ORF_ID e_value Gene_name EC_number CAZy COGs KEGG_ko KEGG_Pathway BRITE Description
DBDEDFDM_00001 1.66e-95 - - - EGP - - - Major facilitator superfamily
DBDEDFDM_00002 3.68e-229 glkA 2.7.1.2 - G ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
DBDEDFDM_00003 0.0 - - - S - - - ATPases associated with a variety of cellular activities
DBDEDFDM_00004 1.16e-74 - - - EGP ko:K18926 - ko00000,ko00002,ko02000 Major facilitator Superfamily
DBDEDFDM_00005 2.07e-201 - - - I - - - alpha/beta hydrolase fold
DBDEDFDM_00006 1.2e-141 - - - S ko:K07005 - ko00000 Pyridoxamine 5'-phosphate oxidase
DBDEDFDM_00008 7.1e-70 - - - S - - - DUF218 domain
DBDEDFDM_00009 1.43e-52 - - - S - - - Protein of unknown function (DUF979)
DBDEDFDM_00010 4.32e-148 pcp 3.4.19.3 - O ko:K01304 - ko00000,ko01000,ko01002 Removes 5-oxoproline from various penultimate amino acid residues except L-proline
DBDEDFDM_00012 1.76e-161 - - - - - - - -
DBDEDFDM_00013 1.9e-73 - - - M - - - domain, Protein
DBDEDFDM_00014 8.64e-24 - - - M - - - domain, Protein
DBDEDFDM_00015 0.0 yjjK - - S - - - ATP-binding cassette protein, ChvD family
DBDEDFDM_00016 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 hydrolase family 20, catalytic
DBDEDFDM_00017 1.88e-219 tesB - - I ko:K10805 ko01040,map01040 ko00000,ko00001,ko01000,ko01004 Thioesterase-like superfamily
DBDEDFDM_00018 2.35e-107 - - - S - - - Protein of unknown function (DUF3180)
DBDEDFDM_00019 0.0 folK 2.7.6.3, 4.1.2.25 - H ko:K00950,ko:K13940 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
DBDEDFDM_00020 7.56e-209 folP 2.5.1.15 - H ko:K00796 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
DBDEDFDM_00021 2.05e-130 folE 3.5.4.16 - H ko:K01495 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 GTP cyclohydrolase
DBDEDFDM_00022 0.0 ftsH - - O ko:K03798 - ko00000,ko00002,ko01000,ko01002,ko03110 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DBDEDFDM_00023 1.08e-126 hpt 2.4.2.8 - F ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000 Belongs to the purine pyrimidine phosphoribosyltransferase family
DBDEDFDM_00024 2.86e-268 tilS 2.4.2.8, 6.3.4.19 - J ko:K00760,ko:K04075 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko01000,ko03016 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
DBDEDFDM_00025 0.0 dacB 3.4.16.4 - M ko:K07259 ko00550,map00550 ko00000,ko00001,ko01000,ko01002,ko01011 D-Ala-D-Ala carboxypeptidase 3 (S13) family
DBDEDFDM_00026 0.0 - - - - ko:K01992 - ko00000,ko00002,ko02000 -
DBDEDFDM_00027 4.56e-215 natA - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
DBDEDFDM_00028 3.97e-295 - - - M - - - Glycosyl transferase family 21
DBDEDFDM_00029 0.0 - - - S - - - AI-2E family transporter
DBDEDFDM_00030 5.42e-227 - - - M - - - Glycosyltransferase like family 2
DBDEDFDM_00031 1.48e-271 fucO 1.1.1.77, 1.1.99.37, 1.2.98.1 - C ko:K00048,ko:K17067 ko00625,ko00630,ko00640,ko00680,ko01120,ko01200,map00625,map00630,map00640,map00680,map01120,map01200 ko00000,ko00001,ko01000 Iron-containing alcohol dehydrogenase
DBDEDFDM_00034 1.7e-105 - - - S - - - Domain of unknown function (DUF4190)
DBDEDFDM_00035 5.63e-255 galE 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family
DBDEDFDM_00036 2.73e-195 trmB 2.1.1.33 - J ko:K03439 - ko00000,ko01000,ko03016 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
DBDEDFDM_00038 8.81e-23 - - - S ko:K18955 - ko00000,ko03000 Transcription factor WhiB
DBDEDFDM_00039 0.0 gph - - G ko:K16209 - ko00000,ko02000 Psort location CytoplasmicMembrane, score 10.00
DBDEDFDM_00040 0.0 lacZ6 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
DBDEDFDM_00041 8.2e-118 nagA 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Amidohydrolase family
DBDEDFDM_00042 2.23e-234 - - - K ko:K02529 - ko00000,ko03000 Transcriptional regulator, LacI family
DBDEDFDM_00043 2.44e-302 - - - T - - - HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DBDEDFDM_00044 5.05e-153 - - - K - - - Transcriptional regulatory protein, C terminal
DBDEDFDM_00045 6.68e-138 - - - - - - - -
DBDEDFDM_00046 1.6e-234 - - - V - - - N-Acetylmuramoyl-L-alanine amidase
DBDEDFDM_00047 5.3e-137 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
DBDEDFDM_00048 9.7e-236 - - - - - - - -
DBDEDFDM_00049 7.33e-14 - - - S - - - Psort location CytoplasmicMembrane, score 9.99
DBDEDFDM_00050 4.37e-289 - - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
DBDEDFDM_00051 4.56e-269 - - - V ko:K02004 - ko00000,ko00002,ko02000 Efflux ABC transporter, permease protein
DBDEDFDM_00052 3.56e-145 vex - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
DBDEDFDM_00053 1.55e-66 - - - E - - - Branched-chain amino acid transport protein (AzlD)
DBDEDFDM_00054 4.43e-250 - - - S - - - Oxidoreductase family, NAD-binding Rossmann fold
DBDEDFDM_00055 9.52e-124 ptpA 3.1.3.48 - T ko:K01104 - ko00000,ko01000 low molecular weight
DBDEDFDM_00056 1.57e-164 folA 1.5.1.3 - H ko:K00287 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 ko00000,ko00001,ko00002,ko01000 dihydrofolate reductase
DBDEDFDM_00057 4.99e-223 thyA 2.1.1.45 - F ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 ko00000,ko00001,ko00002,ko01000 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
DBDEDFDM_00058 4.35e-94 - - - O - - - OsmC-like protein
DBDEDFDM_00059 1.31e-244 - - - T - - - Universal stress protein family
DBDEDFDM_00060 9.72e-153 - - - M ko:K21471 - ko00000,ko01000,ko01002,ko01011 NlpC/P60 family
DBDEDFDM_00061 3.93e-227 - - - S - - - CHAP domain
DBDEDFDM_00062 1.28e-275 serC 2.6.1.52 - E ko:K00831 ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
DBDEDFDM_00063 4.6e-53 - - - - - - - -
DBDEDFDM_00064 9.24e-288 senX3 2.7.13.3 - T ko:K07768 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 ATPase histidine kinase DNA gyrase B HSP90 domain protein
DBDEDFDM_00065 9.33e-153 phoU - - P ko:K02039 - ko00000 Plays a role in the regulation of phosphate uptake
DBDEDFDM_00067 3.69e-178 gpmA 5.4.2.11 - G ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DBDEDFDM_00068 2.89e-224 menA 2.5.1.74 - H ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the MenA family. Type 1 subfamily
DBDEDFDM_00069 0.0 lysS 6.1.1.6 - J ko:K04567 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family
DBDEDFDM_00071 7.45e-278 - - - EGP ko:K08156,ko:K19577 - ko00000,ko02000 Major Facilitator Superfamily
DBDEDFDM_00072 0.0 - - - S - - - Domain of unknown function (DUF4037)
DBDEDFDM_00073 9.55e-146 - - - S - - - Protein of unknown function (DUF4125)
DBDEDFDM_00074 1.6e-203 - - - - - - - -
DBDEDFDM_00075 0.0 pspC - - KT - - - PspC domain
DBDEDFDM_00076 0.0 tcsS3 - - KT - - - PspC domain
DBDEDFDM_00077 1.18e-162 tcsR3 - - K - - - helix_turn_helix, Lux Regulon
DBDEDFDM_00079 1.74e-87 gnd 1.1.1.343, 1.1.1.44 - H ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
DBDEDFDM_00081 5.83e-181 pgl 3.1.1.31 - G ko:K01057 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
DBDEDFDM_00082 7.54e-240 opcA - - G - - - Glucose-6-phosphate dehydrogenase subunit
DBDEDFDM_00083 6.65e-171 zwf 1.1.1.363, 1.1.1.49 - G ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DBDEDFDM_00084 4.52e-123 - - - - - - - -
DBDEDFDM_00086 0.0 - 3.2.1.50 - G ko:K01205 ko00531,ko01100,ko04142,map00531,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko04147 Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain
DBDEDFDM_00088 1.26e-304 serS 6.1.1.11 - J ko:K01875 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
DBDEDFDM_00089 0.0 - 3.1.3.5 - F ko:K01081 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 ko00000,ko00001,ko01000 5'-nucleotidase, C-terminal domain
DBDEDFDM_00090 3.25e-273 - - - I - - - Diacylglycerol kinase catalytic domain
DBDEDFDM_00091 5.06e-198 arbG - - K ko:K03488 - ko00000,ko03000 CAT RNA binding domain
DBDEDFDM_00092 0.0 ptsG - - G ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 pts system, glucose-specific IIABC component
DBDEDFDM_00093 4.73e-05 - - - O ko:K18546 - ko00000,ko01000,ko01002 Peptidase s1 and s6 chymotrypsin hap
DBDEDFDM_00094 4.43e-57 - - - M - - - Spy0128-like isopeptide containing domain
DBDEDFDM_00096 0.0 pgm 5.4.2.2 - G ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
DBDEDFDM_00097 0.0 merA 1.16.1.1 - C ko:K00520,ko:K21739 - ko00000,ko01000 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DBDEDFDM_00098 0.0 - 3.2.1.35 - G ko:K01197 ko00531,ko01100,map00531,map01100 ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042 beta-N-acetylglucosaminidase
DBDEDFDM_00099 4.34e-261 rnhA 3.1.26.4 - L ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DBDEDFDM_00100 1.28e-162 rpiA 5.3.1.6 - G ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
DBDEDFDM_00101 5.18e-07 - - - S - - - Mitochondrial domain of unknown function (DUF1713)
DBDEDFDM_00102 6.9e-142 - - - - - - - -
DBDEDFDM_00103 0.0 radA - - O ko:K04485 - ko00000,ko03400 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
DBDEDFDM_00104 1.78e-304 ribF 2.7.1.26, 2.7.7.2 - H ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 ko00000,ko00001,ko00002,ko01000 riboflavin kinase
DBDEDFDM_00105 1.35e-162 truB 5.4.99.25 - J ko:K03177 - ko00000,ko01000,ko03016 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
DBDEDFDM_00106 8.76e-124 rbfA - - J ko:K02834 - ko00000,ko03009 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
DBDEDFDM_00107 0.0 infB - - J ko:K02519 - ko00000,ko03012,ko03029 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
DBDEDFDM_00108 1.16e-241 nusA - - K ko:K02600 - ko00000,ko03009,ko03021 Participates in both transcription termination and antitermination
DBDEDFDM_00109 6.58e-227 - - - - - - - -
DBDEDFDM_00110 5.85e-20 tnp3503b - - L - - - Transposase and inactivated derivatives
DBDEDFDM_00111 2.09e-45 - - - - - - - -
DBDEDFDM_00113 9.14e-198 - - - E - - - Transglutaminase/protease-like homologues
DBDEDFDM_00114 0.0 gcs2 - - S ko:K06048 - ko00000,ko01000 A circularly permuted ATPgrasp
DBDEDFDM_00115 4.08e-221 truA 5.4.99.12 - J ko:K06173 - ko00000,ko01000,ko03016 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
DBDEDFDM_00116 0.0 - 3.2.1.52 GH20 G ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 hydrolase family 20, catalytic
DBDEDFDM_00117 7.6e-95 rplQ - - J ko:K02879 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L17
DBDEDFDM_00118 1.4e-236 rpoA 2.7.7.6 - K ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DBDEDFDM_00119 7.34e-86 rpsK - - J ko:K02948 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
DBDEDFDM_00120 6.96e-83 rpsM - - J ko:K02952 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
DBDEDFDM_00121 1.03e-20 rpmJ - - J ko:K02919 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL36 family
DBDEDFDM_00122 6.91e-45 infA - - J ko:K02518 - ko00000,ko03012 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
DBDEDFDM_00123 4.79e-129 adk 2.7.4.3 - F ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
DBDEDFDM_00124 0.0 secY - - U ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
DBDEDFDM_00125 1.51e-94 rplO - - J ko:K02876 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 binds to the 23S rRNA
DBDEDFDM_00126 1.46e-34 rpmD - - J ko:K02907 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L30p/L7e
DBDEDFDM_00127 2.04e-149 rpsE - - J ko:K02988 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
DBDEDFDM_00128 1.53e-76 rplR - - J ko:K02881 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
DBDEDFDM_00129 2.69e-122 rplF - - J ko:K02933 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
DBDEDFDM_00130 9.65e-91 rpsH - - J ko:K02994 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
DBDEDFDM_00131 7.06e-40 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DBDEDFDM_00132 1.6e-133 rplE - - J ko:K02931 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
DBDEDFDM_00133 9.32e-70 rplX - - J ko:K02895 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
DBDEDFDM_00134 7.32e-79 rplN - - J ko:K02874 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
DBDEDFDM_00135 9.4e-57 rpsQ - - J ko:K02961 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
DBDEDFDM_00136 6.77e-51 rpmC - - J ko:K02904 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uL29 family
DBDEDFDM_00137 2.71e-98 rplP - - J ko:K02878 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
DBDEDFDM_00138 2.73e-161 rpsC - - J ko:K02982 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
DBDEDFDM_00139 2.21e-74 rplV - - J ko:K02890 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
DBDEDFDM_00140 1.4e-62 rpsS - - J ko:K02965 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
DBDEDFDM_00141 1.15e-196 rplB - - J ko:K02886 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
DBDEDFDM_00142 2.54e-61 rplW - - J ko:K02892 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
DBDEDFDM_00143 1.34e-154 rplD - - J ko:K02926 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the polypeptide exit tunnel
DBDEDFDM_00144 6.65e-153 rplC - - J ko:K02906 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
DBDEDFDM_00145 5.42e-67 rpsJ - - J ko:K02946 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Involved in the binding of tRNA to the ribosomes
DBDEDFDM_00146 1.07e-18 - - - S - - - YwiC-like protein
DBDEDFDM_00147 3.67e-95 - - - S - - - YwiC-like protein
DBDEDFDM_00148 7.57e-50 - - - S - - - YwiC-like protein
DBDEDFDM_00149 1.36e-213 budA 4.1.1.5 - H ko:K01575 ko00650,ko00660,map00650,map00660 ko00000,ko00001,ko01000 Alpha-acetolactate decarboxylase
DBDEDFDM_00150 0.0 adhE 1.1.1.1, 1.2.1.10, 1.2.1.81 - C ko:K04072,ko:K15515 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 belongs to the iron- containing alcohol dehydrogenase family
DBDEDFDM_00151 1.57e-300 - - - GK - - - transcriptional repressor of nag (N-acetylglucosamine) operon K02565
DBDEDFDM_00152 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G ko:K01214,ko:K02438 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the glycosyl hydrolase 13 family
DBDEDFDM_00153 1.71e-99 rpsI - - J ko:K02996 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS9 family
DBDEDFDM_00154 2.64e-103 rplM - - J ko:K02871 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
DBDEDFDM_00155 0.0 malQ 2.4.1.25 GH77 G ko:K00705 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 4-alpha-glucanotransferase
DBDEDFDM_00156 4.17e-152 - - - - - - - -
DBDEDFDM_00157 3.29e-146 yigZ - - S - - - Uncharacterized protein family UPF0029
DBDEDFDM_00158 0.0 - - - M ko:K07282 - ko00000 Bacterial capsule synthesis protein PGA_cap
DBDEDFDM_00160 1.22e-302 dinB 2.7.7.7 - L ko:K02346 - ko00000,ko01000,ko03400 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DBDEDFDM_00161 2e-285 dapC - - E - - - Aminotransferase class I and II
DBDEDFDM_00162 3.55e-81 fdxA - - C ko:K05524 - ko00000 4Fe-4S binding domain
DBDEDFDM_00163 4.5e-279 murB 1.3.1.98 - M ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation
DBDEDFDM_00164 2.71e-35 rpmG - - J ko:K02913 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L33
DBDEDFDM_00169 1.01e-55 yeaC - - S ko:K03924 - ko00000,ko01000 ATPase family associated with various cellular activities (AAA)
DBDEDFDM_00170 1.49e-171 - 3.5.2.6 - V ko:K17836 ko00311,ko01130,ko01501,map00311,map01130,map01501 ko00000,ko00001,ko00002,ko01000,ko01504 Beta-lactamase enzyme family
DBDEDFDM_00171 3.49e-63 groS - - O ko:K04078 - ko00000,ko03029,ko03110 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
DBDEDFDM_00172 1e-269 - - - - - - - -
DBDEDFDM_00173 1.2e-191 rimJ 2.3.1.128 - J ko:K03790 - ko00000,ko01000,ko03009 Acetyltransferase (GNAT) domain
DBDEDFDM_00174 5.69e-154 ygfA 6.3.3.2 - H ko:K01934 ko00670,ko01100,map00670,map01100 ko00000,ko00001,ko01000 5-formyltetrahydrofolate cyclo-ligase family
DBDEDFDM_00175 1.88e-51 - - - S - - - Putative regulatory protein
DBDEDFDM_00176 2.86e-139 - - - NO - - - SAF
DBDEDFDM_00177 2.87e-56 - - - - - - - -
DBDEDFDM_00178 0.0 - - - L - - - Superfamily I DNA and RNA helicases and helicase subunits
DBDEDFDM_00179 0.0 - - - T - - - Forkhead associated domain
DBDEDFDM_00181 5.13e-61 rplL - - J ko:K02935 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
DBDEDFDM_00182 5.06e-115 rplJ - - J ko:K02864 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
DBDEDFDM_00183 8.77e-237 xynB2 1.1.1.169 - E ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 ko00000,ko00001,ko00002,ko01000 lipolytic protein G-D-S-L family
DBDEDFDM_00184 0.0 - - - G - - - BNR repeat-like domain
DBDEDFDM_00186 5.92e-313 - - - S ko:K06901 - ko00000,ko02000 Permease family
DBDEDFDM_00188 1.37e-214 - - - S - - - Protein conserved in bacteria
DBDEDFDM_00189 1.29e-189 pstB 3.6.3.27 - P ko:K02036 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
DBDEDFDM_00190 6.61e-234 pstA - - P ko:K02038 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Phosphate transport system permease
DBDEDFDM_00191 8.51e-219 pstC - - P ko:K02037 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 probably responsible for the translocation of the substrate across the membrane
DBDEDFDM_00192 2.07e-218 pstS - - P ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex PstSACB involved in phosphate import
DBDEDFDM_00193 1.33e-165 regX3 - - KT ko:K07776 ko02020,map02020 ko00000,ko00001,ko00002,ko02022 Transcriptional regulatory protein, C terminal
DBDEDFDM_00194 1.05e-310 phoR 2.7.13.3 - T ko:K07636,ko:K07768 ko02020,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 His Kinase A (phosphoacceptor) domain
DBDEDFDM_00195 2.2e-160 mtnN 3.2.2.9 - E ko:K01243 ko00270,ko01100,ko01230,map00270,map01100,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DBDEDFDM_00196 3.6e-305 aroG 2.5.1.54 - E ko:K01626 ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024 ko00000,ko00001,ko00002,ko01000 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DBDEDFDM_00197 1.03e-139 - - - K - - - helix_turn_helix, Arsenical Resistance Operon Repressor
DBDEDFDM_00198 4.29e-310 - - - EGP - - - Major Facilitator Superfamily
DBDEDFDM_00199 2.79e-277 aroG 2.5.1.54 - E ko:K01626 ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024 ko00000,ko00001,ko00002,ko01000 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DBDEDFDM_00200 6.38e-235 - - - L - - - Excalibur calcium-binding domain
DBDEDFDM_00201 0.0 pepC2 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
DBDEDFDM_00202 4.06e-116 - - - D - - - nuclear chromosome segregation
DBDEDFDM_00203 2.23e-164 pcp 3.4.19.3 - O ko:K01304 - ko00000,ko01000,ko01002 Removes 5-oxoproline from various penultimate amino acid residues except L-proline
DBDEDFDM_00204 1.01e-182 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60 - I ko:K00991,ko:K21681 ko00040,ko00900,ko01100,ko01110,ko01130,map00040,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
DBDEDFDM_00205 1.58e-240 yfiH - - Q ko:K05810 - ko00000,ko01000 Multi-copper polyphenol oxidoreductase laccase
DBDEDFDM_00206 0.0 - - - O ko:K08303 ko05120,map05120 ko00000,ko00001,ko01000,ko01002 Peptidase family U32 C-terminal domain
DBDEDFDM_00207 1.45e-214 - - - L - - - Transposase and inactivated derivatives IS30 family
DBDEDFDM_00208 6.85e-214 - - - C - - - Oxidoreductase, aldo keto reductase family protein
DBDEDFDM_00209 1.26e-55 nrdH - - O ko:K06191 - ko00000 Glutaredoxin
DBDEDFDM_00210 5.76e-127 nrdI - - F ko:K03647 - ko00000 Probably involved in ribonucleotide reductase function
DBDEDFDM_00211 0.0 nrdE 1.17.4.1 - F ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DBDEDFDM_00213 5.98e-242 nrdF 1.17.4.1 - F ko:K00526 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DBDEDFDM_00214 3.03e-92 megL 4.4.1.11 - E ko:K01761 ko00270,ko00450,map00270,map00450 ko00000,ko00001,ko01000 Cys/Met metabolism PLP-dependent enzyme
DBDEDFDM_00215 0.0 - - - S - - - Predicted membrane protein (DUF2207)
DBDEDFDM_00216 1.85e-123 lemA - - S ko:K03744 - ko00000 LemA family
DBDEDFDM_00217 2.19e-56 - - - K - - - purine nucleotide biosynthetic process
DBDEDFDM_00218 3.32e-194 xylR - - K ko:K02529 - ko00000,ko03000 purine nucleotide biosynthetic process
DBDEDFDM_00219 0.0 pnp 2.7.7.8 - J ko:K00962 ko00230,ko00240,ko03018,map00230,map00240,map03018 ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
DBDEDFDM_00220 8.32e-56 rpsO - - J ko:K02956 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
DBDEDFDM_00221 3.14e-155 - - - - - - - -
DBDEDFDM_00222 0.0 - 3.2.1.35 - G ko:K01197 ko00531,ko01100,map00531,map01100 ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042 beta-N-acetylglucosaminidase
DBDEDFDM_00224 4.39e-209 birA 6.3.4.15 - H ko:K03524 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko01000,ko03000 Biotin/lipoate A/B protein ligase family
DBDEDFDM_00225 6.53e-127 acpS 2.7.8.7 - I ko:K00997 ko00770,map00770 ko00000,ko00001,ko01000 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
DBDEDFDM_00226 0.0 fas - - I ko:K11533 ko00061,ko01100,ko01212,ko04931,map00061,map01100,map01212,map04931 ko00000,ko00001,ko00002,ko01000,ko01004 Beta-ketoacyl synthase, C-terminal domain
