e-280	malE	-	-	G	ko:K15770	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Bacterial extracellular solute-binding protein
AMKCACLK_02239	3.19e-263	msmX	-	-	P	ko:K10112	ko02010,map02010	ko00000,ko00001,ko00002,ko02000	Belongs to the ABC transporter superfamily
AMKCACLK_02240	1.68e-149	pgmB	5.4.2.6	-	S	ko:K01838	ko00500,map00500	ko00000,ko00001,ko01000	beta-phosphoglucomutase
AMKCACLK_02241	0.0	mapA	2.4.1.8	GH65	G	ko:K00691	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	hydrolase, family 65, central catalytic
AMKCACLK_02242	0.0	nplT	3.2.1.133, 3.2.1.135, 3.2.1.54	GH13	G	ko:K01208	ko00500,ko01100,map00500,map01100	ko00000,ko00001,ko01000	Belongs to the glycosyl hydrolase 13 family
AMKCACLK_02243	0.0	malA1	3.2.1.10, 3.2.1.20	GH13,GH31	G	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	ko00000,ko00001,ko01000	Alpha amylase, catalytic domain
AMKCACLK_02244	4.29e-55	ackA	2.7.2.1	-	F	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AMKCACLK_02245	4.73e-306	-	-	-	L	-	-	-	Probable transposase
AMKCACLK_02246	4.69e-142	ackA	2.7.2.1	-	H	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AMKCACLK_02247	1.68e-225	yvdE	-	-	K	-	-	-	helix_turn _helix lactose operon repressor
AMKCACLK_02248	1.91e-190	-	3.1.3.48	-	T	ko:K01104	-	ko00000,ko01000	Tyrosine phosphatase family
AMKCACLK_02249	3.49e-288	glpK	2.7.1.30	-	F	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	ko00000,ko00001,ko01000,ko04147	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AMKCACLK_02250	6.65e-193	thiD	2.7.1.49, 2.7.4.7	-	H	ko:K00941	ko00730,ko01100,map00730,map01100	ko00000,ko00001,ko00002,ko01000	Phosphomethylpyrimidine kinase
AMKCACLK_02252	1.29e-169	cobQ	-	-	S	ko:K07009	-	ko00000	glutamine amidotransferase
AMKCACLK_02253	1.38e-108	-	-	-	M	-	-	-	NlpC/P60 family
AMKCACLK_02254	1.57e-189	-	-	-	EG	-	-	-	EamA-like transporter family
AMKCACLK_02255	8.31e-141	-	-	-	-	-	-	-	-
AMKCACLK_02256	2.61e-101	-	-	-	-	-	-	-	-
AMKCACLK_02257	1.69e-234	-	-	-	S	-	-	-	DUF218 domain
AMKCACLK_02258	1.15e-170	yheS_2	-	-	S	ko:K18231,ko:K19349	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ATPases associated with a variety of cellular activities
AMKCACLK_02259	5.86e-39	yheS_2	-	-	S	ko:K18231,ko:K19349	ko02010,map02010	br01600,ko00000,ko00001,ko01504,ko02000	ATPases associated with a variety of cellular activities
AMKCACLK_02260	7.7e-110	-	-	-	-	-	-	-	-
AMKCACLK_02261	2.89e-75	-	-	-	-	-	-	-	-
AMKCACLK_02262	5.62e-310	purB	4.3.2.2	-	F	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	ko00000,ko00001,ko00002,ko01000	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AMKCACLK_02263	1.14e-312	purA	6.3.4.4	-	F	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	ko00000,ko00001,ko00002,ko01000	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AMKCACLK_02264	2.73e-232	guaC	1.7.1.7	-	F	ko:K00364	ko00230,map00230	ko00000,ko00001,ko01000	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
AMKCACLK_02267	1.83e-258	-	4.2.1.126	-	S	ko:K07106,ko:K09963	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Bacterial protein of unknown function (DUF871)
AMKCACLK_02268	2.64e-244	asnA	6.3.1.1	-	F	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230	ko00000,ko00001,ko01000	aspartate--ammonia ligase
AMKCACLK_02269	3.66e-133	-	-	-	E	-	-	-	amino acid
AMKCACLK_02270	9.08e-20	puuD	-	-	S	ko:K07010	-	ko00000,ko01002	peptidase C26
AMKCACLK_02271	4.14e-311	yifK	-	-	E	ko:K03293	-	ko00000	Amino acid permease
AMKCACLK_02272	2.19e-300	aapA	-	-	E	ko:K03293,ko:K11737	-	ko00000,ko02000	Amino acid permease