DBDEDFDM_00227 0.0 pccB - - I - - - Carboxyl transferase domain
DBDEDFDM_00228 0.0 accC 6.3.4.14, 6.4.1.2, 6.4.1.3 - I ko:K11263 ko00061,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200,map01212 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthase L chain, ATP binding domain protein
DBDEDFDM_00229 2.14e-119 bioY - - S ko:K03523 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 BioY family
DBDEDFDM_00230 4.55e-194 birA 6.3.4.15 - H ko:K03524 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko01000,ko03000 Biotin/lipoate A/B protein ligase family
DBDEDFDM_00231 0.0 - - - - - - - -
DBDEDFDM_00232 8.27e-187 - - - QT - - - PucR C-terminal helix-turn-helix domain
DBDEDFDM_00233 3.84e-169 nucS - - L ko:K07503 - ko00000,ko01000 Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
DBDEDFDM_00234 1.39e-66 atpC - - C ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane
DBDEDFDM_00235 0.0 atpD 3.6.3.14 - C ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
DBDEDFDM_00236 2.73e-213 atpG - - C ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
DBDEDFDM_00237 0.0 atpA 3.6.3.14 - C ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko01000 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
DBDEDFDM_00238 2.81e-192 atpH - - C ko:K02109,ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DBDEDFDM_00239 7.5e-98 atpF - - C ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
DBDEDFDM_00240 1.21e-40 atpE - - C ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DBDEDFDM_00242 3.54e-188 atpB - - C ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 ko00000,ko00001,ko00002,ko00194,ko03110 it plays a direct role in the translocation of protons across the membrane
DBDEDFDM_00243 2.94e-265 metAA 2.3.1.46 - E ko:K00651 ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DBDEDFDM_00245 1.11e-59 - - - - - - - -
DBDEDFDM_00246 0.0 - - - K - - - RNA polymerase II activating transcription factor binding
DBDEDFDM_00247 0.0 glgE 2.4.99.16 GH13 G ko:K16147 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
DBDEDFDM_00248 1.13e-118 ppa 3.6.1.1 - C ko:K01507 ko00190,map00190 ko00000,ko00001,ko01000 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
DBDEDFDM_00250 2.85e-134 mntP - - P - - - Probably functions as a manganese efflux pump
DBDEDFDM_00251 4.6e-169 - - - - - - - -
DBDEDFDM_00252 3.61e-171 glnR - - KT - - - Transcriptional regulatory protein, C terminal
DBDEDFDM_00253 6.93e-161 nth 4.2.99.18 - L ko:K10773 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DBDEDFDM_00254 0.0 - - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding proteins, family 5 Middle
DBDEDFDM_00255 0.0 valS 6.1.1.9 - J ko:K01873 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
DBDEDFDM_00256 0.0 - - - S - - - domain protein
DBDEDFDM_00257 9.37e-96 tyrA 5.4.99.5 - E ko:K04092 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Chorismate mutase type II
DBDEDFDM_00258 1.7e-103 lrp_3 - - K ko:K03719 - ko00000,ko03000,ko03036 helix_turn_helix ASNC type
DBDEDFDM_00259 5.05e-299 - 2.6.1.1, 2.6.1.2, 2.6.1.66 - E ko:K00812,ko:K08969,ko:K10907,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase class I and II
DBDEDFDM_00260 6.01e-279 rho - - K ko:K03628 ko03018,map03018 ko00000,ko00001,ko03019,ko03021 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
DBDEDFDM_00261 6.65e-18 - - - L - - - Transposase
DBDEDFDM_00262 1.2e-131 - - - K - - - cell envelope-related transcriptional attenuator
DBDEDFDM_00264 0.0 - - - - - - - -
DBDEDFDM_00265 4.09e-222 - - - S ko:K21688 - ko00000 G5
DBDEDFDM_00266 2.57e-78 trxA 1.8.1.9 - O ko:K00384,ko:K03671 ko00450,ko04621,ko05418,map00450,map04621,map05418 ko00000,ko00001,ko01000,ko03110 Belongs to the thioredoxin family
DBDEDFDM_00267 8.16e-154 - - - F - - - Domain of unknown function (DUF4916)
DBDEDFDM_00268 1.46e-205 - - - I - - - Alpha/beta hydrolase family
DBDEDFDM_00270 0.0 - - - S - - - L,D-transpeptidase catalytic domain
DBDEDFDM_00271 2.17e-93 gcvH - - E ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 ko00000,ko00001,ko00002 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
DBDEDFDM_00272 0.0 - - - S - - - Uncharacterized conserved protein (DUF2183)
DBDEDFDM_00273 0.0 ptrB 3.4.21.83 - E ko:K01354 ko05142,ko05143,map05142,map05143 ko00000,ko00001,ko01000,ko01002 Peptidase, S9A B C family, catalytic domain protein
DBDEDFDM_00274 3.62e-245 leuB 1.1.1.85 - CE ko:K00052 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
DBDEDFDM_00275 8.97e-151 lplA 6.3.1.20 - H ko:K03800 ko00785,ko01100,map00785,map01100 ko00000,ko00001,ko01000 Biotin/lipoate A/B protein ligase family
DBDEDFDM_00276 4.67e-173 crp - - K ko:K10914 ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111 ko00000,ko00001,ko03000 helix_turn_helix, cAMP Regulatory protein
DBDEDFDM_00277 0.0 pon1 - - M - - - Transglycosylase
DBDEDFDM_00278 1.5e-277 namA - - C - - - NADH:flavin oxidoreductase / NADH oxidase family
DBDEDFDM_00279 4.9e-288 pyrD 1.3.5.2, 1.3.98.1 - F ko:K00226,ko:K00254 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
DBDEDFDM_00280 1.2e-179 - - - K - - - DeoR C terminal sensor domain
DBDEDFDM_00281 0.0 galT 2.7.7.12 - C ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 ko00000,ko00001,ko00002,ko01000 Galactose-1-phosphate uridyl transferase, N-terminal domain
DBDEDFDM_00282 2.4e-296 galK 2.7.1.6, 2.7.7.12 - G ko:K00849,ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GHMP kinase family. GalK subfamily
DBDEDFDM_00283 1.32e-308 - - - EGP - - - Sugar (and other) transporter
DBDEDFDM_00284 3.23e-58 - - - T ko:K07166 - ko00000 Belongs to the UPF0237 family
DBDEDFDM_00285 0.0 - - - S ko:K09157 - ko00000 UPF0210 protein
DBDEDFDM_00286 2.18e-139 - - - - - - - -
DBDEDFDM_00288 1.51e-155 spoU 2.1.1.207 - J ko:K03216 - ko00000,ko01000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
DBDEDFDM_00289 3.03e-77 - 3.2.1.35 - G ko:K01197 ko00531,ko01100,map00531,map01100 ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042 Putative cell wall binding repeat
DBDEDFDM_00290 1.53e-38 exsH 3.2.1.178, 3.2.1.18, 3.2.1.52 GH16,GH20,GH33 G ko:K01186,ko:K12373,ko:K20830 ko00511,ko00513,ko00520,ko00531,ko00600,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00600,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko02042,ko03110 xyloglucan:xyloglucosyl transferase activity
DBDEDFDM_00291 3.15e-236 mutY - - L ko:K03575 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 FES
DBDEDFDM_00292 2.02e-146 - - - - - - - -
DBDEDFDM_00293 0.0 rpoB 2.7.7.6 - K ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DBDEDFDM_00294 0.0 rpoC 2.7.7.6 - K ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DBDEDFDM_00295 6.53e-125 - - - T - - - Forkhead associated domain
DBDEDFDM_00296 6.58e-100 - - - B - - - Belongs to the OprB family
DBDEDFDM_00297 1.58e-209 - 3.1.3.16 - T ko:K20074 - ko00000,ko01000,ko01009 Sigma factor PP2C-like phosphatases
DBDEDFDM_00298 0.0 - - - E - - - Transglutaminase-like superfamily
DBDEDFDM_00299 9.84e-297 - - - S - - - Protein of unknown function DUF58
DBDEDFDM_00300 0.0 - - - S ko:K03924 - ko00000,ko01000 ATPase family associated with various cellular activities (AAA)
DBDEDFDM_00301 4.07e-145 - - - S - - - Fibronectin type 3 domain
DBDEDFDM_00302 9.04e-300 - - - S - - - Fibronectin type 3 domain
DBDEDFDM_00303 0.0 - - - S - - - Fibronectin type 3 domain
DBDEDFDM_00304 0.0 pknK 2.7.11.1 - KLT ko:K12132 - ko00000,ko01000,ko01001 Protein tyrosine kinase
DBDEDFDM_00305 0.0 - - - L - - - PD-(D/E)XK nuclease superfamily
DBDEDFDM_00306 0.0 uvrD2 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 Belongs to the helicase family. UvrD subfamily
DBDEDFDM_00307 6.47e-209 - - - K - - - -acetyltransferase
DBDEDFDM_00308 0.0 - - - G - - - Major Facilitator Superfamily
DBDEDFDM_00309 6.14e-87 gsiA - - P ko:K02031,ko:K02032,ko:K12371,ko:K13892 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
DBDEDFDM_00310 1.03e-55 - - - L - - - Belongs to the N(4) N(6)-methyltransferase family
DBDEDFDM_00311 1.87e-12 - - - L - - - Belongs to the N(4) N(6)-methyltransferase family
DBDEDFDM_00312 3.22e-33 - - - L ko:K07473 - ko00000,ko02048 RelB antitoxin
DBDEDFDM_00313 5.9e-76 - - - L - - - Transposase
DBDEDFDM_00314 2.35e-169 dapB 1.17.1.8 - E ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
DBDEDFDM_00315 6.97e-208 dapA 4.3.3.7 - E ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DBDEDFDM_00316 0.0 rnj - - J ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DBDEDFDM_00317 0.0 pepN 3.4.11.2 - E ko:K01256,ko:K08776 ko00480,ko01100,map00480,map01100 ko00000,ko00001,ko01000,ko01002 Peptidase family M1 domain
DBDEDFDM_00318 0.0 vpr - - O - - - Subtilase family
DBDEDFDM_00319 0.0 glmM 5.4.2.10 - G ko:K03431 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko01000 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DBDEDFDM_00320 6.43e-160 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
DBDEDFDM_00321 0.0 - - - S - - - zinc finger
DBDEDFDM_00322 4.28e-144 vsr - - L ko:K07458 - ko00000,ko01000,ko03400 May nick specific sequences that contain T G mispairs resulting from m5C-deamination
DBDEDFDM_00323 7.65e-293 aspB 2.6.1.1 - E ko:K00812 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase class-V
DBDEDFDM_00324 9.17e-201 ppx1 3.6.1.11, 3.6.1.40 - FP ko:K01524 ko00230,map00230 ko00000,ko00001,ko01000 Ppx/GppA phosphatase family
DBDEDFDM_00325 2.66e-168 tmp1 - - S - - - Domain of unknown function (DUF4391)
DBDEDFDM_00326 8.74e-193 thiF 2.7.7.73, 2.7.7.80, 2.8.1.11 - H ko:K03148,ko:K21147 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000 ThiF family
DBDEDFDM_00327 0.0 - - - OP - - - Sulfurtransferase TusA
DBDEDFDM_00328 1.58e-232 - 3.2.2.1 - F ko:K01239 ko00230,ko00760,ko01100,map00230,map00760,map01100 ko00000,ko00001,ko01000 Inosine-uridine preferring nucleoside hydrolase
DBDEDFDM_00329 6.61e-06 - - - K - - - Bacterial regulatory proteins, lacI family
DBDEDFDM_00331 3.17e-260 - - - S ko:K18353 ko01502,ko02020,map01502,map02020 ko00000,ko00001,ko00002,ko01504 Endonuclease/Exonuclease/phosphatase family
DBDEDFDM_00332 1.47e-56 xseB 3.1.11.6 - L ko:K03602 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
DBDEDFDM_00333 0.0 xseA 3.1.11.6 - L ko:K03601 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
DBDEDFDM_00334 0.0 nrdD 1.1.98.6 - F ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Anaerobic ribonucleoside-triphosphate reductase
DBDEDFDM_00335 5.91e-179 nrdG 1.97.1.4 - O ko:K04068 - ko00000,ko01000 Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DBDEDFDM_00337 0.0 hgdC - - I - - - CoA enzyme activase uncharacterised domain (DUF2229)
DBDEDFDM_00338 2.63e-211 - - - - - - - -
DBDEDFDM_00339 0.0 egtA 6.3.2.2 - H ko:K01919 ko00270,ko00480,ko01100,map00270,map00480,map01100 ko00000,ko00001,ko00002,ko01000 Glutamate-cysteine ligase family 2(GCS2)
DBDEDFDM_00340 0.0 - - - M - - - Parallel beta-helix repeats
DBDEDFDM_00341 6.07e-116 - - - K - - - MarR family
DBDEDFDM_00342 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter, ATP-binding protein
DBDEDFDM_00343 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter transmembrane region
DBDEDFDM_00344 2.26e-220 - - - S - - - Patatin-like phospholipase
DBDEDFDM_00345 5.49e-196 murI 5.1.1.3 - M ko:K01776 ko00471,ko01100,map00471,map01100 ko00000,ko00001,ko01000,ko01011 Provides the (R)-glutamate required for cell wall biosynthesis
DBDEDFDM_00346 7.32e-216 dapF 5.1.1.7 - E ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
DBDEDFDM_00347 4.82e-147 - - - S - - - Vitamin K epoxide reductase
DBDEDFDM_00348 2.09e-212 PPA1328 3.1.3.97, 3.1.4.57 - S ko:K07053,ko:K20859 ko00440,map00440 ko00000,ko00001,ko01000 DNA polymerase alpha chain like domain
DBDEDFDM_00349 9.31e-44 - - - S - - - Protein of unknown function (DUF3107)
DBDEDFDM_00350 0.0 mphA - - S - - - Aminoglycoside phosphotransferase
DBDEDFDM_00351 0.0 uvrD2 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
DBDEDFDM_00352 0.0 - - - S - - - Zincin-like metallopeptidase
DBDEDFDM_00353 6.85e-192 sdrC - - T ko:K07177 ko02024,map02024 ko00000,ko00001,ko01002 Belongs to the peptidase S16 family
DBDEDFDM_00354 6.43e-86 - - - S - - - Protein of unknown function (DUF3052)
DBDEDFDM_00355 1.88e-246 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
DBDEDFDM_00356 1.52e-81 - - - S - - - Thiamine-binding protein
DBDEDFDM_00357 7.27e-211 thiD 2.7.1.49, 2.7.4.7 - H ko:K00941 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Phosphomethylpyrimidine kinase
DBDEDFDM_00358 8.07e-290 - - - O ko:K13525 ko04141,ko05134,map04141,map05134 ko00000,ko00001,ko00002,ko03019,ko04131,ko04147 AAA domain (Cdc48 subfamily)
DBDEDFDM_00360 0.0 - - - L - - - Recombinase zinc beta ribbon domain
DBDEDFDM_00361 1.45e-300 - - - K - - - Psort location Cytoplasmic, score 8.87
DBDEDFDM_00362 2.58e-146 - - - - - - - -
DBDEDFDM_00363 1.63e-231 - - - P - - - FtsX-like permease family
DBDEDFDM_00364 2.86e-149 - - - V - - - ATPases associated with a variety of cellular activities
DBDEDFDM_00365 1.35e-122 - - - K - - - WHG domain
DBDEDFDM_00366 1.58e-157 - - - S - - - MobA MobL family protein
DBDEDFDM_00368 1.82e-59 - - - S - - - Psort location Cytoplasmic, score
DBDEDFDM_00369 1.35e-46 - - - L - - - Excisionase from transposon Tn916
DBDEDFDM_00370 3.99e-141 - - - K - - - Helix-turn-helix domain
DBDEDFDM_00371 1.93e-316 - - - L - - - Phage integrase family
DBDEDFDM_00372 0.0 thiC 4.1.99.17 - H ko:K03147 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
DBDEDFDM_00374 2.05e-201 thiM 2.7.1.50 - H ko:K00878 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
DBDEDFDM_00375 0.0 - 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Domain of unknown function (DUF4982)
DBDEDFDM_00376 0.0 glyQS 6.1.1.14 - J ko:K01880 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of glycine to tRNA(Gly)
DBDEDFDM_00377 6.84e-315 dus - - J - - - Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DBDEDFDM_00378 3.27e-294 ftsZ - - D ko:K03531 ko04112,map04112 ko00000,ko00001,ko02048,ko03036,ko04812 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DBDEDFDM_00379 9.4e-105 sepF - - D ko:K09772 - ko00000,ko03036 Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
DBDEDFDM_00380 1.35e-56 - - - S ko:K02221 - ko00000,ko02044 YGGT family
DBDEDFDM_00381 1.65e-191 - - - V - - - DivIVA protein
DBDEDFDM_00382 4.6e-148 lspA 3.4.23.36 - MU ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 This protein specifically catalyzes the removal of signal peptides from prolipoproteins
DBDEDFDM_00383 1.89e-225 rluD 5.4.99.23 - J ko:K06180 - ko00000,ko01000,ko03009 Responsible for synthesis of pseudouridine from uracil
DBDEDFDM_00385 1.25e-82 - - - - - - - -
DBDEDFDM_00386 2.15e-219 dapD 2.3.1.117 - E ko:K00674 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
DBDEDFDM_00387 5.51e-263 prfB - - J ko:K02836 - ko00000,ko03012 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
DBDEDFDM_00388 5.52e-304 ftsE - - D ko:K09812 ko02010,map02010 ko00000,ko00001,ko00002,ko02000,ko03036 Cell division ATP-binding protein FtsE
DBDEDFDM_00389 3.55e-283 - - - D ko:K21471 - ko00000,ko01000,ko01002,ko01011 CHAP domain protein
DBDEDFDM_00390 1.38e-103 smpB - - J ko:K03664 - ko00000 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
DBDEDFDM_00391 1.84e-186 - 5.4.99.28, 5.4.99.29 - J ko:K06177 - ko00000,ko01000,ko03009,ko03016 RNA pseudouridylate synthase
DBDEDFDM_00392 1.25e-79 - - - - - - - -
DBDEDFDM_00394 6.67e-312 - - - NU - - - Tfp pilus assembly protein FimV
DBDEDFDM_00395 2.93e-280 dxr 1.1.1.267 - I ko:K00099 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
DBDEDFDM_00396 5.66e-298 ispG 1.17.7.1, 1.17.7.3 - I ko:K03526 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
DBDEDFDM_00397 0.0 - - - I - - - acetylesterase activity
DBDEDFDM_00398 4.13e-182 recO - - L ko:K03584 ko03440,map03440 ko00000,ko00001,ko03400 Involved in DNA repair and RecF pathway recombination
DBDEDFDM_00399 2.53e-198 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 - H ko:K00806,ko:K14215,ko:K21273 ko00900,ko01110,map00900,map01110 ko00000,ko00001,ko01000,ko01006 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
DBDEDFDM_00400 5.47e-201 - - - S - - - Domain of unknown function (DUF1963)
DBDEDFDM_00401 2.66e-43 fosC 3.2.1.26 GH32 G ko:K01193 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Belongs to the glycosyl hydrolase 32 family
DBDEDFDM_00402 0.0 dnaE 2.7.7.7 - L ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III alpha subunit
DBDEDFDM_00403 3.07e-169 - - - S - - - zinc-ribbon domain
DBDEDFDM_00404 1.9e-62 - - - J ko:K07574 - ko00000,ko03009 CRS1_YhbY
DBDEDFDM_00405 0.0 - 4.2.1.53 - S ko:K10254 - ko00000,ko01000 MCRA family
DBDEDFDM_00407 5e-05 dnaA - - L ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
DBDEDFDM_00409 1.02e-257 - - - K - - - WYL domain
DBDEDFDM_00410 1.35e-199 - - - S - - - Aldo/keto reductase family
DBDEDFDM_00411 5.19e-222 dkgV - - C - - - Aldo/keto reductase family
DBDEDFDM_00412 7.17e-99 - - - S - - - Domain of unknown function (DUF4186)
DBDEDFDM_00415 4.44e-231 - - - S - - - Protein conserved in bacteria
DBDEDFDM_00416 0.0 hisD 1.1.1.23 - E ko:K00013 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
DBDEDFDM_00417 1.85e-285 hisC 2.6.1.9 - E ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
DBDEDFDM_00418 1.08e-145 hisB 3.1.3.15, 4.2.1.19 - E ko:K01089,ko:K01693 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Imidazoleglycerol-phosphate dehydratase
DBDEDFDM_00419 5.28e-151 - - - - - - - -
DBDEDFDM_00420 3.31e-157 hisH - - E ko:K02501 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
DBDEDFDM_00421 4.81e-167 hisA 5.3.1.16, 5.3.1.24 - E ko:K01814,ko:K01817 ko00340,ko00400,ko01100,ko01110,ko01130,ko01230,map00340,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Histidine biosynthesis protein
DBDEDFDM_00422 3.71e-303 - - - S - - - Uncharacterized protein conserved in bacteria (DUF2252)
DBDEDFDM_00423 0.0 glnA2 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 glutamine synthetase
DBDEDFDM_00424 1.87e-178 - - - S - - - Domain of unknown function (DUF5067)
DBDEDFDM_00425 2.45e-61 - - - - - - - -
DBDEDFDM_00426 2.44e-181 nfrA - - C - - - Nitroreductase family
DBDEDFDM_00427 2.88e-89 - - - S - - - Protein of unknown function (DUF4235)
DBDEDFDM_00428 1.84e-180 gpm2 3.1.3.73 - G ko:K02226 ko00860,ko01100,map00860,map01100 ko00000,ko00001,ko00002,ko01000 Phosphoglycerate mutase family
DBDEDFDM_00429 5.54e-243 - - - K - - - Psort location Cytoplasmic, score
DBDEDFDM_00430 0.0 strK 3.1.3.1, 3.1.3.39 - P ko:K01077,ko:K04342 ko00521,ko00730,ko00790,ko01100,ko01130,ko02020,map00521,map00730,map00790,map01100,map01130,map02020 ko00000,ko00001,ko00002,ko00537,ko01000,ko04147 Alkaline phosphatase homologues
DBDEDFDM_00431 0.0 dnaK - - O ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Heat shock 70 kDa protein
DBDEDFDM_00432 8.46e-88 grpE - - O ko:K03687 - ko00000,ko03029,ko03110 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
DBDEDFDM_00434 3.17e-235 dnaJ - - O ko:K03686,ko:K05516 - ko00000,ko03029,ko03036,ko03110 DnaJ molecular chaperone homology domain
DBDEDFDM_00435 6.42e-112 hspR - - K ko:K13640 - ko00000,ko03000 transcriptional regulator, MerR family
DBDEDFDM_00436 0.0 - 3.2.1.18 GH33 G ko:K01186 ko00511,ko00600,ko04142,map00511,map00600,map04142 ko00000,ko00001,ko01000,ko02042 BNR repeat-like domain
DBDEDFDM_00437 0.0 - 3.2.1.18 GH33 G ko:K01186 ko00511,ko00600,ko04142,map00511,map00600,map04142 ko00000,ko00001,ko01000,ko02042 BNR Asp-box repeat
DBDEDFDM_00438 2.46e-173 - - - S - - - HAD hydrolase, family IA, variant 3
DBDEDFDM_00440 1.82e-162 dedA1 - - S ko:K03975 - ko00000 SNARE associated Golgi protein
DBDEDFDM_00441 4.41e-220 rsmI 2.1.1.198 - H ko:K07056 - ko00000,ko01000,ko03009 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
DBDEDFDM_00442 1.6e-83 - - - - - - - -
DBDEDFDM_00443 7.68e-170 - - - - - - - -
DBDEDFDM_00444 0.0 metG 6.1.1.10 - J ko:K01874 ko00450,ko00970,map00450,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DBDEDFDM_00445 1.29e-96 - - - K - - - Transcriptional regulator
DBDEDFDM_00447 8.84e-79 - - - G ko:K16210 - ko00000,ko02000 MFS/sugar transport protein
DBDEDFDM_00448 8e-161 - - - G ko:K16210 - ko00000,ko02000 MFS/sugar transport protein
DBDEDFDM_00449 3.58e-20 - - - G ko:K16210 - ko00000,ko02000 MFS/sugar transport protein
DBDEDFDM_00450 4.51e-236 tatD - - L ko:K03424 - ko00000,ko01000 TatD related DNase
DBDEDFDM_00451 0.0 kup - - P ko:K03549 - ko00000,ko02000 Transport of potassium into the cell
DBDEDFDM_00453 3.34e-211 - - - S - - - Glutamine amidotransferase domain
DBDEDFDM_00454 1.98e-177 - - - T ko:K06950 - ko00000 HD domain
DBDEDFDM_00455 8.04e-270 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
DBDEDFDM_00456 0.0 - - - V - - - ABC transporter permease
DBDEDFDM_00457 0.0 - - - H - - - Protein of unknown function (DUF4012)
DBDEDFDM_00458 3.82e-35 - - GT2 M ko:K20534 - ko00000,ko01000,ko01005,ko02000 Glycosyl transferase family 2
DBDEDFDM_00459 0.0 - - - S - - - Psort location Cytoplasmic, score 8.87
DBDEDFDM_00460 1.93e-211 thiG 2.8.1.10 - H ko:K03149 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
DBDEDFDM_00461 2.41e-37 thiS - - H ko:K03154 ko04122,map04122 ko00000,ko00001 ThiS family
DBDEDFDM_00462 0.000146 - - - - - - - -
DBDEDFDM_00463 0.0 - - - - - - - -
DBDEDFDM_00464 9.1e-268 - - - S - - - Glycosyltransferase, group 2 family protein
DBDEDFDM_00465 6.41e-77 ureD - - O ko:K03190 - ko00000 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
DBDEDFDM_00466 1.86e-63 cbiM - - P ko:K02007 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 PDGLE domain
DBDEDFDM_00467 5.26e-130 - - - - - - - -
DBDEDFDM_00468 1.57e-282 mutT 3.6.1.55 - LT ko:K03574 - ko00000,ko01000,ko03400 Phosphoglycerate mutase family
DBDEDFDM_00469 0.0 ppk 2.7.4.1 - P ko:K00937 ko00190,ko03018,map00190,map03018 ko00000,ko00001,ko01000,ko03019 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
DBDEDFDM_00471 1.34e-196 - - - D - - - bacterial-type flagellum organization
DBDEDFDM_00472 6.74e-244 cpaF - - U ko:K02283 - ko00000,ko02035,ko02044 Type II IV secretion system protein
DBDEDFDM_00473 2.62e-157 - - - U ko:K12510 - ko00000,ko02044 Type ii secretion system
DBDEDFDM_00475 1.3e-20 - - - NU - - - Type II secretion system (T2SS), protein F
DBDEDFDM_00476 3.96e-55 - - - S - - - Protein of unknown function (DUF4244)
DBDEDFDM_00477 1.28e-73 - - - U - - - TadE-like protein
DBDEDFDM_00478 3.62e-73 - - - S - - - TIGRFAM helicase secretion neighborhood TadE-like protein
DBDEDFDM_00479 1.61e-274 - 2.7.1.107 - I ko:K07029 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko01000 Diacylglycerol kinase catalytic domain protein
DBDEDFDM_00480 0.0 dnaX 2.7.7.7 - L ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III subunit gamma tau
DBDEDFDM_00481 1.21e-142 recR - - L ko:K06187 ko03440,map03440 ko00000,ko00001,ko03400 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
DBDEDFDM_00482 2.29e-176 ask 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Amino acid kinase family
DBDEDFDM_00483 1.42e-126 ask 2.7.2.4 - E ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 ACT domain
DBDEDFDM_00485 7.91e-271 asd 1.2.1.11 - E ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DBDEDFDM_00486 1.77e-148 - - - - - - - -
DBDEDFDM_00487 0.0 - 2.7.11.1 - S ko:K12132 - ko00000,ko01000,ko01001 PASTA domain
DBDEDFDM_00488 2.76e-18 - 2.7.11.1 - S ko:K12132 - ko00000,ko01000,ko01001 PASTA domain
DBDEDFDM_00489 0.0 - - - S - - - Calcineurin-like phosphoesterase
DBDEDFDM_00490 0.0 leuA 2.3.3.13 - E ko:K01649 ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
DBDEDFDM_00491 0.0 pbp5 - - M - - - Transglycosylase
DBDEDFDM_00492 6.29e-296 glf 5.4.99.9 - M ko:K01854 ko00052,ko00520,map00052,map00520 ko00000,ko00001,ko01000 UDP-galactopyranose mutase
DBDEDFDM_00493 9.41e-175 - - - S ko:K11068 - ko00000,ko02042 Haemolysin-III related
DBDEDFDM_00494 0.0 - - - M - - - PA domain
DBDEDFDM_00495 1.95e-252 - - - I - - - PAP2 superfamily
DBDEDFDM_00496 0.0 topA 5.99.1.2 - L ko:K03168 - ko00000,ko01000,ko03032,ko03400 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DBDEDFDM_00497 2.96e-158 tmk 2.7.4.9 - F ko:K00943 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
DBDEDFDM_00498 3.65e-273 holB 2.7.7.7 - L ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III
DBDEDFDM_00499 1.14e-256 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
DBDEDFDM_00500 1.47e-50 hpr - - G ko:K11189 - ko00000,ko02000 PTS HPr component phosphorylation site
DBDEDFDM_00501 0.0 ptsI 2.7.3.9 - G ko:K08483 ko02060,map02060 ko00000,ko00001,ko01000,ko02000 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DBDEDFDM_00502 1.42e-75 - - - S - - - Fic/DOC family
DBDEDFDM_00503 2.02e-67 - - - S - - - Fic/DOC family
DBDEDFDM_00504 1.38e-254 - 2.7.1.180 - H ko:K03734 - ko00000,ko01000 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
DBDEDFDM_00505 8.33e-31 - - - G - - - MFS/sugar transport protein
DBDEDFDM_00506 0.0 - - - P ko:K07243 - ko00000,ko02000 Iron permease FTR1 family
DBDEDFDM_00507 2.38e-150 - - - P ko:K07230 - ko00000,ko02000 Fe2+ transport protein
DBDEDFDM_00508 2.49e-295 - - - S - - - Predicted membrane protein (DUF2318)
DBDEDFDM_00509 2.27e-289 - - - V ko:K02004 - ko00000,ko00002,ko02000 ABC transporter permease
DBDEDFDM_00510 4.97e-276 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
DBDEDFDM_00511 7.76e-191 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
DBDEDFDM_00512 7.37e-99 - - - S - - - FMN_bind
DBDEDFDM_00513 1.5e-167 - - - K ko:K03489,ko:K03710 - ko00000,ko03000 UTRA
DBDEDFDM_00514 3.37e-88 - - - S - - - haloacid dehalogenase-like hydrolase
DBDEDFDM_00515 0.0 - - - G ko:K02761 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko02000 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DBDEDFDM_00516 5.95e-65 - 2.7.1.196, 2.7.1.205 - G ko:K02760 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
DBDEDFDM_00517 1.29e-66 - 2.7.1.196, 2.7.1.205 - G ko:K02759 ko00500,ko02060,map00500,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIA subunit
DBDEDFDM_00518 0.0 - 3.2.1.86 GT1 G ko:K01223 ko00010,ko00500,map00010,map00500 ko00000,ko00001,ko01000 Glycosyl hydrolase family 1
DBDEDFDM_00519 3.82e-47 - - - Q - - - phosphatase activity
DBDEDFDM_00520 2.24e-103 - - - - - - - -
DBDEDFDM_00521 2.27e-307 - - - S - - - Putative ABC-transporter type IV
DBDEDFDM_00522 1.72e-209 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
DBDEDFDM_00524 8.21e-57 - - - L ko:K07483 - ko00000 Psort location Cytoplasmic, score 8.87
DBDEDFDM_00525 5.75e-155 - - - L ko:K07483 - ko00000 Integrase core domain
DBDEDFDM_00527 6.57e-106 - - - K - - - Winged helix DNA-binding domain
DBDEDFDM_00528 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter, ATP-binding protein
DBDEDFDM_00529 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter transmembrane region
DBDEDFDM_00530 6.69e-47 - - - - - - - -
DBDEDFDM_00531 1.53e-110 - - - P ko:K16785 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Cobalt transport protein
DBDEDFDM_00533 0.0 - - - E ko:K08659 - ko00000,ko01000,ko01002 Peptidase family C69
DBDEDFDM_00534 0.0 - - - S - - - Glycosyl hydrolases related to GH101 family, GH129
DBDEDFDM_00535 1.96e-254 - 2.7.8.12 - M ko:K09809 - ko00000,ko01000 Glycosyltransferase like family 2
DBDEDFDM_00536 1.17e-172 icaR - - K - - - Bacterial regulatory proteins, tetR family
DBDEDFDM_00537 2.48e-276 ftsY - - U ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
DBDEDFDM_00538 6.01e-305 amt - - U ko:K03320 - ko00000,ko02000 Ammonium Transporter Family
DBDEDFDM_00539 2.56e-72 glnB - - K ko:K04751 ko02020,map02020 ko00000,ko00001 Nitrogen regulatory protein P-II
DBDEDFDM_00540 0.0 glnD 2.7.7.59 - O ko:K00990 ko02020,map02020 ko00000,ko00001,ko01000 Nucleotidyltransferase domain
DBDEDFDM_00541 0.0 dinF - - V - - - MatE
DBDEDFDM_00542 0.0 dnaB 3.6.4.12 - L ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Participates in initiation and elongation during chromosome replication
DBDEDFDM_00543 0.0 murE - - M - - - Domain of unknown function (DUF1727)
DBDEDFDM_00544 1.02e-181 cobQ2 - - S ko:K07009 - ko00000 CobB/CobQ-like glutamine amidotransferase domain
DBDEDFDM_00545 3.15e-44 - - - S - - - granule-associated protein
DBDEDFDM_00546 0.0 - - - S ko:K03688 - ko00000 ABC1 family
DBDEDFDM_00547 0.0 - 3.6.3.4, 3.6.3.54 - P ko:K01533,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 E1-E2 ATPase
DBDEDFDM_00548 5.65e-57 csoR - - S ko:K21600 - ko00000,ko03000 Metal-sensitive transcriptional repressor
DBDEDFDM_00549 2.51e-298 rmuC - - S ko:K09760 - ko00000 RmuC family
DBDEDFDM_00550 6.07e-165 pyrE1 - - F - - - Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
DBDEDFDM_00551 5.33e-211 trmH 2.1.1.34 - J ko:K00556 - ko00000,ko01000,ko03016 RNA methyltransferase TrmH family
DBDEDFDM_00552 4.24e-78 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
DBDEDFDM_00553 7.84e-81 - - - V ko:K01990 - ko00000,ko00002,ko02000 ABC transporter
DBDEDFDM_00554 9.56e-64 gatC 6.3.5.6, 6.3.5.7 - J ko:K02435 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DBDEDFDM_00555 0.0 gatA 6.3.5.6, 6.3.5.7 - F ko:K02433 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
DBDEDFDM_00556 0.0 gatB 6.3.5.6, 6.3.5.7 - J ko:K02434 ko00970,ko01100,map00970,map01100 ko00000,ko00001,ko01000,ko03029 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DBDEDFDM_00557 3.24e-250 - - - J - - - Acetyltransferase (GNAT) domain
DBDEDFDM_00558 6.51e-69 - - - S - - - Protein of unknown function (DUF2469)
DBDEDFDM_00560 0.0 - - - H - - - Flavin containing amine oxidoreductase
DBDEDFDM_00562 1.84e-37 - - - L - - - IstB-like ATP binding protein
DBDEDFDM_00563 6.07e-100 - - - S - - - CRISPR-associated protein (Cas_Csn2)
DBDEDFDM_00564 6.36e-160 cas1 - - L ko:K15342 - ko00000,ko02048,ko03400 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
DBDEDFDM_00565 0.0 cas9 - - L ko:K09952 - ko00000,ko01000,ko02048 CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
DBDEDFDM_00566 2.72e-20 - - - - - - - -
DBDEDFDM_00567 0.0 - - - - - - - -
DBDEDFDM_00568 0.0 hsdM 2.1.1.72 - V ko:K03427 - ko00000,ko01000,ko02048 modification (methylase) protein of type I restriction-modification system K03427
DBDEDFDM_00570 2.3e-293 - 3.1.21.3 - V ko:K01154 - ko00000,ko01000,ko02048 Type I restriction modification DNA specificity domain
DBDEDFDM_00571 2.4e-230 - - - V - - - Abi-like protein
DBDEDFDM_00572 0.0 hsdR 3.1.21.3 - V ko:K01153 - ko00000,ko01000,ko02048 Subunit R is required for both nuclease and ATPase activities, but not for modification
DBDEDFDM_00573 4.68e-78 - - - S - - - Bacterial mobilisation protein (MobC)
DBDEDFDM_00574 0.0 - - - U - - - Relaxase/Mobilisation nuclease domain
DBDEDFDM_00575 6.29e-135 - - - - - - - -
DBDEDFDM_00578 0.0 intA - - L - - - Phage integrase, N-terminal SAM-like domain
DBDEDFDM_00580 4.45e-21 - - - - - - - -
DBDEDFDM_00581 1.19e-130 - - - M - - - Belongs to the glycosyl hydrolase 30 family
DBDEDFDM_00582 3.12e-244 - - - C - - - Aldo/keto reductase family
DBDEDFDM_00583 7.47e-123 - - - K - - - helix_turn_helix multiple antibiotic resistance protein
DBDEDFDM_00584 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter, ATP-binding protein
DBDEDFDM_00585 0.0 - - - V ko:K06147 - ko00000,ko02000 ABC transporter transmembrane region
DBDEDFDM_00586 0.0 - 3.2.1.51 GH95 G ko:K15923 ko00511,map00511 ko00000,ko00001,ko01000 Glycosyl hydrolase family 65, N-terminal domain
DBDEDFDM_00587 3.03e-139 - - - S ko:K06910 - ko00000 Phosphatidylethanolamine-binding protein
DBDEDFDM_00588 0.0 pepD - - E ko:K08659 - ko00000,ko01000,ko01002 Peptidase family C69
DBDEDFDM_00589 0.0 fhs 6.3.4.3 - F ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Formate-tetrahydrofolate ligase
DBDEDFDM_00590 1.58e-81 - - - S - - - Macrophage migration inhibitory factor (MIF)
DBDEDFDM_00591 1.24e-126 - - - S - - - GtrA-like protein
DBDEDFDM_00592 0.0 - - - EGP - - - Major Facilitator Superfamily
DBDEDFDM_00593 9.49e-163 - - - G - - - Phosphoglycerate mutase family
DBDEDFDM_00594 2.07e-193 - - - - - - - -
DBDEDFDM_00595 4.99e-179 - - - P - - - Binding-protein-dependent transport system inner membrane component
DBDEDFDM_00596 5.05e-258 - - - P - - - NMT1/THI5 like
DBDEDFDM_00597 2.24e-157 - - - S - - - HAD hydrolase, family IA, variant 3
DBDEDFDM_00599 0.0 gltX 6.1.1.17 - J ko:K01885 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DBDEDFDM_00600 2.8e-122 - - - S ko:K07133 - ko00000 Domain of unknown function (DUF4143)
DBDEDFDM_00601 8.93e-84 - - - S ko:K07133 - ko00000 Domain of unknown function (DUF4143)
DBDEDFDM_00604 9.69e-317 - - - S - - - Calcineurin-like phosphoesterase
DBDEDFDM_00605 1.59e-179 ltbR - - K - - - Transcriptional regulator, IclR family, C-terminal domain protein
DBDEDFDM_00606 0.0 leuC 4.2.1.33, 4.2.1.35 - E ko:K01703 ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
DBDEDFDM_00607 3.31e-171 leuD 4.2.1.33, 4.2.1.35 - E ko:K01704 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
DBDEDFDM_00608 0.0 - - - KL - - - Psort location Cytoplasmic, score 8.87
DBDEDFDM_00610 1.37e-248 - - - S ko:K07052 - ko00000 CAAX protease self-immunity
DBDEDFDM_00611 6.4e-282 pyr 1.3.98.1 - F ko:K00226 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Dihydroorotate dehydrogenase
DBDEDFDM_00612 0.0 murA 2.5.1.7 - M ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DBDEDFDM_00613 6.22e-289 - - - G - - - Transmembrane secretion effector
DBDEDFDM_00614 5.43e-166 - - - K - - - Bacterial regulatory proteins, tetR family
DBDEDFDM_00615 9.22e-183 - - - - - - - -
DBDEDFDM_00616 1.43e-95 rplK - - J ko:K02867 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
DBDEDFDM_00617 1.23e-159 rplA - - J ko:K02863 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
DBDEDFDM_00618 1.32e-224 - 5.2.1.8 - M ko:K01802 - ko00000,ko01000 FKBP-type peptidyl-prolyl cis-trans isomerase
DBDEDFDM_00619 4.19e-242 - - - - - - - -
DBDEDFDM_00620 8.35e-232 - - - - - - - -
DBDEDFDM_00621 7.23e-214 ybbN - - O ko:K05838 - ko00000,ko03110 Tetratricopeptide repeat
DBDEDFDM_00622 9.54e-153 - - - S - - - CYTH
DBDEDFDM_00625 2.41e-236 - - - K ko:K02529 - ko00000,ko03000 Bacterial regulatory proteins, lacI family
DBDEDFDM_00626 2.02e-26 - 4.2.1.68 - M ko:K18334 ko00051,ko01120,map00051,map01120 ko00000,ko00001,ko01000 carboxylic acid catabolic process
DBDEDFDM_00627 1.34e-85 - 4.2.1.68 - M ko:K18334 ko00051,ko01120,map00051,map01120 ko00000,ko00001,ko01000 Enolase C-terminal domain-like
DBDEDFDM_00628 2.18e-211 - 1.1.1.100, 1.1.1.413 - IQ ko:K00059,ko:K18333,ko:K22322 ko00051,ko00061,ko00333,ko00780,ko01040,ko01100,ko01120,ko01130,ko01212,map00051,map00061,map00333,map00780,map01040,map01100,map01120,map01130,map01212 ko00000,ko00001,ko00002,ko01000,ko01004 KR domain
DBDEDFDM_00630 0.0 gnpA 2.4.1.211 - S ko:K15533 - ko00000,ko01000 Lacto-N-biose phosphorylase C-terminal domain
DBDEDFDM_00631 2.69e-82 psp1 3.5.99.10 - J ko:K09022 - ko00000,ko01000 Endoribonuclease L-PSP
DBDEDFDM_00632 3.93e-230 - 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 Glycerophosphoryl diester phosphodiesterase family
DBDEDFDM_00633 0.0 argS 6.1.1.19 - J ko:K01887 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Arginyl-tRNA synthetase
DBDEDFDM_00634 0.0 lysA 4.1.1.20 - E ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
DBDEDFDM_00635 5.94e-107 - 2.7.1.208 - G ko:K02777,ko:K20107,ko:K20108 ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111 ko00000,ko00001,ko00002,ko01000,ko02000 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
DBDEDFDM_00636 0.0 nagE 2.7.1.193 - G ko:K02802,ko:K02803,ko:K02804 ko00520,ko02060,map00520,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 phosphotransferase system, EIIB
DBDEDFDM_00637 8.89e-305 hom 1.1.1.3, 2.7.2.4 - E ko:K00003,ko:K12524 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Homoserine dehydrogenase
DBDEDFDM_00638 5.51e-239 thrB 2.7.1.39 - E ko:K00872 ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
DBDEDFDM_00639 0.0 maf - - DF ko:K06287 - ko00000 Maf-like protein
DBDEDFDM_00640 5.49e-85 - - - - - - - -
DBDEDFDM_00641 8.09e-76 - - - - - - - -
DBDEDFDM_00642 9.19e-210 lolD - - V ko:K02003 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
DBDEDFDM_00643 0.0 - - - V - - - Efflux ABC transporter, permease protein
DBDEDFDM_00644 2.74e-214 - - - S ko:K07088 - ko00000 Transporter, auxin efflux carrier (AEC) family protein
DBDEDFDM_00645 4.04e-304 dapE 3.5.1.18 - E ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Peptidase dimerisation domain
DBDEDFDM_00646 0.0 rne 3.1.26.12 - J ko:K08300,ko:K08301 ko03018,map03018 ko00000,ko00001,ko00002,ko01000,ko03009,ko03019 Ribonuclease E/G family
DBDEDFDM_00647 1.44e-62 rplU - - J ko:K02888 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein binds to 23S rRNA in the presence of protein L20
DBDEDFDM_00648 2.12e-53 rpmA - - J ko:K02899 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal L27 protein
DBDEDFDM_00649 1.27e-273 - - - K - - - Psort location Cytoplasmic, score
DBDEDFDM_00650 0.0 obg - - S ko:K03979 - ko00000,ko01000,ko03009 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
DBDEDFDM_00651 2.13e-256 proB 2.7.2.11 - E ko:K00931 ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
DBDEDFDM_00652 2.89e-294 aspC 2.6.1.1 - E ko:K00812 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko01000,ko01007 DegT/DnrJ/EryC1/StrS aminotransferase family
DBDEDFDM_00654 2.02e-43 secE - - U ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
DBDEDFDM_00655 2.6e-163 nusG - - K ko:K02601 - ko00000,ko03009,ko03021 Participates in transcription elongation, termination and antitermination
DBDEDFDM_00656 1.27e-221 plsC2 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Phosphate acyltransferases
DBDEDFDM_00657 1.38e-227 gpsA 1.1.1.94 - I ko:K00057 ko00564,ko01110,map00564,map01110 ko00000,ko00001,ko01000 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
DBDEDFDM_00658 5.79e-278 ddl 6.3.2.4 - F ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Belongs to the D-alanine--D-alanine ligase family
DBDEDFDM_00659 1.73e-253 glpQ 3.1.4.46 - C ko:K01126 ko00564,map00564 ko00000,ko00001,ko01000 Glycerophosphoryl diester phosphodiesterase family
DBDEDFDM_00660 6.07e-29 - - - L - - - Transposase, Mutator family
DBDEDFDM_00661 3.18e-106 - - - - - - - -
DBDEDFDM_00662 6.4e-123 - - - L - - - Restriction endonuclease NotI
DBDEDFDM_00664 4.99e-61 - - - - - - - -
DBDEDFDM_00665 7.13e-56 - - - O - - - Glutaredoxin
DBDEDFDM_00666 5.09e-200 - - - S ko:K07058 - ko00000 Virulence factor BrkB
DBDEDFDM_00667 3.38e-128 bcp 1.11.1.15 - O ko:K03564 - ko00000,ko01000 Redoxin
DBDEDFDM_00668 3.79e-52 urtE - - E ko:K11963 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC transporter
DBDEDFDM_00669 5.48e-150 upp 2.4.2.9 - F ko:K00761 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
DBDEDFDM_00670 2.21e-109 rlmH 2.1.1.177 - J ko:K00783 - ko00000,ko01000,ko03009 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
DBDEDFDM_00671 0.0 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
DBDEDFDM_00672 4.31e-166 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
DBDEDFDM_00673 7.06e-132 - - - K - - - Transcriptional regulator C-terminal region
DBDEDFDM_00674 0.0 aroP - - E ko:K03293,ko:K11732 - ko00000,ko02000 aromatic amino acid transport protein AroP K03293
DBDEDFDM_00675 0.0 lacZ 3.2.1.23 - G ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
DBDEDFDM_00676 4.01e-235 - - - S - - - Protein of unknown function (DUF559)
DBDEDFDM_00677 5.06e-260 ilvC 1.1.1.86 - H ko:K00053 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
DBDEDFDM_00678 6.15e-261 ilvC 1.1.1.86 - H ko:K00053 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
DBDEDFDM_00679 0.0 - - - EGP - - - Sugar (and other) transporter
DBDEDFDM_00680 0.0 scrT - - G - - - Transporter major facilitator family protein
DBDEDFDM_00681 1.05e-97 gtfA 2.4.1.7 GH13 G ko:K00690 ko00500,map00500 ko00000,ko00001,ko01000 Domain of unknown function (DUF1964)
DBDEDFDM_00682 7.7e-254 - - - K ko:K03484 - ko00000,ko03000 helix_turn _helix lactose operon repressor
DBDEDFDM_00683 3.1e-80 crcB - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DBDEDFDM_00684 5.91e-209 crcB - - U ko:K06199 - ko00000,ko02000 Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DBDEDFDM_00685 1.94e-316 purA 6.3.4.4 - F ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
DBDEDFDM_00686 2.17e-253 fbaA 4.1.2.13 - G ko:K01624 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Fructose-bisphosphate aldolase class-II
DBDEDFDM_00687 0.0 - 3.2.1.8, 3.5.1.104 - G ko:K01181,ko:K22278 - ko00000,ko01000 Polysaccharide deacetylase
DBDEDFDM_00688 1.17e-73 - - - K - - - Cro/C1-type HTH DNA-binding domain
DBDEDFDM_00690 7.82e-65 - - - E - - - IrrE N-terminal-like domain
DBDEDFDM_00691 1.96e-83 - - - - - - - -
DBDEDFDM_00692 4.37e-80 - - - - - - - -
DBDEDFDM_00694 1.36e-94 - - - S - - - Domain of unknown function (DUF4417)
DBDEDFDM_00695 4.3e-56 - - - S - - - Bacterial mobilisation protein (MobC)
DBDEDFDM_00696 0.0 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
DBDEDFDM_00698 1.08e-219 htpX - - O ko:K03799 - ko00000,ko00002,ko01000,ko01002 Belongs to the peptidase M48B family
DBDEDFDM_00699 0.0 fprA 1.18.1.2, 1.19.1.1 - C ko:K00528 - ko00000,ko01000 Pyridine nucleotide-disulphide oxidoreductase
DBDEDFDM_00700 0.0 - 3.6.3.4, 3.6.3.54 - P ko:K01533,ko:K17686 ko01524,ko04016,map01524,map04016 ko00000,ko00001,ko01000 E1-E2 ATPase
DBDEDFDM_00701 7.51e-253 degP - - O ko:K08372 ko02020,map02020 ko00000,ko00001,ko01000,ko01002 Domain present in PSD-95, Dlg, and ZO-1/2.