AMKCACLK_02273	2.42e-162	-	-	-	-	-	-	-	-
AMKCACLK_02274	3.58e-155	sipS3	3.4.21.89	-	U	ko:K03100	ko02024,ko03060,map02024,map03060	ko00000,ko00001,ko01000,ko01002	Belongs to the peptidase S26 family
AMKCACLK_02275	0.0	clpE	-	-	O	ko:K03697,ko:K04086	-	ko00000,ko03110	AAA domain (Cdc48 subfamily)
AMKCACLK_02276	2.67e-198	-	-	-	S	-	-	-	Alpha/beta hydrolase of unknown function (DUF915)
AMKCACLK_02277	3.37e-274	pts13C	-	-	G	ko:K02761	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko02000	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AMKCACLK_02278	5.35e-290	B4168_4126	-	-	L	ko:K07493	-	ko00000	Transposase
AMKCACLK_02279	1.26e-160	-	-	-	V	ko:K02003	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
AMKCACLK_02280	4.81e-137	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
AMKCACLK_02281	1.9e-237	ylbB	-	-	V	ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter permease
AMKCACLK_02282	8e-49	-	-	-	-	-	-	-	-
AMKCACLK_02283	0.0	ytgP	-	-	S	ko:K03328	-	ko00000	Polysaccharide biosynthesis protein
AMKCACLK_02284	2.72e-199	lysA2	-	-	M	ko:K07273	-	ko00000	Glycosyl hydrolases family 25
AMKCACLK_02285	1.96e-311	tnpA1	-	-	L	-	-	-	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMKCACLK_02286	3.54e-156	-	-	-	S	-	-	-	Protein of unknown function (DUF975)
AMKCACLK_02287	4.68e-21	-	-	-	-	-	-	-	-
AMKCACLK_02288	5.79e-65	-	-	-	-	-	-	-	-
AMKCACLK_02289	6.93e-39	-	-	-	-	-	-	-	-
AMKCACLK_02290	3.65e-159	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
AMKCACLK_02291	5.83e-12	-	-	-	-	-	-	-	-
AMKCACLK_02293	2.66e-221	pbpX2	-	-	V	-	-	-	Beta-lactamase
AMKCACLK_02294	1.53e-305	dltD	-	-	M	ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
AMKCACLK_02295	1e-47	dltC	6.1.1.13	-	J	ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
AMKCACLK_02296	2.53e-305	dltB	-	-	M	ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01504	MBOAT, membrane-bound O-acyltransferase family
AMKCACLK_02297	0.0	dltA	6.1.1.13	-	H	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	ko00000,ko00001,ko00002,ko01000,ko01504	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
AMKCACLK_02298	6.46e-27	-	-	-	S	-	-	-	D-Ala-teichoic acid biosynthesis protein
AMKCACLK_02299	2e-67	-	-	-	-	-	-	-	-
AMKCACLK_02300	2.11e-273	-	-	-	S	-	-	-	Membrane
AMKCACLK_02301	6.18e-33	ykuL	-	-	S	-	-	-	IMP dehydrogenase activity
AMKCACLK_02302	2.05e-277	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_02303	0.0	cadA	-	-	P	-	-	-	P-type ATPase
AMKCACLK_02304	1.83e-259	napA	-	-	P	-	-	-	Sodium/hydrogen exchanger family
AMKCACLK_02305	9e-66	-	-	-	D	ko:K19159	-	ko00000,ko02048	Antitoxin component of a toxin-antitoxin (TA) module
AMKCACLK_02306	5.58e-63	yoeB	-	-	S	ko:K19158	-	ko00000,ko01000,ko02048	YoeB-like toxin of bacterial type II toxin-antitoxin system
AMKCACLK_02307	0.0	-	-	-	V	ko:K06148	-	ko00000,ko02000	ABC transporter transmembrane region
AMKCACLK_02308	1.09e-106	-	-	-	S	-	-	-	Putative adhesin
AMKCACLK_02309	9.15e-200	mutR	-	-	K	-	-	-	Helix-turn-helix XRE-family like proteins
AMKCACLK_02310	1.77e-61	-	-	-	-	-	-	-	-
AMKCACLK_02311	1.14e-244	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_02312	1.45e-152	-	-	-	S	ko:K07052	-	ko00000	CAAX protease self-immunity
AMKCACLK_02313	1.79e-248	-	-	-	S	-	-	-	DUF218 domain
AMKCACLK_02314	0.0	-	-	-	V	ko:K02003,ko:K02004	-	ko00000,ko00002,ko02000	ABC transporter, ATP-binding protein
AMKCACLK_02315	7.7e-126	-	-	-	S	-	-	-	ECF transporter, substrate-specific component
AMKCACLK_02316	1.25e-204	-	-	-	S	-	-	-	Aldo/keto reductase family
AMKCACLK_02317	4.67e-173	nagB	3.5.99.6	-	G	ko:K02564	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