DBDEDFDM_00702 0.0 tgt 2.4.2.29 - F ko:K00773 - ko00000,ko01000,ko03016 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
DBDEDFDM_00704 1.84e-109 - - - Q - - - Acetyltransferase (GNAT) domain
DBDEDFDM_00705 1.58e-199 - - - I - - - Serine aminopeptidase, S33
DBDEDFDM_00706 1.75e-69 - - - S - - - Putative heavy-metal-binding
DBDEDFDM_00707 1.71e-58 - - - D - - - DivIVA domain protein
DBDEDFDM_00708 5.29e-116 mutT 3.6.1.55 - L ko:K03574 - ko00000,ko01000,ko03400 NUDIX domain
DBDEDFDM_00709 1.81e-241 - - - KL - - - Domain of unknown function (DUF3427)
DBDEDFDM_00710 0.0 - - - KL - - - Domain of unknown function (DUF3427)
DBDEDFDM_00712 1.17e-250 msrA 1.8.4.11, 1.8.4.12 - O ko:K07304,ko:K12267 - ko00000,ko01000 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DBDEDFDM_00714 3.87e-146 - - - - - - - -
DBDEDFDM_00715 5.37e-215 - - - EG - - - EamA-like transporter family
DBDEDFDM_00716 2.14e-261 pldB 3.1.1.5 - I ko:K01048 ko00564,map00564 ko00000,ko00001,ko01000 Serine aminopeptidase, S33
DBDEDFDM_00717 0.0 - - - S ko:K01421 - ko00000 YhgE Pip domain protein
DBDEDFDM_00718 0.0 - - - S ko:K01421 - ko00000 YhgE Pip domain protein
DBDEDFDM_00719 0.0 pepX 3.4.14.5 - E ko:K01278 ko04974,map04974 ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 Dipeptidyl peptidase IV (DPP IV) N-terminal region
DBDEDFDM_00720 1.5e-166 fhaA - - T - - - Protein of unknown function (DUF2662)
DBDEDFDM_00721 1.44e-122 fhaB - - T - - - Inner membrane component of T3SS, cytoplasmic domain
DBDEDFDM_00722 0.0 pstP 3.1.3.16 - T ko:K20074 - ko00000,ko01000,ko01009 Sigma factor PP2C-like phosphatases
DBDEDFDM_00723 0.0 rodA - - D ko:K03588 ko04112,map04112 ko00000,ko00001,ko02000,ko03036 Belongs to the SEDS family
DBDEDFDM_00724 0.0 pbpA - - M ko:K05364 ko00550,map00550 ko00000,ko00001,ko01011 penicillin-binding protein
DBDEDFDM_00725 5.69e-234 pknA 2.7.11.1 - T ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 Protein tyrosine kinase
DBDEDFDM_00726 0.0 pknB 2.7.11.1 - KLT ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 Protein tyrosine kinase
DBDEDFDM_00727 9.5e-156 trpG 2.6.1.85, 4.1.3.27 - EH ko:K01658,ko:K01664 ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 para-aminobenzoate synthase glutamine amidotransferase component II
DBDEDFDM_00728 1.14e-295 srtB 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
DBDEDFDM_00729 2.05e-183 - - - S - - - Bacterial protein of unknown function (DUF881)
DBDEDFDM_00730 1.77e-93 crgA - - D - - - Involved in cell division
DBDEDFDM_00731 0.0 - - - L - - - ribosomal rna small subunit methyltransferase
DBDEDFDM_00732 4.48e-151 - - - L - - - HTH-like domain
DBDEDFDM_00733 1.19e-186 gluP 3.4.21.105 - S ko:K19225 - ko00000,ko01000,ko01002 Rhomboid family
DBDEDFDM_00734 7.68e-47 - - - - - - - -
DBDEDFDM_00736 0.0 glgP 2.4.1.1 GT35 G ko:K00688 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 ko00000,ko00001,ko01000 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
DBDEDFDM_00737 5.53e-96 - - - I - - - Sterol carrier protein
DBDEDFDM_00738 2.75e-101 - - - V ko:K06147 - ko00000,ko02000 ATPases associated with a variety of cellular activities
DBDEDFDM_00739 2.27e-85 istB - - L - - - IstB-like ATP binding protein
DBDEDFDM_00740 1.21e-57 - - - L - - - Integrase core domain
DBDEDFDM_00741 0.0 - - - U - - - Drug resistance MFS transporter, drug H antiporter-2 family
DBDEDFDM_00742 1.9e-17 - - - - - - - -
DBDEDFDM_00743 1.53e-24 yccF - - S - - - Inner membrane component domain
DBDEDFDM_00744 0.0 - - - S ko:K07133 - ko00000 Domain of unknown function (DUF4143)
DBDEDFDM_00745 7.83e-50 - - - L - - - Transposase and inactivated derivatives IS30 family
DBDEDFDM_00747 9.29e-79 - - - V ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
DBDEDFDM_00748 4.78e-119 - - - - - - - -
DBDEDFDM_00749 0.0 uvrA - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
DBDEDFDM_00750 0.0 uvrC - - L ko:K03703 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
DBDEDFDM_00751 1.23e-229 aroE 1.1.1.25 - E ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Shikimate dehydrogenase substrate binding domain
DBDEDFDM_00752 7.42e-228 yvcJ - - S ko:K06958 - ko00000,ko03019 Displays ATPase and GTPase activities
DBDEDFDM_00753 3.23e-222 whiA - - K ko:K09762 - ko00000 May be required for sporulation
DBDEDFDM_00754 6.71e-284 pgk 2.7.2.3, 5.3.1.1 - F ko:K00927,ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Phosphoglycerate kinase
DBDEDFDM_00755 3.84e-189 tpiA 5.3.1.1 - G ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
DBDEDFDM_00756 1.2e-45 secG - - U ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase SecG subunit
DBDEDFDM_00757 3.02e-228 ldh 1.1.1.27 - C ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 ko00000,ko00001,ko01000,ko04147 Belongs to the LDH MDH superfamily
DBDEDFDM_00758 3.47e-208 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
DBDEDFDM_00759 6.31e-17 - - - V - - - MatE
DBDEDFDM_00760 3.23e-271 - - - V - - - MatE
DBDEDFDM_00762 0.0 brnQ - - U ko:K03311 - ko00000 Component of the transport system for branched-chain amino acids
DBDEDFDM_00763 1.88e-183 - - - S - - - Protein of unknown function (DUF1275)
DBDEDFDM_00764 9.13e-108 tal 2.2.1.2 - H ko:K00616 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
DBDEDFDM_00765 1.25e-111 tal 2.2.1.2 - H ko:K00616 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
DBDEDFDM_00766 0.0 tkt 2.2.1.1 - H ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the transketolase family
DBDEDFDM_00767 1.07e-284 hrcA - - K ko:K03705 - ko00000,ko03000 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
DBDEDFDM_00768 1.04e-255 dnaJ - - O ko:K03686 - ko00000,ko03029,ko03110 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
DBDEDFDM_00769 1.36e-202 - - - G - - - Fructosamine kinase
DBDEDFDM_00770 8.18e-216 uppP 3.6.1.27 - V ko:K06153 ko00550,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
DBDEDFDM_00771 2.89e-199 - - - S - - - PAC2 family
DBDEDFDM_00775 1.33e-273 - - - - - - - -
DBDEDFDM_00779 0.0 - - - U ko:K06956 - ko00000 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
DBDEDFDM_00780 0.0 thrS 6.1.1.3 - J ko:K01868 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DBDEDFDM_00781 0.0 - 3.2.1.52 GH20 M ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 ko00000,ko00001,ko00002,ko01000,ko03110 Glycosyl hydrolase family 20, catalytic domain
DBDEDFDM_00782 2.79e-176 yebC - - K - - - transcriptional regulatory protein
DBDEDFDM_00783 2.64e-129 ruvC 3.1.22.4 - L ko:K01159 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
DBDEDFDM_00785 2.6e-135 ruvA 3.6.4.12 - L ko:K03550 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
DBDEDFDM_00786 4e-258 ruvB 3.6.4.12 - L ko:K03551 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
DBDEDFDM_00787 3.73e-72 yajC - - U ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Preprotein translocase subunit
DBDEDFDM_00788 3.9e-131 apt 2.4.2.7 - F ko:K00759 ko00230,ko01100,map00230,map01100 ko00000,ko00001,ko01000,ko04147 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DBDEDFDM_00789 2.85e-285 sucC 6.2.1.5 - F ko:K01903 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
DBDEDFDM_00790 9.52e-212 sucD 6.2.1.5 - C ko:K01902 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
DBDEDFDM_00791 1.1e-313 - - - - - - - -
DBDEDFDM_00792 0.0 purH 2.1.2.3, 3.5.4.10 - F ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 ko00000,ko00001,ko00002,ko01000,ko04147 Bifunctional purine biosynthesis protein PurH
DBDEDFDM_00793 5.17e-56 - - - - - - - -
DBDEDFDM_00794 9.88e-167 - - - U ko:K06188 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
DBDEDFDM_00795 1.9e-186 rluB 5.4.99.19, 5.4.99.22 - J ko:K06178,ko:K06183 - ko00000,ko01000,ko03009 Belongs to the pseudouridine synthase RsuA family
DBDEDFDM_00796 0.0 der - - F ko:K03977 - ko00000,ko03009 GTPase that plays an essential role in the late steps of ribosome biogenesis
DBDEDFDM_00797 0.0 trpB 4.2.1.20 - E ko:K01696 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
DBDEDFDM_00798 4.37e-208 trpA 4.2.1.20 - E ko:K01695 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
DBDEDFDM_00799 1.47e-242 lgt - - M - - - Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
DBDEDFDM_00800 1.27e-143 rpe 5.1.3.1 - G ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Ribulose-phosphate 3-epimerase
DBDEDFDM_00801 1.2e-54 hisE 3.6.1.31 - E ko:K01523 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Phosphoribosyl-ATP pyrophosphohydrolase
DBDEDFDM_00802 1.07e-200 hisG 2.4.2.17 - F ko:K00765,ko:K02502 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 ATP phosphoribosyltransferase
DBDEDFDM_00803 1.57e-151 pgsA2 2.7.8.41, 2.7.8.5 - I ko:K00995,ko:K08744 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DBDEDFDM_00804 1.13e-222 - - - S - - - Bacterial protein of unknown function (DUF881)
DBDEDFDM_00805 2.78e-57 sbp - - S - - - Protein of unknown function (DUF1290)
DBDEDFDM_00806 7.92e-182 - - - S - - - Bacterial protein of unknown function (DUF881)
DBDEDFDM_00807 2.88e-96 garA - - T - - - Inner membrane component of T3SS, cytoplasmic domain
DBDEDFDM_00808 1.14e-152 merR2 - - K - - - helix_turn_helix, mercury resistance
DBDEDFDM_00809 2.84e-82 - - - - - - - -
DBDEDFDM_00811 7.66e-32 - - - L - - - DNA integration
DBDEDFDM_00812 4.36e-162 - - - S - - - GyrI-like small molecule binding domain
DBDEDFDM_00813 1.23e-116 - - - K - - - Putative zinc ribbon domain
DBDEDFDM_00816 5.93e-183 nt5e 3.1.3.18 - S ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 ko00000,ko00001,ko01000 HAD-hyrolase-like
DBDEDFDM_00817 1.11e-81 rbpA - - K - - - Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
DBDEDFDM_00818 0.0 helY - - L ko:K03727 - ko00000,ko01000 DEAD DEAH box helicase
DBDEDFDM_00819 2.14e-69 - - - - - - - -
DBDEDFDM_00820 0.0 - - - K - - - WYL domain
DBDEDFDM_00821 0.0 ugp 2.7.7.9 - G ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 UTP-glucose-1-phosphate uridylyltransferase
DBDEDFDM_00823 3.58e-115 dkg - - S - - - Oxidoreductase, aldo keto reductase family protein
DBDEDFDM_00824 7.48e-186 - 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Carboxymuconolactone decarboxylase family
DBDEDFDM_00825 6.72e-303 nnrD 4.2.1.136, 5.1.99.6 - H ko:K17758,ko:K17759 - ko00000,ko01000 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
DBDEDFDM_00826 1.51e-99 nnrD 4.2.1.136, 5.1.99.6 - H ko:K17758,ko:K17759 - ko00000,ko01000 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
DBDEDFDM_00827 6.72e-158 - 3.8.1.2 - S ko:K01560 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
DBDEDFDM_00828 1.23e-221 - - - K - - - Bacterial regulatory helix-turn-helix protein, lysR family
DBDEDFDM_00829 3.77e-118 - - - T - - - Domain of unknown function (DUF4234)
DBDEDFDM_00830 3.35e-131 - - - K - - - Bacterial regulatory proteins, tetR family
DBDEDFDM_00831 1.95e-23 - - - - - - - -
DBDEDFDM_00832 6.95e-63 tam 2.1.1.144, 2.1.1.197 - FG ko:K00598,ko:K02169 ko00780,ko01100,map00780,map01100 ko00000,ko00001,ko00002,ko01000 trans-aconitate 2-methyltransferase activity
DBDEDFDM_00833 1.17e-54 - - - K - - - Helix-turn-helix
DBDEDFDM_00834 1.2e-285 - 2.7.11.1 - S ko:K07154 - ko00000,ko01000,ko01001,ko02048 HipA N-terminal domain
DBDEDFDM_00835 1.01e-86 - 4.1.1.44 - S ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 ko00000,ko00001,ko01000 Cupin domain
DBDEDFDM_00836 7.64e-225 - - - S ko:K07088 - ko00000 Membrane transport protein
DBDEDFDM_00837 6.21e-69 - - - K - - - Transcriptional regulator PadR-like family
DBDEDFDM_00838 7.99e-25 - - - K - - - Transcriptional regulator PadR-like family
DBDEDFDM_00839 3.14e-171 - - - L ko:K07457 - ko00000 endonuclease III
DBDEDFDM_00840 6.88e-169 - - - S - - - Enoyl-(Acyl carrier protein) reductase
DBDEDFDM_00841 3.98e-311 - - - V - - - MatE
DBDEDFDM_00842 0.0 uvrA3 - - L ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DBDEDFDM_00843 1.76e-19 - - - KLT - - - Protein tyrosine kinase
DBDEDFDM_00844 8.59e-24 - - - K - - - Psort location Cytoplasmic, score
DBDEDFDM_00845 8.06e-21 - - - - - - - -
DBDEDFDM_00846 7.26e-182 - - - - - - - -
DBDEDFDM_00847 2.48e-115 adh 1.1.1.1 - C ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 ko00000,ko00001,ko01000 Zinc-binding dehydrogenase
DBDEDFDM_00848 0.0 pheT 6.1.1.20 - J ko:K01890 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Phenylalanyl-tRNA synthetase beta
DBDEDFDM_00849 5.01e-133 - - - - - - - -
DBDEDFDM_00850 1.84e-260 argC 1.2.1.38 - E ko:K00145 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
DBDEDFDM_00851 1.49e-274 argJ 2.3.1.1, 2.3.1.35 - E ko:K00620 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
DBDEDFDM_00852 4.12e-227 argB 2.7.2.8 - E ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the acetylglutamate kinase family. ArgB subfamily
DBDEDFDM_00853 4.83e-314 argD 2.6.1.11, 2.6.1.17 - E ko:K00821 ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase class-III
DBDEDFDM_00854 1.69e-232 argF 2.1.3.3 - E ko:K00611 ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DBDEDFDM_00855 1.29e-112 argR - - K ko:K03402 - ko00000,ko03000 Regulates arginine biosynthesis genes
DBDEDFDM_00856 5.96e-304 argG 6.3.4.5 - E ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the argininosuccinate synthase family. Type 1 subfamily
DBDEDFDM_00857 3.95e-114 - 3.1.21.3 - V ko:K01154 - ko00000,ko01000,ko02048 type I restriction modification DNA specificity domain
DBDEDFDM_00858 1.23e-228 - - - L - - - Phage integrase family
DBDEDFDM_00859 2e-41 - - - - - - - -
DBDEDFDM_00860 1.5e-197 - - - S - - - Domain of unknown function (DUF4357)
DBDEDFDM_00861 0.0 hsdM 2.1.1.72 - V ko:K03427 - ko00000,ko01000,ko02048 modification (methylase) protein of type I restriction-modification system K03427
DBDEDFDM_00862 2.3e-154 - 3.1.21.3 - V ko:K01154 - ko00000,ko01000,ko02048 type I restriction modification DNA specificity domain
DBDEDFDM_00863 0.0 - - - K - - - Putative DNA-binding domain
DBDEDFDM_00864 0.0 hsdR 3.1.21.3 - V ko:K01153 - ko00000,ko01000,ko02048 Subunit R is required for both nuclease and ATPase activities, but not for modification
DBDEDFDM_00865 1.85e-62 argH 4.3.2.1 - E ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 argininosuccinate lyase
DBDEDFDM_00866 4.01e-276 argH 4.3.2.1 - E ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 argininosuccinate lyase
DBDEDFDM_00867 2.65e-139 - - - S ko:K06950 - ko00000 Metal dependent phosphohydrolases with conserved 'HD' motif.
DBDEDFDM_00868 3.54e-185 - - - S - - - Putative ABC-transporter type IV
DBDEDFDM_00869 0.0 tyrS 6.1.1.1 - J ko:K01866 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
DBDEDFDM_00870 3.05e-276 - - - L - - - Tetratricopeptide repeat
DBDEDFDM_00871 1.53e-242 - - - G - - - Haloacid dehalogenase-like hydrolase
DBDEDFDM_00873 5.05e-175 tlyA 2.1.1.226, 2.1.1.227 - J ko:K06442 - ko00000,ko01000,ko03009 Ribosomal RNA large subunit methyltransferase J
DBDEDFDM_00874 4.57e-143 - - - - - - - -
DBDEDFDM_00875 5.24e-150 trkA - - P ko:K03499 - ko00000,ko02000 TrkA-N domain
DBDEDFDM_00876 0.0 trkH - - P ko:K03498 - ko00000,ko02000 Cation transport protein
DBDEDFDM_00877 3.15e-235 nadK 2.7.1.23 - H ko:K00858 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DBDEDFDM_00878 0.0 recN - - L ko:K03631 - ko00000,ko03400 May be involved in recombinational repair of damaged DNA
DBDEDFDM_00879 9.82e-156 - - - S - - - Haloacid dehalogenase-like hydrolase
DBDEDFDM_00880 6.98e-78 - - - K ko:K07979 - ko00000,ko03000 helix_turn_helix gluconate operon transcriptional repressor
DBDEDFDM_00881 1.56e-227 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
DBDEDFDM_00882 1.77e-162 - - - S - - - ABC-2 family transporter protein
DBDEDFDM_00883 2.66e-157 - - - S - - - ABC-2 family transporter protein
DBDEDFDM_00884 0.0 thrC 4.2.3.1 - E ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 ko00000,ko00001,ko00002,ko01000 Threonine synthase N terminus
DBDEDFDM_00885 2.06e-299 proA 1.2.1.41 - E ko:K00147 ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
DBDEDFDM_00886 4.24e-119 - - - - - - - -
DBDEDFDM_00887 5.93e-187 nadD 2.7.7.18 - H ko:K00969 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
DBDEDFDM_00888 6.24e-244 prs 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DBDEDFDM_00890 0.0 glmU 2.3.1.157, 2.7.7.23 - M ko:K04042 ko00520,ko01100,ko01130,map00520,map01100,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
DBDEDFDM_00891 6.1e-89 rsfS - - J ko:K09710 - ko00000,ko03009 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
DBDEDFDM_00892 1.65e-177 gpmB 3.1.3.85, 5.4.2.11 - G ko:K01834,ko:K22306 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Phosphoglycerate mutase family
DBDEDFDM_00893 1.08e-101 - - - S - - - Bacterial PH domain
DBDEDFDM_00894 0.0 treS_1 - - G - - - Alpha amylase, catalytic domain
DBDEDFDM_00896 5.43e-164 - - - - - - - -
DBDEDFDM_00897 2.82e-170 - - - C - - - Putative TM nitroreductase
DBDEDFDM_00898 3.18e-188 - - - S ko:K09974 - ko00000 Domain of unknown function (DUF1287)
DBDEDFDM_00899 7.89e-91 pdxH - - S ko:K07006 - ko00000 Pfam:Pyridox_oxidase
DBDEDFDM_00900 9.38e-190 - - - KT - - - RESPONSE REGULATOR receiver
DBDEDFDM_00901 6.5e-246 - - - V - - - VanZ like family
DBDEDFDM_00902 5.99e-143 - 1.6.5.2 - S ko:K00355 ko00130,ko01110,ko05200,ko05225,ko05418,map00130,map01110,map05200,map05225,map05418 ko00000,ko00001,ko01000 NADPH-dependent FMN reductase
DBDEDFDM_00903 5.72e-144 - - - S - - - Putative ABC-transporter type IV
DBDEDFDM_00904 4.28e-198 - - - - - - - -
DBDEDFDM_00906 2.05e-150 - - - EGP ko:K08217 - br01600,ko00000,ko01504,ko02000 Transmembrane secretion effector
DBDEDFDM_00907 5.62e-226 - - - M - - - heme binding
DBDEDFDM_00908 1.31e-103 gloA - - E - - - Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
DBDEDFDM_00909 5.34e-149 - - - - - - - -
DBDEDFDM_00910 5.69e-170 - - - S - - - SOS response associated peptidase (SRAP)
DBDEDFDM_00911 7.1e-102 qseC 2.7.13.3 - T ko:K02484,ko:K07637,ko:K07643,ko:K07645,ko:K07649,ko:K07653,ko:K18351 ko01502,ko01503,ko02020,ko02024,map01502,map01503,map02020,map02024 ko00000,ko00001,ko00002,ko01000,ko01001,ko01504,ko02022 Histidine kinase
DBDEDFDM_00912 5.7e-235 - - - S - - - Acetyltransferase (GNAT) domain
DBDEDFDM_00913 2.9e-48 - - - J - - - Aminoacyl-tRNA editing domain
DBDEDFDM_00914 1.32e-47 - - - F - - - Hydrolase of X-linked nucleoside diphosphate N terminal
DBDEDFDM_00915 1.9e-74 - - - K - - - Transcriptional regulator
DBDEDFDM_00916 1.12e-126 - - - K - - - FR47-like protein
DBDEDFDM_00917 1.81e-155 - - - J - - - Acetyltransferase (GNAT) domain
DBDEDFDM_00918 8.22e-85 - - - K - - - Protein of unknown function, DUF488
DBDEDFDM_00919 8.85e-209 nfo 3.1.21.2 - L ko:K01151 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
DBDEDFDM_00920 0.0 - - - S - - - Psort location Cytoplasmic, score 8.87
DBDEDFDM_00921 8.21e-176 - - - S - - - Domain of unknown function (DUF4194)
DBDEDFDM_00924 1.22e-15 - - - S - - - Psort location Cytoplasmic, score 8.87
DBDEDFDM_00925 0.0 - - - E - - - Serine carboxypeptidase
DBDEDFDM_00926 7e-208 gpmB 3.1.3.85, 5.4.2.11 - G ko:K01834,ko:K22306 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Phosphoglycerate mutase family
DBDEDFDM_00927 1.72e-218 corA - - P ko:K03284 - ko00000,ko02000 CorA-like Mg2+ transporter protein
DBDEDFDM_00928 1.31e-214 - - - ET ko:K10005 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Bacterial periplasmic substrate-binding proteins
DBDEDFDM_00929 0.0 leuS 6.1.1.4 - J ko:K01869 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Belongs to the class-I aminoacyl-tRNA synthetase family
DBDEDFDM_00930 3.78e-156 rsmD 2.1.1.171 - L ko:K08316 - ko00000,ko01000,ko03009 Conserved hypothetical protein 95
DBDEDFDM_00931 7.85e-139 - - - S ko:K07078 - ko00000 Nitroreductase family
DBDEDFDM_00932 1.32e-107 - - - O - - - Hsp20/alpha crystallin family
DBDEDFDM_00933 4.65e-231 trmD 2.1.1.228 - J ko:K00554 - ko00000,ko01000,ko03016 Belongs to the RNA methyltransferase TrmD family
DBDEDFDM_00934 2.27e-139 rimM - - J ko:K02860 - ko00000,ko03009 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
DBDEDFDM_00935 3.56e-47 - - - S ko:K06960 - ko00000 Belongs to the UPF0109 family
DBDEDFDM_00936 2.4e-80 rpsP - - J ko:K02959 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bS16 family
DBDEDFDM_00937 0.0 - - - EK ko:K05825,ko:K18907 ko00300,ko01100,ko01130,ko01210,map00300,map01100,map01130,map01210 ko00000,ko00001,ko00002,ko01000,ko01504,ko03000 Alanine-glyoxylate amino-transferase
DBDEDFDM_00938 1.36e-131 - - - S ko:K06895 - ko00000,ko02000 LysE type translocator
DBDEDFDM_00939 2.23e-281 - - - S - - - Endonuclease/Exonuclease/phosphatase family
DBDEDFDM_00940 0.0 ffh 3.6.5.4 - U ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko01000,ko02044 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DBDEDFDM_00941 8.35e-212 - - - P - - - Cation efflux family
DBDEDFDM_00942 0.0 cysS 6.1.1.16 - J ko:K01883 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
DBDEDFDM_00943 8.06e-175 - 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Peptidase C26
DBDEDFDM_00944 0.0 yjjK - - S ko:K15738 - ko00000,ko02000 ABC transporter
DBDEDFDM_00945 1.04e-76 - - - S - - - Protein of unknown function (DUF3039)
DBDEDFDM_00946 3.67e-105 coaD 2.7.7.3 - H ko:K00954 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
DBDEDFDM_00947 3.01e-184 - - - - - - - -
DBDEDFDM_00948 5.97e-145 - - - S ko:K07040 - ko00000 Uncharacterized ACR, COG1399
DBDEDFDM_00949 2.72e-34 rpmF - - J ko:K02911 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Belongs to the bacterial ribosomal protein bL32 family
DBDEDFDM_00950 1.28e-178 rnc 3.1.26.3 - J ko:K03685 ko03008,ko05205,map03008,map05205 ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
DBDEDFDM_00951 0.0 ilvB 2.2.1.6 - H ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Thiamine pyrophosphate enzyme, central domain
DBDEDFDM_00952 1.26e-118 ilvN 2.2.1.6 - E ko:K01653 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 ACT domain
DBDEDFDM_00954 1.65e-314 pncB 6.3.4.21 - F ko:K00763 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
DBDEDFDM_00955 6.69e-173 rph 2.7.7.56 - J ko:K00989 - ko00000,ko01000,ko03016 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
DBDEDFDM_00956 9.76e-153 rdgB 3.6.1.66 - F ko:K02428 ko00230,map00230 ko00000,ko00001,ko01000 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
DBDEDFDM_00957 3.96e-228 - - - S ko:K07088 - ko00000 Auxin Efflux Carrier
DBDEDFDM_00960 0.0 pgi 5.3.1.9 - G ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the GPI family
DBDEDFDM_00961 8.49e-272 - - - - - - - -
DBDEDFDM_00964 6.19e-263 - - - - - - - -
DBDEDFDM_00966 4.87e-155 mgtC - - S ko:K07507 - ko00000,ko02000 MgtC family
DBDEDFDM_00967 0.0 mgtA 3.6.3.2 - P ko:K01531 - ko00000,ko01000 Cation transporting ATPase, C-terminus
DBDEDFDM_00968 1e-28 mgtA 3.6.3.2 - P ko:K01531 - ko00000,ko01000 Cation transporting ATPase, C-terminus
DBDEDFDM_00969 0.0 - - - P ko:K02049 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
DBDEDFDM_00970 0.0 - - - P ko:K02050 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
DBDEDFDM_00971 2.46e-221 - - - K - - - Putative sugar-binding domain
DBDEDFDM_00972 3.44e-282 - - - G ko:K02775 ko00052,ko01100,ko02060,map00052,map01100,map02060 ko00000,ko00001,ko00002,ko02000 PTS system sugar-specific permease component
DBDEDFDM_00973 0.0 - 2.7.1.53 - G ko:K00880 ko00040,ko00053,map00040,map00053 ko00000,ko00001,ko01000 FGGY family of carbohydrate kinases, C-terminal domain
DBDEDFDM_00974 3.12e-220 - 5.1.3.22 - G ko:K03079 ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Xylose isomerase-like TIM barrel
DBDEDFDM_00975 8.39e-167 araD 5.1.3.4 - G ko:K03077 ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120 ko00000,ko00001,ko00002,ko01000 Class II Aldolase and Adducin N-terminal domain
DBDEDFDM_00976 2.33e-81 rplS - - J ko:K02884 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
DBDEDFDM_00977 1.03e-201 lepB 3.4.21.89 - U ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Belongs to the peptidase S26 family
DBDEDFDM_00978 6.64e-170 rnhB 3.1.26.4 - L ko:K03470 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DBDEDFDM_00979 7.27e-266 - - - K - - - helix_turn _helix lactose operon repressor
DBDEDFDM_00980 1.22e-13 tnp3521a2 - - L - - - Integrase core domain
DBDEDFDM_00981 0.0 fadD 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 AMP-binding enzyme
DBDEDFDM_00982 8.26e-199 pdxS 4.3.3.6 - H ko:K06215 ko00750,map00750 ko00000,ko00001,ko01000 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
DBDEDFDM_00983 1.91e-142 pdxT 4.3.3.6 - H ko:K08681 ko00750,map00750 ko00000,ko00001,ko01000 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
DBDEDFDM_00986 6.91e-220 - - - G - - - Glycosyl hydrolases family 43
DBDEDFDM_00987 2.44e-130 - - - G - - - Glycosyl hydrolases family 43
DBDEDFDM_00988 7.96e-259 - - - K - - - helix_turn _helix lactose operon repressor
DBDEDFDM_00989 1.24e-13 chiA 3.1.6.1, 3.2.1.14, 3.2.1.17, 3.2.1.23, 3.2.1.4 AA10,CBM15,CBM73,GH18,GH5,GH9 S ko:K01130,ko:K01179,ko:K01183,ko:K01190,ko:K03933,ko:K12308,ko:K13381 ko00052,ko00140,ko00500,ko00511,ko00520,ko00600,ko01100,map00052,map00140,map00500,map00511,map00520,map00600,map01100 ko00000,ko00001,ko01000 dextransucrase activity
DBDEDFDM_00990 5.17e-218 - - - S - - - Oxidoreductase, aldo keto reductase family protein
DBDEDFDM_00991 3.01e-172 - - - L - - - Protein of unknown function (DUF1524)
DBDEDFDM_00992 5.91e-297 mntH - - P ko:K03322 - ko00000,ko02000 H( )-stimulated, divalent metal cation uptake system
DBDEDFDM_00993 0.0 - - - U - - - Drug resistance MFS transporter, drug H antiporter-2 family
DBDEDFDM_00994 2.78e-177 rfbP - - M - - - Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
DBDEDFDM_00995 2.14e-119 - - - G ko:K02026 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
DBDEDFDM_00996 2.6e-130 - - - S - - - Protein of unknown function (DUF4127)
DBDEDFDM_00997 1.65e-72 - 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
DBDEDFDM_00998 3.23e-108 nanE 5.1.3.9 - G ko:K01788 ko00520,map00520 ko00000,ko00001,ko01000 Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
DBDEDFDM_01001 1.29e-108 - 5.99.1.2 - L ko:K03169 - ko00000,ko01000,ko03032 DNA topoisomerase
DBDEDFDM_01002 1.71e-116 - 5.99.1.2 - L ko:K03169 - ko00000,ko01000,ko03032 DNA topoisomerase
DBDEDFDM_01005 6.03e-86 - - - - - - - -
DBDEDFDM_01006 1.74e-75 - - - S - - - pathogenesis
DBDEDFDM_01007 4.75e-47 - - - L ko:K07483 - ko00000 Psort location Cytoplasmic, score 8.87
DBDEDFDM_01008 5.6e-205 - - - L ko:K07493 - ko00000 PFAM Transposase, Mutator family
DBDEDFDM_01009 5.89e-312 - - - U ko:K06956 - ko00000 Sodium:dicarboxylate symporter family
DBDEDFDM_01010 0.0 - - - - - - - -
DBDEDFDM_01013 1.43e-277 steT - - E ko:K03294 - ko00000 amino acid
DBDEDFDM_01014 0.0 recG 3.6.4.12 - L ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 helicase superfamily c-terminal domain
DBDEDFDM_01015 7.42e-41 rpmB - - J ko:K02902 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal L28 family
DBDEDFDM_01016 2.69e-256 - - - G - - - pfkB family carbohydrate kinase
DBDEDFDM_01018 4.27e-309 - - - S ko:K06902 ko04138,map04138 ko00000,ko00001,ko02000,ko04131 Vacuole effluxer Atg22 like
DBDEDFDM_01019 3.38e-170 - - - K - - - helix_turn_helix, mercury resistance
DBDEDFDM_01021 1.77e-72 - - - L - - - RelB antitoxin
DBDEDFDM_01022 2.16e-271 - - - K - - - Helix-turn-helix XRE-family like proteins
DBDEDFDM_01023 2.31e-160 tam 2.1.1.144 - S ko:K00598 - ko00000,ko01000 Methyltransferase domain
DBDEDFDM_01024 0.0 - - - L - - - Recombinase
DBDEDFDM_01025 1.57e-129 - 3.1.21.3 - L ko:K01154 - ko00000,ko01000,ko02048 Type I restriction modification DNA specificity domain
DBDEDFDM_01026 5.46e-179 - - - - - - - -
DBDEDFDM_01027 0.0 - 2.1.1.72 - V ko:K03427 - ko00000,ko01000,ko02048 modification (methylase) protein of type I restriction-modification system K03427
DBDEDFDM_01028 0.0 hsdR 3.1.21.3 - V ko:K01153 - ko00000,ko01000,ko02048 Subunit R is required for both nuclease and ATPase activities, but not for modification
DBDEDFDM_01029 2.86e-39 - - - - - - - -
DBDEDFDM_01030 1.35e-76 - - - D ko:K03496 - ko00000,ko03036,ko04812 Involved in chromosome partitioning
DBDEDFDM_01031 6.97e-37 - - - D ko:K03496 - ko00000,ko03036,ko04812 Involved in chromosome partitioning
DBDEDFDM_01032 1.37e-303 - - - S - - - Relaxase/Mobilisation nuclease domain
DBDEDFDM_01033 2.57e-122 - - - S - - - Bacterial mobilisation protein (MobC)
DBDEDFDM_01038 5.68e-260 - - - S ko:K06919 - ko00000 Poxvirus D5 protein-like
DBDEDFDM_01039 1.02e-42 - - - K - - - Helix-turn-helix domain
DBDEDFDM_01044 0.00013 - - - TV ko:K05792 - ko00000 HNH endonuclease
DBDEDFDM_01045 0.0 - 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 AMP-binding enzyme
DBDEDFDM_01046 4.07e-57 - - - K - - - Transcriptional regulator
DBDEDFDM_01049 2.41e-108 - - - - - - - -
DBDEDFDM_01050 1.67e-295 - 2.6.1.1 - E ko:K11358 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko01000,ko01007 Psort location Cytoplasmic, score 8.87
DBDEDFDM_01051 5.96e-178 - - - S - - - Psort location Cytoplasmic, score 8.87
DBDEDFDM_01052 3.05e-153 - - - K - - - Bacterial regulatory proteins, tetR family
DBDEDFDM_01053 1.04e-169 - - - M - - - Mechanosensitive ion channel
DBDEDFDM_01054 0.0 clpB - - O ko:K03695,ko:K03696 ko01100,ko04213,map01100,map04213 ko00000,ko00001,ko03110 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
DBDEDFDM_01056 2.84e-199 - - - Q - - - Fumarylacetoacetate (FAA) hydrolase family
DBDEDFDM_01057 2.76e-177 - - - S - - - Domain of unknown function (DUF4854)
DBDEDFDM_01058 6.52e-271 - 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
DBDEDFDM_01059 0.0 - - - M - - - LPXTG cell wall anchor motif
DBDEDFDM_01060 0.0 - - - M - - - domain protein
DBDEDFDM_01061 2.45e-70 acyP 3.6.1.7 - C ko:K01512 ko00620,ko00627,ko01120,map00620,map00627,map01120 ko00000,ko00001,ko01000 Acylphosphatase
DBDEDFDM_01062 2.58e-190 - - - S ko:K06997 - ko00000 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
DBDEDFDM_01063 5.99e-237 gluQ 6.1.1.17 - J ko:K01885 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
DBDEDFDM_01064 7.85e-177 - - - M - - - Protein of unknown function (DUF3152)
DBDEDFDM_01065 8.06e-176 glpF - - U ko:K02440 - ko00000,ko02000 Belongs to the MIP aquaporin (TC 1.A.8) family
DBDEDFDM_01067 1.97e-47 - - - E - - - Domain of unknown function (DUF5011)
DBDEDFDM_01068 2.59e-41 - - - S - - - Parallel beta-helix repeats
DBDEDFDM_01069 2.34e-92 rplI - - J ko:K02939 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds to the 23S rRNA
DBDEDFDM_01070 1.51e-48 rpsR - - J ko:K02963 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
DBDEDFDM_01071 3.92e-111 ssb - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Single-stranded DNA-binding protein
DBDEDFDM_01072 6.47e-64 rpsF - - J ko:K02990 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Binds together with S18 to 16S ribosomal RNA
DBDEDFDM_01073 5.22e-246 - - - T - - - Pfam Adenylate and Guanylate cyclase catalytic domain
DBDEDFDM_01075 4.07e-167 - - - - - - - -
DBDEDFDM_01076 0.0 - - - D - - - Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
DBDEDFDM_01077 5.34e-244 prs 2.7.6.1 - F ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DBDEDFDM_01078 2.62e-136 - - - S ko:K06999 - ko00000 Phospholipase/Carboxylesterase
DBDEDFDM_01079 0.0 nhaP - - P ko:K03316 - ko00000 Sodium/hydrogen exchanger family
DBDEDFDM_01080 6.04e-144 dcd 3.5.4.13 - F ko:K01494 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dCTP deaminase family
DBDEDFDM_01081 0.0 - 3.2.1.22 - G ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 ko00000,ko00001,ko01000 Glycosyl hydrolase family 36 N-terminal domain
DBDEDFDM_01082 0.0 pacL2 3.6.3.8 - P ko:K01537 - ko00000,ko01000 Cation transporter/ATPase, N-terminus
DBDEDFDM_01084 2.19e-223 rlmB 2.1.1.185 - J ko:K03218 - ko00000,ko01000,ko03009 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DBDEDFDM_01085 0.0 - - - KLT - - - Domain of unknown function (DUF4032)
DBDEDFDM_01086 9.07e-199 - - - - - - - -
DBDEDFDM_01087 5.5e-216 - 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase family
DBDEDFDM_01088 2.85e-308 - - - M - - - LPXTG-motif cell wall anchor domain protein
DBDEDFDM_01089 0.0 - - - S - - - LPXTG-motif cell wall anchor domain protein
DBDEDFDM_01090 9.38e-134 - - - L - - - Helix-turn-helix domain
DBDEDFDM_01091 4.41e-269 ugpC - - E ko:K10112 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
DBDEDFDM_01092 7.97e-223 - - - K - - - Psort location Cytoplasmic, score
DBDEDFDM_01093 0.0 - - - KLT - - - Protein tyrosine kinase
DBDEDFDM_01094 1.05e-200 - - - O - - - Thioredoxin
DBDEDFDM_01096 1.48e-284 rpfB - - S ko:K21688 - ko00000 G5
DBDEDFDM_01097 1.27e-217 ksgA 2.1.1.182 - J ko:K02528 - ko00000,ko01000,ko03009 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
DBDEDFDM_01098 3.79e-213 ispE 2.7.1.148 - F ko:K00919 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
DBDEDFDM_01099 1.4e-145 - - - S - - - LytR cell envelope-related transcriptional attenuator
DBDEDFDM_01100 0.0 pcnA 2.7.7.19, 2.7.7.72 - J ko:K00970,ko:K00974 ko03013,ko03018,map03013,map03018 ko00000,ko00001,ko01000,ko03016,ko03019 Probable RNA and SrmB- binding site of polymerase A
DBDEDFDM_01101 3.18e-160 mutT4 - - L - - - Belongs to the Nudix hydrolase family
DBDEDFDM_01102 0.0 - - - M - - - Conserved repeat domain
DBDEDFDM_01103 0.0 mviN - - KLT ko:K03980 - ko00000,ko01011,ko02000 MviN-like protein
DBDEDFDM_01104 3.23e-257 trxB 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
DBDEDFDM_01105 1.14e-311 parB - - K ko:K03497 - ko00000,ko03000,ko03036,ko04812 Belongs to the ParB family
DBDEDFDM_01106 1.5e-229 parA - - D ko:K03496 - ko00000,ko03036,ko04812 CobQ CobB MinD ParA nucleotide binding domain protein
DBDEDFDM_01107 6.35e-163 rsmG 2.1.1.170 - J ko:K03501 - ko00000,ko01000,ko03009,ko03036 Specifically methylates the N7 position of a guanine in 16S rRNA
DBDEDFDM_01108 8.38e-120 jag - - S ko:K06346 - ko00000 Putative single-stranded nucleic acids-binding domain
DBDEDFDM_01109 2.11e-227 yidC - - U ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044,ko03029 Membrane protein insertase, YidC Oxa1 family
DBDEDFDM_01110 3.88e-20 rpmH - - J ko:K02914 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the bacterial ribosomal protein bL34 family
DBDEDFDM_01111 0.0 dnaA - - L ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
DBDEDFDM_01112 1.15e-259 dnaN 2.7.7.7 - L ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
DBDEDFDM_01113 5.36e-306 recF - - L ko:K03629 ko03440,map03440 ko00000,ko00001,ko03400 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
DBDEDFDM_01114 1.85e-123 - - - S - - - Protein of unknown function (DUF721)
DBDEDFDM_01115 0.0 gyrB 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DBDEDFDM_01116 0.0 gyrA 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DBDEDFDM_01117 2.04e-104 - - - S - - - Transmembrane domain of unknown function (DUF3566)
DBDEDFDM_01121 0.0 - - - T - - - Histidine kinase
DBDEDFDM_01122 1.69e-170 - - - K - - - helix_turn_helix, Lux Regulon
DBDEDFDM_01123 0.0 - - - I - - - PAP2 superfamily
DBDEDFDM_01124 0.0 - - - MV ko:K02004 - ko00000,ko00002,ko02000 MacB-like periplasmic core domain
DBDEDFDM_01125 8.48e-215 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
DBDEDFDM_01126 3.39e-40 - - - M - - - Domain of unknown function (DUF1906)
DBDEDFDM_01127 4.22e-181 - - - - - - - -
DBDEDFDM_01128 2.84e-47 - - - - - - - -
DBDEDFDM_01129 2.13e-49 - - - - - - - -
DBDEDFDM_01130 0.0 - 2.5.1.49 - E ko:K01740 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 Aminotransferase class-V
DBDEDFDM_01131 2.83e-201 - - - S - - - Putative ABC-transporter type IV
DBDEDFDM_01132 3.62e-212 pdxY 2.7.1.35 - H ko:K00868 ko00750,ko01100,map00750,map01100 ko00000,ko00001,ko01000 Phosphomethylpyrimidine kinase
DBDEDFDM_01133 0.0 sdhA 1.3.5.1, 1.3.5.4, 1.4.3.16 - C ko:K00239,ko:K00278 ko00020,ko00190,ko00250,ko00650,ko00720,ko00760,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00250,map00650,map00720,map00760,map01100,map01110,map01120,map01130,map01200,map05134 ko00000,ko00001,ko00002,ko01000 Succinate dehydrogenase flavoprotein subunit
DBDEDFDM_01134 0.0 dprA - - LU ko:K04096 - ko00000 DNA recombination-mediator protein A
DBDEDFDM_01135 0.0 comM - - O ko:K07391 - ko00000 Magnesium chelatase, subunit ChlI C-terminal
DBDEDFDM_01136 2.23e-93 yraN - - L ko:K07460 - ko00000 Belongs to the UPF0102 family
DBDEDFDM_01137 3.57e-235 sdhB 1.3.5.1, 1.3.5.4 - C ko:K00240 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 4Fe-4S dicluster domain
DBDEDFDM_01138 3.52e-151 safC - - S - - - O-methyltransferase
DBDEDFDM_01139 4.26e-222 fmt2 3.2.2.10 - S ko:K06966 ko00230,ko00240,map00230,map00240 ko00000,ko00001,ko01000 Belongs to the LOG family
DBDEDFDM_01140 4.79e-290 nhaA - - P ko:K03313 - ko00000,ko02000 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
DBDEDFDM_01141 2.12e-297 patB 4.4.1.8 - E ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko01000,ko01007 Aminotransferase, class I II
DBDEDFDM_01144 1.18e-309 clpX - - O ko:K03544 ko04112,map04112 ko00000,ko00001,ko03110 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
DBDEDFDM_01145 6.56e-164 clpP 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
DBDEDFDM_01146 4.05e-147 clpP1 3.4.21.92 - O ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
DBDEDFDM_01147 0.0 - - - P ko:K03281 - ko00000 Voltage gated chloride channel
DBDEDFDM_01148 1.62e-307 tig - - D ko:K03545 - ko00000 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
DBDEDFDM_01149 1.94e-316 rnd 3.1.13.5 - J ko:K03684 - ko00000,ko01000,ko03016 3'-5' exonuclease
DBDEDFDM_01150 1.94e-146 - - - S - - - Protein of unknown function (DUF3000)
DBDEDFDM_01151 5.19e-222 pflA 1.97.1.4 - C ko:K04069 - ko00000,ko01000 Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DBDEDFDM_01152 0.0 pflB 2.3.1.54 - C ko:K00656 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 ko00000,ko00001,ko01000 Pyruvate formate lyase-like
DBDEDFDM_01153 3.63e-54 - - - - - - - -
DBDEDFDM_01154 0.0 nadE 6.3.5.1 - H ko:K01950 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DBDEDFDM_01155 6.96e-286 - - - S - - - Peptidase dimerisation domain
DBDEDFDM_01157 2.38e-54 - - - P - - - ABC-type metal ion transport system permease component
DBDEDFDM_01158 2.76e-212 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
DBDEDFDM_01159 3.42e-134 ppiA 5.2.1.8 - G ko:K03767,ko:K03768 ko01503,ko04217,map01503,map04217 ko00000,ko00001,ko01000,ko03110,ko04147 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DBDEDFDM_01160 9.55e-66 - - - L ko:K07473 - ko00000,ko02048 RelB antitoxin
DBDEDFDM_01161 2.43e-87 - - - T - - - Toxic component of a toxin-antitoxin (TA) module
DBDEDFDM_01162 3.6e-266 - - - E - - - Belongs to the peptidase S1B family
DBDEDFDM_01163 6.15e-46 - - - - - - - -
DBDEDFDM_01164 5.58e-257 - - - S - - - HipA-like C-terminal domain
DBDEDFDM_01165 1.75e-285 hsdM 2.1.1.72, 3.1.21.3 - V ko:K01153,ko:K01154,ko:K03427 - ko00000,ko01000,ko02048 type I restriction modification DNA specificity domain
DBDEDFDM_01166 1.62e-53 - - - S - - - EcsC protein family
DBDEDFDM_01167 8.81e-197 - - - T - - - Eukaryotic phosphomannomutase
DBDEDFDM_01168 1.05e-85 - - - S - - - Zincin-like metallopeptidase
DBDEDFDM_01169 0.0 - - - - - - - -
DBDEDFDM_01170 0.0 - - - S - - - Glycosyl transferase, family 2
DBDEDFDM_01171 2.82e-72 whiB2 - - K ko:K18955 - ko00000,ko03000 Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
DBDEDFDM_01172 0.0 lytR2 - - K - - - Cell envelope-related transcriptional attenuator domain
DBDEDFDM_01173 0.0 - - - D ko:K03466 - ko00000,ko03036 FtsK/SpoIIIE family
DBDEDFDM_01174 6.69e-61 whiB - - K ko:K18955 - ko00000,ko03000 Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
DBDEDFDM_01175 0.0 pdtaS 2.7.13.3 - T ko:K00936 - ko00000,ko00002,ko01000,ko01001,ko02022 ATPase histidine kinase DNA gyrase B HSP90 domain protein
DBDEDFDM_01176 2.77e-193 hlyIII - - S ko:K11068 - ko00000,ko02042 Haemolysin-III related
DBDEDFDM_01177 1.6e-140 - - - - - - - -
DBDEDFDM_01179 1.67e-104 greA - - K ko:K03624 - ko00000,ko03021 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
DBDEDFDM_01180 8.53e-95 fkbP 5.2.1.8 - G ko:K01802 - ko00000,ko01000 Peptidyl-prolyl cis-trans
DBDEDFDM_01181 0.0 sdaA 4.3.1.17 - E ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko01000 Serine dehydratase alpha chain
DBDEDFDM_01182 4.4e-126 - - - - - - - -
DBDEDFDM_01184 3.42e-233 ppx 3.6.1.11, 3.6.1.40 - FP ko:K01524 ko00230,map00230 ko00000,ko00001,ko01000 Ppx/GppA phosphatase family
DBDEDFDM_01185 6.25e-138 - - - S ko:K09009 - ko00000 Protein of unknown function (DUF501)
DBDEDFDM_01187 7.41e-315 eno 4.2.1.11 - G ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
DBDEDFDM_01188 2.04e-194 pabC 2.6.1.42, 2.6.1.85, 4.1.3.38 - E ko:K00826,ko:K01665,ko:K02619,ko:K03342 ko00270,ko00280,ko00290,ko00770,ko00790,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map00790,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 branched-chain-amino-acid transaminase activity
DBDEDFDM_01189 0.0 pabB 2.6.1.85, 4.1.3.27, 4.1.3.38 - EH ko:K01657,ko:K01665,ko:K03342,ko:K13950 ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000,ko01007 chorismate binding enzyme
DBDEDFDM_01190 0.0 mfd - - L ko:K03723 ko03420,map03420 ko00000,ko00001,ko01000,ko03400 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DBDEDFDM_01191 3.48e-146 pth 3.1.1.29 - J ko:K01056 - ko00000,ko01000,ko03012 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
DBDEDFDM_01192 1.37e-49 - 2.3.1.183 - M ko:K03823 ko00440,ko01130,map00440,map01130 ko00000,ko00001,ko01000 Acetyltransferase (GNAT) domain
DBDEDFDM_01193 2.11e-50 - 2.3.1.183 - M ko:K03823 ko00440,ko01130,map00440,map01130 ko00000,ko00001,ko01000 Acetyltransferase (GNAT) domain
DBDEDFDM_01194 1.97e-186 rfbB2 3.6.3.40 - GM ko:K01990,ko:K09691,ko:K09693 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter
DBDEDFDM_01195 1.2e-194 - - - GM ko:K09692 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 ABC-2 type transporter