AMKCACLK_02318	3.09e-128	-	-	-	K	-	-	-	rpiR family
AMKCACLK_02319	1.71e-182	-	-	-	S	ko:K09963	-	ko00000	Bacterial protein of unknown function (DUF871)
AMKCACLK_02320	4.15e-232	ybbE	3.4.16.4	-	V	ko:K21469	ko00550,map00550	ko00000,ko00001,ko01000,ko01002,ko01011	Beta-lactamase
AMKCACLK_02321	8.85e-159	murQ	4.2.1.126	-	G	ko:K07106	ko00520,ko01100,map00520,map01100	ko00000,ko00001,ko01000	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
AMKCACLK_02322	0.0	pts32BC	2.7.1.211	-	G	ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	ko00000,ko00001,ko00002,ko01000,ko02000	phosphotransferase system
AMKCACLK_02324	1.57e-150	dak	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
AMKCACLK_02325	6.91e-165	dgk2	2.7.1.76	-	F	ko:K10353	ko00230,ko01100,map00230,map01100	ko00000,ko00001,ko01000	deoxynucleoside kinase
AMKCACLK_02326	1.01e-185	-	-	-	S	-	-	-	haloacid dehalogenase-like hydrolase
AMKCACLK_02327	5.85e-293	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
AMKCACLK_02328	1.24e-219	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
AMKCACLK_02329	1.28e-282	-	-	-	L	ko:K07496	-	ko00000	transposase, IS605 OrfB family
AMKCACLK_02330	4.19e-13	-	-	-	S	ko:K07133	-	ko00000	cog cog1373
AMKCACLK_02331	3.49e-108	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
AMKCACLK_02332	4.43e-32	-	-	-	K	-	-	-	helix_turn_helix, mercury resistance
AMKCACLK_02333	6.33e-293	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
AMKCACLK_02334	1.8e-306	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMKCACLK_02335	3e-308	amt	-	-	P	ko:K03320	-	ko00000,ko02000	ammonium transporter
AMKCACLK_02336	2.59e-127	-	-	-	S	-	-	-	Uncharacterised protein family (UPF0236)
AMKCACLK_02337	8.58e-290	pbuG	-	-	S	ko:K06901	-	ko00000,ko02000	permease
AMKCACLK_02338	4.12e-47	-	-	-	-	-	-	-	-
AMKCACLK_02339	2.02e-101	atkY	-	-	K	ko:K02171	ko01501,map01501	ko00000,ko00001,ko00002,ko01504,ko03000	Penicillinase repressor
AMKCACLK_02340	2.08e-84	-	-	-	S	-	-	-	Cupredoxin-like domain
AMKCACLK_02341	1.81e-64	-	-	-	S	-	-	-	Cupredoxin-like domain
AMKCACLK_02342	0.0	copA	3.6.3.3, 3.6.3.4, 3.6.3.5, 3.6.3.54	-	P	ko:K01533,ko:K01534,ko:K17686	ko01524,ko04016,map01524,map04016	ko00000,ko00001,ko01000	P-type ATPase
AMKCACLK_02343	4.08e-21	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
AMKCACLK_02344	5.89e-48	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
AMKCACLK_02345	4.61e-99	-	-	-	EGP	ko:K08368	-	ko00000,ko02000	Sugar (and other) transporter
AMKCACLK_02346	1.3e-26	-	-	-	-	-	-	-	-
AMKCACLK_02347	6.76e-269	-	-	-	-	-	-	-	-
AMKCACLK_02348	0.0	eriC	-	-	P	ko:K03281	-	ko00000	chloride
AMKCACLK_02349	0.0	gnd	1.1.1.343, 1.1.1.44	-	H	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	ko00000,ko00001,ko00002,ko01000	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
AMKCACLK_02350	0.0	gidA	-	-	D	ko:K03495	-	ko00000,ko03016,ko03036	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
AMKCACLK_02351	0.0	mnmE	-	-	S	ko:K03650	-	ko00000,ko01000,ko03016	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
AMKCACLK_02352	5.34e-189	yidC	-	-	U	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	ko00000,ko00001,ko00002,ko02044,ko03029	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
AMKCACLK_02353	1.31e-81	rnpA	3.1.26.5	-	J	ko:K03536	-	ko00000,ko01000,ko03016	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
AMKCACLK_02354	3.26e-23	rpmH	-	-	J	ko:K02914	ko03010,map03010	br01610,ko00000,ko00001,ko00002,ko03011	Belongs to the bacterial ribosomal protein bL34 family