DBDEDFDM_01196 2.44e-252 - - - GM - - - GDP-mannose 4,6 dehydratase
DBDEDFDM_01197 2.58e-165 ispD 2.7.7.60 - I ko:K00991 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
DBDEDFDM_01199 2.13e-277 - - - I ko:K13663 - ko00000,ko01000 transferase activity, transferring acyl groups other than amino-acyl groups
DBDEDFDM_01200 0.0 - 2.7.8.14, 2.7.8.47 - M ko:K18704 - ko00000,ko01000 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
DBDEDFDM_01201 7.13e-264 - 2.7.8.14, 2.7.8.47 - M ko:K18704 - ko00000,ko01000 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
DBDEDFDM_01202 0.0 - - - S ko:K09118 - ko00000 Uncharacterised protein family (UPF0182)
DBDEDFDM_01203 3.84e-295 - 3.2.1.52 - G ko:K01207 ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501 ko00000,ko00001,ko00002,ko01000 Glycosyl hydrolase family 3 N-terminal domain protein
DBDEDFDM_01204 1.32e-251 - - - - - - - -
DBDEDFDM_01205 1.63e-192 - - - V ko:K02003,ko:K09810 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
DBDEDFDM_01206 1.25e-243 - - - V - - - N-Acetylmuramoyl-L-alanine amidase
DBDEDFDM_01208 1.51e-259 pheS 6.1.1.20 - J ko:K01889 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
DBDEDFDM_01209 2.62e-204 tsnR - - J ko:K03437 - ko00000,ko03016 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DBDEDFDM_01210 1.67e-173 - - - V ko:K02068 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
DBDEDFDM_01211 2.65e-175 - - - V ko:K02069 - ko00000,ko00002,ko02000 Uncharacterised protein family (UPF0014)
DBDEDFDM_01212 8.71e-61 - - - IQ - - - oxidoreductase activity
DBDEDFDM_01214 6.1e-135 - - - K - - - AraC-like ligand binding domain
DBDEDFDM_01215 1.12e-303 rutG - - F ko:K02824,ko:K03458 - ko00000,ko02000 Permease family
DBDEDFDM_01216 1.72e-204 - - - G - - - Phosphoglycerate mutase family
DBDEDFDM_01217 2.73e-65 - - - S ko:K06999 - ko00000 Phospholipase/Carboxylesterase
DBDEDFDM_01218 1.59e-238 - - - S - - - Conserved hypothetical protein 698
DBDEDFDM_01219 1.05e-185 - - - K - - - Bacterial regulatory helix-turn-helix protein, lysR family
DBDEDFDM_01220 1.3e-152 - - - E - - - haloacid dehalogenase-like hydrolase
DBDEDFDM_01221 0.0 - - - M - - - Glycosyltransferase like family 2
DBDEDFDM_01223 0.0 - 2.7.11.1 - S ko:K12132 - ko00000,ko01000,ko01001 PASTA domain
DBDEDFDM_01224 4.5e-162 - - - S ko:K06999 - ko00000 Phospholipase/Carboxylesterase
DBDEDFDM_01225 1.5e-96 fms 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins
DBDEDFDM_01226 1.72e-48 - - - - - - - -
DBDEDFDM_01227 2.36e-46 - - - S ko:K07069 - ko00000 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
DBDEDFDM_01228 3.35e-84 - - - S - - - Zincin-like metallopeptidase
DBDEDFDM_01229 3.68e-111 - - - S - - - Helix-turn-helix
DBDEDFDM_01230 4.68e-265 - - - S - - - Short C-terminal domain
DBDEDFDM_01231 1.1e-30 - - - - - - - -
DBDEDFDM_01233 6.04e-103 - - - K - - - Psort location Cytoplasmic, score
DBDEDFDM_01234 0.0 - - - KLT - - - Protein tyrosine kinase
DBDEDFDM_01235 4.93e-107 - - - S - - - Cupin 2, conserved barrel domain protein
DBDEDFDM_01236 6.35e-201 - - - J - - - Methyltransferase domain
DBDEDFDM_01237 6.33e-76 yccF - - S - - - Inner membrane component domain
DBDEDFDM_01238 2.73e-162 - - - E - - - Psort location Cytoplasmic, score 8.87
DBDEDFDM_01239 2.8e-50 - - - L ko:K07483 - ko00000 Psort location Cytoplasmic, score 8.87
DBDEDFDM_01240 4.3e-143 - - - L ko:K07483 - ko00000 Integrase core domain
DBDEDFDM_01244 8.1e-11 - - - - - - - -
DBDEDFDM_01245 5.77e-76 - - - S - - - competence protein
DBDEDFDM_01246 9.07e-151 - - - LU ko:K04096 - ko00000 DNA recombination-mediator protein A
DBDEDFDM_01247 1.27e-10 - - - L - - - Phage integrase, N-terminal SAM-like domain
DBDEDFDM_01248 1.9e-39 - - - - - - - -
DBDEDFDM_01250 5e-249 - - - L - - - Phage integrase, N-terminal SAM-like domain
DBDEDFDM_01251 9.28e-91 ychF - - J ko:K06942 - ko00000,ko03009 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
DBDEDFDM_01252 4.46e-137 ychF - - J ko:K06942 - ko00000,ko03009 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
DBDEDFDM_01253 2.46e-290 - 2.6.1.1, 2.6.1.2, 2.6.1.66, 2.6.1.83 - E ko:K00812,ko:K08969,ko:K10206,ko:K10907,ko:K14260,ko:K14261 ko00220,ko00250,ko00270,ko00290,ko00300,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00300,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase class I and II
DBDEDFDM_01254 1.14e-121 - - - P ko:K02072 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
DBDEDFDM_01255 1.26e-214 metN - - P ko:K02071 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DBDEDFDM_01256 1.5e-233 acoB 1.2.4.1, 1.2.4.4 - C ko:K00162,ko:K11381,ko:K21417 ko00010,ko00020,ko00280,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00280,map00620,map00640,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 br01601,ko00000,ko00001,ko00002,ko01000 Pyruvate 2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit
DBDEDFDM_01257 4.46e-238 acoA 1.2.4.1 - C ko:K00161,ko:K21416 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 br01601,ko00000,ko00001,ko00002,ko01000 Dehydrogenase E1 component
DBDEDFDM_01258 4.46e-183 - - - P ko:K02073 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 NLPA lipoprotein
DBDEDFDM_01259 1.24e-239 - - - G - - - Glycosyl hydrolases family 43
DBDEDFDM_01260 2.29e-240 - - - K - - - Periplasmic binding protein domain
DBDEDFDM_01261 1.78e-288 - - - I - - - Serine aminopeptidase, S33
DBDEDFDM_01262 9.05e-12 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
DBDEDFDM_01263 2.87e-56 - - - S - - - Protein of unknown function (DUF2442)
DBDEDFDM_01264 2.73e-19 - - - S - - - Domain of unknown function (DUF4160)
DBDEDFDM_01265 8.24e-21 - - - K - - - Helix-turn-helix domain
DBDEDFDM_01268 0.0 gdhA 1.4.1.4 - E ko:K00262 ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100 ko00000,ko00001,ko01000 Belongs to the Glu Leu Phe Val dehydrogenases family
DBDEDFDM_01269 1.88e-161 gntR - - K - - - FCD
DBDEDFDM_01270 9.15e-79 mscL - - M ko:K03282 - ko00000,ko02000 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
DBDEDFDM_01271 0.0 - 3.2.1.55 GH51 G ko:K01209 ko00520,map00520 ko00000,ko00001,ko01000 arabinose metabolic process
DBDEDFDM_01274 0.0 - - - G - - - Glycosyl hydrolase family 20, domain 2
DBDEDFDM_01275 1.71e-242 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
DBDEDFDM_01276 6.23e-102 ulaC 2.7.1.194 - G ko:K02821 ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
DBDEDFDM_01277 1.49e-54 - 2.7.1.194 - G ko:K02822 ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko01000,ko02000 PTS system, Lactose/Cellobiose specific IIB subunit
DBDEDFDM_01278 3.47e-14 ulaA - - S ko:K03475 ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko02000 PTS system sugar-specific permease component
DBDEDFDM_01279 2.71e-307 ulaA - - S ko:K03475 ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060 ko00000,ko00001,ko00002,ko02000 PTS system sugar-specific permease component
DBDEDFDM_01280 5.11e-176 - - - S ko:K07043 - ko00000 Protein of unknown function DUF45
DBDEDFDM_01281 2.68e-110 dps - - P ko:K04047 - ko00000,ko03036 Belongs to the Dps family
DBDEDFDM_01282 2.83e-240 - - - EG - - - EamA-like transporter family
DBDEDFDM_01283 3.36e-306 - - - P ko:K03699 - ko00000,ko02042 Transporter associated domain
DBDEDFDM_01284 2.69e-121 - - - K ko:K02529 - ko00000,ko03000 helix_turn _helix lactose operon repressor
DBDEDFDM_01285 6.08e-154 cah 4.2.1.1 - P ko:K01673 ko00910,map00910 ko00000,ko00001,ko01000 Reversible hydration of carbon dioxide
DBDEDFDM_01286 1.01e-137 ahpC 1.11.1.15 - O ko:K03386 ko04214,map04214 ko00000,ko00001,ko01000,ko04147 C-terminal domain of 1-Cys peroxiredoxin
DBDEDFDM_01287 0.0 - 1.8.1.9 - C ko:K00384 ko00450,map00450 ko00000,ko00001,ko01000 Thioredoxin domain
DBDEDFDM_01288 0.0 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
DBDEDFDM_01289 1.95e-308 - - - EGP ko:K08177 - ko00000,ko02000 Major Facilitator Superfamily
DBDEDFDM_01290 0.0 ppc 4.1.1.31 - H ko:K01595 ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
DBDEDFDM_01291 0.0 - - - S - - - Threonine/Serine exporter, ThrE
DBDEDFDM_01292 7.63e-228 - - - S - - - Amidohydrolase family
DBDEDFDM_01293 4.09e-249 - - - S - - - Protein conserved in bacteria
DBDEDFDM_01294 1.2e-261 trpS 6.1.1.2 - J ko:K01867 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Belongs to the class-I aminoacyl-tRNA synthetase family
DBDEDFDM_01295 5.42e-67 - - - S - - - Protein of unknown function (DUF3073)
DBDEDFDM_01296 1.05e-114 - - - K - - - LytTr DNA-binding domain
DBDEDFDM_01297 2.2e-82 - - - T - - - protein histidine kinase activity
DBDEDFDM_01299 1.99e-22 - - - K - - - MerR family regulatory protein
DBDEDFDM_01300 7.11e-160 pyrE 2.4.2.10 - F ko:K00762 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
DBDEDFDM_01301 1.67e-228 pyrD 1.3.1.14 - F ko:K17828 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
DBDEDFDM_01302 1.77e-200 pyrK - - C ko:K02823 ko00240,ko01100,map00240,map01100 ko00000,ko00001 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
DBDEDFDM_01303 3.99e-231 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the OMP decarboxylase family. Type 2 subfamily
DBDEDFDM_01304 0.0 pyrC 3.5.2.3 - F ko:K01465 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
DBDEDFDM_01305 1.83e-96 pyrI - - F ko:K00610 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002 Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
DBDEDFDM_01306 7.76e-234 pyrB 2.1.3.2 - F ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the ATCase OTCase family
DBDEDFDM_01307 0.0 glnE 2.7.7.42, 2.7.7.89 - H ko:K00982 - ko00000,ko01000 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
DBDEDFDM_01309 7.24e-203 metF 1.5.1.20 - E ko:K00297 ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523 ko00000,ko00001,ko00002,ko01000 Methylenetetrahydrofolate reductase
DBDEDFDM_01310 0.0 metE 2.1.1.14 - E ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
DBDEDFDM_01311 5.84e-129 sixA - - T ko:K08296 - ko00000,ko01000 Phosphoglycerate mutase family
DBDEDFDM_01312 3.32e-264 trmI 2.1.1.219, 2.1.1.220 - J ko:K07442 - ko00000,ko01000,ko03016 Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
DBDEDFDM_01313 9.76e-229 - - - I - - - alpha/beta hydrolase fold
DBDEDFDM_01314 1.17e-34 - - - S - - - Rard protein
DBDEDFDM_01315 6.37e-118 - - - E - - - Rard protein
DBDEDFDM_01316 6.56e-40 - - - - - - - -
DBDEDFDM_01318 1.37e-78 - - - S - - - Short C-terminal domain
DBDEDFDM_01319 7.82e-240 cbh 3.5.1.24 - M ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 ko00000,ko00001,ko01000 Linear amide C-N hydrolase, choloylglycine hydrolase family protein
DBDEDFDM_01320 1.65e-62 - - - S ko:K07126 - ko00000 Sel1-like repeats.
DBDEDFDM_01321 6.29e-192 - - - S ko:K11206 - ko00000,ko01000 Carbon-nitrogen hydrolase
DBDEDFDM_01322 1.63e-231 ylmA 3.6.3.34 - P ko:K02013 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
DBDEDFDM_01323 3.37e-312 glgA 2.4.1.342 GT4 G ko:K16148 ko00500,ko01100,map00500,map01100 ko00000,ko00001,ko01000,ko01003 Starch synthase catalytic domain
DBDEDFDM_01324 5.23e-107 - - - - - - - -
DBDEDFDM_01325 0.0 gltD 1.4.1.13, 1.4.1.14 - C ko:K00266 ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
DBDEDFDM_01326 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 - E ko:K00265,ko:K00284 ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 glutamate synthase NADPH large subunit
DBDEDFDM_01327 0.0 tetM - - J ko:K18220 - br01600,ko00000,ko01504 Elongation factor G, domain IV
DBDEDFDM_01328 0.0 aspC 2.6.1.1, 2.6.1.2, 2.6.1.66 - E ko:K00812,ko:K08969,ko:K10907,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Aminotransferase, class I II
DBDEDFDM_01329 1.38e-311 hemN - - H - - - Involved in the biosynthesis of porphyrin-containing compound
DBDEDFDM_01330 0.0 lepA - - M ko:K03596 ko05134,map05134 ko00000,ko00001 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
DBDEDFDM_01331 3.91e-46 rpsT - - J ko:K02968 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 16S ribosomal RNA
DBDEDFDM_01332 1.61e-175 - - - S - - - UPF0126 domain
DBDEDFDM_01333 9.66e-126 - - - T - - - RNA ligase
DBDEDFDM_01334 1.65e-61 - - - S - - - phosphoesterase or phosphohydrolase
DBDEDFDM_01335 1.58e-287 ilvE 2.6.1.42 - E ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000,ko01007 Amino-transferase class IV
DBDEDFDM_01336 1.78e-121 - - - - - - - -
DBDEDFDM_01337 7.12e-229 - - - S - - - Protein of unknown function DUF58
DBDEDFDM_01338 1.43e-250 moxR - - S ko:K03924 - ko00000,ko01000 ATPase family associated with various cellular activities (AAA)
DBDEDFDM_01339 2.11e-185 ung 3.2.2.27 - L ko:K03648 ko03410,ko05340,map03410,map05340 ko00000,ko00001,ko01000,ko03400 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
DBDEDFDM_01340 4.24e-105 - - - S - - - LytR cell envelope-related transcriptional attenuator
DBDEDFDM_01341 1.49e-58 cspA - - K ko:K03704 - ko00000,ko03000 'Cold-shock' DNA-binding domain
DBDEDFDM_01342 0.0 groL - - O ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
DBDEDFDM_01343 8.25e-53 - - - S - - - Proteins of 100 residues with WXG
DBDEDFDM_01344 1.05e-226 - - - - - - - -
DBDEDFDM_01345 1.23e-171 phoP - - KT ko:K02483 - ko00000,ko02022 Response regulator receiver domain protein
DBDEDFDM_01346 0.0 phoR 2.7.13.3 - T ko:K02484 - ko00000,ko01000,ko01001,ko02022 ATPase histidine kinase DNA gyrase B HSP90 domain protein
DBDEDFDM_01347 1.23e-87 cspB - - K ko:K03704 - ko00000,ko03000 'Cold-shock' DNA-binding domain
DBDEDFDM_01348 1.24e-259 - - - S - - - Protein of unknown function (DUF3027)
DBDEDFDM_01349 2.42e-237 uspA - - T - - - Belongs to the universal stress protein A family
DBDEDFDM_01351 6.04e-143 clpC - - O ko:K03696 ko01100,map01100 ko00000,ko03110 ATPase family associated with various cellular activities (AAA)
DBDEDFDM_01355 1.51e-301 - - - S - - - Domain of Unknown Function (DUF349)
DBDEDFDM_01356 0.0 hisS 6.1.1.21 - J ko:K01892 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Histidyl-tRNA synthetase
DBDEDFDM_01357 0.0 aspS 6.1.1.12 - J ko:K01876 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
DBDEDFDM_01358 7.55e-84 - - - K - - - helix_turn_helix, Lux Regulon
DBDEDFDM_01359 3.21e-120 - - - S - - - Aminoacyl-tRNA editing domain
DBDEDFDM_01360 2.08e-180 gluA - - E ko:K10008 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATP-binding protein of ABC transporter for glutamate K02028
DBDEDFDM_01361 5.91e-196 gluB - - ET ko:K10005 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Belongs to the bacterial solute-binding protein 3 family
DBDEDFDM_01362 2.44e-143 gluC - - E ko:K10006 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
DBDEDFDM_01363 1.88e-252 gluD - - E ko:K10007 ko02010,map02010 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
DBDEDFDM_01364 2.57e-151 - - - S - - - Polyphosphate kinase 2 (PPK2)
DBDEDFDM_01365 7.99e-87 - - - S - - - Polyphosphate kinase 2 (PPK2)
DBDEDFDM_01366 0.0 - - - L - - - DEAD DEAH box helicase
DBDEDFDM_01367 0.0 rarA - - L ko:K07478 - ko00000 Recombination factor protein RarA
DBDEDFDM_01369 0.0 - - - EGP - - - Major Facilitator Superfamily
DBDEDFDM_01370 0.0 - - - GP ko:K16785,ko:K16786,ko:K16787 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ABC transporter, ATP-binding protein
DBDEDFDM_01371 2.4e-136 - - - U - - - Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
DBDEDFDM_01373 2.21e-178 ppgK 2.7.1.2, 2.7.1.63 - GK ko:K00845,ko:K00886 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
DBDEDFDM_01375 6.09e-152 - - - K - - - helix_turn_helix, Lux Regulon
DBDEDFDM_01376 0.0 - - - T - - - Histidine kinase
DBDEDFDM_01377 2.17e-151 - - - S - - - Domain of unknown function (DUF5067)
DBDEDFDM_01378 8.71e-176 - - - S ko:K06890 - ko00000 Belongs to the BI1 family
DBDEDFDM_01379 9.57e-218 - - - EG - - - EamA-like transporter family
DBDEDFDM_01380 4.06e-156 ywaC 2.7.6.5 - S ko:K07816 ko00230,map00230 ko00000,ko00001,ko01000 Region found in RelA / SpoT proteins
DBDEDFDM_01381 0.0 miaB 2.8.4.3 - H ko:K06168 - ko00000,ko01000,ko03016 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DBDEDFDM_01382 1.26e-235 miaA 2.5.1.75 - F ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 ko00000,ko00001,ko01000,ko01006,ko03016 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
DBDEDFDM_01383 1.89e-176 fic - - D ko:K04095 - ko00000,ko03036 Fic/DOC family
DBDEDFDM_01384 0.0 ftsK - - D ko:K03466 - ko00000,ko03036 FtsK SpoIIIE family protein
DBDEDFDM_01385 3.96e-156 pgsA 2.7.8.41, 2.7.8.5 - I ko:K00995,ko:K08744 ko00564,ko01100,map00564,map01100 ko00000,ko00001,ko01000 Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DBDEDFDM_01386 1.14e-124 cinA 3.5.1.42 - S ko:K03743 ko00760,map00760 ko00000,ko00001,ko01000 Belongs to the CinA family
DBDEDFDM_01387 2.53e-106 - - - K - - - Helix-turn-helix XRE-family like proteins
DBDEDFDM_01388 3.96e-53 - - - S - - - Protein of unknown function (DUF3046)
DBDEDFDM_01389 7.71e-276 recA - - L ko:K03553 ko03440,map03440 ko00000,ko00001,ko00002,ko03400 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
DBDEDFDM_01390 1.97e-95 recX - - S ko:K03565 - ko00000,ko03400 Modulates RecA activity
DBDEDFDM_01391 1.98e-36 - - - K - - - Winged helix DNA-binding domain
DBDEDFDM_01393 3.68e-152 hpf - - J ko:K05808 - ko00000,ko03009 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DBDEDFDM_01394 0.0 secA - - U ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 ko00000,ko00001,ko00002,ko02044 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
DBDEDFDM_01395 2.08e-242 trpD 2.4.2.18 - F ko:K00766 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DBDEDFDM_01396 2.64e-141 - - - - - - - -
DBDEDFDM_01397 8.72e-173 plsC2 2.3.1.51 - I ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko01004 Phosphate acyltransferases
DBDEDFDM_01398 0.0 pknL 2.7.11.1 - KLT ko:K08884,ko:K12132 - ko00000,ko01000,ko01001 PASTA
DBDEDFDM_01399 7.75e-258 idsA 2.5.1.1, 2.5.1.10, 2.5.1.29 - H ko:K13787 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01006 Belongs to the FPP GGPP synthase family
DBDEDFDM_01400 1.98e-157 - - - - - - - -
DBDEDFDM_01401 3.09e-252 sigA - - K ko:K03086 - ko00000,ko03021 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
DBDEDFDM_01402 0.0 gyrB2 5.99.1.3 - L ko:K02470 - ko00000,ko01000,ko03032,ko03400 DNA topoisomerase (ATP-hydrolyzing)
DBDEDFDM_01403 0.0 aspA 4.3.1.1 - E ko:K01744 ko00250,ko01100,map00250,map01100 ko00000,ko00001,ko01000 Fumarase C C-terminus
DBDEDFDM_01404 3.25e-58 - - - S - - - Protein of unknown function (DUF2975)
DBDEDFDM_01407 2.54e-309 - 6.3.1.12 - S ko:K17810 - ko00000,ko01000 ATP-grasp
DBDEDFDM_01408 1.46e-165 - 5.1.1.13 - G ko:K01779 ko00250,ko01054,map00250,map01054 ko00000,ko00001,ko01000 Belongs to the aspartate glutamate racemases family
DBDEDFDM_01409 0.0 smc - - D ko:K03529 - ko00000,ko03036 Required for chromosome condensation and partitioning
DBDEDFDM_01410 4.07e-68 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Mur ligase middle domain
DBDEDFDM_01411 5.39e-289 folC 6.3.2.12, 6.3.2.17 - H ko:K11754 ko00790,ko01100,map00790,map01100 ko00000,ko00001,ko00002,ko01000 Mur ligase middle domain
DBDEDFDM_01413 1.25e-124 - - - F - - - NUDIX domain
DBDEDFDM_01414 0.0 pepP 3.4.11.9 - E ko:K01262 - ko00000,ko01000,ko01002 Aminopeptidase P, N-terminal domain
DBDEDFDM_01415 0.0 - - - P ko:K02031,ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
DBDEDFDM_01416 3.74e-249 dppC - - EP ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
DBDEDFDM_01417 5.3e-243 dppB - - EP ko:K02033 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
DBDEDFDM_01418 0.0 - - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding proteins, family 5 Middle
DBDEDFDM_01419 4.41e-309 nagA 3.5.1.25 - G ko:K01443 ko00520,ko01130,map00520,map01130 ko00000,ko00001,ko01000 Amidohydrolase family
DBDEDFDM_01420 5.93e-196 nagB 3.5.99.6 - G ko:K02564 ko00520,ko01100,map00520,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
DBDEDFDM_01421 5.86e-276 - - - GK - - - ROK family
DBDEDFDM_01422 8.04e-168 cutC - - P ko:K06201 - ko00000 Participates in the control of copper homeostasis
DBDEDFDM_01423 5.33e-286 - 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
DBDEDFDM_01424 2.87e-217 - 2.7.1.4 - G ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 ko00000,ko00001,ko01000 pfkB family carbohydrate kinase
DBDEDFDM_01425 5.3e-301 - - - G - - - Major Facilitator Superfamily
DBDEDFDM_01426 8.3e-109 dtd - - J ko:K07560 - ko00000,ko01000,ko03016 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
DBDEDFDM_01429 2.52e-226 ftsQ - - D ko:K03589 ko04112,map04112 ko00000,ko00001,ko03036 Cell division protein FtsQ
DBDEDFDM_01430 0.0 murC 6.3.2.8 - M ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Belongs to the MurCDEF family
DBDEDFDM_01431 3.15e-276 murG 2.4.1.227, 6.3.2.8 GT28 M ko:K01924,ko:K02563 ko00471,ko00550,ko01100,ko01502,ko04112,map00471,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DBDEDFDM_01432 4.49e-297 ftsW 2.4.1.227 GT28 D ko:K02563,ko:K03588 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 ko00000,ko00001,ko01000,ko01011,ko02000,ko03036 Belongs to the SEDS family
DBDEDFDM_01433 0.0 murD 6.3.2.9 - M ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 ko00000,ko00001,ko01000,ko01011 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
DBDEDFDM_01434 8.76e-261 mraY 2.7.8.13 - M ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DBDEDFDM_01435 0.0 murF 6.3.2.10 - M ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
DBDEDFDM_01436 2.48e-231 - - - M - - - Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DBDEDFDM_01437 0.0 ftsI 3.4.16.4 - M ko:K03587 ko00550,ko01501,map00550,map01501 ko00000,ko00001,ko01000,ko01011,ko03036 Penicillin-binding protein, transpeptidase domain protein
DBDEDFDM_01438 7.39e-27 - - - D - - - Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
DBDEDFDM_01439 1.93e-215 - - - G ko:K02026 - ko00000,ko00002,ko02000 ABC transporter permease
DBDEDFDM_01440 3.93e-223 - - - G ko:K02025 - ko00000,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
DBDEDFDM_01441 1.34e-314 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
DBDEDFDM_01442 0.0 trpE 4.1.3.27 - E ko:K01657 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DBDEDFDM_01443 2.68e-96 hisI 3.5.4.19, 3.6.1.31 - E ko:K01496,ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
DBDEDFDM_01444 1.82e-179 hisF 4.1.3.27 - E ko:K01657,ko:K02500 ko00340,ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00340,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 ko00000,ko00001,ko00002,ko01000 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
DBDEDFDM_01445 2.19e-291 rlmN 2.1.1.192 - J ko:K06941 - ko00000,ko01000,ko03009 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
DBDEDFDM_01446 1.27e-226 cdsA 2.7.7.41 - I ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 ko00000,ko00001,ko00002,ko01000 Cytidylyltransferase family
DBDEDFDM_01447 7.62e-120 frr - - J ko:K02838 - ko00000,ko03012 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
DBDEDFDM_01448 6.31e-171 pyrH 2.7.4.22 - F ko:K09903 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko01000 Catalyzes the reversible phosphorylation of UMP to UDP
DBDEDFDM_01449 3.16e-164 - - - S - - - alpha beta
DBDEDFDM_01450 4.78e-188 tsf - - J ko:K02357 - ko00000,ko03012,ko03029 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
DBDEDFDM_01451 3.07e-188 rpsB - - J ko:K02967 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Belongs to the universal ribosomal protein uS2 family
DBDEDFDM_01452 4.26e-113 def 3.5.1.88 - J ko:K01462 - ko00000,ko01000 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
DBDEDFDM_01453 0.0 fadD3 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 long-chain-fatty acid CoA ligase
DBDEDFDM_01454 3.59e-118 - - - - - - - -
DBDEDFDM_01455 1.59e-255 guaB3 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 IMP dehydrogenase family protein
DBDEDFDM_01456 1.11e-305 icd 1.1.1.42 - C ko:K00031 ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146 br01601,ko00000,ko00001,ko00002,ko01000 Belongs to the isocitrate and isopropylmalate dehydrogenases family
DBDEDFDM_01457 4.77e-100 - - - G - - - ABC transporter substrate-binding protein
DBDEDFDM_01458 1.57e-223 - - - G - - - ABC transporter substrate-binding protein
DBDEDFDM_01459 0.0 fadD1 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 AMP-binding enzyme
DBDEDFDM_01460 2.21e-165 - - - M - - - Peptidase family M23
DBDEDFDM_01462 2.66e-249 tsaD 2.3.1.234 - O ko:K01409 - ko00000,ko01000,ko03016 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
DBDEDFDM_01463 4.23e-135 rimI 2.3.1.128 - K ko:K03789 - ko00000,ko01000,ko03009 FR47-like protein
DBDEDFDM_01464 1.15e-202 yeaZ - - O ko:K14742 - ko00000,ko03016 Glycoprotease family
DBDEDFDM_01465 3.13e-153 tsaE - - S ko:K06925 - ko00000,ko03016 Threonylcarbamoyl adenosine biosynthesis protein TsaE
DBDEDFDM_01466 3.02e-231 holA 2.7.7.7 - L ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 DNA polymerase III delta subunit
DBDEDFDM_01467 0.0 comEC - - S ko:K02238 - ko00000,ko00002,ko02044 Competence protein
DBDEDFDM_01468 6.32e-135 comEA - - L ko:K02237 - ko00000,ko00002,ko02044 Helix-hairpin-helix motif
DBDEDFDM_01469 3.21e-286 - - - S - - - Protein of unknown function DUF262
DBDEDFDM_01470 0.0 pyrF 4.1.1.23 - F ko:K01591 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Essential for recycling GMP and indirectly, cGMP
DBDEDFDM_01471 0.0 carB 6.3.5.5 - EF ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Carbamoyl-phosphate synthetase large chain, oligomerisation domain
DBDEDFDM_01472 1.13e-197 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the CarA family
DBDEDFDM_01473 4.5e-57 carA 6.3.5.5 - F ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the CarA family
DBDEDFDM_01474 1.01e-150 nusB - - K ko:K03625 - ko00000,ko03009,ko03021 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DBDEDFDM_01475 3.8e-135 efp - - J ko:K02356 - ko00000,ko03012 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DBDEDFDM_01477 4.07e-164 - - - EGP - - - Transmembrane secretion effector
DBDEDFDM_01478 3.46e-100 - - - EGP - - - Transmembrane secretion effector
DBDEDFDM_01479 0.0 - - - S - - - Esterase-like activity of phytase
DBDEDFDM_01480 5.83e-293 tuf - - J ko:K02358 - ko00000,ko03012,ko03029,ko04147 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
DBDEDFDM_01481 0.0 fusA - - J ko:K02355 - ko00000,ko03012,ko03029 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
DBDEDFDM_01482 9.4e-105 rpsG - - J ko:K02992 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
DBDEDFDM_01483 5.77e-81 rpsL - - J ko:K02950 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
DBDEDFDM_01485 4.45e-254 ltaE 4.1.2.48 - E ko:K01620 ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230 ko00000,ko00001,ko01000 Beta-eliminating lyase
DBDEDFDM_01486 4.41e-291 - - - M - - - Glycosyl transferase 4-like domain
DBDEDFDM_01488 0.0 - - - M - - - Parallel beta-helix repeats
DBDEDFDM_01489 3.86e-298 purT 2.1.2.2 - F ko:K08289 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
DBDEDFDM_01490 2.05e-177 purC 6.3.2.6 - F ko:K01923 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the SAICAR synthetase family
DBDEDFDM_01493 1.62e-193 - 2.6.1.33 - M ko:K20429 - ko00000,ko01000 DegT/DnrJ/EryC1/StrS aminotransferase family
DBDEDFDM_01494 1.26e-244 - - - V - - - Acetyltransferase (GNAT) domain
DBDEDFDM_01495 0.0 murE 6.3.2.13 - M ko:K01928 ko00300,ko00550,map00300,map00550 ko00000,ko00001,ko01000,ko01011 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DBDEDFDM_01496 9.94e-149 sigH - - K ko:K03088 - ko00000,ko03021 Belongs to the sigma-70 factor family. ECF subfamily
DBDEDFDM_01497 3.35e-84 - - - - - - - -
DBDEDFDM_01498 6.49e-249 - 5.1.3.3 - G ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Aldose 1-epimerase
DBDEDFDM_01499 3.63e-228 ispH 1.17.7.4 - IM ko:K03527 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
DBDEDFDM_01501 2.47e-118 ybaK - - J ko:K03976 - ko00000,ko01000,ko03016 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DBDEDFDM_01502 3.39e-254 gap 1.2.1.12 - G ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
DBDEDFDM_01503 1.69e-172 - 2.7.6.2 - H ko:K00949 ko00730,ko01100,map00730,map01100 ko00000,ko00001,ko01000 Thiamin pyrophosphokinase, vitamin B1 binding domain
DBDEDFDM_01504 2.74e-90 - - - S - - - Spermine/spermidine synthase domain
DBDEDFDM_01505 3.07e-137 infC - - J ko:K02520 - ko00000,ko03012,ko03029 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
DBDEDFDM_01506 3.31e-35 rpmI - - J ko:K02916 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L35
DBDEDFDM_01507 5.46e-81 rplT - - J ko:K02887 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
DBDEDFDM_01508 8e-227 xerD - - D ko:K03733,ko:K04763 - ko00000,ko03036 recombinase XerD
DBDEDFDM_01509 1.86e-194 soj - - D ko:K03496 - ko00000,ko03036,ko04812 CobQ CobB MinD ParA nucleotide binding domain protein
DBDEDFDM_01510 1.68e-193 scpA - - D ko:K05896 - ko00000,ko03036 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
DBDEDFDM_01511 6.08e-145 scpB - - D ko:K06024 - ko00000,ko03036 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
DBDEDFDM_01512 4.96e-190 - 3.6.1.55 - F ko:K03574 - ko00000,ko01000,ko03400 NUDIX hydrolase
DBDEDFDM_01513 0.0 nadA 2.5.1.72 - H ko:K03517 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
DBDEDFDM_01514 0.0 nadB 1.4.3.16, 2.4.2.19 - H ko:K00278,ko:K00767 ko00250,ko00760,ko01100,map00250,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of L-aspartate to iminoaspartate
DBDEDFDM_01515 4.54e-209 nadC 2.4.2.19 - H ko:K00767 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko00002,ko01000 Quinolinate phosphoribosyl transferase, N-terminal domain
DBDEDFDM_01516 6.17e-299 iscS1 2.8.1.7 - E ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Aminotransferase class-V
DBDEDFDM_01517 0.0 typA - - T ko:K06207 - ko00000 Elongation factor G C-terminus
DBDEDFDM_01518 1.91e-119 - - - - - - - -
DBDEDFDM_01519 1.18e-252 pheA 4.2.1.51, 5.4.99.5 - E ko:K04518,ko:K14170 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Prephenate dehydratase
DBDEDFDM_01520 7.31e-246 tyrA 1.3.1.12 - E ko:K00210,ko:K04517 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Prephenate dehydrogenase
DBDEDFDM_01521 3.41e-36 - - - - - - - -
DBDEDFDM_01522 1.23e-177 acnA 4.2.1.3 - C ko:K01681 ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
DBDEDFDM_01524 1.13e-223 - - - S - - - Protein conserved in bacteria
DBDEDFDM_01525 0.0 ilvD 4.2.1.9 - H ko:K01687 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 ko00000,ko00001,ko00002,ko01000 Belongs to the IlvD Edd family
DBDEDFDM_01526 9.87e-70 rpoZ 2.7.7.6 - K ko:K03060 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
DBDEDFDM_01527 7.86e-285 metK 2.5.1.6 - H ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
DBDEDFDM_01528 0.0 priA - - L ko:K04066 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DBDEDFDM_01530 2.48e-165 - 3.8.1.2 - S ko:K01560,ko:K07025 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 ko00000,ko00001,ko01000 Haloacid dehalogenase-like hydrolase
DBDEDFDM_01531 3.7e-233 fmt 2.1.2.9 - J ko:K00604 ko00670,ko00970,map00670,map00970 ko00000,ko00001,ko01000 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DBDEDFDM_01532 1.82e-176 serB 3.1.3.3 - E ko:K01079 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko01009 haloacid dehalogenase-like hydrolase
DBDEDFDM_01533 0.0 arc - - O ko:K13527 ko03050,map03050 ko00000,ko00001,ko00002,ko03051 AAA ATPase forming ring-shaped complexes
DBDEDFDM_01534 0.0 dop 3.5.1.119 - S ko:K20814 - ko00000,ko01000,ko03051 Pup-ligase protein
DBDEDFDM_01535 1.98e-203 - 3.1.3.25 - G ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 ko00000,ko00001,ko00002,ko01000 Inositol monophosphatase family
DBDEDFDM_01536 1.05e-28 pup - - S ko:K13570 - ko00000,ko04121 Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation
DBDEDFDM_01537 0.0 pafA 6.3.1.19 - O ko:K13571 - ko00000,ko00002,ko01000,ko03051 Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
DBDEDFDM_01538 4.7e-57 hup - - L ko:K03530 - ko00000,ko03032,ko03036,ko03400 Belongs to the bacterial histone-like protein family
DBDEDFDM_01539 0.0 - - - S - - - Lysylphosphatidylglycerol synthase TM region
DBDEDFDM_01540 0.0 purB 4.3.2.2 - F ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Adenylosuccinate lyase C-terminal
DBDEDFDM_01541 0.0 - - - S - - - PGAP1-like protein
DBDEDFDM_01543 9.23e-117 - - - - - - - -
DBDEDFDM_01544 2.85e-198 - - - S ko:K07114 - ko00000,ko02000 von Willebrand factor (vWF) type A domain
DBDEDFDM_01545 1.92e-38 - - - S ko:K07114 - ko00000,ko02000 von Willebrand factor (vWF) type A domain
DBDEDFDM_01546 0.0 purL 6.3.5.3 - F ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 CobB/CobQ-like glutamine amidotransferase domain
DBDEDFDM_01547 1.5e-138 - - - - - - - -
DBDEDFDM_01548 2.99e-138 - - - S - - - Protein of unknown function (DUF4230)
DBDEDFDM_01549 1.33e-189 nnrE - - L - - - Uracil DNA glycosylase superfamily
DBDEDFDM_01550 5.05e-22 - - - K - - - DNA-binding transcription factor activity
DBDEDFDM_01551 1.64e-90 gloA - - E - - - Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
DBDEDFDM_01552 9.82e-45 - - - - - - - -
DBDEDFDM_01553 0.0 - - - L ko:K03502 - ko00000,ko03400 DNA-damage repair protein (DNA polymerase IV) K00961
DBDEDFDM_01554 0.0 purF 2.4.2.14 - F ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
DBDEDFDM_01555 1.21e-244 purM 6.3.3.1 - F ko:K01933 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Phosphoribosylformylglycinamidine cyclo-ligase
DBDEDFDM_01556 5.35e-307 purD 6.3.3.1, 6.3.4.13 - F ko:K01945,ko:K11788 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the GARS family
DBDEDFDM_01557 0.0 - - - M - - - Psort location CytoplasmicMembrane, score 9.26
DBDEDFDM_01558 0.0 - - - S - - - Putative esterase
DBDEDFDM_01559 0.0 lysX - - S - - - Uncharacterised conserved protein (DUF2156)
DBDEDFDM_01561 1.64e-209 - - - P ko:K02077 - ko00000,ko00002,ko02000 Zinc-uptake complex component A periplasmic
DBDEDFDM_01562 2.69e-180 - - - S - - - cobalamin synthesis protein
DBDEDFDM_01563 6.47e-64 rpmB - - J ko:K02902 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal L28 family
DBDEDFDM_01564 4.85e-65 rpsN - - J ko:K02954 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DBDEDFDM_01565 7.57e-57 rpmE2 - - J ko:K02909 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L31
DBDEDFDM_01566 3.05e-21 rpmJ - - J ko:K02919 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein L36
DBDEDFDM_01567 1.07e-32 - - - J ko:K02911 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Ribosomal L32p protein family
DBDEDFDM_01568 3.55e-258 - - - S ko:K07089 - ko00000 Predicted permease
DBDEDFDM_01569 2.62e-197 - - - S - - - TIGRFAM TIGR03943 family protein
DBDEDFDM_01570 7.27e-59 - - - - - - - -
DBDEDFDM_01571 2.66e-96 fur - - P ko:K03711 - ko00000,ko03000 Belongs to the Fur family
DBDEDFDM_01572 9.45e-183 purK 6.3.4.18 - F ko:K01589 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
DBDEDFDM_01573 5.14e-111 purE 5.4.99.18 - F ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
DBDEDFDM_01574 1.04e-25 yogA - - C - - - Zinc-binding dehydrogenase
DBDEDFDM_01575 1.42e-277 alaS 6.1.1.7 - J ko:K01872 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DBDEDFDM_01576 6.58e-99 ruvX - - L ko:K07447 - ko00000,ko01000 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
DBDEDFDM_01577 3.3e-249 mltG - - S ko:K07082 - ko00000 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
DBDEDFDM_01578 4.35e-68 - 3.4.23.43 - S ko:K02654 - ko00000,ko00002,ko01000,ko01002,ko02035,ko02044 Type IV leader peptidase family
DBDEDFDM_01579 3.17e-280 aroC 4.2.3.5 - E ko:K01736 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
DBDEDFDM_01580 0.0 aroB 2.7.1.71, 4.2.3.4 - H ko:K01735,ko:K13829 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
DBDEDFDM_01581 1.87e-102 aroQ 4.2.1.10 - E ko:K03786 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes a trans-dehydration via an enolate intermediate
DBDEDFDM_01582 2.14e-21 - - - - - - - -
DBDEDFDM_01583 3.46e-154 - - - K - - - helix_turn_helix, Lux Regulon
DBDEDFDM_01584 1.02e-05 srtA 3.4.22.70 - M ko:K07284 - ko00000,ko01000,ko01002,ko01011 Sortase (surface protein transpeptidase)
DBDEDFDM_01585 0.0 pyrG 6.3.4.2 - F ko:K01937 ko00240,ko01100,map00240,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
DBDEDFDM_01586 0.0 sufB - - O ko:K09014 - ko00000 FeS assembly protein SufB
DBDEDFDM_01587 1.45e-298 sufD - - O ko:K09015 - ko00000 FeS assembly protein SufD
DBDEDFDM_01588 2.13e-185 sufC - - O ko:K09013 - ko00000,ko02000 FeS assembly ATPase SufC
DBDEDFDM_01589 9.94e-304 sufS 2.8.1.7, 4.4.1.16 - E ko:K11717 ko00450,ko01100,map00450,map01100 ko00000,ko00001,ko01000 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DBDEDFDM_01590 4.14e-132 iscU - - C ko:K04488 - ko00000 SUF system FeS assembly protein, NifU family
DBDEDFDM_01591 2.56e-141 - - - S - - - Iron-sulfur cluster assembly protein
DBDEDFDM_01592 1.42e-308 glgC 2.7.7.27 - H ko:K00975 ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026 ko00000,ko00001,ko00002,ko01000 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
DBDEDFDM_01593 1.78e-208 spoU2 - - J - - - SpoU rRNA Methylase family
DBDEDFDM_01595 2.18e-175 - 2.1.1.193 - J ko:K09761 - ko00000,ko01000,ko03009 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
DBDEDFDM_01596 1.37e-76 hit - - FG ko:K02503 - ko00000,ko04147 Scavenger mRNA decapping enzyme C-term binding
DBDEDFDM_01597 1.49e-253 phoH - - T ko:K06217 - ko00000 PhoH-like protein
DBDEDFDM_01598 1.82e-130 ybeY - - S ko:K07042 - ko00000,ko03009 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
DBDEDFDM_01599 0.0 corC - - S - - - CBS domain
DBDEDFDM_01600 1.96e-236 era - - S ko:K03595 - ko00000,ko03009,ko03029 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
DBDEDFDM_01601 1.23e-120 fadD2 6.2.1.3 - I ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 AMP-binding enzyme
DBDEDFDM_01602 4.1e-75 glxK 2.7.1.165 - G ko:K00865 ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130 ko00000,ko00001,ko01000 Belongs to the glycerate kinase type-1 family
DBDEDFDM_01603 0.0 nox - - C - - - Pyridine nucleotide-disulphide oxidoreductase
DBDEDFDM_01604 2.92e-298 metC1 4.4.1.8 - E ko:K01760 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 ko00000,ko00001,ko00002,ko01000 Cys/Met metabolism PLP-dependent enzyme
DBDEDFDM_01605 1.81e-310 - 2.5.1.49 - E ko:K01740 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 Cys/Met metabolism PLP-dependent enzyme
DBDEDFDM_01606 4.35e-179 hflK - - O - - - prohibitin homologues
DBDEDFDM_01607 0.0 aldH 1.2.1.3, 1.2.99.10 - C ko:K00128,ko:K22445 ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130 ko00000,ko00001,ko00002,ko01000 Aldehyde dehydrogenase family
DBDEDFDM_01608 2.38e-73 - - - S ko:K08972 - ko00000 Mycobacterial 4 TMS phage holin, superfamily IV
DBDEDFDM_01609 0.0 ileS 6.1.1.5 - J ko:K01870 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
DBDEDFDM_01611 0.0 - 3.2.1.51 GH29 G ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 Alpha-L-fucosidase
DBDEDFDM_01612 1.47e-22 - - - EH - - - D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
DBDEDFDM_01613 2.17e-243 - - - K - - - Periplasmic binding protein domain
DBDEDFDM_01614 1.79e-161 - - - G ko:K02026 - ko00000,ko00002,ko02000 ABC transporter permease
DBDEDFDM_01615 0.0 bga1 3.2.1.23 - G ko:K12308 ko00052,map00052 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 8.87
DBDEDFDM_01616 3.29e-82 - - - G ko:K02027 - ko00000,ko00002,ko02000 carbohydrate transport
DBDEDFDM_01617 0.0 - - - G ko:K02027 - ko00000,ko00002,ko02000 Bacterial extracellular solute-binding protein
DBDEDFDM_01618 2.65e-184 coaX 2.7.1.33 - H ko:K03525 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
DBDEDFDM_01620 3.7e-172 - - - L - - - Phage integrase family
DBDEDFDM_01621 9.85e-140 pepE 3.4.13.21 - E ko:K05995 - ko00000,ko01000,ko01002 Peptidase family S51
DBDEDFDM_01622 0.0 aroA 2.5.1.19 - E ko:K00800 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
DBDEDFDM_01623 1.39e-296 ackA 2.7.2.1 - H ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DBDEDFDM_01624 0.0 pta 2.3.1.8 - C ko:K13788 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 phosphate acetyltransferase
DBDEDFDM_01625 7.56e-93 - - - S - - - Domain of unknown function (DUF1846)
DBDEDFDM_01626 2.71e-101 - - - - - - - -
DBDEDFDM_01628 0.0 guaA 6.3.5.2 - F ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko01002 Catalyzes the synthesis of GMP from XMP
DBDEDFDM_01629 0.0 xfp 4.1.2.22, 4.1.2.9 - G ko:K01621 ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120 ko00000,ko00001,ko01000 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
DBDEDFDM_01630 1.85e-243 pitB - - P ko:K03306 - ko00000 Phosphate transporter family
DBDEDFDM_01631 4.91e-150 - - - P ko:K07220 - ko00000 Protein of unknown function DUF47
DBDEDFDM_01632 1.78e-137 - - - K - - - helix_turn_helix, Lux Regulon
DBDEDFDM_01633 8.41e-298 - - - T - - - Histidine kinase
DBDEDFDM_01634 4.33e-57 pacL 3.6.3.8, 3.6.3.9 - P ko:K01537,ko:K01539 ko04022,ko04024,ko04260,ko04261,ko04911,ko04918,ko04919,ko04925,ko04960,ko04961,ko04964,ko04970,ko04971,ko04972,ko04973,ko04974,ko04976,ko04978,map04022,map04024,map04260,map04261,map04911,map04918,map04919,map04925,map04960,map04961,map04964,map04970,map04971,map04972,map04973,map04974,map04976,map04978 ko00000,ko00001,ko01000,ko04147 ATPase, P-type transporting, HAD superfamily, subfamily IC
DBDEDFDM_01635 8.78e-238 - - - V ko:K01990 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
DBDEDFDM_01636 2.77e-290 - - - V ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
DBDEDFDM_01637 5.44e-313 - - - V ko:K01992 - ko00000,ko00002,ko02000 ABC-2 family transporter protein
DBDEDFDM_01638 0.0 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
DBDEDFDM_01640 2.56e-219 - - - L - - - NIF3 (NGG1p interacting factor 3)
DBDEDFDM_01641 0.0 polA 2.7.7.7 - L ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 ko00000,ko00001,ko01000,ko03032,ko03400 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DBDEDFDM_01642 5.44e-161 pdtaR - - T ko:K22010 - ko00000,ko00002,ko02022 Response regulator receiver domain protein
DBDEDFDM_01644 4.7e-140 aspA 3.6.1.13 - L ko:K01515 ko00230,map00230 ko00000,ko00001,ko01000 NUDIX domain
DBDEDFDM_01645 0.0 pyk 2.7.1.40 - G ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Pyruvate kinase
DBDEDFDM_01646 3.96e-228 terC - - P ko:K05794 - ko00000 Integral membrane protein, TerC family
DBDEDFDM_01647 0.0 uvrB - - L ko:K03702 ko03420,map03420 ko00000,ko00001,ko03400 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
DBDEDFDM_01648 6.87e-85 coaE 2.7.1.24 - H ko:K00859 ko00770,ko01100,map00770,map01100 ko00000,ko00001,ko00002,ko01000 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DBDEDFDM_01649 6.17e-303 rpsA - - J ko:K02945 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Ribosomal protein S1
DBDEDFDM_01650 2.97e-211 folD 1.5.1.5, 3.5.4.9 - F ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 ko00000,ko00001,ko00002,ko01000 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
DBDEDFDM_01651 1.97e-230 - - - P ko:K02077 - ko00000,ko00002,ko02000 Zinc-uptake complex component A periplasmic
DBDEDFDM_01652 1.15e-209 - - - P ko:K02074 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
DBDEDFDM_01653 2.15e-177 znuB - - U ko:K02075 - ko00000,ko00002,ko02000 ABC 3 transport family
DBDEDFDM_01654 8.94e-109 ispF 2.7.7.60, 4.6.1.12 - H ko:K01770,ko:K12506 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
DBDEDFDM_01655 1.99e-131 carD - - K ko:K07736 - ko00000,ko03000 CarD-like/TRCF domain
DBDEDFDM_01658 0.0 glgB 2.4.1.18 CBM48,GH13 G ko:K00700 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
DBDEDFDM_01659 9.32e-164 cseB - - T - - - Response regulator receiver domain protein
DBDEDFDM_01660 1.69e-258 - - - T - - - ATPase histidine kinase DNA gyrase B HSP90 domain protein
DBDEDFDM_01661 3.2e-93 umuD - - KT ko:K03503 - ko00000,ko01000,ko01002,ko03400 Peptidase S24-like
DBDEDFDM_01664 4.08e-70 - - - - - - - -
DBDEDFDM_01665 7.23e-85 - - - D - - - MobA/MobL family
DBDEDFDM_01666 1.49e-62 - - - L ko:K07483 - ko00000 Transposase
DBDEDFDM_01667 6.61e-229 tnp3521a2 - - L - - - Integrase core domain
DBDEDFDM_01668 5.58e-33 - - - S - - - Adenine-specific methyltransferase EcoRI
DBDEDFDM_01669 5.67e-48 - - - - - - - -
DBDEDFDM_01670 1.71e-144 pncA 3.5.1.19 - Q ko:K08281 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 Isochorismatase family
DBDEDFDM_01672 8.63e-56 glmS 2.6.1.16 - M ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 ko00000,ko00001,ko01000,ko01002 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
DBDEDFDM_01674 4.79e-307 pbuX - - F ko:K03458 - ko00000 Permease family
DBDEDFDM_01675 2.18e-137 xpt 2.4.2.22 - F ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 ko00000,ko00001,ko01000 Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
DBDEDFDM_01676 0.0 yrhL - - I - - - Psort location CytoplasmicMembrane, score 9.99
DBDEDFDM_01677 0.0 pcrA 3.6.4.12 - L ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 DNA helicase
DBDEDFDM_01678 2.46e-84 - - - S - - - Domain of unknown function (DUF4418)
DBDEDFDM_01679 2.66e-271 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
DBDEDFDM_01680 2.83e-174 - - - V ko:K02003 - ko00000,ko00002,ko02000 ABC transporter
DBDEDFDM_01681 1.83e-141 rpsD - - J ko:K02986 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
DBDEDFDM_01682 0.0 - - - I - - - Psort location CytoplasmicMembrane, score 9.99
DBDEDFDM_01683 4.24e-173 - 5.4.2.12 - G ko:K15634 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Phosphoglycerate mutase family
DBDEDFDM_01684 4.03e-85 - - - S - - - Bacterial protein of unknown function (DUF948)
DBDEDFDM_01685 7.33e-50 - - - - - - - -
DBDEDFDM_01687 1.04e-244 - - - M - - - Glycosyltransferase like family 2
DBDEDFDM_01688 0.0 - - - M ko:K07272 - ko00000,ko01000,ko01003,ko01005 Rhamnan synthesis protein F
DBDEDFDM_01689 0.0 - - - S - - - Tetratricopeptide repeat
DBDEDFDM_01690 2.18e-266 - - - GM ko:K01990 - ko00000,ko00002,ko02000 ABC transporter, ATP-binding protein
DBDEDFDM_01691 2.65e-179 tagG - - U ko:K01992 - ko00000,ko00002,ko02000 Transport permease protein
DBDEDFDM_01692 1.48e-214 rfbA 2.7.7.24 - H ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
DBDEDFDM_01693 4.62e-200 - - - L - - - Transposase, Mutator family
DBDEDFDM_01694 9.53e-136 - - - L - - - PFAM Integrase catalytic
DBDEDFDM_01695 9.39e-170 - - - L - - - transposase activity
DBDEDFDM_01696 3.84e-30 - - - L ko:K07483 - ko00000 Transposase
DBDEDFDM_01697 5.01e-61 - - - L - - - Transposase DDE domain
DBDEDFDM_01698 0.0 rfbD 1.1.1.133, 5.1.3.13 - M ko:K00067,ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
DBDEDFDM_01699 0.0 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative DNA-binding domain
DBDEDFDM_01700 3.83e-259 rfbB 4.2.1.46 - M ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
DBDEDFDM_01701 0.0 - - - - - - - -
DBDEDFDM_01702 4.79e-220 - - - M - - - Glycosyl transferase family 2
DBDEDFDM_01703 0.0 - - - M - - - Glycosyl hydrolases family 25
DBDEDFDM_01704 1.03e-141 - - - - - - - -
DBDEDFDM_01705 1.83e-244 cbs 2.5.1.47, 4.2.1.22 - E ko:K01697,ko:K01738 ko00260,ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Pyridoxal-phosphate dependent enzyme
DBDEDFDM_01706 2.43e-283 metB 2.5.1.48 - E ko:K01739 ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Cys/Met metabolism PLP-dependent enzyme
DBDEDFDM_01707 0.0 recQ 3.6.4.12 - L ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 ATP-dependent DNA helicase RecQ
DBDEDFDM_01708 1.81e-118 luxS 4.4.1.21 - H ko:K07173 ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111 ko00000,ko00001,ko00002,ko01000 Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
DBDEDFDM_01710 2.63e-121 cysE - - J - - - COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DBDEDFDM_01711 0.0 aap1 - - E ko:K03294 - ko00000 aromatic amino acid transport protein AroP K03293
DBDEDFDM_01712 0.0 alr 5.1.1.1 - M ko:K01775 ko00473,ko01100,ko01502,map00473,map01100,map01502 ko00000,ko00001,ko01000,ko01011 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DBDEDFDM_01713 3.55e-313 dgt 3.1.5.1 - F ko:K01129 ko00230,map00230 ko00000,ko00001,ko01000 Phosphohydrolase-associated domain
DBDEDFDM_01714 0.0 dnaG - - L ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
DBDEDFDM_01715 2.73e-206 - - - K - - - Helix-turn-helix domain, rpiR family
DBDEDFDM_01716 4.27e-293 - 3.6.4.12 - K ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Putative ATP-dependent DNA helicase recG C-terminal
DBDEDFDM_01717 2.37e-58 - - - S ko:K06990 - ko00000,ko04812 Memo-like protein
DBDEDFDM_01719 0.0 dxs 2.2.1.7 - H ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 ko00000,ko00001,ko00002,ko01000 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
DBDEDFDM_01720 8.13e-75 - - - EGP ko:K08369 - ko00000,ko02000 Major facilitator Superfamily
DBDEDFDM_01721 1.03e-242 - - - M - - - Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
DBDEDFDM_01722 0.0 hrpA 3.6.4.13 - L ko:K03578 - ko00000,ko01000 Helicase associated domain (HA2) Add an annotation
DBDEDFDM_01723 5.07e-157 rsmC 2.1.1.172 - J ko:K00564 - ko00000,ko01000,ko03009 Ribosomal protein L11 methyltransferase (PrmA)
DBDEDFDM_01724 4.62e-224 - - - - - - - -
DBDEDFDM_01725 0.0 hflX - - S ko:K03665 - ko00000,ko03009 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DBDEDFDM_01726 1.96e-226 ldh 1.1.1.27, 1.1.1.37 - C ko:K00016,ko:K00024 ko00010,ko00020,ko00270,ko00620,ko00630,ko00640,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04922,map00010,map00020,map00270,map00620,map00630,map00640,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200,map04922 ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the LDH MDH superfamily. LDH family
DBDEDFDM_01727 3.88e-213 czcD - - P ko:K16264 - ko00000,ko02000 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DBDEDFDM_01728 3.03e-166 lexA 3.4.21.88 - K ko:K01356 - ko00000,ko00002,ko01000,ko01002,ko03400 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DBDEDFDM_01729 1.69e-65 - - - M - - - Lysin motif
DBDEDFDM_01730 2.55e-107 nrdR - - K ko:K07738 - ko00000,ko03000 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
DBDEDFDM_01731 3.23e-290 serA 1.1.1.399, 1.1.1.95 - EH ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000,ko04147 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
DBDEDFDM_01732 0.0 - - - L - - - DNA helicase
DBDEDFDM_01733 8.85e-118 mraZ - - K ko:K03925 - ko00000 Belongs to the MraZ family
DBDEDFDM_01734 3.99e-258 rsmH 2.1.1.199 - J ko:K03438 - ko00000,ko01000,ko03009 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
DBDEDFDM_01736 0.0 ctpE - - P ko:K12952 - ko00000,ko01000 E1-E2 ATPase
DBDEDFDM_01737 5.73e-143 - - - - - - - -
DBDEDFDM_01738 1.57e-139 rumA 2.1.1.190 - J ko:K03215 - ko00000,ko01000,ko03009 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DBDEDFDM_01739 6.3e-128 rumA 2.1.1.190 - J ko:K03215 - ko00000,ko01000,ko03009 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DBDEDFDM_01740 3.1e-171 - - - S - - - Protein of unknown function (DUF3159)
DBDEDFDM_01741 2.66e-196 - - - S - - - Protein of unknown function (DUF3710)
DBDEDFDM_01742 2.02e-215 xth 3.1.11.2 - L ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Endonuclease/Exonuclease/phosphatase family
DBDEDFDM_01743 0.0 - 3.4.22.40 - E ko:K01372 - ko00000,ko01000,ko01002 Peptidase C1-like family
DBDEDFDM_01744 0.0 oppA - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Bacterial extracellular solute-binding proteins, family 5 Middle
DBDEDFDM_01745 0.0 oppD - - P ko:K02031,ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Belongs to the ABC transporter superfamily
DBDEDFDM_01746 5.29e-212 oppC - - EP ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 N-terminal TM domain of oligopeptide transport permease C
DBDEDFDM_01747 4.8e-226 oppB1 - - EP ko:K02033 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
DBDEDFDM_01748 4.74e-236 xerC - - D ko:K03733,ko:K04763 - ko00000,ko03036 Belongs to the 'phage' integrase family. XerC subfamily
DBDEDFDM_01749 1.15e-158 - - - S - - - Psort location Cytoplasmic, score 8.87
DBDEDFDM_01750 1.3e-36 - - - L - - - Transposase
DBDEDFDM_01752 8.27e-191 - - - S ko:K07090 - ko00000 Sulfite exporter TauE/SafE
DBDEDFDM_01753 9.48e-157 - - - V ko:K02004 - ko00000,ko00002,ko02000 FtsX-like permease family
DBDEDFDM_01755 4.1e-209 - - - EG - - - EamA-like transporter family
DBDEDFDM_01756 0.0 - - - JKL - - - helicase superfamily c-terminal domain
DBDEDFDM_01757 3.23e-188 - 3.5.2.6 - V ko:K17836 ko00311,ko01130,ko01501,map00311,map01130,map01501 ko00000,ko00001,ko00002,ko01000,ko01504 Beta-lactamase enzyme family
DBDEDFDM_01758 9.28e-218 - 5.1.3.15 - G ko:K01792 ko00010,ko01100,ko01110,ko01120,ko01130,map00010,map01100,map01110,map01120,map01130 ko00000,ko00001,ko01000 Aldose 1-epimerase
DBDEDFDM_01759 1.3e-211 - - - L - - - Psort location Cytoplasmic, score
DBDEDFDM_01760 3.08e-47 - - - S - - - Domain of unknown function (DUF5348)
DBDEDFDM_01761 2.86e-91 - - - S - - - Protein of unknown function (DUF3801)
DBDEDFDM_01762 0.0 - - - U ko:K03205 ko03070,map03070 ko00000,ko00001,ko00002,ko02044 Type IV secretory system Conjugative DNA transfer
DBDEDFDM_01763 3.49e-27 - - - S - - - Maff2 family
DBDEDFDM_01764 0.0 - - - J ko:K18220 - br01600,ko00000,ko01504 elongation factor G
DBDEDFDM_01766 0.0 - - - V ko:K02003,ko:K02004 - ko00000,ko00002,ko02000 ATPases associated with a variety of cellular activities
DBDEDFDM_01767 0.0 - - - P ko:K12952 - ko00000,ko01000 E1-E2 ATPase
DBDEDFDM_01768 6.98e-72 - - - K - - - MerR, DNA binding
DBDEDFDM_01769 6.04e-249 - - - C ko:K19265 - ko00000,ko01000 Aldo/keto reductase family
DBDEDFDM_01770 2.92e-131 - 2.7.7.7 - L ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Exonuclease, DNA polymerase III, epsilon subunit family
DBDEDFDM_01771 0.0 gltA 2.3.3.1 - C ko:K01647 ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230 br01601,ko00000,ko00001,ko00002,ko01000 Citrate synthase, C-terminal domain
DBDEDFDM_01772 5.08e-191 map 3.4.11.18 - E ko:K01265 - ko00000,ko01000,ko01002 Methionine aminopeptidase
DBDEDFDM_01773 4.2e-191 - - - S - - - Short repeat of unknown function (DUF308)
DBDEDFDM_01775 1.15e-155 ssb2 - - L ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Single-strand binding protein family
DBDEDFDM_01776 8.98e-147 - - - - - - - -
DBDEDFDM_01777 0.0 proS 6.1.1.15 - J ko:K01881 ko00970,map00970 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
DBDEDFDM_01778 0.0 - - - L - - - PIF1-like helicase
DBDEDFDM_01779 8.15e-205 - - - S - - - Sucrose-6F-phosphate phosphohydrolase
DBDEDFDM_01780 1.84e-154 orn - - L ko:K13288 ko03008,map03008 ko00000,ko00001,ko01000,ko03009,ko03019 3'-to-5' exoribonuclease specific for small oligoribonucleotides
DBDEDFDM_01781 5.3e-73 - - - KT ko:K02483 - ko00000,ko02022 Transcriptional regulatory protein, C terminal
DBDEDFDM_01782 0.0 - 3.2.1.20 GH31 G ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 ko00000,ko00001,ko01000 Alpha-amylase domain
DBDEDFDM_01783 0.0 guaB 1.1.1.205 - F ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 ko00000,ko00001,ko00002,ko01000,ko04147 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
DBDEDFDM_01784 1.5e-260 rfe 2.7.8.33, 2.7.8.35 - M ko:K02851 - ko00000,ko01000,ko01003,ko01005 Glycosyl transferase family 4
DBDEDFDM_01785 1.32e-15 - - - S - - - Tetratricopeptide repeat
DBDEDFDM_01786 0.0 ligA 6.5.1.2 - L ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 ko00000,ko00001,ko01000,ko03032,ko03400 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
DBDEDFDM_01787 2.75e-268 mrp - - D ko:K03593 - ko00000,ko03029,ko03036 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
DBDEDFDM_01788 1e-203 - - - S - - - Protein conserved in bacteria
DBDEDFDM_01789 0.0 glnA 6.3.1.2 - E ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 ko00000,ko00001,ko01000,ko04147 glutamine synthetase
DBDEDFDM_01790 9.65e-179 - - - S - - - Domain of unknown function (DUF4191)
DBDEDFDM_01791 0.0 lpdA 1.8.1.4 - C ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DBDEDFDM_01792 2.07e-134 - - - S - - - Protein of unknown function (DUF3043)
DBDEDFDM_01793 0.0 argE - - E - - - Peptidase dimerisation domain
DBDEDFDM_01794 7.24e-164 - - - S - - - Metallo-beta-lactamase domain protein
DBDEDFDM_01795 1.52e-145 - - - - - - - -
DBDEDFDM_01796 0.0 cfa 2.1.1.79 - M ko:K00574 - ko00000,ko01000 Mycolic acid cyclopropane synthetase
DBDEDFDM_01797 5.74e-241 iolG 1.1.1.18, 1.1.1.369 - S ko:K00010 ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130 ko00000,ko00001,ko01000 Oxidoreductase family, C-terminal alpha/beta domain
DBDEDFDM_01798 2.74e-209 - - - G ko:K05340 - ko00000,ko02000 Sugar transport protein
DBDEDFDM_01799 4.61e-250 - - - K ko:K13633 - ko00000,ko03000 helix_turn_helix, arabinose operon control protein
DBDEDFDM_01801 1.85e-48 rpmE - - J ko:K02909 ko03010,map03010 br01610,ko00000,ko00001,ko00002,ko03011 Binds the 23S rRNA
DBDEDFDM_01802 1.17e-246 prfA - - J ko:K02835 - ko00000,ko03012 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
DBDEDFDM_01803 8.44e-237 prmC 2.1.1.297 - J ko:K02493 - ko00000,ko01000,ko03012 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
DBDEDFDM_01804 8.39e-73 - 2.3.1.79 - S ko:K00661 - ko00000,ko01000 Bacterial transferase hexapeptide repeat protein
DBDEDFDM_01806 2.18e-170 - - - S - - - Type I phosphodiesterase / nucleotide pyrophosphatase
DBDEDFDM_01807 6.71e-241 - - - S - - - Protein of unknown function (DUF3071)
DBDEDFDM_01808 2.45e-63 - - - S - - - Domain of unknown function (DUF4193)
DBDEDFDM_01809 3.53e-110 dut 3.6.1.23 - F ko:K01520 ko00240,ko00983,ko01100,map00240,map00983,map01100 ko00000,ko00001,ko00002,ko01000,ko03400 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
DBDEDFDM_01810 0.0 relA 2.7.6.5, 3.1.7.2 - KT ko:K00951,ko:K01139 ko00230,map00230 ko00000,ko00001,ko01000,ko03009 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DBDEDFDM_01812 7.55e-293 intA - - L - - - Phage integrase family
DBDEDFDM_01813 3.33e-166 fic - - D ko:K04095 - ko00000,ko03036 Fic/DOC family
DBDEDFDM_01814 1.3e-36 - - - - - - - -
DBDEDFDM_01815 2.27e-36 - - - L - - - DNA integration
DBDEDFDM_01818 4.9e-264 - 2.7.1.162 - S ko:K13059 - ko00000,ko01000 Phosphotransferase enzyme family
DBDEDFDM_01819 0.0 galT 2.7.7.12 - G ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 ko00000,ko00001,ko00002,ko01000 UDP-glucose--hexose-1-phosphate uridylyltransferase
DBDEDFDM_01820 4.81e-253 galE 5.1.3.2 - M ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 ko00000,ko00001,ko00002,ko01000 Belongs to the NAD(P)-dependent epimerase dehydratase family
DBDEDFDM_01821 0.0 ybiT - - S ko:K06158 - ko00000,ko03012 ABC transporter
DBDEDFDM_01822 1.39e-179 - 3.4.17.14 - M ko:K07260 ko00550,ko01100,ko01502,ko02020,map00550,map01100,map01502,map02020 ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504 D-alanyl-D-alanine carboxypeptidase
DBDEDFDM_01823 1.01e-204 - 2.7.13.3 - T ko:K18351 ko01502,ko02020,map01502,map02020 ko00000,ko00001,ko00002,ko01000,ko01001,ko01504,ko02022 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DBDEDFDM_01826 0.0 - - - M - - - 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
DBDEDFDM_01827 5.47e-98 - 2.8.2.22 - S ko:K01023 - ko00000,ko01000 Arylsulfotransferase Ig-like domain
DBDEDFDM_01828 5.17e-177 - - - P ko:K16784 ko02010,map02010 ko00000,ko00001,ko00002,ko01000,ko02000 ATPases associated with a variety of cellular activities
DBDEDFDM_01829 5.69e-54 - - - E - - - Aminotransferase class I and II
DBDEDFDM_01830 9.34e-314 - - - E ko:K02035 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ABC transporter, substrate-binding protein, family 5
DBDEDFDM_01831 1.72e-218 - - - P ko:K02033 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
DBDEDFDM_01832 3.03e-209 - - - EP ko:K02034 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 Binding-protein-dependent transport system inner membrane component
DBDEDFDM_01833 2.67e-181 - - - EP ko:K02031 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 oligopeptide transport protein of the ABC superfamily, ATP-binding component
DBDEDFDM_01834 4.13e-195 - - - E ko:K02032 ko02024,map02024 ko00000,ko00001,ko00002,ko02000 ATPases associated with a variety of cellular activities
DBDEDFDM_01835 8.82e-241 pdxB - - EH - - - Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DBDEDFDM_01836 1.66e-128 ctc - - J ko:K02897 ko03010,map03010 ko00000,ko00001,ko00002,ko03011 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
DBDEDFDM_01837 4.21e-242 - - - S ko:K06889 - ko00000 alpha beta
DBDEDFDM_01838 1.16e-304 pntB 1.6.1.2 - C ko:K00325 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
DBDEDFDM_01839 1.08e-58 pntAB 1.6.1.2 - C ko:K00324 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 4TM region of pyridine nucleotide transhydrogenase, mitoch
DBDEDFDM_01840 3.99e-258 pntA 1.6.1.2 - C ko:K00324 ko00760,ko01100,map00760,map01100 ko00000,ko00001,ko01000 NAD(P) transhydrogenase subunit alpha part 1 K00324
DBDEDFDM_01841 0.0 lhr - - L ko:K03724 - ko00000,ko01000,ko03400 DEAD DEAH box helicase
DBDEDFDM_01842 0.0 gyrA2 5.99.1.3 - L ko:K02469 - ko00000,ko01000,ko03032,ko03400 DNA topoisomerase (ATP-hydrolyzing)
DBDEDFDM_01846 1.7e-185 cobB2 - - K ko:K12410 - ko00000,ko01000 Sir2 family
DBDEDFDM_01847 2.67e-296 ilvA 4.3.1.19 - E ko:K01754 ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230 ko00000,ko00001,ko00002,ko01000 Pyridoxal-phosphate dependent enzyme
DBDEDFDM_01848 1.12e-109 tadA 3.5.4.1, 3.5.4.33 - FJ ko:K01485,ko:K11991 ko00240,ko00330,ko01100,map00240,map00330,map01100 ko00000,ko00001,ko01000,ko03016 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
DBDEDFDM_01849 5.73e-216 - - - - - - - -
DBDEDFDM_01850 0.0 glgX 3.2.1.68 CBM48,GH13 G ko:K01214 ko00500,ko01100,ko01110,map00500,map01100,map01110 ko00000,ko00001,ko00002,ko01000 Belongs to the glycosyl hydrolase 13 family
DBDEDFDM_01851 2.72e-83 pip 3.4.11.5 - S ko:K01259 ko00330,map00330 ko00000,ko00001,ko01000,ko01002 alpha/beta hydrolase fold
DBDEDFDM_01852 1.05e-183 proC 1.5.1.2 - E ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 ko00000,ko00001,ko00002,ko01000 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DBDEDFDM_01853 1.71e-212 iaaA 3.4.19.5 - E ko:K13051 - ko00000,ko01000,ko01002 Asparaginase
DBDEDFDM_01854 2.26e-314 - - - L - - - Transposase
DBDEDFDM_01855 0.0 - 2.5.1.49 - H ko:K01740 ko00270,ko01100,map00270,map01100 ko00000,ko00001,ko01000 Psort location Cytoplasmic, score 9.98
DBDEDFDM_01856 5.39e-23 gnpA 2.4.1.211 - S ko:K15533 - ko00000,ko01000 Lacto-N-biose phosphorylase C-terminal domain
DBDEDFDM_01857 1.69e-228 - 2.7.1.2 - GK ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 ko00000,ko00001,ko00002,ko01000 ROK family
DBDEDFDM_01858 5.8e-80 - - - GK - - - ROK family
DBDEDFDM_01859 1.93e-202 - 2.7.1.95 - F ko:K00897 - ko00000,ko01000,ko01504 Phosphotransferase enzyme family

eggNOG-mapper v2.1.12 (Database: eggNOG v5.0.2, Mar. 2021 release)